Query 001103
Match_columns 1157
No_of_seqs 413 out of 2613
Neff 4.1
Searched_HMMs 46136
Date Thu Mar 28 15:54:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001103.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001103hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0615 Serine/threonine prote 100.0 2.9E-48 6.2E-53 432.9 15.7 269 873-1146 170-444 (475)
2 KOG0581 Mitogen-activated prot 100.0 1.1E-46 2.4E-51 416.9 21.3 258 872-1146 76-342 (364)
3 KOG0192 Tyrosine kinase specif 100.0 1.7E-45 3.8E-50 414.3 26.2 271 869-1150 35-310 (362)
4 KOG0575 Polo-like serine/threo 100.0 2.1E-45 4.5E-50 424.7 24.4 252 875-1142 18-272 (592)
5 KOG0598 Ribosomal protein S6 k 100.0 1.1E-45 2.3E-50 408.8 20.6 257 872-1143 22-285 (357)
6 KOG0595 Serine/threonine-prote 100.0 2.7E-44 5.8E-49 401.3 22.0 256 874-1140 9-269 (429)
7 KOG0592 3-phosphoinositide-dep 100.0 7.3E-44 1.6E-48 407.3 18.6 258 872-1145 70-344 (604)
8 KOG0583 Serine/threonine prote 100.0 2E-42 4.2E-47 390.3 25.8 259 873-1144 15-280 (370)
9 KOG0616 cAMP-dependent protein 100.0 9.1E-43 2E-47 377.4 18.3 256 872-1145 41-303 (355)
10 KOG0694 Serine/threonine prote 100.0 3.7E-42 8E-47 401.5 23.8 254 871-1141 364-626 (694)
11 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.4E-41 3.1E-46 367.9 25.5 262 870-1145 2-336 (338)
12 KOG0591 NIMA (never in mitosis 100.0 9.8E-44 2.1E-48 382.8 7.7 256 874-1141 18-283 (375)
13 PHA02988 hypothetical protein; 100.0 4E-41 8.6E-46 359.1 26.2 263 871-1145 14-281 (283)
14 KOG0198 MEKK and related serin 100.0 3.7E-42 8E-47 380.7 18.8 257 875-1144 17-281 (313)
15 KOG0605 NDR and related serine 100.0 5.3E-42 1.1E-46 392.1 20.1 261 871-1146 137-452 (550)
16 cd05612 STKc_PRKX_like Catalyt 100.0 3.3E-41 7.2E-46 359.2 22.3 251 875-1143 1-258 (291)
17 KOG0593 Predicted protein kina 100.0 4.1E-42 9E-47 373.0 14.6 254 875-1142 2-287 (396)
18 KOG0197 Tyrosine kinases [Sign 100.0 1.4E-41 3.1E-46 388.6 18.8 260 869-1146 200-464 (468)
19 cd05631 STKc_GRK4 Catalytic do 100.0 1.9E-40 4.1E-45 351.8 25.5 255 876-1143 1-265 (285)
20 PTZ00263 protein kinase A cata 100.0 6.5E-41 1.4E-45 364.6 22.2 252 873-1142 16-274 (329)
21 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.6E-40 3.4E-45 360.4 23.2 253 875-1143 1-261 (333)
22 KOG0588 Serine/threonine prote 100.0 2.8E-41 6E-46 392.1 18.3 255 875-1144 12-268 (786)
23 KOG0585 Ca2+/calmodulin-depend 100.0 3.1E-41 6.8E-46 381.2 18.1 266 874-1145 96-378 (576)
24 cd05571 STKc_PKB Catalytic dom 100.0 8.2E-41 1.8E-45 362.4 20.7 246 881-1142 1-254 (323)
25 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.8E-40 8.3E-45 350.0 24.2 253 874-1141 4-287 (288)
26 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.1E-40 2.3E-45 361.4 19.9 254 875-1143 1-289 (350)
27 KOG0661 MAPK related serine/th 100.0 9E-42 1.9E-46 385.9 11.8 258 874-1145 9-297 (538)
28 KOG0611 Predicted serine/threo 100.0 2.3E-41 5E-46 375.6 14.6 253 875-1143 53-307 (668)
29 cd05628 STKc_NDR1 Catalytic do 100.0 5.4E-40 1.2E-44 362.0 24.7 253 875-1142 1-296 (363)
30 KOG0610 Putative serine/threon 100.0 8.2E-41 1.8E-45 373.8 18.0 259 870-1141 72-394 (459)
31 cd05599 STKc_NDR_like Catalyti 100.0 3E-40 6.4E-45 361.7 21.9 253 875-1142 1-299 (364)
32 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.2E-39 2.5E-44 348.0 24.8 256 874-1144 4-293 (303)
33 cd07848 STKc_CDKL5 Catalytic d 100.0 5.7E-40 1.2E-44 345.0 21.5 252 875-1141 1-286 (287)
34 KOG0600 Cdc2-related protein k 100.0 1.1E-40 2.3E-45 379.2 17.1 260 871-1142 113-403 (560)
35 cd06649 PKc_MEK2 Catalytic dom 100.0 3E-39 6.4E-44 351.4 27.5 258 872-1146 2-308 (331)
36 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.6E-39 3.5E-44 349.2 24.8 257 876-1144 1-295 (338)
37 PTZ00426 cAMP-dependent protei 100.0 5.8E-40 1.3E-44 361.3 21.6 253 872-1142 27-287 (340)
38 cd05064 PTKc_EphR_A10 Catalyti 100.0 3E-39 6.5E-44 338.1 25.9 256 872-1143 2-265 (266)
39 cd05585 STKc_YPK1_like Catalyt 100.0 6.4E-40 1.4E-44 353.2 21.3 245 883-1143 1-251 (312)
40 cd05626 STKc_LATS2 Catalytic d 100.0 1.4E-39 3.1E-44 361.3 23.9 253 876-1142 2-308 (381)
41 KOG0578 p21-activated serine/t 100.0 2.4E-40 5.2E-45 380.5 18.2 250 875-1142 273-526 (550)
42 cd05629 STKc_NDR_like_fungal C 100.0 8.4E-40 1.8E-44 361.5 21.8 253 875-1142 1-308 (377)
43 cd05595 STKc_PKB_beta Catalyti 100.0 1E-39 2.2E-44 354.5 21.8 247 881-1143 1-255 (323)
44 cd05593 STKc_PKB_gamma Catalyt 100.0 9.1E-40 2E-44 356.1 21.3 246 881-1142 1-254 (328)
45 cd07862 STKc_CDK6 Catalytic do 100.0 1.9E-39 4.2E-44 341.5 23.1 254 875-1141 1-289 (290)
46 cd05598 STKc_LATS Catalytic do 100.0 7.3E-40 1.6E-44 361.4 20.3 253 875-1142 1-304 (376)
47 cd05614 STKc_MSK2_N N-terminal 100.0 1.1E-39 2.3E-44 353.1 21.2 253 876-1142 1-270 (332)
48 cd05589 STKc_PKN Catalytic dom 100.0 2E-39 4.4E-44 351.1 22.9 249 877-1142 1-260 (324)
49 cd05096 PTKc_DDR1 Catalytic do 100.0 7.5E-39 1.6E-43 341.3 26.9 254 873-1141 3-303 (304)
50 cd05601 STKc_CRIK Catalytic do 100.0 6.8E-40 1.5E-44 354.4 19.1 257 875-1143 1-267 (330)
51 KOG4721 Serine/threonine prote 100.0 6.1E-41 1.3E-45 382.7 11.5 258 868-1149 117-374 (904)
52 cd05625 STKc_LATS1 Catalytic d 100.0 1.6E-39 3.4E-44 360.0 22.3 252 876-1142 2-308 (382)
53 KOG0193 Serine/threonine prote 100.0 6.3E-40 1.4E-44 378.5 19.7 271 868-1152 385-662 (678)
54 cd05596 STKc_ROCK Catalytic do 100.0 2.2E-39 4.7E-44 360.1 22.6 259 871-1142 39-307 (370)
55 cd05587 STKc_cPKC Catalytic do 100.0 3.3E-39 7.1E-44 349.5 23.4 251 876-1142 1-260 (324)
56 cd05584 STKc_p70S6K Catalytic 100.0 2E-39 4.4E-44 351.5 21.5 247 881-1142 2-259 (323)
57 cd05605 STKc_GRK4_like Catalyt 100.0 3.1E-39 6.8E-44 342.5 22.4 256 876-1144 1-266 (285)
58 cd05048 PTKc_Ror Catalytic Dom 100.0 4.9E-39 1.1E-43 336.6 23.5 253 874-1142 4-282 (283)
59 cd05106 PTKc_CSF-1R Catalytic 100.0 4E-39 8.6E-44 358.9 23.9 260 870-1144 33-373 (374)
60 PTZ00036 glycogen synthase kin 100.0 4.5E-39 9.7E-44 367.2 24.4 254 873-1143 64-355 (440)
61 cd05616 STKc_cPKC_beta Catalyt 100.0 4.3E-39 9.2E-44 348.4 22.9 250 876-1141 1-259 (323)
62 cd06625 STKc_MEKK3_like Cataly 100.0 1.9E-38 4.2E-43 327.3 26.5 255 875-1141 2-262 (263)
63 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.5E-38 3.2E-43 329.1 25.5 249 874-1140 3-255 (256)
64 cd05072 PTKc_Lyn Catalytic dom 100.0 1.5E-38 3.2E-43 329.3 25.3 254 871-1142 2-260 (261)
65 cd05104 PTKc_Kit Catalytic dom 100.0 5.7E-39 1.2E-43 357.3 23.8 258 871-1143 31-374 (375)
66 cd05594 STKc_PKB_alpha Catalyt 100.0 1.5E-39 3.2E-44 352.3 18.3 246 881-1142 1-255 (325)
67 PLN00034 mitogen-activated pro 100.0 4.4E-39 9.5E-44 352.9 22.2 252 875-1145 74-334 (353)
68 KOG0032 Ca2+/calmodulin-depend 100.0 6.9E-39 1.5E-43 363.1 24.4 259 874-1143 34-297 (382)
69 KOG0597 Serine-threonine prote 100.0 4.3E-40 9.4E-45 376.4 14.5 249 875-1141 2-253 (808)
70 cd05590 STKc_nPKC_eta Catalyti 100.0 3.5E-39 7.5E-44 349.9 20.9 246 881-1142 1-256 (320)
71 cd05591 STKc_nPKC_epsilon Cata 100.0 3.9E-39 8.4E-44 348.5 20.8 246 881-1142 1-257 (321)
72 cd05627 STKc_NDR2 Catalytic do 100.0 3.4E-39 7.4E-44 354.6 20.7 253 875-1142 1-296 (360)
73 cd05621 STKc_ROCK2 Catalytic d 100.0 5.5E-39 1.2E-43 357.8 22.2 259 872-1143 40-308 (370)
74 cd05108 PTKc_EGFR Catalytic do 100.0 2.3E-38 5E-43 340.6 25.9 259 871-1146 3-271 (316)
75 cd07872 STKc_PCTAIRE2 Catalyti 100.0 2.3E-38 5E-43 338.9 25.8 258 874-1146 5-293 (309)
76 cd05082 PTKc_Csk Catalytic dom 100.0 2.7E-38 5.9E-43 327.2 25.3 251 872-1142 3-255 (256)
77 cd05052 PTKc_Abl Catalytic dom 100.0 4.1E-38 9E-43 327.7 26.6 254 872-1143 3-262 (263)
78 cd07876 STKc_JNK2 Catalytic do 100.0 2.8E-38 6E-43 346.8 26.2 254 874-1143 20-319 (359)
79 cd05597 STKc_DMPK_like Catalyt 100.0 1.4E-38 3E-43 346.7 23.7 257 875-1142 1-269 (331)
80 cd05582 STKc_RSK_N N-terminal 100.0 2.4E-39 5.2E-44 349.1 17.5 245 881-1142 2-257 (318)
81 cd05622 STKc_ROCK1 Catalytic d 100.0 1.2E-38 2.6E-43 354.8 23.4 259 871-1142 39-307 (371)
82 KOG0659 Cdk activating kinase 100.0 5.4E-39 1.2E-43 344.4 19.8 255 875-1143 2-285 (318)
83 cd05033 PTKc_EphR Catalytic do 100.0 4.6E-38 1E-42 327.2 26.3 254 874-1143 3-265 (266)
84 PF00069 Pkinase: Protein kina 100.0 1E-38 2.3E-43 327.2 21.2 251 877-1141 1-259 (260)
85 cd05592 STKc_nPKC_theta_delta 100.0 8.8E-39 1.9E-43 346.2 21.6 246 881-1142 1-251 (316)
86 KOG0582 Ste20-like serine/thre 100.0 1.8E-38 3.9E-43 357.3 24.8 262 871-1145 22-299 (516)
87 cd06650 PKc_MEK1 Catalytic dom 100.0 2.6E-38 5.5E-43 345.4 24.9 257 872-1145 2-305 (333)
88 cd08228 STKc_Nek6 Catalytic do 100.0 5.6E-38 1.2E-42 325.3 26.1 257 875-1144 2-266 (267)
89 cd07863 STKc_CDK4 Catalytic do 100.0 2.4E-38 5.2E-43 332.2 23.6 253 876-1141 1-287 (288)
90 cd05588 STKc_aPKC Catalytic do 100.0 9.1E-39 2E-43 347.8 21.1 247 881-1143 1-266 (329)
91 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3.5E-38 7.5E-43 328.4 24.5 249 874-1140 3-255 (256)
92 cd05090 PTKc_Ror1 Catalytic do 100.0 5.3E-38 1.2E-42 330.2 25.8 254 873-1142 3-282 (283)
93 cd05620 STKc_nPKC_delta Cataly 100.0 1E-38 2.2E-43 345.7 20.9 246 881-1142 1-251 (316)
94 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-38 2.7E-43 344.7 21.5 246 881-1142 1-255 (318)
95 cd05109 PTKc_HER2 Catalytic do 100.0 8.8E-38 1.9E-42 327.9 27.0 258 871-1145 3-270 (279)
96 cd05575 STKc_SGK Catalytic dom 100.0 9.7E-39 2.1E-43 345.6 20.4 246 881-1142 1-254 (323)
97 cd05608 STKc_GRK1 Catalytic do 100.0 3.4E-38 7.4E-43 333.8 23.9 246 883-1143 1-261 (280)
98 cd05062 PTKc_IGF-1R Catalytic 100.0 6.5E-38 1.4E-42 328.6 25.8 254 872-1141 3-276 (277)
99 cd05068 PTKc_Frk_like Catalyti 100.0 6.8E-38 1.5E-42 325.1 25.6 253 872-1142 3-260 (261)
100 cd05623 STKc_MRCK_alpha Cataly 100.0 2E-38 4.3E-43 345.1 22.6 257 875-1142 1-269 (332)
101 cd05049 PTKc_Trk Catalytic dom 100.0 3.5E-38 7.7E-43 328.9 23.5 253 873-1141 3-279 (280)
102 KOG0589 Serine/threonine prote 100.0 3.7E-39 8.1E-44 367.0 17.5 256 875-1145 4-264 (426)
103 cd05089 PTKc_Tie1 Catalytic do 100.0 9.2E-38 2E-42 332.5 26.8 259 875-1149 2-281 (297)
104 cd08529 STKc_FA2-like Catalyti 100.0 8.1E-38 1.8E-42 320.7 25.1 250 876-1140 1-254 (256)
105 cd05624 STKc_MRCK_beta Catalyt 100.0 2.2E-38 4.7E-43 345.2 21.8 257 875-1142 1-269 (331)
106 PTZ00267 NIMA-related protein 100.0 8.8E-38 1.9E-42 359.6 28.1 248 875-1139 67-323 (478)
107 cd05039 PTKc_Csk_like Catalyti 100.0 1.4E-37 2.9E-42 321.3 26.6 251 872-1142 3-255 (256)
108 cd05093 PTKc_TrkB Catalytic do 100.0 1.2E-37 2.6E-42 329.7 26.7 258 872-1146 2-282 (288)
109 cd07874 STKc_JNK3 Catalytic do 100.0 4.6E-38 9.9E-43 344.0 24.0 254 874-1143 16-315 (355)
110 KOG0033 Ca2+/calmodulin-depend 100.0 2.8E-40 6.1E-45 351.0 6.3 260 873-1144 9-272 (355)
111 cd05059 PTKc_Tec_like Catalyti 100.0 8.2E-38 1.8E-42 324.3 24.4 249 874-1140 3-255 (256)
112 cd05615 STKc_cPKC_alpha Cataly 100.0 4.7E-38 1E-42 341.5 23.5 250 876-1141 1-259 (323)
113 cd05054 PTKc_VEGFR Catalytic d 100.0 4.6E-38 9.9E-43 345.0 23.6 262 870-1145 2-335 (337)
114 cd07875 STKc_JNK1 Catalytic do 100.0 6.2E-38 1.3E-42 344.6 24.7 254 874-1143 23-322 (364)
115 cd00192 PTKc Catalytic domain 100.0 1E-37 2.2E-42 317.9 24.5 245 881-1141 1-262 (262)
116 cd05032 PTKc_InsR_like Catalyt 100.0 1E-37 2.2E-42 325.0 25.0 254 872-1141 3-276 (277)
117 cd05619 STKc_nPKC_theta Cataly 100.0 3.2E-38 7E-43 342.3 22.0 245 881-1141 1-250 (316)
118 cd06646 STKc_MAP4K5 Catalytic 100.0 3.9E-38 8.5E-43 327.2 21.6 253 873-1140 7-266 (267)
119 cd08217 STKc_Nek2 Catalytic do 100.0 1.6E-37 3.4E-42 317.9 25.7 252 876-1140 1-263 (265)
120 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.4E-38 9.6E-43 325.0 21.8 251 875-1142 6-260 (261)
121 cd05084 PTKc_Fes Catalytic dom 100.0 1.3E-37 2.7E-42 320.8 25.1 245 881-1141 1-251 (252)
122 PF07714 Pkinase_Tyr: Protein 100.0 5.6E-38 1.2E-42 329.2 22.8 247 878-1140 2-259 (259)
123 cd05603 STKc_SGK2 Catalytic do 100.0 2E-38 4.3E-43 342.4 19.9 245 881-1141 1-253 (321)
124 cd05602 STKc_SGK1 Catalytic do 100.0 2.5E-38 5.4E-43 342.7 20.6 245 881-1141 1-253 (325)
125 cd05632 STKc_GRK5 Catalytic do 100.0 1.3E-37 2.9E-42 330.0 25.6 256 876-1144 1-266 (285)
126 PTZ00283 serine/threonine prot 100.0 1.5E-37 3.2E-42 360.8 28.1 255 874-1141 31-299 (496)
127 cd08219 STKc_Nek3 Catalytic do 100.0 1.7E-37 3.7E-42 320.3 25.2 248 876-1139 1-252 (255)
128 cd06631 STKc_YSK4 Catalytic do 100.0 1.7E-37 3.6E-42 322.2 25.2 255 876-1141 1-264 (265)
129 cd05116 PTKc_Syk Catalytic dom 100.0 1.6E-37 3.5E-42 322.2 25.2 245 882-1143 2-255 (257)
130 cd07853 STKc_NLK Catalytic dom 100.0 7.4E-38 1.6E-42 345.5 23.9 256 876-1144 1-293 (372)
131 cd05607 STKc_GRK7 Catalytic do 100.0 7.8E-38 1.7E-42 330.6 23.1 246 883-1142 1-257 (277)
132 cd05630 STKc_GRK6 Catalytic do 100.0 1.1E-37 2.5E-42 331.2 24.4 255 876-1144 1-266 (285)
133 KOG0201 Serine/threonine prote 100.0 1.1E-39 2.5E-44 366.6 9.6 250 874-1140 12-264 (467)
134 cd05035 PTKc_Axl_like Catalyti 100.0 2.1E-37 4.5E-42 320.6 25.3 254 877-1143 1-272 (273)
135 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.4E-37 5.2E-42 325.3 26.1 253 877-1144 6-282 (283)
136 cd05091 PTKc_Ror2 Catalytic do 100.0 6E-38 1.3E-42 329.1 21.4 253 874-1142 4-282 (283)
137 cd08223 STKc_Nek4 Catalytic do 100.0 3.3E-37 7.2E-42 317.1 26.3 252 876-1141 1-256 (257)
138 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.8E-37 3.8E-42 330.3 25.1 255 874-1143 5-290 (301)
139 cd05066 PTKc_EphR_A Catalytic 100.0 2.4E-37 5.2E-42 322.7 25.6 254 874-1143 3-266 (267)
140 cd07868 STKc_CDK8 Catalytic do 100.0 1.1E-37 2.4E-42 333.5 23.6 250 880-1141 6-316 (317)
141 cd05618 STKc_aPKC_iota Catalyt 100.0 3.9E-38 8.3E-43 343.5 20.4 246 881-1142 1-265 (329)
142 cd05088 PTKc_Tie2 Catalytic do 100.0 2E-37 4.3E-42 332.1 25.5 259 872-1146 4-283 (303)
143 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.1E-37 8.9E-42 323.0 27.3 256 874-1143 3-283 (284)
144 KOG0663 Protein kinase PITSLRE 100.0 1.1E-38 2.3E-43 349.8 15.9 258 875-1144 76-366 (419)
145 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 2E-37 4.3E-42 321.5 24.5 252 872-1142 3-259 (260)
146 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.7E-37 5.9E-42 324.6 25.9 256 873-1141 4-276 (277)
147 cd05094 PTKc_TrkC Catalytic do 100.0 3.1E-37 6.8E-42 326.9 26.5 259 872-1147 2-286 (291)
148 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.9E-37 4.1E-42 350.9 26.4 260 870-1144 32-398 (400)
149 cd05053 PTKc_FGFR Catalytic do 100.0 2.5E-37 5.4E-42 326.0 25.4 258 871-1144 8-292 (293)
150 cd05071 PTKc_Src Catalytic dom 100.0 2.7E-37 5.8E-42 322.8 25.4 254 872-1144 3-261 (262)
151 cd05065 PTKc_EphR_B Catalytic 100.0 3.2E-37 6.9E-42 321.4 25.8 253 875-1143 4-268 (269)
152 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.5E-37 7.7E-42 329.5 26.9 261 871-1147 14-303 (307)
153 KOG4717 Serine/threonine prote 100.0 1.3E-38 2.9E-43 360.5 16.7 254 876-1143 19-274 (864)
154 KOG0580 Serine/threonine prote 100.0 8.6E-39 1.9E-43 339.1 14.2 257 872-1144 19-278 (281)
155 cd05075 PTKc_Axl Catalytic dom 100.0 3.7E-37 8E-42 320.0 26.2 253 878-1143 2-271 (272)
156 cd05045 PTKc_RET Catalytic dom 100.0 3.3E-37 7.1E-42 326.0 26.2 254 876-1145 1-288 (290)
157 cd05604 STKc_SGK3 Catalytic do 100.0 3E-38 6.4E-43 342.1 18.5 246 881-1142 1-254 (325)
158 cd05586 STKc_Sck1_like Catalyt 100.0 2.4E-38 5.2E-43 342.9 17.7 247 883-1143 1-257 (330)
159 cd05067 PTKc_Lck_Blk Catalytic 100.0 2E-37 4.3E-42 321.4 23.8 253 871-1142 2-259 (260)
160 PHA03212 serine/threonine kina 100.0 1.8E-37 3.9E-42 349.2 25.4 248 872-1143 89-380 (391)
161 cd05617 STKc_aPKC_zeta Catalyt 100.0 8.4E-38 1.8E-42 340.0 21.9 246 881-1142 1-263 (327)
162 cd05069 PTKc_Yes Catalytic dom 100.0 3.4E-37 7.3E-42 320.4 25.4 252 872-1142 3-259 (260)
163 cd06628 STKc_MAPKKK_Byr2_like 100.0 4.1E-37 8.8E-42 318.9 26.0 255 876-1140 1-265 (267)
164 cd06652 STKc_MEKK2 Catalytic d 100.0 4.1E-37 8.9E-42 319.9 26.1 256 875-1141 2-263 (265)
165 cd06637 STKc_TNIK Catalytic do 100.0 1.2E-37 2.7E-42 323.5 22.1 254 875-1141 6-271 (272)
166 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.8E-37 3.8E-42 339.6 24.2 262 870-1145 2-341 (343)
167 cd08229 STKc_Nek7 Catalytic do 100.0 2.1E-37 4.5E-42 321.1 23.5 257 875-1144 2-266 (267)
168 PHA03209 serine/threonine kina 100.0 1.5E-37 3.3E-42 342.8 23.7 248 872-1142 63-354 (357)
169 cd05111 PTK_HER3 Pseudokinase 100.0 5.3E-37 1.1E-41 324.0 26.8 257 872-1145 4-270 (279)
170 cd05055 PTKc_PDGFR Catalytic d 100.0 3.8E-37 8.3E-42 330.3 26.1 257 872-1143 32-301 (302)
171 cd06644 STKc_STK10_LOK Catalyt 100.0 3E-37 6.5E-42 326.6 24.9 257 872-1142 9-272 (292)
172 cd05034 PTKc_Src_like Catalyti 100.0 4.8E-37 1E-41 317.4 25.5 253 872-1142 3-260 (261)
173 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.1E-37 2.4E-42 327.6 21.1 258 875-1146 1-269 (286)
174 cd06611 STKc_SLK_like Catalyti 100.0 1.5E-37 3.2E-42 325.7 21.9 256 875-1144 5-267 (280)
175 cd06651 STKc_MEKK3 Catalytic d 100.0 4.2E-37 9.1E-42 320.7 25.2 256 875-1141 2-263 (266)
176 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 8E-37 1.7E-41 315.3 27.0 257 875-1144 2-266 (267)
177 cd08221 STKc_Nek9 Catalytic do 100.0 6.1E-37 1.3E-41 315.7 26.0 251 876-1141 1-255 (256)
178 cd05112 PTKc_Itk Catalytic dom 100.0 6.7E-37 1.5E-41 315.4 26.3 249 874-1140 3-255 (256)
179 cd05092 PTKc_TrkA Catalytic do 100.0 3.9E-37 8.5E-42 324.5 25.0 253 872-1141 2-279 (280)
180 cd05115 PTKc_Zap-70 Catalytic 100.0 5.7E-37 1.2E-41 320.1 25.9 245 882-1143 2-255 (257)
181 PTZ00284 protein kinase; Provi 100.0 6.4E-37 1.4E-41 350.0 28.6 256 873-1144 127-443 (467)
182 cd05051 PTKc_DDR Catalytic dom 100.0 4.1E-37 8.9E-42 324.1 24.9 253 874-1141 4-295 (296)
183 cd06613 STKc_MAP4K3_like Catal 100.0 4.6E-37 1E-41 316.2 24.6 251 875-1139 3-260 (262)
184 cd06619 PKc_MKK5 Catalytic dom 100.0 4.8E-37 1E-41 323.7 25.1 248 875-1143 1-257 (279)
185 cd05063 PTKc_EphR_A2 Catalytic 100.0 8.3E-37 1.8E-41 317.4 26.5 255 873-1143 3-267 (268)
186 cd07861 STKc_CDK1_euk Catalyti 100.0 3.3E-37 7.1E-42 322.5 23.6 252 876-1141 1-284 (285)
187 cd08220 STKc_Nek8 Catalytic do 100.0 6.7E-37 1.5E-41 313.9 25.4 251 876-1140 1-254 (256)
188 cd05101 PTKc_FGFR2 Catalytic d 100.0 6E-37 1.3E-41 326.7 26.0 260 871-1146 11-299 (304)
189 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.5E-37 3.3E-42 337.8 21.8 255 874-1144 14-303 (343)
190 cd05040 PTKc_Ack_like Catalyti 100.0 5.7E-37 1.2E-41 316.1 24.4 245 881-1141 1-256 (257)
191 cd06632 STKc_MEKK1_plant Catal 100.0 5.5E-37 1.2E-41 314.2 24.2 254 876-1140 1-256 (258)
192 cd05056 PTKc_FAK Catalytic dom 100.0 9.6E-37 2.1E-41 318.0 26.2 256 873-1145 4-267 (270)
193 cd05061 PTKc_InsR Catalytic do 100.0 9.2E-37 2E-41 322.9 26.3 258 871-1144 2-279 (288)
194 cd06615 PKc_MEK Catalytic doma 100.0 5.6E-37 1.2E-41 329.3 24.9 260 875-1151 1-299 (308)
195 cd07832 STKc_CCRK Catalytic do 100.0 5.2E-37 1.1E-41 320.4 23.9 253 876-1142 1-285 (286)
196 cd06643 STKc_SLK Catalytic dom 100.0 4.4E-37 9.6E-42 323.1 23.4 253 877-1143 7-266 (282)
197 cd07867 STKc_CDC2L6 Catalytic 100.0 3.1E-37 6.7E-42 328.8 22.4 250 880-1141 6-316 (317)
198 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 6.5E-37 1.4E-41 322.8 24.6 256 875-1143 4-283 (284)
199 cd05073 PTKc_Hck Catalytic dom 100.0 1.4E-36 3E-41 315.9 26.6 253 871-1142 2-259 (260)
200 cd07839 STKc_CDK5 Catalytic do 100.0 3.3E-37 7.2E-42 323.0 22.1 252 876-1141 1-283 (284)
201 cd05085 PTKc_Fer Catalytic dom 100.0 1.3E-36 2.8E-41 312.3 25.8 244 882-1141 2-249 (250)
202 cd05046 PTK_CCK4 Pseudokinase 100.0 9E-37 2E-41 318.3 25.0 253 874-1141 4-274 (275)
203 cd05580 STKc_PKA Catalytic dom 100.0 8.8E-37 1.9E-41 323.4 25.3 250 875-1142 1-257 (290)
204 cd08227 PK_STRAD_alpha Pseudok 100.0 4.5E-37 9.8E-42 332.6 23.6 253 879-1143 2-311 (327)
205 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.3E-36 2.7E-41 326.8 26.8 261 871-1147 8-297 (314)
206 cd06638 STKc_myosinIIIA Cataly 100.0 8.9E-37 1.9E-41 320.1 25.0 256 873-1141 16-285 (286)
207 cd06608 STKc_myosinIII_like Ca 100.0 4.9E-37 1.1E-41 316.6 22.6 255 874-1141 5-274 (275)
208 cd05043 PTK_Ryk Pseudokinase d 100.0 1.4E-36 3E-41 318.3 26.4 260 872-1146 3-279 (280)
209 PHA03207 serine/threonine kina 100.0 7.8E-37 1.7E-41 341.6 26.1 252 873-1147 90-383 (392)
210 cd05574 STKc_phototropin_like 100.0 1.1E-36 2.5E-41 325.6 26.2 256 875-1143 1-293 (316)
211 cd05057 PTKc_EGFR_like Catalyt 100.0 1.6E-36 3.4E-41 318.5 26.6 259 871-1146 3-271 (279)
212 KOG0660 Mitogen-activated prot 100.0 7E-38 1.5E-42 346.2 17.1 257 874-1143 21-314 (359)
213 cd06645 STKc_MAP4K3 Catalytic 100.0 2.4E-37 5.3E-42 321.3 20.2 251 875-1140 9-266 (267)
214 cd05083 PTKc_Chk Catalytic dom 100.0 7.3E-37 1.6E-41 316.2 23.6 247 873-1141 4-252 (254)
215 PTZ00266 NIMA-related protein 100.0 7.3E-37 1.6E-41 376.1 27.4 266 870-1142 8-298 (1021)
216 cd06636 STKc_MAP4K4_6 Catalyti 100.0 7.2E-37 1.6E-41 320.8 23.5 254 875-1141 16-281 (282)
217 cd05107 PTKc_PDGFR_beta Cataly 100.0 8.5E-37 1.8E-41 346.0 25.9 260 870-1144 32-400 (401)
218 cd05097 PTKc_DDR_like Catalyti 100.0 7.7E-37 1.7E-41 324.5 23.9 254 873-1141 3-294 (295)
219 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.2E-36 2.7E-41 316.8 24.8 259 876-1141 2-271 (272)
220 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.2E-36 2.6E-41 317.6 24.7 253 875-1141 1-285 (286)
221 cd06612 STKc_MST1_2 Catalytic 100.0 8.2E-37 1.8E-41 313.3 22.8 249 875-1141 3-255 (256)
222 cd05058 PTKc_Met_Ron Catalytic 100.0 1.9E-36 4E-41 313.1 25.4 249 881-1144 1-260 (262)
223 KOG1026 Nerve growth factor re 100.0 9.3E-38 2E-42 371.5 17.8 266 867-1148 478-767 (774)
224 cd05047 PTKc_Tie Catalytic dom 100.0 1.7E-36 3.6E-41 317.5 25.2 247 882-1144 2-269 (270)
225 cd06609 STKc_MST3_like Catalyt 100.0 1.2E-36 2.6E-41 317.9 24.1 251 875-1143 1-255 (274)
226 KOG0194 Protein tyrosine kinas 100.0 2.1E-37 4.5E-42 357.4 19.8 267 869-1148 151-425 (474)
227 cd06617 PKc_MKK3_6 Catalytic d 100.0 1E-36 2.2E-41 318.5 23.0 257 875-1146 1-268 (283)
228 cd07831 STKc_MOK Catalytic dom 100.0 1.6E-36 3.4E-41 316.2 24.3 251 877-1141 1-281 (282)
229 cd05572 STKc_cGK_PKG Catalytic 100.0 1.8E-36 3.9E-41 314.0 24.5 247 883-1143 1-256 (262)
230 smart00219 TyrKc Tyrosine kina 100.0 1.7E-36 3.8E-41 309.8 24.0 248 877-1140 1-258 (258)
231 cd05050 PTKc_Musk Catalytic do 100.0 1.8E-36 4E-41 319.3 24.9 253 873-1141 3-287 (288)
232 KOG0658 Glycogen synthase kina 100.0 6.6E-38 1.4E-42 346.9 14.3 249 876-1141 25-308 (364)
233 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.6E-36 3.4E-41 315.7 23.7 257 874-1143 3-283 (284)
234 cd05060 PTKc_Syk_like Catalyti 100.0 2.9E-36 6.2E-41 312.3 25.4 245 881-1143 1-255 (257)
235 KOG0599 Phosphorylase kinase g 100.0 9E-38 2E-42 335.5 14.6 270 875-1151 17-295 (411)
236 cd07845 STKc_CDK10 Catalytic d 100.0 2.2E-36 4.8E-41 323.0 25.3 259 874-1144 6-295 (309)
237 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.8E-36 8.3E-41 313.2 26.4 255 875-1140 2-262 (264)
238 cd08528 STKc_Nek10 Catalytic d 100.0 2.5E-36 5.5E-41 314.0 24.9 258 876-1141 1-268 (269)
239 cd06630 STKc_MEKK1 Catalytic d 100.0 1.7E-36 3.6E-41 313.8 23.3 256 876-1141 1-266 (268)
240 cd06639 STKc_myosinIIIB Cataly 100.0 3.4E-36 7.3E-41 317.8 25.7 255 874-1141 21-289 (291)
241 cd05095 PTKc_DDR2 Catalytic do 100.0 2.6E-36 5.7E-41 320.6 25.1 253 874-1141 4-295 (296)
242 KOG0690 Serine/threonine prote 100.0 4.1E-38 8.8E-43 343.5 11.4 257 871-1143 164-428 (516)
243 cd05042 PTKc_Aatyk Catalytic d 100.0 2.9E-36 6.3E-41 314.2 24.8 246 881-1140 1-267 (269)
244 cd05041 PTKc_Fes_like Catalyti 100.0 3.6E-36 7.8E-41 309.2 25.1 245 881-1141 1-250 (251)
245 cd06606 STKc_MAPKKK Catalytic 100.0 5.5E-36 1.2E-40 303.3 26.1 253 876-1141 1-259 (260)
246 cd06626 STKc_MEKK4 Catalytic d 100.0 4E-36 8.7E-41 309.5 25.3 253 876-1141 1-263 (264)
247 cd05578 STKc_Yank1 Catalytic d 100.0 6E-37 1.3E-41 316.8 19.2 250 876-1140 1-256 (258)
248 cd06605 PKc_MAPKK Catalytic do 100.0 8.3E-37 1.8E-41 315.5 20.2 250 876-1142 2-260 (265)
249 cd05100 PTKc_FGFR3 Catalytic d 100.0 3.8E-36 8.2E-41 326.4 26.2 262 870-1147 7-297 (334)
250 cd06610 STKc_OSR1_SPAK Catalyt 100.0 2.6E-36 5.7E-41 310.7 23.8 252 875-1141 1-266 (267)
251 cd06624 STKc_ASK Catalytic dom 100.0 4.1E-36 8.8E-41 313.0 25.3 253 876-1141 9-267 (268)
252 cd05122 PKc_STE Catalytic doma 100.0 4.5E-36 9.8E-41 302.7 24.7 248 876-1140 1-252 (253)
253 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 8.2E-37 1.8E-41 322.0 19.9 257 873-1147 3-274 (284)
254 cd06654 STKc_PAK1 Catalytic do 100.0 5.1E-36 1.1E-40 320.2 26.0 252 875-1144 20-275 (296)
255 cd08218 STKc_Nek1 Catalytic do 100.0 4.6E-36 1E-40 309.2 24.6 251 876-1141 1-255 (256)
256 cd07843 STKc_CDC2L1 Catalytic 100.0 1.5E-36 3.2E-41 320.8 21.3 255 875-1141 5-292 (293)
257 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 4.6E-36 1E-40 313.4 24.6 247 881-1141 1-268 (269)
258 cd05110 PTKc_HER4 Catalytic do 100.0 4.4E-36 9.6E-41 321.1 25.0 260 871-1147 3-272 (303)
259 cd06640 STKc_MST4 Catalytic do 100.0 3.8E-36 8.2E-41 315.9 23.9 255 875-1147 4-261 (277)
260 cd05609 STKc_MAST Catalytic do 100.0 5.5E-36 1.2E-40 320.1 25.5 254 875-1142 1-276 (305)
261 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 3.4E-36 7.3E-41 309.3 22.7 242 881-1140 1-258 (259)
262 cd06623 PKc_MAPKK_plant_like C 100.0 1.1E-35 2.3E-40 305.7 26.1 251 875-1142 1-259 (264)
263 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.3E-36 2.9E-41 316.2 19.6 242 882-1140 2-257 (258)
264 KOG0667 Dual-specificity tyros 100.0 9.7E-37 2.1E-41 355.4 20.6 255 876-1148 187-511 (586)
265 KOG0594 Protein kinase PCTAIRE 100.0 5.5E-37 1.2E-41 338.5 17.5 258 875-1144 11-307 (323)
266 KOG1187 Serine/threonine prote 100.0 1.3E-36 2.9E-41 342.0 20.9 255 875-1144 75-353 (361)
267 cd07841 STKc_CDK7 Catalytic do 100.0 5.1E-36 1.1E-40 316.8 23.9 258 876-1144 1-287 (298)
268 cd06655 STKc_PAK2 Catalytic do 100.0 1.5E-35 3.3E-40 317.2 27.5 252 875-1144 19-274 (296)
269 cd07844 STKc_PCTAIRE_like Cata 100.0 6.9E-36 1.5E-40 314.8 24.3 253 874-1141 4-290 (291)
270 cd06607 STKc_TAO Catalytic dom 100.0 9E-36 1.9E-40 318.7 25.4 255 875-1144 15-272 (307)
271 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 5.8E-36 1.3E-40 316.5 23.4 242 882-1140 2-273 (274)
272 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.1E-36 1.5E-40 313.3 23.8 243 881-1140 1-261 (262)
273 cd07842 STKc_CDK8_like Catalyt 100.0 4.2E-36 9.1E-41 318.6 22.3 259 876-1141 1-315 (316)
274 cd05044 PTKc_c-ros Catalytic d 100.0 4.8E-36 1E-40 311.2 22.2 248 882-1141 2-268 (269)
275 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.8E-35 3.9E-40 313.0 26.8 253 875-1142 1-269 (287)
276 cd06642 STKc_STK25-YSK1 Cataly 100.0 3.6E-36 7.7E-41 315.5 20.9 251 876-1144 5-258 (277)
277 cd06656 STKc_PAK3 Catalytic do 100.0 8.1E-36 1.8E-40 318.8 23.8 251 875-1143 19-273 (297)
278 cd06917 STKc_NAK1_like Catalyt 100.0 7.9E-36 1.7E-40 311.5 23.2 251 876-1143 2-259 (277)
279 cd08215 STKc_Nek Catalytic dom 100.0 1.2E-35 2.6E-40 302.0 23.9 251 876-1141 1-257 (258)
280 cd07850 STKc_JNK Catalytic dom 100.0 9.5E-36 2.1E-40 326.1 24.8 254 874-1143 15-315 (353)
281 cd07860 STKc_CDK2_3 Catalytic 100.0 8.2E-36 1.8E-40 312.5 22.8 252 876-1141 1-283 (284)
282 cd07846 STKc_CDKL2_3 Catalytic 100.0 4.2E-36 9E-41 314.3 20.4 253 875-1141 1-285 (286)
283 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.2E-35 4.8E-40 311.6 25.9 252 875-1141 5-290 (291)
284 KOG0596 Dual specificity; seri 100.0 1.2E-36 2.5E-41 348.6 17.1 259 869-1141 355-629 (677)
285 cd05577 STKc_GRK Catalytic dom 100.0 1.2E-35 2.5E-40 312.3 23.4 249 883-1144 1-259 (277)
286 cd07836 STKc_Pho85 Catalytic d 100.0 1.5E-35 3.2E-40 309.9 23.8 251 876-1141 1-283 (284)
287 KOG0586 Serine/threonine prote 100.0 1.2E-36 2.6E-41 352.4 17.2 256 874-1145 55-312 (596)
288 cd06635 STKc_TAO1 Catalytic do 100.0 2.4E-35 5.2E-40 317.9 26.0 256 875-1145 25-283 (317)
289 cd08530 STKc_CNK2-like Catalyt 100.0 1.5E-35 3.2E-40 303.3 23.1 249 876-1140 1-254 (256)
290 cd07833 STKc_CDKL Catalytic do 100.0 1.2E-35 2.5E-40 310.6 22.8 252 876-1141 2-287 (288)
291 cd06641 STKc_MST3 Catalytic do 100.0 3.3E-35 7.2E-40 308.8 26.3 252 876-1145 5-259 (277)
292 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.4E-35 5.3E-40 309.0 24.7 246 882-1141 2-267 (268)
293 PLN00009 cyclin-dependent kina 100.0 2.9E-35 6.2E-40 311.2 25.3 256 875-1143 2-288 (294)
294 cd07837 STKc_CdkB_plant Cataly 100.0 2.3E-35 5E-40 310.7 24.4 256 875-1141 1-293 (295)
295 cd06616 PKc_MKK4 Catalytic dom 100.0 8.1E-36 1.8E-40 313.8 20.9 256 875-1144 4-272 (288)
296 KOG0612 Rho-associated, coiled 100.0 1.5E-37 3.3E-42 375.1 8.8 263 872-1147 72-346 (1317)
297 cd07840 STKc_CDK9_like Catalyt 100.0 2.5E-35 5.3E-40 306.5 24.1 253 877-1141 1-286 (287)
298 cd07865 STKc_CDK9 Catalytic do 100.0 2.6E-35 5.6E-40 311.1 24.6 255 875-1141 12-309 (310)
299 cd05579 STKc_MAST_like Catalyt 100.0 1.1E-35 2.4E-40 304.2 21.0 246 883-1142 1-260 (265)
300 cd08225 STKc_Nek5 Catalytic do 100.0 2.1E-35 4.6E-40 303.0 23.1 252 876-1141 1-256 (257)
301 PHA03211 serine/threonine kina 100.0 3.4E-35 7.4E-40 339.5 27.6 247 873-1142 167-458 (461)
302 cd05074 PTKc_Tyro3 Catalytic d 100.0 3.2E-35 6.9E-40 305.7 24.6 254 877-1143 1-272 (273)
303 cd06618 PKc_MKK7 Catalytic dom 100.0 1.5E-35 3.2E-40 314.9 22.4 260 871-1144 11-278 (296)
304 KOG0696 Serine/threonine prote 100.0 9.2E-37 2E-41 339.7 13.2 244 872-1131 346-593 (683)
305 cd05633 STKc_GRK3 Catalytic do 100.0 2.8E-35 6E-40 312.1 23.4 248 882-1144 1-260 (279)
306 cd06627 STKc_Cdc7_like Catalyt 100.0 1E-34 2.2E-39 296.2 26.0 248 876-1139 1-251 (254)
307 cd05611 STKc_Rim15_like Cataly 100.0 5.2E-35 1.1E-39 302.7 24.0 245 881-1142 2-254 (260)
308 KOG1989 ARK protein kinase fam 100.0 1.3E-35 2.8E-40 354.0 22.2 258 872-1145 34-313 (738)
309 cd07835 STKc_CDK1_like Catalyt 100.0 3.9E-35 8.5E-40 307.2 23.1 251 877-1141 1-282 (283)
310 KOG0579 Ste20-like serine/thre 100.0 6.1E-37 1.3E-41 352.0 10.1 255 875-1143 32-293 (1187)
311 cd07866 STKc_BUR1 Catalytic do 100.0 3.8E-35 8.2E-40 310.0 22.8 256 874-1141 7-310 (311)
312 cd07864 STKc_CDK12 Catalytic d 100.0 4.8E-35 1E-39 309.3 23.4 256 874-1141 6-301 (302)
313 cd06614 STKc_PAK Catalytic dom 100.0 5.4E-35 1.2E-39 307.9 23.6 253 875-1144 19-275 (286)
314 cd05581 STKc_PDK1 Catalytic do 100.0 2.9E-35 6.3E-40 305.0 21.1 251 875-1141 1-279 (280)
315 cd05613 STKc_MSK1_N N-terminal 100.0 4.3E-35 9.2E-40 309.3 22.7 256 876-1144 1-273 (290)
316 KOG1095 Protein tyrosine kinas 100.0 2.5E-35 5.4E-40 360.4 23.3 266 869-1150 686-968 (1025)
317 cd08226 PK_STRAD_beta Pseudoki 100.0 5.2E-35 1.1E-39 316.7 23.1 256 881-1148 4-317 (328)
318 cd06658 STKc_PAK5 Catalytic do 100.0 3.5E-35 7.5E-40 313.8 21.3 250 877-1145 24-278 (292)
319 cd05118 STKc_CMGC Catalytic do 100.0 3.9E-35 8.4E-40 305.2 20.9 251 877-1141 1-282 (283)
320 PRK13184 pknD serine/threonine 100.0 1E-34 2.2E-39 355.8 27.4 258 875-1145 2-292 (932)
321 cd05606 STKc_beta_ARK Catalyti 100.0 9.3E-35 2E-39 307.3 23.4 251 882-1145 1-261 (278)
322 cd07849 STKc_ERK1_2_like Catal 100.0 6.5E-35 1.4E-39 317.0 22.7 254 874-1142 4-295 (336)
323 cd06659 STKc_PAK6 Catalytic do 100.0 5.1E-35 1.1E-39 313.2 21.5 252 876-1145 22-277 (297)
324 cd06633 STKc_TAO3 Catalytic do 100.0 1.9E-34 4.1E-39 311.0 25.9 251 877-1142 23-276 (313)
325 cd08216 PK_STRAD Pseudokinase 100.0 4.1E-35 9E-40 312.7 20.1 255 878-1144 5-300 (314)
326 KOG0577 Serine/threonine prote 100.0 1.7E-36 3.7E-41 347.4 10.1 252 877-1143 28-282 (948)
327 cd07858 STKc_TEY_MAPK_plant Ca 100.0 6.4E-35 1.4E-39 317.7 21.7 257 875-1144 5-296 (337)
328 cd06634 STKc_TAO2 Catalytic do 100.0 9.1E-35 2E-39 312.2 22.3 255 875-1144 15-272 (308)
329 cd06648 STKc_PAK_II Catalytic 100.0 1.8E-34 3.9E-39 306.2 24.2 248 876-1142 20-272 (285)
330 cd06647 STKc_PAK_I Catalytic d 100.0 1.3E-34 2.8E-39 309.0 23.2 251 875-1143 19-273 (293)
331 cd07838 STKc_CDK4_6_like Catal 100.0 1.3E-34 2.9E-39 301.8 22.6 252 877-1141 1-286 (287)
332 cd07834 STKc_MAPK Catalytic do 100.0 1.2E-34 2.5E-39 311.9 22.2 257 876-1145 1-295 (330)
333 cd08222 STKc_Nek11 Catalytic d 100.0 1.2E-34 2.6E-39 300.0 21.2 253 876-1141 1-259 (260)
334 PHA02882 putative serine/threo 100.0 1.8E-34 4E-39 308.5 23.2 256 871-1140 8-293 (294)
335 cd07855 STKc_ERK5 Catalytic do 100.0 8.7E-35 1.9E-39 315.8 20.9 257 875-1144 5-299 (334)
336 PTZ00024 cyclin-dependent prot 100.0 2.3E-34 5.1E-39 311.4 23.4 260 875-1143 8-317 (335)
337 cd05583 STKc_MSK_N N-terminal 100.0 2.6E-34 5.6E-39 303.0 23.1 253 876-1141 1-268 (288)
338 cd07830 STKc_MAK_like Catalyti 100.0 1.3E-34 2.9E-39 302.5 20.7 250 877-1141 1-282 (283)
339 KOG4279 Serine/threonine prote 100.0 7.5E-36 1.6E-40 345.8 12.1 251 881-1144 581-837 (1226)
340 cd07852 STKc_MAPK15 Catalytic 100.0 1.4E-34 3E-39 313.9 21.2 257 874-1144 6-300 (337)
341 KOG0986 G protein-coupled rece 100.0 1.8E-35 3.9E-40 333.1 14.2 256 870-1140 180-447 (591)
342 cd05123 STKc_AGC Catalytic dom 100.0 2.4E-34 5.1E-39 294.2 21.2 243 883-1141 1-249 (250)
343 KOG0574 STE20-like serine/thre 100.0 4.8E-37 1E-41 332.5 1.1 247 876-1140 34-284 (502)
344 cd07880 STKc_p38gamma_MAPK12 C 100.0 6.6E-34 1.4E-38 311.5 25.4 255 874-1144 14-303 (343)
345 PHA03390 pk1 serine/threonine- 100.0 4.1E-34 8.8E-39 301.4 22.2 242 876-1142 15-265 (267)
346 PHA03210 serine/threonine kina 100.0 1.9E-34 4.1E-39 334.8 20.5 260 875-1143 148-458 (501)
347 KOG4645 MAPKKK (MAP kinase kin 100.0 2.8E-36 6E-41 367.7 5.4 251 876-1139 1236-1494(1509)
348 KOG0614 cGMP-dependent protein 100.0 6E-36 1.3E-40 339.5 7.5 262 872-1147 417-685 (732)
349 cd06657 STKc_PAK4 Catalytic do 100.0 4.3E-34 9.2E-39 306.0 20.9 250 879-1147 24-278 (292)
350 cd07854 STKc_MAPK4_6 Catalytic 100.0 7.5E-34 1.6E-38 310.4 22.9 254 875-1143 5-304 (342)
351 cd07829 STKc_CDK_like Catalyti 100.0 4.3E-34 9.4E-39 297.2 19.8 251 877-1141 1-281 (282)
352 cd07857 STKc_MPK1 Catalytic do 100.0 1.9E-33 4.1E-38 305.1 25.0 254 876-1142 1-295 (332)
353 KOG0584 Serine/threonine prote 100.0 6.2E-35 1.3E-39 338.8 14.1 256 875-1143 39-300 (632)
354 KOG0983 Mitogen-activated prot 100.0 5.6E-34 1.2E-38 306.7 20.1 254 874-1142 91-352 (391)
355 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.3E-33 4.9E-38 307.5 25.4 255 874-1144 16-305 (345)
356 cd07879 STKc_p38delta_MAPK13 C 100.0 1.1E-33 2.5E-38 309.0 22.5 251 875-1142 15-300 (342)
357 cd07851 STKc_p38 Catalytic dom 100.0 7.7E-34 1.7E-38 310.5 21.1 255 874-1144 14-303 (343)
358 KOG0695 Serine/threonine prote 100.0 4.6E-34 9.9E-39 312.4 19.1 256 869-1140 244-517 (593)
359 cd05610 STKc_MASTL Catalytic d 100.0 2.7E-33 5.8E-38 336.2 27.2 147 875-1033 4-152 (669)
360 cd06410 PB1_UP2 Uncharacterize 100.0 9.2E-35 2E-39 273.8 10.2 95 188-284 1-97 (97)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 6.4E-33 1.4E-37 302.5 25.1 253 873-1142 8-291 (328)
362 KOG2345 Serine/threonine prote 100.0 3.8E-34 8.2E-39 305.1 14.9 262 870-1143 16-300 (302)
363 KOG0604 MAP kinase-activated p 100.0 1.2E-34 2.5E-39 314.8 10.9 254 875-1144 61-327 (400)
364 KOG4257 Focal adhesion tyrosin 100.0 7E-34 1.5E-38 327.6 17.6 254 875-1145 389-651 (974)
365 KOG4236 Serine/threonine prote 100.0 1.3E-34 2.9E-39 328.8 11.3 249 881-1142 570-822 (888)
366 KOG1035 eIF-2alpha kinase GCN2 100.0 4.2E-34 9E-39 347.7 15.6 251 875-1139 479-871 (1351)
367 KOG4278 Protein tyrosine kinas 100.0 2.4E-33 5.1E-38 322.2 18.8 261 867-1145 259-525 (1157)
368 cd05576 STKc_RPK118_like Catal 100.0 6.1E-33 1.3E-37 287.1 18.4 226 886-1141 4-236 (237)
369 KOG0196 Tyrosine kinase, EPH ( 100.0 1.2E-33 2.6E-38 332.3 14.6 260 871-1146 625-894 (996)
370 KOG4250 TANK binding protein k 100.0 1.3E-33 2.8E-38 331.0 14.2 258 875-1140 13-307 (732)
371 KOG0199 ACK and related non-re 100.0 2.9E-33 6.3E-38 325.6 14.8 250 874-1140 109-369 (1039)
372 KOG0666 Cyclin C-dependent kin 100.0 1.6E-33 3.5E-38 306.9 11.1 265 875-1148 24-346 (438)
373 KOG1094 Discoidin domain recep 100.0 2.2E-32 4.7E-37 314.4 20.1 261 869-1144 532-805 (807)
374 KOG0607 MAP kinase-interacting 100.0 3.7E-33 7.9E-38 304.8 11.7 254 881-1146 84-368 (463)
375 KOG0603 Ribosomal protein S6 k 100.0 7.7E-33 1.7E-37 322.2 14.0 244 874-1144 321-568 (612)
376 smart00220 S_TKc Serine/Threon 100.0 1.5E-31 3.3E-36 267.0 21.2 238 887-1140 1-242 (244)
377 KOG0587 Traf2- and Nck-interac 100.0 4.5E-32 9.7E-37 322.7 18.7 255 874-1141 18-284 (953)
378 KOG1006 Mitogen-activated prot 100.0 3E-33 6.5E-38 300.3 4.4 261 868-1142 57-330 (361)
379 PLN00113 leucine-rich repeat r 100.0 1.6E-31 3.5E-36 329.1 19.7 241 877-1145 692-953 (968)
380 KOG0200 Fibroblast/platelet-de 100.0 5.5E-31 1.2E-35 313.7 23.2 260 869-1144 290-580 (609)
381 KOG0608 Warts/lats-like serine 100.0 6.6E-32 1.4E-36 311.5 14.7 264 872-1150 626-939 (1034)
382 KOG1151 Tousled-like protein k 100.0 2.9E-32 6.4E-37 305.5 8.7 270 874-1147 462-749 (775)
383 KOG0671 LAMMER dual specificit 100.0 1.2E-31 2.6E-36 298.4 10.2 261 867-1144 81-411 (415)
384 KOG0662 Cyclin-dependent kinas 100.0 2.9E-31 6.4E-36 273.0 11.3 253 876-1142 3-286 (292)
385 PLN03225 Serine/threonine-prot 100.0 2.8E-30 6.1E-35 305.5 20.6 256 872-1144 129-455 (566)
386 PLN03224 probable serine/threo 100.0 1.8E-29 3.8E-34 295.5 23.1 267 873-1143 143-504 (507)
387 KOG0669 Cyclin T-dependent kin 100.0 6.6E-32 1.4E-36 288.3 2.3 263 873-1147 15-323 (376)
388 KOG1290 Serine/threonine prote 100.0 7.3E-29 1.6E-33 282.0 23.0 273 859-1145 58-556 (590)
389 KOG1025 Epidermal growth facto 100.0 6.8E-30 1.5E-34 301.4 14.4 258 872-1146 693-960 (1177)
390 KOG0668 Casein kinase II, alph 100.0 5.4E-30 1.2E-34 271.0 11.8 257 873-1148 36-331 (338)
391 cd00180 PKc Catalytic domain o 100.0 2.4E-28 5.1E-33 236.1 21.4 211 883-1140 1-215 (215)
392 KOG0670 U4/U6-associated splic 100.0 3.2E-30 6.9E-35 293.8 7.7 257 868-1142 425-749 (752)
393 KOG2052 Activin A type IB rece 100.0 9.6E-29 2.1E-33 279.0 19.0 255 874-1145 210-505 (513)
394 KOG3653 Transforming growth fa 100.0 8.6E-29 1.9E-33 280.9 15.1 260 873-1149 208-509 (534)
395 KOG1027 Serine/threonine prote 100.0 2.7E-29 5.8E-34 298.2 8.0 241 881-1139 515-767 (903)
396 KOG0984 Mitogen-activated prot 100.0 1.5E-28 3.2E-33 257.5 11.9 215 873-1101 44-268 (282)
397 smart00221 STYKc Protein kinas 100.0 4E-27 8.7E-32 235.0 21.6 205 877-1095 1-210 (225)
398 KOG0576 Mitogen-activated prot 99.9 2.1E-28 4.5E-33 285.2 7.1 251 874-1139 14-271 (829)
399 KOG0664 Nemo-like MAPK-related 99.9 1.3E-28 2.7E-33 265.2 2.5 254 875-1141 53-345 (449)
400 KOG1152 Signal transduction se 99.9 8E-28 1.7E-32 277.0 8.2 207 873-1088 559-771 (772)
401 KOG0665 Jun-N-terminal kinase 99.9 2.9E-27 6.4E-32 259.2 11.5 252 874-1142 16-313 (369)
402 COG0515 SPS1 Serine/threonine 99.9 2.5E-24 5.4E-29 214.7 26.3 251 877-1139 2-275 (384)
403 KOG1024 Receptor-like protein 99.9 3.3E-25 7.1E-30 247.4 20.1 261 874-1149 283-561 (563)
404 PLN00181 protein SPA1-RELATED; 99.9 2E-26 4.2E-31 281.0 10.1 205 934-1144 28-270 (793)
405 KOG1164 Casein kinase (serine/ 99.9 2.7E-24 5.8E-29 236.7 24.5 260 876-1147 19-301 (322)
406 smart00750 KIND kinase non-cat 99.9 2.4E-25 5.3E-30 219.4 14.1 164 965-1146 1-172 (176)
407 KOG1345 Serine/threonine kinas 99.9 5.4E-25 1.2E-29 237.6 9.3 251 875-1142 24-290 (378)
408 KOG1167 Serine/threonine prote 99.9 1.3E-24 2.8E-29 244.7 10.4 248 875-1142 36-384 (418)
409 KOG1165 Casein kinase (serine/ 99.9 8.5E-23 1.8E-27 225.2 18.5 262 872-1148 25-304 (449)
410 KOG1163 Casein kinase (serine/ 99.9 6.2E-23 1.3E-27 219.1 16.3 259 871-1145 11-286 (341)
411 KOG0590 Checkpoint kinase and 99.9 1.7E-22 3.6E-27 241.3 7.8 255 879-1144 322-590 (601)
412 PRK09188 serine/threonine prot 99.9 3.3E-21 7.1E-26 218.4 16.1 164 874-1058 17-194 (365)
413 KOG0603 Ribosomal protein S6 k 99.8 2.3E-22 5E-27 235.3 3.3 224 883-1132 2-231 (612)
414 KOG1240 Protein kinase contain 99.8 4.8E-21 1E-25 232.8 4.6 250 876-1139 24-291 (1431)
415 KOG4158 BRPK/PTEN-induced prot 99.8 8.1E-20 1.8E-24 205.1 12.8 263 872-1140 154-511 (598)
416 KOG0195 Integrin-linked kinase 99.8 7.9E-20 1.7E-24 197.7 8.1 251 875-1143 190-446 (448)
417 cd05147 RIO1_euk RIO kinase fa 99.8 4.2E-19 9.2E-24 183.5 13.0 146 880-1035 2-167 (190)
418 KOG0606 Microtubule-associated 99.8 8.6E-20 1.9E-24 222.1 8.4 203 874-1130 82-303 (1205)
419 PRK10359 lipopolysaccharide co 99.8 3.7E-19 8.1E-24 191.0 11.7 176 873-1080 29-216 (232)
420 PRK12274 serine/threonine prot 99.8 2.1E-18 4.5E-23 183.5 14.7 190 878-1089 5-210 (218)
421 PF14531 Kinase-like: Kinase-l 99.8 2.3E-18 5E-23 189.9 14.9 237 876-1130 13-288 (288)
422 cd05145 RIO1_like RIO kinase f 99.8 3.2E-18 6.8E-23 175.4 14.4 146 880-1036 2-168 (190)
423 KOG1166 Mitotic checkpoint ser 99.8 2.3E-18 4.9E-23 212.3 15.4 248 872-1147 695-957 (974)
424 PRK10345 hypothetical protein; 99.7 8.4E-18 1.8E-22 177.7 13.2 141 879-1032 6-156 (210)
425 PRK14879 serine/threonine prot 99.7 3.8E-17 8.2E-22 166.8 13.8 142 881-1034 2-143 (211)
426 TIGR03724 arch_bud32 Kae1-asso 99.7 1E-16 2.2E-21 162.6 13.5 136 882-1034 1-138 (199)
427 PRK09605 bifunctional UGMP fam 99.7 2.3E-16 5.1E-21 185.7 14.4 142 877-1034 335-476 (535)
428 smart00090 RIO RIO-like kinase 99.7 3.6E-16 7.9E-21 167.3 14.0 148 876-1035 29-198 (237)
429 KOG1023 Natriuretic peptide re 99.7 3.1E-16 6.6E-21 183.1 11.8 208 932-1145 1-226 (484)
430 cd05144 RIO2_C RIO kinase fami 99.6 1.7E-15 3.7E-20 155.3 13.3 142 876-1034 16-174 (198)
431 KOG1033 eIF-2alpha kinase PEK/ 99.6 1.1E-16 2.4E-21 185.3 4.1 171 953-1136 329-509 (516)
432 cd05120 APH_ChoK_like Aminogly 99.6 1.4E-14 3.1E-19 135.3 13.0 132 879-1034 2-138 (155)
433 PRK01723 3-deoxy-D-manno-octul 99.6 2.7E-14 5.7E-19 153.1 13.5 144 881-1034 37-191 (239)
434 cd05119 RIO RIO kinase family, 99.6 2.5E-14 5.5E-19 143.6 12.1 141 880-1034 2-163 (187)
435 KOG0590 Checkpoint kinase and 99.5 4.7E-16 1E-20 186.4 -2.8 257 875-1144 20-291 (601)
436 KOG0601 Cyclin-dependent kinas 99.4 5.7E-13 1.2E-17 156.6 8.5 250 873-1139 112-379 (524)
437 TIGR01982 UbiB 2-polyprenylphe 99.2 4.1E-11 8.9E-16 139.3 12.3 145 881-1036 123-308 (437)
438 cd05151 ChoK Choline Kinase (C 99.2 5.2E-11 1.1E-15 117.2 9.8 127 880-1033 3-135 (170)
439 PRK04750 ubiB putative ubiquin 99.2 5.5E-11 1.2E-15 141.5 9.0 153 875-1036 120-315 (537)
440 KOG0606 Microtubule-associated 99.2 1.1E-11 2.3E-16 152.6 3.0 246 875-1134 804-1084(1205)
441 cd05146 RIO3_euk RIO kinase fa 99.1 7.1E-10 1.5E-14 117.3 13.8 142 881-1035 3-174 (197)
442 COG3642 Mn2+-dependent serine/ 99.0 1.7E-09 3.6E-14 114.0 13.0 136 882-1034 3-140 (204)
443 KOG0601 Cyclin-dependent kinas 99.0 1.1E-10 2.4E-15 137.7 4.2 252 873-1145 263-520 (524)
444 KOG1266 Protein kinase [Signal 99.0 3.8E-10 8.1E-15 126.3 5.8 200 931-1141 120-333 (458)
445 cd05154 ACAD10_11_like Acyl-Co 99.0 6.8E-09 1.5E-13 105.7 13.7 144 880-1034 3-206 (223)
446 KOG3087 Serine/threonine prote 99.0 4.4E-09 9.5E-14 111.0 12.1 151 879-1034 11-165 (229)
447 KOG1243 Protein kinase [Genera 98.9 2.4E-08 5.2E-13 119.8 16.0 163 897-1083 36-200 (690)
448 COG4248 Uncharacterized protei 98.9 8.9E-08 1.9E-12 110.4 18.4 259 879-1153 15-310 (637)
449 smart00666 PB1 PB1 domain. Pho 98.8 2.4E-08 5.2E-13 90.3 9.4 75 202-284 4-81 (81)
450 PF01163 RIO1: RIO1 family; I 98.8 1E-07 2.2E-12 100.3 13.6 133 890-1036 1-157 (188)
451 PRK15123 lipopolysaccharide co 98.7 3E-07 6.4E-12 101.5 16.2 147 887-1033 34-193 (268)
452 KOG3741 Poly(A) ribonuclease s 98.7 4.8E-07 1E-11 106.6 18.5 214 887-1140 288-522 (655)
453 PF06293 Kdo: Lipopolysacchari 98.5 4.5E-07 9.7E-12 95.4 11.2 110 923-1034 56-170 (206)
454 PF00564 PB1: PB1 domain; Int 98.3 2.5E-06 5.4E-11 77.4 8.1 74 205-285 7-83 (84)
455 KOG2137 Protein kinase [Signal 98.2 4.1E-07 9E-12 109.8 2.4 146 988-1139 106-265 (700)
456 COG0478 RIO-like serine/threon 98.2 7.3E-06 1.6E-10 91.2 11.5 141 878-1034 94-251 (304)
457 PRK09902 hypothetical protein; 98.2 2.2E-05 4.8E-10 84.8 13.4 146 883-1033 26-178 (216)
458 cd05992 PB1 The PB1 domain is 98.2 1.1E-05 2.3E-10 72.8 9.2 73 204-284 5-81 (81)
459 KOG0576 Mitogen-activated prot 98.0 9E-07 1.9E-11 106.3 -1.5 234 877-1138 244-483 (829)
460 PF13095 FTA2: Kinetochore Sim 98.0 7.5E-05 1.6E-09 80.3 13.1 135 875-1032 37-206 (207)
461 PF06176 WaaY: Lipopolysacchar 98.0 0.00014 3.1E-09 79.3 14.8 144 872-1033 28-182 (229)
462 COG0661 AarF Predicted unusual 97.9 3.8E-05 8.3E-10 92.1 10.1 146 881-1036 131-316 (517)
463 PF01636 APH: Phosphotransfera 97.9 0.00029 6.2E-09 71.9 15.1 80 880-969 2-84 (239)
464 COG1718 RIO1 Serine/threonine 97.8 0.00025 5.5E-09 78.5 14.2 145 879-1036 52-217 (268)
465 TIGR02172 Fb_sc_TIGR02172 Fibr 97.8 0.00019 4.2E-09 77.2 12.1 72 881-966 7-80 (226)
466 cd06407 PB1_NLP A PB1 domain i 97.8 0.00017 3.7E-09 67.3 9.7 71 207-284 7-81 (82)
467 COG2112 Predicted Ser/Thr prot 97.7 0.00013 2.9E-09 77.4 9.3 131 877-1036 24-157 (201)
468 KOG1235 Predicted unusual prot 97.7 0.00017 3.8E-09 86.8 11.0 150 881-1036 167-356 (538)
469 cd05150 APH Aminoglycoside 3'- 97.7 0.00034 7.4E-09 74.3 12.0 75 882-969 5-81 (244)
470 KOG1826 Ras GTPase activating 97.6 5E-06 1.1E-10 106.6 -3.4 239 890-1138 1241-1491(2724)
471 PF10707 YrbL-PhoP_reg: PhoP r 97.5 0.00096 2.1E-08 71.3 12.9 144 880-1032 6-170 (199)
472 PLN02876 acyl-CoA dehydrogenas 97.5 0.0011 2.4E-08 83.6 15.5 82 879-967 42-131 (822)
473 KOG1035 eIF-2alpha kinase GCN2 97.5 0.00025 5.4E-09 90.4 9.5 204 922-1141 226-436 (1351)
474 cd06408 PB1_NoxR The PB1 domai 97.4 0.00054 1.2E-08 64.8 8.3 72 208-283 10-85 (86)
475 cd05155 APH_ChoK_like_1 Unchar 97.3 0.0018 3.9E-08 69.0 11.7 76 880-968 2-82 (235)
476 PF12260 PIP49_C: Protein-kina 97.2 0.0016 3.4E-08 68.8 9.2 97 927-1034 8-111 (188)
477 cd05157 ETNK_euk Ethanolamine 97.1 0.0041 8.9E-08 65.6 11.6 73 880-967 3-79 (235)
478 cd06405 PB1_Mekk2_3 The PB1 do 97.1 0.0021 4.5E-08 59.4 7.8 70 208-284 8-77 (79)
479 TIGR02721 ycfN_thiK thiamine k 96.7 0.0073 1.6E-07 65.2 9.7 133 883-1034 4-175 (256)
480 cd05153 HomoserineK_II Homoser 96.6 0.021 4.5E-07 62.5 12.1 141 878-1033 17-204 (296)
481 cd05156 ChoK_euk Choline Kinas 96.5 0.013 2.8E-07 64.6 10.1 74 880-968 3-85 (302)
482 PRK09550 mtnK methylthioribose 96.5 0.028 6.1E-07 66.2 13.0 83 879-966 30-117 (401)
483 TIGR00938 thrB_alt homoserine 96.5 0.02 4.4E-07 63.6 11.3 143 877-1033 24-216 (307)
484 PRK05231 homoserine kinase; Pr 96.4 0.032 7E-07 61.9 12.7 78 879-967 26-109 (319)
485 cd06404 PB1_aPKC PB1 domain is 96.4 0.02 4.3E-07 54.1 9.1 72 207-285 7-82 (83)
486 cd06401 PB1_TFG The PB1 domain 96.3 0.016 3.4E-07 54.5 7.8 53 208-263 8-67 (81)
487 cd06398 PB1_Joka2 The PB1 doma 96.1 0.033 7.2E-07 53.3 9.1 71 208-284 8-87 (91)
488 KOG1093 Predicted protein kina 95.9 0.014 3.1E-07 70.3 7.0 158 923-1139 27-194 (725)
489 cd06396 PB1_NBR1 The PB1 domai 95.6 0.072 1.6E-06 50.2 8.9 69 208-284 8-79 (81)
490 TIGR02906 spore_CotS spore coa 95.5 0.1 2.2E-06 57.3 11.4 29 1000-1033 187-215 (313)
491 KOG2270 Serine/threonine prote 95.5 0.11 2.4E-06 61.2 11.6 147 878-1035 147-314 (520)
492 KOG2268 Serine/threonine prote 95.3 0.019 4.1E-07 66.4 4.8 140 877-1033 94-250 (465)
493 PRK10593 hypothetical protein; 95.1 0.17 3.8E-06 56.8 11.7 109 876-1000 15-127 (297)
494 cd05152 MPH2' Macrolide 2'-Pho 95.0 0.22 4.8E-06 55.5 12.0 31 1001-1034 186-216 (276)
495 PLN02756 S-methyl-5-thioribose 94.8 0.43 9.3E-06 56.9 14.3 81 879-964 36-119 (418)
496 PLN02236 choline kinase 94.8 0.36 7.9E-06 55.4 13.3 140 877-1034 38-231 (344)
497 cd06397 PB1_UP1 Uncharacterize 94.7 0.087 1.9E-06 49.6 6.4 56 208-266 8-66 (82)
498 PLN02421 phosphotransferase, a 94.2 0.5 1.1E-05 53.9 12.5 30 1002-1034 184-213 (330)
499 cd06402 PB1_p62 The PB1 domain 93.5 0.26 5.7E-06 47.1 7.3 65 210-284 15-85 (87)
500 TIGR01767 MTRK 5-methylthiorib 93.2 0.29 6.4E-06 57.4 8.6 79 882-965 2-85 (370)
No 1
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-48 Score=432.93 Aligned_cols=269 Identities=25% Similarity=0.346 Sum_probs=231.6
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
..+.|.+.+.||+|+||.|.+|.. +|+.||||++.+........ ..+....+.+|+++|++|+|||||+++++|..
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~-~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~- 247 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSR-AIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV- 247 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccc-cccchhhhHHHHHHHHhcCCCCEEEEeeeeec-
Confidence 346788999999999999999977 58889999999876655433 12223446799999999999999999999988
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
....||||||++||+|.+.+..++ .+.+.....+++||+.||.|||++||+||||||+|||+..+. +.-.+||+|||
T Consensus 248 -~ds~YmVlE~v~GGeLfd~vv~nk-~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~-e~~llKItDFG 324 (475)
T KOG0615|consen 248 -PDSSYMVLEYVEGGELFDKVVANK-YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDA-EDCLLKITDFG 324 (475)
T ss_pred -CCceEEEEEEecCccHHHHHHhcc-ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCC-cceEEEecccc
Confidence 557899999999999999987654 477778888999999999999999999999999999998544 66899999999
Q ss_pred CcccccCCcccCCCCCCCcccCcccccCCCCCCCc-hhHHHHHHHHHHHHHcCCCCCCCCChhH-HHHHhhhcCCC--CC
Q 001103 1031 LSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSE-KVDVYSFGIAMWEIITGEEPYANMHCGA-IIGGILSNTLR--PQ 1106 (1157)
Q Consensus 1031 LAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~-KSDIWSLGVILYELLTGk~PF~g~~~ee-il~~Il~~~lr--pe 1106 (1157)
+|+...+...+.++||||.|.|||++.+.+..+.. ++|+|||||+||-+|+|.+||....... ..++|..+.+. +.
T Consensus 325 lAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~ 404 (475)
T KOG0615|consen 325 LAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPL 404 (475)
T ss_pred hhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccCh
Confidence 99998888888899999999999999876555554 8999999999999999999999876666 77778777554 34
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
.+.+++++.++||.+||..||++|||+.++|++.|..-..
T Consensus 405 ~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 405 QWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAP 444 (475)
T ss_pred hhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhccc
Confidence 5677999999999999999999999999999999987443
No 2
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-46 Score=416.95 Aligned_cols=258 Identities=32% Similarity=0.509 Sum_probs=226.5
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+...+++.++.||+|+.|+||+++++ +..+|+|++... ......+++.+|+++++.++||+||++|++|..
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~-------~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN-------IDPALQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc-------CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 44568888999999999999999996 667999999543 124567899999999999999999999999998
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
+.. .++|+||||++|+|..+++..+ .+++....+++.++++||.|||. ++||||||||+|||++ ..+.|||||
T Consensus 149 ~~~-~isI~mEYMDgGSLd~~~k~~g-~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvN----skGeVKicD 222 (364)
T KOG0581|consen 149 NGE-EISICMEYMDGGSLDDILKRVG-RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVN----SKGEVKICD 222 (364)
T ss_pred CCc-eEEeehhhcCCCCHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeec----cCCCEEecc
Confidence 432 6999999999999999998764 48999999999999999999995 8999999999999999 889999999
Q ss_pred cCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCC-----ChhHHHHHhhhcCC
Q 001103 1029 FGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANM-----HCGAIIGGILSNTL 1103 (1157)
Q Consensus 1029 FGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~-----~~eeil~~Il~~~l 1103 (1157)
||.++...+. ...+++||..|||||+++|. .|+.++||||||++|+||++|+.||... ...+++..|..+ .
T Consensus 223 FGVS~~lvnS-~a~tfvGT~~YMsPERi~g~--~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~-p 298 (364)
T KOG0581|consen 223 FGVSGILVNS-IANTFVGTSAYMSPERISGE--SYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE-P 298 (364)
T ss_pred ccccHHhhhh-hcccccccccccChhhhcCC--cCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC-C
Confidence 9999988777 55678999999999999976 6788999999999999999999999874 455677777654 4
Q ss_pred CCCCCCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1104 RPQIPER-CDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1104 rpeip~~-iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
++.+|.. ++++++.||..||++||.+|||++||++|.+.....
T Consensus 299 pP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 299 PPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred CCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhcc
Confidence 5667776 999999999999999999999999999998877543
No 3
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-45 Score=414.28 Aligned_cols=271 Identities=45% Similarity=0.798 Sum_probs=239.0
Q ss_pred cccccCCCeeEEEEecccCcEEEEEEEECCce-EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 869 LQIIKDSDLEELQELGSGTFGTVYRGKWRGTD-IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 869 i~~I~~sdYeILrkLGsGsFGtVYlAr~kGt~-VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
.+.+...++.+.+.||+|+||+||+|.|+|+. ||||++........ . .+.|.+|+.+|.+|+|||||+++|++
T Consensus 35 ~~~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~-----~-~~~f~~E~~il~~l~HpNIV~f~G~~ 108 (362)
T KOG0192|consen 35 EEEIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDE-----S-RKAFRREASLLSRLRHPNIVQFYGAC 108 (362)
T ss_pred ceecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChH-----H-HHHHHHHHHHHHhCCCCCeeeEEEEE
Confidence 34455566677778999999999999999999 99999987533221 1 67899999999999999999999999
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhcc-ccccccHHHHHHHHHHHHHHHHHHHHCC-ceeccCCccceeeccCCCCCC-eE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLAR-KDRILDRRKKLMLMMDAAFGMEYLHMKN-IVHFDLKCDNLLVNLRDPQRP-IC 1024 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr-~gr~L~e~qVlkIa~QLa~ALeYLHSkG-IIHRDLKPENILLd~dd~e~g-~V 1024 (1157)
..++. .++||||||++|+|.+++.+ ..+.+++..++.++.||++||+|||+++ ||||||||+|||++ ... ++
T Consensus 109 ~~~~~-~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~----~~~~~~ 183 (362)
T KOG0192|consen 109 TSPPG-SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVD----LKGKTL 183 (362)
T ss_pred cCCCC-ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEc----CCCCEE
Confidence 88532 68999999999999999987 3678999999999999999999999999 99999999999999 665 99
Q ss_pred EEEecCCcccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC
Q 001103 1025 KVGDFGLSRIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL 1103 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l 1103 (1157)
||+|||+++..... ...+...||+.|||||++.+....|+.|+||||||++||||+||+.||...........+.....
T Consensus 184 KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~ 263 (362)
T KOG0192|consen 184 KIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGL 263 (362)
T ss_pred EECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC
Confidence 99999999876654 34444789999999999985334689999999999999999999999999999888888888999
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHhhc
Q 001103 1104 RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQTK 1150 (1157)
Q Consensus 1104 rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLesk 1150 (1157)
++.++..+++.+..||..||..||.+||++.+++..|+.+.......
T Consensus 264 Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~~ 310 (362)
T KOG0192|consen 264 RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISSA 310 (362)
T ss_pred CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999998766543
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-45 Score=424.67 Aligned_cols=252 Identities=28% Similarity=0.434 Sum_probs=229.7
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|+..+.||+|+|+.||++++ .|..||+|++.+..+.... ..+++.+|++|-+.|+|||||++|++|++ .
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~-----~reKv~~EIeIHr~L~HpnIV~f~~~FED--s 90 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPK-----QREKVLNEIEIHRSLKHPNIVQFYHFFED--S 90 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcc-----hHHHHHHHHHHHHhcCCCcEEeeeeEeec--C
Confidence 5799999999999999999988 5888999999987655433 35788999999999999999999999999 6
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
.++|||+|+|..++|.++++ ..+.++|..+++++.||+.||.|||+++|||||||..|+|++ ++.+|||+|||||
T Consensus 91 ~nVYivLELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~----~~~~VKIgDFGLA 165 (592)
T KOG0575|consen 91 NNVYIVLELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLN----ENMNVKIGDFGLA 165 (592)
T ss_pred CceEEEEEecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeec----CcCcEEeccccee
Confidence 79999999999999999998 456799999999999999999999999999999999999999 8889999999999
Q ss_pred ccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
.....+ ....+.||||.|.|||++... ..+..+||||+||+||.||.|++||+.....+.+..|....+. +|..+
T Consensus 166 t~le~~~Erk~TlCGTPNYIAPEVl~k~--gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~--~P~~l 241 (592)
T KOG0575|consen 166 TQLEYDGERKKTLCGTPNYIAPEVLNKS--GHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYS--MPSHL 241 (592)
T ss_pred eeecCcccccceecCCCcccChhHhccC--CCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcc--ccccc
Confidence 976644 667779999999999999854 5689999999999999999999999999999999999877664 67789
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+.++++||.+||+.||.+|||+++++.+-.+
T Consensus 242 s~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff 272 (592)
T KOG0575|consen 242 SAEAKDLIRKLLRPNPSERPSLDEVLDHPFF 272 (592)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhcCHhh
Confidence 9999999999999999999999999998776
No 5
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-45 Score=408.81 Aligned_cols=257 Identities=27% Similarity=0.444 Sum_probs=225.2
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+..++|++++.||+|+||+||+++.+ ++-||+|++++.....++ ..+...+|..+|..++||+||+++..|++
T Consensus 22 ~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~-----e~~~~~~Er~IL~~v~hPFiv~l~ysFQt 96 (357)
T KOG0598|consen 22 VGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKK-----EVRHTKAERNILSKIKHPFIVKLIYSFQT 96 (357)
T ss_pred CChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhh-----hHHHHHHHHHHHHhCCCCcEeeeEEeccc
Confidence 44579999999999999999999874 667999999987655442 25678899999999999999999999998
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
.+.+|+|+||+.||.|...|.+.+. +++..+..++.+|+.||.|||++|||||||||+|||++ .+|+++|+||
T Consensus 97 --~~kLylVld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd----~~GHi~LtDF 169 (357)
T KOG0598|consen 97 --EEKLYLVLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD----EQGHIKLTDF 169 (357)
T ss_pred --CCeEEEEEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec----CCCcEEEecc
Confidence 6789999999999999999976654 88999999999999999999999999999999999999 8899999999
Q ss_pred CCcccccC-CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC
Q 001103 1030 GLSRIKCN-TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP 1108 (1157)
Q Consensus 1030 GLAkl~~~-~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip 1108 (1157)
|+|+.... ...+.++|||+.|||||++.+. .|+..+||||||+++|||++|.+||.+.+....+..|..... ...+
T Consensus 170 gL~k~~~~~~~~t~tfcGT~eYmAPEil~~~--gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~-~~~p 246 (357)
T KOG0598|consen 170 GLCKEDLKDGDATRTFCGTPEYMAPEILLGK--GYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKL-PLPP 246 (357)
T ss_pred ccchhcccCCCccccccCCccccChHHHhcC--CCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcC-CCCC
Confidence 99996443 4556678999999999999965 689999999999999999999999999998888888876653 3456
Q ss_pred CCCcHHHHHHHHHHhccCCCCCC----CHHHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARP----SFTEITNRLRVM 1143 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRP----SaeELLe~Lr~L 1143 (1157)
..++.+.++||+++|++||++|- ++++|.+|..+.
T Consensus 247 ~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~ 285 (357)
T KOG0598|consen 247 GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFK 285 (357)
T ss_pred ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCcccc
Confidence 66999999999999999999994 677777765443
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-44 Score=401.33 Aligned_cols=256 Identities=28% Similarity=0.488 Sum_probs=224.0
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++.++||.|+||+||+|++ ++..||||.+.+..+ .....+-+..|+++|+.|+|||||++++++..
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l------~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~-- 80 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL------NKKLVELLLSEIKILKELKHPNIVRLLDCIED-- 80 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc------CHHHHHHHHHHHHHHHhcCCcceeeEEEEEec--
Confidence 36899999999999999999998 477899999987633 23445678899999999999999999999988
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCC--CeEEEEec
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQR--PICKVGDF 1029 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~--g~VKLiDF 1029 (1157)
.+.+|||||||.||+|.+++.+.+ .+++..++.++.||+.||++||+++||||||||+||||+...... ..+||+||
T Consensus 81 ~~~i~lVMEyC~gGDLs~yi~~~~-~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADF 159 (429)
T KOG0595|consen 81 DDFIYLVMEYCNGGDLSDYIRRRG-RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADF 159 (429)
T ss_pred CCeEEEEEEeCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEeccc
Confidence 669999999999999999998766 499999999999999999999999999999999999998543233 78999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc-CCCCCCC
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN-TLRPQIP 1108 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~-~lrpeip 1108 (1157)
|+|+...+.....+.||++.|||||+++ ..+|+.|+|+||+|+|||+|++|+.||......+++..+..+ ...+.++
T Consensus 160 GfAR~L~~~~~a~tlcGSplYMAPEV~~--~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~ 237 (429)
T KOG0595|consen 160 GFARFLQPGSMAETLCGSPLYMAPEVIM--SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLP 237 (429)
T ss_pred chhhhCCchhHHHHhhCCccccCHHHHH--hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchh
Confidence 9999988888878899999999999997 357899999999999999999999999998888888776544 4455677
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
..++..+.+|+...|+.++..|-++.+...+.
T Consensus 238 ~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 238 AELSNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred hhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 77888889999999999999998887766543
No 7
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-44 Score=407.33 Aligned_cols=258 Identities=25% Similarity=0.400 Sum_probs=227.2
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVP 948 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~ 948 (1157)
....||.+.+.||.|+|++||+|+. .++.||||++.+.-+.. +...+.+.+|...|.+| .||.|++||..|+
T Consensus 70 k~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iik-----e~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQ 144 (604)
T KOG0592|consen 70 KTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIK-----EKKVKYVTREKEALTQLSGHPGIVKLYFTFQ 144 (604)
T ss_pred CChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHh-----hcccchhhHHHHHHHHhhCCCCeEEEEEEee
Confidence 3457999999999999999999988 47789999998864432 23357788999999999 8999999999999
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
+ ...+|+|+||+++|+|.++|++.+ .|++...++++.||+.||+|||++|||||||||||||++ .++++||+|
T Consensus 145 D--~~sLYFvLe~A~nGdll~~i~K~G-sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd----~dmhikITD 217 (604)
T KOG0592|consen 145 D--EESLYFVLEYAPNGDLLDLIKKYG-SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLD----KDGHIKITD 217 (604)
T ss_pred c--ccceEEEEEecCCCcHHHHHHHhC-cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEc----CCCcEEEee
Confidence 9 668999999999999999998765 599999999999999999999999999999999999999 889999999
Q ss_pred cCCcccccCC------------ccc--CCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHH
Q 001103 1029 FGLSRIKCNT------------LVS--GGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAI 1094 (1157)
Q Consensus 1029 FGLAkl~~~~------------~~s--ts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eei 1094 (1157)
||-|+..... ... .+++||..|.+||++... ..+..+|||+||||||+|+.|++||.+.+...+
T Consensus 218 FGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~--~~~~~sDiWAlGCilyQmlaG~PPFra~Neyli 295 (604)
T KOG0592|consen 218 FGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDS--PAGPSSDLWALGCILYQMLAGQPPFRAANEYLI 295 (604)
T ss_pred ccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCC--CCCcccchHHHHHHHHHHhcCCCCCccccHHHH
Confidence 9999854321 112 458999999999999854 568889999999999999999999999999999
Q ss_pred HHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1095 IGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1095 l~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
++.|+...+ .++..+++.+++||+++|..||.+|.+..+|-+|+.+-.-
T Consensus 296 FqkI~~l~y--~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V 344 (604)
T KOG0592|consen 296 FQKIQALDY--EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV 344 (604)
T ss_pred HHHHHHhcc--cCCCCCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence 999987655 5788999999999999999999999999999998655433
No 8
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-42 Score=390.28 Aligned_cols=259 Identities=27% Similarity=0.415 Sum_probs=225.0
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeec
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPN 949 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~d 949 (1157)
....|++.+.||+|+||+|++|++ .+..||||++.+....... ....+.+.+|+.+++.+. ||||+++++++..
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~---~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t 91 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS---QKLDELIKREISILRRLRSHPNIIRLLEVFAT 91 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc---cccchhhHHHHHHHHHhccCCCEeEEEEEEec
Confidence 346899999999999999999988 5788999987765222111 123456678999999999 9999999999988
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCC-CeEEEEe
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQR-PICKVGD 1028 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~-g~VKLiD 1028 (1157)
. ..+|+||||+.||+|.+++.+ .+++.+..+..++.||+.||+|||++||+||||||+|||++ .+ +.+||+|
T Consensus 92 ~--~~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld----~~~~~~Kl~D 164 (370)
T KOG0583|consen 92 P--TKIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLD----GNEGNLKLSD 164 (370)
T ss_pred C--CeEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEec----CCCCCEEEec
Confidence 4 459999999999999999988 55688899999999999999999999999999999999999 55 8999999
Q ss_pred cCCcccc-cCCcccCCCCCCCcccCcccccCCC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCC
Q 001103 1029 FGLSRIK-CNTLVSGGVRGTLPWMAPELLNGSN-NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1029 FGLAkl~-~~~~~sts~~GTp~YmAPEVL~G~~-~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpe 1106 (1157)
||++... ........+|||+.|+|||++.+.. |. +.++||||+||+||.|++|+.||.......+...+....+ .
T Consensus 165 FG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~-g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~--~ 241 (370)
T KOG0583|consen 165 FGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYS-GKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEF--K 241 (370)
T ss_pred cccccccCCCCCcccCCCCCcccCCHHHhCCCCCcC-CchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCc--c
Confidence 9999877 4556677799999999999999764 32 5899999999999999999999999887777777765544 5
Q ss_pred CCCCC-cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1107 IPERC-DPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1107 ip~~i-SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+|..+ +++++.||.+||..||.+|+++.+|+.+.|...
T Consensus 242 ~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 242 IPSYLLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK 280 (370)
T ss_pred CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence 77777 999999999999999999999999999998876
No 9
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-43 Score=377.36 Aligned_cols=256 Identities=24% Similarity=0.422 Sum_probs=226.4
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
....+|++++.||.|+||.|.+++.+ |..||+|++++..... -..++...+|..+|+.+.||+++++++.+.+
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVk-----lKQveH~~nEk~vL~~v~~PFlv~l~~t~~d 115 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVK-----LKQVEHTHNEKRVLKAVSHPFLVKLYGTFKD 115 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHH-----HHHHHHHhhHHHHHhhccCceeEEEEEeecc
Confidence 45578999999999999999999884 6779999998864432 2235678899999999999999999999988
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
...+||||||++||.|..++++.++ +++..++.++.||+.||+|||+++|++|||||||||+| .+|++||+||
T Consensus 116 --~~~lymvmeyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD----~~G~iKitDF 188 (355)
T KOG0616|consen 116 --NSNLYMVMEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD----QNGHIKITDF 188 (355)
T ss_pred --CCeEEEEEeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec----cCCcEEEEec
Confidence 6799999999999999999976654 89999999999999999999999999999999999999 8999999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
|+|+..... +.+.||||.|+|||+++.+ .|..++|||||||++|||+.|.+||...+...++..|+...+. +|.
T Consensus 189 GFAK~v~~r--T~TlCGTPeYLAPEii~sk--~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~--fP~ 262 (355)
T KOG0616|consen 189 GFAKRVSGR--TWTLCGTPEYLAPEIIQSK--GYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVK--FPS 262 (355)
T ss_pred cceEEecCc--EEEecCCccccChHHhhcC--CCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCccc--CCc
Confidence 999876554 4458999999999999965 5788999999999999999999999999999999999988774 788
Q ss_pred CCcHHHHHHHHHHhccCCCCC-----CCHHHHHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAAR-----PSFTEITNRLRVMST 1145 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskR-----PSaeELLe~Lr~Lk~ 1145 (1157)
.+++++++||+.+|+.|-.+| ....+|.+|.|+-..
T Consensus 263 ~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v 303 (355)
T KOG0616|consen 263 YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGV 303 (355)
T ss_pred ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcccccc
Confidence 899999999999999999999 355677777666543
No 10
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-42 Score=401.46 Aligned_cols=254 Identities=25% Similarity=0.434 Sum_probs=223.2
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEECC--ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeee
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWRG--TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVV 947 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~kG--t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf 947 (1157)
.+...+|.+++.||+|+||+|++++.++ ..||||+++|.....+.. ++....|.+|+.... ||.++++|..|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~-----Ve~~~~EkrI~~la~~HPFL~~L~~~f 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDE-----VESLMCEKRIFELANRHPFLVNLFSCF 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceecccc-----HHHHHHHHHHHHHhccCCeEeeccccc
Confidence 3456799999999999999999999864 459999999987766543 567788999988875 99999999999
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
++ ..++|+||||+.||++..+.+ .+.+++..+..|+++++.||.|||++||||||||.+|||+| .+|++||+
T Consensus 439 QT--~~~l~fvmey~~Ggdm~~~~~--~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD----~eGh~kiA 510 (694)
T KOG0694|consen 439 QT--KEHLFFVMEYVAGGDLMHHIH--TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD----TEGHVKIA 510 (694)
T ss_pred cc--CCeEEEEEEecCCCcEEEEEe--cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc----ccCcEEec
Confidence 99 679999999999999655543 34599999999999999999999999999999999999999 88999999
Q ss_pred ecCCccccc-CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCC
Q 001103 1028 DFGLSRIKC-NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1028 DFGLAkl~~-~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpe 1106 (1157)
|||+++..- ....+.++||||.|||||++.+. .|+..+|||||||+|||||.|+.||.+.+.++++..|+.... .
T Consensus 511 DFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~--~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~--~ 586 (694)
T KOG0694|consen 511 DFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQ--SYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEV--R 586 (694)
T ss_pred ccccccccCCCCCccccccCChhhcChhhhccC--cccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCC--C
Confidence 999999644 55567789999999999999965 689999999999999999999999999999999999986644 5
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCC-----HHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPS-----FTEITNRLR 1141 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPS-----aeELLe~Lr 1141 (1157)
+|..++.+..++|+++|+++|++|-. +++|..+..
T Consensus 587 yP~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpF 626 (694)
T KOG0694|consen 587 YPRFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPF 626 (694)
T ss_pred CCCcccHHHHHHHHHHhccCcccccCCCCCCchhhhhCCc
Confidence 78889999999999999999999953 577776643
No 11
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.4e-41 Score=367.90 Aligned_cols=262 Identities=28% Similarity=0.486 Sum_probs=212.4
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCcee
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVV 941 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIV 941 (1157)
+.+...+|++.+.||+|+||.||+|.+. +..||||+++.... ......+.+|+.+++++ +||||+
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~~h~niv 74 (338)
T cd05102 2 WEFPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGAT-------ASEHKALMSELKILIHIGNHLNVV 74 (338)
T ss_pred cccchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccc-------hHHHHHHHHHHHHHHHhccCccee
Confidence 3456678999999999999999999752 34699999875311 11245688999999999 899999
Q ss_pred EEeeeeecCCCCcEEEEEEeecCCcchhhhcccc----------------------------------------------
Q 001103 942 AFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------------------------------------- 975 (1157)
Q Consensus 942 kLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------------------------------------- 975 (1157)
++++++... ...++++|||+++|+|.+++....
T Consensus 75 ~~~~~~~~~-~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (338)
T cd05102 75 NLLGACTKP-NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPST 153 (338)
T ss_pred eEEeEecCC-CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcccccccccc
Confidence 999988653 457899999999999998886421
Q ss_pred ---------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCc-
Q 001103 976 ---------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL- 1039 (1157)
Q Consensus 976 ---------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~- 1039 (1157)
..+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++......
T Consensus 154 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~----~~~~~kl~DfG~a~~~~~~~~ 229 (338)
T cd05102 154 SGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS----ENNVVKICDFGLARDIYKDPD 229 (338)
T ss_pred CcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc----CCCcEEEeecccccccccCcc
Confidence 2367788899999999999999999999999999999998 67789999999997543221
Q ss_pred --ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1040 --VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1040 --~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
......+++.|+|||++.+. .++.++|||||||+||||++ |..||........+...+........+..+++++.
T Consensus 230 ~~~~~~~~~~~~y~aPE~~~~~--~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 307 (338)
T cd05102 230 YVRKGSARLPLKWMAPESIFDK--VYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMRAPENATPEIY 307 (338)
T ss_pred hhcccCCCCCccccCcHHhhcC--CCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCCCCCCCCHHHH
Confidence 12223467889999998754 57899999999999999997 99999876654444444444444556778899999
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
+||.+||+.||.+|||+.++++.|+.+..
T Consensus 308 ~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 308 RIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 99999999999999999999999988764
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=9.8e-44 Score=382.80 Aligned_cols=256 Identities=22% Similarity=0.419 Sum_probs=219.4
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|+++++||.|+||+||++.+ +|..+|.|.++... . .+...+.+..|+.+|++|+|||||++|++-..+.
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~-m-----d~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~ 91 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGM-M-----DAKARQDCVKEISLLKQLNHPNIVQYYAHSFIED 91 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhh-c-----cHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhcc
Confidence 35789999999999999999877 68889999988442 2 2334678899999999999999999999655554
Q ss_pred CCcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHH--CC--ceeccCCccceeeccCCCCCCeE
Q 001103 952 GGTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHM--KN--IVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHS--kG--IIHRDLKPENILLd~dd~e~g~V 1024 (1157)
...++||||||.+|+|..+++. ..+.++++.+|+++.|++.||..+|+ .. |+||||||.||+++ .++.|
T Consensus 92 ~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~----~~gvv 167 (375)
T KOG0591|consen 92 NEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT----ANGVV 167 (375)
T ss_pred chhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc----CCCce
Confidence 6679999999999999988864 45779999999999999999999999 44 99999999999999 88899
Q ss_pred EEEecCCcccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC
Q 001103 1025 KVGDFGLSRIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL 1103 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l 1103 (1157)
||+|||+++..... ....+++|||.||+||++.+. +|+.++|||||||++|||+.-++||.+.....+...|..+.+
T Consensus 168 KLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~--~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~ 245 (375)
T KOG0591|consen 168 KLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHES--GYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDY 245 (375)
T ss_pred eeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcC--CCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCC
Confidence 99999999976554 345678999999999999865 689999999999999999999999999988888888887766
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1104 RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1104 rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
++......|..+..||..|+..||+.||+.-.++..+.
T Consensus 246 ~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 246 PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 54333678999999999999999999998544444443
No 13
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=4e-41 Score=359.12 Aligned_cols=263 Identities=23% Similarity=0.378 Sum_probs=222.3
Q ss_pred cccCCCeeEE--EEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 871 IIKDSDLEEL--QELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 871 ~I~~sdYeIL--rkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
.+...+++.. ..||+|++|.||+|+++|+.||||++++.. .......+.+.+|+.+|++++||||+++++++.
T Consensus 14 ~i~~~~i~~~~~~~i~~g~~~~v~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~ 88 (283)
T PHA02988 14 CIESDDIDKYTSVLIKENDQNSIYKGIFNNKEVIIRTFKKFH-----KGHKVLIDITENEIKNLRRIDSNNILKIYGFII 88 (283)
T ss_pred ecCHHHcCCCCCeEEeeCCceEEEEEEECCEEEEEEeccccc-----cccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEE
Confidence 3334444444 679999999999999999999999987642 122334577889999999999999999999987
Q ss_pred c--CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeeccCCCCCCeEE
Q 001103 949 N--GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMK-NIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 949 d--e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSk-GIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
+ +....+++||||+.+|+|.+++.+. +.+++...+.++.|++.||.|||+. +++||||||+|||++ .++.+|
T Consensus 89 ~~~~~~~~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~----~~~~~k 163 (283)
T PHA02988 89 DIVDDLPRLSLILEYCTRGYLREVLDKE-KDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVT----ENYKLK 163 (283)
T ss_pred ecccCCCceEEEEEeCCCCcHHHHHhhC-CCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEEC----CCCcEE
Confidence 6 4445789999999999999999764 4588899999999999999999984 999999999999998 678999
Q ss_pred EEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1026 VGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1026 LiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
|+|||+++....... ...|+..|+|||++.+....++.++|||||||++|||++|+.||...........+.....++
T Consensus 164 l~dfg~~~~~~~~~~--~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~ 241 (283)
T PHA02988 164 IICHGLEKILSSPPF--KNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSL 241 (283)
T ss_pred EcccchHhhhccccc--cccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCC
Confidence 999999875443322 346899999999997633468999999999999999999999999888777777776666667
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
.++..+++++++||.+||+.||.+|||+.++++.|..+..
T Consensus 242 ~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 242 KLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred CCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 7777789999999999999999999999999999998763
No 14
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-42 Score=380.67 Aligned_cols=257 Identities=28% Similarity=0.459 Sum_probs=217.6
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|...+.||+|+||+||++... |...|||.+.... ... .+.+.+|+++|++|+|||||+++|.......
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~----~~~----~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~ 88 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED----SPT----SESLEREIRILSRLNHPNIVQYYGSSSSREN 88 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeeccc----chh----HHHHHHHHHHHHhCCCCCEEeeCCccccccC
Confidence 46778899999999999999885 6889999887641 111 5678899999999999999999997544322
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCC-CCeEEEEecCC
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQ-RPICKVGDFGL 1031 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e-~g~VKLiDFGL 1031 (1157)
..++|+|||+++|+|.+++++.+..+++..++.+..|+++||+|||++|||||||||+|||++ . ++.+||+|||+
T Consensus 89 ~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~----~~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 89 DEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD----PSNGDVKLADFGL 164 (313)
T ss_pred eeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe----CCCCeEEeccCcc
Confidence 478999999999999999988765799999999999999999999999999999999999998 5 68999999999
Q ss_pred cccccC----CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCC-CChhHHHHHhhhcCCCCC
Q 001103 1032 SRIKCN----TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYAN-MHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1032 Akl~~~----~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g-~~~eeil~~Il~~~lrpe 1106 (1157)
++.... ......+.||+.|||||++... .....++|||||||++.||+||+.||.. ......+..+......|.
T Consensus 165 a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g-~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ 243 (313)
T KOG0198|consen 165 AKKLESKGTKSDSELSVQGTPNYMAPEVIRNG-EVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPE 243 (313)
T ss_pred ccccccccccccccccccCCccccCchhhcCC-CcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCC
Confidence 986553 2223457899999999999842 2233589999999999999999999998 455555555655556678
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+|..+++++++||.+|+++||.+|||+.++|+++....
T Consensus 244 ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~ 281 (313)
T KOG0198|consen 244 IPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQ 281 (313)
T ss_pred CCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhc
Confidence 99999999999999999999999999999999987654
No 15
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=5.3e-42 Score=392.14 Aligned_cols=261 Identities=25% Similarity=0.372 Sum_probs=223.7
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
.+..++|++++.||+|+||.||+|+. +|..+|+|++++..+..+.. +..+..|..+|...++|.||+||-.|+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Q-----v~hV~aERdiL~~~ds~~vVKLyYsFQ 211 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQ-----VEHVRAERDILAEVDSPWVVKLYYSFQ 211 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhh-----HHHHHHHHHHhhhcCCCcEEEEEEEec
Confidence 35678999999999999999999987 47779999999986654432 577889999999999999999999999
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
+ ..++||||||++||++..+|.+.+ .|++..++.++.+++.|++.||+.|+|||||||+|+||| ..|++||+|
T Consensus 212 D--~~~LYLiMEylPGGD~mTLL~~~~-~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD----~~GHiKLSD 284 (550)
T KOG0605|consen 212 D--KEYLYLIMEYLPGGDMMTLLMRKD-TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLID----AKGHIKLSD 284 (550)
T ss_pred C--CCeeEEEEEecCCccHHHHHHhcC-cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeec----CCCCEeecc
Confidence 9 679999999999999999998765 499999999999999999999999999999999999999 889999999
Q ss_pred cCCcccccC----------------------C--c-----c-------------------cCCCCCCCcccCcccccCCC
Q 001103 1029 FGLSRIKCN----------------------T--L-----V-------------------SGGVRGTLPWMAPELLNGSN 1060 (1157)
Q Consensus 1029 FGLAkl~~~----------------------~--~-----~-------------------sts~~GTp~YmAPEVL~G~~ 1060 (1157)
|||+..... . . . ..+.+|||.|+|||++.+.
T Consensus 285 FGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~k- 363 (550)
T KOG0605|consen 285 FGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGK- 363 (550)
T ss_pred ccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcC-
Confidence 999862110 0 0 0 1124799999999999976
Q ss_pred CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC--CCCCCCCCCcHHHHHHHHHHhccCCCCCC---CHHH
Q 001103 1061 NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT--LRPQIPERCDPEWRKLMEECWSFNPAARP---SFTE 1135 (1157)
Q Consensus 1061 ~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~--lrpeip~~iSpeLrdLIkrCLqkDPskRP---SaeE 1135 (1157)
.|+..+|||||||||||||.|.+||.+....+....|+.-. +..+-...+++++++||.+||. ||.+|- +++|
T Consensus 364 -gY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~E 441 (550)
T KOG0605|consen 364 -GYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEE 441 (550)
T ss_pred -CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHH
Confidence 47899999999999999999999999999999999987654 3333445578999999999999 999994 7999
Q ss_pred HHHHHHHHHHH
Q 001103 1136 ITNRLRVMSTA 1146 (1157)
Q Consensus 1136 LLe~Lr~Lk~a 1146 (1157)
|-+|.++-...
T Consensus 442 IK~HPfF~~v~ 452 (550)
T KOG0605|consen 442 IKKHPFFKGVD 452 (550)
T ss_pred HhcCCccccCC
Confidence 99887765433
No 16
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.3e-41 Score=359.24 Aligned_cols=251 Identities=23% Similarity=0.361 Sum_probs=214.8
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||.||+++++ ++.||||++...... .......+.+|+.+++.++||||+++++++.+ .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~ 73 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI-----RLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHD--Q 73 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-----hhHHHHHHHHHHHHHHhCCCCcHhhhHhhhcc--C
Confidence 37899999999999999999985 778999998754211 11224567899999999999999999998877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+++||||+.+++|.+++.+.+ .+++..++.++.|++.||+|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~----~~~~~kl~Dfg~~ 148 (291)
T cd05612 74 RFLYMLMEYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD----KEGHIKLTDFGFA 148 (291)
T ss_pred CeEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC----CCCCEEEEecCcc
Confidence 68999999999999999987544 588999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCc
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iS 1112 (1157)
....... ...+||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+.... ..++..++
T Consensus 149 ~~~~~~~--~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~ 222 (291)
T cd05612 149 KKLRDRT--WTLCGTPEYLAPEVIQSK--GHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGK--LEFPRHLD 222 (291)
T ss_pred hhccCCc--ccccCChhhcCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--cCCCccCC
Confidence 7654322 235799999999999864 56899999999999999999999999888777777776554 34667789
Q ss_pred HHHHHHHHHHhccCCCCCCC-----HHHHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARPS-----FTEITNRLRVM 1143 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRPS-----aeELLe~Lr~L 1143 (1157)
+.+++||++||+.||.+||+ +.+++++.|..
T Consensus 223 ~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 223 LYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred HHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence 99999999999999999995 99999998764
No 17
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=4.1e-42 Score=372.96 Aligned_cols=254 Identities=24% Similarity=0.351 Sum_probs=214.0
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
+.|+.+.++|+|+||+||+|+++ |+.||||++... ++.....+-.+||+++|++|+|||+|.++.+|.. .
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es------edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrr--k 73 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES------EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRR--K 73 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccC------CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHh--c
Confidence 35888999999999999999984 777999988753 2334455667899999999999999999999987 6
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+++|+|||+. ++.+.|.+....++...+..+++|++.|+.|||++++||||||||||||+ .++.+||||||+|
T Consensus 74 rklhLVFE~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit----~~gvvKLCDFGFA 148 (396)
T KOG0593|consen 74 RKLHLVFEYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT----QNGVVKLCDFGFA 148 (396)
T ss_pred ceeEEEeeecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe----cCCcEEeccchhh
Confidence 789999999987 66666767666799999999999999999999999999999999999999 8899999999999
Q ss_pred cccc-CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc--C-------
Q 001103 1033 RIKC-NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN--T------- 1102 (1157)
Q Consensus 1033 kl~~-~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~--~------- 1102 (1157)
+... +....+-++.|.+|+|||.+.|. ..|+..+||||+||++.||++|.+.|++..+-+.+..|... .
T Consensus 149 R~L~~pgd~YTDYVATRWYRaPELLvGD-tqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~ 227 (396)
T KOG0593|consen 149 RTLSAPGDNYTDYVATRWYRAPELLVGD-TQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQS 227 (396)
T ss_pred HhhcCCcchhhhhhhhhhccChhhhccc-CcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHH
Confidence 9776 55566668899999999999974 57899999999999999999999999998877665555320 0
Q ss_pred ----------CCCCCC----------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1103 ----------LRPQIP----------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1103 ----------lrpeip----------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.+.+-+ ..++..+.+|++.||+.||++|++-++++.+-.+
T Consensus 228 iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~H~yF 287 (396)
T KOG0593|consen 228 IFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLHHPYF 287 (396)
T ss_pred HhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhcChHH
Confidence 110101 1245678899999999999999999999998655
No 18
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=388.63 Aligned_cols=260 Identities=37% Similarity=0.640 Sum_probs=227.2
Q ss_pred cccccCCCeeEEEEecccCcEEEEEEEECCc-eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 869 LQIIKDSDLEELQELGSGTFGTVYRGKWRGT-DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 869 i~~I~~sdYeILrkLGsGsFGtVYlAr~kGt-~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
.+++....+..+++||+|-||.||+|+|+++ .||+|.++...+. .+.|.+|+++|++|+|++||++|+++
T Consensus 200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~---------~~~f~~Ea~iMk~L~H~~lV~l~gV~ 270 (468)
T KOG0197|consen 200 PWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMS---------PEAFLREAQIMKKLRHEKLVKLYGVC 270 (468)
T ss_pred CeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccccC---------hhHHHHHHHHHHhCcccCeEEEEEEE
Confidence 3455556677789999999999999999987 7999999875322 25678999999999999999999999
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhcc-ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLAR-KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr-~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
.. ++.+|||||||..|+|.++|+. .+..+...+.+.++.||++|++||+++++|||||-..||||+ ++..+||
T Consensus 271 ~~--~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~----~~~~vKI 344 (468)
T KOG0197|consen 271 TK--QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVD----EDLVVKI 344 (468)
T ss_pred ec--CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeec----cCceEEE
Confidence 88 4479999999999999999986 567799999999999999999999999999999999999999 7889999
Q ss_pred EecCCcccccCCcc--cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCC
Q 001103 1027 GDFGLSRIKCNTLV--SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTL 1103 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~--sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~l 1103 (1157)
+|||+|+...+... ..+-.-...|.|||.+.- ..++.|+|||||||+||||+| |+.||.++...+++..+. .++
T Consensus 345 sDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~--~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le-~Gy 421 (468)
T KOG0197|consen 345 SDFGLARLIGDDEYTASEGGKFPIKWTAPEALNY--GKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLE-RGY 421 (468)
T ss_pred cccccccccCCCceeecCCCCCCceecCHHHHhh--CCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHh-ccC
Confidence 99999996444332 233335667999999984 478999999999999999999 999999999998887774 667
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1104 RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1104 rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
+.+-|..||+++.+||..||..+|++|||++.+...|..+...
T Consensus 422 Rlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 422 RLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred cCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 7788999999999999999999999999999999888877653
No 19
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.9e-40 Score=351.77 Aligned_cols=255 Identities=20% Similarity=0.285 Sum_probs=208.7
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|++++.||+|+||.||++.+ .++.||||++.+..... ......+.+|++++++++|++|+++++.+.+ .+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~--~~ 73 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-----RKGEAMALNEKRILEKVNSRFVVSLAYAYET--KD 73 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh-----hhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc--CC
Confidence 378899999999999999987 47889999987653211 1123457789999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
.+++||||+.+|+|..++... ...+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~----~~~~~kl~Dfg~~ 149 (285)
T cd05631 74 ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD----DRGHIRISDLGLA 149 (285)
T ss_pred eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC----CCCCEEEeeCCCc
Confidence 899999999999998877543 34589999999999999999999999999999999999998 6778999999999
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh--cCCCCCCCCC
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS--NTLRPQIPER 1110 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~--~~lrpeip~~ 1110 (1157)
.............||..|+|||++.+. .++.++|||||||++|+|++|+.||...........+.. ......++..
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (285)
T cd05631 150 VQIPEGETVRGRVGTVGYMAPEVINNE--KYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEK 227 (285)
T ss_pred EEcCCCCeecCCCCCCCccCHhhhcCC--CCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCcc
Confidence 865444444456799999999999854 578999999999999999999999987554322222211 1223346667
Q ss_pred CcHHHHHHHHHHhccCCCCCCC-----HHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPS-----FTEITNRLRVM 1143 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPS-----aeELLe~Lr~L 1143 (1157)
+++++.+||.+||+.||.+||+ +++++++.+..
T Consensus 228 ~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~ 265 (285)
T cd05631 228 FSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFK 265 (285)
T ss_pred CCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhc
Confidence 8999999999999999999987 89999987654
No 20
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.5e-41 Score=364.63 Aligned_cols=252 Identities=27% Similarity=0.387 Sum_probs=215.6
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
...+|++.+.||+|+||.||+|+++ ++.||||++++..... ......+.+|+.++++++||||+++++.+.+
T Consensus 16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~- 89 (329)
T PTZ00263 16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILK-----MKQVQHVAQEKSILMELSHPFIVNMMCSFQD- 89 (329)
T ss_pred CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhh-----hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc-
Confidence 3468999999999999999999984 6779999998642211 1234678899999999999999999999987
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
.+.+|+||||+.+++|.+++.+.+ .+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||
T Consensus 90 -~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~----~~~~~kl~Dfg 163 (329)
T PTZ00263 90 -ENRVYFLLEFVVGGELFTHLRKAG-RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD----NKGHVKVTDFG 163 (329)
T ss_pred -CCEEEEEEcCCCCChHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC----CCCCEEEeecc
Confidence 568999999999999999987544 578889999999999999999999999999999999998 77899999999
Q ss_pred CcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCC
Q 001103 1031 LSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPER 1110 (1157)
Q Consensus 1031 LAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~ 1110 (1157)
++....... ...+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.........+.... ..++..
T Consensus 164 ~~~~~~~~~--~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~--~~~p~~ 237 (329)
T PTZ00263 164 FAKKVPDRT--FTLCGTPEYLAPEVIQSK--GHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGR--LKFPNW 237 (329)
T ss_pred CceEcCCCc--ceecCChhhcCHHHHcCC--CCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCC--cCCCCC
Confidence 997654332 235799999999999864 46889999999999999999999999887777777766543 346777
Q ss_pred CcHHHHHHHHHHhccCCCCCCC-----HHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPS-----FTEITNRLRV 1142 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPS-----aeELLe~Lr~ 1142 (1157)
+++.+++||.+||+.||.+||+ +++++++.+.
T Consensus 238 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f 274 (329)
T PTZ00263 238 FDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYF 274 (329)
T ss_pred CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCcc
Confidence 8999999999999999999986 7999998765
No 21
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.6e-40 Score=360.41 Aligned_cols=253 Identities=24% Similarity=0.337 Sum_probs=212.2
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++++.||+|+||.||+|++. +..||||++++.... .......+.+|+.+++.++||||+++++++.. .
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--~ 73 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF-----KLNEVRHVLTERDILTTTKSEWLVKLLYAFQD--D 73 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh-----hhhHHHHHHHHHHHHHhCCCCCCccEEEEEEc--C
Confidence 37999999999999999999984 678999999865221 11234678889999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...|+||||+++++|.+++...+ .+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||++
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~----~~~~~kL~Dfg~a 148 (333)
T cd05600 74 EYLYLAMEYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID----ASGHIKLTDFGLS 148 (333)
T ss_pred CEEEEEEeCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC----CCCCEEEEeCcCC
Confidence 68999999999999999996543 588999999999999999999999999999999999998 6789999999999
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC----
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP---- 1108 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip---- 1108 (1157)
..... .....+||+.|+|||++.+. .++.++|||||||+||||++|+.||......+....+.........+
T Consensus 149 ~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 224 (333)
T cd05600 149 KGIVT--YANSVVGSPDYMAPEVLRGK--GYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDD 224 (333)
T ss_pred ccccc--ccCCcccCccccChhHhcCC--CCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCc
Confidence 75443 23446799999999999865 67899999999999999999999999887766665554322111111
Q ss_pred --CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1109 --ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1109 --~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
..+++++.+||.+||+.+|.+||++++++++.+..
T Consensus 225 ~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~ 261 (333)
T cd05600 225 PRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK 261 (333)
T ss_pred cccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence 24689999999999999999999999999987654
No 22
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-41 Score=392.07 Aligned_cols=255 Identities=27% Similarity=0.395 Sum_probs=228.4
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.-|+..+.||.|+.|.|-+|++ +|+..|||++.+..... +.....+.+|+-||+.|.|||++++|++|.+ +
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s-----~s~~~~IerEIviMkLi~HpnVl~LydVwe~--~ 84 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELS-----SSQPAGIEREIVIMKLIEHPNVLRLYDVWEN--K 84 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccc-----cccccchhhhhHHHHHhcCCCeeeeeeeecc--C
Confidence 3578889999999999999998 68899999998763221 2234678899999999999999999999988 6
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|+|+||++||.|.++|.++++ +++..+.++++||+.|+.|||..+|+||||||+|+|++ ..+.+||+|||+|
T Consensus 85 ~~lylvlEyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd----~~~nIKIADFGMA 159 (786)
T KOG0588|consen 85 QHLYLVLEYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLD----VKNNIKIADFGMA 159 (786)
T ss_pred ceEEEEEEecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhh----cccCEeeecccee
Confidence 799999999999999999987765 78888999999999999999999999999999999999 6667999999999
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCc
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iS 1112 (1157)
.+..+.....+-||+|.|+|||+++|.+|. +.++||||-|||||.||+|++||.+.+...++..+..+.+ ++|..++
T Consensus 160 sLe~~gklLeTSCGSPHYA~PEIV~G~pYd-G~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f--~MPs~Is 236 (786)
T KOG0588|consen 160 SLEVPGKLLETSCGSPHYAAPEIVSGRPYD-GRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVF--EMPSNIS 236 (786)
T ss_pred ecccCCccccccCCCcccCCchhhcCCCCC-CCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcc--cCCCcCC
Confidence 988888887888999999999999998765 7899999999999999999999998888888877776655 5779999
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+++++||.+||..||++|.|+++|++|++...
T Consensus 237 ~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g 268 (786)
T KOG0588|consen 237 SEAQDLLRRMLDVDPSTRITTEEILKHPFLSG 268 (786)
T ss_pred HHHHHHHHHHhccCccccccHHHHhhCchhhc
Confidence 99999999999999999999999999988654
No 23
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-41 Score=381.18 Aligned_cols=266 Identities=25% Similarity=0.400 Sum_probs=226.2
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCCh------hHHHHHHHHHHHHHHHHhCCCCceeEEee
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSS------EQEWLIKEFWREAHIISNLHHPNVVAFYG 945 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~------e~e~likqflrEIkILK~L~HPNIVkLyg 945 (1157)
..+|++++.||+|.||.|.+|+. .++.||||++.+..+..... ....-++++.+|+.+|++|.|||||+|+.
T Consensus 96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiE 175 (576)
T KOG0585|consen 96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIE 175 (576)
T ss_pred hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEE
Confidence 46899999999999999999998 47779999998765433211 11112468899999999999999999999
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhcccccc-ccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKDRI-LDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~-L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
+..+.....+|||+|||..|.+.+.= ..+. +.+.++++|+++++.||+|||.+|||||||||+|+|++ +.++|
T Consensus 176 vLDDP~s~~~YlVley~s~G~v~w~p--~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~----~~g~V 249 (576)
T KOG0585|consen 176 VLDDPESDKLYLVLEYCSKGEVKWCP--PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLS----SDGTV 249 (576)
T ss_pred eecCcccCceEEEEEeccCCccccCC--CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEc----CCCcE
Confidence 99998889999999999999886553 2333 89999999999999999999999999999999999999 77999
Q ss_pred EEEecCCcccc------cCCcccCCCCCCCcccCcccccCCC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHH
Q 001103 1025 KVGDFGLSRIK------CNTLVSGGVRGTLPWMAPELLNGSN--NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIG 1096 (1157)
Q Consensus 1025 KLiDFGLAkl~------~~~~~sts~~GTp~YmAPEVL~G~~--~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~ 1096 (1157)
||+|||.+... .........+|||.|+|||.+.+.. ...+.+.|||||||+||.|+.|+.||-+....+++.
T Consensus 250 KIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~ 329 (576)
T KOG0585|consen 250 KISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD 329 (576)
T ss_pred EeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence 99999998743 1112222367999999999987632 234678999999999999999999999999999999
Q ss_pred HhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1097 GILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1097 ~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
.|+...+..+....+.+.+++||++||.+||.+|.++.+|..|+|....
T Consensus 330 KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 330 KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecceeccC
Confidence 9998888776666789999999999999999999999999999987654
No 24
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=8.2e-41 Score=362.39 Aligned_cols=246 Identities=26% Similarity=0.394 Sum_probs=208.4
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATV 958 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLV 958 (1157)
+.||+|+||.||++++ .|+.||||++++..... ......+.+|+.++++++||||+++++.+.. ...+|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~~~~lv 73 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIA-----KDEVAHTLTESRVLQNTRHPFLTALKYSFQT--HDRLCFV 73 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----hHHHHHHHHHHHHHHhCCCCCCCCEEEEEEc--CCEEEEE
Confidence 3699999999999987 47789999998642211 2224567789999999999999999999887 5689999
Q ss_pred EEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-C
Q 001103 959 TEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC-N 1037 (1157)
Q Consensus 959 MEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~-~ 1037 (1157)
|||+.+++|..++.+. +.+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++... .
T Consensus 74 ~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~----~~~~~kl~DfG~a~~~~~~ 148 (323)
T cd05571 74 MEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD----KDGHIKITDFGLCKEGISD 148 (323)
T ss_pred EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC----CCCCEEEeeCCCCcccccC
Confidence 9999999999888654 4588999999999999999999999999999999999998 67789999999987532 2
Q ss_pred CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHH
Q 001103 1038 TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRK 1117 (1157)
Q Consensus 1038 ~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrd 1117 (1157)
.......+||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+.... ..++..+++++++
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~ 224 (323)
T cd05571 149 GATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--IRFPRTLSPEAKS 224 (323)
T ss_pred CCcccceecCccccChhhhcCC--CCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHHHHH
Confidence 2233456799999999999754 57899999999999999999999999887777666665443 3567789999999
Q ss_pred HHHHHhccCCCCCC-----CHHHHHHHHHH
Q 001103 1118 LMEECWSFNPAARP-----SFTEITNRLRV 1142 (1157)
Q Consensus 1118 LIkrCLqkDPskRP-----SaeELLe~Lr~ 1142 (1157)
||.+||++||++|| ++.+++++.+.
T Consensus 225 li~~~L~~dP~~R~~~~~~~~~~ll~h~~f 254 (323)
T cd05571 225 LLAGLLKKDPKQRLGGGPEDAKEIMEHRFF 254 (323)
T ss_pred HHHHHccCCHHHcCCCCCCCHHHHHcCCCc
Confidence 99999999999999 89999998664
No 25
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.8e-40 Score=349.97 Aligned_cols=253 Identities=25% Similarity=0.371 Sum_probs=205.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|+++++||+|+||+||+|+.+ +..||+|+++...... ....+.+|+.++++++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~-- 74 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-------APCTAIREVSLLKNLKHANIVTLHDIIHT-- 74 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCC-------cchhHHHHHHHHHhCCCCCEeeEEEEEcC--
Confidence 468999999999999999999884 6779999987542111 12456789999999999999999999877
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
....++||||+.+ +|.+++...+..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 75 ~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~----~~~~~kl~DfG~ 149 (288)
T cd07871 75 ERCLTLVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN----EKGELKLADFGL 149 (288)
T ss_pred CCeEEEEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC----CCCCEEECcCcc
Confidence 5689999999975 89888876666688999999999999999999999999999999999998 677899999999
Q ss_pred cccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC-------
Q 001103 1032 SRIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL------- 1103 (1157)
Q Consensus 1032 Akl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l------- 1103 (1157)
+...... .......|++.|+|||++.+. ..++.++|||||||++|+|++|++||.+....+.+..+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (288)
T cd07871 150 ARAKSVPTKTYSNEVVTLWYRPPDVLLGS-TEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETW 228 (288)
T ss_pred eeeccCCCccccCceecccccChHHhcCC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHh
Confidence 8754322 223345689999999998753 3578999999999999999999999988766554443321100
Q ss_pred -------------CC--------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1104 -------------RP--------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1104 -------------rp--------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+ .....+++++++||.+||++||.+|||+++++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~ 287 (288)
T cd07871 229 PGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSY 287 (288)
T ss_pred hccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCC
Confidence 00 011246788999999999999999999999998764
No 26
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.1e-40 Score=361.40 Aligned_cols=254 Identities=25% Similarity=0.414 Sum_probs=214.3
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||+||+|++. +..||||++++..... ......+.+|++++..++||||+++++++.+ .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~ 73 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK-----RNQIAHVRAERDILADADSPWIVKLYYSFQD--E 73 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh-----ccHHHHHHHHHHHHHhcCCCCccchhhheec--C
Confidence 37999999999999999999985 7889999998653221 1224668889999999999999999999887 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|+||||+.+++|.+++.+. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~----~~~~~kL~Dfg~~ 148 (350)
T cd05573 74 EHLYLVMEYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID----ADGHIKLADFGLC 148 (350)
T ss_pred CeEEEEEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC----CCCCEEeecCCCC
Confidence 6899999999999999999765 4689999999999999999999999999999999999998 7789999999998
Q ss_pred ccccCCc------------------------------ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcC
Q 001103 1033 RIKCNTL------------------------------VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITG 1082 (1157)
Q Consensus 1033 kl~~~~~------------------------------~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTG 1082 (1157)
....... ......||+.|+|||++.+. .++.++|||||||+||+|++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG~il~ell~g 226 (350)
T cd05573 149 KKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT--PYGLECDWWSLGVILYEMLYG 226 (350)
T ss_pred ccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCC--CCCCceeeEecchhhhhhccC
Confidence 7543322 22345699999999999865 678999999999999999999
Q ss_pred CCCCCCCChhHHHHHhhh--cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCC-HHHHHHHHHHH
Q 001103 1083 EEPYANMHCGAIIGGILS--NTLRPQIPERCDPEWRKLMEECWSFNPAARPS-FTEITNRLRVM 1143 (1157)
Q Consensus 1083 k~PF~g~~~eeil~~Il~--~~lrpeip~~iSpeLrdLIkrCLqkDPskRPS-aeELLe~Lr~L 1143 (1157)
+.||...........+.. .....+....+++++.+||.+||. ||.+||+ +++++++.+.-
T Consensus 227 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~ 289 (350)
T cd05573 227 FPPFYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFK 289 (350)
T ss_pred CCCCCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcC
Confidence 999998887777666665 223222233469999999999997 9999999 99999987653
No 27
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9e-42 Score=385.91 Aligned_cols=258 Identities=25% Similarity=0.351 Sum_probs=219.9
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNG 950 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de 950 (1157)
-.+|.++++||.|+||.||+|+. .|..||||.|+++... ..+ -.-+||++.|++|+ |||||++.+++.+.
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s----~ee---~~nLREvksL~kln~hpniikL~Evi~d~ 81 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS----WEE---CMNLREVKSLRKLNPHPNIIKLKEVIRDN 81 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc----HHH---HHHHHHHHHHHhcCCCCcchhhHHHhhcc
Confidence 35789999999999999999987 4777999999876221 111 22368999999998 99999999999885
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
.. .+|+|||||+. +|+++++..++.|++..++.|+.||++||+|+|++|+.||||||||||+. ....+||+|||
T Consensus 82 ~~-~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~----~~~~iKiaDFG 155 (538)
T KOG0661|consen 82 DR-ILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS----GNDVIKIADFG 155 (538)
T ss_pred Cc-eEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec----ccceeEecccc
Confidence 33 89999999976 99999999899999999999999999999999999999999999999998 57799999999
Q ss_pred CcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC--------
Q 001103 1031 LSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT-------- 1102 (1157)
Q Consensus 1031 LAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~-------- 1102 (1157)
+|+........+.++.|.+|+|||++... ..|+.++|+|++|||++|+.+-++.|++....+.+..|..-.
T Consensus 156 LARev~SkpPYTeYVSTRWYRAPEvLLrs-~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 156 LAREVRSKPPYTEYVSTRWYRAPEVLLRS-GYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred cccccccCCCcchhhhcccccchHHhhhc-cccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccc
Confidence 99988777777788999999999998765 568999999999999999999999999988877766664310
Q ss_pred ---------CCCCCC-----------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1103 ---------LRPQIP-----------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1103 ---------lrpeip-----------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
+...+| ..+++++.+||.+||++||.+|||+.+.+++..+...
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~pffq~~ 297 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQHPFFQVG 297 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcCcccccc
Confidence 001111 2268899999999999999999999999998765543
No 28
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.3e-41 Score=375.64 Aligned_cols=253 Identities=26% Similarity=0.450 Sum_probs=227.4
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
-+|++.+.||+|.||.|.++.. .|+.||||.+++.... .+...-.+.+|++||..|+||||+++|.+|.+ .
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIk-----deqDlvhIRREIeIMSsLNHPhII~IyEVFEN--k 125 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIK-----DEQDLVHIRREIEIMSSLNHPHIIQIYEVFEN--K 125 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcc-----cHHHHHHHHHHHHHHhhcCCCceeehhhhhcC--C
Confidence 4788999999999999999976 5889999999886432 23335678999999999999999999999988 6
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+.|||||..+|.|++++.+.+. +++..++.+++||+.|+.|||.++++|||||.+|||++ .++++||+|||++
T Consensus 126 dKIvivMEYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD----~N~NiKIADFGLS 200 (668)
T KOG0611|consen 126 DKIVIVMEYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLD----QNNNIKIADFGLS 200 (668)
T ss_pred ceEEEEEEecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHhhccceecccchhheeec----CCCCeeeeccchh
Confidence 689999999999999999987654 99999999999999999999999999999999999999 8889999999999
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCc
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iS 1112 (1157)
-+........+|||+|.|.+||+++|.+|. +..+|.|||||+||.|+.|..||.+.+-..++.+|..+.++.+ .-+
T Consensus 201 Nly~~~kfLqTFCGSPLYASPEIvNG~PY~-GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP---~~P 276 (668)
T KOG0611|consen 201 NLYADKKFLQTFCGSPLYASPEIVNGTPYK-GPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREP---ETP 276 (668)
T ss_pred hhhccccHHHHhcCCcccCCccccCCCCCC-CCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCC---CCC
Confidence 988888888889999999999999998765 7899999999999999999999999998888888887766532 235
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
....-||++||..+|++|.|+++|..++|.-
T Consensus 277 SdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 277 SDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred chHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 5788999999999999999999999999854
No 29
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=5.4e-40 Score=361.96 Aligned_cols=253 Identities=21% Similarity=0.339 Sum_probs=207.8
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||+||+++.+ ++.||||++++.... .......+.+|+.+++.++||+|+++++.+.+ .
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~--~ 73 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADML-----EKEQVGHIRAERDILVEADSLWVVKMFYSFQD--K 73 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-----HhhHHHHHHHHHHHHHhCCCCCcceEEEEEec--C
Confidence 47899999999999999999884 678999999864221 12234677889999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|+||||+++|+|.+++.+.+ .+++..++.++.|++.||+|||++||+||||||+|||++ ..+.+||+|||++
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~----~~~~vkL~DFGla 148 (363)
T cd05628 74 LNLYLIMEFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD----SKGHVKLSDFGLC 148 (363)
T ss_pred CeEEEEEcCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC----CCCCEEEeeccCc
Confidence 68999999999999999987644 589999999999999999999999999999999999998 6779999999998
Q ss_pred ccccCCc------------------------------------ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHH
Q 001103 1033 RIKCNTL------------------------------------VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAM 1076 (1157)
Q Consensus 1033 kl~~~~~------------------------------------~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVIL 1076 (1157)
+...... .....+||+.|+|||++.+. .++.++|||||||++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~--~~~~~~DvwSlGvil 226 (363)
T cd05628 149 TGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT--GYNKLCDWWSLGVIM 226 (363)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC--CCCCchhhhhhHHHH
Confidence 7432110 11245799999999999754 578999999999999
Q ss_pred HHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCC--CCcHHHHHHHHHHhccCCC---CCCCHHHHHHHHHH
Q 001103 1077 WEIITGEEPYANMHCGAIIGGILSNTLRPQIPE--RCDPEWRKLMEECWSFNPA---ARPSFTEITNRLRV 1142 (1157)
Q Consensus 1077 YELLTGk~PF~g~~~eeil~~Il~~~lrpeip~--~iSpeLrdLIkrCLqkDPs---kRPSaeELLe~Lr~ 1142 (1157)
|||++|+.||.+....+....+........++. .+++++++||.+|+. +|. .||++++|+++.+.
T Consensus 227 ~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f 296 (363)
T cd05628 227 YEMLIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFF 296 (363)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCC
Confidence 999999999998887777777765332223332 368999999999775 444 46899999998554
No 30
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.2e-41 Score=373.81 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=223.8
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEECC--ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKWRG--TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~kG--t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
..+....|++++.||+|.-|+||+++.++ ..+|+|++.+..+..+ ....+...|.+||+.++||.++.||..|
T Consensus 72 ~~l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~r-----kKl~Ra~tE~eIL~~lDHPFlPTLYa~f 146 (459)
T KOG0610|consen 72 GSLGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASR-----KKLKRAQTEREILSLLDHPFLPTLYASF 146 (459)
T ss_pred CccCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhh-----hHHHHHHHHHHHHHhcCCCccchhhhee
Confidence 34555788999999999999999999977 4699999998865543 2356677899999999999999999999
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhcc-ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLAR-KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr-~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
+. ..+.|++||||+||+|..++++ .++.+++..++.++.+++.||+|||..|||+||||||||||. ++|+|.|
T Consensus 147 et--~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvr----edGHIML 220 (459)
T KOG0610|consen 147 ET--DKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVR----EDGHIML 220 (459)
T ss_pred ec--cceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEe----cCCcEEe
Confidence 88 6799999999999999988865 457899999999999999999999999999999999999998 8899999
Q ss_pred EecCCccccc------------------------------------C---------------------CcccCCCCCCCc
Q 001103 1027 GDFGLSRIKC------------------------------------N---------------------TLVSGGVRGTLP 1049 (1157)
Q Consensus 1027 iDFGLAkl~~------------------------------------~---------------------~~~sts~~GTp~ 1049 (1157)
+||.|+.... . ...+.+++||..
T Consensus 221 sDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThE 300 (459)
T KOG0610|consen 221 SDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHE 300 (459)
T ss_pred eeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccc
Confidence 9999875200 0 012335789999
Q ss_pred ccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCC
Q 001103 1050 WMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAA 1129 (1157)
Q Consensus 1050 YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPsk 1129 (1157)
|+|||++.|. ..+.++|||+|||+|||||.|..||.+....+.+..|+...+...-...++-.+++||+++|.+||.+
T Consensus 301 YlAPEvI~G~--GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~k 378 (459)
T KOG0610|consen 301 YLAPEVIRGE--GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSK 378 (459)
T ss_pred cccceeeecC--CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhh
Confidence 9999999976 45889999999999999999999999999999999999887766555578899999999999999999
Q ss_pred CCC----HHHHHHHHH
Q 001103 1130 RPS----FTEITNRLR 1141 (1157)
Q Consensus 1130 RPS----aeELLe~Lr 1141 (1157)
|.. +.+|-+|..
T Consensus 379 Rlg~~rGA~eIK~HpF 394 (459)
T KOG0610|consen 379 RLGSKRGAAEIKRHPF 394 (459)
T ss_pred hhccccchHHhhcCcc
Confidence 987 888877643
No 31
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=3e-40 Score=361.73 Aligned_cols=253 Identities=23% Similarity=0.402 Sum_probs=210.8
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||+||++++. ++.||||++++.... .......+.+|+.+++.++||||+++++++.+ .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~ 73 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML-----EKEQVAHVRAERDILAEADNPWVVKLYYSFQD--E 73 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--C
Confidence 47999999999999999999984 678999999864221 12234667889999999999999999999988 6
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|+||||+.+|+|.+++.+.+ .+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~----~~~~~kl~Dfg~~ 148 (364)
T cd05599 74 NYLYLIMEYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD----AKGHIKLSDFGLC 148 (364)
T ss_pred CeEEEEECCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC----CCCCEEEeecccc
Confidence 68999999999999999987644 589999999999999999999999999999999999998 7789999999998
Q ss_pred ccccCCc---------------------------------------ccCCCCCCCcccCcccccCCCCCCCchhHHHHHH
Q 001103 1033 RIKCNTL---------------------------------------VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFG 1073 (1157)
Q Consensus 1033 kl~~~~~---------------------------------------~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLG 1073 (1157)
....... .....+||+.|+|||++.+. .++.++||||||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlG 226 (364)
T cd05599 149 TGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQT--GYNKECDWWSLG 226 (364)
T ss_pred eeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCC--CCCCeeeeecch
Confidence 6432110 11124699999999998754 578999999999
Q ss_pred HHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCC--CCcHHHHHHHHHHhccCCCCCCC---HHHHHHHHHH
Q 001103 1074 IAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPE--RCDPEWRKLMEECWSFNPAARPS---FTEITNRLRV 1142 (1157)
Q Consensus 1074 VILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~--~iSpeLrdLIkrCLqkDPskRPS---aeELLe~Lr~ 1142 (1157)
|++|+|++|..||...........+........++. .+++++++||.+||. +|.+|++ +++++++.+.
T Consensus 227 ~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~ 299 (364)
T cd05599 227 VIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFF 299 (364)
T ss_pred hHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCc
Confidence 999999999999998887776666654333333333 468999999999997 9999987 9999998765
No 32
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.2e-39 Score=348.00 Aligned_cols=256 Identities=26% Similarity=0.360 Sum_probs=202.6
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++++.||+|+||+||+|+. +++.||||+++...... ....+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~-- 74 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG-------TPFTAIREASLLKGLKHANIVLLHDIIHT-- 74 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc-------cchhHHHHHHHHhhCCCCCcCeEEEEEec--
Confidence 46899999999999999999998 47789999987542111 12356789999999999999999999987
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
....++||||+. ++|.+++.+....+++..++.++.|++.||+|||++||+||||||+|||++ .++.+||+|||+
T Consensus 75 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~----~~~~~kl~Dfg~ 149 (303)
T cd07869 75 KETLTLVFEYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS----DTGELKLADFGL 149 (303)
T ss_pred CCeEEEEEECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC----CCCCEEECCCCc
Confidence 568999999996 577777766656688999999999999999999999999999999999998 677899999999
Q ss_pred cccccC-CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-HHHHHhhhc---C----
Q 001103 1032 SRIKCN-TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-AIIGGILSN---T---- 1102 (1157)
Q Consensus 1032 Akl~~~-~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-eil~~Il~~---~---- 1102 (1157)
+..... ........||+.|+|||++.+. ..++.++|||||||++|+|++|+.||.+.... ..+..+... .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (303)
T cd07869 150 ARAKSVPSHTYSNEVVTLWYRPPDVLLGS-TEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDT 228 (303)
T ss_pred ceeccCCCccCCCCcccCCCCChHHHcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhh
Confidence 875332 2223345689999999998754 35788999999999999999999999875432 222222110 0
Q ss_pred ---------CCC-----CCC---------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1103 ---------LRP-----QIP---------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1103 ---------lrp-----eip---------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+.+ ..+ ...++.+++||.+||++||++|||+.+++++.+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~ 293 (303)
T cd07869 229 WPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSD 293 (303)
T ss_pred ccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCccccc
Confidence 000 000 123567899999999999999999999999887643
No 33
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=5.7e-40 Score=345.02 Aligned_cols=252 Identities=23% Similarity=0.288 Sum_probs=202.1
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||+||+++++ +..||||+++..... ......+.+|+++++.++||||+++++++.. .
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~ 72 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN------EEVKETTLRELKMLRTLKQENIVELKEAFRR--R 72 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc------ccchhhHHHHHHHHHhCCCccccchhhhEec--C
Confidence 36899999999999999999985 567999998764211 1224567889999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+.+++||||+.++.+..+. +....+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 73 ~~~~lv~e~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~----~~~~~kl~Dfg~~ 147 (287)
T cd07848 73 GKLYLVFEYVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS----HNDVLKLCDFGFA 147 (287)
T ss_pred CEEEEEEecCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc----CCCcEEEeeccCc
Confidence 6899999999987775544 3344588999999999999999999999999999999999998 6779999999999
Q ss_pred ccccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc--C------
Q 001103 1033 RIKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN--T------ 1102 (1157)
Q Consensus 1033 kl~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~--~------ 1102 (1157)
....... ......||+.|+|||++.+. .++.++|||||||++|+|++|++||...........+... .
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 225 (287)
T cd07848 148 RNLSEGSNANYTEYVATRWYRSPELLLGA--PYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQM 225 (287)
T ss_pred ccccccccccccccccccccCCcHHHcCC--CCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHH
Confidence 7643321 22345799999999999754 4788999999999999999999999876654433222110 0
Q ss_pred -----------CC-C----------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 -----------LR-P----------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 -----------lr-p----------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.. + .....++.++++||++||++||++|||+++++++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~ 286 (287)
T cd07848 226 KLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPA 286 (287)
T ss_pred HhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 00 0 011236788999999999999999999999998764
No 34
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-40 Score=379.24 Aligned_cols=260 Identities=24% Similarity=0.367 Sum_probs=220.3
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
......|+.+++||+|.||.||+|++ +|..||+|+++..... +.......||+.||++|+||||++|.++..
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~------~~~~~t~~REI~ILr~l~HpNIikL~eivt 186 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK------EGFPITAIREIKILRRLDHPNIIKLEEIVT 186 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC------CcchHHHHHHHHHHHhcCCCcccceeeEEE
Confidence 34456789999999999999999998 5777999999875322 222456789999999999999999999998
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
....+.+|||+|||+. +|.-++...+-.|++.++..++.||+.||+|||++||+|||||..||||+ .++.+||+|
T Consensus 187 ~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLid----n~G~LKiaD 261 (560)
T KOG0600|consen 187 SKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILID----NNGVLKIAD 261 (560)
T ss_pred ecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEc----CCCCEEecc
Confidence 8656789999999987 99999988777799999999999999999999999999999999999999 889999999
Q ss_pred cCCcccccCC--cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC----
Q 001103 1029 FGLSRIKCNT--LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT---- 1102 (1157)
Q Consensus 1029 FGLAkl~~~~--~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~---- 1102 (1157)
||||++.... ...+..+-|.+|.|||++.|. ..|+..+|+||+||||.||+.|++.|++....+.+..|...-
T Consensus 262 FGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~-t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~ 340 (560)
T KOG0600|consen 262 FGLARFYTPSGSAPYTSRVVTLWYRPPELLLGA-TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPT 340 (560)
T ss_pred ccceeeccCCCCcccccceEEeeccChHHhcCC-cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCC
Confidence 9999964433 345667899999999999987 479999999999999999999999999999888777775310
Q ss_pred ---CC-CCCC-------------------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1103 ---LR-PQIP-------------------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1103 ---lr-peip-------------------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
++ ..+| ..+++...+|+..||..||.+|.|+.+.|+.-++
T Consensus 341 e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~seyF 403 (560)
T KOG0600|consen 341 EDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQSEYF 403 (560)
T ss_pred hhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcCccc
Confidence 00 0111 2257778899999999999999999999986544
No 35
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3e-39 Score=351.37 Aligned_cols=258 Identities=27% Similarity=0.440 Sum_probs=210.0
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+...+|++++.||+|+||.||++++. +..+|+|++.... .......+.+|++++++++||||+++++++..
T Consensus 2 l~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 74 (331)
T cd06649 2 LKDDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-------KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 74 (331)
T ss_pred CCcccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence 34579999999999999999999985 6679999887531 12235678999999999999999999999887
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeeccCCCCCCeEEEEe
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMK-NIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSk-GIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
.+.+++||||+++++|.+++.... .+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|
T Consensus 75 --~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~----~~~~~kl~D 147 (331)
T cd06649 75 --DGEISICMEHMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN----SRGEIKLCD 147 (331)
T ss_pred --CCEEEEEeecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc----CCCcEEEcc
Confidence 568999999999999999987543 488999999999999999999986 699999999999998 677899999
Q ss_pred cCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhh---------
Q 001103 1029 FGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGIL--------- 1099 (1157)
Q Consensus 1029 FGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il--------- 1099 (1157)
||++...... ......||+.|+|||++.+. .++.++|||||||++|+|++|+.||......+....+.
T Consensus 148 fg~~~~~~~~-~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 224 (331)
T cd06649 148 FGVSGQLIDS-MANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEG 224 (331)
T ss_pred Cccccccccc-ccccCCCCcCcCCHhHhcCC--CCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccC
Confidence 9998754332 23345799999999999864 57899999999999999999999997655433221110
Q ss_pred ------------------------------------hcCCCCCC-CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1100 ------------------------------------SNTLRPQI-PERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1100 ------------------------------------~~~lrpei-p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
....++.. ...+++++++||.+||++||++|||+++|+++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~ 304 (331)
T cd06649 225 EPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFI 304 (331)
T ss_pred CccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHH
Confidence 00011111 22467899999999999999999999999999887
Q ss_pred HHHH
Q 001103 1143 MSTA 1146 (1157)
Q Consensus 1143 Lk~a 1146 (1157)
....
T Consensus 305 ~~~~ 308 (331)
T cd06649 305 KRSE 308 (331)
T ss_pred hhcc
Confidence 6543
No 36
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.6e-39 Score=349.21 Aligned_cols=257 Identities=23% Similarity=0.324 Sum_probs=202.0
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC--
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP-- 951 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~-- 951 (1157)
+|++.+.||+|+||.||+|++ .+..||||++...... ......+.+|+++++.++||||+++++++....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH------VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc------chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCC
Confidence 588999999999999999987 4678999998753111 111346789999999999999999999875432
Q ss_pred -CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 952 -GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 952 -~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
...+|+|||||. ++|.+++.+.. .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 75 ~~~~~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~----~~~~~kL~Dfg 148 (338)
T cd07859 75 EFKDIYVVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILAN----ADCKLKICDFG 148 (338)
T ss_pred CCceEEEEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC----CCCcEEEccCc
Confidence 235899999995 58888886544 488999999999999999999999999999999999998 77899999999
Q ss_pred CcccccCC----cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh------
Q 001103 1031 LSRIKCNT----LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS------ 1100 (1157)
Q Consensus 1031 LAkl~~~~----~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~------ 1100 (1157)
+++..... .......||+.|+|||++.+....++.++|||||||++|+|++|++||.+......+..+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 228 (338)
T cd07859 149 LARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPS 228 (338)
T ss_pred cccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCC
Confidence 98753221 12234579999999999875435678999999999999999999999987654332211110
Q ss_pred --------------------cCCCCC---CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1101 --------------------NTLRPQ---IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1101 --------------------~~lrpe---ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
...... ....+++.+.+||.+||+.||++|||+++++++.+...
T Consensus 229 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~ 295 (338)
T cd07859 229 PETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKG 295 (338)
T ss_pred HHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhh
Confidence 000000 01236788999999999999999999999999987643
No 37
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=5.8e-40 Score=361.28 Aligned_cols=253 Identities=25% Similarity=0.421 Sum_probs=215.0
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECC---ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRG---TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kG---t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
+...+|++++.||+|+||.||+|++++ ..||+|++.+.... .......+.+|+.+++.++||||+++++++.
T Consensus 27 ~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~ 101 (340)
T PTZ00426 27 MKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII-----KQKQVDHVFSERKILNYINHPFCVNLYGSFK 101 (340)
T ss_pred CChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh-----hhhhHHHHHHHHHHHHhCCCCCCcceEEEEE
Confidence 455789999999999999999998742 46999998764221 1223456789999999999999999999998
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
+ .+.+|+||||+.+|+|.+++.+.. .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|
T Consensus 102 ~--~~~~~lv~Ey~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~----~~~~ikL~D 174 (340)
T PTZ00426 102 D--ESYLYLVLEFVIGGEFFTFLRRNK-RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD----KDGFIKMTD 174 (340)
T ss_pred e--CCEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC----CCCCEEEec
Confidence 7 568999999999999999987544 588999999999999999999999999999999999998 678999999
Q ss_pred cCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC
Q 001103 1029 FGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP 1108 (1157)
Q Consensus 1029 FGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip 1108 (1157)
||++...... ....+||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+..... .++
T Consensus 175 FG~a~~~~~~--~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~--~~p 248 (340)
T PTZ00426 175 FGFAKVVDTR--TYTLCGTPEYIAPEILLNV--GHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGII--YFP 248 (340)
T ss_pred CCCCeecCCC--cceecCChhhcCHHHHhCC--CCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCC--CCC
Confidence 9999765332 2346799999999999754 568899999999999999999999998877766677665433 456
Q ss_pred CCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARP-----SFTEITNRLRV 1142 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRP-----SaeELLe~Lr~ 1142 (1157)
..+++.++++|++||+.||.+|+ ++++++++.+.
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f 287 (340)
T PTZ00426 249 KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWF 287 (340)
T ss_pred CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCc
Confidence 77899999999999999999995 89999998764
No 38
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3e-39 Score=338.13 Aligned_cols=256 Identities=30% Similarity=0.557 Sum_probs=213.0
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC-----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR-----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGV 946 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k-----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygv 946 (1157)
+...+|++.+.||+|+||.||+|.++ +..||+|.++.... ......+.+|+.++++++||||++++++
T Consensus 2 i~~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 74 (266)
T cd05064 2 LDNKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS-------DKQRRGFLAEALTLGQFDHSNIVRLEGV 74 (266)
T ss_pred CchHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC-------HHHHHHHHHHHHHHhcCCCCCcCeEEEE
Confidence 34568999999999999999999763 45699998875421 1223568899999999999999999999
Q ss_pred eecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 947 VPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 947 f~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
+.. ....++||||+++|+|.+++.+....+++..++.++.|++.||+|||++|++||||||+|||++ .++.+||
T Consensus 75 ~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~----~~~~~~l 148 (266)
T cd05064 75 ITR--GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN----SDLVCKI 148 (266)
T ss_pred Eec--CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc----CCCcEEE
Confidence 877 5689999999999999999977656789999999999999999999999999999999999998 6779999
Q ss_pred EecCCcccccCCccc--CCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCC
Q 001103 1027 GDFGLSRIKCNTLVS--GGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTL 1103 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~s--ts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~l 1103 (1157)
+|||.+......... ....++..|+|||.+.+. .++.++|||||||++|||++ |+.||........+..+... .
T Consensus 149 ~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~ 225 (266)
T cd05064 149 SGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYH--HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDG-F 225 (266)
T ss_pred CCCcccccccccchhcccCCCCceeecCHHHHhhC--CccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC-C
Confidence 999987653222211 123356789999998754 57899999999999999775 99999988777766665443 4
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1104 RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1104 rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
....+..++..+.+++.+||+.+|.+||++++|++.|..+
T Consensus 226 ~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 4456778899999999999999999999999999988654
No 39
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=6.4e-40 Score=353.23 Aligned_cols=245 Identities=24% Similarity=0.386 Sum_probs=206.8
Q ss_pred ecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEE
Q 001103 883 LGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTE 960 (1157)
Q Consensus 883 LGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVME 960 (1157)
||+|+||.||++++. +..||+|++++.... .......+.+|+.++++++||||+++++++.. ...+|+|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~lv~e 73 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIV-----SRSEVTHTLAERTVLAQVNCPFIVPLKFSFQS--PEKLYLVLA 73 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHhCCCCcEeceeeEEec--CCeEEEEEc
Confidence 799999999999984 667999998764221 12234667889999999999999999999877 568999999
Q ss_pred eecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC-Cc
Q 001103 961 YMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN-TL 1039 (1157)
Q Consensus 961 YmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~-~~ 1039 (1157)
|+++|+|.+++.+.+ .+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++.... ..
T Consensus 74 ~~~~g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~----~~~~~kl~Dfg~~~~~~~~~~ 148 (312)
T cd05585 74 FINGGELFHHLQREG-RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD----YQGHIALCDFGLCKLNMKDDD 148 (312)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC----CCCcEEEEECcccccCccCCC
Confidence 999999999987644 588999999999999999999999999999999999998 677999999999875322 22
Q ss_pred ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHH
Q 001103 1040 VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLM 1119 (1157)
Q Consensus 1040 ~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLI 1119 (1157)
.....+||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+.... ..++..+++++++||
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li 224 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGH--GYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEP--LRFPDGFDRDAKDLL 224 (312)
T ss_pred ccccccCCcccCCHHHHcCC--CCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCC--CCCCCcCCHHHHHHH
Confidence 33456799999999999854 57899999999999999999999999887777777666443 356778999999999
Q ss_pred HHHhccCCCCCC---CHHHHHHHHHHH
Q 001103 1120 EECWSFNPAARP---SFTEITNRLRVM 1143 (1157)
Q Consensus 1120 krCLqkDPskRP---SaeELLe~Lr~L 1143 (1157)
.+||+.||.+|| ++.+++++.+.-
T Consensus 225 ~~~L~~dp~~R~~~~~~~e~l~hp~~~ 251 (312)
T cd05585 225 IGLLSRDPTRRLGYNGAQEIKNHPFFS 251 (312)
T ss_pred HHHcCCCHHHcCCCCCHHHHHcCCCcC
Confidence 999999999997 578888886643
No 40
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.4e-39 Score=361.34 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=206.1
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|++++.||+|+||+||+|++ .+..||||++.+..... ......+.+|+++++.++||||+++++++.+ ..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~-----~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--~~ 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLN-----RNQVAHVKAERDILAEADNEWVVKLYYSFQD--KD 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----hHHHHHHHHHHHHHHhcCCCCeeeeEEEEec--CC
Confidence 689999999999999999988 46679999998643221 2234678899999999999999999999987 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.+|+||||+++|+|.+++.+.. .+++..+..++.||+.||+|||++||+||||||+|||++ ..+++||+|||++.
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~----~~~~~kL~DFGl~~ 149 (381)
T cd05626 75 NLYFVMDYIPGGDMMSLLIRME-VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID----LDGHIKLTDFGLCT 149 (381)
T ss_pred EEEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC----CCCCEEEeeCcCCc
Confidence 8999999999999999987644 488899999999999999999999999999999999998 67799999999975
Q ss_pred cccC------------------------------------------------CcccCCCCCCCcccCcccccCCCCCCCc
Q 001103 1034 IKCN------------------------------------------------TLVSGGVRGTLPWMAPELLNGSNNRVSE 1065 (1157)
Q Consensus 1034 l~~~------------------------------------------------~~~sts~~GTp~YmAPEVL~G~~~~yS~ 1065 (1157)
.... .......+||+.|+|||++.+. .++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~ 227 (381)
T cd05626 150 GFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRK--GYTQ 227 (381)
T ss_pred ccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCC--CCCC
Confidence 3210 0011235799999999999754 5789
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC--CCCcHHHHHHHHHHhc--cCCCCCCCHHHHHHHHH
Q 001103 1066 KVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP--ERCDPEWRKLMEECWS--FNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1066 KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip--~~iSpeLrdLIkrCLq--kDPskRPSaeELLe~Lr 1141 (1157)
++|||||||+||||++|+.||...........+........++ ..+++++++||.+|+. .++..||++++++++.+
T Consensus 228 ~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~ 307 (381)
T cd05626 228 LCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPF 307 (381)
T ss_pred ccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcc
Confidence 9999999999999999999998877666555554322222233 3578999999999664 45556999999999876
Q ss_pred H
Q 001103 1142 V 1142 (1157)
Q Consensus 1142 ~ 1142 (1157)
.
T Consensus 308 f 308 (381)
T cd05626 308 F 308 (381)
T ss_pred c
Confidence 5
No 41
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-40 Score=380.50 Aligned_cols=250 Identities=28% Similarity=0.480 Sum_probs=218.7
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..|....+||+|+.|.||.++. ++..||||++....... .+-+.+|+.+|+.++|+|||++++.|.. .
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~--------keLilnEi~Vm~~~~H~NiVnfl~Sylv--~ 342 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK--------KELLLNEILVMRDLHHPNIVNFLDSYLV--G 342 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc--------hhhhHHHHHHHHhccchHHHHHHHHhcc--c
Confidence 4578889999999999999987 46679999998763221 3567899999999999999999999877 4
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|.|||||+||+|.+++.... +++.++..|+++++.||+|||.+||||||||.+|||++ .++.+||+|||+|
T Consensus 343 deLWVVMEym~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~----~~g~vKltDFGFc 416 (550)
T KOG0578|consen 343 DELWVVMEYMEGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT----MDGSVKLTDFGFC 416 (550)
T ss_pred ceeEEEEeecCCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec----cCCcEEEeeeeee
Confidence 67999999999999999997544 89999999999999999999999999999999999999 7778999999999
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc-CCCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN-TLRPQIPER 1110 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~-~lrpeip~~ 1110 (1157)
....... ...+.+|||.|||||++.. ..|+.++||||||++++||+.|++||-..+....+..|..+ ......+..
T Consensus 417 aqi~~~~~KR~TmVGTPYWMAPEVvtr--k~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~k 494 (550)
T KOG0578|consen 417 AQISEEQSKRSTMVGTPYWMAPEVVTR--KPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEK 494 (550)
T ss_pred eccccccCccccccCCCCccchhhhhh--cccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccc
Confidence 8755443 4556789999999999984 46899999999999999999999999988877777777655 445567888
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+|++|++|+.+||..|+.+|+++.+||+|...
T Consensus 495 lS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl 526 (550)
T KOG0578|consen 495 LSPELKDFLDRCLVVDVEQRASAKELLEHPFL 526 (550)
T ss_pred cCHHHHHHHHHHhhcchhcCCCHHHHhcChhh
Confidence 99999999999999999999999999998654
No 42
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=8.4e-40 Score=361.54 Aligned_cols=253 Identities=22% Similarity=0.330 Sum_probs=207.3
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||+||++++ .++.||||++.+.... .......+.+|+++++.++||||+++++++.+ .
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~ 73 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMF-----KKDQLAHVKAERDVLAESDSPWVVSLYYSFQD--A 73 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHH-----HhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc--C
Confidence 3789999999999999999988 4678999998764211 12234678889999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|+||||+++|+|.+++... +.+++..++.++.|++.||+|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~----~~~~~kl~DfGla 148 (377)
T cd05629 74 QYLYLIMEFLPGGDLMTMLIKY-DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID----RGGHIKLSDFGLS 148 (377)
T ss_pred CeeEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC----CCCCEEEeecccc
Confidence 6899999999999999998754 4588999999999999999999999999999999999998 6789999999998
Q ss_pred ccccCCc------------------------------------------------ccCCCCCCCcccCcccccCCCCCCC
Q 001103 1033 RIKCNTL------------------------------------------------VSGGVRGTLPWMAPELLNGSNNRVS 1064 (1157)
Q Consensus 1033 kl~~~~~------------------------------------------------~sts~~GTp~YmAPEVL~G~~~~yS 1064 (1157)
+...... .....+||+.|+|||++.+. .++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~ 226 (377)
T cd05629 149 TGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ--GYG 226 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC--CCC
Confidence 5211100 00124699999999999754 578
Q ss_pred chhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCC--CCcHHHHHHHHHHhccCCCCC---CCHHHHHHH
Q 001103 1065 EKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPE--RCDPEWRKLMEECWSFNPAAR---PSFTEITNR 1139 (1157)
Q Consensus 1065 ~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~--~iSpeLrdLIkrCLqkDPskR---PSaeELLe~ 1139 (1157)
.++|||||||+||||++|++||........+..+........++. .+++++++||.+||. +|.+| +++.+++++
T Consensus 227 ~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 227 QECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred CceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999999999999999999988777666666654332333333 478999999999998 66665 699999998
Q ss_pred HHH
Q 001103 1140 LRV 1142 (1157)
Q Consensus 1140 Lr~ 1142 (1157)
.+.
T Consensus 306 p~~ 308 (377)
T cd05629 306 PFF 308 (377)
T ss_pred CCc
Confidence 765
No 43
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1e-39 Score=354.51 Aligned_cols=247 Identities=25% Similarity=0.410 Sum_probs=207.8
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATV 958 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLV 958 (1157)
+.||+|+||.||+++. .|..||+|++++..... ......+.+|+++++.++||||+++++.+.. ...+|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~--~~~~~lv 73 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIA-----KDEVAHTVTESRVLQNTRHPFLTALKYAFQT--HDRLCFV 73 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----hHHHHHHHHHHHHHHhCCCCCCcceeeEEec--CCEEEEE
Confidence 3699999999999987 46789999998653211 2224567789999999999999999999987 5689999
Q ss_pred EEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC-
Q 001103 959 TEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN- 1037 (1157)
Q Consensus 959 MEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~- 1037 (1157)
|||+++++|..++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 74 ~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~----~~~~~kL~Dfg~~~~~~~~ 148 (323)
T cd05595 74 MEYANGGELFFHLSRE-RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD----KDGHIKITDFGLCKEGISD 148 (323)
T ss_pred EeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc----CCCCEEecccHHhccccCC
Confidence 9999999998888654 3588999999999999999999999999999999999998 677999999999875322
Q ss_pred CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHH
Q 001103 1038 TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRK 1117 (1157)
Q Consensus 1038 ~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrd 1117 (1157)
........||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+..... .++..+++++++
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~--~~p~~~~~~~~~ 224 (323)
T cd05595 149 GATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEI--RFPRTLSPEAKS 224 (323)
T ss_pred CCccccccCCcCcCCcccccCC--CCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHHH
Confidence 2223346799999999999754 578999999999999999999999988777776666654433 466788999999
Q ss_pred HHHHHhccCCCCCC-----CHHHHHHHHHHH
Q 001103 1118 LMEECWSFNPAARP-----SFTEITNRLRVM 1143 (1157)
Q Consensus 1118 LIkrCLqkDPskRP-----SaeELLe~Lr~L 1143 (1157)
||.+||+.||.+|+ ++.+++++.+..
T Consensus 225 li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~ 255 (323)
T cd05595 225 LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFL 255 (323)
T ss_pred HHHHHccCCHHHhCCCCCCCHHHHHcCCCcC
Confidence 99999999999998 899999986553
No 44
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=9.1e-40 Score=356.08 Aligned_cols=246 Identities=25% Similarity=0.388 Sum_probs=207.2
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATV 958 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLV 958 (1157)
+.||+|+||.||+++. .+..||||++.+..... ......+.+|+++++.++||||+++++.+.. ...+|+|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~~~lv 73 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIA-----KDEVAHTLTESRVLKNTRHPFLTSLKYSFQT--KDRLCFV 73 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----hhHHHHHHHHHHHHHhCCCCCCcceEEEEEc--CCEEEEE
Confidence 3699999999999987 46789999998653221 1224567889999999999999999999887 5689999
Q ss_pred EEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC-
Q 001103 959 TEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN- 1037 (1157)
Q Consensus 959 MEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~- 1037 (1157)
|||+++|+|..++... +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++....
T Consensus 74 ~Ey~~~g~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~----~~~~~kL~DfG~~~~~~~~ 148 (328)
T cd05593 74 MEYVNGGELFFHLSRE-RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD----KDGHIKITDFGLCKEGITD 148 (328)
T ss_pred EeCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC----CCCcEEEecCcCCccCCCc
Confidence 9999999998888654 4588999999999999999999999999999999999998 677999999999875322
Q ss_pred CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHH
Q 001103 1038 TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRK 1117 (1157)
Q Consensus 1038 ~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrd 1117 (1157)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+.... ..++..+++++.+
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~--~~~p~~~~~~~~~ 224 (328)
T cd05593 149 AATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMED--IKFPRTLSADAKS 224 (328)
T ss_pred ccccccccCCcCccChhhhcCC--CCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCC--ccCCCCCCHHHHH
Confidence 2233446799999999999754 57899999999999999999999998877666666554332 3567789999999
Q ss_pred HHHHHhccCCCCCC-----CHHHHHHHHHH
Q 001103 1118 LMEECWSFNPAARP-----SFTEITNRLRV 1142 (1157)
Q Consensus 1118 LIkrCLqkDPskRP-----SaeELLe~Lr~ 1142 (1157)
||.+||++||.+|+ ++.+++++.+.
T Consensus 225 li~~~L~~dP~~R~~~~~~~~~~il~h~~~ 254 (328)
T cd05593 225 LLSGLLIKDPNKRLGGGPDDAKEIMRHSFF 254 (328)
T ss_pred HHHHHcCCCHHHcCCCCCCCHHHHhcCCCc
Confidence 99999999999997 89999998654
No 45
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=1.9e-39 Score=341.50 Aligned_cols=254 Identities=27% Similarity=0.363 Sum_probs=201.4
Q ss_pred CCeeEEEEecccCcEEEEEEEEC---CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC---CCCceeEEeeeee
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR---GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL---HHPNVVAFYGVVP 948 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k---Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L---~HPNIVkLygvf~ 948 (1157)
.+|++++.||+|+||+||+|++. +..||||+++....... ....+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~------~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~ 74 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG------MPLSTIREVAVLRHLETFEHPNVVRLFDVCT 74 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC------chHHHHHHHHHHHhhcccCCCCcceEEEEEe
Confidence 37899999999999999999873 56799999876422111 113345666666655 6999999999875
Q ss_pred c---CCCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 949 N---GPGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 949 d---e~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
. .....+++||||+. ++|.+++... ...+++..++.++.|++.||.|||++||+||||||+|||++ .++.+
T Consensus 75 ~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~----~~~~~ 149 (290)
T cd07862 75 VSRTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT----SSGQI 149 (290)
T ss_pred cccCCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc----CCCCE
Confidence 3 22457899999997 5888887653 34588999999999999999999999999999999999998 67799
Q ss_pred EEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC
Q 001103 1025 KVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR 1104 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr 1104 (1157)
||+|||++.............||+.|+|||++.+. .++.++|||||||++|||++|++||.+......+..+......
T Consensus 150 kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~ 227 (290)
T cd07862 150 KLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQS--SYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 227 (290)
T ss_pred EEccccceEeccCCcccccccccccccChHHHhCC--CCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCC
Confidence 99999999765544444556799999999998754 5788999999999999999999999988776666555432100
Q ss_pred C-------------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1105 P-------------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1105 p-------------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+ .+...+++.+++||.+||+.||++|||+.+++++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~ 289 (290)
T cd07862 228 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289 (290)
T ss_pred CChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCC
Confidence 0 011346788899999999999999999999998754
No 46
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=7.3e-40 Score=361.36 Aligned_cols=253 Identities=20% Similarity=0.282 Sum_probs=207.4
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||.||+++.. ++.||||++.+.... .......+.+|+.+|+.++||||+++++.+.+ .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~--~ 73 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVL-----MRNQAAHVKAERDILAEADNEWVVKLYYSFQD--K 73 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHH-----hhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--C
Confidence 37999999999999999999884 677999998764221 11224667889999999999999999999987 6
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+.+|+||||+++|+|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++ ..+.+||+|||+|
T Consensus 74 ~~~~lv~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~----~~~~ikL~DFG~a 148 (376)
T cd05598 74 DNLYFVMDYIPGGDMMSLLIRL-GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID----RDGHIKLTDFGLC 148 (376)
T ss_pred CEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC----CCCCEEEEeCCCC
Confidence 6899999999999999999754 3588899999999999999999999999999999999998 6779999999997
Q ss_pred ccccC--------------------------------------------CcccCCCCCCCcccCcccccCCCCCCCchhH
Q 001103 1033 RIKCN--------------------------------------------TLVSGGVRGTLPWMAPELLNGSNNRVSEKVD 1068 (1157)
Q Consensus 1033 kl~~~--------------------------------------------~~~sts~~GTp~YmAPEVL~G~~~~yS~KSD 1068 (1157)
..... .......+||+.|+|||++.+. .++.++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~D 226 (376)
T cd05598 149 TGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRT--GYTQLCD 226 (376)
T ss_pred ccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCC--CCCccee
Confidence 42100 0011235799999999999754 5788999
Q ss_pred HHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC--CCCCCCcHHHHHHHHHHhccCCCCCC---CHHHHHHHHHH
Q 001103 1069 VYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP--QIPERCDPEWRKLMEECWSFNPAARP---SFTEITNRLRV 1142 (1157)
Q Consensus 1069 IWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp--eip~~iSpeLrdLIkrCLqkDPskRP---SaeELLe~Lr~ 1142 (1157)
||||||+||+|++|+.||......+....+....... .....+++++.+||.+|+ .+|.+|+ ++.+++++.+.
T Consensus 227 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~ 304 (376)
T cd05598 227 WWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFF 304 (376)
T ss_pred eeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCc
Confidence 9999999999999999999887666555554322222 223468899999999987 5999999 99999998764
No 47
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.1e-39 Score=353.13 Aligned_cols=253 Identities=23% Similarity=0.383 Sum_probs=206.4
Q ss_pred CeeEEEEecccCcEEEEEEEE-----CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec
Q 001103 876 DLEELQELGSGTFGTVYRGKW-----RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPN 949 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~-----kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~d 949 (1157)
+|++++.||+|+||+||+++. .+..||+|++.+..... .....+.+.+|+.+++.+ +||+|+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~ 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQ----KAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQT 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhh----hhhHHHHHHHHHHHHHhccCCCCcccEEEEEec
Confidence 588999999999999999876 36779999998643211 122345678899999999 59999999999877
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
.+.+++||||+.+|+|.+++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 77 --~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~----~~~~~kl~Df 149 (332)
T cd05614 77 --EAKLHLILDYVSGGEMFTHLYQR-DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD----SEGHVVLTDF 149 (332)
T ss_pred --CCEEEEEEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC----CCCCEEEeeC
Confidence 56899999999999999988654 3588999999999999999999999999999999999998 6779999999
Q ss_pred CCcccccC--CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----hHHHHHhhhcCC
Q 001103 1030 GLSRIKCN--TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC----GAIIGGILSNTL 1103 (1157)
Q Consensus 1030 GLAkl~~~--~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~----eeil~~Il~~~l 1103 (1157)
|+++.... .......+||+.|+|||++.+. ..++.++|||||||+||+|++|+.||..... ......+. ..
T Consensus 150 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~--~~ 226 (332)
T cd05614 150 GLSKEFLSEEKERTYSFCGTIEYMAPEIIRGK-GGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL--KC 226 (332)
T ss_pred cCCccccccCCCccccccCCccccCHHHhcCC-CCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh--cC
Confidence 99875322 2223346799999999999754 3467899999999999999999999974322 22222232 23
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHHHHH
Q 001103 1104 RPQIPERCDPEWRKLMEECWSFNPAARP-----SFTEITNRLRV 1142 (1157)
Q Consensus 1104 rpeip~~iSpeLrdLIkrCLqkDPskRP-----SaeELLe~Lr~ 1142 (1157)
.+.++..+++.+++||.+||+.||.+|| ++.+++++.|.
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~ 270 (332)
T cd05614 227 DPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFF 270 (332)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCc
Confidence 4456778899999999999999999999 88899998764
No 48
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2e-39 Score=351.11 Aligned_cols=249 Identities=24% Similarity=0.429 Sum_probs=206.7
Q ss_pred eeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHH---HhCCCCceeEEeeeeecCC
Q 001103 877 LEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHII---SNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkIL---K~L~HPNIVkLygvf~de~ 951 (1157)
|++++.||+|+||.||+++++ ++.||||++++..... ....+.+.+|++++ +.++||||+++++++..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~-- 73 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIA-----RDEVESLMCEKRIFETANSERHPFLVNLFACFQT-- 73 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----hhHHHHHHHHHHHHHhccccCCCChhceeeEEEc--
Confidence 678999999999999999884 6779999998653211 11234556666554 56789999999999987
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
...+|+||||+.+++|...+.. ..+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 74 ~~~~~lv~E~~~~~~L~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~----~~~~~kL~Dfg~ 147 (324)
T cd05589 74 EDHVCFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD----TEGFVKIADFGL 147 (324)
T ss_pred CCEEEEEEcCCCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC----CCCcEEeCcccC
Confidence 5689999999999999888754 3589999999999999999999999999999999999998 678999999999
Q ss_pred cccccC-CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCC
Q 001103 1032 SRIKCN-TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPER 1110 (1157)
Q Consensus 1032 Akl~~~-~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~ 1110 (1157)
++.... .......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.........+..... .++..
T Consensus 148 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~--~~p~~ 223 (324)
T cd05589 148 CKEGMGFGDRTSTFCGTPEFLAPEVLTET--SYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEV--RYPRF 223 (324)
T ss_pred CccCCCCCCcccccccCccccCHhHhcCC--CCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCC
Confidence 874322 2223446799999999999754 578899999999999999999999998887777776655433 46677
Q ss_pred CcHHHHHHHHHHhccCCCCCC-----CHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARP-----SFTEITNRLRV 1142 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRP-----SaeELLe~Lr~ 1142 (1157)
+++.+.+||.+||+.||.+|| ++.+++++.+.
T Consensus 224 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f 260 (324)
T cd05589 224 LSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFF 260 (324)
T ss_pred CCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCc
Confidence 899999999999999999999 68899887654
No 49
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=7.5e-39 Score=341.28 Aligned_cols=254 Identities=30% Similarity=0.490 Sum_probs=203.6
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC------------------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHh
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR------------------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISN 934 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k------------------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~ 934 (1157)
...+|++.++||+|+||.||++.+. +..||+|++.... .......+.+|++++++
T Consensus 3 ~~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~ 75 (304)
T cd05096 3 PRGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-------NKNARNDFLKEVKILSR 75 (304)
T ss_pred chhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-------CHHHHHHHHHHHHHHhh
Confidence 3468999999999999999999752 2359999887531 12235678899999999
Q ss_pred CCCCceeEEeeeeecCCCCcEEEEEEeecCCcchhhhcccc------------------ccccHHHHHHHHHHHHHHHHH
Q 001103 935 LHHPNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD------------------RILDRRKKLMLMMDAAFGMEY 996 (1157)
Q Consensus 935 L~HPNIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g------------------r~L~e~qVlkIa~QLa~ALeY 996 (1157)
++||||+++++++.+ ....++||||+.+++|.+++.... ..+++..++.++.||+.||.|
T Consensus 76 l~h~niv~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~ 153 (304)
T cd05096 76 LKDPNIIRLLGVCVD--EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKY 153 (304)
T ss_pred cCCCCeeEEEEEEec--CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHH
Confidence 999999999999987 457899999999999998885421 236778899999999999999
Q ss_pred HHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHH
Q 001103 997 LHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFG 1073 (1157)
Q Consensus 997 LHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLG 1073 (1157)
||++||+||||||+|||++ ..+.+||+|||++....... ......++..|+|||++.+. .++.++||||||
T Consensus 154 lH~~~ivH~dlkp~Nill~----~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG 227 (304)
T cd05096 154 LSSLNFVHRDLATRNCLVG----ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMG--KFTTASDVWAFG 227 (304)
T ss_pred HHHCCccccCcchhheEEc----CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcC--CCCchhhhHHHH
Confidence 9999999999999999998 67899999999987543221 12234467889999998754 578999999999
Q ss_pred HHHHHHHc--CCCCCCCCChhHHHHHhhh------cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1074 IAMWEIIT--GEEPYANMHCGAIIGGILS------NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1074 VILYELLT--Gk~PF~g~~~eeil~~Il~------~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
|++|+|++ +..||........+..+.. .......+..+++.+.+||.+||+.||.+|||+.+|.+.|+
T Consensus 228 ~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 228 VTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 99999986 6788987766555443321 11112234567899999999999999999999999988775
No 50
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.8e-40 Score=354.38 Aligned_cols=257 Identities=21% Similarity=0.311 Sum_probs=214.1
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||+||++++ .+..||||++++.... .......+.+|+.+++.++||||+++++++.+ .
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~--~ 73 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLL-----AQETVSFFEEERDILSISNSPWIPQLQYAFQD--K 73 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHhCCCCCCcceeeEEec--C
Confidence 3789999999999999999988 4778999999865221 12234667889999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+++||||+++++|.+++.+....+++..++.++.|++.||+|||+++|+||||||+|||++ ..+.+||+|||++
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~----~~~~~kL~Dfg~a 149 (330)
T cd05601 74 DNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID----RTGHIKLADFGSA 149 (330)
T ss_pred CeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC----CCCCEEeccCCCC
Confidence 689999999999999999987766799999999999999999999999999999999999998 7789999999999
Q ss_pred ccccCCc--ccCCCCCCCcccCcccccCC----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCC
Q 001103 1033 RIKCNTL--VSGGVRGTLPWMAPELLNGS----NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1033 kl~~~~~--~sts~~GTp~YmAPEVL~G~----~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpe 1106 (1157)
....... ......||+.|+|||++... ...++.++|||||||++|+|++|+.||........+..+........
T Consensus 150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~ 229 (330)
T cd05601 150 ARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK 229 (330)
T ss_pred eECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC
Confidence 7643322 22335699999999998632 23578899999999999999999999998877777666654432222
Q ss_pred CC--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1107 IP--ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1107 ip--~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
++ ..+++++++||..||+ +|.+||++.+++++.+..
T Consensus 230 ~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~ 267 (330)
T cd05601 230 FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFS 267 (330)
T ss_pred CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcC
Confidence 33 3578999999999998 999999999999987643
No 51
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-41 Score=382.67 Aligned_cols=258 Identities=34% Similarity=0.625 Sum_probs=228.0
Q ss_pred ccccccCCCeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 868 GLQIIKDSDLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 868 ~i~~I~~sdYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
..|+|..+.+..++-||+|+.|.||+|+.++..||||+++.- -.-+++-|++|+|||||.|.|+|
T Consensus 117 e~WeiPFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~el---------------kETdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 117 ELWEIPFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVREL---------------KETDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred hhccCCHHHhhhhhhhccCcccceeeeeccCceehhHHHhhh---------------hhhhHHHHHhccCcceeeEeeee
Confidence 455566666667788999999999999999999999976531 12467889999999999999999
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
.. ..++|||||||..|.|+++|+.. +.+.......+..+|+.|+.|||.++|||||||.-||||. .+..|||+
T Consensus 182 tq--sPcyCIiMEfCa~GqL~~VLka~-~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs----~~d~VKIs 254 (904)
T KOG4721|consen 182 TQ--SPCYCIIMEFCAQGQLYEVLKAG-RPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS----YDDVVKIS 254 (904)
T ss_pred cC--CceeEEeeeccccccHHHHHhcc-CccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee----ccceEEec
Confidence 88 45899999999999999999764 4577778888999999999999999999999999999999 55699999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCC
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpei 1107 (1157)
|||-++...+-.+...|+||..|||||+++. ...+.|+|||||||+|||||||..||...+...++..+-.+.+....
T Consensus 255 DFGTS~e~~~~STkMSFaGTVaWMAPEvIrn--ePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~Lpv 332 (904)
T KOG4721|consen 255 DFGTSKELSDKSTKMSFAGTVAWMAPEVIRN--EPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPV 332 (904)
T ss_pred cccchHhhhhhhhhhhhhhhHhhhCHHHhhc--CCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccC
Confidence 9999987666666677999999999999984 46799999999999999999999999999888888877777888889
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHhh
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQT 1149 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLes 1149 (1157)
|..++.-|+-||++||+-.|..|||+.+|+.||......+-.
T Consensus 333 PstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell~ 374 (904)
T KOG4721|consen 333 PSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELLS 374 (904)
T ss_pred cccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHhc
Confidence 999999999999999999999999999999999988776544
No 52
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.6e-39 Score=360.01 Aligned_cols=252 Identities=21% Similarity=0.302 Sum_probs=207.1
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|++++.||+|+||+||+|+. .+..||||++.+... ........+.+|+++++.++|||||++++.+.+ ..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~-----~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--~~ 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV-----LLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--KD 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh-----hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe--CC
Confidence 689999999999999999988 466799999876421 112335678899999999999999999999987 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.+|+|||||++|+|.+++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++.
T Consensus 75 ~~~lv~E~~~gg~L~~~l~~~-~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~----~~g~~kL~DFGla~ 149 (382)
T cd05625 75 NLYFVMDYIPGGDMMSLLIRM-GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID----RDGHIKLTDFGLCT 149 (382)
T ss_pred EEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC----CCCCEEEeECCCCc
Confidence 899999999999999998764 3588999999999999999999999999999999999998 67899999999974
Q ss_pred cccC------------------------------------------------CcccCCCCCCCcccCcccccCCCCCCCc
Q 001103 1034 IKCN------------------------------------------------TLVSGGVRGTLPWMAPELLNGSNNRVSE 1065 (1157)
Q Consensus 1034 l~~~------------------------------------------------~~~sts~~GTp~YmAPEVL~G~~~~yS~ 1065 (1157)
.... .......+||+.|+|||++.+. .++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~ 227 (382)
T cd05625 150 GFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRT--GYTQ 227 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCC--CCCC
Confidence 2110 0011235799999999999754 5789
Q ss_pred hhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCC--CCCCcHHHHHHHHHHhccCCCCCCC---HHHHHHHH
Q 001103 1066 KVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQI--PERCDPEWRKLMEECWSFNPAARPS---FTEITNRL 1140 (1157)
Q Consensus 1066 KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpei--p~~iSpeLrdLIkrCLqkDPskRPS---aeELLe~L 1140 (1157)
++|||||||+||||++|++||...........+........+ ...+++++.++|.+|+ .+|.+|++ +.+++++.
T Consensus 228 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp 306 (382)
T cd05625 228 LCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHP 306 (382)
T ss_pred eeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCC
Confidence 999999999999999999999988776666555543322233 3457899999999987 49999987 99999986
Q ss_pred HH
Q 001103 1141 RV 1142 (1157)
Q Consensus 1141 r~ 1142 (1157)
+.
T Consensus 307 ~f 308 (382)
T cd05625 307 FF 308 (382)
T ss_pred Cc
Confidence 65
No 53
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-40 Score=378.49 Aligned_cols=271 Identities=32% Similarity=0.586 Sum_probs=228.2
Q ss_pred ccccccCCCeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 868 GLQIIKDSDLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 868 ~i~~I~~sdYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
..|.|..+++.+...||+|.||+||+|+|.| .||||+++.... . .+..+.|.+|+..|++-+|.||+-+.|++
T Consensus 385 ~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~p---t---~~qlqaFKnEVa~lkkTRH~NIlLFMG~~ 457 (678)
T KOG0193|consen 385 EEWEIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDP---T---PEQLQAFKNEVAVLKKTRHENILLFMGAC 457 (678)
T ss_pred cccccCHHHhhccceeccccccceeeccccc-ceEEEEEecCCC---C---HHHHHHHHHHHHHHhhcchhhheeeehhh
Confidence 3567777888999999999999999999987 589999987532 1 22468899999999999999999999999
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
..++ +.||..+|+|.+|+.+++.....|++.+.+.|+.|+++|+.|||.++|||||||..|||+. +++.|||+
T Consensus 458 ~~p~---~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~----~~~kVkIg 530 (678)
T KOG0193|consen 458 MNPP---LAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLH----EDLKVKIG 530 (678)
T ss_pred cCCc---eeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEc----cCCcEEEe
Confidence 8853 4899999999999999988888899999999999999999999999999999999999998 66899999
Q ss_pred ecCCcccccCC---cccCCCCCCCcccCcccccC-CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC
Q 001103 1028 DFGLSRIKCNT---LVSGGVRGTLPWMAPELLNG-SNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL 1103 (1157)
Q Consensus 1028 DFGLAkl~~~~---~~sts~~GTp~YmAPEVL~G-~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l 1103 (1157)
|||++.....- .-.....|...|||||+++. ...+|++.+||||||+++|||++|.+||.....+.++..+-.+.+
T Consensus 531 DFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l 610 (678)
T KOG0193|consen 531 DFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYL 610 (678)
T ss_pred cccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEeccccc
Confidence 99998753211 11122458889999999864 356799999999999999999999999996666666655555544
Q ss_pred CCC---CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHhhccc
Q 001103 1104 RPQ---IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQTKRR 1152 (1157)
Q Consensus 1104 rpe---ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLesksR 1152 (1157)
.+. ....+++++++|+..||++++++||.+.+|+..|+.+...+.+..|
T Consensus 611 ~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~pki~R 662 (678)
T KOG0193|consen 611 MPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSLPKINR 662 (678)
T ss_pred CccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhccccccc
Confidence 443 3456788999999999999999999999999999988876655555
No 54
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=2.2e-39 Score=360.07 Aligned_cols=259 Identities=19% Similarity=0.307 Sum_probs=216.0
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
.+...+|++++.||+|+||.||+++++ +..||+|++.+..... ......+.+|+.+++.++||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~il~~~~h~~iv~~~~~~~ 113 (370)
T cd05596 39 RMKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIK-----RSDSAFFWEERDIMAHANSEWIVQLHYAFQ 113 (370)
T ss_pred CCCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----hhhHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 355678999999999999999999884 6779999997642211 112345778999999999999999999988
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
+ ...+|+||||+++|+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|
T Consensus 114 ~--~~~~~lv~Ey~~gg~L~~~l~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~----~~~~~kL~D 185 (370)
T cd05596 114 D--DKYLYMVMEYMPGGDLVNLMSNY--DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD----KSGHLKLAD 185 (370)
T ss_pred c--CCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc----CCCCEEEEe
Confidence 7 56899999999999999988643 478888999999999999999999999999999999998 778999999
Q ss_pred cCCcccccCCc--ccCCCCCCCcccCcccccCCC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC
Q 001103 1029 FGLSRIKCNTL--VSGGVRGTLPWMAPELLNGSN--NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR 1104 (1157)
Q Consensus 1029 FGLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~--~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr 1104 (1157)
||++....... .....+||+.|+|||++.+.. ..++.++|||||||+||||++|+.||........+..+......
T Consensus 186 fG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~ 265 (370)
T cd05596 186 FGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNS 265 (370)
T ss_pred ccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCc
Confidence 99987644322 233467999999999986532 34788999999999999999999999988877777777654433
Q ss_pred CCCCC--CCcHHHHHHHHHHhccCCCC--CCCHHHHHHHHHH
Q 001103 1105 PQIPE--RCDPEWRKLMEECWSFNPAA--RPSFTEITNRLRV 1142 (1157)
Q Consensus 1105 peip~--~iSpeLrdLIkrCLqkDPsk--RPSaeELLe~Lr~ 1142 (1157)
..++. .++.++++||.+||+.+|.+ |+++++++++.+.
T Consensus 266 ~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~ 307 (370)
T cd05596 266 LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFF 307 (370)
T ss_pred CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCccc
Confidence 34444 57999999999999999998 9999999998764
No 55
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.3e-39 Score=349.46 Aligned_cols=251 Identities=22% Similarity=0.355 Sum_probs=208.9
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCC-ceeEEeeeeecCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHP-NVVAFYGVVPNGPG 952 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HP-NIVkLygvf~de~~ 952 (1157)
+|++++.||+|+||.||+|+++ ++.||||++++..... ......+..|.+++..+.|+ +|+++++++.. .
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~ 73 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQ-----DDDVECTMVEKRVLALPGKPPFLTQLHSCFQT--M 73 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhh-----hhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc--C
Confidence 5889999999999999999985 4579999998653211 12245677899999999765 58889888877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+.+|+||||+++|+|..++.... .+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~----~~~~~kL~Dfg~~ 148 (324)
T cd05587 74 DRLYFVMEYVNGGDLMYHIQQVG-KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD----AEGHIKIADFGMC 148 (324)
T ss_pred CEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc----CCCCEEEeecCcc
Confidence 68999999999999998886544 478899999999999999999999999999999999998 6778999999998
Q ss_pred cccc-CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKC-NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~-~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
.... ........+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+......+..+.... ..++..+
T Consensus 149 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~--~~~~~~~ 224 (324)
T cd05587 149 KENIFGGKTTRTFCGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHN--VSYPKSL 224 (324)
T ss_pred eecCCCCCceeeecCCccccChhhhcCC--CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC--CCCCCCC
Confidence 7432 22233346799999999999864 57889999999999999999999999888777777776443 3567788
Q ss_pred cHHHHHHHHHHhccCCCCCCCH-----HHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSF-----TEITNRLRV 1142 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSa-----eELLe~Lr~ 1142 (1157)
++++.+||.+||.+||.+|++. .+++++.+.
T Consensus 225 ~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~ 260 (324)
T cd05587 225 SKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFF 260 (324)
T ss_pred CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCc
Confidence 9999999999999999999976 788877543
No 56
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2e-39 Score=351.50 Aligned_cols=247 Identities=27% Similarity=0.442 Sum_probs=207.3
Q ss_pred EEecccCcEEEEEEEE-----CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcE
Q 001103 881 QELGSGTFGTVYRGKW-----RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~-----kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~L 955 (1157)
+.||+|+||.||+++. .++.||||++++..... .......+.+|+.+++.++||||+++++++.. .+.+
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~----~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~--~~~~ 75 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVR----NQKDTAHTKAERNILEAVKHPFIVDLIYAFQT--GGKL 75 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHh----hhhhHHHHHHHHHHHHhCCCCchhceeeEEec--CCeE
Confidence 6799999999999976 36679999998642211 11223567789999999999999999999987 5689
Q ss_pred EEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccc
Q 001103 956 ATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~ 1035 (1157)
|+||||+.+++|.+++.+.+ .+.+..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++..
T Consensus 76 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~----~~~~~kl~Dfg~~~~~ 150 (323)
T cd05584 76 YLILEYLSGGELFMHLEREG-IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD----AQGHVKLTDFGLCKES 150 (323)
T ss_pred EEEEeCCCCchHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC----CCCCEEEeeCcCCeec
Confidence 99999999999999886544 477888889999999999999999999999999999998 6789999999998743
Q ss_pred c-CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHH
Q 001103 1036 C-NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPE 1114 (1157)
Q Consensus 1036 ~-~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpe 1114 (1157)
. .........||+.|+|||++.+. .++.++|||||||+||||++|+.||........+..+.... ..++..++++
T Consensus 151 ~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~ 226 (323)
T cd05584 151 IHEGTVTHTFCGTIEYMAPEILMRS--GHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGK--LNLPPYLTPE 226 (323)
T ss_pred ccCCCcccccCCCccccChhhccCC--CCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHH
Confidence 2 22233446799999999999754 46889999999999999999999999888777777666543 3567788999
Q ss_pred HHHHHHHHhccCCCCCC-----CHHHHHHHHHH
Q 001103 1115 WRKLMEECWSFNPAARP-----SFTEITNRLRV 1142 (1157)
Q Consensus 1115 LrdLIkrCLqkDPskRP-----SaeELLe~Lr~ 1142 (1157)
+++||.+||++||.+|| ++.+++++.+.
T Consensus 227 ~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~ 259 (323)
T cd05584 227 ARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFF 259 (323)
T ss_pred HHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCc
Confidence 99999999999999999 89999998764
No 57
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=3.1e-39 Score=342.52 Aligned_cols=256 Identities=20% Similarity=0.285 Sum_probs=210.4
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|++.+.||+|+||+||++.+ +++.||||++...... .......+.+|+.+++.++||||+++++.+.+ ..
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~ 73 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK-----KRKGEAMALNEKQILEKVNSRFVVSLAYAYET--KD 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh-----hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecC--CC
Confidence 488999999999999999987 4778999998764221 11223557789999999999999999999877 45
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
.+++||||+.+++|..++... ...+++..+..++.|++.||.|||+++|+||||||+|||++ +.+.++|+|||++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~----~~~~~~l~Dfg~~ 149 (285)
T cd05605 74 ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD----DYGHIRISDLGLA 149 (285)
T ss_pred eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC----CCCCEEEeeCCCc
Confidence 899999999999999887553 34589999999999999999999999999999999999998 6789999999999
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh--cCCCCCCCCC
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS--NTLRPQIPER 1110 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~--~~lrpeip~~ 1110 (1157)
.............|++.|+|||++.+. .++.++|||||||++|+|++|+.||.+.........+.. ......++..
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (285)
T cd05605 150 VEIPEGETIRGRVGTVGYMAPEVVKNE--RYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEK 227 (285)
T ss_pred eecCCCCccccccCCCCccCcHHhcCC--CCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcc
Confidence 765444333456799999999999754 578899999999999999999999987654332222211 1223345667
Q ss_pred CcHHHHHHHHHHhccCCCCCC-----CHHHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARP-----SFTEITNRLRVMS 1144 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRP-----SaeELLe~Lr~Lk 1144 (1157)
+++.+++||.+||..||.+|| ++++++++.+...
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05605 228 FSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRT 266 (285)
T ss_pred cCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccC
Confidence 899999999999999999999 9999999876653
No 58
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.9e-39 Score=336.60 Aligned_cols=253 Identities=37% Similarity=0.625 Sum_probs=211.1
Q ss_pred CCCeeEEEEecccCcEEEEEEEECC-------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeee
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWRG-------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGV 946 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~kG-------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygv 946 (1157)
..+|++++.||+|+||.||+|.+.+ ..||+|.++... .......+.+|+++++.++||||++++++
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~-------~~~~~~~~~~ei~~l~~l~h~~i~~~~~~ 76 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA-------EPKVQQEFRQEAELMSDLQHPNIVCLLGV 76 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC-------CHHHHHHHHHHHHHHHhcCCcccceEEEE
Confidence 4578999999999999999998743 348999876431 12234678899999999999999999999
Q ss_pred eecCCCCcEEEEEEeecCCcchhhhcccc---------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccc
Q 001103 947 VPNGPGGTMATVTEYMVNGSLRHVLARKD---------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDN 1011 (1157)
Q Consensus 947 f~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPEN 1011 (1157)
+.. ....+++|||+++++|.+++.... ..+++..++.++.|++.||.|||+++|+||||||+|
T Consensus 77 ~~~--~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~N 154 (283)
T cd05048 77 CTK--EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARN 154 (283)
T ss_pred EcC--CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccce
Confidence 876 567899999999999999886531 457888999999999999999999999999999999
Q ss_pred eeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCC
Q 001103 1012 LLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYA 1087 (1157)
Q Consensus 1012 ILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~ 1087 (1157)
||++ .++.+||+|||++....... ......+++.|+|||.+.+. .++.++|||||||++|||++ |..||.
T Consensus 155 il~~----~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~sDv~slG~il~el~~~g~~p~~ 228 (283)
T cd05048 155 CLVG----EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYG--KFTTESDIWSFGVVLWEIFSYGLQPYY 228 (283)
T ss_pred EEEc----CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccC--cCchhhhHHHHHHHHHHHHcCCCCCCC
Confidence 9998 67789999999987543221 22334578899999998743 57899999999999999998 999999
Q ss_pred CCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1088 NMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1088 g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+....+....+... ..+..+..+++++.+|+.+||+.||.+||++.+|+++|+.
T Consensus 229 ~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 229 GFSNQEVIEMIRSR-QLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred CCCHHHHHHHHHcC-CcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 88777766665543 3445677899999999999999999999999999999874
No 59
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4e-39 Score=358.92 Aligned_cols=260 Identities=30% Similarity=0.521 Sum_probs=213.4
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCcee
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVV 941 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIV 941 (1157)
+.+...+|++.+.||+|+||.||++++. +..||||+++.... ......+.+|+++++.+ +|||||
T Consensus 33 ~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~il~~l~~h~nIv 105 (374)
T cd05106 33 WEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-------TDEREALMSELKILSHLGQHKNIV 105 (374)
T ss_pred ccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-------HHHHHHHHHHHHHHHhhccCCcee
Confidence 3455678999999999999999998863 23599999875421 11246688999999999 899999
Q ss_pred EEeeeeecCCCCcEEEEEEeecCCcchhhhcccc----------------------------------------------
Q 001103 942 AFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------------------------------------- 975 (1157)
Q Consensus 942 kLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------------------------------------- 975 (1157)
++++.+.. ....++|||||.+|+|.+++.+..
T Consensus 106 ~~~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (374)
T cd05106 106 NLLGACTH--GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVE 183 (374)
T ss_pred eEeeEecC--CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccc
Confidence 99999887 568999999999999998875321
Q ss_pred -----------------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 976 -----------------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 976 -----------------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+++..+++++.||+.||.|||++||+||||||+|||++ ..+.+||+|||++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~----~~~~~kL~DfGla 259 (374)
T cd05106 184 MRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT----DGRVAKICDFGLA 259 (374)
T ss_pred cCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe----CCCeEEEeeceee
Confidence 2367888999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCC
Q 001103 1033 RIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIP 1108 (1157)
Q Consensus 1033 kl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip 1108 (1157)
+...... ......++..|+|||++.+. .++.++|||||||++|+|++ |+.||........+.........+..+
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~~~ 337 (374)
T cd05106 260 RDIMNDSNYVVKGNARLPVKWMAPESIFDC--VYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMSRP 337 (374)
T ss_pred eeccCCcceeeccCCCCccceeCHHHhcCC--CCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCccCC
Confidence 7543322 11223356789999998743 57899999999999999997 999998876655555555555566667
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
...+++++++|.+||+.||.+|||+.++++.|+.+.
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 778999999999999999999999999999998764
No 60
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=4.5e-39 Score=367.18 Aligned_cols=254 Identities=20% Similarity=0.271 Sum_probs=203.1
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
...+|++++.||+|+||+||+|.+ .+..||||++.... ....+|+.+|+.++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------------~~~~~Ei~il~~l~h~niv~l~~~~~~~ 131 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------------QYKNRELLIMKNLNHINIIFLKDYYYTE 131 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------------chHHHHHHHHHhcCCCCCcceeeeEeec
Confidence 456899999999999999999988 46789999886431 2234799999999999999998876432
Q ss_pred ------CCCcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCC
Q 001103 951 ------PGGTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQR 1021 (1157)
Q Consensus 951 ------~~~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~ 1021 (1157)
....+++||||+++ +|.+++.. ....+++..++.++.||+.||.|||+++|+||||||+|||++. ..
T Consensus 132 ~~~~~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~---~~ 207 (440)
T PTZ00036 132 CFKKNEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP---NT 207 (440)
T ss_pred ccccCCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC---CC
Confidence 12357899999986 66665542 3456899999999999999999999999999999999999972 33
Q ss_pred CeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc
Q 001103 1022 PICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN 1101 (1157)
Q Consensus 1022 g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~ 1101 (1157)
+.+||+|||+|+............||+.|+|||++.+. ..++.++|||||||+||||++|.+||.+....+.+..+...
T Consensus 208 ~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~ 286 (440)
T PTZ00036 208 HTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGA-TNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQV 286 (440)
T ss_pred CceeeeccccchhccCCCCcccCCCCcCccCHHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 47999999999865544444456789999999998754 35789999999999999999999999887655544443321
Q ss_pred C---------------------------CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1102 T---------------------------LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1102 ~---------------------------lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
. +...++...++++++||.+||++||.+|||+.+++++.+.-
T Consensus 287 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~ 355 (440)
T PTZ00036 287 LGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFD 355 (440)
T ss_pred hCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHH
Confidence 0 01123445788999999999999999999999999998864
No 61
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=4.3e-39 Score=348.43 Aligned_cols=250 Identities=21% Similarity=0.367 Sum_probs=208.8
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~~ 952 (1157)
+|++++.||+|+||.||+++++ +..||||++++..... ......+..|..++..+ +|++|+++++++.. .
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~ 73 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-----DDDVECTMVEKRVLALSGKPPFLTQLHSCFQT--M 73 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----hhHHHHHHHHHHHHHhccCCCeEeeEEEEEec--C
Confidence 5889999999999999999885 5579999998653211 12234566788888877 58999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|+||||+++|+|.+++.... .+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~E~~~~g~L~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~----~~~~~kL~DfG~~ 148 (323)
T cd05616 74 DRLYFVMEYVNGGDLMYQIQQVG-RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD----SEGHIKIADFGMC 148 (323)
T ss_pred CEEEEEEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC----CCCcEEEccCCCc
Confidence 68999999999999998886544 488999999999999999999999999999999999998 7789999999998
Q ss_pred cccc-CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKC-NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~-~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
+... ........+||+.|+|||++.+. .++.++|||||||++|||++|+.||...........+..... .++..+
T Consensus 149 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~--~~p~~~ 224 (323)
T cd05616 149 KENMWDGVTTKTFCGTPDYIAPEIIAYQ--PYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNV--AYPKSM 224 (323)
T ss_pred eecCCCCCccccCCCChhhcCHHHhcCC--CCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCCcC
Confidence 7533 22233456799999999999854 578999999999999999999999998888877777765443 466778
Q ss_pred cHHHHHHHHHHhccCCCCCCCH-----HHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSF-----TEITNRLR 1141 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSa-----eELLe~Lr 1141 (1157)
++++.+||.+||++||.+|++. .+++++.+
T Consensus 225 s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~ 259 (323)
T cd05616 225 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAF 259 (323)
T ss_pred CHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCC
Confidence 9999999999999999999974 77777643
No 62
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.9e-38 Score=327.31 Aligned_cols=255 Identities=29% Similarity=0.454 Sum_probs=214.5
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..|++.+.||+|++|.||++.. .+..||+|++...... .........+.+|++++++++||||+++++++.+ .
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~---~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 76 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDS---PETKKEVNALECEIQLLKNLQHERIVQYYGCLRD--D 76 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccc---hhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc--C
Confidence 4688899999999999999987 4788999998754221 1122234678899999999999999999999987 4
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++++|||+++++|.+++... +.+++..++.++.|++.||.|||+.||+||||||+|||++ .++.++|+|||++
T Consensus 77 ~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~----~~~~~~l~dfg~~ 151 (263)
T cd06625 77 ETLSIFMEYMPGGSVKDQLKAY-GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD----SAGNVKLGDFGAS 151 (263)
T ss_pred CeEEEEEEECCCCcHHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc----CCCCEEEeecccc
Confidence 5899999999999999988654 3478899999999999999999999999999999999998 6678999999998
Q ss_pred ccccCCcc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC
Q 001103 1033 RIKCNTLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP 1108 (1157)
Q Consensus 1033 kl~~~~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip 1108 (1157)
+....... .....|+..|+|||++.+. .++.++||||||+++|+|++|+.||...........+........++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 229 (263)
T cd06625 152 KRLQTICSSGTGMKSVTGTPYWMSPEVISGE--GYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQLP 229 (263)
T ss_pred eeccccccccccccCCCcCccccCcceeccC--CCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCCC
Confidence 75432211 1235688999999999864 47899999999999999999999998877666666665555666788
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
..++..+.+||.+||.++|.+|||+.+++++.+
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 262 (263)
T cd06625 230 SHVSPDARNFLRRTFVENAKKRPSAEELLRHFF 262 (263)
T ss_pred ccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCC
Confidence 889999999999999999999999999998765
No 63
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.5e-38 Score=329.14 Aligned_cols=249 Identities=35% Similarity=0.612 Sum_probs=208.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEECC-ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWRG-TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~kG-t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..+|++++.||+|+||.||+++++. ..+|+|.+..... ....+.+|+.+++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 71 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM---------SEEDFIEEAKVMMKLSHPKLVQLYGVCTQ--Q 71 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc---------cHHHHHHHHHHHHHCCCCCceeEEEEEcc--C
Confidence 3578999999999999999999854 4799998764311 12467889999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+++|+|.+++......+++..++.++.|++.||+|||+++|+||||||+||+++ .++.+||+|||++
T Consensus 72 ~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~----~~~~~kl~d~g~~ 147 (256)
T cd05114 72 KPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS----STGVVKVSDFGMT 147 (256)
T ss_pred CCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc----CCCeEEECCCCCc
Confidence 679999999999999999876545688999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCcc--cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1033 RIKCNTLV--SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1033 kl~~~~~~--sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
........ .....++..|+|||.+.+. .++.++|+||||+++|+|++ |+.||........+..+.... +...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~-~~~~~~ 224 (256)
T cd05114 148 RYVLDDEYTSSSGAKFPVKWSPPEVFNFS--KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGF-RLYRPK 224 (256)
T ss_pred cccCCCceeccCCCCCchhhCChhhcccC--ccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC-CCCCCC
Confidence 75432221 2223456789999998754 57889999999999999999 999999887777766665443 334566
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
..+.++.+||.+||+.+|.+||+++++++.|
T Consensus 225 ~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 225 LASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 6788999999999999999999999999876
No 64
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.5e-38 Score=329.28 Aligned_cols=254 Identities=31% Similarity=0.581 Sum_probs=211.8
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
.+...+|+++++||+|+||.||+|... +..||+|.+..... ..+.+.+|+.+++.++|+||+++++.+..
T Consensus 2 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 72 (261)
T cd05072 2 EIPRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTM---------SVQAFLEEANLMKTLQHDKLVRLYAVVTK 72 (261)
T ss_pred cCchHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCch---------hHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 355678999999999999999999874 56699998764311 13578899999999999999999999876
Q ss_pred CCCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
....+++|||+.+++|.+++.+. ...+++..++.++.|++.||+|||+++++||||||+|||++ ..+.+||+|
T Consensus 73 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~----~~~~~~l~d 146 (261)
T cd05072 73 --EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS----ESLMCKIAD 146 (261)
T ss_pred --CCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec----CCCcEEECC
Confidence 56789999999999999998653 45588889999999999999999999999999999999998 677899999
Q ss_pred cCCcccccCCcc--cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1029 FGLSRIKCNTLV--SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1029 FGLAkl~~~~~~--sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
||++........ .....++..|+|||.+.+. .++.++|||||||++|+|++ |+.||...........+... .+.
T Consensus 147 fg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~ 223 (261)
T cd05072 147 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFG--SFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRG-YRM 223 (261)
T ss_pred CccceecCCCceeccCCCccceecCCHHHhccC--CCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CCC
Confidence 999976543221 2223467789999998754 57889999999999999998 99999887766666555433 344
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.....++.++.+||.+||..+|++||+++++++.|+.
T Consensus 224 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 224 PRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 4556688999999999999999999999999999875
No 65
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.7e-39 Score=357.33 Aligned_cols=258 Identities=31% Similarity=0.510 Sum_probs=210.3
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeE
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVA 942 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVk 942 (1157)
.+...+|++.+.||+|+||.||+|++. +..||||+++.... ....+.+.+|+++++.+ +||||++
T Consensus 31 ~~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-------~~~~~~~~~Ei~il~~l~~HpnIv~ 103 (375)
T cd05104 31 EFPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-------LTEREALMSELKVLSYLGNHINIVN 103 (375)
T ss_pred ccchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-------cHHHHHHHHHHHHHHHhcCCcceee
Confidence 344568999999999999999999752 34699999875321 11235678999999999 8999999
Q ss_pred EeeeeecCCCCcEEEEEEeecCCcchhhhcccc-----------------------------------------------
Q 001103 943 FYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD----------------------------------------------- 975 (1157)
Q Consensus 943 Lygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g----------------------------------------------- 975 (1157)
+++++.. ....++|||||++|+|.+++.+..
T Consensus 104 l~~~~~~--~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 181 (375)
T cd05104 104 LLGACTV--GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPT 181 (375)
T ss_pred eeeeecc--CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccc
Confidence 9999977 567899999999999998885421
Q ss_pred ---------------------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 976 ---------------------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 976 ---------------------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
..+++..++.++.||+.||.|||+++|+||||||+|||++ ..+.+||+|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~----~~~~~kl~D 257 (375)
T cd05104 182 KADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT----HGRITKICD 257 (375)
T ss_pred ccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE----CCCcEEEec
Confidence 2467888999999999999999999999999999999998 667899999
Q ss_pred cCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCC
Q 001103 1029 FGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLR 1104 (1157)
Q Consensus 1029 FGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lr 1104 (1157)
||++........ .....++..|+|||++.+. .++.++|||||||++|||++ |..||........+...+....+
T Consensus 258 fG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~ 335 (375)
T cd05104 258 FGLARDIRNDSNYVVKGNARLPVKWMAPESIFNC--VYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYR 335 (375)
T ss_pred CccceeccCcccccccCCCCCCcceeChhHhcCC--CCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCcc
Confidence 999875433221 1123356679999999754 57899999999999999998 99999887655555555555555
Q ss_pred CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1105 PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1105 peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
...+...+.++++||.+||+.||++|||+.+|++.|+..
T Consensus 336 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 336 MLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 556667789999999999999999999999999999863
No 66
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.5e-39 Score=352.27 Aligned_cols=246 Identities=27% Similarity=0.403 Sum_probs=206.2
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATV 958 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLV 958 (1157)
+.||+|+||.||++++ .+..||+|++++..... ......+.+|+++++.++||||+++++++.. ...+|+|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~-----~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~--~~~~~lv 73 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVA-----KDEVAHTLTENRVLQNSRHPFLTALKYSFQT--HDRLCFV 73 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----hhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--CCEEEEE
Confidence 3699999999999987 46789999998653211 1224567789999999999999999999887 5689999
Q ss_pred EEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCCCCCCeEEEEecCCcccccC
Q 001103 959 TEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN 1037 (1157)
Q Consensus 959 MEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~ 1037 (1157)
|||+++|+|..++.+. +.+++..++.++.||+.||.|||+ +||+||||||+|||++ .++.+||+|||+++....
T Consensus 74 ~E~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~----~~~~~kL~Dfg~~~~~~~ 148 (325)
T cd05594 74 MEYANGGELFFHLSRE-RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD----KDGHIKITDFGLCKEGIK 148 (325)
T ss_pred EeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC----CCCCEEEecCCCCeecCC
Confidence 9999999998888654 458999999999999999999997 7999999999999998 677999999999875322
Q ss_pred -CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1038 -TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1038 -~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
........||+.|+|||++.+. .++.++|||||||+||+|++|+.||...........+.... ..++..+++++.
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~ 224 (325)
T cd05594 149 DGATMKTFCGTPEYLAPEVLEDN--DYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEE--IRFPRTLSPEAK 224 (325)
T ss_pred CCcccccccCCcccCCHHHHccC--CCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHHH
Confidence 2223346799999999999754 57899999999999999999999998877766666654433 346777899999
Q ss_pred HHHHHHhccCCCCCC-----CHHHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARP-----SFTEITNRLRV 1142 (1157)
Q Consensus 1117 dLIkrCLqkDPskRP-----SaeELLe~Lr~ 1142 (1157)
+||.+||+.||++|+ ++.+++++.+.
T Consensus 225 ~li~~~L~~dP~~R~~~~~~~~~~il~h~~~ 255 (325)
T cd05594 225 SLLSGLLKKDPKQRLGGGPDDAKEIMQHKFF 255 (325)
T ss_pred HHHHHHhhcCHHHhCCCCCCCHHHHhcCCCc
Confidence 999999999999996 99999998654
No 67
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=4.4e-39 Score=352.93 Aligned_cols=252 Identities=30% Similarity=0.481 Sum_probs=203.3
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|+++++||+|+||+||++++. ++.||||++.... .......+.+|+++++.++|+||+++++++.. .
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~ 144 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-------EDTVRRQICREIEILRDVNHPNVVKCHDMFDH--N 144 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-------cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc--C
Confidence 46778899999999999999884 7789999986531 12335678899999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+.+++||||+.+++|.... ...+..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|||++
T Consensus 145 ~~~~lv~e~~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~----~~~~~kL~DfG~~ 215 (353)
T PLN00034 145 GEIQVLLEFMDGGSLEGTH-----IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN----SAKNVKIADFGVS 215 (353)
T ss_pred CeEEEEEecCCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc----CCCCEEEcccccc
Confidence 6899999999999986543 245677888999999999999999999999999999998 6789999999999
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhH---HHHHhhhcCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGS---NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGA---IIGGILSNTLRP 1105 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~---~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~ee---il~~Il~~~lrp 1105 (1157)
....... ......||..|+|||++... ....+.++|||||||+||||++|+.||....... ....+ ......
T Consensus 216 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~-~~~~~~ 294 (353)
T PLN00034 216 RILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI-CMSQPP 294 (353)
T ss_pred eecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH-hccCCC
Confidence 7643322 22345799999999987431 1234568999999999999999999997433222 22222 223344
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
..+..+++++++||.+||+.||++|||+.+++++.+....
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~ 334 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRA 334 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccC
Confidence 5566789999999999999999999999999999887664
No 68
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-39 Score=363.14 Aligned_cols=259 Identities=25% Similarity=0.379 Sum_probs=228.3
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNG 950 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de 950 (1157)
...|++.+.||+|.||.||+++.+ |+.+|+|++.+....... ....+.+|+++|++|. |||||++++.|.+
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~-----~~~~v~~Ev~il~~l~~hpniv~l~~~~e~- 107 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKE-----DREDVRREVAILQQLSGHPNIVQLKDAFED- 107 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccc-----cHHHHHHHHHHHHhccCCCCEEEEEEEEEc-
Confidence 357888999999999999999884 777999999987544322 2467889999999998 9999999999998
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
...+++|||+|.||.|.+.+.+. .+++..+..++.|++.+++|||+.||+||||||+|+|+.......+.+|++|||
T Consensus 108 -~~~~~lvmEL~~GGeLfd~i~~~--~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 108 -PDSVYLVMELCEGGELFDRIVKK--HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred -CCeEEEEEEecCCchHHHHHHHc--cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 55899999999999999998766 399999999999999999999999999999999999998665445789999999
Q ss_pred CcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC--CCC
Q 001103 1031 LSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP--QIP 1108 (1157)
Q Consensus 1031 LAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp--eip 1108 (1157)
++............+||+.|+|||++.+. .|+..+|+||+|+++|.|++|.+||.+.........+....+.. ...
T Consensus 185 la~~~~~~~~~~~~~Gtp~y~APEvl~~~--~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w 262 (382)
T KOG0032|consen 185 LAKFIKPGERLHTIVGTPEYVAPEVLGGR--PYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPW 262 (382)
T ss_pred CceEccCCceEeeecCCccccCchhhcCC--CCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCc
Confidence 99987776677788999999999999853 68999999999999999999999999999888888887775533 345
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
..++..+++||+.||..||.+|+|+.++|+|+|.-
T Consensus 263 ~~is~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~ 297 (382)
T KOG0032|consen 263 DDISESAKDFIRKLLEFDPRKRLTAAQALQHPWIK 297 (382)
T ss_pred cccCHHHHHHHHHhcccCcccCCCHHHHhcCcccc
Confidence 56899999999999999999999999999998743
No 69
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.3e-40 Score=376.37 Aligned_cols=249 Identities=27% Similarity=0.468 Sum_probs=218.9
Q ss_pred CCeeEEEEecccCcEEEEEEEECC--ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWRG--TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~kG--t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|.+.+.||+|+||.||+|+.++ +.||+|.+.+.. ..+..++.+.+|++|++.|+|||||.++++|+. .
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g------r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt--~ 73 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG------RNEKELKNLRQEVRILRSLKHPNIVEMLESFET--S 73 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcC------CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcc--c
Confidence 467888999999999999999864 459999998752 123346788999999999999999999999988 6
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|+|.||+.| +|..+|... +.++++.+..++.+++.||.|||+++|+|||+||.|||++ ..+++||||||+|
T Consensus 74 ~~~~vVte~a~g-~L~~il~~d-~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~----~~~~~KlcdFg~A 147 (808)
T KOG0597|consen 74 AHLWVVTEYAVG-DLFTILEQD-GKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLE----KGGTLKLCDFGLA 147 (808)
T ss_pred ceEEEEehhhhh-hHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeec----CCCceeechhhhh
Confidence 689999999988 999999754 4599999999999999999999999999999999999998 8899999999999
Q ss_pred ccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
+..... ...+...|||.|||||++.+. .|+..+|+||||||+|||+.|++||-...-..++..|...... .|...
T Consensus 148 r~m~~~t~vltsikGtPlYmAPElv~e~--pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~--~p~~~ 223 (808)
T KOG0597|consen 148 RAMSTNTSVLTSIKGTPLYMAPELVEEQ--PYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVK--PPSTA 223 (808)
T ss_pred hhcccCceeeeeccCcccccCHHHHcCC--CccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCC--Ccccc
Confidence 976543 345668899999999999865 6788999999999999999999999988877888888766554 45578
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+..+..|++.+|.+||.+|.+-.+++.|..
T Consensus 224 S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF 253 (808)
T KOG0597|consen 224 SSSFVNFLQGLLIKDPAQRLTWTDLLGHPF 253 (808)
T ss_pred cHHHHHHHHHHhhcChhhcccHHHHhcChH
Confidence 999999999999999999999999998754
No 70
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.5e-39 Score=349.87 Aligned_cols=246 Identities=24% Similarity=0.408 Sum_probs=206.2
Q ss_pred EEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||+||+++++ ++.||||++++..... ......+..|..+++.+ +||||+++++++.. ...+|+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~--~~~~~i 73 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQ-----DDDVECTMTEKRILSLARNHPFLTQLYCCFQT--PDRLFF 73 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhh-----ccHHHHHHHHHHHHHhccCCCchhceeeEEEc--CCEEEE
Confidence 36999999999999984 6779999998642211 12245667788888876 69999999999987 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+++|+|..++.+. +.+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 74 v~Ey~~~g~L~~~i~~~-~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~----~~~~~kL~DfG~~~~~~~ 148 (320)
T cd05590 74 VMEFVNGGDLMFHIQKS-RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD----HEGHCKLADFGMCKEGIF 148 (320)
T ss_pred EEcCCCCchHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC----CCCcEEEeeCCCCeecCc
Confidence 99999999999888654 3588999999999999999999999999999999999998 67799999999987532
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
.........||+.|+|||++.+. .++.++|||||||++|+|++|+.||........+..+..... .++..++++++
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 224 (320)
T cd05590 149 NGKTTSTFCGTPDYIAPEILQEM--LYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV--VYPTWLSQDAV 224 (320)
T ss_pred CCCcccccccCccccCHHHHcCC--CCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCC--CCCCCCCHHHH
Confidence 22233446799999999999754 578899999999999999999999998888777777765433 45667899999
Q ss_pred HHHHHHhccCCCCCCCH------HHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSF------TEITNRLRV 1142 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSa------eELLe~Lr~ 1142 (1157)
+||.+||++||.+||++ ++++++.+.
T Consensus 225 ~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f 256 (320)
T cd05590 225 DILKAFMTKNPTMRLGSLTLGGEEAILRHPFF 256 (320)
T ss_pred HHHHHHcccCHHHCCCCCCCCCHHHHHcCCCc
Confidence 99999999999999998 888887665
No 71
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.9e-39 Score=348.47 Aligned_cols=246 Identities=24% Similarity=0.405 Sum_probs=206.7
Q ss_pred EEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||.||+|+++ ++.||||++++..... ......+..|.++++.+ +||||+++++++.. .+.+|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~--~~~~~l 73 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQ-----DDDVDCTMTEKRILALAAKHPFLTALHCCFQT--KDRLFF 73 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhh-----hhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCeEEE
Confidence 36999999999999985 5679999998643211 12245567788888866 79999999999987 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+++++|...+.+. +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 74 v~E~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~----~~~~~kL~Dfg~~~~~~~ 148 (321)
T cd05591 74 VMEYVNGGDLMFQIQRS-RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD----AEGHCKLADFGMCKEGIL 148 (321)
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC----CCCCEEEeecccceeccc
Confidence 99999999999888654 3588999999999999999999999999999999999998 67899999999987532
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
........+||+.|+|||++.+. .++.++|||||||++|+|++|+.||........+..+..... .++..+++++.
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~--~~p~~~~~~~~ 224 (321)
T cd05591 149 NGVTTTTFCGTPDYIAPEILQEL--EYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDV--LYPVWLSKEAV 224 (321)
T ss_pred CCccccccccCccccCHHHHcCC--CCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHH
Confidence 22233456799999999999754 578899999999999999999999999888887777765443 35667899999
Q ss_pred HHHHHHhccCCCCCC-------CHHHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARP-------SFTEITNRLRV 1142 (1157)
Q Consensus 1117 dLIkrCLqkDPskRP-------SaeELLe~Lr~ 1142 (1157)
+||.+||++||.+|| ++.+++++.+.
T Consensus 225 ~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~ 257 (321)
T cd05591 225 SILKAFMTKNPNKRLGCVASQGGEDAIKQHPFF 257 (321)
T ss_pred HHHHHHhccCHHHcCCCCCCCCCHHHHhcCCcc
Confidence 999999999999999 89999998764
No 72
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3.4e-39 Score=354.65 Aligned_cols=253 Identities=21% Similarity=0.350 Sum_probs=208.9
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||+||+++.+ +..||||++++.... .......+.+|+.++..++||+|+++++.+.+ .
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--~ 73 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADML-----EKEQVAHIRAERDILVEADGAWVVKMFYSFQD--K 73 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHh-----hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc--C
Confidence 37899999999999999999884 677999999764221 12234678889999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|+||||+++|+|.+++.+.+ .+++..++.++.|++.||+|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~----~~~~vkL~DfG~~ 148 (360)
T cd05627 74 RNLYLIMEFLPGGDMMTLLMKKD-TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD----AKGHVKLSDFGLC 148 (360)
T ss_pred CEEEEEEeCCCCccHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC----CCCCEEEeeccCC
Confidence 68999999999999999987544 588999999999999999999999999999999999998 6789999999998
Q ss_pred ccccCC------------------------------------cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHH
Q 001103 1033 RIKCNT------------------------------------LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAM 1076 (1157)
Q Consensus 1033 kl~~~~------------------------------------~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVIL 1076 (1157)
...... ......+||+.|+|||++.+. .++.++|||||||+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~--~~~~~~DiwSlGvil 226 (360)
T cd05627 149 TGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT--GYNKLCDWWSLGVIM 226 (360)
T ss_pred cccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC--CCCCcceecccccee
Confidence 643211 011235799999999999754 578899999999999
Q ss_pred HHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCC--CCcHHHHHHHHHHhccCCCCCC---CHHHHHHHHHH
Q 001103 1077 WEIITGEEPYANMHCGAIIGGILSNTLRPQIPE--RCDPEWRKLMEECWSFNPAARP---SFTEITNRLRV 1142 (1157)
Q Consensus 1077 YELLTGk~PF~g~~~eeil~~Il~~~lrpeip~--~iSpeLrdLIkrCLqkDPskRP---SaeELLe~Lr~ 1142 (1157)
|||++|+.||...........+........++. .+++++++||.+|+. ||.+|+ ++.+++++.+.
T Consensus 227 yel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f 296 (360)
T cd05627 227 YEMLIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFF 296 (360)
T ss_pred eecccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCC
Confidence 999999999998887777766654332223333 368999999999875 999997 58999998764
No 73
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=5.5e-39 Score=357.78 Aligned_cols=259 Identities=20% Similarity=0.328 Sum_probs=214.8
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+...+|++++.||+|+||.||++++. +..||+|++.+..... ......+.+|+.+++.++||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (370)
T cd05621 40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIK-----RSDSAFFWEERDIMAFANSPWVVQLFCAFQD 114 (370)
T ss_pred CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----hhhHHHHHHHHHHHHhCCCCCEeeEEEEEEc
Confidence 45578999999999999999999984 6679999997642211 1123557789999999999999999999987
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
...+|+||||+++|+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++ ..+.+||+||
T Consensus 115 --~~~~~lv~Ey~~gg~L~~~l~~~--~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~----~~~~~kL~DF 186 (370)
T cd05621 115 --DKYLYMVMEYMPGGDLVNLMSNY--DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD----KHGHLKLADF 186 (370)
T ss_pred --CCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC----CCCCEEEEec
Confidence 56899999999999999998643 478899999999999999999999999999999999998 7789999999
Q ss_pred CCcccccCCc--ccCCCCCCCcccCcccccCCC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1030 GLSRIKCNTL--VSGGVRGTLPWMAPELLNGSN--NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1030 GLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~--~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
|++....... .....+||+.|+|||++.+.. ..++.++|||||||+||+|++|+.||........+..+.......
T Consensus 187 G~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~ 266 (370)
T cd05621 187 GTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSL 266 (370)
T ss_pred ccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCccc
Confidence 9998653322 223567999999999987532 237889999999999999999999999888777777776654444
Q ss_pred CCCC--CCcHHHHHHHHHHhccCCCC--CCCHHHHHHHHHHH
Q 001103 1106 QIPE--RCDPEWRKLMEECWSFNPAA--RPSFTEITNRLRVM 1143 (1157)
Q Consensus 1106 eip~--~iSpeLrdLIkrCLqkDPsk--RPSaeELLe~Lr~L 1143 (1157)
.++. .+++.++++|..||+.++.+ |+++.+++++.|.-
T Consensus 267 ~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~ 308 (370)
T cd05621 267 NFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFK 308 (370)
T ss_pred CCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccC
Confidence 4444 46899999999999865544 89999999998763
No 74
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.3e-38 Score=340.57 Aligned_cols=259 Identities=29% Similarity=0.565 Sum_probs=213.0
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEE--CCce----EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEe
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKW--RGTD----IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFY 944 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~--kGt~----VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLy 944 (1157)
.+...+|++++.||+|+||+||+|++ .+.. ||||+++... .....+.+.+|+.+++.++||||++++
T Consensus 3 ~~~~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~niv~~~ 75 (316)
T cd05108 3 ILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-------SPKANKEILDEAYVMASVDNPHVCRLL 75 (316)
T ss_pred ccchhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC-------CHHHHHHHHHHHHHHHhCCCCCCCeEE
Confidence 45667899999999999999999987 3333 8899876431 122346788899999999999999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
+++... ..++++||+.+|+|.+++.+....+++..++.++.|++.||+|||+++|+||||||+|||++ ..+.+
T Consensus 76 g~~~~~---~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~----~~~~~ 148 (316)
T cd05108 76 GICLTS---TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK----TPQHV 148 (316)
T ss_pred EEEcCC---CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec----CCCcE
Confidence 998763 46789999999999999987666788999999999999999999999999999999999998 66789
Q ss_pred EEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhh
Q 001103 1025 KVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILS 1100 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~ 1100 (1157)
||+|||+++....... .....++..|+|||.+.+. .++.++|||||||++|||++ |+.||.+....... .+..
T Consensus 149 kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~-~~~~ 225 (316)
T cd05108 149 KITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHR--IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS-SILE 225 (316)
T ss_pred EEccccccccccCCCcceeccCCccceeecChHHhccC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHh
Confidence 9999999986443221 1223356789999998754 57899999999999999998 99999877655543 3444
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1101 NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1101 ~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
.......+..++.++.++|.+||..+|.+||++.+++..+..+...
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 226 KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 4444555677889999999999999999999999999998877643
No 75
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=2.3e-38 Score=338.94 Aligned_cols=258 Identities=24% Similarity=0.377 Sum_probs=207.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|.++++||+|+||+||+++++ +..||+|+++...... ....+.+|+.++++++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 75 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG-------APCTAIREVSLLKDLKHANIVTLHDIVHT-- 75 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC-------cchhHHHHHHHHHhCCCCCcceEEEEEee--
Confidence 468999999999999999999884 6679999987542111 12346689999999999999999999887
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
.+..++||||+.+ +|..++...+..+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||+
T Consensus 76 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~----~~~~~kl~Dfg~ 150 (309)
T cd07872 76 DKSLTLVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN----ERGELKLADFGL 150 (309)
T ss_pred CCeEEEEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC----CCCCEEECcccc
Confidence 5689999999976 78887766666688999999999999999999999999999999999998 677899999999
Q ss_pred cccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC--------
Q 001103 1032 SRIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT-------- 1102 (1157)
Q Consensus 1032 Akl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~-------- 1102 (1157)
+...... .......+|+.|+|||++.+. ..++.++|||||||++|+|++|+.||......+.+..+....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 229 (309)
T cd07872 151 ARAKSVPTKTYSNEVVTLWYRPPDVLLGS-SEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETW 229 (309)
T ss_pred ceecCCCccccccccccccccCCHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence 8754322 222335689999999998753 357899999999999999999999998776554433332110
Q ss_pred -------------CCC-------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1103 -------------LRP-------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1103 -------------lrp-------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
.+. .....+++++++||.+||+.||.+|||+.+++++.+.-...
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 230 PGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence 000 01124688999999999999999999999999998876543
No 76
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.7e-38 Score=327.16 Aligned_cols=251 Identities=35% Similarity=0.643 Sum_probs=211.6
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
+...+|++.+.||+|+||.||++..++..+|+|.++... ..+.+.+|+.++++++|++++++++++...
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~----------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~- 71 (256)
T cd05082 3 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA----------TAQAFLAEASVMTQLRHSNLVQLLGVIVEE- 71 (256)
T ss_pred ccHHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCCc----------hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-
Confidence 455689999999999999999999999999999886431 135678999999999999999999976542
Q ss_pred CCcEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
....+++|||+++++|.+++.+.. ..+++..++.++.|++.||+|||++||+||||||+|||++ .++.+||+|||
T Consensus 72 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~----~~~~~kl~dfg 147 (256)
T cd05082 72 KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS----EDNVAKVSDFG 147 (256)
T ss_pred CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc----CCCcEEecCCc
Confidence 457899999999999999987643 3488999999999999999999999999999999999998 67799999999
Q ss_pred CcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1031 LSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1031 LAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
++....... ....++..|+|||++.+. .++.++|||||||++|+|++ |+.||...........+. ....+..+.
T Consensus 148 ~~~~~~~~~--~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~ 222 (256)
T cd05082 148 LTKEASSTQ--DTGKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE-KGYKMDAPD 222 (256)
T ss_pred cceeccccC--CCCccceeecCHHHHccC--CCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh-cCCCCCCCC
Confidence 987543322 223456789999998754 57889999999999999997 999998777666555553 334456677
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.+++.+++||.+||+.+|++|||+.++++.|..
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 223 GCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 889999999999999999999999999998864
No 77
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=4.1e-38 Score=327.72 Aligned_cols=254 Identities=34% Similarity=0.651 Sum_probs=212.9
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+...+|++.+.||+|+||.||+|.++ ++.||+|++.... .....+.+|+++++.++||||+++++++..
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 73 (263)
T cd05052 3 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 73 (263)
T ss_pred CchHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---------hHHHHHHHHHHHHHhCCCCChhheEEEEcC
Confidence 44568999999999999999999884 6779999876431 113567889999999999999999999877
Q ss_pred CCCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
...++++|||+++++|.+++... ...+++..++.++.|++.||+|||++|++||||||+|||++ .++.+||+|
T Consensus 74 --~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~----~~~~~kl~d 147 (263)
T cd05052 74 --EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG----ENHLVKVAD 147 (263)
T ss_pred --CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc----CCCcEEeCC
Confidence 56789999999999999988653 34588999999999999999999999999999999999998 677899999
Q ss_pred cCCcccccCCccc--CCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1029 FGLSRIKCNTLVS--GGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1029 FGLAkl~~~~~~s--ts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
||++......... ....++..|+|||.+.+. .++.++|||||||++|||++ |..||.+....+....+. .....
T Consensus 148 f~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~-~~~~~ 224 (263)
T cd05052 148 FGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYN--KFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KGYRM 224 (263)
T ss_pred CccccccccceeeccCCCCCccccCCHHHhccC--CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH-CCCCC
Confidence 9998765433221 122346689999998754 57889999999999999998 999998877666555543 34556
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
..+..+++++.++|.+||+.+|++||++.++++.|..+
T Consensus 225 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 225 ERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 67788999999999999999999999999999998765
No 78
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.8e-38 Score=346.77 Aligned_cols=254 Identities=24% Similarity=0.339 Sum_probs=201.1
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++++.||+|+||.||++++ .|..||||++..... .......+.+|+.+++.++||||+++++++....
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 93 (359)
T cd07876 20 LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ------NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK 93 (359)
T ss_pred hhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc------chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC
Confidence 36899999999999999999987 467899999875421 1122456778999999999999999999986532
Q ss_pred ----CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 ----GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ----~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
...+|+||||+.+ +|...+.. .+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~----~~~~~kl~ 165 (359)
T cd07876 94 SLEEFQDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK----SDCTLKIL 165 (359)
T ss_pred CccccceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC----CCCCEEEe
Confidence 1357999999976 55555532 378888999999999999999999999999999999998 67899999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC----
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL---- 1103 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l---- 1103 (1157)
|||++.............||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+......+..+.....
T Consensus 166 Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 243 (359)
T cd07876 166 DFGLARTACTNFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 243 (359)
T ss_pred cCCCccccccCccCCCCcccCCCCCchhccCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcH
Confidence 99999765444444456799999999999864 578899999999999999999999987654332221111000
Q ss_pred ----------------CC--------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1104 ----------------RP--------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1104 ----------------rp--------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.+ ......++++++||.+||..||++|||+.+++++.|..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~ 319 (359)
T cd07876 244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRHPYIT 319 (359)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcCchhh
Confidence 00 01112467899999999999999999999999998764
No 79
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.4e-38 Score=346.66 Aligned_cols=257 Identities=22% Similarity=0.320 Sum_probs=209.8
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||+||+++.. ++.||||++.+.... .....+.+.+|+.+++.++|+||+++++++.+ .
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~ 73 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEML-----KRAETACFREERDVLVNGDRRWITNLHYAFQD--E 73 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-----hhhhHHHHHHHHHHHHhCCCCCCCceEEEEec--C
Confidence 47999999999999999999884 677999999753211 12234567889999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+.+|+||||+.+|+|.+++.+....+++..+..++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~----~~~~~kl~Dfg~~ 149 (331)
T cd05597 74 NNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD----KNGHIRLADFGSC 149 (331)
T ss_pred CeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC----CCCCEEEEECCce
Confidence 689999999999999999977666789999999999999999999999999999999999998 6779999999998
Q ss_pred ccccCCc--ccCCCCCCCcccCcccccCC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCC
Q 001103 1033 RIKCNTL--VSGGVRGTLPWMAPELLNGS---NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1033 kl~~~~~--~sts~~GTp~YmAPEVL~G~---~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpei 1107 (1157)
....... ......||+.|+|||++.+. ...++.++|||||||++|+|++|+.||......+....+........+
T Consensus 150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~ 229 (331)
T cd05597 150 LRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQF 229 (331)
T ss_pred eecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccC
Confidence 6543322 22234699999999998631 234688999999999999999999999887766666666543322222
Q ss_pred ---CCCCcHHHHHHHHHHhccCCCC--CCCHHHHHHHHHH
Q 001103 1108 ---PERCDPEWRKLMEECWSFNPAA--RPSFTEITNRLRV 1142 (1157)
Q Consensus 1108 ---p~~iSpeLrdLIkrCLqkDPsk--RPSaeELLe~Lr~ 1142 (1157)
...+++++++||.+||..++.+ |+++++++++.+.
T Consensus 230 ~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~ 269 (331)
T cd05597 230 PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFF 269 (331)
T ss_pred CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCC
Confidence 2347899999999999765444 7899999999765
No 80
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=2.4e-39 Score=349.05 Aligned_cols=245 Identities=26% Similarity=0.405 Sum_probs=205.4
Q ss_pred EEecccCcEEEEEEEE-----CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcE
Q 001103 881 QELGSGTFGTVYRGKW-----RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~-----kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~L 955 (1157)
+.||+|+||.||+++. .|+.||+|++++.... ......+.+|++++++++||||+++++++.. .+.+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~~ 73 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK------VRDRVRTKMERDILAEVNHPFIVKLHYAFQT--EGKL 73 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh------hhhHHHHHHHHHHHHhCCCCCcccEEEEEEc--CCEE
Confidence 6799999999999875 4678999999864221 1123456789999999999999999999987 5689
Q ss_pred EEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccc
Q 001103 956 ATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~ 1035 (1157)
|+||||+.+++|.+++.+. ..+++..++.++.||+.||.|||+++|+||||||+|||++ .++.+||+|||++...
T Consensus 74 ~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~----~~~~~kL~Dfg~~~~~ 148 (318)
T cd05582 74 YLILDFLRGGDLFTRLSKE-VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD----EEGHIKLTDFGLSKES 148 (318)
T ss_pred EEEEcCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC----CCCcEEEeeccCCccc
Confidence 9999999999999988654 3589999999999999999999999999999999999998 6778999999998764
Q ss_pred cCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHH
Q 001103 1036 CNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPE 1114 (1157)
Q Consensus 1036 ~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpe 1114 (1157)
... .......||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+.... ..++..+++.
T Consensus 149 ~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~--~~~p~~~~~~ 224 (318)
T cd05582 149 IDHEKKAYSFCGTVEYMAPEVVNRR--GHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAK--LGMPQFLSPE 224 (318)
T ss_pred CCCCCceecccCChhhcCHHHHcCC--CCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCC--CCCCCCCCHH
Confidence 433 233456799999999999754 56889999999999999999999999887777766665443 3467778999
Q ss_pred HHHHHHHHhccCCCCCCC-----HHHHHHHHHH
Q 001103 1115 WRKLMEECWSFNPAARPS-----FTEITNRLRV 1142 (1157)
Q Consensus 1115 LrdLIkrCLqkDPskRPS-----aeELLe~Lr~ 1142 (1157)
+++||.+||+.||.+||+ +.+++++.+.
T Consensus 225 ~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~ 257 (318)
T cd05582 225 AQSLLRALFKRNPANRLGAGPDGVEEIKRHPFF 257 (318)
T ss_pred HHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCc
Confidence 999999999999999999 6677776543
No 81
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.2e-38 Score=354.76 Aligned_cols=259 Identities=20% Similarity=0.321 Sum_probs=213.0
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
.+...+|++++.||+|+||.||+++++ +..||+|++.+.... .......+.+|+.+++.++||||+++++.+.
T Consensus 39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~-----~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~ 113 (371)
T cd05622 39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMI-----KRSDSAFFWEERDIMAFANSPWVVQLFYAFQ 113 (371)
T ss_pred CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhh-----hhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 345679999999999999999999984 667999998764221 1122355788999999999999999999998
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
+ ...+|+||||+++|+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++ .++.+||+|
T Consensus 114 ~--~~~~~lv~Ey~~gg~L~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~----~~~~ikL~D 185 (371)
T cd05622 114 D--DRYLYMVMEYMPGGDLVNLMSNY--DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD----KSGHLKLAD 185 (371)
T ss_pred c--CCEEEEEEcCCCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC----CCCCEEEEe
Confidence 7 56899999999999999998653 478889999999999999999999999999999999998 678999999
Q ss_pred cCCcccccCCc--ccCCCCCCCcccCcccccCCC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC
Q 001103 1029 FGLSRIKCNTL--VSGGVRGTLPWMAPELLNGSN--NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR 1104 (1157)
Q Consensus 1029 FGLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~--~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr 1104 (1157)
||++....... .....+||+.|+|||++.+.. ..++.++|||||||+||||++|+.||...........+......
T Consensus 186 fG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~ 265 (371)
T cd05622 186 FGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNS 265 (371)
T ss_pred CCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCc
Confidence 99997643322 233567999999999987532 23788999999999999999999999988877777777654333
Q ss_pred CCC--CCCCcHHHHHHHHHHhccCCCC--CCCHHHHHHHHHH
Q 001103 1105 PQI--PERCDPEWRKLMEECWSFNPAA--RPSFTEITNRLRV 1142 (1157)
Q Consensus 1105 pei--p~~iSpeLrdLIkrCLqkDPsk--RPSaeELLe~Lr~ 1142 (1157)
..+ ...+++++++||..||..++.+ |+++++++++++.
T Consensus 266 ~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~ 307 (371)
T cd05622 266 LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFF 307 (371)
T ss_pred ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCccc
Confidence 333 3468999999999999854443 7899999998865
No 82
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.4e-39 Score=344.41 Aligned_cols=255 Identities=27% Similarity=0.375 Sum_probs=217.0
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|..+++||+|.||.||+|++ +|+.||||+++.....+.- -....||+++|+.++|+||+.+.++|.. .
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi------~~talREIK~Lqel~h~nIi~LiD~F~~--~ 73 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI------NRTALREIKLLQELKHPNIIELIDVFPH--K 73 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc------cHHHHHHHHHHHHccCcchhhhhhhccC--C
Confidence 4688889999999999999998 5788999999976433221 2456799999999999999999999988 6
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+.+.||+|||+. +|+.+++.....+...++..++.++++||+|||++.|+||||||.|+|++ .++.+||+|||+|
T Consensus 74 ~~l~lVfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis----~~g~lKiADFGLA 148 (318)
T KOG0659|consen 74 SNLSLVFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLIS----SDGQLKIADFGLA 148 (318)
T ss_pred CceEEEEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEc----CCCcEEeecccch
Confidence 689999999976 99999999999999999999999999999999999999999999999999 8889999999999
Q ss_pred ccccCCcc-cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC---CC-
Q 001103 1033 RIKCNTLV-SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP---QI- 1107 (1157)
Q Consensus 1033 kl~~~~~~-sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp---ei- 1107 (1157)
+....+.. .+..+-|.+|.|||.+.|. ..|+..+|+||+|||+.||+-|.+-|.+..+-+.+..|....-.| ++
T Consensus 149 r~f~~p~~~~~~~V~TRWYRAPELLfGs-r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP 227 (318)
T KOG0659|consen 149 RFFGSPNRIQTHQVVTRWYRAPELLFGS-RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWP 227 (318)
T ss_pred hccCCCCcccccceeeeeccChHHhccc-hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCc
Confidence 97655433 3334789999999999987 478999999999999999999999999988777766664321111 11
Q ss_pred ----------------------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1108 ----------------------PERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1108 ----------------------p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
-..++.++.+|+..||..||.+|.++.|.+++-.+-
T Consensus 228 ~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~~yf~ 285 (318)
T KOG0659|consen 228 EMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKHPYFK 285 (318)
T ss_pred cccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcchhhh
Confidence 112467788999999999999999999999987765
No 83
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=4.6e-38 Score=327.20 Aligned_cols=254 Identities=35% Similarity=0.615 Sum_probs=212.2
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC-----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR-----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k-----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
..+|++.+.||+|+||+||+|+++ ...||||+++... .......+.+|+.+++.++||||+++++.+.
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 75 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-------SDKQRLDFLTEASIMGQFDHPNIIRLEGVVT 75 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-------ChHHHHHHHHHHHHHHhCCCCCcceEeEEEe
Confidence 457899999999999999999884 2358999876531 1222456888999999999999999999987
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
. .+..+++|||+++++|.+++......+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+|
T Consensus 76 ~--~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~----~~~~~~l~d 149 (266)
T cd05033 76 K--SRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN----SNLVCKVSD 149 (266)
T ss_pred c--CCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc----CCCCEEECc
Confidence 7 5678999999999999999977666789999999999999999999999999999999999998 677899999
Q ss_pred cCCcccccC--Cc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCC
Q 001103 1029 FGLSRIKCN--TL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLR 1104 (1157)
Q Consensus 1029 FGLAkl~~~--~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lr 1104 (1157)
||++..... .. ......++..|+|||.+.+. .++.++||||||+++|+|++ |..||...........+... ..
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~--~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~ 226 (266)
T cd05033 150 FGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYR--KFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDG-YR 226 (266)
T ss_pred cchhhcccccccceeccCCCCCccccChhhhccC--CCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcC-CC
Confidence 999986531 11 12223456789999998753 57889999999999999998 99999887766666655433 33
Q ss_pred CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1105 PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1105 peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
...+..+++.+.+|+.+||+.+|++||++.+++++|..+
T Consensus 227 ~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 227 LPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 445667899999999999999999999999999999765
No 84
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=1e-38 Score=327.22 Aligned_cols=251 Identities=33% Similarity=0.491 Sum_probs=203.4
Q ss_pred eeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
|++++.||+|+||+||+++.. +..||+|++.... ..........+|+.++++++||||+++++++.. ...
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~------~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~ 72 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSE------IEEEEREENIREIKILRRLRHPNIVQILDVFQD--DNY 72 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTT------HHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE--SSE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccc------ccccccchhhhhhhccccccccccccccccccc--ccc
Confidence 789999999999999999995 4469999998752 112223344569999999999999999999988 668
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
++++|||+.+++|.+++. ..+.+++..++.++.||+.||.|||+++|+|+||||+|||++ .++.++|+|||.+..
T Consensus 73 ~~~v~~~~~~~~L~~~l~-~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~----~~~~~~l~Dfg~~~~ 147 (260)
T PF00069_consen 73 LYIVMEYCPGGSLQDYLQ-KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD----ENGEVKLIDFGSSVK 147 (260)
T ss_dssp EEEEEEEETTEBHHHHHH-HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES----TTSEEEESSGTTTEE
T ss_pred cccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccc----ccccccccccccccc
Confidence 999999999999999997 445589999999999999999999999999999999999999 788999999999875
Q ss_pred c-cCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---hHHHHHhhhcCCCCCC--C
Q 001103 1035 K-CNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC---GAIIGGILSNTLRPQI--P 1108 (1157)
Q Consensus 1035 ~-~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~---eeil~~Il~~~lrpei--p 1108 (1157)
. ..........++..|+|||++.. ...++.++||||||+++|+|++|..||..... ...+............ .
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (260)
T PF00069_consen 148 LSENNENFNPFVGTPEYMAPEVLQQ-GKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQS 226 (260)
T ss_dssp STSTTSEBSSSSSSGGGSCHHHHTT-TSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSH
T ss_pred ccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccchhhhhhhhhccccccccccccc
Confidence 2 33334445679999999999872 13578999999999999999999999998732 2233322222111111 1
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
...++.+.++|.+||+.||++||++.+++++.|
T Consensus 227 ~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~ 259 (260)
T PF00069_consen 227 REKSEELRDLIKKMLSKDPEQRPSAEELLKHPW 259 (260)
T ss_dssp TTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGG
T ss_pred chhHHHHHHHHHHHccCChhHCcCHHHHhcCCC
Confidence 123489999999999999999999999998765
No 85
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=8.8e-39 Score=346.15 Aligned_cols=246 Identities=25% Similarity=0.455 Sum_probs=202.0
Q ss_pred EEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHh-CCCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISN-LHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~-L~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||+||+|+++ +..||||++++..... ......+..|..++.. ++||||+++++++.. ...+|+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~--~~~~~l 73 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-----DDDVECTMVERRVLALAWEHPFLTHLFCTFQT--KEHLFF 73 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----hhhHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEE
Confidence 36999999999999985 5569999998653211 1123445566667665 489999999999887 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN 1037 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~ 1037 (1157)
||||+++|+|..++.... .+++..+..++.||+.||.|||+++|+||||||+|||++ .++.+||+|||+++....
T Consensus 74 v~e~~~gg~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~----~~~~~kL~Dfg~a~~~~~ 148 (316)
T cd05592 74 VMEYLNGGDLMFHIQSSG-RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD----KDGHIKIADFGMCKENMN 148 (316)
T ss_pred EEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC----CCCCEEEccCcCCeECCC
Confidence 999999999998886544 589999999999999999999999999999999999998 677999999999975322
Q ss_pred -CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1038 -TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1038 -~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+......+..+... .+.++..++.++.
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~--~~~~~~~~~~~~~ 224 (316)
T cd05592 149 GEGKASTFCGTPDYIAPEILKGQ--KYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILND--RPHFPRWISKEAK 224 (316)
T ss_pred CCCccccccCCccccCHHHHcCC--CCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC--CCCCCCCCCHHHH
Confidence 2333456799999999999864 5789999999999999999999999988877776666533 3456778899999
Q ss_pred HHHHHHhccCCCCCCCHH-HHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSFT-EITNRLRV 1142 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSae-ELLe~Lr~ 1142 (1157)
+||.+||+.||.+||++. +++++.+.
T Consensus 225 ~ll~~~l~~~P~~R~~~~~~l~~h~~~ 251 (316)
T cd05592 225 DCLSKLFERDPTKRLGVDGDIRQHPFF 251 (316)
T ss_pred HHHHHHccCCHHHcCCChHHHHcCccc
Confidence 999999999999999865 77776543
No 86
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=357.30 Aligned_cols=262 Identities=23% Similarity=0.365 Sum_probs=222.4
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
.+...+|++..+||.|..++||+|+. ++..||||++..+. .....+.+.+|++.|+.++||||+++|..|.
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEk-------c~~~ld~l~kE~~~msl~~HPNIv~~~~sFv 94 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEK-------CNNDLDALRKEVQTMSLIDHPNIVTYHCSFV 94 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhh-------hhhhHHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence 35568999999999999999999988 57789999998642 1222678899999999999999999999998
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
. +..+|+||.||.+|++.++++.. ...+++..+..|++++++||.|||++|.||||||+.||||+ .+|.|||+
T Consensus 95 v--~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~----~dG~VkLa 168 (516)
T KOG0582|consen 95 V--DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILID----SDGTVKLA 168 (516)
T ss_pred e--cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEc----CCCcEEEc
Confidence 8 56899999999999999999863 34599999999999999999999999999999999999999 88899999
Q ss_pred ecCCcccccCCc-----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC
Q 001103 1028 DFGLSRIKCNTL-----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT 1102 (1157)
Q Consensus 1028 DFGLAkl~~~~~-----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~ 1102 (1157)
|||.+....... ....++||++|||||+++..-..|+.|+||||||++..||.+|..||......+++..-+.+.
T Consensus 169 dFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~ 248 (516)
T KOG0582|consen 169 DFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQND 248 (516)
T ss_pred CceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCC
Confidence 999876432211 125678999999999976666789999999999999999999999999999888776666554
Q ss_pred CCCCCC--------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1103 LRPQIP--------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1103 lrpeip--------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
.+.... ...+..++++|..||.+||.+|||+.+++++-++-..
T Consensus 249 pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 249 PPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKA 299 (516)
T ss_pred CCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhc
Confidence 432211 2356789999999999999999999999998766543
No 87
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.6e-38 Score=345.40 Aligned_cols=257 Identities=27% Similarity=0.457 Sum_probs=207.0
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+...+|++.++||+|+||.||+++++ +..+|+|++.... .......+.+|+++++.++||||+++++++..
T Consensus 2 l~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 74 (333)
T cd06650 2 LKDDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-------KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS 74 (333)
T ss_pred cchhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHHCCCCcccceeEEEEE
Confidence 44578999999999999999999985 6679999887531 12234678899999999999999999999987
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeeccCCCCCCeEEEEe
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMK-NIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSk-GIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
.+.+++||||+.+++|.+++.+.+ .+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+|
T Consensus 75 --~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~----~~~~~kL~D 147 (333)
T cd06650 75 --DGEISICMEHMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN----SRGEIKLCD 147 (333)
T ss_pred --CCEEEEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc----CCCCEEEee
Confidence 568999999999999999987543 488899999999999999999985 799999999999998 677899999
Q ss_pred cCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHh----------
Q 001103 1029 FGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGI---------- 1098 (1157)
Q Consensus 1029 FGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~I---------- 1098 (1157)
||++...... ......||..|+|||++.+. .++.++|+|||||++|+|++|+.||...........+
T Consensus 148 fg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 224 (333)
T cd06650 148 FGVSGQLIDS-MANSFVGTRSYMSPERLQGT--HYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAE 224 (333)
T ss_pred CCcchhhhhh-ccccCCCCccccCHHHhcCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccc
Confidence 9998754332 22345799999999999754 5788999999999999999999999764432221100
Q ss_pred ---------------------------------hhcCCCCCCC-CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1099 ---------------------------------LSNTLRPQIP-ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1099 ---------------------------------l~~~lrpeip-~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
......+.++ ...+.++++||.+||++||.+|||+.+++++.+.-.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~ 304 (333)
T cd06650 225 SETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 304 (333)
T ss_pred cccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhc
Confidence 0011111111 235788999999999999999999999999887654
Q ss_pred H
Q 001103 1145 T 1145 (1157)
Q Consensus 1145 ~ 1145 (1157)
.
T Consensus 305 ~ 305 (333)
T cd06650 305 S 305 (333)
T ss_pred C
Confidence 3
No 88
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=5.6e-38 Score=325.33 Aligned_cols=257 Identities=21% Similarity=0.390 Sum_probs=210.5
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||.||+|++ .++.||||.++...... ......+.+|+++++.++||||+++++.+.+ .
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 74 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMD-----AKARQDCVKEIDLLKQLNHPNVIKYLDSFIE--D 74 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCC-----HHHHHHHHHHHHHHHhCCCcceeeeeeeEEE--C
Confidence 5799999999999999999987 57889999887532211 2234667889999999999999999999887 5
Q ss_pred CcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 953 GTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
+..+++|||+++++|.+++.. ....+++..++.++.|++.||.|||+++|+|+||||+|||++ ..+.++|+||
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~----~~~~~~l~d~ 150 (267)
T cd08228 75 NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT----ATGVVKLGDL 150 (267)
T ss_pred CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc----CCCCEEECcc
Confidence 688999999999999988753 334578899999999999999999999999999999999998 6678999999
Q ss_pred CCcccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--hHHHHHhhhcCCCCC
Q 001103 1030 GLSRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC--GAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1030 GLAkl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~--eeil~~Il~~~lrpe 1106 (1157)
|++....... ......|++.|+|||.+.+. .++.++|+||||+++|+|++|+.||..... ......+.....++.
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 228 (267)
T cd08228 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPL 228 (267)
T ss_pred ccceeccchhHHHhcCCCCccccChhhhccC--CCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCC
Confidence 9987643322 22335689999999998754 568899999999999999999999965432 334444433344444
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.....+..+++||.+||+.+|.+||++.++++.++.++
T Consensus 229 ~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 229 PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 44567889999999999999999999999999998764
No 89
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.4e-38 Score=332.20 Aligned_cols=253 Identities=27% Similarity=0.355 Sum_probs=198.7
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC---CCCceeEEeeeeecC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL---HHPNVVAFYGVVPNG 950 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L---~HPNIVkLygvf~de 950 (1157)
+|++++.||+|+||+||+++++ ++.||+|.++........ ...+.+|+.+++.+ +||||+++++++...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~------~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~ 74 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL------PLSTVREVALLKRLEAFDHPNIVRLMDVCATS 74 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC------chHHHHHHHHHHHhhhcCCCCeeeeeeeeccc
Confidence 5889999999999999999884 677999998764221111 12344566666554 799999999987642
Q ss_pred ---CCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 951 ---PGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 951 ---~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
....++++|||+.+ +|.+++... ...+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||
T Consensus 75 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~----~~~~~kl 149 (288)
T cd07863 75 RTDRETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT----SGGQVKL 149 (288)
T ss_pred cCCCCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC----CCCCEEE
Confidence 23468999999985 888877653 34589999999999999999999999999999999999998 6778999
Q ss_pred EecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC----
Q 001103 1027 GDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT---- 1102 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~---- 1102 (1157)
+|||++.............||..|+|||++.+. .++.++|||||||++|+|++|++||........+..+....
T Consensus 150 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd07863 150 ADFGLARIYSCQMALTPVVVTLWYRAPEVLLQS--TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 227 (288)
T ss_pred CccCccccccCcccCCCccccccccCchHhhCC--CCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCC
Confidence 999999865544444456789999999999754 57899999999999999999999998776655444443210
Q ss_pred --------------CCC-------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 --------------LRP-------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 --------------lrp-------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+.. .+...++..+++||.+||++||.+|||+.+++.+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~ 287 (288)
T cd07863 228 EDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287 (288)
T ss_pred hhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 000 111346788999999999999999999999998764
No 90
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=9.1e-39 Score=347.85 Aligned_cols=247 Identities=22% Similarity=0.371 Sum_probs=201.6
Q ss_pred EEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||.||+++++ +..||||++++.... .......+.+|..+++.+ +||||+++++++.+ ...+|+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~-----~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~--~~~~~l 73 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN-----DDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT--ESRLFF 73 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc--CCEEEE
Confidence 36999999999999984 677999999864221 122345678899999998 79999999999987 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+++|+|..++.+. +.+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||+++...
T Consensus 74 v~e~~~~g~L~~~~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~----~~~~~kL~Dfg~~~~~~~ 148 (329)
T cd05588 74 VIEFVSGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD----AEGHIKLTDYGMCKEGIR 148 (329)
T ss_pred EEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC----CCCCEEECcCcccccccc
Confidence 99999999998888654 4589999999999999999999999999999999999998 67799999999987422
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------h-hHHHHHhhhcCCCCCC
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH--------C-GAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~--------~-eeil~~Il~~~lrpei 1107 (1157)
........+||+.|+|||++.+. .++.++|+|||||++|+|++|+.||.... . ......+... ...+
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 224 (329)
T cd05588 149 PGDTTSTFCGTPNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK--QIRI 224 (329)
T ss_pred CCCccccccCCccccCHHHHcCC--CCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC--CCCC
Confidence 22233456799999999999864 57889999999999999999999996321 1 1122333322 3346
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCCC------HHHHHHHHHHH
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARPS------FTEITNRLRVM 1143 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRPS------aeELLe~Lr~L 1143 (1157)
|..+++++.+||.+||+.||.+|++ +.+++++.|..
T Consensus 225 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~ 266 (329)
T cd05588 225 PRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266 (329)
T ss_pred CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCC
Confidence 7788999999999999999999987 78999886653
No 91
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3.5e-38 Score=328.41 Aligned_cols=249 Identities=36% Similarity=0.614 Sum_probs=208.6
Q ss_pred CCCeeEEEEecccCcEEEEEEEECCc-eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWRGT-DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~kGt-~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..+|++++.||+|+||+||++++++. .+|||.++.... ....+.+|+.++++++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 71 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM---------SEDEFIEEAKVMMKLSHEKLVQLYGVCTK--Q 71 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc---------cHHHHHHHHHHHhcCCCCCeeeEEEEEcc--C
Confidence 46799999999999999999988654 599998875421 12457889999999999999999999876 4
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...+++|||+.+++|.+++......+++..++.++.|++.||.|||++||+|+||||+|||++ .++.+||+|||++
T Consensus 72 ~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~----~~~~~kl~d~g~~ 147 (256)
T cd05113 72 RPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD----DQGCVKVSDFGLS 147 (256)
T ss_pred CCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc----CCCCEEECCCccc
Confidence 578999999999999999976555689999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCcc--cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1033 RIKCNTLV--SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1033 kl~~~~~~--sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
+....... .....++..|+|||.+.+. .++.++|+|||||++|+|++ |+.||...........+... .+...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~~pe~~~~~--~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~ 224 (256)
T cd05113 148 RYVLDDEYTSSVGSKFPVRWSPPEVLLYS--KFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQG-LRLYRPH 224 (256)
T ss_pred eecCCCceeecCCCccChhhCCHHHHhcC--cccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcC-CCCCCCC
Confidence 75433221 1223356789999999754 57889999999999999998 99999887766666665443 3344566
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
..+..+++++.+||..+|.+||++.+|++.|
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 225 LASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 6789999999999999999999999999876
No 92
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=5.3e-38 Score=330.22 Aligned_cols=254 Identities=33% Similarity=0.578 Sum_probs=208.4
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE------CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeee
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW------RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGV 946 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~------kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygv 946 (1157)
...+|++.+.||+|+||+||+|.+ .+..+|+|.++... .......+.+|+.++++++||||++++++
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~~~~~ 75 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-------NPQQWGEFQQEASLMAELHHPNIVCLLGV 75 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-------CHHHHHHHHHHHHHHhhCCCCCeeeEEEE
Confidence 346889999999999999999985 24569999887431 11224567889999999999999999999
Q ss_pred eecCCCCcEEEEEEeecCCcchhhhccc----------------cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCcc
Q 001103 947 VPNGPGGTMATVTEYMVNGSLRHVLARK----------------DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCD 1010 (1157)
Q Consensus 947 f~de~~~~LyLVMEYmeGGSL~dlLkr~----------------gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPE 1010 (1157)
+.. ....|++|||+.+++|.+++... ...+++..++.++.|++.||.|||++||+||||||+
T Consensus 76 ~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~ 153 (283)
T cd05090 76 VTQ--EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAAR 153 (283)
T ss_pred Eec--CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccc
Confidence 877 55789999999999999988422 124788899999999999999999999999999999
Q ss_pred ceeeccCCCCCCeEEEEecCCcccccCC---cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCC
Q 001103 1011 NLLVNLRDPQRPICKVGDFGLSRIKCNT---LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPY 1086 (1157)
Q Consensus 1011 NILLd~dd~e~g~VKLiDFGLAkl~~~~---~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF 1086 (1157)
|||++ ..+.+||+|||+++..... .......++..|+|||.+.+. .++.++|+|||||++|||++ |..||
T Consensus 154 nili~----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~~g~~p~ 227 (283)
T cd05090 154 NILIG----EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYG--KFSSDSDIWSFGVVLWEIFSFGLQPY 227 (283)
T ss_pred eEEEc----CCCcEEeccccccccccCCcceecccCCCccceecChHHhccC--CCCchhhhHHHHHHHHHHHcCCCCCC
Confidence 99998 6678999999999754322 122334567789999998754 57899999999999999998 99999
Q ss_pred CCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1087 ANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1087 ~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.+.....+...+... .....+..+++.++++|.+||+.||.+||++.+|+++|..
T Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 228 YGFSNQEVIEMVRKR-QLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCHHHHHHHHHcC-CcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 887665555555433 3345677789999999999999999999999999998864
No 93
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1e-38 Score=345.67 Aligned_cols=246 Identities=24% Similarity=0.420 Sum_probs=202.7
Q ss_pred EEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||.||+++++ |..||||++++..... ......+..|..++..+ +||+|+++++++.+ .+.+|+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~~~~~l 73 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLI-----DDDVECTMVEKRVLALAWENPFLTHLYCTFQT--KEHLFF 73 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----cchHHHHHHHHHHHHhccCCCCccCeeEEEEe--CCEEEE
Confidence 46999999999999984 6679999998653211 11234556777787754 89999999999987 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+.+++|..++... ..+++..+..++.|++.||+|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 74 v~E~~~~g~L~~~i~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~----~~~~~kl~Dfg~~~~~~~ 148 (316)
T cd05620 74 VMEFLNGGDLMFHIQDK-GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD----RDGHIKIADFGMCKENVF 148 (316)
T ss_pred EECCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC----CCCCEEeCccCCCeeccc
Confidence 99999999999888654 3588999999999999999999999999999999999998 67789999999987422
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
........+||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+... .+.++..++++++
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 224 (316)
T cd05620 149 GDNRASTFCGTPDYIAPEILQGL--KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVD--TPHYPRWITKESK 224 (316)
T ss_pred CCCceeccCCCcCccCHHHHcCC--CCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC--CCCCCCCCCHHHH
Confidence 12223446799999999999854 5789999999999999999999999988777666666433 3456777899999
Q ss_pred HHHHHHhccCCCCCCCH-HHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSF-TEITNRLRV 1142 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSa-eELLe~Lr~ 1142 (1157)
+||.+||+.||.+||++ ++++++.+.
T Consensus 225 ~li~~~l~~dP~~R~~~~~~~~~h~~f 251 (316)
T cd05620 225 DILEKLFERDPTRRLGVVGNIRGHPFF 251 (316)
T ss_pred HHHHHHccCCHHHcCCChHHHHcCCCc
Confidence 99999999999999998 577766554
No 94
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.3e-38 Score=344.66 Aligned_cols=246 Identities=22% Similarity=0.409 Sum_probs=206.1
Q ss_pred EEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||+||+++++ +..||||++++..... ......+.+|..+++.+ +||||+++++++.. .+.+|+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~--~~~~~l 73 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQ-----DDDVECTMTEKRVLALAGKHPFLTQLHSCFQT--KDRLFF 73 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-----hhHHHHHHHHHHHHHhccCCCCccceeeEEEc--CCEEEE
Confidence 36999999999999984 5679999998653211 12245667888999888 79999999999887 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+.+++|..++.+.+ .+++..+..++.|++.||.|||+++|+||||||+|||++ .++.+||+|||++....
T Consensus 74 v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~----~~~~~kl~Dfg~~~~~~~ 148 (318)
T cd05570 74 VMEYVNGGDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD----SEGHIKIADFGMCKEGIL 148 (318)
T ss_pred EEcCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC----CCCcEEecccCCCeecCc
Confidence 999999999998886553 589999999999999999999999999999999999998 67799999999986532
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
........+||+.|+|||++.+. .++.++|+|||||++|+|++|+.||...........+..... .++..++++++
T Consensus 149 ~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 224 (318)
T cd05570 149 GGVTTSTFCGTPDYIAPEILSYQ--PYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV--RYPRWLSKEAK 224 (318)
T ss_pred CCCcccceecCccccCHHHhcCC--CCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCC--CCCCcCCHHHH
Confidence 22223345799999999999864 578899999999999999999999998877777666654433 45677899999
Q ss_pred HHHHHHhccCCCCCCCH-----HHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSF-----TEITNRLRV 1142 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSa-----eELLe~Lr~ 1142 (1157)
+||.+||..||.+||++ .+++++.+.
T Consensus 225 ~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~ 255 (318)
T cd05570 225 SILKSFLTKNPEKRLGCLPTGEQDIKGHPFF 255 (318)
T ss_pred HHHHHHccCCHHHcCCCCCCCHHHHhcCCCc
Confidence 99999999999999999 999987654
No 95
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.8e-38 Score=327.91 Aligned_cols=258 Identities=30% Similarity=0.556 Sum_probs=211.7
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEE--CCc----eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEe
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKW--RGT----DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFY 944 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~--kGt----~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLy 944 (1157)
++...+|++++.||+|+||+||+|++ ++. .||+|+++... .......+.+|+.+++.++||||++++
T Consensus 3 ~l~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~e~~~l~~~~~~~i~~~~ 75 (279)
T cd05109 3 ILKETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT-------SPKANKEILDEAYVMAGVGSPYVCRLL 75 (279)
T ss_pred ccchhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC-------CHHHHHHHHHHHHHHHhcCCCCCceEE
Confidence 46678999999999999999999987 344 37999886531 122245688899999999999999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
+++... ..+++|||+++|+|.+++......+++..++.++.|++.||+|||+++|+||||||+|||++ ..+.+
T Consensus 76 ~~~~~~---~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~----~~~~~ 148 (279)
T cd05109 76 GICLTS---TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK----SPNHV 148 (279)
T ss_pred EEEcCC---CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc----CCCcE
Confidence 998652 46789999999999999977666789999999999999999999999999999999999998 66789
Q ss_pred EEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhh
Q 001103 1025 KVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILS 1100 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~ 1100 (1157)
||+|||+++....... .....++..|+|||.+.+. .++.++|||||||+||||++ |..||...........+ .
T Consensus 149 kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~ 225 (279)
T cd05109 149 KITDFGLARLLDIDETEYHADGGKVPIKWMALESILHR--RFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL-E 225 (279)
T ss_pred EECCCCceeecccccceeecCCCccchhhCCHHHhccC--CCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH-H
Confidence 9999999976433221 1222356789999998754 57899999999999999998 99999877665554433 3
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1101 NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1101 ~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
.......+..++.++.++|.+||..||++||++.++++.|..+..
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~ 270 (279)
T cd05109 226 KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMAR 270 (279)
T ss_pred CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 344445566789999999999999999999999999998877654
No 96
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=9.7e-39 Score=345.64 Aligned_cols=246 Identities=25% Similarity=0.389 Sum_probs=201.6
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHH-HHHhCCCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAH-IISNLHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIk-ILK~L~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||+||++++ .|+.||||++.+..... ......+.+|.. +++.++||||+++++.+.. ....|+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~--~~~~~l 73 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK-----KKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--ADKLYF 73 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-----hhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe--CCEEEE
Confidence 3699999999999998 47789999997642211 111234445544 5688999999999999877 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN 1037 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~ 1037 (1157)
||||+.+++|..++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++.....
T Consensus 74 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~----~~~~~kl~Dfg~~~~~~~ 148 (323)
T cd05575 74 VLDYVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD----SQGHVVLTDFGLCKEGIE 148 (323)
T ss_pred EEcCCCCCCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC----CCCcEEEeccCCCccccc
Confidence 99999999999888654 4588999999999999999999999999999999999998 677999999999875322
Q ss_pred -CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1038 -TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1038 -~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+..... .++..+++.+.
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 224 (323)
T cd05575 149 HSKTTSTFCGTPEYLAPEVLRKQ--PYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPL--RLKPNISVSAR 224 (323)
T ss_pred CCCccccccCChhhcChhhhcCC--CCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCC--CCCCCCCHHHH
Confidence 2233446799999999999754 578899999999999999999999998877777776665433 35566899999
Q ss_pred HHHHHHhccCCCCCCCH----HHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSF----TEITNRLRV 1142 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSa----eELLe~Lr~ 1142 (1157)
+||.+||+.||.+||++ .+++++.+.
T Consensus 225 ~li~~~l~~~p~~R~~~~~~~~~il~~~~~ 254 (323)
T cd05575 225 HLLEGLLQKDRTKRLGAKDDFLEIKNHVFF 254 (323)
T ss_pred HHHHHHhhcCHHhCCCCCCCHHHHHcCCCc
Confidence 99999999999999987 577776553
No 97
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.4e-38 Score=333.78 Aligned_cols=246 Identities=22% Similarity=0.331 Sum_probs=200.1
Q ss_pred ecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEE
Q 001103 883 LGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTE 960 (1157)
Q Consensus 883 LGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVME 960 (1157)
||+|+||+||++++ +++.||+|++.+.... .......+..|+++++.++||||+++++++.. ...+++|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~~~~lv~e 73 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-----KRKGYEGAMVEKRILAKVHSRFIVSLAYAFQT--KTDLCLVMT 73 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh-----hhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcC--CCeEEEEEe
Confidence 79999999999987 4678999998764221 11223567789999999999999999999877 567999999
Q ss_pred eecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC
Q 001103 961 YMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN 1037 (1157)
Q Consensus 961 YmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~ 1037 (1157)
|+++|+|...+.. ....+++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++.....
T Consensus 74 ~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~----~~~~~~l~dfg~~~~~~~ 149 (280)
T cd05608 74 IMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD----NDGNVRISDLGLAVELKD 149 (280)
T ss_pred CCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC----CCCCEEEeeCccceecCC
Confidence 9999999877643 334589999999999999999999999999999999999998 677899999999875433
Q ss_pred C-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh----HHHHHhhhcCCCCCCCCCCc
Q 001103 1038 T-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG----AIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1038 ~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e----eil~~Il~~~lrpeip~~iS 1112 (1157)
. .......||+.|+|||++.+. .++.++|+|||||++|+|++|+.||...... .....+.. ....++..++
T Consensus 150 ~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 225 (280)
T cd05608 150 GQSKTKGYAGTPGFMAPELLQGE--EYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILN--DSVTYPDKFS 225 (280)
T ss_pred CCccccccCCCcCccCHHHhcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcc--cCCCCcccCC
Confidence 2 223345799999999999864 5788999999999999999999999865432 22222221 1234566789
Q ss_pred HHHHHHHHHHhccCCCCCC-----CHHHHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARP-----SFTEITNRLRVM 1143 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRP-----SaeELLe~Lr~L 1143 (1157)
+.+++|+.+||+.||.+|| ++++++++.|.-
T Consensus 226 ~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~ 261 (280)
T cd05608 226 PASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFR 261 (280)
T ss_pred HHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhh
Confidence 9999999999999999999 889999987763
No 98
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.5e-38 Score=328.58 Aligned_cols=254 Identities=33% Similarity=0.571 Sum_probs=207.6
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECC-------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEe
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRG-------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFY 944 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kG-------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLy 944 (1157)
+..++|++.+.||+|+||.||+|.+++ ..||||++.... . ......+.+|+.+++.++||||++++
T Consensus 3 ~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~----~---~~~~~~~~~e~~~l~~l~~~~iv~~~ 75 (277)
T cd05062 3 VAREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA----S---MRERIEFLNEASVMKEFNCHHVVRLL 75 (277)
T ss_pred ccHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC----C---HHHHHHHHHHHHHHHhCCCCCeeeEE
Confidence 455789999999999999999998743 459999875431 1 11235688999999999999999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhcccc---------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeec
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVN 1015 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd 1015 (1157)
+++.. ....++||||+.+++|.+++.+.. ..+++..++.++.|++.||.|||+++++||||||+|||++
T Consensus 76 ~~~~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~ 153 (277)
T cd05062 76 GVVSQ--GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA 153 (277)
T ss_pred EEEcC--CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc
Confidence 99876 567899999999999999886432 2356778899999999999999999999999999999998
Q ss_pred cCCCCCCeEEEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001103 1016 LRDPQRPICKVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHC 1091 (1157)
Q Consensus 1016 ~dd~e~g~VKLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~ 1091 (1157)
.++.+||+|||++........ .....++..|+|||++.+. .++.++|||||||++|||++ |..||.....
T Consensus 154 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~~~~p~~~~~~ 227 (277)
T cd05062 154 ----EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG--VFTTYSDVWSFGVVLWEIATLAEQPYQGMSN 227 (277)
T ss_pred ----CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcC--CcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 677899999999875332211 1123457789999998754 57899999999999999999 7999998877
Q ss_pred hHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1092 GAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1092 eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
......+..... ...+..++..+++||.+||+.+|.+|||+.++++.|+
T Consensus 228 ~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 228 EQVLRFVMEGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 766665554433 3456778999999999999999999999999999875
No 99
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=6.8e-38 Score=325.06 Aligned_cols=253 Identities=35% Similarity=0.611 Sum_probs=211.0
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
+...+|++.+.||+|+||.||++.++ ++.||||.++.... ..+.+.+|+.++++++||||+++++++..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~- 72 (261)
T cd05068 3 IDRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM---------DPKDFLAEAQIMKKLRHPKLIQLYAVCTL- 72 (261)
T ss_pred cchhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc---------cHHHHHHHHHHHHHCCCCCccceeEEEec-
Confidence 45568999999999999999999874 45699998875421 12557889999999999999999999877
Q ss_pred CCCcEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
.+..+++|||+.+++|.+++.... ..+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+||
T Consensus 73 -~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~----~~~~~~l~df 147 (261)
T cd05068 73 -EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG----ENNICKVADF 147 (261)
T ss_pred -CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc----CCCCEEECCc
Confidence 567899999999999999986543 5689999999999999999999999999999999999998 6778999999
Q ss_pred CCcccccCCccc--CCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCC
Q 001103 1030 GLSRIKCNTLVS--GGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1030 GLAkl~~~~~~s--ts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpe 1106 (1157)
|++......... .+...+..|+|||.+.+. .++.++|+||||+++|+|++ |+.||.+......+..+... ....
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~ 224 (261)
T cd05068 148 GLARVIKEDIYEAREGAKFPIKWTAPEAALYN--RFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQG-YRMP 224 (261)
T ss_pred ceEEEccCCcccccCCCcCceeccCccccccC--CCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC-CCCC
Confidence 998765432211 112234579999998754 57899999999999999999 99999988777666665433 3444
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.+..++..+.+++.+||+.+|.+||++.+|++.|+.
T Consensus 225 ~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 225 CPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 566788999999999999999999999999999875
No 100
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2e-38 Score=345.05 Aligned_cols=257 Identities=21% Similarity=0.331 Sum_probs=211.3
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||+||+++++ +..+|+|++.+.... .......+.+|+.++..++|++|+++++.+.+ .
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~ 73 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEML-----KRAETACFREERDVLVNGDNQWITTLHYAFQD--E 73 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHH-----HhhHHHHHHHHHHHHhhCCCCCEeeEEEEEec--C
Confidence 47899999999999999999985 556999998753211 12223557889999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|+||||+.+|+|.+++.+....+++..++.++.||+.||.|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~----~~~~~kL~DfG~a 149 (332)
T cd05623 74 NNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD----MNGHIRLADFGSC 149 (332)
T ss_pred CEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC----CCCCEEEeecchh
Confidence 689999999999999999987666789999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCC--cccCCCCCCCcccCcccccCC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCC
Q 001103 1033 RIKCNT--LVSGGVRGTLPWMAPELLNGS---NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1033 kl~~~~--~~sts~~GTp~YmAPEVL~G~---~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpei 1107 (1157)
...... ......+||+.|+|||++.+. ...++.++|||||||+||||++|+.||........+..+.....+..+
T Consensus 150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~ 229 (332)
T cd05623 150 LKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF 229 (332)
T ss_pred eecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccC
Confidence 753322 122335799999999998631 235788999999999999999999999988877777777655433333
Q ss_pred C---CCCcHHHHHHHHHHhccCCCC--CCCHHHHHHHHHH
Q 001103 1108 P---ERCDPEWRKLMEECWSFNPAA--RPSFTEITNRLRV 1142 (1157)
Q Consensus 1108 p---~~iSpeLrdLIkrCLqkDPsk--RPSaeELLe~Lr~ 1142 (1157)
+ ..+++++++||.+||..++.+ |+++.+++++.+.
T Consensus 230 p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f 269 (332)
T cd05623 230 PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFF 269 (332)
T ss_pred CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCc
Confidence 3 357999999999999765554 6899999999654
No 101
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=3.5e-38 Score=328.95 Aligned_cols=253 Identities=34% Similarity=0.585 Sum_probs=210.3
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEee
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYG 945 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLyg 945 (1157)
...+|.+++.||+|+||.||+|++. +..||||+++... .....+.+.+|+++++.++||||+++++
T Consensus 3 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 75 (280)
T cd05049 3 QRDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA-------SNDARKDFEREAELLTNFQHENIVKFYG 75 (280)
T ss_pred ChHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC-------CHHHHHHHHHHHHHHHhcCCCCchheee
Confidence 3457888999999999999999863 3569999886531 1123467889999999999999999999
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhcccc-------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccce
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKD-------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNL 1012 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~g-------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENI 1012 (1157)
++.. ....+++|||+++++|.+++...+ ..+++..++.++.|++.||.|||++||+||||||+||
T Consensus 76 ~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~ni 153 (280)
T cd05049 76 VCTE--GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNC 153 (280)
T ss_pred EEec--CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceE
Confidence 9987 568999999999999999986432 3478889999999999999999999999999999999
Q ss_pred eeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 001103 1013 LVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYAN 1088 (1157)
Q Consensus 1013 LLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g 1088 (1157)
|++ .++.+||+|||++....... ......+++.|+|||++.+. .++.++|||||||++|+|++ |+.||..
T Consensus 154 li~----~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~e~~~~g~~p~~~ 227 (280)
T cd05049 154 LVG----YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYR--KFTTESDVWSFGVVLWEIFTYGKQPWYG 227 (280)
T ss_pred EEc----CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccC--CcchhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 998 67899999999987532221 12233467889999999754 57899999999999999998 9999988
Q ss_pred CChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1089 MHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1089 ~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.........+..... ...+..++..+++||.+||+.||.+||++.++++.|.
T Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 228 LSNEEVIECITQGRL-LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCHHHHHHHHHcCCc-CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 877777666654433 3456678999999999999999999999999999875
No 102
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.7e-39 Score=366.99 Aligned_cols=256 Identities=25% Similarity=0.460 Sum_probs=226.7
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
+.|+.++++|+|+||.+++++++ ++.|++|.+.......+. .....+|+.+++++.|||||.+++.|.. +
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~------r~~A~~E~~lis~~~hP~iv~y~ds~~~--~ 75 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPE------RRSAIQEMDLLSKLLHPNIVEYKDSFEE--D 75 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchh------hHHHHHHHHHHHhccCCCeeeeccchhc--C
Confidence 57899999999999999988775 566999998876433321 2366789999999999999999999988 4
Q ss_pred Cc-EEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 953 GT-MATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 953 ~~-LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
++ ++|||+||+||+|.+.+++.. ..+++++++.++.||+.||.|||++.|+|||||+.|||++ .+..|||+|||
T Consensus 76 ~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt----k~~~VkLgDfG 151 (426)
T KOG0589|consen 76 GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT----KDKKVKLGDFG 151 (426)
T ss_pred CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc----ccCceeecchh
Confidence 45 999999999999999997754 7799999999999999999999999999999999999999 77788999999
Q ss_pred CcccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1031 LSRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1031 LAkl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
+|+...+.. ...+..||+.|++||++.+. +|..|+|||||||++|||++-+++|...+...++..|....+ .+++.
T Consensus 152 laK~l~~~~~~a~tvvGTp~YmcPEil~d~--pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~-~Plp~ 228 (426)
T KOG0589|consen 152 LAKILNPEDSLASTVVGTPYYMCPEILSDI--PYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLY-SPLPS 228 (426)
T ss_pred hhhhcCCchhhhheecCCCcccCHHHhCCC--CCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccC-CCCCc
Confidence 999887776 66678899999999999965 679999999999999999999999999999999888887664 56788
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
..+.+++.||+.||.++|..||++.+||.++..+..
T Consensus 229 ~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~ 264 (426)
T KOG0589|consen 229 MYSSELRSLVKSMLRKNPEHRPSALELLRRPHLLRY 264 (426)
T ss_pred cccHHHHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence 899999999999999999999999999998555443
No 103
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.2e-38 Score=332.52 Aligned_cols=259 Identities=34% Similarity=0.564 Sum_probs=210.4
Q ss_pred CCeeEEEEecccCcEEEEEEEECC--c--eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec
Q 001103 875 SDLEELQELGSGTFGTVYRGKWRG--T--DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPN 949 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~kG--t--~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~d 949 (1157)
++|++.+.||+|+||.||+|.++. . .+++|.++... .....+.+.+|++++.++ +||||+++++++..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 74 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA-------SENDHRDFAGELEVLCKLGHHPNIINLLGACEN 74 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC-------CHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc
Confidence 589999999999999999998743 2 36888776321 112245688999999999 79999999999877
Q ss_pred CCCCcEEEEEEeecCCcchhhhcccc---------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceee
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKD---------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLV 1014 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~g---------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILL 1014 (1157)
.+..+++|||+++++|.+++.+.. ..+++..++.++.|++.||+|||++||+||||||+|||+
T Consensus 75 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill 152 (297)
T cd05089 75 --RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLV 152 (297)
T ss_pred --CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEE
Confidence 567899999999999999986432 347889999999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhH
Q 001103 1015 NLRDPQRPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGA 1093 (1157)
Q Consensus 1015 d~dd~e~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~ee 1093 (1157)
+ .++.+||+|||++..............+..|+|||++.+. .++.++|||||||++|||++ |..||.......
T Consensus 153 ~----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~ 226 (297)
T cd05089 153 G----ENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYS--VYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAE 226 (297)
T ss_pred C----CCCeEEECCcCCCccccceeccCCCCcCccccCchhhccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHH
Confidence 8 6778999999998643222122222335679999998754 57899999999999999997 999999887776
Q ss_pred HHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHhh
Q 001103 1094 IIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQT 1149 (1157)
Q Consensus 1094 il~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLes 1149 (1157)
....+.. ......+..++..+++||.+||+.+|.+||+++++++.|..+....+.
T Consensus 227 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~~ 281 (297)
T cd05089 227 LYEKLPQ-GYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARKA 281 (297)
T ss_pred HHHHHhc-CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhcc
Confidence 6665543 334456677899999999999999999999999999999887765543
No 104
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=8.1e-38 Score=320.73 Aligned_cols=250 Identities=26% Similarity=0.469 Sum_probs=211.6
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||+|+||.||++.+ .+..|++|.+...... ......+.+|+++++.++||||+++++.+.+ .+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 72 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN------RREREEAIDEARVLAKLDSSYIIRYYESFLD--KG 72 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC------HHHHHHHHHHHHHHHhcCCCCeehheeeecc--CC
Confidence 578899999999999999988 4678999998754221 2234678899999999999999999999887 56
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++||||+++++|.+++... ...+++..++.++.|++.||.|||++||+|+||||+||+++ .++.+||+|||++
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~----~~~~~~l~df~~~ 148 (256)
T cd08529 73 KLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD----AYDNVKIGDLGVA 148 (256)
T ss_pred EEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe----CCCCEEEcccccc
Confidence 899999999999999998764 45689999999999999999999999999999999999998 6779999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
....... ......|++.|+|||++.+. .++.++|+|||||++|+|++|+.||...........+.... .+.++..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~ 225 (256)
T cd08529 149 KLLSDNTNFANTIVGTPYYLSPELCEDK--PYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGV-FPPVSQMY 225 (256)
T ss_pred eeccCccchhhccccCccccCHHHhcCC--CCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC-CCCCcccc
Confidence 7544322 23345689999999998754 46889999999999999999999998887666666655443 34456678
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
+++++++|.+||+.+|++||++.+++++.
T Consensus 226 ~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~ 254 (256)
T cd08529 226 SQQLAQLIDQCLTKDYRQRPDTFQLLRNP 254 (256)
T ss_pred CHHHHHHHHHHccCCcccCcCHHHHhhCC
Confidence 99999999999999999999999999864
No 105
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=2.2e-38 Score=345.16 Aligned_cols=257 Identities=21% Similarity=0.306 Sum_probs=210.6
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||+||+++++ ++.||+|++.+... ........+.+|..+++.++|++|+++++++.+ .
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~--~ 73 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEM-----LKRAETACFREERNVLVNGDCQWITTLHYAFQD--E 73 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHH-----HhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc--C
Confidence 47999999999999999999884 56799999876321 112224567889999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+..|+||||+.+|+|.+++.+....+++..+..++.|++.||+|||++||+||||||+|||++ ..+.+||+|||++
T Consensus 74 ~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~----~~~~~kl~DfG~a 149 (331)
T cd05624 74 NYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD----MNGHIRLADFGSC 149 (331)
T ss_pred CEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc----CCCCEEEEeccce
Confidence 689999999999999999987556789999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCcc--cCCCCCCCcccCcccccCCC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCC
Q 001103 1033 RIKCNTLV--SGGVRGTLPWMAPELLNGSN---NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1033 kl~~~~~~--sts~~GTp~YmAPEVL~G~~---~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpei 1107 (1157)
........ ....+||+.|+|||++.+.. ..++.++|||||||+||+|++|+.||........+..+.....+..+
T Consensus 150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~ 229 (331)
T cd05624 150 LKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF 229 (331)
T ss_pred eeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccC
Confidence 75433221 22356999999999986421 34688999999999999999999999988777777776654433333
Q ss_pred C---CCCcHHHHHHHHHHhccCCCC--CCCHHHHHHHHHH
Q 001103 1108 P---ERCDPEWRKLMEECWSFNPAA--RPSFTEITNRLRV 1142 (1157)
Q Consensus 1108 p---~~iSpeLrdLIkrCLqkDPsk--RPSaeELLe~Lr~ 1142 (1157)
+ ..+++++++||.+||..++.+ |+++++++++.+.
T Consensus 230 p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f 269 (331)
T cd05624 230 PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFF 269 (331)
T ss_pred CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCc
Confidence 3 346899999999999876655 4789999988653
No 106
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=8.8e-38 Score=359.60 Aligned_cols=248 Identities=21% Similarity=0.347 Sum_probs=208.7
Q ss_pred CCeeEEEEecccCcEEEEEEEEC---CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR---GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k---Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..|.+.+.||+|+||.||++... +..||+|.+... . ......+.+|+.+|+.++|||||++++++..
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~------~--~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-- 136 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN------D--ERQAAYARSELHCLAACDHFGIVKHFDDFKS-- 136 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC------C--HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE--
Confidence 34899999999999999999873 456888866432 1 1223567789999999999999999999987
Q ss_pred CCcEEEEEEeecCCcchhhhccc---cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 952 GGTMATVTEYMVNGSLRHVLARK---DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~---gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
.+.+||||||+++|+|.+++... ...+++..+..++.|++.||.|||+++|+||||||+|||++ ..+.+||+|
T Consensus 137 ~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~~~~~kL~D 212 (478)
T PTZ00267 137 DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM----PTGIIKLGD 212 (478)
T ss_pred CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC----CCCcEEEEe
Confidence 56899999999999999887542 34588999999999999999999999999999999999998 678999999
Q ss_pred cCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1029 FGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1029 FGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
||+++...... .....+||+.|+|||++.+. .++.++|||||||++|+|++|+.||........+..+......
T Consensus 213 Fgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~- 289 (478)
T PTZ00267 213 FGFSKQYSDSVSLDVASSFCGTPYYLAPELWERK--RYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYD- 289 (478)
T ss_pred CcCceecCCccccccccccCCCccccCHhHhCCC--CCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-
Confidence 99998643322 23456799999999999754 5789999999999999999999999988777777776655443
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
.++..+++++++||.+||..||++||++++++.+
T Consensus 290 ~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 290 PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 4566789999999999999999999999999875
No 107
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.4e-37 Score=321.25 Aligned_cols=251 Identities=36% Similarity=0.676 Sum_probs=213.8
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
+...+|++.+.||+|+||.||++...++.||+|.++.... ..+++.+|+.+++.++|+||+++++++.+
T Consensus 3 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-- 71 (256)
T cd05039 3 INSKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDST---------AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-- 71 (256)
T ss_pred cChhhccceeeeecCCCceEEEEEecCcEEEEEEeccchh---------HHHHHHHHHHHHHhcCCcceeeeEEEEcC--
Confidence 4457899999999999999999999999999999875421 24678899999999999999999999887
Q ss_pred CCcEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
....++||||+++++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 72 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~----~~~~~~l~d~g 147 (256)
T cd05039 72 GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS----EDLVAKVSDFG 147 (256)
T ss_pred CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe----CCCCEEEcccc
Confidence 567899999999999999987544 3689999999999999999999999999999999999998 67789999999
Q ss_pred CcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1031 LSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1031 LAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
++........ ...++..|+|||.+.+. .++.++|+||||+++|+|++ |..||...........+. .......+.
T Consensus 148 ~~~~~~~~~~--~~~~~~~~~ape~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~ 222 (256)
T cd05039 148 LAKEASQGQD--SGKLPVKWTAPEALREK--KFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVE-KGYRMEAPE 222 (256)
T ss_pred cccccccccc--cCCCcccccCchhhcCC--cCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-cCCCCCCcc
Confidence 9976533222 23356789999998743 57889999999999999997 999998877666555443 334455667
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.+++++.+||.+||..+|.+|||++++++.|..
T Consensus 223 ~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 223 GCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 789999999999999999999999999999864
No 108
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=1.2e-37 Score=329.67 Aligned_cols=258 Identities=34% Similarity=0.581 Sum_probs=214.7
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEe
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFY 944 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLy 944 (1157)
++..+|.+.+.||+|+||+||++... +..+|+|.+.... ......+.+|+.++++++||||++++
T Consensus 2 ~~~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~ 73 (288)
T cd05093 2 IKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS--------DNARKDFHREAELLTNLQHEHIVKFY 73 (288)
T ss_pred CchHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC--------HHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 45678999999999999999999752 2348888876431 22356788999999999999999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhcccc------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccce
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKD------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNL 1012 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~g------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENI 1012 (1157)
+++.. ....+++|||+++++|.+++...+ ..+++..++.++.|++.||+|||++||+||||||+||
T Consensus 74 ~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Ni 151 (288)
T cd05093 74 GVCVE--GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNC 151 (288)
T ss_pred EEEec--CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceE
Confidence 99877 568999999999999999886432 2489999999999999999999999999999999999
Q ss_pred eeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCC
Q 001103 1013 LVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYAN 1088 (1157)
Q Consensus 1013 LLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g 1088 (1157)
|++ .++.+||+|||++....... ......++..|+|||.+.+. .++.++|+|||||++|+|++ |..||..
T Consensus 152 li~----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~sDiwslG~il~~l~t~g~~p~~~ 225 (288)
T cd05093 152 LVG----ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR--KFTTESDVWSLGVVLWEIFTYGKQPWYQ 225 (288)
T ss_pred EEc----cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 998 67899999999987543221 12223457789999998754 57899999999999999998 9999988
Q ss_pred CChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1089 MHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1089 ~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
......+..+..... ...+..+++++.+|+.+||+.||.+|||+.++++.|+.+...
T Consensus 226 ~~~~~~~~~i~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 226 LSNNEVIECITQGRV-LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCHHHHHHHHHcCCc-CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 877777776665443 345567889999999999999999999999999999988764
No 109
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.6e-38 Score=344.00 Aligned_cols=254 Identities=23% Similarity=0.291 Sum_probs=202.1
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++++.||+|+||.||++.+ .+..||||++..... .......+.+|+.+++.++||||+++++++....
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 89 (355)
T cd07874 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ------NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK 89 (355)
T ss_pred hhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc------ChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc
Confidence 36899999999999999999987 467799999875421 1223466778999999999999999999886432
Q ss_pred ----CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 ----GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ----~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
....|+||||+.+ +|...+.. .+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+
T Consensus 90 ~~~~~~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~----~~~~~kl~ 161 (355)
T cd07874 90 SLEEFQDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK----SDCTLKIL 161 (355)
T ss_pred cccccceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC----CCCCEEEe
Confidence 2357999999976 56565542 378888999999999999999999999999999999998 67789999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC----
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL---- 1103 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l---- 1103 (1157)
|||+++............||+.|+|||++.+. .++.++|||||||++|+|++|+.||.+......+..+.....
T Consensus 162 Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (355)
T cd07874 162 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP 239 (355)
T ss_pred eCcccccCCCccccCCccccCCccCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99999876555444556799999999999764 578999999999999999999999987664433322211000
Q ss_pred -------------------------C-----------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1104 -------------------------R-----------PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1104 -------------------------r-----------peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
+ ...+...+.++++||.+||+.||++|||+.+++++.+.-
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~ 315 (355)
T cd07874 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPYIN 315 (355)
T ss_pred HHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcCcchh
Confidence 0 001122356789999999999999999999999997663
No 110
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-40 Score=351.03 Aligned_cols=260 Identities=23% Similarity=0.356 Sum_probs=227.7
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
..++|++.+.||+|.|+.|+++.+ .|+++|+|++....+..+. .+++.+|++|-+.|+|||||++++.+..
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~------~e~l~rEarIC~~LqHP~IvrL~~ti~~- 81 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARD------FQKLEREARICRKLQHPNIVRLHDSIQE- 81 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhcccc------HHHHHHHHHHHHhcCCCcEeehhhhhcc-
Confidence 346788889999999999999876 5888999998877655442 4678899999999999999999999877
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
.++.|||+|+|.|++|-.-+-+. ..+++..+-.++.||+.+|.|+|.+||||||+||+|+|+..++ ...-+||+|||
T Consensus 82 -~~~~ylvFe~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~-~~A~vKL~~FG 158 (355)
T KOG0033|consen 82 -ESFHYLVFDLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKA-KGAAVKLADFG 158 (355)
T ss_pred -cceeEEEEecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeecc-CCCceeecccc
Confidence 67999999999999996544332 4578888999999999999999999999999999999997554 56679999999
Q ss_pred CcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC--CCCC
Q 001103 1031 LSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR--PQIP 1108 (1157)
Q Consensus 1031 LAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr--peip 1108 (1157)
+|..........+++|||.|||||++.. .+|+..+|||+-|||||-||.|.+||.+.....++++|+.+.+. ++..
T Consensus 159 vAi~l~~g~~~~G~~GtP~fmaPEvvrk--dpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w 236 (355)
T KOG0033|consen 159 LAIEVNDGEAWHGFAGTPGYLSPEVLKK--DPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEW 236 (355)
T ss_pred eEEEeCCccccccccCCCcccCHHHhhc--CCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCccc
Confidence 9998888888889999999999999984 47899999999999999999999999999999999999887654 3345
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
..++++.++||++||..||++|.|+.+.|+|.|...
T Consensus 237 ~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~ 272 (355)
T KOG0033|consen 237 DTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICN 272 (355)
T ss_pred CcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcc
Confidence 678999999999999999999999999999988653
No 111
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=8.2e-38 Score=324.29 Aligned_cols=249 Identities=37% Similarity=0.647 Sum_probs=207.9
Q ss_pred CCCeeEEEEecccCcEEEEEEEECC-ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWRG-TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~kG-t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..+|++.+.||+|+||.||++++++ ..+|+|++.+.... ...+.+|+++++.++||||+++++++.. .
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~---------~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 71 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS---------EDDFIEEAKVMMKLSHPNLVQLYGVCTK--Q 71 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC---------HHHHHHHHHHHHhCCCCCEEEEEEEEcC--C
Confidence 3578899999999999999998854 46999988653211 2457789999999999999999999876 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+++++|.+++......+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~----~~~~~kl~dfg~~ 147 (256)
T cd05059 72 RPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG----EDNVVKVSDFGLA 147 (256)
T ss_pred CceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC----CCCcEEECCcccc
Confidence 688999999999999999976555789999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCccc--CCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1033 RIKCNTLVS--GGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1033 kl~~~~~~s--ts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
+...+.... ....++..|+|||.+.+. .++.++|+||||+++|+|++ |+.||......+....+. ...+...+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~ 224 (256)
T cd05059 148 RYVLDDQYTSSQGTKFPVKWAPPEVFDYS--RFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVS-AGYRLYRPK 224 (256)
T ss_pred eecccccccccCCCCCCccccCHHHhccC--CCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHH-cCCcCCCCC
Confidence 754432221 112244579999998754 57889999999999999999 899998777666665554 344455667
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
.+++++.+|+.+||..+|.+|||+.++++.|
T Consensus 225 ~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 225 LAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 7899999999999999999999999999876
No 112
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4.7e-38 Score=341.47 Aligned_cols=250 Identities=20% Similarity=0.351 Sum_probs=207.2
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~~ 952 (1157)
+|++.+.||+|+||+||+++++ +..||||++++..... ....+.+..|..+++.+. |++|+++++++.+ .
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~--~ 73 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQ-----DDDVECTMVEKRVLALQDKPPFLTQLHSCFQT--V 73 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----hhHHHHHHHHHHHHHhccCCCchhheeeEEec--C
Confidence 4788999999999999999884 6779999998642211 122356678888888885 5778889988877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|+||||+++|+|.+++.+.+ .+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~~lv~Ey~~~g~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~----~~~~ikL~Dfg~~ 148 (323)
T cd05615 74 DRLYFVMEYVNGGDLMYHIQQVG-KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD----SEGHIKIADFGMC 148 (323)
T ss_pred CEEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC----CCCCEEEeccccc
Confidence 68999999999999999886544 488999999999999999999999999999999999998 6778999999998
Q ss_pred ccccC-CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCN-TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~-~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
..... .......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+..... .++..+
T Consensus 149 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~--~~p~~~ 224 (323)
T cd05615 149 KEHMVDGVTTRTFCGTPDYIAPEIIAYQ--PYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNV--SYPKSL 224 (323)
T ss_pred cccCCCCccccCccCCccccCHHHHcCC--CCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC--CCCccC
Confidence 75322 2223446799999999999754 578899999999999999999999998888777777765443 466778
Q ss_pred cHHHHHHHHHHhccCCCCCCC-----HHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPS-----FTEITNRLR 1141 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPS-----aeELLe~Lr 1141 (1157)
++++.+|+.+||+++|.+|++ ..+++++.+
T Consensus 225 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~ 259 (323)
T cd05615 225 SKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAF 259 (323)
T ss_pred CHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcc
Confidence 999999999999999999997 466776643
No 113
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=4.6e-38 Score=344.96 Aligned_cols=262 Identities=30% Similarity=0.510 Sum_probs=213.0
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCcee
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVV 941 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIV 941 (1157)
|.+...+|++++.||+|+||.||+|.+. ++.||+|+++.... ....+.+.+|+.+++++ +||||+
T Consensus 2 ~~~~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~-------~~~~~~~~~E~~~~~~l~~h~niv 74 (337)
T cd05054 2 WEFPRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGAT-------ASEYKALMTELKILIHIGHHLNVV 74 (337)
T ss_pred cccCHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCC-------HHHHHHHHHHHHHHHhhccCcchh
Confidence 3455678999999999999999999753 35699998864311 11235677899999999 899999
Q ss_pred EEeeeeecCCCCcEEEEEEeecCCcchhhhcccc----------------------------------------------
Q 001103 942 AFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------------------------------------- 975 (1157)
Q Consensus 942 kLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------------------------------------- 975 (1157)
++++++... ...++++|||+.+++|.+++....
T Consensus 75 ~~~~~~~~~-~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (337)
T cd05054 75 NLLGACTKP-GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSL 153 (337)
T ss_pred heeeeEecC-CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcch
Confidence 999988653 567899999999999998875321
Q ss_pred --------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCc--
Q 001103 976 --------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL-- 1039 (1157)
Q Consensus 976 --------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~-- 1039 (1157)
..+++..+..++.|++.||+|||+++|+||||||+|||++ .++.+||+|||++.......
T Consensus 154 ~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~----~~~~vkL~DfG~a~~~~~~~~~ 229 (337)
T cd05054 154 SDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS----ENNVVKICDFGLARDIYKDPDY 229 (337)
T ss_pred hhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe----CCCcEEEeccccchhcccCcch
Confidence 2578899999999999999999999999999999999998 66789999999997543221
Q ss_pred -ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHH
Q 001103 1040 -VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRK 1117 (1157)
Q Consensus 1040 -~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrd 1117 (1157)
......++..|+|||++.+. .++.++|||||||+||||++ |..||.+....+.+...+........+...++++.+
T Consensus 230 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (337)
T cd05054 230 VRKGDARLPLKWMAPESIFDK--VYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMRAPEYATPEIYS 307 (337)
T ss_pred hhccCCCCCccccCcHHhcCC--CCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCCCCccCCHHHHH
Confidence 12223467789999998754 67899999999999999998 999998765545454455555555667778899999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1118 LMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1118 LIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
++.+||+.+|++||++.+++++|..+..
T Consensus 308 l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 308 IMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 9999999999999999999999998764
No 114
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6.2e-38 Score=344.64 Aligned_cols=254 Identities=23% Similarity=0.291 Sum_probs=203.2
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++++.||+|+||.||++.+ .++.||||++..... .......+.+|+.+++.++||||+++++++....
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~ 96 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ------NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK 96 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc------CchhHHHHHHHHHHHHhcCCCCccccceeecccc
Confidence 36899999999999999999987 467799999875421 1122356778999999999999999999876432
Q ss_pred ----CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 ----GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ----~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
...+|+||||+.+ +|...+.. .+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+
T Consensus 97 ~~~~~~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~----~~~~~kL~ 168 (364)
T cd07875 97 SLEEFQDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK----SDCTLKIL 168 (364)
T ss_pred cccccCeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC----CCCcEEEE
Confidence 2357999999976 66666642 377888999999999999999999999999999999998 67799999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC---
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR--- 1104 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr--- 1104 (1157)
|||+++............||..|+|||++.+. .++.++|||||||+||+|++|+.||.+......+..++.....
T Consensus 169 DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~--~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~ 246 (364)
T cd07875 169 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCP 246 (364)
T ss_pred eCCCccccCCCCcccCCcccCCcCCHHHHhCC--CCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999876555444556799999999999864 5789999999999999999999999877655544433221000
Q ss_pred -------------------------------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1105 -------------------------------------PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1105 -------------------------------------peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.......+.++++||.+||+.||.+|||+.+++++.|.-
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccc
Confidence 001112346789999999999999999999999998763
No 115
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1e-37 Score=317.85 Aligned_cols=245 Identities=38% Similarity=0.665 Sum_probs=209.8
Q ss_pred EEecccCcEEEEEEEEC-----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcE
Q 001103 881 QELGSGTFGTVYRGKWR-----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k-----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~L 955 (1157)
+.||+|+||.||++.+. +..||+|+++.... ......+.+|+++++.++|+||+++++++.. ....
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~~ 71 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS-------EEERKDFLKEARVMKKLGHPNVVRLLGVCTE--EEPL 71 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc-------hhHHHHHHHHHHHHhhcCCCChheeeeeecC--CCce
Confidence 36999999999999885 66799999876421 1135678899999999999999999999887 6789
Q ss_pred EEEEEeecCCcchhhhccc--------cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 956 ATVTEYMVNGSLRHVLARK--------DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~--------gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
+++|||+++++|.+++... ...+++..++.++.|++.||+|||+++|+||||||+|||++ .++.+||+
T Consensus 72 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~----~~~~~~l~ 147 (262)
T cd00192 72 YLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG----EDLVVKIS 147 (262)
T ss_pred EEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC----CCCcEEEc
Confidence 9999999999999999775 46799999999999999999999999999999999999998 66899999
Q ss_pred ecCCcccccCC---cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCC
Q 001103 1028 DFGLSRIKCNT---LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTL 1103 (1157)
Q Consensus 1028 DFGLAkl~~~~---~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~l 1103 (1157)
|||.+...... .......++..|+|||.+.+. .++.++|+||||+++|+|++ |..||...........+.. ..
T Consensus 148 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~ 224 (262)
T cd00192 148 DFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDG--IFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK-GY 224 (262)
T ss_pred ccccccccccccccccccCCCcCccccCHHHhccC--CcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CC
Confidence 99999865432 223345688999999998754 57899999999999999999 6999998877766666654 44
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1104 RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1104 rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
....+..+++++.+++.+||+.+|.+|||+.+++++|.
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 225 RLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred CCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 55667788999999999999999999999999999873
No 116
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1e-37 Score=324.97 Aligned_cols=254 Identities=33% Similarity=0.591 Sum_probs=210.0
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECC-------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEe
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRG-------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFY 944 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kG-------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLy 944 (1157)
+...+|++.+.||+|+||.||++.+++ ..||+|.+.... .......+.+|+.+++.++||||++++
T Consensus 3 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-------~~~~~~~~~~e~~~l~~~~~~~i~~~~ 75 (277)
T cd05032 3 LPREKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-------SMRERIEFLNEASVMKEFNCHHVVRLL 75 (277)
T ss_pred cchHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-------CHHHHHHHHHHHHHHHhCCCCceeEEE
Confidence 455789999999999999999998743 459999876431 112235678899999999999999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhcccc---------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeec
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVN 1015 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd 1015 (1157)
+++.. ....++||||+.+++|.+++.... ..+++..++.++.|++.||.|||+++|+||||||+|||++
T Consensus 76 ~~~~~--~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~ 153 (277)
T cd05032 76 GVVST--GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA 153 (277)
T ss_pred EEEcC--CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc
Confidence 99887 568899999999999999886422 2367888999999999999999999999999999999998
Q ss_pred cCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001103 1016 LRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHC 1091 (1157)
Q Consensus 1016 ~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~ 1091 (1157)
.++.+||+|||+++...... ......++..|+|||.+.+. .++.++|||||||++|||++ |+.||.....
T Consensus 154 ----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 227 (277)
T cd05032 154 ----EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG--VFTTKSDVWSFGVVLWEMATLAEQPYQGLSN 227 (277)
T ss_pred ----CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcC--CCCcccchHHHHHHHHHhhccCCCCCccCCH
Confidence 67899999999987543322 12234567899999998743 57889999999999999998 9999988777
Q ss_pred hHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1092 GAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1092 eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
......+. .......+..++.++.+||.+||+.+|.+|||+.++++.|.
T Consensus 228 ~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 228 EEVLKFVI-DGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 76666665 33345567778999999999999999999999999999874
No 117
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.2e-38 Score=342.30 Aligned_cols=245 Identities=25% Similarity=0.419 Sum_probs=201.3
Q ss_pred EEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHh-CCCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISN-LHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~-L~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||+||+|+++ +..||||++++..... +.....+..|..+++. ++||||+++++++.+ ...+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-----~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~--~~~~~l 73 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLM-----DDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT--KENLFF 73 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhh-----cchHHHHHHHHHHHHhccCCCcCcceEEEEEe--CCEEEE
Confidence 36999999999999985 5679999998653211 1113445667777776 489999999999987 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+++|+|..++.+. ..+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 74 v~ey~~~g~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~----~~~~~kl~Dfg~~~~~~~ 148 (316)
T cd05619 74 VMEYLNGGDLMFHIQSC-HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD----TDGHIKIADFGMCKENML 148 (316)
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC----CCCCEEEccCCcceECCC
Confidence 99999999999988654 3588899999999999999999999999999999999998 67789999999987432
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
.........||+.|+|||++.+. .++.++|||||||++|+|++|+.||...........+.... +.++..++.+++
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~ 224 (316)
T cd05619 149 GDAKTCTFCGTPDYIAPEILLGQ--KYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDN--PCYPRWLTREAK 224 (316)
T ss_pred CCCceeeecCCccccCHHHHcCC--CCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC--CCCCccCCHHHH
Confidence 22223346799999999999754 57899999999999999999999999887776666654332 345667899999
Q ss_pred HHHHHHhccCCCCCCCHH-HHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSFT-EITNRLR 1141 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSae-ELLe~Lr 1141 (1157)
+||.+||+.||.+||++. +++++.+
T Consensus 225 ~li~~~l~~~P~~R~~~~~~l~~h~~ 250 (316)
T cd05619 225 DILVKLFVREPERRLGVKGDIRQHPF 250 (316)
T ss_pred HHHHHHhccCHhhcCCChHHHHcCcc
Confidence 999999999999999996 7777644
No 118
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.9e-38 Score=327.19 Aligned_cols=253 Identities=25% Similarity=0.368 Sum_probs=204.1
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
...+|++++.||+|+||.||+|++ .+..||+|++..... .....+.+|+.++++++||||+++++.+..
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--------~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~- 77 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--------DDFSLIQQEIFMVKECKHCNIVAYFGSYLS- 77 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--------chHHHHHHHHHHHHhcCCCCeeeeeEEEEe-
Confidence 346899999999999999999997 467799999875311 112457789999999999999999999877
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
....++||||+++++|.+++.+. ..+++..+..++.|++.||.|||+++|+||||||+|||++ ..+.+||+|||
T Consensus 78 -~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~----~~~~~~l~dfg 151 (267)
T cd06646 78 -REKLWICMEYCGGGSLQDIYHVT-GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT----DNGDVKLADFG 151 (267)
T ss_pred -CCEEEEEEeCCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC----CCCCEEECcCc
Confidence 56889999999999999988654 3588999999999999999999999999999999999998 67789999999
Q ss_pred CcccccCCc-ccCCCCCCCcccCcccccCC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCC--
Q 001103 1031 LSRIKCNTL-VSGGVRGTLPWMAPELLNGS-NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQ-- 1106 (1157)
Q Consensus 1031 LAkl~~~~~-~sts~~GTp~YmAPEVL~G~-~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpe-- 1106 (1157)
++....... ......|+..|+|||.+.+. ...++.++|+|||||++|+|++|+.||...........+....+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 231 (267)
T cd06646 152 VAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKL 231 (267)
T ss_pred cceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCC
Confidence 987543222 22345689999999988532 23467899999999999999999999976554433333222222221
Q ss_pred -CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1107 -IPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1107 -ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
....++..+++||.+||+.+|++||++++++++|
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 232 KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 1234688999999999999999999999999876
No 119
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=1.6e-37 Score=317.88 Aligned_cols=252 Identities=25% Similarity=0.413 Sum_probs=212.5
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++++.||.|+||.||++.+ .+..+|+|++...... ....+.+.+|+++++.++||||+++++.+......
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT------EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQ 74 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC------HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCC
Confidence 588999999999999999987 4677999988754221 22246788899999999999999999988765567
Q ss_pred cEEEEEEeecCCcchhhhccc---cccccHHHHHHHHHHHHHHHHHHH-----HCCceeccCCccceeeccCCCCCCeEE
Q 001103 954 TMATVTEYMVNGSLRHVLARK---DRILDRRKKLMLMMDAAFGMEYLH-----MKNIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~---gr~L~e~qVlkIa~QLa~ALeYLH-----SkGIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
.++++|||+++++|.+++... ...+++..++.++.||+.||.||| +.+|+|+||||+|||++ ..+.+|
T Consensus 75 ~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~----~~~~~k 150 (265)
T cd08217 75 TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD----ANNNVK 150 (265)
T ss_pred EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe----cCCCEE
Confidence 889999999999999998653 456899999999999999999999 88999999999999998 678999
Q ss_pred EEecCCcccccCCcc-cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC
Q 001103 1026 VGDFGLSRIKCNTLV-SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR 1104 (1157)
Q Consensus 1026 LiDFGLAkl~~~~~~-sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr 1104 (1157)
|+|||++........ .....+++.|+|||++.+. .++.++|+||||+++|+|++|+.||...........+... ..
T Consensus 151 l~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~ 227 (265)
T cd08217 151 LGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHM--SYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEG-KF 227 (265)
T ss_pred EecccccccccCCcccccccccCCCccChhhhcCC--CCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcC-CC
Confidence 999999886544332 3345789999999998754 4788999999999999999999999987765555555443 33
Q ss_pred CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1105 PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1105 peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
+.++..++..+.+++.+||+.+|.+||++++|+++.
T Consensus 228 ~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~ 263 (265)
T cd08217 228 RRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLP 263 (265)
T ss_pred CCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCC
Confidence 456778899999999999999999999999999874
No 120
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.4e-38 Score=325.03 Aligned_cols=251 Identities=33% Similarity=0.596 Sum_probs=212.2
Q ss_pred CCeeEEEEecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.+|+++++||.|+||.||+|++. +..+|+|++..... .....+.+|+.+++.++||||+++++++.+ ..
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~--------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~ 75 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL--------LKQQDFQKEVQALKRLRHKHLISLFAVCSV--GE 75 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch--------hhHHHHHHHHHHHhcCCCcchhheeeeEec--CC
Confidence 57889999999999999999985 56799999875421 123567889999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++||||+++++|.+++.+. +..+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~----~~~~~kl~d~g~~ 151 (261)
T cd05148 76 PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG----EDLVCKVADFGLA 151 (261)
T ss_pred CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc----CCceEEEccccch
Confidence 789999999999999999763 45689999999999999999999999999999999999998 6779999999998
Q ss_pred ccccCCcc-cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCC
Q 001103 1033 RIKCNTLV-SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPER 1110 (1157)
Q Consensus 1033 kl~~~~~~-sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~ 1110 (1157)
........ .....++..|+|||.+.+. .++.++||||||+++|+|++ |+.||......+.+..+.. ..+...+..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~ 228 (261)
T cd05148 152 RLIKEDVYLSSDKKIPYKWTAPEAASHG--TFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITA-GYRMPCPAK 228 (261)
T ss_pred hhcCCccccccCCCCceEecCHHHHccC--CCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHh-CCcCCCCCC
Confidence 76433221 2233467789999998753 57889999999999999998 8999988877776666653 345566778
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+++.+.++|.+||+.||.+|||+.+|++.|..
T Consensus 229 ~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 229 CPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 89999999999999999999999999999875
No 121
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.3e-37 Score=320.80 Aligned_cols=245 Identities=34% Similarity=0.619 Sum_probs=201.9
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATV 958 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLV 958 (1157)
+.||+|+||.||++++ .++.||+|.+.... .......+.+|+++++.++||||+++++++.. ....++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv 71 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL-------PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--KQPIYIV 71 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccC-------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC--CCCeEEE
Confidence 3699999999999988 57789999876431 12234678899999999999999999999877 5688999
Q ss_pred EEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCC
Q 001103 959 TEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNT 1038 (1157)
Q Consensus 959 MEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~ 1038 (1157)
|||+.+++|.+++.+.+..+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++......
T Consensus 72 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~----~~~~~kl~dfg~~~~~~~~ 147 (252)
T cd05084 72 MELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT----EKNVLKISDFGMSREEEDG 147 (252)
T ss_pred EeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc----CCCcEEECccccCcccccc
Confidence 999999999999976666689999999999999999999999999999999999998 6678999999998754332
Q ss_pred ccc---CCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHH
Q 001103 1039 LVS---GGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPERCDPE 1114 (1157)
Q Consensus 1039 ~~s---ts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpe 1114 (1157)
... ....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...........+. ...+...+..++..
T Consensus 148 ~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 224 (252)
T cd05084 148 VYASTGGMKQIPVKWTAPEALNYG--RYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIE-QGVRLPCPELCPDA 224 (252)
T ss_pred cccccCCCCCCceeecCchhhcCC--CCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHH-cCCCCCCcccCCHH
Confidence 111 111234569999998754 47889999999999999997 999998776655444443 33444567778999
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1115 WRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1115 LrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+.+|+.+||+.+|.+|||+.++++.|.
T Consensus 225 ~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 999999999999999999999998875
No 122
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.6e-38 Score=329.24 Aligned_cols=247 Identities=35% Similarity=0.646 Sum_probs=203.2
Q ss_pred eEEEEecccCcEEEEEEEEC------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 878 EELQELGSGTFGTVYRGKWR------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 878 eILrkLGsGsFGtVYlAr~k------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
.+.+.||.|+||.||+|.++ +..|+||.++... .....+.+.+|++++++++||||+++++++..
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~-------~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-- 72 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSS-------SEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-- 72 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTS-------SHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES--
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecccc-------ccccceeeeecccccccccccccccccccccc--
Confidence 46789999999999999997 5669999985421 12225788999999999999999999999985
Q ss_pred CCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
.+.+++||||+++|+|.++|... ...+++..++.++.|++.||.|||+++|+|++|++.|||++ .++.+||+|||
T Consensus 73 ~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~----~~~~~Kl~~f~ 148 (259)
T PF07714_consen 73 NEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD----SNGQVKLSDFG 148 (259)
T ss_dssp SSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE----TTTEEEEESTT
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc----ccccccccccc
Confidence 45699999999999999999876 56799999999999999999999999999999999999999 78899999999
Q ss_pred CcccccCC---cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCC
Q 001103 1031 LSRIKCNT---LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1031 LAkl~~~~---~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpe 1106 (1157)
++...... .......+...|+|||.+.+. .++.++||||||+++|||++ |+.||...........+. ...+..
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~-~~~~~~ 225 (259)
T PF07714_consen 149 LSRPISEKSKYKNDSSQQLPLRYLAPEVLKDG--EYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLK-QGQRLP 225 (259)
T ss_dssp TGEETTTSSSEEESTTSESGGGGS-HHHHHHS--EESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHH-TTEETT
T ss_pred cccccccccccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccc-ccccce
Confidence 99765221 122334577789999999754 47999999999999999999 789999988777777774 444456
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
.+..++..+.++|.+||..||.+|||+.+|++.|
T Consensus 226 ~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 226 IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred eccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 7778999999999999999999999999999876
No 123
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2e-38 Score=342.36 Aligned_cols=245 Identities=24% Similarity=0.358 Sum_probs=199.4
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHH-HHHHhCCCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREA-HIISNLHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEI-kILK~L~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||.||++++ .+..||+|++.+..... ......+.+|. .+++.++||||+++++.+.+ .+..|+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~--~~~~~l 73 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILK-----KKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT--AEKLYF 73 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHH-----hhHHHHHHHHHHHHHHhCCCCCccceeeEEEc--CCEEEE
Confidence 3699999999999998 46779999998643211 11123444554 46788999999999999877 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN 1037 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~ 1037 (1157)
||||+++++|...+.+. ..+++..+..++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++....
T Consensus 74 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~----~~~~~kl~Dfg~~~~~~~ 148 (321)
T cd05603 74 VLDYVNGGELFFHLQRE-RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD----SQGHVVLTDFGLCKEGVE 148 (321)
T ss_pred EEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC----CCCCEEEccCCCCccCCC
Confidence 99999999998887653 4578889999999999999999999999999999999998 677999999999875322
Q ss_pred -CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1038 -TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1038 -~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
.......+||+.|+|||++.+. .++.++|||||||++|+|++|+.||...+.......+.... ..++...+.++.
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~--~~~~~~~~~~~~ 224 (321)
T cd05603 149 PEETTSTFCGTPEYLAPEVLRKE--PYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKP--LQLPGGKTVAAC 224 (321)
T ss_pred CCCccccccCCcccCCHHHhcCC--CCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCC--CCCCCCCCHHHH
Confidence 2233446799999999999754 57889999999999999999999999887766666665443 356677889999
Q ss_pred HHHHHHhccCCCCCCCH----HHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSF----TEITNRLR 1141 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSa----eELLe~Lr 1141 (1157)
++|.+||++||.+||++ .+++++.+
T Consensus 225 ~li~~~l~~~p~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05603 225 DLLVGLLHKDQRRRLGAKADFLEIKNHVF 253 (321)
T ss_pred HHHHHHccCCHhhcCCCCCCHHHHhCCCC
Confidence 99999999999999865 46666554
No 124
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=2.5e-38 Score=342.74 Aligned_cols=245 Identities=24% Similarity=0.379 Sum_probs=198.7
Q ss_pred EEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHH-HHHHHhCCCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWRE-AHIISNLHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrE-IkILK~L~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||+||++++. +..||+|++.+...... . ....+.+| ..+++.++||||+++++++.. .+.+|+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~----~-~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~--~~~~~l 73 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKK----K-EEKHIMSERNVLLKNVKHPFLVGLHFSFQT--ADKLYF 73 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhh----h-HHHHHHHHHHHHHHhCCCCCCCceeEEEEc--CCeEEE
Confidence 36999999999999984 56699999986422111 1 12233344 445788999999999999887 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+.+++|.+++.+.. .+.+..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 74 v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~----~~~~~kl~DfG~a~~~~~ 148 (325)
T cd05602 74 VLDYINGGELFYHLQRER-CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD----SQGHIVLTDFGLCKENIE 148 (325)
T ss_pred EEeCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC----CCCCEEEccCCCCccccc
Confidence 999999999999887543 477888899999999999999999999999999999998 67799999999987532
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
........+||+.|+|||++.+. .++.++|||||||++|+|++|++||......+.+..+..... .++..+++.+.
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~--~~~~~~~~~~~ 224 (325)
T cd05602 149 HNGTTSTFCGTPEYLAPEVLHKQ--PYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPL--QLKPNITNSAR 224 (325)
T ss_pred CCCCcccccCCccccCHHHHcCC--CCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCc--CCCCCCCHHHH
Confidence 22233456799999999999864 578899999999999999999999998887777776655433 35567899999
Q ss_pred HHHHHHhccCCCCCCCHH----HHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSFT----EITNRLR 1141 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSae----ELLe~Lr 1141 (1157)
++|.+||+.||.+||++. +++++++
T Consensus 225 ~li~~~l~~~p~~R~~~~~~~~~i~~~~~ 253 (325)
T cd05602 225 HLLEGLLQKDRTKRLGAKDDFMEIKNHIF 253 (325)
T ss_pred HHHHHHcccCHHHCCCCCCCHHHHhcCcc
Confidence 999999999999999876 5665543
No 125
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.3e-37 Score=330.05 Aligned_cols=256 Identities=21% Similarity=0.290 Sum_probs=208.7
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|+..+.||+|+||+||++.+. ++.||+|++...... .......+.+|+++++.++|++|+++++.+.. ..
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~ 73 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK-----KRKGESMALNEKQILEKVNSQFVVNLAYAYET--KD 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh-----hhhHHHHHHHHHHHHHHcCCcCceeEEEEEec--CC
Confidence 3678899999999999999884 678999998764221 11223557789999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+++|||+.+++|..++... ...+++..+..++.|++.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~----~~~~~kl~Dfg~~ 149 (285)
T cd05632 74 ALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD----DYGHIRISDLGLA 149 (285)
T ss_pred EEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC----CCCCEEEecCCcc
Confidence 899999999999998887653 34589999999999999999999999999999999999998 6678999999998
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc--CCCCCCCCC
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN--TLRPQIPER 1110 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~--~lrpeip~~ 1110 (1157)
.............|+..|+|||++.+. .++.++|+|||||++|+|++|..||...........+... .....++..
T Consensus 150 ~~~~~~~~~~~~~g~~~~~aPE~~~~~--~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (285)
T cd05632 150 VKIPEGESIRGRVGTVGYMAPEVLNNQ--RYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAK 227 (285)
T ss_pred eecCCCCcccCCCCCcCccChHHhcCC--CCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCcc
Confidence 754433333445799999999999754 5788999999999999999999999876654333333221 122345667
Q ss_pred CcHHHHHHHHHHhccCCCCCCC-----HHHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPS-----FTEITNRLRVMS 1144 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPS-----aeELLe~Lr~Lk 1144 (1157)
+++++.+|+..||+.||.+||+ +++++++.+.-.
T Consensus 228 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~ 266 (285)
T cd05632 228 FSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRN 266 (285)
T ss_pred CCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhc
Confidence 8899999999999999999999 889999866543
No 126
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.5e-37 Score=360.77 Aligned_cols=255 Identities=24% Similarity=0.366 Sum_probs=213.6
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++.+.||+|+||+||++++ .++.||||++...... +.....+.+|+.++..++|+||++++..+....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~------~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS------EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC------HHHHHHHHHHHHHHhcCCCCcEEEeecceeccc
Confidence 46899999999999999999987 5788999998765221 222456788999999999999999988775422
Q ss_pred C------CcEEEEEEeecCCcchhhhccc---cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCC
Q 001103 952 G------GTMATVTEYMVNGSLRHVLARK---DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRP 1022 (1157)
Q Consensus 952 ~------~~LyLVMEYmeGGSL~dlLkr~---gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g 1022 (1157)
. ..+++||||+.+|+|.++++.. ...+++..++.++.|++.||.|||+++|+||||||+|||++ .++
T Consensus 105 ~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~----~~~ 180 (496)
T PTZ00283 105 PRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC----SNG 180 (496)
T ss_pred ccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe----CCC
Confidence 1 1478999999999999988642 35689999999999999999999999999999999999998 678
Q ss_pred eEEEEecCCcccccCC---cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhh
Q 001103 1023 ICKVGDFGLSRIKCNT---LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGIL 1099 (1157)
Q Consensus 1023 ~VKLiDFGLAkl~~~~---~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il 1099 (1157)
.+||+|||+++..... ......+||+.|+|||++.+. .++.++|||||||+||||++|+.||........+..+.
T Consensus 181 ~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~--~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~ 258 (496)
T PTZ00283 181 LVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRK--PYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTL 258 (496)
T ss_pred CEEEEecccCeeccccccccccccccCCcceeCHHHhCCC--CCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHh
Confidence 9999999998754322 223346799999999999854 57899999999999999999999999888777777666
Q ss_pred hcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1100 SNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1100 ~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
..... .++..+++++++||.+||+.||.+||++.+++++.+
T Consensus 259 ~~~~~-~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~ 299 (496)
T PTZ00283 259 AGRYD-PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPI 299 (496)
T ss_pred cCCCC-CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHH
Confidence 54443 467788999999999999999999999999998743
No 127
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=1.7e-37 Score=320.33 Aligned_cols=248 Identities=25% Similarity=0.433 Sum_probs=208.9
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||+|+||.||++++. +..+|+|.++.... ....+.+.+|+.+++.++||||+++++.+.+ ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 71 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-------SSAVEDSRKEAVLLAKMKHPNIVAFKESFEA--DG 71 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-------hHHHHHHHHHHHHHHhCCCCCcceEEEEEEE--CC
Confidence 5889999999999999999884 67799999875321 1124567789999999999999999999987 56
Q ss_pred cEEEEEEeecCCcchhhhcc-ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLAR-KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr-~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
.+|++|||+++++|.+++.. ....+++..++.++.|++.||.|||++||+|+||||+|||++ .++.++|+|||++
T Consensus 72 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~----~~~~~~l~dfg~~ 147 (255)
T cd08219 72 HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT----QNGKVKLGDFGSA 147 (255)
T ss_pred EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC----CCCcEEEcccCcc
Confidence 89999999999999988764 345588999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
....... ......|++.|+|||++.+. .++.++|+||||+++|+|++|+.||...........+..... ..++..+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~--~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~ 224 (255)
T cd08219 148 RLLTSPGAYACTYVGTPYYVPPEIWENM--PYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSY-KPLPSHY 224 (255)
T ss_pred eeecccccccccccCCccccCHHHHccC--CcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCC-CCCCccc
Confidence 7543322 23345689999999998754 578899999999999999999999998776666665554433 3456778
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
+..+++||.+||+.||.+||++.+++..
T Consensus 225 ~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 225 SYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred CHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 8999999999999999999999999874
No 128
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.7e-37 Score=322.17 Aligned_cols=255 Identities=27% Similarity=0.408 Sum_probs=210.3
Q ss_pred CeeEEEEecccCcEEEEEEEE-CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 876 DLEELQELGSGTFGTVYRGKW-RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~-kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
+|++.+.||+|+||+||++.. .+..+|||.++..... ..........+.+|+++++.++|+||+++++++.+ ...
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~--~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~ 76 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSN--VLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD--DNT 76 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccc--hhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec--CCe
Confidence 577889999999999999987 5777999988754221 11223335678999999999999999999999987 578
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
.+++|||+++++|.+++.+.. .+++..+..++.|++.||+|||+.+|+|+||||+|||++ ..+.+||+|||++..
T Consensus 77 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~----~~~~~~l~dfg~~~~ 151 (265)
T cd06631 77 ISIFMEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM----PNGIIKLIDFGCARR 151 (265)
T ss_pred EEEEEecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC----CCCeEEeccchhhHh
Confidence 999999999999999997644 478999999999999999999999999999999999998 678999999999875
Q ss_pred ccC-------CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc-CCCCC
Q 001103 1035 KCN-------TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN-TLRPQ 1106 (1157)
Q Consensus 1035 ~~~-------~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~-~lrpe 1106 (1157)
... ........|+..|+|||.+.+. .++.++|+|||||++|+|++|+.||...........+... ...+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 229 (265)
T cd06631 152 LAWVGLHGTHSNMLKSMHGTPYWMAPEVINES--GYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPR 229 (265)
T ss_pred hhhccccccccccccccCCCccccChhhhcCC--CCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCC
Confidence 321 1122345689999999999754 5688999999999999999999999876655444443332 34455
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
++..++.++.++|.+||+.+|.+||++.+++++.+
T Consensus 230 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~ 264 (265)
T cd06631 230 LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264 (265)
T ss_pred CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 77788999999999999999999999999998653
No 129
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.6e-37 Score=322.22 Aligned_cols=245 Identities=33% Similarity=0.586 Sum_probs=202.9
Q ss_pred EecccCcEEEEEEEE----CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEE
Q 001103 882 ELGSGTFGTVYRGKW----RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~----kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyL 957 (1157)
+||+|+||.||+|.+ .+..+|+|+++... ......+.+.+|+.+++.++||||+++++++.. ...++
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~------~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---~~~~l 72 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN------NDPALKDELLREANVMQQLDNPYIVRMIGICEA---ESWML 72 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC------CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---CCcEE
Confidence 589999999999976 35669999887541 112345778899999999999999999998754 35789
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN 1037 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~ 1037 (1157)
||||+.+++|.+++.+. +.+++..++.++.|++.||+|||++||+||||||.|||++ .++.+||+|||++.....
T Consensus 73 v~e~~~~~~L~~~l~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~----~~~~~kl~Dfg~~~~~~~ 147 (257)
T cd05116 73 VMELAELGPLNKFLQKN-KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV----TQHYAKISDFGLSKALGA 147 (257)
T ss_pred EEecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc----CCCeEEECCCccccccCC
Confidence 99999999999998654 3588999999999999999999999999999999999998 677899999999875433
Q ss_pred Ccc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCCCc
Q 001103 1038 TLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1038 ~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~iS 1112 (1157)
... .....++..|+|||.+... .++.++|+|||||++|||++ |+.||...........+.. ...+..+..++
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~-~~~~~~~~~~~ 224 (257)
T cd05116 148 DENYYKAKTHGKWPVKWYAPECMNYY--KFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES-GERMECPQRCP 224 (257)
T ss_pred CCCeeeecCCCCCCccccCHhHhccC--CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHC-CCCCCCCCCCC
Confidence 221 1122346789999998743 57889999999999999998 9999988776666655543 34456778899
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
+++.+||.+||+.||.+||++.+|...|..+
T Consensus 225 ~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 225 PEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred HHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 9999999999999999999999999998754
No 130
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=7.4e-38 Score=345.54 Aligned_cols=256 Identities=24% Similarity=0.330 Sum_probs=204.0
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC-
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG- 952 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~- 952 (1157)
+|++++.||+|+||+||++++ .++.||||++..... .....+.+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ------NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc------chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCcc
Confidence 578899999999999999987 578899998864310 11124567899999999999999999999876321
Q ss_pred --CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 953 --GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 953 --~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
..+|+||||+. ++|..++... +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 75 ~~~~~~lv~e~~~-~~l~~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~----~~~~~kL~Dfg 148 (372)
T cd07853 75 PFEEIYVVTELMQ-SDLHKIIVSP-QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN----SNCVLKICDFG 148 (372)
T ss_pred ccceEEEEeeccc-cCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC----CCCCEEecccc
Confidence 26899999997 4777777543 4589999999999999999999999999999999999998 67899999999
Q ss_pred CcccccCC--cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh--------
Q 001103 1031 LSRIKCNT--LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS-------- 1100 (1157)
Q Consensus 1031 LAkl~~~~--~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~-------- 1100 (1157)
++...... .......+|+.|+|||++.+. ..++.++|||||||++|||++|+.||.+......+..+..
T Consensus 149 ~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~ 227 (372)
T cd07853 149 LARVEEPDESKHMTQEVVTQYYRAPEILMGS-RHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLE 227 (372)
T ss_pred ceeecccCccccCCCCCcCCCcCCHHHHcCC-CCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence 99754322 222334689999999998864 3478899999999999999999999987765544433321
Q ss_pred ---------------cCCCC-------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1101 ---------------NTLRP-------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1101 ---------------~~lrp-------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
....+ .+....++++.+||.+||+.||.+|||+.+++++.+...
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 293 (372)
T cd07853 228 AMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDE 293 (372)
T ss_pred HHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCC
Confidence 11111 123446889999999999999999999999999987543
No 131
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.8e-38 Score=330.58 Aligned_cols=246 Identities=21% Similarity=0.298 Sum_probs=196.1
Q ss_pred ecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEE
Q 001103 883 LGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTE 960 (1157)
Q Consensus 883 LGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVME 960 (1157)
||+|+||.||+++.+ |+.||+|++.+...... .....+..|++++++++||||+++++++.. ...+++|||
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~-----~~~~~~~~E~~il~~l~hp~i~~~~~~~~~--~~~~~lv~e 73 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKK-----SGEKMALLEKEILEKVNSPFIVNLAYAFES--KTHLCLVMS 73 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcc-----hhhHHHHHHHHHHHhcCCCcEEEEEEEEec--CCeEEEEEe
Confidence 799999999999874 77899999875422111 112345679999999999999999999877 568999999
Q ss_pred eecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCc
Q 001103 961 YMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL 1039 (1157)
Q Consensus 961 YmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~ 1039 (1157)
|+.+++|..++... ...+++..++.++.|++.||+|||++||+||||||+|||++ .++.++|+|||++.......
T Consensus 74 ~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~----~~~~~~l~Dfg~~~~~~~~~ 149 (277)
T cd05607 74 LMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD----DQGNCRLSDLGLAVELKDGK 149 (277)
T ss_pred cCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc----CCCCEEEeeceeeeecCCCc
Confidence 99999998887543 34588899999999999999999999999999999999998 67789999999987654443
Q ss_pred ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh----HHHHHhhhcCCCCCCCCCCcHHH
Q 001103 1040 VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG----AIIGGILSNTLRPQIPERCDPEW 1115 (1157)
Q Consensus 1040 ~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e----eil~~Il~~~lrpeip~~iSpeL 1115 (1157)
......|+..|+|||++.+. .++.++|+|||||++|+|++|+.||...... ............. ....+++++
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 226 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEE--PYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF-EHQNFTEES 226 (277)
T ss_pred eeeccCCCCCccCHHHHccC--CCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc-ccccCCHHH
Confidence 33445799999999999754 4789999999999999999999999765332 2222222222211 224578999
Q ss_pred HHHHHHHhccCCCCCCCHH----HHHHHHHH
Q 001103 1116 RKLMEECWSFNPAARPSFT----EITNRLRV 1142 (1157)
Q Consensus 1116 rdLIkrCLqkDPskRPSae----ELLe~Lr~ 1142 (1157)
++||.+||++||.+||++. +++.+.+.
T Consensus 227 ~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f 257 (277)
T cd05607 227 KDICRLFLAKKPEDRLGSREKNDDPRKHEFF 257 (277)
T ss_pred HHHHHHHhccCHhhCCCCccchhhhhcChhh
Confidence 9999999999999999994 45555554
No 132
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1.1e-37 Score=331.20 Aligned_cols=255 Identities=21% Similarity=0.330 Sum_probs=208.1
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|++.+.||+|+||.||++.+. ++.||||.+.+..... ......+.+|+.+++.++|++|+++++.+.+ ..
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--~~ 73 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-----RKGESMALNEKQILEKVNSRFVVSLAYAYET--KD 73 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccc-----hHHHHHHHHHHHHHHhCCCCCeeeeeEEEec--CC
Confidence 4778899999999999999884 6689999987643221 1223456789999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++||||+.+++|.+++... ...+++..++.++.|++.||.|||+++|+||||||+|||++ ..+.++|+|||++
T Consensus 74 ~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~----~~~~~~l~Dfg~~ 149 (285)
T cd05630 74 ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD----DHGHIRISDLGLA 149 (285)
T ss_pred EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC----CCCCEEEeeccce
Confidence 899999999999999888543 34589999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh---HHHHHhhhcCCCCCCCC
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG---AIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e---eil~~Il~~~lrpeip~ 1109 (1157)
.............|+..|+|||++.+. .++.++|||||||++|+|++|+.||...... .....+.. .....++.
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~-~~~~~~~~ 226 (285)
T cd05630 150 VHVPEGQTIKGRVGTVGYMAPEVVKNE--RYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK-EVQEEYSE 226 (285)
T ss_pred eecCCCccccCCCCCccccChHHHcCC--CCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh-hhhhhcCc
Confidence 765443333445799999999999754 5789999999999999999999999865422 22222221 12234566
Q ss_pred CCcHHHHHHHHHHhccCCCCCCC-----HHHHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPS-----FTEITNRLRVMS 1144 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPS-----aeELLe~Lr~Lk 1144 (1157)
.+++++++||.+||+.||.+||| +++++++.+...
T Consensus 227 ~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~ 266 (285)
T cd05630 227 KFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQ 266 (285)
T ss_pred cCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhc
Confidence 78899999999999999999999 999999888753
No 133
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-39 Score=366.56 Aligned_cols=250 Identities=29% Similarity=0.480 Sum_probs=217.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
...|..++.||+|+||.||+|.+. ++.||+|++..... +..++.+.+|+.+|.+++++||.++|+.+..
T Consensus 12 ~~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~-------~deIediqqei~~Ls~~~~~~it~yygsyl~-- 82 (467)
T KOG0201|consen 12 ELLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA-------EDEIEDIQQEISVLSQCDSPNITEYYGSYLK-- 82 (467)
T ss_pred ccccccchhccccccceeeeeeeccccceEEEEEechhhc-------chhhHHHHHHHHHHHhcCcchHHhhhhheee--
Confidence 456777899999999999999984 66799999987532 2336778899999999999999999999988
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
+..++++||||.||++.++|+.. ..+++..+..++++++.||.|||.++.+|||||+.|||+. ..+.+||+|||+
T Consensus 83 g~~LwiiMey~~gGsv~~lL~~~-~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s----~~g~vkl~DfgV 157 (467)
T KOG0201|consen 83 GTKLWIIMEYCGGGSVLDLLKSG-NILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS----ESGDVKLADFGV 157 (467)
T ss_pred cccHHHHHHHhcCcchhhhhccC-CCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe----ccCcEEEEecce
Confidence 67899999999999999999754 3458888888999999999999999999999999999998 668999999999
Q ss_pred cccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCC
Q 001103 1032 SRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPER 1110 (1157)
Q Consensus 1032 Akl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~ 1110 (1157)
+....... ...+++|||.|||||++++. .|+.|+||||||++.+||++|.+||...+....+..|- ...+|.+...
T Consensus 158 a~ql~~~~~rr~tfvGTPfwMAPEVI~~~--~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIp-k~~PP~L~~~ 234 (467)
T KOG0201|consen 158 AGQLTNTVKRRKTFVGTPFWMAPEVIKQS--GYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIP-KSAPPRLDGD 234 (467)
T ss_pred eeeeechhhccccccccccccchhhhccc--cccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEecc-CCCCCccccc
Confidence 98765543 33678999999999999954 68999999999999999999999999998866555443 4455667778
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
+++.|++||..||.+||+.|||+.+|+++-
T Consensus 235 ~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~ 264 (467)
T KOG0201|consen 235 FSPPFKEFVEACLDKNPEFRPSAKELLKHK 264 (467)
T ss_pred cCHHHHHHHHHHhhcCcccCcCHHHHhhhH
Confidence 999999999999999999999999999973
No 134
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=2.1e-37 Score=320.60 Aligned_cols=254 Identities=31% Similarity=0.517 Sum_probs=207.3
Q ss_pred eeEEEEecccCcEEEEEEEEC-----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 877 LEELQELGSGTFGTVYRGKWR-----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k-----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
|++.+.||+|+||.||+|.+. +..||||+++.... .......+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH------TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEAS 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC------CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCC
Confidence 567889999999999999873 25599999875321 1222467889999999999999999999876532
Q ss_pred C----CcEEEEEEeecCCcchhhhccc-----cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCC
Q 001103 952 G----GTMATVTEYMVNGSLRHVLARK-----DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRP 1022 (1157)
Q Consensus 952 ~----~~LyLVMEYmeGGSL~dlLkr~-----gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g 1022 (1157)
. ...+++|||+++++|..++... ...+++..++.++.|++.||.|||+++|+||||||+|||++ +++
T Consensus 75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~----~~~ 150 (273)
T cd05035 75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR----EDM 150 (273)
T ss_pred ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC----CCC
Confidence 2 2478999999999998887432 24588999999999999999999999999999999999998 677
Q ss_pred eEEEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHh
Q 001103 1023 ICKVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGI 1098 (1157)
Q Consensus 1023 ~VKLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~I 1098 (1157)
.+||+|||+++....... .....++..|+|||.+.+. .++.++|||||||++|||++ |..||......+.+..+
T Consensus 151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~ 228 (273)
T cd05035 151 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADR--VYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYL 228 (273)
T ss_pred eEEECCccceeeccccccccccccccCCccccCHhhcccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 999999999875433221 1122356789999998643 57889999999999999999 99999888777776666
Q ss_pred hhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1099 LSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1099 l~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
... .....+..+++++.++|.+||+.||.+||++.++++.|..+
T Consensus 229 ~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 229 RHG-NRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred HcC-CCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 544 34456778899999999999999999999999999999865
No 135
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.4e-37 Score=325.25 Aligned_cols=253 Identities=28% Similarity=0.495 Sum_probs=202.4
Q ss_pred eeEEEEecccCcEEEEEEEE------CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 877 LEELQELGSGTFGTVYRGKW------RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~------kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
|++++.||+|+||+||++.. .+..||+|+++.... ......+.+|++++++++||||+++++++...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 78 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG-------QQNTSGWKKEINILKTLYHENIVKYKGCCSEQ 78 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC-------hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 48899999999999988653 356799999875421 11245678899999999999999999988765
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
....++++|||+.+++|.+++... .+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+|||
T Consensus 79 ~~~~~~lv~e~~~~~~l~~~~~~~--~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~----~~~~~~l~dfg 152 (283)
T cd05080 79 GGKGLQLIMEYVPLGSLRDYLPKH--KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD----NDRLVKIGDFG 152 (283)
T ss_pred CCceEEEEecCCCCCCHHHHHHHc--CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc----CCCcEEEeecc
Confidence 556789999999999999998653 489999999999999999999999999999999999998 66789999999
Q ss_pred CcccccCCcc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh--------------
Q 001103 1031 LSRIKCNTLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-------------- 1092 (1157)
Q Consensus 1031 LAkl~~~~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-------------- 1092 (1157)
++........ .....++..|+|||.+.+. .++.++||||||+++|+|++|..||......
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05080 153 LAKAVPEGHEYYRVREDGDSPVFWYAVECLKEN--KFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTV 230 (283)
T ss_pred cccccCCcchhhccCCCCCCCceeeCHhHhccc--CCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccch
Confidence 9876443221 1123456779999998743 5788999999999999999999998643211
Q ss_pred HHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1093 AIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1093 eil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
..+............+..++.++++|+.+||+.+|++|||++++++.|+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 231 VRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 0111112222333456678899999999999999999999999999998764
No 136
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6e-38 Score=329.15 Aligned_cols=253 Identities=31% Similarity=0.547 Sum_probs=208.4
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeee
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGV 946 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygv 946 (1157)
..+|+++++||+|+||.||+|.+. +..||||+++... .......+.+|+.+++.++||||++++++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 76 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-------EGPLREEFKHEAMMRSRLQHPNIVCLLGV 76 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-------CHHHHHHHHHHHHHHhcCCCCCcCeEEEE
Confidence 346778899999999999999874 3569999987531 12235678899999999999999999999
Q ss_pred eecCCCCcEEEEEEeecCCcchhhhccc---------------cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccc
Q 001103 947 VPNGPGGTMATVTEYMVNGSLRHVLARK---------------DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDN 1011 (1157)
Q Consensus 947 f~de~~~~LyLVMEYmeGGSL~dlLkr~---------------gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPEN 1011 (1157)
+.. ....++++||+.+++|.+++... ...+++..++.++.|++.||.|||++||+||||||+|
T Consensus 77 ~~~--~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~N 154 (283)
T cd05091 77 VTK--EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRN 154 (283)
T ss_pred EcC--CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhh
Confidence 877 45789999999999999887421 2347888899999999999999999999999999999
Q ss_pred eeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCC
Q 001103 1012 LLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYA 1087 (1157)
Q Consensus 1012 ILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~ 1087 (1157)
||++ ..+.+||+|||+++...... ......+++.|+|||.+.+. .++.++|||||||++|||++ |..||.
T Consensus 155 il~~----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~~g~~p~~ 228 (283)
T cd05091 155 VLVF----DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYG--KFSIDSDIWSYGVVLWEVFSYGLQPYC 228 (283)
T ss_pred eEec----CCCceEecccccccccccchheeeccCccCCccccCHHHHhcC--CCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence 9998 66789999999987543221 12233467899999998743 57889999999999999998 899998
Q ss_pred CCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1088 NMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1088 g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+.........+..... ...+..++..+.+|+.+||+.+|.+||++++|+..|+.
T Consensus 229 ~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 229 GYSNQDVIEMIRNRQV-LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred CCCHHHHHHHHHcCCc-CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 8877777666655443 34677899999999999999999999999999999864
No 137
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=3.3e-37 Score=317.13 Aligned_cols=252 Identities=27% Similarity=0.462 Sum_probs=209.6
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++++.||+|++|.||+++++ +..||+|++..... .....+.+.+|++++++++|||++++++.+... ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~-~~ 73 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA------SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGE-DG 73 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc------CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCC-CC
Confidence 4889999999999999999874 56799999875421 122245678899999999999999999887542 45
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
.++++|||+++++|.+++... ...+++.+++.++.|++.||.|||++||+||||||+|||++ ..+.++|+|||++
T Consensus 74 ~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~----~~~~~~l~df~~~ 149 (257)
T cd08223 74 LLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT----RTNIIKVGDLGIA 149 (257)
T ss_pred EEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe----cCCcEEEecccce
Confidence 689999999999999988753 45589999999999999999999999999999999999998 6779999999998
Q ss_pred ccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
...... .......+++.|+|||++.+. .++.++|+||||+++|+|++|+.||...........+..... +..+...
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 226 (257)
T cd08223 150 RVLENQCDMASTLIGTPYYMSPELFSNK--PYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKL-PPMPKDY 226 (257)
T ss_pred EEecccCCccccccCCcCccChhHhcCC--CCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCC-CCCcccc
Confidence 754332 223345689999999998754 578899999999999999999999987776665555554433 3456778
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
++++.+||.+||+.+|.+||++.+++++.+
T Consensus 227 ~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~ 256 (257)
T cd08223 227 SPELGELIATMLSKRPEKRPSVKSILRQPY 256 (257)
T ss_pred CHHHHHHHHHHhccCcccCCCHHHHhcCCC
Confidence 999999999999999999999999998754
No 138
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.8e-37 Score=330.31 Aligned_cols=255 Identities=25% Similarity=0.368 Sum_probs=205.9
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
.++|+++++||+|+||.||+++++ +..||+|.++...... ....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-- 75 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG-------APCTAIREVSLLKDLKHANIVTLHDIIHT-- 75 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC-------chhHHHHHHHHHHhcCCCCcceEEEEEec--
Confidence 468999999999999999999884 6779999987542111 12346689999999999999999999987
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
...+++||||+. ++|..++.+....+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||+
T Consensus 76 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~----~~~~~kl~dfg~ 150 (301)
T cd07873 76 EKSLTLVFEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN----ERGELKLADFGL 150 (301)
T ss_pred CCeEEEEEeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC----CCCcEEECcCcc
Confidence 568999999997 488888876666688999999999999999999999999999999999998 677899999999
Q ss_pred cccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC-------
Q 001103 1032 SRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL------- 1103 (1157)
Q Consensus 1032 Akl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l------- 1103 (1157)
+....... ......+++.|+|||++.+. ..++.++|||||||++|+|++|++||......+.+..+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 229 (301)
T cd07873 151 ARAKSIPTKTYSNEVVTLWYRPPDILLGS-TDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETW 229 (301)
T ss_pred hhccCCCCCcccccceeecccCcHHHhCC-CCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhc
Confidence 87543222 22334678999999998754 3578899999999999999999999987765544433221100
Q ss_pred ----------CCC-----------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1104 ----------RPQ-----------IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1104 ----------rpe-----------ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
... ....+++.+++||.+||+.||.+|||+++++++.|..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~ 290 (301)
T cd07873 230 PGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFH 290 (301)
T ss_pred hhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCcccc
Confidence 000 1234688899999999999999999999999987764
No 139
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.4e-37 Score=322.67 Aligned_cols=254 Identities=35% Similarity=0.613 Sum_probs=210.3
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--C---ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--G---TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--G---t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
..+|++.+.||+|+||.||+|++. + ..+|+|.++... . ......+.+|+.++++++||||+++++++.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~----~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 75 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY----T---EKQRRDFLSEASIMGQFDHPNIIHLEGVVT 75 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC----C---HHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 457899999999999999999873 2 258999876431 1 122467888999999999999999999987
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
. .+..++||||+++++|.+++.+....+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+|
T Consensus 76 ~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~----~~~~~~l~d 149 (267)
T cd05066 76 K--SKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN----SNLVCKVSD 149 (267)
T ss_pred c--CCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC----CCCeEEeCC
Confidence 6 5688999999999999999987666689999999999999999999999999999999999998 677999999
Q ss_pred cCCcccccCCcc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCC
Q 001103 1029 FGLSRIKCNTLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTL 1103 (1157)
Q Consensus 1029 FGLAkl~~~~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~l 1103 (1157)
||++........ .....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||......+....+... .
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~-~ 226 (267)
T cd05066 150 FGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEG-Y 226 (267)
T ss_pred CCcccccccccceeeecCCCccceeecCHhHhccC--ccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCC-C
Confidence 999875433211 1122345689999999753 57899999999999999886 99999887766666655543 3
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1104 RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1104 rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
+...+..+++.+.+++.+||+.+|.+||++.++++.|..+
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 4455667899999999999999999999999999998764
No 140
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.1e-37 Score=333.46 Aligned_cols=250 Identities=25% Similarity=0.367 Sum_probs=192.0
Q ss_pred EEEecccCcEEEEEEEEC----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcE
Q 001103 880 LQELGSGTFGTVYRGKWR----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~k----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~L 955 (1157)
.++||+|+||+||+|+++ +..||+|++..... ...+.+|++++++++||||+++++++.......+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 75 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----------SMSACREIALLRELKHPNVISLQKVFLSHADRKV 75 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEE
Confidence 468999999999999863 45699998875421 1346689999999999999999999876656789
Q ss_pred EEEEEeecCCcchhhhccc--------cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 956 ATVTEYMVNGSLRHVLARK--------DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~--------gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
+++|||+.+ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||+...+...+.+||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~ 154 (317)
T cd07868 76 WLLFDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA 154 (317)
T ss_pred EEEEeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEe
Confidence 999999865 777766421 23488999999999999999999999999999999999996444466789999
Q ss_pred ecCCcccccCCc----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh---------HH
Q 001103 1028 DFGLSRIKCNTL----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG---------AI 1094 (1157)
Q Consensus 1028 DFGLAkl~~~~~----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e---------ei 1094 (1157)
|||++....... ......||+.|+|||++.+. ..++.++|||||||++|+|++|++||...... ..
T Consensus 155 DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~ 233 (317)
T cd07868 155 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ 233 (317)
T ss_pred ecCceeccCCCCccccccCCccccccccCCHHHcCC-CCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHH
Confidence 999997643221 22346789999999998764 34788999999999999999999999754321 11
Q ss_pred HHHhhhcC-----------------------CC-------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q 001103 1095 IGGILSNT-----------------------LR-------------PQIPERCDPEWRKLMEECWSFNPAARPSFTEITN 1138 (1157)
Q Consensus 1095 l~~Il~~~-----------------------lr-------------peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe 1138 (1157)
+..+.... +. .......+.++.+||.+||++||.+|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~ 313 (317)
T cd07868 234 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 313 (317)
T ss_pred HHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence 11111000 00 0001123567889999999999999999999998
Q ss_pred HHH
Q 001103 1139 RLR 1141 (1157)
Q Consensus 1139 ~Lr 1141 (1157)
+.+
T Consensus 314 hp~ 316 (317)
T cd07868 314 DPY 316 (317)
T ss_pred CCC
Confidence 764
No 141
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.9e-38 Score=343.47 Aligned_cols=246 Identities=23% Similarity=0.378 Sum_probs=199.2
Q ss_pred EEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||.||+++++ ++.||+|++++..... ......+.+|+.++.++ +||||+++++++.. ...+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~--~~~~~l 73 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVND-----DEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT--ESRLFF 73 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcc-----hhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe--CCEEEE
Confidence 36999999999999884 5679999998753211 12245677888888877 89999999999987 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+++++|..++.+. +.+++..++.++.||+.||.|||+++|+||||||+|||++ .++.+||+|||+++...
T Consensus 74 v~E~~~~~~L~~~~~~~-~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~----~~~~~kL~DfG~~~~~~~ 148 (329)
T cd05618 74 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD----SEGHIKLTDYGMCKEGLR 148 (329)
T ss_pred EEeCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC----CCCCEEEeeCCccccccC
Confidence 99999999998887654 4589999999999999999999999999999999999998 67799999999987532
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---------hhHHHHHhhhcCCCCCC
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH---------CGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~---------~eeil~~Il~~~lrpei 1107 (1157)
........+||+.|+|||++.+. .++.++|||||||++|+|++|+.||.... .......+... ...+
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~--~~~~ 224 (329)
T cd05618 149 PGDTTSTFCGTPNYIAPEILRGE--DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK--QIRI 224 (329)
T ss_pred CCCccccccCCccccCHHHHcCC--CCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC--CCCC
Confidence 22233446799999999999864 57889999999999999999999995311 11122223322 3356
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCCC------HHHHHHHHHH
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARPS------FTEITNRLRV 1142 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRPS------aeELLe~Lr~ 1142 (1157)
|..++..+++||.+||+.||.+||+ +.+++++.+.
T Consensus 225 p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f 265 (329)
T cd05618 225 PRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 265 (329)
T ss_pred CCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCC
Confidence 7788999999999999999999998 5788888654
No 142
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=2e-37 Score=332.10 Aligned_cols=259 Identities=33% Similarity=0.573 Sum_probs=209.0
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--Cce--EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTD--IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGV 946 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~--VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygv 946 (1157)
+...+|++.+.||+|+||.||+|+++ +.. +|+|.++... .......+.+|+.++.++ +||||++++++
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~ 76 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGHHPNIINLLGA 76 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccC-------CHHHHHHHHHHHHHHHHhcCCCCcceEEEE
Confidence 45678999999999999999999874 433 5666655321 122346788899999999 89999999999
Q ss_pred eecCCCCcEEEEEEeecCCcchhhhcccc---------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccc
Q 001103 947 VPNGPGGTMATVTEYMVNGSLRHVLARKD---------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDN 1011 (1157)
Q Consensus 947 f~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPEN 1011 (1157)
+.. .+..|+||||+++++|.+++.+.+ ..+++..++.++.|++.||+|||++||+||||||+|
T Consensus 77 ~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~N 154 (303)
T cd05088 77 CEH--RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARN 154 (303)
T ss_pred ECC--CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchhe
Confidence 877 568999999999999999986432 247889999999999999999999999999999999
Q ss_pred eeeccCCCCCCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 001103 1012 LLVNLRDPQRPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMH 1090 (1157)
Q Consensus 1012 ILLd~dd~e~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~ 1090 (1157)
||++ .++.+||+|||++.............++..|+|||.+.+. .++.++|||||||++|+|++ |.+||....
T Consensus 155 ili~----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~ellt~g~~p~~~~~ 228 (303)
T cd05088 155 ILVG----ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 228 (303)
T ss_pred EEec----CCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhcc--CCcccccchhhhhHHHHHHhcCCCCcccCC
Confidence 9998 6778999999998643221112222346779999998754 47889999999999999998 999998777
Q ss_pred hhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1091 CGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1091 ~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
..+....+. .......+..+++++.+||.+||+.+|.+||++.+++..|..+...
T Consensus 229 ~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 229 CAELYEKLP-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred hHHHHHHHh-cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 666555443 3334445666889999999999999999999999999998876544
No 143
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=4.1e-37 Score=323.00 Aligned_cols=256 Identities=33% Similarity=0.557 Sum_probs=204.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEE------CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW------RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~------kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
..+|++++.||+|+||+||+++. .+..||||++.... ....+.+.+|+++++.++||||+++++++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~ 74 (284)
T cd05081 3 ERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST--------AEHLRDFEREIEILKSLQHDNIVKYKGVC 74 (284)
T ss_pred cccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC--------HHHHHHHHHHHHHHHhCCCCCeeEEEEEE
Confidence 35889999999999999999875 36679999876531 22246788999999999999999999987
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
.......+++||||+++++|.+++.+....+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+
T Consensus 75 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~----~~~~~~l~ 150 (284)
T cd05081 75 YSAGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE----SENRVKIG 150 (284)
T ss_pred ccCCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC----CCCeEEEC
Confidence 65545678999999999999999976655689999999999999999999999999999999999998 67789999
Q ss_pred ecCCcccccCCcc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhH----------
Q 001103 1028 DFGLSRIKCNTLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGA---------- 1093 (1157)
Q Consensus 1028 DFGLAkl~~~~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~ee---------- 1093 (1157)
|||++........ .....++..|+|||++.+. .++.++|||||||++|||++|..|+.......
T Consensus 151 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~ 228 (284)
T cd05081 151 DFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTES--KFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQG 228 (284)
T ss_pred CCcccccccCCCcceeecCCCCCceEeeCHHHhccC--CcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhccccccc
Confidence 9999885432211 1112244569999998754 57899999999999999999887764332110
Q ss_pred -----HHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1094 -----IIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1094 -----il~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.+..++........+..++.++.+||.+||+.+|++|||+.+|++.|..+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 229 QMIVYHLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred ccchHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 01112223333445567889999999999999999999999999998764
No 144
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-38 Score=349.78 Aligned_cols=258 Identities=26% Similarity=0.344 Sum_probs=218.3
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|+.+.+|++|+||.||+|+++ +..||+|+++...-... ..-.-+||+.+|.+++|||||.+-.+......
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G------FPItsLREIniLl~~~H~NIV~vkEVVvG~~~ 149 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG------FPITSLREINILLKARHPNIVEVKEVVVGSNM 149 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC------CcchhHHHHHHHHhcCCCCeeeeEEEEecccc
Confidence 57999999999999999999995 55699999987532111 12235789999999999999999999888777
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+.+|||||||+. +|..++....++|...++..++.|++.||+|||.++|+||||||+|+|++ ..|.+||+|||+|
T Consensus 150 d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~----~~G~lKiaDFGLA 224 (419)
T KOG0663|consen 150 DKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS----HKGILKIADFGLA 224 (419)
T ss_pred ceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec----cCCcEEecccchh
Confidence 789999999987 99999988778899999999999999999999999999999999999999 8889999999999
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC---------
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT--------- 1102 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~--------- 1102 (1157)
+....+. ..+..+-|.+|.|||++.|. ..|+..+|+||+|||+.||+++++.|.+....+.+..|....
T Consensus 225 R~ygsp~k~~T~lVVTLWYRaPELLLG~-~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwp 303 (419)
T KOG0663|consen 225 REYGSPLKPYTPLVVTLWYRAPELLLGA-KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWP 303 (419)
T ss_pred hhhcCCcccCcceEEEeeecCHHHhcCC-cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCC
Confidence 9876663 35567899999999999987 478999999999999999999999999988777766664311
Q ss_pred --------------------CCCCCCCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1103 --------------------LRPQIPER-CDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1103 --------------------lrpeip~~-iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
++..++.. +++.-.+|+..+|.+||.+|.|+++.|++-++.-
T Consensus 304 g~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e 366 (419)
T KOG0663|consen 304 GYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKHEYFRE 366 (419)
T ss_pred CccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhccccccc
Confidence 00111111 4577889999999999999999999999876644
No 145
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=2e-37 Score=321.46 Aligned_cols=252 Identities=33% Similarity=0.607 Sum_probs=209.4
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
+..++|+++++||+|+||.||++.+. +..+|+|.+...... ...+.+|+.++++++||+|+++++++..
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~---------~~~~~~E~~~l~~l~~~~i~~~~~~~~~- 72 (260)
T cd05070 3 IPRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS---------PESFLEEAQIMKKLRHDKLVQLYAVVSE- 72 (260)
T ss_pred CchHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC---------HHHHHHHHHHHHhcCCCceEEEEeEECC-
Confidence 45568999999999999999999874 456999988754211 2457899999999999999999998754
Q ss_pred CCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
...+++|||+.+++|.+++... ...+++..++.++.|++.||.|||+++|+||||||+|||++ .++.++|+||
T Consensus 73 --~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~----~~~~~~l~df 146 (260)
T cd05070 73 --EPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG----DGLVCKIADF 146 (260)
T ss_pred --CCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe----CCceEEeCCc
Confidence 3578999999999999998653 34588999999999999999999999999999999999998 6779999999
Q ss_pred CCcccccCCcc--cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCC
Q 001103 1030 GLSRIKCNTLV--SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1030 GLAkl~~~~~~--sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpe 1106 (1157)
|++........ .....++..|+|||.+.+. .++.++|+||||+++|+|++ |.+||......+....+.. .....
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~ 223 (260)
T cd05070 147 GLARLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVER-GYRMP 223 (260)
T ss_pred eeeeeccCcccccccCCCCCccccChHHHhcC--CCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc-CCCCC
Confidence 99975433221 1223456789999998743 57889999999999999999 9999988777666665543 34455
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.+...+..+++||.+||..+|.+|||+.++.+.|+.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 677789999999999999999999999999998875
No 146
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.7e-37 Score=324.56 Aligned_cols=256 Identities=30% Similarity=0.555 Sum_probs=207.4
Q ss_pred cCCCeeEEEEecccCcEEEEEEEECC-------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEee
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWRG-------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYG 945 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~kG-------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLyg 945 (1157)
...+|++.+.||+|+||.||+|.+.+ ..||+|.+.... . ......+.+|+.+++.++|+||+++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~----~---~~~~~~~~~e~~~l~~l~~~~i~~~~~ 76 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESC----S---EQDESDFLMEALIMSKFNHQNIVRLIG 76 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCC----C---HHHHHHHHHHHHHHHhCCCCCEeeEEE
Confidence 34679999999999999999998854 458888765431 1 122356888999999999999999999
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhcccc------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCC
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKD------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDP 1019 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~g------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~ 1019 (1157)
++.+ ....++||||+.+++|.+++.+.. ..+++..++.++.||+.||+|||+++++||||||+|||++..+
T Consensus 77 ~~~~--~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~- 153 (277)
T cd05036 77 VSFE--RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG- 153 (277)
T ss_pred EEcc--CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC-
Confidence 8877 457789999999999999986543 2488999999999999999999999999999999999998332
Q ss_pred CCCeEEEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHH
Q 001103 1020 QRPICKVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAII 1095 (1157)
Q Consensus 1020 e~g~VKLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil 1095 (1157)
....+||+|||+++....... ......+..|+|||++.+. .++.++|||||||++|+|++ |..||.........
T Consensus 154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~ 231 (277)
T cd05036 154 PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDG--IFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVM 231 (277)
T ss_pred CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcC--CcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 345799999999976432211 1122345679999998754 57999999999999999997 99999987766655
Q ss_pred HHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1096 GGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1096 ~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
..+. ...+...+..++.++.+||.+||+.+|++|||+.+++++|.
T Consensus 232 ~~~~-~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 232 EFVT-GGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 5443 33445567788999999999999999999999999999985
No 147
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.1e-37 Score=326.93 Aligned_cols=259 Identities=34% Similarity=0.555 Sum_probs=213.6
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEe
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFY 944 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLy 944 (1157)
++..+|.+.+.||+|+||.||++++. +..+++|.++... ....+.+.+|+.++++++||||++++
T Consensus 2 ~~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~ 73 (291)
T cd05094 2 IKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT--------LAARKDFQREAELLTNLQHEHIVKFY 73 (291)
T ss_pred CchHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc--------HHHHHHHHHHHHHHhcCCCCCcceEE
Confidence 34568999999999999999999863 2348888876431 12235688999999999999999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhcccc---------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCc
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKC 1009 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKP 1009 (1157)
+++.. ....++||||+++++|.+++.... ..+++..++.++.||+.||+|||++||+||||||
T Consensus 74 ~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 151 (291)
T cd05094 74 GVCGD--GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLAT 151 (291)
T ss_pred EEEcc--CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCc
Confidence 99877 567899999999999999986432 3478899999999999999999999999999999
Q ss_pred cceeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCC
Q 001103 1010 DNLLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEP 1085 (1157)
Q Consensus 1010 ENILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~P 1085 (1157)
+|||++ .++.+||+|||++....... ......++..|+|||.+.+. .++.++|||||||++|+|++ |+.|
T Consensus 152 ~Nil~~----~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~t~g~~p 225 (291)
T cd05094 152 RNCLVG----ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR--KFTTESDVWSFGVILWEIFTYGKQP 225 (291)
T ss_pred ceEEEc----cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccC--CCCchhhHHHHHHHHHHHHhCCCCC
Confidence 999998 67799999999987543321 12234568889999998754 57889999999999999998 9999
Q ss_pred CCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1086 YANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1086 F~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
|........+..+.... .+..+..++..+.+|+.+||+.+|.+||++.++++.|..+.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~~ 286 (291)
T cd05094 226 WFQLSNTEVIECITQGR-VLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKAT 286 (291)
T ss_pred CCCCCHHHHHHHHhCCC-CCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhhc
Confidence 98877776666554433 33455667899999999999999999999999999999987653
No 148
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.9e-37 Score=350.86 Aligned_cols=260 Identities=30% Similarity=0.488 Sum_probs=212.5
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEECC-------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCcee
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKWRG-------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVV 941 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~kG-------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIV 941 (1157)
+.+...+|++++.||+|+||.||+|++.+ ..||||+++.... ....+.+.+|+++++++. |||||
T Consensus 32 ~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-------~~~~~~~~~Ei~~l~~l~~HpnIv 104 (400)
T cd05105 32 WEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR-------SSEKQALMSELKIMTHLGPHLNIV 104 (400)
T ss_pred eeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC-------hHHHHHHHHHHHHHHhcCCCCCee
Confidence 34556789999999999999999998732 3599999865311 122467889999999996 99999
Q ss_pred EEeeeeecCCCCcEEEEEEeecCCcchhhhcccc----------------------------------------------
Q 001103 942 AFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------------------------------------- 975 (1157)
Q Consensus 942 kLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------------------------------------- 975 (1157)
++++++.. ...+|||||||++|+|.+++.+..
T Consensus 105 ~l~~~~~~--~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (400)
T cd05105 105 NLLGACTK--SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQ 182 (400)
T ss_pred eEEEEEcc--CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccccccccccc
Confidence 99999977 568999999999999988875421
Q ss_pred -------------------------------------------------ccccHHHHHHHHHHHHHHHHHHHHCCceecc
Q 001103 976 -------------------------------------------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFD 1006 (1157)
Q Consensus 976 -------------------------------------------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRD 1006 (1157)
+.+++..++.++.|++.||.|||+++|+|||
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~d 262 (400)
T cd05105 183 ADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRD 262 (400)
T ss_pred ccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCC
Confidence 2367788899999999999999999999999
Q ss_pred CCccceeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-C
Q 001103 1007 LKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-G 1082 (1157)
Q Consensus 1007 LKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-G 1082 (1157)
|||+|||++ ..+.+||+|||+++...... ......++..|+|||.+.+. .++.++|||||||++|+|++ |
T Consensus 263 ikp~Nill~----~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwSlGvil~ellt~g 336 (400)
T cd05105 263 LAARNVLLA----QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDN--LYTTLSDVWSYGILLWEIFSLG 336 (400)
T ss_pred CChHhEEEe----CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCC--CCCchhhHHHHHHHHHHHHHCC
Confidence 999999998 67789999999987543221 12234577889999998754 57899999999999999997 9
Q ss_pred CCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1083 EEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1083 k~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
..||........+...+....++..+..+++++.+||.+||+.||++||++.+|.+.|..+.
T Consensus 337 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 337 GTPYPGMIVDSTFYNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred CCCCcccchhHHHHHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 99998766554444444455555667788999999999999999999999999999998764
No 149
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.5e-37 Score=326.02 Aligned_cols=258 Identities=30% Similarity=0.553 Sum_probs=212.6
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEECC-------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeE
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWRG-------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVA 942 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~kG-------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVk 942 (1157)
.+...+|++.+.||+|+||.||++.+.+ ..+|+|.+.... . ......+.+|+.+++++ +||||++
T Consensus 8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-----~--~~~~~~~~~E~~~l~~l~~h~~i~~ 80 (293)
T cd05053 8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-----T--EKDLSDLVSEMEMMKMIGKHKNIIN 80 (293)
T ss_pred ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-----C--HHHHHHHHHHHHHHHhhcCCCCeee
Confidence 4556789999999999999999998742 458999887531 1 11245688999999999 8999999
Q ss_pred EeeeeecCCCCcEEEEEEeecCCcchhhhcc---------------ccccccHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 001103 943 FYGVVPNGPGGTMATVTEYMVNGSLRHVLAR---------------KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDL 1007 (1157)
Q Consensus 943 Lygvf~de~~~~LyLVMEYmeGGSL~dlLkr---------------~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDL 1007 (1157)
+++++.. .+.++++|||+.+++|..++.. ..+.+++..++.++.|++.||.|||+++|+||||
T Consensus 81 ~~~~~~~--~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dl 158 (293)
T cd05053 81 LLGVCTQ--EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDL 158 (293)
T ss_pred EEEEEcC--CCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCcccccc
Confidence 9999876 5679999999999999998853 2356889999999999999999999999999999
Q ss_pred CccceeeccCCCCCCeEEEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CC
Q 001103 1008 KCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GE 1083 (1157)
Q Consensus 1008 KPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk 1083 (1157)
||+|||++ .++.+||+|||+++....... .....++..|+|||++.+. .++.++|||||||++|+|++ |.
T Consensus 159 kp~Nil~~----~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~ 232 (293)
T cd05053 159 AARNVLVT----EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDR--VYTHQSDVWSFGVLLWEIFTLGG 232 (293)
T ss_pred ceeeEEEc----CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccC--CcCcccceeehhhHHHHHhcCCC
Confidence 99999998 677999999999976443221 1222356789999998754 57899999999999999997 99
Q ss_pred CCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1084 EPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1084 ~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.||......+....+.. ......+..++..+.+|+.+||..||.+|||+.++++.|..+.
T Consensus 233 ~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 233 SPYPGIPVEELFKLLKE-GYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred CCCCCCCHHHHHHHHHc-CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 99998777666655543 3444567778999999999999999999999999999998764
No 150
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.7e-37 Score=322.79 Aligned_cols=254 Identities=34% Similarity=0.582 Sum_probs=209.8
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECC-ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRG-TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kG-t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
+...+|++.++||+|+||.||+|++.+ ..||+|+++.... ....+.+|+++++.++||||+++++.+..
T Consensus 3 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~---------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~- 72 (262)
T cd05071 3 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM---------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE- 72 (262)
T ss_pred CChHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc---------CHHHHHHHHHHHHhCCCCCcceEEEEECC-
Confidence 455689999999999999999998854 4699998875321 12467889999999999999999998744
Q ss_pred CCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
...++||||+.+++|.+++.+. +..+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+||
T Consensus 73 --~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~----~~~~~~L~df 146 (262)
T cd05071 73 --EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG----ENLVCKVADF 146 (262)
T ss_pred --CCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc----CCCcEEeccC
Confidence 3578999999999999999753 34578899999999999999999999999999999999998 6778999999
Q ss_pred CCcccccCCcc--cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCC
Q 001103 1030 GLSRIKCNTLV--SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1030 GLAkl~~~~~~--sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpe 1106 (1157)
|++........ .....++..|+|||.+.+. .++.++|+|||||++|+|++ |+.||...........+... ....
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~ 223 (262)
T cd05071 147 GLARLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG-YRMP 223 (262)
T ss_pred CceeeccccccccccCCcccceecCHhHhccC--CCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcC-CCCC
Confidence 99875433221 1223467789999998744 57899999999999999999 89999887766666555433 3334
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.+..+++.+.+||.+||+.+|++||++.++++.|+.+.
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~~ 261 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYF 261 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHhc
Confidence 56678999999999999999999999999999998763
No 151
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.2e-37 Score=321.42 Aligned_cols=253 Identities=35% Similarity=0.623 Sum_probs=209.1
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--C---ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--G---TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--G---t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
.+|++.+.||+|+||.||+|+++ + ..||||+++... .......+..|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~ 76 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY-------TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK 76 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC-------CHHHHHHHHHHHHHHHhCCCcCcceEEEEECC
Confidence 57899999999999999999874 2 249999886531 12234678899999999999999999999876
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
....++||||+.+++|.+++....+.+++..++.++.|++.||.|||++|++||||||+|||++ .++.+||+||
T Consensus 77 --~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~----~~~~~kl~df 150 (269)
T cd05065 77 --SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN----SNLVCKVSDF 150 (269)
T ss_pred --CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc----CCCcEEECCC
Confidence 5678999999999999999977666689999999999999999999999999999999999998 6778999999
Q ss_pred CCcccccCCcc----cCCC--CCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcC
Q 001103 1030 GLSRIKCNTLV----SGGV--RGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNT 1102 (1157)
Q Consensus 1030 GLAkl~~~~~~----sts~--~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~ 1102 (1157)
|++........ .... ..+..|+|||.+.+. .++.++|||||||++|||++ |..||...........+. ..
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~-~~ 227 (269)
T cd05065 151 GLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYR--KFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIE-QD 227 (269)
T ss_pred ccccccccCccccccccccCCCcceeecCHhHhccC--cccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cC
Confidence 99875432211 1111 124579999998754 57899999999999999886 999998877766666554 33
Q ss_pred CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1103 LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1103 lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.+...+..++..+.+++.+||+.+|.+||++++++..|..+
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 44455667899999999999999999999999999988754
No 152
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.5e-37 Score=329.51 Aligned_cols=261 Identities=29% Similarity=0.512 Sum_probs=212.5
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEECC---------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCce
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWRG---------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNV 940 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~kG---------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNI 940 (1157)
.+...+|.+.+.||+|+||.||++++.+ ..+|+|.++... . ......+.+|+.+++.+ +||||
T Consensus 14 ~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~----~---~~~~~~~~~e~~~l~~l~~h~~i 86 (307)
T cd05098 14 EVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA----T---EKDLSDLISEMEMMKMIGKHKNI 86 (307)
T ss_pred eeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC----C---hHHHHHHHHHHHHHHHhcCCCCE
Confidence 3445689999999999999999998632 359999887531 1 11245688899999999 79999
Q ss_pred eEEeeeeecCCCCcEEEEEEeecCCcchhhhcccc---------------ccccHHHHHHHHHHHHHHHHHHHHCCceec
Q 001103 941 VAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHF 1005 (1157)
Q Consensus 941 VkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHR 1005 (1157)
+++++++.. ....|+||||+.+++|.+++.... ..+++..++.++.|++.||+|||++|++||
T Consensus 87 ~~~~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~ 164 (307)
T cd05098 87 INLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHR 164 (307)
T ss_pred eeEEEEEec--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccc
Confidence 999999877 568899999999999999986532 347888999999999999999999999999
Q ss_pred cCCccceeeccCCCCCCeEEEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-
Q 001103 1006 DLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT- 1081 (1157)
Q Consensus 1006 DLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT- 1081 (1157)
||||+|||++ .++.+||+|||++........ .....++..|+|||++.+. .++.++|+|||||++|+|++
T Consensus 165 dlkp~Nill~----~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~el~~~ 238 (307)
T cd05098 165 DLAARNVLVT----EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVWSFGVLLWEIFTL 238 (307)
T ss_pred cccHHheEEc----CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccC--CCCcHHHHHHHHHHHHHHHcC
Confidence 9999999998 667899999999875432211 1112345689999998754 57899999999999999998
Q ss_pred CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1082 GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1082 Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
|..||...........+. .......+..++.++.+||.+||..+|.+|||+.++++.|..+....
T Consensus 239 g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 239 GGSPYPGVPVEELFKLLK-EGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred CCCCCCcCCHHHHHHHHH-cCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 899998776655555443 34445667778999999999999999999999999999999987653
No 153
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-38 Score=360.53 Aligned_cols=254 Identities=22% Similarity=0.377 Sum_probs=228.4
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
-|...+.||+|.|.+|.++++ .|..||||++.+..+.. .....+.+|++.|+.++|||||++|.++.. ..
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~------~st~hlfqEVRCMKLVQHpNiVRLYEViDT--QT 90 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDT------LSTGHLFQEVRCMKLVQHPNIVRLYEVIDT--QT 90 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccch------hhhhHHHHHHHHHHHhcCcCeeeeeehhcc--cc
Confidence 466678899999999999987 79999999999875432 234678899999999999999999999877 66
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.+|||+|+-++|+|.++|.++...+.+....+++.||+.|+.|+|+..+|||||||+||.+. ++.|.|||+|||++-
T Consensus 91 KlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF---EKlGlVKLTDFGFSN 167 (864)
T KOG4717|consen 91 KLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF---EKLGLVKLTDFGFSN 167 (864)
T ss_pred eEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe---eecCceEeeeccccc
Confidence 89999999999999999999988899999999999999999999999999999999999987 477899999999998
Q ss_pred cccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcH
Q 001103 1034 IKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDP 1113 (1157)
Q Consensus 1034 l~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSp 1113 (1157)
...+.....+.||+..|.|||++.|..|. .+++||||||||||.|++|++||+..+.-+.+-.|++-.+. +|..++.
T Consensus 168 kf~PG~kL~TsCGSLAYSAPEILLGDsYD-APAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt--vPshvS~ 244 (864)
T KOG4717|consen 168 KFQPGKKLTTSCGSLAYSAPEILLGDSYD-APAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT--VPSHVSK 244 (864)
T ss_pred cCCCcchhhcccchhhccCchhhhcCccC-CcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc--CchhhhH
Confidence 77777777789999999999999986443 46799999999999999999999999999999999877664 7888999
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1114 EWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1114 eLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
+.++||..||..||.+|.|.++|...-|..
T Consensus 245 eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq 274 (864)
T KOG4717|consen 245 ECRDLIQSMLVRDPKKRASLEEIVSTSWLQ 274 (864)
T ss_pred HHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence 999999999999999999999999887653
No 154
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=8.6e-39 Score=339.10 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=226.4
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
...++|++.+.||+|.||.||+|+.+ +-.||+|++.+..+ .......++.+|++|-..|+||||+++|++|.+
T Consensus 19 ~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi-----~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd 93 (281)
T KOG0580|consen 19 WTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQI-----LKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD 93 (281)
T ss_pred cchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHH-----HHhcchhhhhheeEeecccCCccHHhhhhheec
Confidence 34578999999999999999999985 44599999988642 223345789999999999999999999999998
Q ss_pred CCCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
....|+++||...|+|+..|... ...+++.....++.|++.||.|+|.++||||||||+|+|++ ..+.+||+|
T Consensus 94 --~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg----~~~~lkiAd 167 (281)
T KOG0580|consen 94 --SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLG----SAGELKIAD 167 (281)
T ss_pred --cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccC----CCCCeeccC
Confidence 66899999999999999999743 34589999999999999999999999999999999999999 778999999
Q ss_pred cCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC
Q 001103 1029 FGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP 1108 (1157)
Q Consensus 1029 FGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip 1108 (1157)
||.+.... .....+.|||..|.+||...+. .++..+|+|++|++.||++.|.+||......+.+++|..-.+ .+|
T Consensus 168 fGwsV~~p-~~kR~tlcgt~dyl~pEmv~~~--~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~--~~p 242 (281)
T KOG0580|consen 168 FGWSVHAP-SNKRKTLCGTLDYLPPEMVEGR--GHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDL--KFP 242 (281)
T ss_pred CCceeecC-CCCceeeecccccCCHhhcCCC--CccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccc--cCC
Confidence 99997654 3444568999999999999865 568999999999999999999999999998899998876544 467
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
..++...+++|.+||.++|.+|.+..++++++|...
T Consensus 243 ~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a 278 (281)
T KOG0580|consen 243 STISGGAADLISRLLVKNPIERLALTEVMDHPWIVA 278 (281)
T ss_pred cccChhHHHHHHHHhccCccccccHHHHhhhHHHHh
Confidence 889999999999999999999999999999999765
No 155
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=3.7e-37 Score=320.01 Aligned_cols=253 Identities=31% Similarity=0.499 Sum_probs=203.0
Q ss_pred eEEEEecccCcEEEEEEEECCc----eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC--
Q 001103 878 EELQELGSGTFGTVYRGKWRGT----DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP-- 951 (1157)
Q Consensus 878 eILrkLGsGsFGtVYlAr~kGt----~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~-- 951 (1157)
.+.+.||+|+||.||+|++... .+|+|.++.... .......+.+|+++++.++||||+++++.+....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 75 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAIC------TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVES 75 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcC------CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcc
Confidence 4568899999999999988532 489998765311 1222467889999999999999999998764321
Q ss_pred --CCcEEEEEEeecCCcchhhhcc-----ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 952 --GGTMATVTEYMVNGSLRHVLAR-----KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 952 --~~~LyLVMEYmeGGSL~dlLkr-----~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
....+++|||+.+|+|..++.. ....+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+
T Consensus 76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~----~~~~~ 151 (272)
T cd05075 76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN----ENMNV 151 (272)
T ss_pred cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc----CCCCE
Confidence 2357899999999999887632 234588999999999999999999999999999999999998 67789
Q ss_pred EEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhh
Q 001103 1025 KVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILS 1100 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~ 1100 (1157)
||+|||+++....... .....+++.|+|||.+.+. .++.++|||||||++|+|++ |+.||...........+..
T Consensus 152 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~ 229 (272)
T cd05075 152 CVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADR--VYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQ 229 (272)
T ss_pred EECCCCcccccCcccceecCCcccCCcccCCHHHccCC--CcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence 9999999886433221 1223467789999998753 57899999999999999999 8999988776666555544
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1101 NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1101 ~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.. ....+..++..++++|.+||+.||.+|||+.+|++.|..+
T Consensus 230 ~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 230 GN-RLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CC-CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 33 3345667889999999999999999999999999998764
No 156
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=3.3e-37 Score=325.98 Aligned_cols=254 Identities=31% Similarity=0.545 Sum_probs=208.4
Q ss_pred CeeEEEEecccCcEEEEEEEECC-------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 876 DLEELQELGSGTFGTVYRGKWRG-------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~kG-------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
+|++.+.||+|+||.||+|+... ..+|+|.+..... ......+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 73 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENAS-------SSELRDLLSEFNLLKQVNHPHVIKLYGACS 73 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCC-------HHHHHHHHHHHHHHhhCCCCCEeeEEEEEe
Confidence 47788999999999999998732 3488888765321 122467889999999999999999999987
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccc-----------------------cccccHHHHHHHHHHHHHHHHHHHHCCceec
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARK-----------------------DRILDRRKKLMLMMDAAFGMEYLHMKNIVHF 1005 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~-----------------------gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHR 1005 (1157)
. .+..+++|||+.+++|.+++... ...+++..++.++.|++.||+|||+++|+||
T Consensus 74 ~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~ 151 (290)
T cd05045 74 Q--DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHR 151 (290)
T ss_pred c--CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehh
Confidence 7 56789999999999999887532 1347888999999999999999999999999
Q ss_pred cCCccceeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-
Q 001103 1006 DLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT- 1081 (1157)
Q Consensus 1006 DLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT- 1081 (1157)
||||+|||++ +++.+||+|||++....... ......++..|+|||.+.+. .++.++||||||+++|+|++
T Consensus 152 dikp~nill~----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slG~~l~el~t~ 225 (290)
T cd05045 152 DLAARNVLVA----EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDH--IYTTQSDVWSFGVLLWEIVTL 225 (290)
T ss_pred hhhhheEEEc----CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccC--CcchHhHHHHHHHHHHHHHhc
Confidence 9999999998 67789999999987532221 12223467789999988654 57899999999999999998
Q ss_pred CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1082 GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1082 Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
|..||.+.........+ ........+..++.++.+||.+||+.+|.+||++.++++.|+.+..
T Consensus 226 g~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 226 GGNPYPGIAPERLFNLL-KTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred CCCCCCCCCHHHHHHHH-hCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 99999887766655544 3444555677889999999999999999999999999999998764
No 157
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=3e-38 Score=342.15 Aligned_cols=246 Identities=24% Similarity=0.349 Sum_probs=200.2
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHH-HHHhCCCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAH-IISNLHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIk-ILK~L~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||+||++++ .|+.||||++.+..... ......+.+|.. +++.++||||+++++.+.. .+.+|+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-----~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~--~~~~~l 73 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN-----RKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT--TEKLYF 73 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-----hhHHHHHHHHHHHHHHhCCCCCCccEEEEEec--CCEEEE
Confidence 3699999999999988 47789999997642211 112234455554 5778999999999999887 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+.+++|..++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 74 v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~----~~~~~kL~DfG~~~~~~~ 148 (325)
T cd05604 74 VLDFVNGGELFFHLQRE-RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD----SQGHVVLTDFGLCKEGIA 148 (325)
T ss_pred EEcCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC----CCCCEEEeecCCcccCCC
Confidence 99999999998888654 4589999999999999999999999999999999999998 67799999999987532
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
........+||+.|+|||++.+. .++.++|||||||++|+|++|+.||......+....+..... .++...+..+.
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 224 (325)
T cd05604 149 QSDTTTTFCGTPEYLAPEVIRKQ--PYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPL--VLRPGASLTAW 224 (325)
T ss_pred CCCCcccccCChhhCCHHHHcCC--CCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCc--cCCCCCCHHHH
Confidence 22233456799999999999754 578899999999999999999999998877777776665433 34556889999
Q ss_pred HHHHHHhccCCCCCCCH----HHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSF----TEITNRLRV 1142 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSa----eELLe~Lr~ 1142 (1157)
++|.+||+.+|.+||++ .+++++.+.
T Consensus 225 ~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f 254 (325)
T cd05604 225 SILEELLEKDRQRRLGAKEDFLEIQEHPFF 254 (325)
T ss_pred HHHHHHhccCHHhcCCCCCCHHHHhcCCCc
Confidence 99999999999999977 467666443
No 158
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.4e-38 Score=342.94 Aligned_cols=247 Identities=23% Similarity=0.344 Sum_probs=201.1
Q ss_pred ecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC---CCCceeEEeeeeecCCCCcEEE
Q 001103 883 LGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL---HHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 883 LGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L---~HPNIVkLygvf~de~~~~LyL 957 (1157)
||+|+||+||+++++ +..||||++.+..... ......+..|..++..+ .||+|+++++.+.. ...+|+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-----~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~--~~~~~l 73 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVA-----KKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT--DSDLYL 73 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhh-----hhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec--CCeEEE
Confidence 799999999999884 7789999997642211 11234455677777665 69999999999987 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+.+|+|..++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||++....
T Consensus 74 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~----~~~~~kl~Dfg~a~~~~~ 148 (330)
T cd05586 74 VTDYMSGGELFWHLQKE-GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD----ATGHIALCDFGLSKANLT 148 (330)
T ss_pred EEcCCCCChHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC----CCCCEEEecCCcCcCCCC
Confidence 99999999999888654 4589999999999999999999999999999999999998 67789999999987532
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
........+||+.|+|||++.+. ..++.++|||||||++|+|++|+.||........+..+........ ...++++++
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~ 226 (330)
T cd05586 149 DNKTTNTFCGTTEYLAPEVLLDE-KGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFP-KNVLSDEGR 226 (330)
T ss_pred CCCCccCccCCccccCHHHHcCC-CCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCC-CccCCHHHH
Confidence 22233456799999999998753 3468899999999999999999999998877777666655443322 234789999
Q ss_pred HHHHHHhccCCCCCC----CHHHHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARP----SFTEITNRLRVM 1143 (1157)
Q Consensus 1117 dLIkrCLqkDPskRP----SaeELLe~Lr~L 1143 (1157)
+||.+||..||.+|| ++.+++++.+..
T Consensus 227 ~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~ 257 (330)
T cd05586 227 QFVKGLLNRNPQHRLGAHRDAVELKEHPFFA 257 (330)
T ss_pred HHHHHHcCCCHHHCCCCCCCHHHHhcCcccc
Confidence 999999999999998 789999987653
No 159
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=2e-37 Score=321.44 Aligned_cols=253 Identities=34% Similarity=0.595 Sum_probs=210.7
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEE-CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKW-RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~-kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
.+...+|+++++||+|+||.||+|.. .++.||+|.+..... ....+.+|+.++++++||||+++++++..
T Consensus 2 ~~~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~ 72 (260)
T cd05067 2 EVPRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM---------SPEAFLAEANLMKQLQHPRLVRLYAVVTQ 72 (260)
T ss_pred ccchHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC---------cHHHHHHHHHHHHhcCCcCeeeEEEEEcc
Confidence 35567899999999999999999987 467799998875421 12467889999999999999999998743
Q ss_pred CCCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
...+++|||+.+++|.+++... +..+++..++.++.|++.||+|||++|++||||||+||+++ .++.++|+|
T Consensus 73 ---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~----~~~~~~l~d 145 (260)
T cd05067 73 ---EPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS----ETLCCKIAD 145 (260)
T ss_pred ---CCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc----CCCCEEEcc
Confidence 4689999999999999988653 45688999999999999999999999999999999999998 677899999
Q ss_pred cCCcccccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1029 FGLSRIKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1029 FGLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
||++....... ......++..|+|||.+.+. .++.++||||||+++|+|++ |++||.+.........+. .....
T Consensus 146 fg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~ 222 (260)
T cd05067 146 FGLARLIEDNEYTAREGAKFPIKWTAPEAINYG--TFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLE-RGYRM 222 (260)
T ss_pred CcceeecCCCCcccccCCcccccccCHHHhccC--CcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHH-cCCCC
Confidence 99987544222 12234467789999998754 46889999999999999998 999998877666555543 34445
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
..+...+.++.++|.+||..+|++||+++++++.|+.
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 223 PRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 5677788999999999999999999999999999874
No 160
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.8e-37 Score=349.16 Aligned_cols=248 Identities=23% Similarity=0.316 Sum_probs=196.8
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+...+|++++.||+|+||.||++++ .++.||||+... ..+.+|++++++|+|||||++++++..
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~--------------~~~~~E~~il~~l~HpnIv~~~~~~~~ 154 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR--------------GGTATEAHILRAINHPSIIQLKGTFTY 154 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh--------------hhhHHHHHHHHhCCCCCCCCEeEEEEE
Confidence 4556899999999999999999988 467799996432 345689999999999999999999987
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
....++|||++. ++|..++... +.+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+||
T Consensus 155 --~~~~~lv~e~~~-~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~----~~~~vkL~DF 226 (391)
T PHA03212 155 --NKFTCLILPRYK-TDLYCYLAAK-RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN----HPGDVCLGDF 226 (391)
T ss_pred --CCeeEEEEecCC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc----CCCCEEEEeC
Confidence 567899999995 5888887654 3588999999999999999999999999999999999998 6778999999
Q ss_pred CCcccccCC--cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-------hhHHHHHhhh
Q 001103 1030 GLSRIKCNT--LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH-------CGAIIGGILS 1100 (1157)
Q Consensus 1030 GLAkl~~~~--~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~-------~eeil~~Il~ 1100 (1157)
|++...... ......+||+.|+|||++.+. .++.++|||||||+||||++|+.||.... ....+..+..
T Consensus 227 G~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~ 304 (391)
T PHA03212 227 GAACFPVDINANKYYGWAGTIATNAPELLARD--PYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIR 304 (391)
T ss_pred CcccccccccccccccccCccCCCChhhhcCC--CCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHH
Confidence 999753221 223346799999999999754 57899999999999999999998875321 1111111111
Q ss_pred c--------------------------CCC-C-CCC-----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1101 N--------------------------TLR-P-QIP-----ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1101 ~--------------------------~lr-p-eip-----~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
. ... + ..+ ..++.++.+||.+||++||.+|||+++++++.+..
T Consensus 305 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~ 380 (391)
T PHA03212 305 RSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQ 380 (391)
T ss_pred HhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhc
Confidence 0 000 0 000 12466899999999999999999999999998863
No 161
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=8.4e-38 Score=340.02 Aligned_cols=246 Identities=22% Similarity=0.370 Sum_probs=200.1
Q ss_pred EEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||+||+++.. ++.||+|++++.... .......+.+|+.+++++ +||+|+++++++.. ...+|+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~l 73 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVH-----DDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT--TSRLFL 73 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe--CCEEEE
Confidence 36999999999999884 567999999865221 122346678899999888 69999999999887 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC- 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~- 1036 (1157)
||||+++++|..++.+. +.+++..++.++.||+.||+|||++||+||||||+|||++ .++.+||+|||+++...
T Consensus 74 v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~----~~~~~kl~Dfg~~~~~~~ 148 (327)
T cd05617 74 VIEYVNGGDLMFHMQRQ-RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD----ADGHIKLTDYGMCKEGLG 148 (327)
T ss_pred EEeCCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe----CCCCEEEeccccceeccC
Confidence 99999999998888654 3589999999999999999999999999999999999998 67789999999987532
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC------hh-HHHHHhhhcCCCCCCCC
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH------CG-AIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~------~e-eil~~Il~~~lrpeip~ 1109 (1157)
........+||+.|+|||++.+. .++.++|||||||+||+|++|+.||.... .. .....+... +..++.
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~~p~ 224 (327)
T cd05617 149 PGDTTSTFCGTPNYIAPEILRGE--EYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK--PIRIPR 224 (327)
T ss_pred CCCceecccCCcccCCHHHHCCC--CCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC--CCCCCC
Confidence 22233456799999999999754 57899999999999999999999996421 11 222333322 345677
Q ss_pred CCcHHHHHHHHHHhccCCCCCCC------HHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPS------FTEITNRLRV 1142 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPS------aeELLe~Lr~ 1142 (1157)
.+++.+.++|.+||.+||.+|++ +.+++++.+.
T Consensus 225 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f 263 (327)
T cd05617 225 FLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFF 263 (327)
T ss_pred CCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCC
Confidence 88999999999999999999987 5688887543
No 162
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.4e-37 Score=320.39 Aligned_cols=252 Identities=34% Similarity=0.599 Sum_probs=208.6
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECC-ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRG-TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kG-t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
+...+|++.+.||+|+||.||++.+.+ ..+|+|++..... ....+.+|+++++.++|||++++++++..
T Consensus 3 ~~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~---------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 72 (260)
T cd05069 3 IPRESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM---------MPEAFLQEAQIMKKLRHDKLVPLYAVVSE- 72 (260)
T ss_pred CChHHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc---------cHHHHHHHHHHHHhCCCCCeeeEEEEEcC-
Confidence 445679999999999999999998854 4699998764311 12457789999999999999999998754
Q ss_pred CCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
...+++|||+.+++|.+++.+. ...+++..+..++.|++.||.|||++||+|+||||+|||++ +++.+||+||
T Consensus 73 --~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~----~~~~~~l~df 146 (260)
T cd05069 73 --EPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG----DNLVCKIADF 146 (260)
T ss_pred --CCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc----CCCeEEECCC
Confidence 3578999999999999998653 34578899999999999999999999999999999999998 6788999999
Q ss_pred CCcccccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCC
Q 001103 1030 GLSRIKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1030 GLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpe 1106 (1157)
|++....... ......++..|+|||.+.+. .++.++|+||||+++|+|++ |+.||.+.........+.. .....
T Consensus 147 g~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~ 223 (260)
T cd05069 147 GLARLIEDNEYTARQGAKFPIKWTAPEAALYG--RFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVER-GYRMP 223 (260)
T ss_pred ccceEccCCcccccCCCccchhhCCHHHhccC--CcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCC
Confidence 9997543322 11223467789999998753 57899999999999999999 9999998777666655543 34445
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.+...+..+++||.+||.+||.+||+++++++.|+.
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 667789999999999999999999999999999875
No 163
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=4.1e-37 Score=318.89 Aligned_cols=255 Identities=25% Similarity=0.448 Sum_probs=210.3
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCC-ChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGR-SSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r-~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.|.+...||+|+||.||+|.+ .++.+|+|++........ ........+.+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 78 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD--A 78 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe--C
Confidence 366778999999999999987 467899998876533222 22233455778899999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...+++|||+++++|.+++.+. +.+++..+..++.|++.||.|||++|++||||||+|||++ ..+.+||+|||++
T Consensus 79 ~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~----~~~~~~l~dfg~~ 153 (267)
T cd06628 79 DHLNIFLEYVPGGSVAALLNNY-GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD----NKGGIKISDFGIS 153 (267)
T ss_pred CccEEEEEecCCCCHHHHHHhc-cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc----CCCCEEecccCCC
Confidence 6889999999999999999754 4588899999999999999999999999999999999998 7778999999998
Q ss_pred ccccCCc-------ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1033 RIKCNTL-------VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1033 kl~~~~~-------~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
+...... ......|+..|+|||.+.+. .++.++|+|||||++|+|++|+.||........+..+.. ...+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~ 230 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQT--SYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE-NASP 230 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccC--CCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc-cCCC
Confidence 7543211 11234588999999998754 568899999999999999999999987765555444433 4455
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
.++..++..++++|.+||+.||.+||++.+++++.
T Consensus 231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~ 265 (267)
T cd06628 231 EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHP 265 (267)
T ss_pred cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCC
Confidence 67778899999999999999999999999999864
No 164
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=4.1e-37 Score=319.90 Aligned_cols=256 Identities=27% Similarity=0.401 Sum_probs=210.4
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||.||++++ .+..||||++...... .........+.+|+++++++.||||+++++++.+...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 78 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPES---PETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPME 78 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCC---cccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCC
Confidence 4789999999999999999987 4678999988643211 1112235678899999999999999999999877555
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++++|||+++++|.+++.+.. .+++..++.++.|++.||+|||+++|+|+||||+|||++ ..+.+||+|||++
T Consensus 79 ~~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~----~~~~~~l~Dfg~~ 153 (265)
T cd06652 79 RTLSIFMEHMPGGSIKDQLKSYG-ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD----SVGNVKLGDFGAS 153 (265)
T ss_pred ceEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec----CCCCEEECcCccc
Confidence 67899999999999999987553 478888999999999999999999999999999999998 6778999999998
Q ss_pred ccccCC----cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC
Q 001103 1033 RIKCNT----LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP 1108 (1157)
Q Consensus 1033 kl~~~~----~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip 1108 (1157)
...... .......|+..|+|||.+.+. .++.++|+|||||++|+|++|+.||........+..+......+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 231 (265)
T cd06652 154 KRLQTICLSGTGMKSVTGTPYWMSPEVISGE--GYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPVLP 231 (265)
T ss_pred cccccccccccccccCCCCccccChhhhcCC--CCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCCCCc
Confidence 753321 112235689999999998754 57889999999999999999999998776555555555444455667
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
...+..+.++|.+||. +|.+||++++++++.+
T Consensus 232 ~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~ 263 (265)
T cd06652 232 PHVSDHCRDFLKRIFV-EAKLRPSADELLRHTF 263 (265)
T ss_pred hhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcc
Confidence 7788899999999995 9999999999998754
No 165
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.2e-37 Score=323.54 Aligned_cols=254 Identities=24% Similarity=0.390 Sum_probs=206.2
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~ 951 (1157)
..|++.+.||+|+||.||+|++ .++.||+|++.... . ....+.+|+.+++++ +||||+++++.+....
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~-----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 76 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG----D-----EEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 76 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC----c-----cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecC
Confidence 4677888999999999999988 46679999987541 1 124567899999998 7999999999986532
Q ss_pred ----CCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 952 ----GGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 952 ----~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
...+|++|||+.+++|.+++... ...+++..+..++.|++.||.|||+++|+||||||+||+++ .++.+||
T Consensus 77 ~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~----~~~~~~l 152 (272)
T cd06637 77 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT----ENAEVKL 152 (272)
T ss_pred CCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC----CCCCEEE
Confidence 24689999999999999998763 35688999999999999999999999999999999999998 6778999
Q ss_pred EecCCcccccCC-cccCCCCCCCcccCcccccCC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC
Q 001103 1027 GDFGLSRIKCNT-LVSGGVRGTLPWMAPELLNGS---NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT 1102 (1157)
Q Consensus 1027 iDFGLAkl~~~~-~~sts~~GTp~YmAPEVL~G~---~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~ 1102 (1157)
+|||++...... .......|+..|+|||++.+. ...++.++|+|||||++|+|++|+.||...........+....
T Consensus 153 ~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~~~ 232 (272)
T cd06637 153 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP 232 (272)
T ss_pred ccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhcCC
Confidence 999998754322 223346799999999998632 2357889999999999999999999998766554444443333
Q ss_pred CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+......++.++++||.+||..+|.+|||+.+++++.|
T Consensus 233 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 271 (272)
T cd06637 233 APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPF 271 (272)
T ss_pred CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCC
Confidence 333344567899999999999999999999999998754
No 166
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=1.8e-37 Score=339.56 Aligned_cols=262 Identities=29% Similarity=0.509 Sum_probs=210.7
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEE-------CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCcee
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKW-------RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVV 941 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~-------kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIV 941 (1157)
|.+..++|++.+.||+|+||+||+|.+ .++.||||+++.... ......+.+|+.++.++ +||||+
T Consensus 2 ~~~~~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~~h~niv 74 (343)
T cd05103 2 WEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT-------HSEHRALMSELKILIHIGHHLNVV 74 (343)
T ss_pred cccchhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC-------hHHHHHHHHHHHHHHhccCCccHh
Confidence 345667899999999999999999975 256799999875311 11245688899999999 689999
Q ss_pred EEeeeeecCCCCcEEEEEEeecCCcchhhhcccc----------------------------------------------
Q 001103 942 AFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------------------------------------- 975 (1157)
Q Consensus 942 kLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------------------------------------- 975 (1157)
++++++... ...++++|||+++|+|.+++....
T Consensus 75 ~~~~~~~~~-~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (343)
T cd05103 75 NLLGACTKP-GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFV 153 (343)
T ss_pred hhcceeecC-CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccccccccccccc
Confidence 999987653 457899999999999998875421
Q ss_pred --------------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccc
Q 001103 976 --------------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 976 --------------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~ 1035 (1157)
..+++..+..++.|++.||.|||+++|+||||||+|||++ .++.+||+|||++...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~----~~~~~kl~dfg~~~~~ 229 (343)
T cd05103 154 EEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS----ENNVVKICDFGLARDI 229 (343)
T ss_pred CCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc----CCCcEEEEeccccccc
Confidence 2367788899999999999999999999999999999998 6779999999998753
Q ss_pred cCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1036 CNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1036 ~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
.... ......++..|+|||.+.+. .++.++||||||+++|+|++ |..||........+............+...
T Consensus 230 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (343)
T cd05103 230 YKDPDYVRKGDARLPLKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYT 307 (343)
T ss_pred ccCcchhhcCCCCCCcceECcHHhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCCCCCC
Confidence 2221 11223356789999998754 57899999999999999997 999998765444444444444455566678
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
++++.+++..||+.||.+|||+.+|+++|..+..
T Consensus 308 ~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 308 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 8999999999999999999999999999998764
No 167
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=2.1e-37 Score=321.07 Aligned_cols=257 Identities=21% Similarity=0.423 Sum_probs=209.6
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||.||++++ .+..+|||.+...... .......+.+|+.+++.++||||+++++.+.. .
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~-----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~ 74 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLM-----DAKARADCIKEIDLLKQLNHPNVIKYYASFIE--D 74 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhh-----hHHHHHHHHHHHHHHHHccCCchhhhhheeEe--C
Confidence 4688889999999999999987 5778999988754211 12234678899999999999999999999887 5
Q ss_pred CcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 953 GTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
+..+++|||+++++|.+++.. ....+++..++.++.|++.||.|||++||+|+||||+|||++ .++.++|+||
T Consensus 75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~----~~~~~~l~df 150 (267)
T cd08229 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT----ATGVVKLGDL 150 (267)
T ss_pred CeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc----CCCCEEECcc
Confidence 688999999999999988863 234588999999999999999999999999999999999998 6678999999
Q ss_pred CCcccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--hHHHHHhhhcCCCCC
Q 001103 1030 GLSRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC--GAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1030 GLAkl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~--eeil~~Il~~~lrpe 1106 (1157)
|++....... ......|+..|+|||.+.+. .++.++|+||||+++|+|++|..||..... ......+.....++.
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 228 (267)
T cd08229 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPL 228 (267)
T ss_pred hhhhccccCCcccccccCCcCccCHHHhcCC--CccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCC
Confidence 9987543322 22345789999999998754 568899999999999999999999975443 233333333333333
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.+...++++++||.+||..||.+|||+.+|++.+..+.
T Consensus 229 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 229 PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 34567889999999999999999999999999988764
No 168
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-37 Score=342.80 Aligned_cols=248 Identities=23% Similarity=0.355 Sum_probs=195.7
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+...+|++++.||+|+||.||+|++. +..||+|+..+. ....|+.++++++||||+++++++..
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------------~~~~E~~~l~~l~h~~iv~~~~~~~~ 128 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------------TTLIEAMLLQNVNHPSVIRMKDTLVS 128 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------------ccHHHHHHHHhCCCCCCcChhheEEe
Confidence 34468999999999999999999985 456999975432 22468999999999999999999987
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
....++||||+. ++|..++......+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+||
T Consensus 129 --~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~----~~~~~kl~Df 201 (357)
T PHA03209 129 --GAITCMVLPHYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN----DVDQVCIGDL 201 (357)
T ss_pred --CCeeEEEEEccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC----CCCCEEEecC
Confidence 567899999995 588888877667799999999999999999999999999999999999998 6778999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCC-CCCCChh---------HHHHHhh
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEP-YANMHCG---------AIIGGIL 1099 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~P-F~g~~~e---------eil~~Il 1099 (1157)
|++.............||+.|+|||++.+. .++.++|||||||++|||+++..| |...... ..+..+.
T Consensus 202 G~a~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~ 279 (357)
T PHA03209 202 GAAQFPVVAPAFLGLAGTVETNAPEVLARD--KYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKII 279 (357)
T ss_pred ccccccccCcccccccccccccCCeecCCC--CCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHH
Confidence 999764444444456799999999999754 578999999999999999985544 4332111 1111111
Q ss_pred hc--CCCCCCC------------------------------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1100 SN--TLRPQIP------------------------------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1100 ~~--~lrpeip------------------------------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.. ..+..++ ..++.++.+||.+||+.||.+|||+.+++++.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f 354 (357)
T PHA03209 280 STLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMF 354 (357)
T ss_pred HHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchh
Confidence 10 0000111 1346677889999999999999999999999875
No 169
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=5.3e-37 Score=323.98 Aligned_cols=257 Identities=30% Similarity=0.549 Sum_probs=208.8
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEE--CCce----EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKW--RGTD----IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYG 945 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~--kGt~----VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLyg 945 (1157)
+...+|++++.||+|+||+||+|.+ .+.. +++|.+... ........+..|+.+++++.||||+++++
T Consensus 4 ~~~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-------~~~~~~~~~~~~~~~l~~l~h~~iv~~~~ 76 (279)
T cd05111 4 LKETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-------SGRQTFQEITDHMLAMGSLDHAYIVRLLG 76 (279)
T ss_pred CCHhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-------cchHHHHHHHHHHHHHhcCCCCCcceEEE
Confidence 4557899999999999999999998 3544 555554321 11223456778888999999999999999
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEE
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
++.. ...+++|||+.+|+|.+++....+.+++..++.++.|++.||.|||+++++||||||+|||++ .++.+|
T Consensus 77 ~~~~---~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~----~~~~~k 149 (279)
T cd05111 77 ICPG---ASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK----SDSIVQ 149 (279)
T ss_pred EECC---CccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc----CCCcEE
Confidence 8754 357889999999999999987667789999999999999999999999999999999999998 678999
Q ss_pred EEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhc
Q 001103 1026 VGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSN 1101 (1157)
Q Consensus 1026 LiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~ 1101 (1157)
|+|||+++...... ......++..|+|||.+.+. .++.++|||||||++|||++ |+.||.+......... ...
T Consensus 150 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~-~~~ 226 (279)
T cd05111 150 IADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFG--RYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDL-LEK 226 (279)
T ss_pred EcCCccceeccCCCcccccCCCCCcccccCHHHhccC--CcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HHC
Confidence 99999997543221 22334577889999998754 57899999999999999998 9999988765554333 334
Q ss_pred CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1102 TLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1102 ~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
......+..++..+.+++.+||..||.+|||+.++++.|..+..
T Consensus 227 ~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 227 GERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHh
Confidence 44445566678899999999999999999999999998887664
No 170
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=3.8e-37 Score=330.30 Aligned_cols=257 Identities=32% Similarity=0.535 Sum_probs=212.0
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEE
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAF 943 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkL 943 (1157)
+...+|++.+.||+|+||.||++.+. +..+|||+++.... ....+.+.+|+++++++ +||||+++
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~~h~~iv~~ 104 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-------SSEREALMSELKIMSHLGNHENIVNL 104 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-------hHHHHHHHHHHHHHHhccCCCCcceE
Confidence 44467999999999999999999752 23589998765311 12246788999999999 79999999
Q ss_pred eeeeecCCCCcEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCC
Q 001103 944 YGVVPNGPGGTMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRP 1022 (1157)
Q Consensus 944 ygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g 1022 (1157)
++.+.. .+..+++|||+.+++|.+++.+.. ..+++.+++.++.|++.||.|||+++|+|+||||+|||++ ..+
T Consensus 105 ~~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~----~~~ 178 (302)
T cd05055 105 LGACTI--GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT----HGK 178 (302)
T ss_pred EEEEec--CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc----CCC
Confidence 999877 567999999999999999986533 3489999999999999999999999999999999999998 677
Q ss_pred eEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHh
Q 001103 1023 ICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGI 1098 (1157)
Q Consensus 1023 ~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~I 1098 (1157)
.+||+|||++....... ......++..|+|||.+.+. .++.++|||||||++|+|++ |..||........+...
T Consensus 179 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~ 256 (302)
T cd05055 179 IVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNC--VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL 256 (302)
T ss_pred eEEECCCcccccccCCCceeecCCCCcccccCCHhhhccC--CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH
Confidence 89999999987543221 12223467889999998754 57889999999999999998 99999887766555555
Q ss_pred hhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1099 LSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1099 l~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.........+...++++.+||.+||..+|.+|||+.++++.|..+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 257 IKEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HHcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 555555556667889999999999999999999999999998864
No 171
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3e-37 Score=326.57 Aligned_cols=257 Identities=26% Similarity=0.405 Sum_probs=211.4
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
...+.|+++++||+|+||.||++++. +..+|+|++.... ......+.+|+.+++.++||||+++++.+..
T Consensus 9 ~~~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (292)
T cd06644 9 DPNEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS--------EEELEDYMVEIEILATCNHPYIVKLLGAFYW 80 (292)
T ss_pred CcchhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC--------HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe
Confidence 34467999999999999999999984 6779999986531 2235678889999999999999999999877
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
.+.+++||||+++++|..++.+....+++..++.++.|++.+|.|||+++|+||||||+|||++ .++.+||+||
T Consensus 81 --~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~----~~~~~kl~df 154 (292)
T cd06644 81 --DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT----LDGDIKLADF 154 (292)
T ss_pred --CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc----CCCCEEEccC
Confidence 5689999999999999888866666789999999999999999999999999999999999998 6778999999
Q ss_pred CCcccccCC-cccCCCCCCCcccCcccccCC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC-C
Q 001103 1030 GLSRIKCNT-LVSGGVRGTLPWMAPELLNGS---NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL-R 1104 (1157)
Q Consensus 1030 GLAkl~~~~-~~sts~~GTp~YmAPEVL~G~---~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l-r 1104 (1157)
|++...... .......+++.|+|||++.+. ...++.++|+|||||++|+|++|..||...........+..... .
T Consensus 155 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 234 (292)
T cd06644 155 GVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPT 234 (292)
T ss_pred ccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCcc
Confidence 998653222 222345688999999998532 23468899999999999999999999987765555444433222 2
Q ss_pred CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1105 PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1105 peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
...+..++.++.+||.+||+.+|.+||++++++++.+.
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 272 (292)
T cd06644 235 LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFV 272 (292)
T ss_pred CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccc
Confidence 23455678899999999999999999999999998664
No 172
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.8e-37 Score=317.35 Aligned_cols=253 Identities=34% Similarity=0.601 Sum_probs=211.5
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
+..++|++.+.||+|+||.||++.++ +..+|||.+..... ....+.+|+.++++++||||+++++++..
T Consensus 3 ~~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~---------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~- 72 (261)
T cd05034 3 IPRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM---------SPEAFLQEAQIMKKLRHDKLVQLYAVCSE- 72 (261)
T ss_pred cchhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc---------CHHHHHHHHHHHhhCCCCCEeeeeeeeec-
Confidence 45678999999999999999999875 45699998875321 12567889999999999999999999876
Q ss_pred CCCcEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
....+++|||+++++|.+++.... ..+++..++.++.|++.||.|||+++|+|+||||+|||++ .++.+||+||
T Consensus 73 -~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~----~~~~~~l~d~ 147 (261)
T cd05034 73 -EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG----ENLVCKIADF 147 (261)
T ss_pred -CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc----CCCCEEECcc
Confidence 567899999999999999987643 5689999999999999999999999999999999999998 6789999999
Q ss_pred CCcccccCCcc--cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCC
Q 001103 1030 GLSRIKCNTLV--SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1030 GLAkl~~~~~~--sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpe 1106 (1157)
|++........ .....++..|+|||.+.+. .++.++|+||||+++|+|++ |+.||.+......+..+.. .+...
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-~~~~~ 224 (261)
T cd05034 148 GLARLIEDDEYTAREGAKFPIKWTAPEAANYG--RFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER-GYRMP 224 (261)
T ss_pred ccceeccchhhhhhhccCCCccccCHHHhccC--CcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CCCCC
Confidence 99875432211 1122356789999998754 57889999999999999998 9999988877776666653 33445
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.+...+.++++++.+||+.+|.+||+++++++.|..
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 225 RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 566678999999999999999999999999998864
No 173
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-37 Score=327.57 Aligned_cols=258 Identities=26% Similarity=0.440 Sum_probs=210.5
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||.||+++++ +..||+|.++... .......+.+|+.++++++||||+++++.+.. .
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~ 71 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-------DESKFNQIIMELDILHKAVSPYIVDFYGAFFI--E 71 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-------CHHHHHHHHHHHHHHHhcCCCcHHhhhhheec--C
Confidence 36889999999999999999985 7789999886531 12224678899999999999999999999887 5
Q ss_pred CcEEEEEEeecCCcchhhhccc--cccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 953 GTMATVTEYMVNGSLRHVLARK--DRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~--gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
+..++||||+++++|..++... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++ .++.+||+||
T Consensus 72 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~----~~~~~~l~df 147 (286)
T cd06622 72 GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN----GNGQVKLCDF 147 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC----CCCCEEEeec
Confidence 6899999999999999888653 2368999999999999999999997 5999999999999998 6778999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCC----CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhh--hcCC
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSN----NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGIL--SNTL 1103 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~----~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il--~~~l 1103 (1157)
|++....... .....+++.|+|||.+.+.. ..++.++|+|||||++|+|++|+.||...........+. ....
T Consensus 148 g~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd06622 148 GVSGNLVASL-AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGD 226 (286)
T ss_pred CCcccccCCc-cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcC
Confidence 9987543332 22346888999999986431 245789999999999999999999997655433332221 1233
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1104 RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1104 rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
.+.++..+++++++||.+||+.+|.+||++++++++.|.....
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~ 269 (286)
T cd06622 227 PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYK 269 (286)
T ss_pred CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhcc
Confidence 4456677899999999999999999999999999988765543
No 174
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.5e-37 Score=325.72 Aligned_cols=256 Identities=26% Similarity=0.420 Sum_probs=213.3
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||.||++.++ +..+|+|++.... ....+.+.+|++++++++||||+++++.+.. .
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 74 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES--------EEELEDFMVEIDILSECKHPNIVGLYEAYFY--E 74 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC--------HHHHHHHHHHHHHHHhCCCCceeEEEEEEec--C
Confidence 46889999999999999999884 6779999986431 1224678899999999999999999999887 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+++++|..++.+.++.+++..++.++.|++.||.|||+++|+|+||||+|||++ .++.++|+|||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~----~~~~~~l~d~g~~ 150 (280)
T cd06611 75 NKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT----LDGDVKLADFGVS 150 (280)
T ss_pred CeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC----CCCCEEEccCccc
Confidence 689999999999999999877667799999999999999999999999999999999999998 6789999999988
Q ss_pred ccccCC-cccCCCCCCCcccCcccccCC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC-CCCC
Q 001103 1033 RIKCNT-LVSGGVRGTLPWMAPELLNGS---NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL-RPQI 1107 (1157)
Q Consensus 1033 kl~~~~-~~sts~~GTp~YmAPEVL~G~---~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l-rpei 1107 (1157)
...... .......+++.|+|||.+... ...++.++|+||||+++|+|++|+.||........+..+..... ....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 230 (280)
T cd06611 151 AKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQ 230 (280)
T ss_pred hhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCC
Confidence 654322 223345689999999997532 23467899999999999999999999988776665555543322 2234
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+..++.++.+||.+||+.+|.+||++.+++++.+...
T Consensus 231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 231 PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred cccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 5568899999999999999999999999999977543
No 175
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=4.2e-37 Score=320.67 Aligned_cols=256 Identities=29% Similarity=0.423 Sum_probs=211.2
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||.||++.+ .+..||+|++...... .........+.+|+.++++++||||+++++++.....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 78 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPES---PETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE 78 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCC---chhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC
Confidence 4788999999999999999987 4678999988754321 1122345678899999999999999999999876556
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++++|||+++++|.+++.... .+++..++.++.|++.||+|||+++|+||||||+||+++ .++.+||+|||++
T Consensus 79 ~~~~l~~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~----~~~~~~l~dfg~~ 153 (266)
T cd06651 79 KTLTIFMEYMPGGSVKDQLKAYG-ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD----SAGNVKLGDFGAS 153 (266)
T ss_pred CEEEEEEeCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC----CCCCEEEccCCCc
Confidence 78899999999999999986544 478899999999999999999999999999999999998 6678999999998
Q ss_pred ccccCC----cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC
Q 001103 1033 RIKCNT----LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP 1108 (1157)
Q Consensus 1033 kl~~~~----~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip 1108 (1157)
...... .......++..|+|||.+.+. .++.++|+|||||++|+|++|+.||........+..+......+.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (266)
T cd06651 154 KRLQTICMSGTGIRSVTGTPYWMSPEVISGE--GYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNPQLP 231 (266)
T ss_pred cccccccccCCccccCCccccccCHHHhCCC--CCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCCCCc
Confidence 754321 111234588999999998754 57899999999999999999999998776555555555445556677
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
..+++.++++| .||..+|.+||++++++++.+
T Consensus 232 ~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~ 263 (266)
T cd06651 232 SHISEHARDFL-GCIFVEARHRPSAEELLRHPF 263 (266)
T ss_pred hhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcc
Confidence 77889999999 677789999999999998765
No 176
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=8e-37 Score=315.26 Aligned_cols=257 Identities=21% Similarity=0.407 Sum_probs=209.6
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||.||+|... |+.||+|.++...... ......+.+|++++++++|++|+++++.+.. .
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~--~ 74 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD-----AKARQDCLKEIDLLKQLDHPNVIKYLASFIE--N 74 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccc-----hhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--C
Confidence 47999999999999999999984 7889999987542222 1224678899999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 953 GTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
+..+++|||+++++|..++.. ....+++..++.++.|++.||.|||++||+||||||+||+++ .++.++|+||
T Consensus 75 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~----~~~~~~l~d~ 150 (267)
T cd08224 75 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT----ATGVVKLGDL 150 (267)
T ss_pred CeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC----CCCcEEEecc
Confidence 688999999999999988854 245588999999999999999999999999999999999998 6778999999
Q ss_pred CCcccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--hHHHHHhhhcCCCCC
Q 001103 1030 GLSRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC--GAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1030 GLAkl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~--eeil~~Il~~~lrpe 1106 (1157)
|++....... ......++..|+|||.+.+. .++.++|+|||||++|+|++|+.||..... ......+......+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 228 (267)
T cd08224 151 GLGRFFSSKTTAAHSLVGTPYYMSPERIHEN--GYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPL 228 (267)
T ss_pred ceeeeccCCCcccceecCCccccCHHHhccC--CCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCC
Confidence 9987543322 22335689999999998754 578899999999999999999999965432 233333333333322
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
....++..++++|.+||..+|.+|||+.+|++.|+.+.
T Consensus 229 ~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 229 PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 22367889999999999999999999999999998764
No 177
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=6.1e-37 Score=315.71 Aligned_cols=251 Identities=23% Similarity=0.413 Sum_probs=211.8
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|+.++.||+|+||.||.++. .+..+++|.+...... ......+.+|++++++++|+||+++++++.+ ..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~------~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~ 72 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLS------EKERRDALNEIVILSLLQHPNIIAYYNHFMD--DN 72 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccc------hhHHHHHHHHHHHHHhCCCCCeeEEEeEEec--CC
Confidence 488999999999999998877 4677999988654211 1224567899999999999999999999987 56
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
.++++|||+++++|.+++.+. +..+++..+..++.|++.||.|||+.|++|+||||+||+++ .++.+||+|||++
T Consensus 73 ~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~----~~~~~kl~d~~~~ 148 (256)
T cd08221 73 TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT----KAGLIKLGDFGIS 148 (256)
T ss_pred eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe----CCCCEEECcCcce
Confidence 899999999999999998764 45689999999999999999999999999999999999998 6678999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
....... ......|++.|+|||.+.+. .++.++|+||||+++|+|++|..||......+....+....+.+ .+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~ape~~~~~--~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 225 (256)
T cd08221 149 KILGSEYSMAETVVGTPYYMSPELCQGV--KYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP-VVSVY 225 (256)
T ss_pred EEcccccccccccCCCccccCHhhcCCC--CCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC-Ccccc
Confidence 7543332 23345689999999998754 46788999999999999999999998877777776666554443 44668
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+.++.++|.+||..+|.+||++++++++++
T Consensus 226 ~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~ 255 (256)
T cd08221 226 SSELISLVHSLLQQDPEKRPTADEVLDQPL 255 (256)
T ss_pred CHHHHHHHHHHcccCcccCCCHHHHhhCcC
Confidence 899999999999999999999999998753
No 178
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=6.7e-37 Score=315.39 Aligned_cols=249 Identities=34% Similarity=0.633 Sum_probs=208.0
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..+|++.+.||+|+||.||++.+. +..+|+|+++..... ...+.+|++++++++||+|+++++++.. .
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~---------~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 71 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS---------EEDFIEEAQVMMKLSHPKLVQLYGVCTE--R 71 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC---------HHHHHHHHHHHHhCCCCCeeeEEEEEcc--C
Confidence 358899999999999999999885 778999988654211 2457789999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...+++|||+.+++|.+++......+++..++.++.|++.||+|||+++++||||||+||+++ ..+.+||+|||++
T Consensus 72 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~----~~~~~~l~d~g~~ 147 (256)
T cd05112 72 SPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG----ENQVVKVSDFGMT 147 (256)
T ss_pred CceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc----CCCeEEECCCcce
Confidence 578999999999999999876666688999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCcc--cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1033 RIKCNTLV--SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1033 kl~~~~~~--sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
........ .....++..|+|||.+.+. .++.++|+||||+++|+|++ |+.||...........+... .....+.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~aPe~~~~~--~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~ 224 (256)
T cd05112 148 RFVLDDQYTSSTGTKFPVKWSSPEVFSFS--KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAG-FRLYKPR 224 (256)
T ss_pred eecccCcccccCCCccchhhcCHhHhccC--CcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCC-CCCCCCC
Confidence 75433221 2223356789999998754 57889999999999999998 99999887766666655433 2333455
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
..++.+.+|+.+||+.+|.+||++.++++.|
T Consensus 225 ~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 225 LASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 6789999999999999999999999999886
No 179
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=3.9e-37 Score=324.48 Aligned_cols=253 Identities=34% Similarity=0.573 Sum_probs=208.6
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEE-------CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEe
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKW-------RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFY 944 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~-------kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLy 944 (1157)
++..+|...++||+|+||.||+++. .+..+|+|.++... ......+.+|+++++.++||||++++
T Consensus 2 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h~~i~~~~ 73 (280)
T cd05092 2 IKRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS--------ESARQDFQREAELLTVLQHQHIVRFY 73 (280)
T ss_pred CChHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC--------HHHHHHHHHHHHHHhcCCCCCCceEE
Confidence 4567889999999999999999975 24468888876431 22346788999999999999999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhcccc--------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCcc
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKD--------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCD 1010 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~g--------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPE 1010 (1157)
+++.. ....+++|||+.+++|.+++.... ..+++..++.++.|++.||+|||++||+||||||+
T Consensus 74 ~~~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~ 151 (280)
T cd05092 74 GVCTE--GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATR 151 (280)
T ss_pred EEEec--CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHh
Confidence 99877 557899999999999999986542 24788999999999999999999999999999999
Q ss_pred ceeeccCCCCCCeEEEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCC
Q 001103 1011 NLLVNLRDPQRPICKVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPY 1086 (1157)
Q Consensus 1011 NILLd~dd~e~g~VKLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF 1086 (1157)
|||++ +++.+||+|||++........ .....+++.|+|||.+.+. .++.++|||||||++|+|++ |.+||
T Consensus 152 nil~~----~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~p~ 225 (280)
T cd05092 152 NCLVG----QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR--KFTTESDIWSFGVVLWEIFTYGKQPW 225 (280)
T ss_pred hEEEc----CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccC--CcCchhhHHHHHHHHHHHHcCCCCCC
Confidence 99998 677999999999875432211 1223357889999998754 57899999999999999998 99999
Q ss_pred CCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1087 ANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1087 ~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
...........+... .....+..+++.+.+||.+||+.||.+||++.+|++.|.
T Consensus 226 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 226 YQLSNTEAIECITQG-RELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred ccCCHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 877766666555433 334456678999999999999999999999999998875
No 180
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=5.7e-37 Score=320.10 Aligned_cols=245 Identities=34% Similarity=0.611 Sum_probs=202.7
Q ss_pred EecccCcEEEEEEEEC----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEE
Q 001103 882 ELGSGTFGTVYRGKWR----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~k----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyL 957 (1157)
.||+|+||.||+|.+. +..||+|++.... .....+.+.+|+.++++++||||+++++++.. ...++
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~---~~~~l 71 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-------EKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA---EALML 71 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-------ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC---CCeEE
Confidence 4899999999999773 3459999886531 12234678899999999999999999998754 36899
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN 1037 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~ 1037 (1157)
||||+++++|.+++......+++..++.++.|++.||.|||++|++||||||+|||++ ..+.+||+|||++.....
T Consensus 72 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~----~~~~~kl~dfg~~~~~~~ 147 (257)
T cd05115 72 VMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV----NQHYAKISDFGLSKALGA 147 (257)
T ss_pred EEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc----CCCcEEeccCCccccccC
Confidence 9999999999999876566789999999999999999999999999999999999998 677899999999875332
Q ss_pred Ccc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCCCc
Q 001103 1038 TLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1038 ~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~iS 1112 (1157)
... .....++..|+|||.+.+. .++.++|||||||++|+|++ |..||...........+. ...+...+..++
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 224 (257)
T cd05115 148 DDSYYKARSAGKWPLKWYAPECINFR--KFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIE-QGKRLDCPAECP 224 (257)
T ss_pred CccceeccCCCCCCcccCCHHHHccC--CCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHH-CCCCCCCCCCCC
Confidence 211 1112245789999998754 57889999999999999996 999999887766554443 444556778889
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
+++.++|.+||..+|++||++.+|++.|+.+
T Consensus 225 ~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 225 PEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 9999999999999999999999999998865
No 181
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=6.4e-37 Score=350.03 Aligned_cols=256 Identities=19% Similarity=0.245 Sum_probs=194.7
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC------CCceeEEe
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH------HPNVVAFY 944 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~------HPNIVkLy 944 (1157)
...+|+++++||+|+||+||+|.+ .+..||||+++... .....+..|+++++.+. |+++++++
T Consensus 127 ~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~ 197 (467)
T PTZ00284 127 STQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---------KYTRDAKIEIQFMEKVRQADPADRFPLMKIQ 197 (467)
T ss_pred CCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---------hhHHHHHHHHHHHHHHhhcCcccCcceeeeE
Confidence 346899999999999999999988 46679999987531 11233445666666664 45688999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCCC----
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRDP---- 1019 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd~---- 1019 (1157)
+++... ...+|+|||++ +++|.+++.+. +.+++..++.++.||+.||.|||+ .|||||||||+|||++.++.
T Consensus 198 ~~~~~~-~~~~~iv~~~~-g~~l~~~l~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~ 274 (467)
T PTZ00284 198 RYFQNE-TGHMCIVMPKY-GPCLLDWIMKH-GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDP 274 (467)
T ss_pred EEEEcC-CceEEEEEecc-CCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccc
Confidence 988764 45789999988 66888887654 358899999999999999999998 59999999999999984321
Q ss_pred --------CCCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh
Q 001103 1020 --------QRPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC 1091 (1157)
Q Consensus 1020 --------e~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~ 1091 (1157)
+...+||+|||++..... .....+||+.|+|||++.+. .|+.++|||||||+||||++|++||.+...
T Consensus 275 ~~~~~~~~~~~~vkl~DfG~~~~~~~--~~~~~~gt~~Y~APE~~~~~--~~~~~~DiwSlGvil~elltG~~pf~~~~~ 350 (467)
T PTZ00284 275 VTNRALPPDPCRVRICDLGGCCDERH--SRTAIVSTRHYRSPEVVLGL--GWMYSTDMWSMGCIIYELYTGKLLYDTHDN 350 (467)
T ss_pred ccccccCCCCceEEECCCCccccCcc--ccccccCCccccCcHHhhcC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCh
Confidence 123699999998764322 23346799999999999865 578999999999999999999999987665
Q ss_pred hHHHHHhhhcC--C-----------------------CCCC---------------CCCCcHHHHHHHHHHhccCCCCCC
Q 001103 1092 GAIIGGILSNT--L-----------------------RPQI---------------PERCDPEWRKLMEECWSFNPAARP 1131 (1157)
Q Consensus 1092 eeil~~Il~~~--l-----------------------rpei---------------p~~iSpeLrdLIkrCLqkDPskRP 1131 (1157)
.+.+..+.... + .+.. ....++.+.+||.+||++||.+||
T Consensus 351 ~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 351 LEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred HHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 44333221110 0 0000 001135678999999999999999
Q ss_pred CHHHHHHHHHHHH
Q 001103 1132 SFTEITNRLRVMS 1144 (1157)
Q Consensus 1132 SaeELLe~Lr~Lk 1144 (1157)
|++++++|.|...
T Consensus 431 ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 431 NARQMTTHPYVLK 443 (467)
T ss_pred CHHHHhcCccccc
Confidence 9999999988753
No 182
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=4.1e-37 Score=324.12 Aligned_cols=253 Identities=31% Similarity=0.513 Sum_probs=206.4
Q ss_pred CCCeeEEEEecccCcEEEEEEEECC------------------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWRG------------------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL 935 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~kG------------------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L 935 (1157)
..+|+++++||+|+||.||++++.. ..||+|++..... ......+.+|+++++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~-------~~~~~~~~~e~~~l~~l 76 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS-------DNAREDFLKEVKILSRL 76 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC-------HHHHHHHHHHHHHHHhc
Confidence 4689999999999999999988742 3489998775421 12356788999999999
Q ss_pred CCCceeEEeeeeecCCCCcEEEEEEeecCCcchhhhcccc----------ccccHHHHHHHHHHHHHHHHHHHHCCceec
Q 001103 936 HHPNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD----------RILDRRKKLMLMMDAAFGMEYLHMKNIVHF 1005 (1157)
Q Consensus 936 ~HPNIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g----------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHR 1005 (1157)
+||||+++++++.. ....+++|||+.+++|..++.+.. ..+++..++.++.|++.||.|||+++|+||
T Consensus 77 ~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~ 154 (296)
T cd05051 77 SDPNIARLLGVCTV--DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHR 154 (296)
T ss_pred CCCCEeEEEEEEec--CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 99999999999887 468899999999999999986543 258999999999999999999999999999
Q ss_pred cCCccceeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-
Q 001103 1006 DLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT- 1081 (1157)
Q Consensus 1006 DLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT- 1081 (1157)
||||+|||++ ..+.++|+|||++....... ......++..|+|||.+.+. .++.++|||||||++|+|++
T Consensus 155 dlkp~Nili~----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~el~~~ 228 (296)
T cd05051 155 DLATRNCLVG----KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLG--KFTTKSDVWAFGVTLWEILTL 228 (296)
T ss_pred ccchhceeec----CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcC--CCCccchhhhhHHHHHHHHhc
Confidence 9999999998 66899999999987543221 22234567889999998754 57899999999999999998
Q ss_pred -CCCCCCCCChhHHHHHhhhc------CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1082 -GEEPYANMHCGAIIGGILSN------TLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1082 -Gk~PF~g~~~eeil~~Il~~------~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+..||........+...... ......+..++.++.+||.+||+.||.+|||+.+|++.|.
T Consensus 229 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 229 CREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 78899877666555544322 1112234557789999999999999999999999998875
No 183
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=4.6e-37 Score=316.18 Aligned_cols=251 Identities=27% Similarity=0.426 Sum_probs=207.8
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||.||++.+. +..+|+|++..... ...+.+.+|+.++++++||||+++++.+.. .
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~ 72 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG--------DDFEIIQQEISMLKECRHPNIVAYFGSYLR--R 72 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch--------hhHHHHHHHHHHHHhCCCCChhceEEEEEe--C
Confidence 58999999999999999999884 56799999875411 124678899999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|++|||+.+++|.+++......+++..++.++.|++.||.|||+++|+|+||||+||+++ ..+.+||+|||++
T Consensus 73 ~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~----~~~~~~l~d~g~~ 148 (262)
T cd06613 73 DKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT----EDGDVKLADFGVS 148 (262)
T ss_pred CEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC----CCCCEEECccccc
Confidence 689999999999999999877656689999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC---CC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGS-NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP---QI 1107 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~-~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp---ei 1107 (1157)
....... ......++..|+|||.+.+. ...++.++|+||||+++|+|++|+.||...........+....+.+ ..
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (262)
T cd06613 149 AQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKD 228 (262)
T ss_pred hhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccc
Confidence 7544322 23345789999999998643 1257889999999999999999999998776555444443332222 22
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
+...+.++++||.+||..+|.+|||+.+++.+
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 229 KEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred hhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 34467889999999999999999999999875
No 184
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.8e-37 Score=323.68 Aligned_cols=248 Identities=26% Similarity=0.400 Sum_probs=201.0
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||.||++++ .+..||+|++.... . ......+.+|++++++++||||+++++.+.. .
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~----~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~ 71 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI----T---VELQKQIMSELEILYKCDSPYIIGFYGAFFV--E 71 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC----C---hHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE--C
Confidence 3688899999999999999987 46779999887541 1 1223568899999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+++++|..+. .+++..+..++.|++.||.|||++||+|+||||+|||++ .++.+||+|||++
T Consensus 72 ~~~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~----~~~~~~l~dfg~~ 142 (279)
T cd06619 72 NRISICTEFMDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN----TRGQVKLCDFGVS 142 (279)
T ss_pred CEEEEEEecCCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC----CCCCEEEeeCCcc
Confidence 6789999999999986542 367888899999999999999999999999999999998 6789999999999
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-------HHHHHhhhcCCCC
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-------AIIGGILSNTLRP 1105 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-------eil~~Il~~~lrp 1105 (1157)
....... .....||..|+|||++.+. .++.++|+|||||++|+|++|+.||...... .....+.......
T Consensus 143 ~~~~~~~-~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (279)
T cd06619 143 TQLVNSI-AKTYVGTNAYMAPERISGE--QYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPV 219 (279)
T ss_pred eeccccc-ccCCCCChhhcCceeecCC--CCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCC
Confidence 7544332 2346799999999999854 5789999999999999999999999653321 2222222222222
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
......++++++||.+||+.+|.+||++++++++.+..
T Consensus 220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~ 257 (279)
T cd06619 220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIV 257 (279)
T ss_pred CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence 22345788999999999999999999999999987654
No 185
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=8.3e-37 Score=317.45 Aligned_cols=255 Identities=35% Similarity=0.606 Sum_probs=209.9
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC--Cc---eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR--GT---DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k--Gt---~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
...+|+..+.||+|+||.||++++. +. .+|+|.++... .....+.+.+|+++++.++||||+++++++
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~ 75 (268)
T cd05063 3 HPSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-------TEKQRQDFLSEASIMGQFSHHNIIRLEGVV 75 (268)
T ss_pred ChHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-------CHHHHHHHHHHHHHHhcCCCCCeeEEEEEE
Confidence 4457889999999999999999874 32 58999876431 112246688999999999999999999998
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
.. .+..++||||+++++|.+++......+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+
T Consensus 76 ~~--~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~----~~~~~kl~ 149 (268)
T cd05063 76 TK--FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN----SNLECKVS 149 (268)
T ss_pred cc--CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc----CCCcEEEC
Confidence 77 5678999999999999999977666789999999999999999999999999999999999998 67789999
Q ss_pred ecCCcccccCCcc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcC
Q 001103 1028 DFGLSRIKCNTLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNT 1102 (1157)
Q Consensus 1028 DFGLAkl~~~~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~ 1102 (1157)
|||++........ ......+..|+|||++.+. .++.++|||||||++|+|++ |+.||...........+...
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~- 226 (268)
T cd05063 150 DFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYR--KFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDG- 226 (268)
T ss_pred CCccceecccccccceeccCCCcCceecCHHHhhcC--CcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcC-
Confidence 9999875432211 1112234579999998754 57899999999999999997 99999877766666666443
Q ss_pred CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1103 LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1103 lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.....+..++.++.+|+.+||+.+|.+||++.++++.|..+
T Consensus 227 ~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 FRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 34445566889999999999999999999999999998764
No 186
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=3.3e-37 Score=322.49 Aligned_cols=252 Identities=26% Similarity=0.368 Sum_probs=200.1
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++++.||+|+||.||+|++ .+..||||+++..... +.....+.+|+.+++.++||||+++++++.. ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 72 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE------EGVPSTAIREISLLKELQHPNIVCLQDVLMQ--ES 72 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc------CCchHHHHHHHHHHHhcCCCCEeeeEEEEee--CC
Confidence 588999999999999999988 4778999998754211 1123567789999999999999999999987 56
Q ss_pred cEEEEEEeecCCcchhhhccc--cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 954 TMATVTEYMVNGSLRHVLARK--DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~--gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
.+++||||+. ++|.+++... +..+++..++.++.||+.||.|||+++|+||||||+|||++ .++.+||+|||+
T Consensus 73 ~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~----~~~~~~l~dfg~ 147 (285)
T cd07861 73 RLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID----NKGVIKLADFGL 147 (285)
T ss_pred eEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc----CCCcEEECcccc
Confidence 8999999997 5787777542 25689999999999999999999999999999999999998 677899999999
Q ss_pred cccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC--------
Q 001103 1032 SRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT-------- 1102 (1157)
Q Consensus 1032 Akl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~-------- 1102 (1157)
+....... ......+++.|+|||++.+. ..++.++|+|||||++|+|++|+.||...........+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (285)
T cd07861 148 ARAFGIPVRVYTHEVVTLWYRAPEVLLGS-PRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVW 226 (285)
T ss_pred eeecCCCcccccCCcccccccChHHhcCC-CCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Confidence 87543222 22334578999999998754 346889999999999999999999998765433322221100
Q ss_pred -------------------CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 -------------------LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 -------------------lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
........+++++++||.+||..||.+|||+.+++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~ 284 (285)
T cd07861 227 PGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPY 284 (285)
T ss_pred hcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCC
Confidence 000112347889999999999999999999999998754
No 187
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=6.7e-37 Score=313.95 Aligned_cols=251 Identities=25% Similarity=0.469 Sum_probs=211.3
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++++.||+|+||.||++.. .+..+|||++...... ......+.+|+++++.++||||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~ 72 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT------KDERLAAQNECQVLKLLSHPNIIEYYENFLE--DK 72 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc------cHHHHHHHHHHHHHhhCCCCchhheeeeEec--CC
Confidence 588999999999999999887 4667999998764221 1124678899999999999999999999876 56
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++||||+++++|.+++... +..+++..++.++.|++.+|+|||++||+|+||||+||+++. ....+||+|||++
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~---~~~~~~l~d~~~~ 149 (256)
T cd08220 73 ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK---HKMVVKIGDFGIS 149 (256)
T ss_pred EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEEccCCCc
Confidence 899999999999999999764 345899999999999999999999999999999999999972 3457899999999
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCc
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iS 1112 (1157)
.............|+..|+|||.+.+. .++.++|+||||+++|+|++|+.||...........+..... ..++..++
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 226 (256)
T cd08220 150 KILSSKSKAYTVVGTPCYISPELCEGK--PYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTF-APISDRYS 226 (256)
T ss_pred eecCCCccccccccCCcccCchhccCC--CCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCC-CCCCCCcC
Confidence 866554444446789999999999754 568899999999999999999999988776666655554433 34666789
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
++++++|.+||+.+|.+|||+.+++++.
T Consensus 227 ~~l~~li~~~l~~~p~~Rpt~~~ll~~p 254 (256)
T cd08220 227 PDLRQLILSMLNLDPSKRPQLSQIMAQP 254 (256)
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhhCC
Confidence 9999999999999999999999999864
No 188
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=6e-37 Score=326.68 Aligned_cols=260 Identities=28% Similarity=0.506 Sum_probs=213.2
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC---------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCce
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR---------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNV 940 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k---------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNI 940 (1157)
.+...+|++.+.||+|+||.||++++. +..||+|.++... .......+.+|+.+++.+ +||||
T Consensus 11 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~i 83 (304)
T cd05101 11 EFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-------TEKDLSDLVSEMEMMKMIGKHKNI 83 (304)
T ss_pred cccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-------chHHHHHHHHHHHHHHhhccCCCc
Confidence 355678999999999999999999752 2358999876431 112246788999999999 89999
Q ss_pred eEEeeeeecCCCCcEEEEEEeecCCcchhhhcccc---------------ccccHHHHHHHHHHHHHHHHHHHHCCceec
Q 001103 941 VAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHF 1005 (1157)
Q Consensus 941 VkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHR 1005 (1157)
+++++++.. ....+++|||+.+++|.+++.+.. ..+++..++.++.||+.||.|||++||+||
T Consensus 84 ~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~ 161 (304)
T cd05101 84 INLLGACTQ--DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHR 161 (304)
T ss_pred hheeEEEec--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 999999887 568899999999999999886531 347788899999999999999999999999
Q ss_pred cCCccceeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-
Q 001103 1006 DLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT- 1081 (1157)
Q Consensus 1006 DLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT- 1081 (1157)
||||+|||++ ..+.+||+|||+++...... ......++..|+|||++.+. .++.++||||||+++|+|++
T Consensus 162 dlkp~Nili~----~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~ 235 (304)
T cd05101 162 DLAARNVLVT----ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDR--VYTHQSDVWSFGVLMWEIFTL 235 (304)
T ss_pred ccccceEEEc----CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccC--CCCchhhHHHHHHHHHHHHcC
Confidence 9999999998 67799999999997543321 12223466789999998754 57899999999999999998
Q ss_pred CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1082 GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1082 Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
|..||......+....+. ...+...+..++.++++||.+||..+|.+|||+.++++.|+.+...
T Consensus 236 g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 236 GGSPYPGIPVEELFKLLK-EGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred CCCCcccCCHHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 889998887776666554 3334455677899999999999999999999999999999887754
No 189
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.5e-37 Score=337.77 Aligned_cols=255 Identities=22% Similarity=0.329 Sum_probs=203.2
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++++.||+|+||+||++.+ .+..||||++..... .......+.+|++++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQ------SLIHARRTYRELRLLKHMKHENVIGLLDVFTPAT 87 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhh------hhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccc
Confidence 36899999999999999999987 466799999875411 1122356778999999999999999999876422
Q ss_pred ----CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 ----GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ----~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
....|++|+++ +++|.++++. +.+++..++.++.||+.||.|||++||+||||||+|||++ .++.+||+
T Consensus 88 ~~~~~~~~~~~~~~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~----~~~~~kl~ 160 (343)
T cd07878 88 SIENFNEVYLVTNLM-GADLNNIVKC--QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN----EDCELRIL 160 (343)
T ss_pred cccccCcEEEEeecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC----CCCCEEEc
Confidence 23578999988 7788887753 3489999999999999999999999999999999999998 67889999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC---
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR--- 1104 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr--- 1104 (1157)
|||++...... .....||+.|+|||++.+. ..++.++|||||||++|+|++|+.||........+..+......
T Consensus 161 Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07878 161 DFGLARQADDE--MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSP 237 (343)
T ss_pred CCccceecCCC--cCCccccccccCchHhcCC-ccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99999865433 2346799999999998753 35788999999999999999999999876654444333211000
Q ss_pred ------------------CC--------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1105 ------------------PQ--------IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1105 ------------------pe--------ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+. .....++.+.+||.+||..||.+|||+.+++++.+...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~hp~~~~ 303 (343)
T cd07878 238 EVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAHPYFSQ 303 (343)
T ss_pred HHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhc
Confidence 00 11235677899999999999999999999999988754
No 190
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=5.7e-37 Score=316.12 Aligned_cols=245 Identities=34% Similarity=0.605 Sum_probs=205.7
Q ss_pred EEecccCcEEEEEEEEC---Cc--eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcE
Q 001103 881 QELGSGTFGTVYRGKWR---GT--DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k---Gt--~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~L 955 (1157)
+.||+|++|.||++.+. ++ .||||++...... ...+.+.+|+.++++++||||+++++.+.. ...
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~ 70 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-------DIMDDFLKEAAIMHSLDHENLIRLYGVVLT---HPL 70 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-------HHHHHHHHHHHHHhhcCCCCccceeEEEcC---CeE
Confidence 36899999999999873 22 5899998765221 345788899999999999999999999876 578
Q ss_pred EEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 956 ATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
+++|||+++++|.+++.+.. ..+++..++.++.|++.||.|||+++++||||||+|||++ .++.+||+|||++..
T Consensus 71 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~----~~~~~kl~dfg~~~~ 146 (257)
T cd05040 71 MMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA----SDDKVKIGDFGLMRA 146 (257)
T ss_pred EEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe----cCCEEEecccccccc
Confidence 99999999999999987654 5689999999999999999999999999999999999998 668999999999876
Q ss_pred ccCCc----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1035 KCNTL----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1035 ~~~~~----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
..... ......++..|+|||.+.+. .++.++|||||||++|+|++ |+.||......+....+.........+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~--~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 224 (257)
T cd05040 147 LPQNEDHYVMEEHLKVPFAWCAPESLRTR--TFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLERPE 224 (257)
T ss_pred ccccccceecccCCCCCceecCHHHhccc--CcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCCCCc
Confidence 43311 11224577889999998754 57889999999999999998 9999988777776666654444445566
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
..+..+.+++.+||+.+|++||++.++++.|.
T Consensus 225 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 225 ACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred cCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 78899999999999999999999999999874
No 191
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.5e-37 Score=314.20 Aligned_cols=254 Identities=26% Similarity=0.451 Sum_probs=211.3
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|+..+.||+|+||.||+|.. ++..|++|.+....... ......+.+.+|+.+++.++||||+++++++.. ..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~ 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQ---TGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE--ED 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccc---cchHHHHHHHHHHHHHHhcCCCCchheeeeEec--CC
Confidence 466778999999999999988 47789999987642211 122335678899999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.++++|||+++++|.+++.+.. .+++..++.++.|++.||.|||+.||+|+||||+||+++ ..+.+||+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~----~~~~~kl~d~~~~~ 150 (258)
T cd06632 76 NLYIFLELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD----TNGVVKLADFGMAK 150 (258)
T ss_pred eEEEEEEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC----CCCCEEEccCccce
Confidence 8999999999999999987654 478999999999999999999999999999999999998 67799999999987
Q ss_pred cccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcH
Q 001103 1034 IKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDP 1113 (1157)
Q Consensus 1034 l~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSp 1113 (1157)
............|+..|++||.+.... .++.++|+||||+++|+|++|+.||...........+......+.++..+++
T Consensus 151 ~~~~~~~~~~~~~~~~y~~pe~~~~~~-~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (258)
T cd06632 151 QVVEFSFAKSFKGSPYWMAPEVIAQQG-GYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPIPDHLSD 229 (258)
T ss_pred eccccccccccCCCcceeCHHHhcCCC-CCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCcCCCcCH
Confidence 654443344567899999999986432 3789999999999999999999999877655554444443444566778899
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1114 EWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1114 eLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
.+++||.+||+.+|.+||++.+++.+.
T Consensus 230 ~~~~li~~~l~~~p~~Rp~~~~~l~~~ 256 (258)
T cd06632 230 EAKDFILKCLQRDPSLRPTAAELLEHP 256 (258)
T ss_pred HHHHHHHHHhhcCcccCcCHHHHhcCC
Confidence 999999999999999999999999764
No 192
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=9.6e-37 Score=317.98 Aligned_cols=256 Identities=31% Similarity=0.582 Sum_probs=211.1
Q ss_pred cCCCeeEEEEecccCcEEEEEEEECC-----ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWRG-----TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~kG-----t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
...+|.+.+.||+|+||.||+|.+.. ..||||...... .....+.+.+|+.+++.++||||+++++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-------~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~ 76 (270)
T cd05056 4 QREDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-------SPSVREKFLQEAYIMRQFDHPHIVKLIGVI 76 (270)
T ss_pred chhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-------CHHHHHHHHHHHHHHHhCCCCchhceeEEE
Confidence 34678899999999999999998742 258999876431 022346788999999999999999999988
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
.+ ...++||||+++++|.+++.+....+++..++.++.|++.||+|||+++++||||||+|||++ ..+.+||+
T Consensus 77 ~~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~----~~~~~~l~ 149 (270)
T cd05056 77 TE---NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS----SPDCVKLG 149 (270)
T ss_pred cC---CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe----cCCCeEEc
Confidence 65 346899999999999999977666689999999999999999999999999999999999998 67789999
Q ss_pred ecCCcccccCCcc--cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCC
Q 001103 1028 DFGLSRIKCNTLV--SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLR 1104 (1157)
Q Consensus 1028 DFGLAkl~~~~~~--sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lr 1104 (1157)
|||++........ .....++..|+|||.+.+. .++.++|+||||+++|+|++ |..||...........+.. ...
T Consensus 150 d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~-~~~ 226 (270)
T cd05056 150 DFGLSRYLEDESYYKASKGKLPIKWMAPESINFR--RFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIEN-GER 226 (270)
T ss_pred cCceeeecccccceecCCCCccccccChhhhccC--CCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc-CCc
Confidence 9999875433321 1122345689999998754 57899999999999999986 9999988776666555443 334
Q ss_pred CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1105 PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1105 peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
...+..+++++.+||.+||..+|.+|||+.++++.|..+..
T Consensus 227 ~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 227 LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHh
Confidence 45677889999999999999999999999999999998764
No 193
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=9.2e-37 Score=322.90 Aligned_cols=258 Identities=33% Similarity=0.555 Sum_probs=208.1
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEE
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAF 943 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkL 943 (1157)
.+...+|++.+.||+|+||.||+|.++ +..||+|.+.... . ......+.+|+.+++.++||||+++
T Consensus 2 ~~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~---~~~~~~~~~e~~~l~~l~~~~i~~~ 74 (288)
T cd05061 2 EVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA----S---LRERIEFLNEASVMKGFTCHHVVRL 74 (288)
T ss_pred cccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC----C---HHHHHHHHHHHHHHHhCCCCCeeeE
Confidence 455678999999999999999998753 3369999876431 1 1112457789999999999999999
Q ss_pred eeeeecCCCCcEEEEEEeecCCcchhhhcccc---------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceee
Q 001103 944 YGVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLV 1014 (1157)
Q Consensus 944 ygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILL 1014 (1157)
++++.. ....++||||+.+|+|.+++.+.. ..++...++.++.|++.||.|||+++|+||||||+|||+
T Consensus 75 ~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili 152 (288)
T cd05061 75 LGVVSK--GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMV 152 (288)
T ss_pred EEEEcC--CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEE
Confidence 999876 457899999999999999986422 224567788999999999999999999999999999999
Q ss_pred ccCCCCCCeEEEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCC
Q 001103 1015 NLRDPQRPICKVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMH 1090 (1157)
Q Consensus 1015 d~dd~e~g~VKLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~ 1090 (1157)
+ .++.+||+|||+++....... .....++..|+|||.+.+. .++.++|+|||||++|||++ |..||....
T Consensus 153 ~----~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~--~~~~~~DvwslG~~l~el~~~~~~p~~~~~ 226 (288)
T cd05061 153 A----HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG--VFTTSSDMWSFGVVLWEITSLAEQPYQGLS 226 (288)
T ss_pred c----CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccC--CCChHhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 8 677899999999875432211 1122356789999998754 57899999999999999998 899998877
Q ss_pred hhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1091 CGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1091 ~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
..+....+..... ...+..+++.+++||.+||+.||.+|||+.++++.|+...
T Consensus 227 ~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 227 NEQVLKFVMDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred HHHHHHHHHcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 7776665554433 3456677899999999999999999999999999887653
No 194
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.6e-37 Score=329.29 Aligned_cols=260 Identities=27% Similarity=0.437 Sum_probs=207.8
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||.||++++. +..+|+|.+.... ......++.+|++++++++||||+++++.+.. .
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~ 71 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-------KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--D 71 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-------CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee--C
Confidence 37899999999999999999884 5668998876431 12234678899999999999999999999987 6
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
+.+++||||+++++|.+++.+. +.+++..+..++.|++.||.|||+ .+|+||||||+|||++ .++.+||+|||+
T Consensus 72 ~~~~lv~ey~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~----~~~~~~l~dfg~ 146 (308)
T cd06615 72 GEISICMEHMDGGSLDQVLKKA-GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN----SRGEIKLCDFGV 146 (308)
T ss_pred CEEEEEeeccCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe----cCCcEEEccCCC
Confidence 6899999999999999999765 458899999999999999999998 5999999999999998 667899999999
Q ss_pred cccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh-----------
Q 001103 1032 SRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS----------- 1100 (1157)
Q Consensus 1032 Akl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~----------- 1100 (1157)
+....... .....|+..|+|||.+.+. .++.++|+|||||++|+|++|+.||...........+..
T Consensus 147 ~~~~~~~~-~~~~~~~~~~~aPE~~~~~--~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (308)
T cd06615 147 SGQLIDSM-ANSFVGTRSYMSPERLQGT--HYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESH 223 (308)
T ss_pred cccccccc-cccCCCCcCccChhHhcCC--CCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCc
Confidence 87543322 2346799999999998754 478899999999999999999999975443222111100
Q ss_pred ------------------------cCCCCCCC-CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 001103 1101 ------------------------NTLRPQIP-ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQTKR 1151 (1157)
Q Consensus 1101 ------------------------~~lrpeip-~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLesks 1151 (1157)
...++..+ ..++.++++||.+||..+|++||++++++++.+..........
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~ 299 (308)
T cd06615 224 RPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRAELEEVD 299 (308)
T ss_pred ccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhcccccch
Confidence 00111122 1367889999999999999999999999999998765444333
No 195
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5.2e-37 Score=320.42 Aligned_cols=253 Identities=26% Similarity=0.394 Sum_probs=207.0
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||+|+||.||+|++ .++.||||++...... ......+.+|+.++++++||||+++++++.. ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~ 72 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE------GGIPNQALREIKALQACQHPYVVKLLDVFPH--GS 72 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc------chhhHHHHHHHHHHHhCCCCCCcceeeEEec--CC
Confidence 588999999999999999998 4678999998764221 1224678899999999999999999999987 66
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.+++||||+ +++|.+++......+++..++.++.|++.||.|||+++|+|+||||+||+++ ..+.++|+|||++.
T Consensus 73 ~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~----~~~~~~l~dfg~~~ 147 (286)
T cd07832 73 GFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS----ADGVLKIADFGLAR 147 (286)
T ss_pred eeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc----CCCcEEEeeeeecc
Confidence 899999999 9999999876667799999999999999999999999999999999999998 67889999999987
Q ss_pred cccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC------
Q 001103 1034 IKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP------ 1105 (1157)
Q Consensus 1034 l~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp------ 1105 (1157)
...... ......|+..|+|||.+.+. ..++.++|||||||++|+|++|.+||.+......+..+......+
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07832 148 LFSEEEPRLYSHQVATRWYRAPELLYGA-RKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWP 226 (286)
T ss_pred cccCCCCCccccccCcccccCceeeecc-ccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHh
Confidence 654332 23345689999999998653 346889999999999999999999998766554444333211000
Q ss_pred ----------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1106 ----------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1106 ----------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
......+..+.+||.+||..+|.+||++++++++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~ 285 (286)
T cd07832 227 GLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285 (286)
T ss_pred hccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCc
Confidence 0112456889999999999999999999999998653
No 196
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.4e-37 Score=323.09 Aligned_cols=253 Identities=26% Similarity=0.404 Sum_probs=208.2
Q ss_pred eeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
|++++.||+|+||.||++++. +..+|+|.+.... ......+.+|+++++.++||||+++++.+.. ...
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~ 76 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS--------EEELEDYMVEIDILASCDHPNIVKLLDAFYY--ENN 76 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC--------HHHHHHHHHHHHHHHHCCCCCeeeEEEEEee--CCE
Confidence 578899999999999999985 5568888875431 1224667889999999999999999999877 568
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
.++||||+.+++|..++.+....+++..++.++.|++.||.|||+.||+||||||+|||++ .++.+||+|||++..
T Consensus 77 ~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~----~~~~~kl~dfg~~~~ 152 (282)
T cd06643 77 LWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT----LDGDIKLADFGVSAK 152 (282)
T ss_pred EEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc----cCCCEEEcccccccc
Confidence 9999999999999988866556789999999999999999999999999999999999998 677899999999875
Q ss_pred ccCC-cccCCCCCCCcccCcccccC---CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC-CCCCCCC
Q 001103 1035 KCNT-LVSGGVRGTLPWMAPELLNG---SNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT-LRPQIPE 1109 (1157)
Q Consensus 1035 ~~~~-~~sts~~GTp~YmAPEVL~G---~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~-lrpeip~ 1109 (1157)
.... .......++..|+|||++.. ....++.++|+|||||++|+|++|++||...........+.... .....+.
T Consensus 153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (282)
T cd06643 153 NTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPS 232 (282)
T ss_pred ccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCcc
Confidence 4322 22334568999999999842 22346789999999999999999999998876655555554332 2223456
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.++.++++||.+||+.||.+||++.+++++.+..
T Consensus 233 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~ 266 (282)
T cd06643 233 RWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVT 266 (282)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEe
Confidence 6889999999999999999999999999987644
No 197
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=3.1e-37 Score=328.76 Aligned_cols=250 Identities=25% Similarity=0.363 Sum_probs=191.1
Q ss_pred EEEecccCcEEEEEEEEC----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcE
Q 001103 880 LQELGSGTFGTVYRGKWR----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~k----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~L 955 (1157)
..+||+|+||+||+|+.+ +..||+|.+..... ...+.+|+++++.++||||+++++++.......+
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~ 75 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----------SMSACREIALLRELKHPNVIALQKVFLSHSDRKV 75 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----------cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeE
Confidence 368999999999999874 35699998865321 1346789999999999999999999876556789
Q ss_pred EEEEEeecCCcchhhhcc--------ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 956 ATVTEYMVNGSLRHVLAR--------KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr--------~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
++||||+.+ +|.+++.. ....+++..++.++.||+.||.|||+++|+||||||+|||+..++...+.+||+
T Consensus 76 ~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~ 154 (317)
T cd07867 76 WLLFDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIA 154 (317)
T ss_pred EEEEeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEe
Confidence 999999875 77666642 123478899999999999999999999999999999999996444467799999
Q ss_pred ecCCcccccCCc----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh---------HH
Q 001103 1028 DFGLSRIKCNTL----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG---------AI 1094 (1157)
Q Consensus 1028 DFGLAkl~~~~~----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e---------ei 1094 (1157)
|||+++...... ......||+.|+|||++.+. ..++.++|||||||++|||++|++||...... ..
T Consensus 155 DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~ 233 (317)
T cd07867 155 DMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQ 233 (317)
T ss_pred eccceeccCCCcccccccCcceecccccCcHHhcCC-CccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHH
Confidence 999997643321 22345689999999998753 35789999999999999999999999753321 01
Q ss_pred HHHhhhc-----------------------CC-------------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHH
Q 001103 1095 IGGILSN-----------------------TL-------------RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITN 1138 (1157)
Q Consensus 1095 l~~Il~~-----------------------~l-------------rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe 1138 (1157)
+..+... .+ ........+..+.+||.+||+.||.+|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~ 313 (317)
T cd07867 234 LDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ 313 (317)
T ss_pred HHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence 1111000 00 00011123566889999999999999999999998
Q ss_pred HHH
Q 001103 1139 RLR 1141 (1157)
Q Consensus 1139 ~Lr 1141 (1157)
+.|
T Consensus 314 hp~ 316 (317)
T cd07867 314 DPY 316 (317)
T ss_pred CCC
Confidence 765
No 198
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=6.5e-37 Score=322.81 Aligned_cols=256 Identities=28% Similarity=0.529 Sum_probs=204.3
Q ss_pred CCeeEEEEecccCcEEEEEEEE------CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 875 SDLEELQELGSGTFGTVYRGKW------RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~------kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
.-|++++.||+|+||.||++++ .+..||+|.++... .......+.+|+++++.++||||+++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 76 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-------GGNHIADLKKEIEILRNLYHENIVKYKGICT 76 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-------cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEe
Confidence 4578899999999999999975 25669999886431 1122467889999999999999999999987
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
.......++||||+++++|.+++.+....+++..++.++.|++.||+|||++||+||||||+|||++ .++.+||+|
T Consensus 77 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~----~~~~~~l~d 152 (284)
T cd05079 77 EDGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE----SEHQVKIGD 152 (284)
T ss_pred cCCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc----CCCCEEECC
Confidence 7545678999999999999999876555689999999999999999999999999999999999998 667899999
Q ss_pred cCCcccccCCc----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--------------
Q 001103 1029 FGLSRIKCNTL----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH-------------- 1090 (1157)
Q Consensus 1029 FGLAkl~~~~~----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~-------------- 1090 (1157)
||++....... ......++..|+|||.+.+. .++.++|||||||++|+|++++.|+....
T Consensus 153 fg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd05079 153 FGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQS--KFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQM 230 (284)
T ss_pred CccccccccCccceeecCCCCCCccccCHHHhccC--CCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccc
Confidence 99987543321 12234577889999998754 57889999999999999999876643211
Q ss_pred hhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1091 CGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1091 ~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.................+..+++.+.+||.+||+.+|.+||+++++++.|+.+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 231 TVTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred cHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00111111222233345667899999999999999999999999999998764
No 199
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.4e-36 Score=315.85 Aligned_cols=253 Identities=32% Similarity=0.559 Sum_probs=209.9
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
.+...+|++.++||+|+||.||++.+. +..+|+|.+.... .....+.+|+++++.++|+||+++++.+..
T Consensus 2 ~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~---------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 72 (260)
T cd05073 2 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS---------MSVEAFLAEANVMKTLQHDKLVKLHAVVTK 72 (260)
T ss_pred cccccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh---------hHHHHHHHHHHHHHhcCCCCcceEEEEEcC
Confidence 456679999999999999999999874 5669999876431 123578889999999999999999999866
Q ss_pred CCCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
...+++|||+++++|.+++.+. ...+++..++.++.|++.||.|||++|++||||||+||+++ ..+.+||+|
T Consensus 73 ---~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~----~~~~~~l~d 145 (260)
T cd05073 73 ---EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS----ASLVCKIAD 145 (260)
T ss_pred ---CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc----CCCcEEECC
Confidence 4679999999999999998653 45578889999999999999999999999999999999998 678999999
Q ss_pred cCCcccccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1029 FGLSRIKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1029 FGLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
||++....... ......++..|+|||++.+. .++.++|+|||||++|+|++ |+.||...........+. .....
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~-~~~~~ 222 (260)
T cd05073 146 FGLARVIEDNEYTAREGAKFPIKWTAPEAINFG--SFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALE-RGYRM 222 (260)
T ss_pred CcceeeccCCCcccccCCcccccccCHhHhccC--CcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh-CCCCC
Confidence 99987543221 12223456789999998754 57889999999999999998 999999877666655544 33444
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
..+...+.++.+++.+||..+|++||++.++++.|..
T Consensus 223 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 5566788999999999999999999999999998865
No 200
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.3e-37 Score=322.99 Aligned_cols=252 Identities=25% Similarity=0.353 Sum_probs=199.1
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++++.||+|+||.||++++ .|..||+|+++..... +.....+.+|+.++++++||||+++++++.+ ..
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~------~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--~~ 72 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD------EGVPSSALREICLLKELKHKNIVRLYDVLHS--DK 72 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc------ccCccchhHHHHHHHhcCCCCeeeHHHHhcc--CC
Confidence 488999999999999999998 4778999998764211 1122456789999999999999999999987 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.++++|||+.+ +|.+++......+++..++.++.||+.||.|||+++|+||||||+|||++ .++.+||+|||++.
T Consensus 73 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~----~~~~~~l~dfg~~~ 147 (284)
T cd07839 73 KLTLVFEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN----KNGELKLADFGLAR 147 (284)
T ss_pred ceEEEEecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc----CCCcEEECccchhh
Confidence 89999999975 78777766556689999999999999999999999999999999999998 67789999999987
Q ss_pred cccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCC-CCChhHHHHHhhhcC---------
Q 001103 1034 IKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYA-NMHCGAIIGGILSNT--------- 1102 (1157)
Q Consensus 1034 l~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~-g~~~eeil~~Il~~~--------- 1102 (1157)
..... .......++..|+|||++.+. ..++.++|||||||++|+|++|..||. +....+.+..+....
T Consensus 148 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd07839 148 AFGIPVRCYSAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWP 226 (284)
T ss_pred ccCCCCCCcCCCccccCCcChHHHhCC-cccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhH
Confidence 54322 222334678999999998764 346889999999999999999988854 333333322221100
Q ss_pred ---------CCC---------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 ---------LRP---------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 ---------lrp---------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
..+ +....+++++++||.+||+.||.+|||+++++++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~ 283 (284)
T cd07839 227 GVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPY 283 (284)
T ss_pred HhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCC
Confidence 000 112346789999999999999999999999998765
No 201
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1.3e-36 Score=312.29 Aligned_cols=244 Identities=34% Similarity=0.615 Sum_probs=202.4
Q ss_pred EecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEE
Q 001103 882 ELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTE 960 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVME 960 (1157)
.||+|+||.||++... ++.+|+|++.... .......+.+|+++++.++||||+++++++.. ....++|||
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 72 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDL-------PQELKIKFLSEARILKQYDHPNIVKLIGVCTQ--RQPIYIVME 72 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcC-------CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec--CCccEEEEE
Confidence 6899999999999874 5679999876531 12223568899999999999999999999877 557899999
Q ss_pred eecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCcc
Q 001103 961 YMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLV 1040 (1157)
Q Consensus 961 YmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~ 1040 (1157)
|+++++|.+++......+++..++.++.|++.+|.|||++|++||||||+||+++ ..+.+||+|||++........
T Consensus 73 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~----~~~~~~l~d~g~~~~~~~~~~ 148 (250)
T cd05085 73 LVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG----ENNVLKISDFGMSRQEDDGIY 148 (250)
T ss_pred CCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc----CCCeEEECCCccceecccccc
Confidence 9999999999876656688999999999999999999999999999999999998 677899999999865333221
Q ss_pred c--CCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHH
Q 001103 1041 S--GGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRK 1117 (1157)
Q Consensus 1041 s--ts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrd 1117 (1157)
. ....++..|+|||++.+. .++.++||||||+++|+|++ |..||...........+. ...+...+..++..+.+
T Consensus 149 ~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 225 (250)
T cd05085 149 SSSGLKQIPIKWTAPEALNYG--RYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE-KGYRMSCPQKCPDDVYK 225 (250)
T ss_pred ccCCCCCCcccccCHHHhccC--CCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH-cCCCCCCCCCCCHHHHH
Confidence 1 112346679999998754 57889999999999999998 999998877666555544 34445566778999999
Q ss_pred HHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1118 LMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1118 LIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
|+.+||+.+|.+||++.++++.|.
T Consensus 226 li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 226 VMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHcccCcccCCCHHHHHHHhc
Confidence 999999999999999999998874
No 202
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=9e-37 Score=318.30 Aligned_cols=253 Identities=34% Similarity=0.564 Sum_probs=210.3
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeee
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGV 946 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygv 946 (1157)
..+|++++.||+|+||.||+++.+ ...+|+|.+... ..+.....+.+|++++++++||||++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-------~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 76 (275)
T cd05046 4 RSNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT-------KDENLQSEFRRELDMFRKLSHKNVVRLLGL 76 (275)
T ss_pred hHhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc-------cchHHHHHHHHHHHHHHhcCCcceeeeEEE
Confidence 468899999999999999999873 345888876543 112345678899999999999999999999
Q ss_pred eecCCCCcEEEEEEeecCCcchhhhcccc--------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCC
Q 001103 947 VPNGPGGTMATVTEYMVNGSLRHVLARKD--------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRD 1018 (1157)
Q Consensus 947 f~de~~~~LyLVMEYmeGGSL~dlLkr~g--------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd 1018 (1157)
+.+ ....++||||+++++|.+++.... ..+++..++.++.|++.||+|||+++|+||||||+|||++
T Consensus 77 ~~~--~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~--- 151 (275)
T cd05046 77 CRE--AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS--- 151 (275)
T ss_pred ECC--CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---
Confidence 877 567899999999999999986543 1589999999999999999999999999999999999998
Q ss_pred CCCCeEEEEecCCcccccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHH
Q 001103 1019 PQRPICKVGDFGLSRIKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAII 1095 (1157)
Q Consensus 1019 ~e~g~VKLiDFGLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil 1095 (1157)
..+.++|+|||++....... ......++..|+|||.+.+. .++.++||||||+++|+|++ |..||.........
T Consensus 152 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~ 228 (275)
T cd05046 152 -SQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQED--DFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVL 228 (275)
T ss_pred -CCCcEEEcccccccccCcccccccCCceeEEeecChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCCccccchHHHH
Confidence 67789999999986433221 22334567789999998754 46889999999999999998 89999877766666
Q ss_pred HHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1096 GGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1096 ~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
..+.........+..++..+.++|.+||+.+|.+||++.++++.|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 229 NRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 6665555555556678999999999999999999999999999875
No 203
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.8e-37 Score=323.38 Aligned_cols=250 Identities=25% Similarity=0.421 Sum_probs=212.4
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++.+.||+|+||.||++.+ .++.+|+|++.+.... .......+.+|++++++++||||+++++++.+ .
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 73 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIV-----KLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD--D 73 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhh-----hhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--C
Confidence 3789999999999999999988 4678999998764221 12234678899999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+.+++|.+++.+. ..+++..+..++.|++.||.|||++||+|+||||.|||++ .++.+||+|||++
T Consensus 74 ~~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~----~~~~~kl~dfg~~ 148 (290)
T cd05580 74 SNLYLVMEYVPGGELFSHLRKS-GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD----SDGYIKITDFGFA 148 (290)
T ss_pred CeEEEEEecCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC----CCCCEEEeeCCCc
Confidence 6899999999999999998765 4589999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCc
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iS 1112 (1157)
...... .....|++.|+|||.+.+. .++.++|+||||+++|+|++|+.||...........+... ...++..++
T Consensus 149 ~~~~~~--~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~ 222 (290)
T cd05580 149 KRVKGR--TYTLCGTPEYLAPEIILSK--GYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEG--KVRFPSFFS 222 (290)
T ss_pred cccCCC--CCCCCCCccccChhhhcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcC--CccCCccCC
Confidence 765444 3345799999999998754 5688999999999999999999999887766666655533 335667789
Q ss_pred HHHHHHHHHHhccCCCCCC-----CHHHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARP-----SFTEITNRLRV 1142 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRP-----SaeELLe~Lr~ 1142 (1157)
+.++++|.+||..||.+|+ ++++++++.+.
T Consensus 223 ~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~ 257 (290)
T cd05580 223 PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWF 257 (290)
T ss_pred HHHHHHHHHHccCCHHHccCcccCCHHHHHcCccc
Confidence 9999999999999999998 89999988663
No 204
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.5e-37 Score=332.65 Aligned_cols=253 Identities=21% Similarity=0.370 Sum_probs=198.4
Q ss_pred EEEEeccc--CcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 879 ELQELGSG--TFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 879 ILrkLGsG--sFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
++++||+| +|++||++++ +|..||||+++.... .......+.+|+.+++.++||||+++++++.. .+.
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~--~~~ 73 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC------TNEMVTFLQGELHVSKLFNHPNIVPYRATFIA--DNE 73 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc------cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE--CCE
Confidence 56789999 7899999987 467799999875421 12234567789999999999999999999987 568
Q ss_pred EEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 955 MATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
+++||||+++++|.+++... ...+++..++.++.|++.||.|||+++|+||||||+|||++ .++.++|+||+.+.
T Consensus 74 ~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~----~~~~~~l~~~~~~~ 149 (327)
T cd08227 74 LWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS----VDGKVYLSGLRSNL 149 (327)
T ss_pred EEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe----cCCcEEEcccchhh
Confidence 99999999999999998653 34588999999999999999999999999999999999998 66789999998654
Q ss_pred cccCC--------cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC-
Q 001103 1034 IKCNT--------LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR- 1104 (1157)
Q Consensus 1034 l~~~~--------~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr- 1104 (1157)
..... .......++..|+|||++.+....++.++|||||||++|+|++|+.||.................+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 229 (327)
T cd08227 150 SMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC 229 (327)
T ss_pred ccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccc
Confidence 32111 011123467889999999754345789999999999999999999999865543332222211110
Q ss_pred -------------------------------------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1105 -------------------------------------------PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1105 -------------------------------------------peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
......+++++.+||.+||+.||.+|||+++++++.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~ 309 (327)
T cd08227 230 LLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF 309 (327)
T ss_pred cccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChh
Confidence 0112235678999999999999999999999999877
Q ss_pred HH
Q 001103 1142 VM 1143 (1157)
Q Consensus 1142 ~L 1143 (1157)
..
T Consensus 310 f~ 311 (327)
T cd08227 310 FK 311 (327)
T ss_pred hh
Confidence 64
No 205
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.3e-36 Score=326.84 Aligned_cols=261 Identities=30% Similarity=0.530 Sum_probs=212.5
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC---------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCce
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR---------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNV 940 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k---------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNI 940 (1157)
.+...+|.+.+.||+|+||.||++++. ...+|+|.++... . ......+.+|+++++.+ +||||
T Consensus 8 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~----~---~~~~~~~~~E~~~l~~l~~h~~i 80 (314)
T cd05099 8 EFPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA----T---DKDLADLISEMELMKLIGKHKNI 80 (314)
T ss_pred cccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC----C---hHHHHHHHHHHHHHHhccCCCCe
Confidence 445578999999999999999999762 2358999876431 1 12245678899999999 69999
Q ss_pred eEEeeeeecCCCCcEEEEEEeecCCcchhhhccc---------------cccccHHHHHHHHHHHHHHHHHHHHCCceec
Q 001103 941 VAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARK---------------DRILDRRKKLMLMMDAAFGMEYLHMKNIVHF 1005 (1157)
Q Consensus 941 VkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~---------------gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHR 1005 (1157)
+++++++.. .+.++++|||+.+++|.+++... ...+++..+..++.|++.||.|||++||+||
T Consensus 81 v~~~~~~~~--~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~ 158 (314)
T cd05099 81 INLLGVCTQ--EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHR 158 (314)
T ss_pred eeEEEEEcc--CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 999999876 56789999999999999988642 1347888999999999999999999999999
Q ss_pred cCCccceeeccCCCCCCeEEEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-
Q 001103 1006 DLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT- 1081 (1157)
Q Consensus 1006 DLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT- 1081 (1157)
||||+|||++ .++.+||+|||+++....... .....++..|+|||++.+. .++.++|||||||++|+|++
T Consensus 159 dlkp~Nill~----~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DiwslG~~l~el~~~ 232 (314)
T cd05099 159 DLAARNVLVT----EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDR--VYTHQSDVWSFGILMWEIFTL 232 (314)
T ss_pred cccceeEEEc----CCCcEEEccccccccccccccccccccCCCCccccCHHHHccC--CcCccchhhHHHHHHHHHHhC
Confidence 9999999998 677899999999975432211 1112345679999998754 57889999999999999999
Q ss_pred CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1082 GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1082 Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
|..||...........+... .....+..++.++++||.+||+.+|.+|||+.++++.|..+....
T Consensus 233 g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 233 GGSPYPGIPVEELFKLLREG-HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred CCCCCCCCCHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 89999887776666655443 334566778899999999999999999999999999999887544
No 206
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=8.9e-37 Score=320.07 Aligned_cols=256 Identities=26% Similarity=0.435 Sum_probs=204.1
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPN 949 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~d 949 (1157)
...+|++++.||+|+||.||++++ .++.+|+|++.... .....+.+|+.+++.+ +||||+++++++..
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---------~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---------DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---------chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 346899999999999999999988 46789999876421 1124567899999999 69999999998743
Q ss_pred ---CCCCcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCe
Q 001103 950 ---GPGGTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPI 1023 (1157)
Q Consensus 950 ---e~~~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~ 1023 (1157)
......++||||+++++|.+++.. ....+++..++.++.|++.||.|||+++|+||||||+||+++ ..+.
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~----~~~~ 162 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT----TEGG 162 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC----CCCC
Confidence 224578999999999999988753 234588899999999999999999999999999999999998 6678
Q ss_pred EEEEecCCcccccCC-cccCCCCCCCcccCcccccCC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhh
Q 001103 1024 CKVGDFGLSRIKCNT-LVSGGVRGTLPWMAPELLNGS---NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGIL 1099 (1157)
Q Consensus 1024 VKLiDFGLAkl~~~~-~~sts~~GTp~YmAPEVL~G~---~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il 1099 (1157)
+||+|||++...... .......|++.|+|||++... ...++.++|||||||++|+|++|+.||........+..+.
T Consensus 163 ~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~ 242 (286)
T cd06638 163 VKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIP 242 (286)
T ss_pred EEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhcc
Confidence 999999998754322 223345699999999998532 2347889999999999999999999998766544433332
Q ss_pred hcC-CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1100 SNT-LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1100 ~~~-lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
... .....+..++..+.+||.+||+.||.+|||+.+++++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~ 285 (286)
T cd06638 243 RNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVF 285 (286)
T ss_pred ccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhccc
Confidence 221 122234556789999999999999999999999999875
No 207
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.9e-37 Score=316.62 Aligned_cols=255 Identities=26% Similarity=0.415 Sum_probs=207.1
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNG 950 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de 950 (1157)
..+|++.+.||+|+||.||+|.++ +..+++|++..... ....+.+|+.+++++ .||||+++++++...
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 75 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---------EEEEIKEEYNILRKYSNHPNIATFYGAFIKK 75 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---------hHHHHHHHHHHHHHhcCCCChheEEEEEEec
Confidence 368999999999999999999984 56799998875411 135678999999999 799999999998763
Q ss_pred C----CCcEEEEEEeecCCcchhhhccc---cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCe
Q 001103 951 P----GGTMATVTEYMVNGSLRHVLARK---DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPI 1023 (1157)
Q Consensus 951 ~----~~~LyLVMEYmeGGSL~dlLkr~---gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~ 1023 (1157)
. ...+++||||+++++|.+++... ...+++..++.++.|++.||.|||+++|+|+||+|+||+++ .++.
T Consensus 76 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~----~~~~ 151 (275)
T cd06608 76 NPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT----KNAE 151 (275)
T ss_pred CCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc----cCCe
Confidence 3 34689999999999999888653 35689999999999999999999999999999999999998 6778
Q ss_pred EEEEecCCcccccCC-cccCCCCCCCcccCcccccCC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhh
Q 001103 1024 CKVGDFGLSRIKCNT-LVSGGVRGTLPWMAPELLNGS---NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGIL 1099 (1157)
Q Consensus 1024 VKLiDFGLAkl~~~~-~~sts~~GTp~YmAPEVL~G~---~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il 1099 (1157)
+||+|||++...... .......|+..|+|||++.+. ...++.++|||||||+||+|++|+.||...........+.
T Consensus 152 ~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~ 231 (275)
T cd06608 152 VKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIP 231 (275)
T ss_pred EEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhh
Confidence 999999998754322 222345689999999987542 2346788999999999999999999998766555555554
Q ss_pred hcCCCC-CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1100 SNTLRP-QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1100 ~~~lrp-eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
...... ..+..+++++++||.+||..||.+|||+.+++++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~ 274 (275)
T cd06608 232 RNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHPF 274 (275)
T ss_pred ccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCC
Confidence 332211 223347889999999999999999999999998754
No 208
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=1.4e-36 Score=318.35 Aligned_cols=260 Identities=25% Similarity=0.464 Sum_probs=212.8
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECC------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRG------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYG 945 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kG------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLyg 945 (1157)
+...+|++.+.||+|+||.||+|.+.. ..|++|+++... .......+.+|+.+++.++||||+++++
T Consensus 3 ~~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~-------~~~~~~~~~~e~~~l~~l~h~ni~~~~~ 75 (280)
T cd05043 3 ISRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHA-------SEIQVTLLLQESCLLYGLSHQNILPILH 75 (280)
T ss_pred cchhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCC-------CHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 345789999999999999999998843 568999876421 1223467889999999999999999999
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhcccc-------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCC
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKD-------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRD 1018 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~g-------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd 1018 (1157)
++... ....+++++|+.+++|.+++.... ..+++..++.++.|++.||+|||+++++||||||+|||++
T Consensus 76 ~~~~~-~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~--- 151 (280)
T cd05043 76 VCIED-GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID--- 151 (280)
T ss_pred EEecC-CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---
Confidence 87654 456889999999999999886532 4588999999999999999999999999999999999998
Q ss_pred CCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHH
Q 001103 1019 PQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAI 1094 (1157)
Q Consensus 1019 ~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eei 1094 (1157)
+.+.+||+|||+++...... ......++..|+|||.+.+. .++.++|||||||++|+|++ |++||........
T Consensus 152 -~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~ 228 (280)
T cd05043 152 -EELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNK--EYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEM 228 (280)
T ss_pred -CCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcC--CCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHH
Confidence 66899999999997543221 11223467789999998753 57899999999999999999 9999987766555
Q ss_pred HHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1095 IGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1095 l~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
...+. ...+...+..+++++++++.+||..||++|||+.++++.|..+...
T Consensus 229 ~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 229 AAYLK-DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred HHHHH-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 54443 3444445666789999999999999999999999999999988753
No 209
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.8e-37 Score=341.62 Aligned_cols=252 Identities=21% Similarity=0.283 Sum_probs=199.9
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
...+|++++.||+|+||.||++... +..||+|.+... ....+|+++|+.|+|||||++++++.
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------------~~~~~E~~il~~l~h~~iv~~~~~~~ 156 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------------KTPGREIDILKTISHRAIINLIHAYR 156 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------------ccHHHHHHHHHhcCCCCccceeeeEe
Confidence 4468999999999999999999764 355888887643 22457999999999999999999988
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
. ....|++||++. ++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|
T Consensus 157 ~--~~~~~lv~e~~~-~~l~~~l~-~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~----~~~~~~l~D 228 (392)
T PHA03207 157 W--KSTVCMVMPKYK-CDLFTYVD-RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD----EPENAVLGD 228 (392)
T ss_pred e--CCEEEEEehhcC-CCHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc----CCCCEEEcc
Confidence 7 568999999996 57888874 345689999999999999999999999999999999999998 677999999
Q ss_pred cCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh---HHHHHhhhc-
Q 001103 1029 FGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG---AIIGGILSN- 1101 (1157)
Q Consensus 1029 FGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e---eil~~Il~~- 1101 (1157)
||++....... ......||+.|+|||++.+. .++.++|||||||+||||++|+.||.+.... ..+..+...
T Consensus 229 fG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~ 306 (392)
T PHA03207 229 FGAACKLDAHPDTPQCYGWSGTLETNSPELLALD--PYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCM 306 (392)
T ss_pred CccccccCcccccccccccccccCccCHhHhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHh
Confidence 99987543321 22346799999999999754 5789999999999999999999999765421 111111110
Q ss_pred ------------------------CCCCC--CC-----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1102 ------------------------TLRPQ--IP-----ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1102 ------------------------~lrpe--ip-----~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
..++. ++ ...+.++++||.+||..||.+|||+.+++.+.++.....
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~ 383 (392)
T PHA03207 307 QVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPI 383 (392)
T ss_pred ccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccch
Confidence 00110 11 234678899999999999999999999999998865443
No 210
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.1e-36 Score=325.57 Aligned_cols=256 Identities=23% Similarity=0.393 Sum_probs=212.9
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||+||++... +..||+|.+.+.... .......+.+|+++++.++||||+++++.+.. .
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 73 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMI-----KRNKVKRVLTEQEILATLDHPFLPTLYASFQT--E 73 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccc-----hHHHHHHHHHHHHHHHhCCCCCchhheeeeec--C
Confidence 37899999999999999999884 678999998765221 12235678899999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 953 GTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
...|+||||+.+++|.+++.+. ...+++..++.++.|++.||.|||++|++|+||||+|||++ .++.++|+|||+
T Consensus 74 ~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~----~~~~~~l~dfg~ 149 (316)
T cd05574 74 TYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH----ESGHIMLSDFDL 149 (316)
T ss_pred CEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc----CCCCEEEeecch
Confidence 6899999999999999998753 35689999999999999999999999999999999999998 677899999998
Q ss_pred cccccCCc------------------------------ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc
Q 001103 1032 SRIKCNTL------------------------------VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT 1081 (1157)
Q Consensus 1032 Akl~~~~~------------------------------~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT 1081 (1157)
+....... ....+.||..|+|||++.+. .++.++||||||+++|+|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Di~slG~ll~~l~~ 227 (316)
T cd05574 150 SKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD--GHGSAVDWWTLGILLYEMLY 227 (316)
T ss_pred hhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC--CCCchHHHHHHHHHHHHHhh
Confidence 86432110 11234689999999999754 56889999999999999999
Q ss_pred CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCC----HHHHHHHHHHH
Q 001103 1082 GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPS----FTEITNRLRVM 1143 (1157)
Q Consensus 1082 Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPS----aeELLe~Lr~L 1143 (1157)
|+.||........+..+............+++.+++||.+||..||++||+ +++++++.+.-
T Consensus 228 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~ 293 (316)
T cd05574 228 GTTPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293 (316)
T ss_pred CCCCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhh
Confidence 999999888777776666554433333347899999999999999999999 99999986653
No 211
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.6e-36 Score=318.45 Aligned_cols=259 Identities=31% Similarity=0.549 Sum_probs=214.3
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC--Cc----eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEe
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR--GT----DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFY 944 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k--Gt----~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLy 944 (1157)
.++..+|++++.||+|+||+||+|.++ |. .+|+|++..... ......+.+|+.++++++||||++++
T Consensus 3 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~ 75 (279)
T cd05057 3 ILKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS-------PKANKEILDEAYVMASVDHPHVVRLL 75 (279)
T ss_pred ccCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC-------HHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 456678999999999999999999873 32 488888765421 22346788999999999999999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
+++.. ...+++|||+.+|+|.+++.+....+++..++.++.|++.||+|||+++|+||||||+|||++ ..+.+
T Consensus 76 ~~~~~---~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~----~~~~~ 148 (279)
T cd05057 76 GICLS---SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK----TPQHV 148 (279)
T ss_pred EEEec---CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc----CCCeE
Confidence 99876 468899999999999999987666689999999999999999999999999999999999998 66789
Q ss_pred EEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhh
Q 001103 1025 KVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILS 1100 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~ 1100 (1157)
||+|||+++....... .....++..|+|||.+.. ..++.++|+||||+++|||++ |+.||......+....+..
T Consensus 149 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~--~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 226 (279)
T cd05057 149 KITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILH--RIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK 226 (279)
T ss_pred EECCCcccccccCcccceecCCCcccccccCHHHhhc--CCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC
Confidence 9999999975433221 112224568999998864 357889999999999999998 9999998877666555543
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1101 NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1101 ~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
......+..++..+.+++.+||..+|.+||++.++++.|..+...
T Consensus 227 -~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 227 -GERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred -CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 333455666889999999999999999999999999999988653
No 212
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7e-38 Score=346.19 Aligned_cols=257 Identities=25% Similarity=0.358 Sum_probs=210.6
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec--
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN-- 949 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d-- 949 (1157)
...|..++.||+|+||.|..+.+ +|..||||.+... + +.....++..||+++|+.++|+||+.+++++..
T Consensus 21 ~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~-F-----~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~ 94 (359)
T KOG0660|consen 21 PRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP-F-----ENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPS 94 (359)
T ss_pred cceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh-h-----hchHHHHHHHHHHHHHHHhcCCCcceEEeeccccc
Confidence 34566689999999999999888 4778999988743 1 123345788899999999999999999999866
Q ss_pred -CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 950 -GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 950 -e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
+.-.-+|+|+|+| +.+|..+++.. +.++...+..++.||++||+|+|+.+|+||||||.|+|++ .+..+||||
T Consensus 95 ~~~f~DvYiV~elM-etDL~~iik~~-~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n----~~c~lKI~D 168 (359)
T KOG0660|consen 95 RDKFNDVYLVFELM-ETDLHQIIKSQ-QDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLN----ADCDLKICD 168 (359)
T ss_pred ccccceeEEehhHH-hhHHHHHHHcC-ccccHHHHHHHHHHHHHhcchhhcccccccccchhheeec----cCCCEEecc
Confidence 2244689999999 44898888654 4489999999999999999999999999999999999999 777899999
Q ss_pred cCCcccccC---CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc----
Q 001103 1029 FGLSRIKCN---TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN---- 1101 (1157)
Q Consensus 1029 FGLAkl~~~---~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~---- 1101 (1157)
||+|+.... ....+..+.|.+|.|||++... ..|+..+||||+||||.||++|++.|.+.+....+..|+.-
T Consensus 169 FGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~-~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP 247 (359)
T KOG0660|consen 169 FGLARYLDKFFEDGFMTEYVATRWYRAPELLLNS-SEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP 247 (359)
T ss_pred ccceeeccccCcccchhcceeeeeecCHHHHhcc-ccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC
Confidence 999997653 4455678899999999998754 57899999999999999999999999987765555444321
Q ss_pred --------------------CCCCC-----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1102 --------------------TLRPQ-----IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1102 --------------------~lrpe-----ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
...+. +-...++.+.+|+++||.+||.+|+|+++.|.|+...
T Consensus 248 ~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~hPYl~ 314 (359)
T KOG0660|consen 248 SEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAHPYLA 314 (359)
T ss_pred CHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcChhhh
Confidence 11111 1135788999999999999999999999999987543
No 213
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.4e-37 Score=321.26 Aligned_cols=251 Identities=24% Similarity=0.376 Sum_probs=202.9
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||.||++++ .++.||+|+++.... .....+.+|+.+++.++||||+++++.+.. .
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--------~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~--~ 78 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--------EDFAVVQQEIIMMKDCKHSNIVAYFGSYLR--R 78 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--------hHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--C
Confidence 4788889999999999999988 467799999875411 112456789999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+..+++|||+++++|.+++...+ .+++..++.++.|++.||.|||++||+|+||||+|||++ ..+.+||+|||++
T Consensus 79 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~----~~~~~~l~dfg~~ 153 (267)
T cd06645 79 DKLWICMEFCGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT----DNGHVKLADFGVS 153 (267)
T ss_pred CEEEEEEeccCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC----CCCCEEECcceee
Confidence 68999999999999999986544 589999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCC-C--
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGS-NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQ-I-- 1107 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~-~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpe-i-- 1107 (1157)
....... ......|+..|+|||++... ...++.++|+|||||++|+|++|..||........+.........+. .
T Consensus 154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
T cd06645 154 AQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKD 233 (267)
T ss_pred eEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccc
Confidence 6543221 22345799999999987421 23478899999999999999999999976654444333332222221 1
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
...++..+++||.+||+.+|.+||++++|+++.
T Consensus 234 ~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~ 266 (267)
T cd06645 234 KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHP 266 (267)
T ss_pred cCCCCHHHHHHHHHHccCCchhCcCHHHHhcCC
Confidence 124678899999999999999999999999864
No 214
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=7.3e-37 Score=316.17 Aligned_cols=247 Identities=33% Similarity=0.619 Sum_probs=207.9
Q ss_pred cCCCeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
...+|++.+.||+|+||.||++...+..||+|.++... ....+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~----------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-- 71 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV----------TAQAFLEETAVMTKLHHKNLVRLLGVILHN-- 71 (254)
T ss_pred cHHHceeeeeeccCCCCceEecccCCCceEEEeecCcc----------hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC--
Confidence 34679999999999999999999999999999886431 125678899999999999999999998652
Q ss_pred CcEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 953 GTMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
..+++|||+.+++|.+++.... ..+++..++.++.|++.||.|||++|++||||||+|||++ .++.+||+|||+
T Consensus 72 -~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~----~~~~~kl~Dfg~ 146 (254)
T cd05083 72 -GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS----EDGVAKVSDFGL 146 (254)
T ss_pred -CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc----CCCcEEECCCcc
Confidence 4689999999999999987543 4588999999999999999999999999999999999998 677899999999
Q ss_pred cccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCC
Q 001103 1032 SRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPER 1110 (1157)
Q Consensus 1032 Akl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~ 1110 (1157)
+...... ......+..|+|||.+.+. .++.++|+|||||++|+|++ |++||...........+.. ...+..+..
T Consensus 147 ~~~~~~~--~~~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~ 221 (254)
T cd05083 147 ARVGSMG--VDNSKLPVKWTAPEALKHK--KFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEK-GYRMEPPEG 221 (254)
T ss_pred ceecccc--CCCCCCCceecCHHHhccC--CcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhC-CCCCCCCCc
Confidence 8754322 1223356789999998753 57889999999999999997 9999988877666555543 344555667
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+++.+.+||.+||+.+|.+||++++|+..|+
T Consensus 222 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 222 CPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 8999999999999999999999999999875
No 215
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.3e-37 Score=376.15 Aligned_cols=266 Identities=20% Similarity=0.300 Sum_probs=214.5
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
......+|++++.||+|+||+||++++. +..+|+|++...... ......+.+|+.+|+.|+|||||+++++|
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~------e~~~~~~~~EI~IL~~L~HPNIVrl~d~f 81 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK------EREKSQLVIEVNVMRELKHKNIVRYIDRF 81 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC------HHHHHHHHHHHHHHHHcCCCCcCeEEEEE
Confidence 3445579999999999999999999984 556999998764221 22346788999999999999999999998
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccc---cccccHHHHHHHHHHHHHHHHHHHHC-------CceeccCCccceeeccC
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARK---DRILDRRKKLMLMMDAAFGMEYLHMK-------NIVHFDLKCDNLLVNLR 1017 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~---gr~L~e~qVlkIa~QLa~ALeYLHSk-------GIIHRDLKPENILLd~d 1017 (1157)
.+.....+||||||+.+++|.++|... ...+++..++.|+.||+.||.|||+. +||||||||+||||+.+
T Consensus 82 ~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~ 161 (1021)
T PTZ00266 82 LNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTG 161 (1021)
T ss_pred EecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecC
Confidence 776567899999999999999988652 34689999999999999999999985 49999999999999632
Q ss_pred C-------------CCCCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCC
Q 001103 1018 D-------------PQRPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEE 1084 (1157)
Q Consensus 1018 d-------------~e~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~ 1084 (1157)
. .....+||+|||++.............||+.|+|||++.+....++.++||||||||||+|++|+.
T Consensus 162 ~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~ 241 (1021)
T PTZ00266 162 IRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKT 241 (1021)
T ss_pred ccccccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCC
Confidence 1 123469999999998655444444567999999999987655568899999999999999999999
Q ss_pred CCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1085 PYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1085 PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
||........+...+....... ....++++.+||..||..+|.+||++.++|.+.+.
T Consensus 242 PF~~~~~~~qli~~lk~~p~lp-i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~i 298 (1021)
T PTZ00266 242 PFHKANNFSQLISELKRGPDLP-IKGKSKELNILIKNLLNLSAKERPSALQCLGYQII 298 (1021)
T ss_pred CCCcCCcHHHHHHHHhcCCCCC-cCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHH
Confidence 9987665444444333322222 23468999999999999999999999999987554
No 216
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=7.2e-37 Score=320.82 Aligned_cols=254 Identities=24% Similarity=0.367 Sum_probs=204.4
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC-
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNG- 950 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de- 950 (1157)
..|++.+.||+|+||.||++++ .+..+|+|++.... .....+..|+.+++++ +||||+++++++...
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---------DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---------HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 5788899999999999999998 46779999886531 1235577899999998 799999999998542
Q ss_pred ---CCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 951 ---PGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 951 ---~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
....+|++|||+.+++|.+++... ...+++..++.++.||+.||.|||+++|+||||||+||+++ ..+.++|
T Consensus 87 ~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~----~~~~~~l 162 (282)
T cd06636 87 PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT----ENAEVKL 162 (282)
T ss_pred ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC----CCCCEEE
Confidence 245789999999999999988653 34578888999999999999999999999999999999998 6778999
Q ss_pred EecCCcccccCC-cccCCCCCCCcccCcccccCC---CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC
Q 001103 1027 GDFGLSRIKCNT-LVSGGVRGTLPWMAPELLNGS---NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT 1102 (1157)
Q Consensus 1027 iDFGLAkl~~~~-~~sts~~GTp~YmAPEVL~G~---~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~ 1102 (1157)
+|||++...... .......|++.|+|||.+... ...++.++|+|||||++|+|++|..||........+..+....
T Consensus 163 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~ 242 (282)
T cd06636 163 VDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP 242 (282)
T ss_pred eeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCC
Confidence 999998754322 223345689999999987532 2357889999999999999999999997765544443333332
Q ss_pred CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
........++.++.+||.+||+.||.+||++.+|+++.|
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~ 281 (282)
T cd06636 243 PPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPF 281 (282)
T ss_pred CCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCC
Confidence 333334568899999999999999999999999998754
No 217
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=8.5e-37 Score=345.97 Aligned_cols=260 Identities=30% Similarity=0.477 Sum_probs=213.7
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEECC-------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCcee
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKWRG-------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVV 941 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~kG-------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIV 941 (1157)
+.+...+|.+.+.||+|+||.||+|++.+ ..||||+++.... ......+.+|+++|.++. |||||
T Consensus 32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~-------~~~~~~~~~E~~~l~~l~~H~niv 104 (401)
T cd05107 32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR-------SSEKQALMSELKIMSHLGPHLNIV 104 (401)
T ss_pred ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC-------hhHHHHHHHHHHHHHhcCCCCCeE
Confidence 34455678889999999999999998743 4699999975311 112356789999999997 99999
Q ss_pred EEeeeeecCCCCcEEEEEEeecCCcchhhhcccc----------------------------------------------
Q 001103 942 AFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------------------------------------- 975 (1157)
Q Consensus 942 kLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------------------------------------- 975 (1157)
++++++.. .+.+++||||+.+|+|.+++.+..
T Consensus 105 ~~~~~~~~--~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (401)
T cd05107 105 NLLGACTK--GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMS 182 (401)
T ss_pred EEEEEEcc--CCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccC
Confidence 99999987 457999999999999999885431
Q ss_pred ---------------------------------------------------ccccHHHHHHHHHHHHHHHHHHHHCCcee
Q 001103 976 ---------------------------------------------------RILDRRKKLMLMMDAAFGMEYLHMKNIVH 1004 (1157)
Q Consensus 976 ---------------------------------------------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIH 1004 (1157)
..+++..++.++.||+.||.|||+++|+|
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH 262 (401)
T cd05107 183 KDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVH 262 (401)
T ss_pred CccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCc
Confidence 23567778899999999999999999999
Q ss_pred ccCCccceeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc
Q 001103 1005 FDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT 1081 (1157)
Q Consensus 1005 RDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT 1081 (1157)
|||||+|||++ ..+.+||+|||+++...... ......++..|+|||.+.+. .++.++|||||||++|||++
T Consensus 263 rdlkp~NiLl~----~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslGvil~e~l~ 336 (401)
T cd05107 263 RDLAARNVLIC----EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNN--LYTTLSDVWSFGILLWEIFT 336 (401)
T ss_pred ccCCcceEEEe----CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCC--CCCcHhHHHHHHHHHHHHHH
Confidence 99999999998 67789999999997532211 12234578899999998754 57899999999999999998
Q ss_pred -CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1082 -GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1082 -Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
|..||......+.....+....++..+..++.++.+||.+||..+|.+||++++|++.|+.+.
T Consensus 337 ~g~~P~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 337 LGGTPYPELPMNEQFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred cCCCCCCCCCchHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 899998776666555555556666677788999999999999999999999999999998764
No 218
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.7e-37 Score=324.54 Aligned_cols=254 Identities=30% Similarity=0.508 Sum_probs=203.2
Q ss_pred cCCCeeEEEEecccCcEEEEEEEECC----------------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWRG----------------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH 936 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~kG----------------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~ 936 (1157)
...+|++.++||+|+||.||++++.+ ..||+|+++... . ......+.+|++++++++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~---~~~~~~~~~ei~~l~~l~ 75 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV----T---KTARNDFLKEIKIMSRLK 75 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC----C---HHHHHHHHHHHHHHHhCC
Confidence 44689999999999999999987632 238999886531 1 223467889999999999
Q ss_pred CCceeEEeeeeecCCCCcEEEEEEeecCCcchhhhcccc-----------ccccHHHHHHHHHHHHHHHHHHHHCCceec
Q 001103 937 HPNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD-----------RILDRRKKLMLMMDAAFGMEYLHMKNIVHF 1005 (1157)
Q Consensus 937 HPNIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g-----------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHR 1005 (1157)
||||+++++++.. ....++||||+.+++|.+++.... ..+++..++.++.|++.||.|||+++++||
T Consensus 76 h~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~ 153 (295)
T cd05097 76 NPNIIRLLGVCVS--DDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHR 153 (295)
T ss_pred CCCcCeEEEEEcC--CCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeecc
Confidence 9999999999877 567899999999999999885432 236788899999999999999999999999
Q ss_pred cCCccceeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-
Q 001103 1006 DLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT- 1081 (1157)
Q Consensus 1006 DLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT- 1081 (1157)
||||+|||++ .++.+||+|||++....... ......++..|+|||++.+. .++.++|+|||||++|+|++
T Consensus 154 dlkp~Nill~----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwSlG~~l~el~~~ 227 (295)
T cd05097 154 DLATRNCLVG----NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLG--KFTTASDVWAFGVTLWEMFTL 227 (295)
T ss_pred ccChhhEEEc----CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccC--CcCchhhHHHHHHHHHHHHHc
Confidence 9999999998 66789999999987533221 12223457789999998754 57899999999999999988
Q ss_pred -CCCCCCCCChhHHHHHhhh------cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1082 -GEEPYANMHCGAIIGGILS------NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1082 -Gk~PF~g~~~eeil~~Il~------~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
|..||........+..+.. .......+..+++.+++||.+||+.||.+|||++++++.|+
T Consensus 228 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 228 CKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 6789987766555544321 11112334557899999999999999999999999999885
No 219
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.2e-36 Score=316.83 Aligned_cols=259 Identities=27% Similarity=0.476 Sum_probs=208.4
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCC--ChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGR--SSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r--~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
+|.+.+.||+|+||.||+|.. .+..+|+|.++....... ........+.+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 577889999999999999977 477899998865322111 12223345678899999999999999999999877
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
....++||||+.+++|.+++.+.+ .+++..+..++.|++.||.|||+++++||||||+||+++ .++.++|+|||+
T Consensus 80 ~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~----~~~~~~l~d~~~ 154 (272)
T cd06629 80 EEYLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD----ADGICKISDFGI 154 (272)
T ss_pred CCceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc----CCCeEEEeeccc
Confidence 568899999999999999987654 588899999999999999999999999999999999998 678999999999
Q ss_pred cccccCC---cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCC--
Q 001103 1032 SRIKCNT---LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQ-- 1106 (1157)
Q Consensus 1032 Akl~~~~---~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpe-- 1106 (1157)
+...... .......|+..|+|||.+......++.++|+||||+++|+|++|..||...........+........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 234 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIP 234 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCC
Confidence 8754322 11233568899999999875444578899999999999999999999976655444433332322222
Q ss_pred --CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1107 --IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1107 --ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
....++.+++++|.+||..+|.+||++++++++.+
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 271 (272)
T cd06629 235 PDVSMNLSPVALDFLNACFTINPDNRPTARELLQHPF 271 (272)
T ss_pred ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCC
Confidence 23346889999999999999999999999998754
No 220
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.2e-36 Score=317.63 Aligned_cols=253 Identities=23% Similarity=0.323 Sum_probs=202.7
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||.||+++++ +..||+|++....... ...+.+.+|++++++++||||+++++++.. .
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~------~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~ 72 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP------VIKKIALREIRMLKQLKHPNLVNLIEVFRR--K 72 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCc------cccHHHHHHHHHHHhCCCCCEeeeeeEEee--C
Confidence 36899999999999999999984 7789999987542111 112457789999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||++++.|..++... ..+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+|||++
T Consensus 73 ~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~----~~~~~~l~dfg~~ 147 (286)
T cd07847 73 RKLHLVFEYCDHTVLNELEKNP-RGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT----KQGQIKLCDFGFA 147 (286)
T ss_pred CEEEEEEeccCccHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc----CCCcEEECccccc
Confidence 6889999999998888776543 3489999999999999999999999999999999999998 6778999999999
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC---------
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT--------- 1102 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~--------- 1102 (1157)
....... ......++..|+|||++.+. ..++.++|+||||+++|+|++|+.||.+....+....+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07847 148 RILTGPGDDYTDYVATRWYRAPELLVGD-TQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 226 (286)
T ss_pred eecCCCcccccCcccccccCCHHHHhCC-CCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhh
Confidence 7654432 23345688999999998753 346889999999999999999999998776544333321100
Q ss_pred ------------CCCC--------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 ------------LRPQ--------IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 ------------lrpe--------ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+.. ....++..+.+||.+||+.+|++||++.+++.+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~ 285 (286)
T cd07847 227 IFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPY 285 (286)
T ss_pred hcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCC
Confidence 0000 01245788999999999999999999999998754
No 221
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=8.2e-37 Score=313.29 Aligned_cols=249 Identities=28% Similarity=0.504 Sum_probs=208.7
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++.+.||+|+||.||++++. +..+|+|.+.... ..+.+.+|++++++++||||+++++.+.. .
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~----------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~ 70 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE----------DLQEIIKEISILKQCDSPYIVKYYGSYFK--N 70 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH----------HHHHHHHHHHHHHhCCCCcEeeeeeeeec--C
Confidence 57899999999999999999985 5779999886531 14678899999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+|++|||+.+++|.+++......+++..++.++.|++.||.|||+.+|+||||+|+||+++ ..+.+||+|||++
T Consensus 71 ~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~----~~~~~~l~dfg~~ 146 (256)
T cd06612 71 TDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN----EEGQAKLADFGVS 146 (256)
T ss_pred CcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC----CCCcEEEcccccc
Confidence 689999999999999999976667789999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC-CCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT-LRPQIPER 1110 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~-lrpeip~~ 1110 (1157)
....... ......++..|+|||++.+. .++.++||||||+++|+|++|+.||...........+.... .....+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (256)
T cd06612 147 GQLTDTMAKRNTVIGTPFWMAPEVIQEI--GYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEK 224 (256)
T ss_pred hhcccCccccccccCCccccCHHHHhcC--CCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhh
Confidence 7654332 22334588999999998754 57899999999999999999999998766544433332211 12223445
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
++.++.+||.+||+.+|.+|||+.+++++.+
T Consensus 225 ~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~ 255 (256)
T cd06612 225 WSPEFNDFVKKCLVKDPEERPSAIQLLQHPF 255 (256)
T ss_pred cCHHHHHHHHHHHhcChhhCcCHHHHhcCCC
Confidence 7789999999999999999999999998654
No 222
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.9e-36 Score=313.12 Aligned_cols=249 Identities=31% Similarity=0.553 Sum_probs=200.1
Q ss_pred EEecccCcEEEEEEEEC-----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcE
Q 001103 881 QELGSGTFGTVYRGKWR-----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k-----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~L 955 (1157)
+.||+|+||.||+|.+. ...+|+|.+.... .......+.+|+.+++.++||||+++++++... ++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-~~~~ 72 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT-------DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS-EGSP 72 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC-------CHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-CCCc
Confidence 36899999999999863 2358999875321 112246788899999999999999999976543 4567
Q ss_pred EEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccc
Q 001103 956 ATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~ 1035 (1157)
+++|||+.+++|.+++.+....+++..++.++.|++.||.|||+++|+||||||+|||++ ..+.+||+|||++...
T Consensus 73 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~----~~~~~kl~dfg~~~~~ 148 (262)
T cd05058 73 LVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD----ESFTVKVADFGLARDI 148 (262)
T ss_pred EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc----CCCcEEECCccccccc
Confidence 899999999999999976555577788889999999999999999999999999999998 6778999999998753
Q ss_pred cCCc-----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1036 CNTL-----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1036 ~~~~-----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
.... ......++..|+|||.+.+. .++.++|||||||++|||++ |.+||...........+.. ...+..+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 225 (262)
T cd05058 149 YDKEYYSVHNHTGAKLPVKWMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQ-GRRLLQPE 225 (262)
T ss_pred cCCcceeecccccCcCCccccChhHhccC--ccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc-CCCCCCCC
Confidence 3211 11233467789999998753 57899999999999999999 5677877666555554433 33344566
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.+++.+.+++.+||+.+|++||++.++++.|..+.
T Consensus 226 ~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 226 YCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 67899999999999999999999999999998765
No 223
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=9.3e-38 Score=371.55 Aligned_cols=266 Identities=35% Similarity=0.592 Sum_probs=230.6
Q ss_pred cccccccCCCeeEEEEecccCcEEEEEEEECC-------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCc
Q 001103 867 YGLQIIKDSDLEELQELGSGTFGTVYRGKWRG-------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPN 939 (1157)
Q Consensus 867 y~i~~I~~sdYeILrkLGsGsFGtVYlAr~kG-------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPN 939 (1157)
....++...+.+..++||+|+||+||+|+..+ +-||||.++... .....++|.||++++..|+|||
T Consensus 478 ~~~~~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a-------~~~~~~dF~REaeLla~l~H~n 550 (774)
T KOG1026|consen 478 LKVLEIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKA-------ENQARQDFRREAELLAELQHPN 550 (774)
T ss_pred cceeEechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccc-------cHHHHHHHHHHHHHHHhccCCC
Confidence 34566778889999999999999999998742 239999988652 2335689999999999999999
Q ss_pred eeEEeeeeecCCCCcEEEEEEeecCCcchhhhccc---------ccc----ccHHHHHHHHHHHHHHHHHHHHCCceecc
Q 001103 940 VVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARK---------DRI----LDRRKKLMLMMDAAFGMEYLHMKNIVHFD 1006 (1157)
Q Consensus 940 IVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~---------gr~----L~e~qVlkIa~QLa~ALeYLHSkGIIHRD 1006 (1157)
||+|+|++.+ ++.+|+|+|||..|||.++|... +.. ++..+.+.|+.||+.|+.||-++.+||||
T Consensus 551 IVrLlGVC~~--~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRD 628 (774)
T KOG1026|consen 551 IVRLLGVCRE--GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRD 628 (774)
T ss_pred eEEEEEEEcc--CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccc
Confidence 9999999988 67899999999999999998632 222 78899999999999999999999999999
Q ss_pred CCccceeeccCCCCCCeEEEEecCCcccccCCcccC---CCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-C
Q 001103 1007 LKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLVSG---GVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-G 1082 (1157)
Q Consensus 1007 LKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~st---s~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-G 1082 (1157)
|-..|+||+ ++..|||+|||+++......... ...-..+|||||.|+ ..+++.++||||+||+|||+++ |
T Consensus 629 LATRNCLVg----e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIl--y~kFTteSDVWs~GVvLWEIFsyG 702 (774)
T KOG1026|consen 629 LATRNCLVG----ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESIL--YGKFTTESDVWSFGVVLWEIFSYG 702 (774)
T ss_pred hhhhhceec----cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhh--cCcccchhhhhhhhhhhhhhhccc
Confidence 999999998 88999999999998544332221 122456899999998 4579999999999999999999 9
Q ss_pred CCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHh
Q 001103 1083 EEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQ 1148 (1157)
Q Consensus 1083 k~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLe 1148 (1157)
+.||.+....++++.+..+.+ .+.|+.+|.++++||..||+.+|.+||++++|-..|+.+..+-.
T Consensus 703 ~QPy~glSn~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~ 767 (774)
T KOG1026|consen 703 KQPYYGLSNQEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASP 767 (774)
T ss_pred cCcccccchHHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCc
Confidence 999999999999999988877 78899999999999999999999999999999999998876543
No 224
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=1.7e-36 Score=317.47 Aligned_cols=247 Identities=34% Similarity=0.591 Sum_probs=199.6
Q ss_pred EecccCcEEEEEEEECC--c--eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCCCcEE
Q 001103 882 ELGSGTFGTVYRGKWRG--T--DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~kG--t--~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~~~~Ly 956 (1157)
.||+|+||.||++++++ . .+|+|.++... .......+.+|+++++++ +||||+++++++.. .+..+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~--~~~~~ 72 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-------SKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--RGYLY 72 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-------CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec--CCCce
Confidence 58999999999998843 2 36888776421 112245678899999999 89999999999877 56789
Q ss_pred EEEEeecCCcchhhhcccc---------------ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCC
Q 001103 957 TVTEYMVNGSLRHVLARKD---------------RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQR 1021 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~g---------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~ 1021 (1157)
++|||+++++|.+++.... ..+++..++.++.|++.||+|||++|++||||||+|||++ .+
T Consensus 73 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~----~~ 148 (270)
T cd05047 73 LAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG----EN 148 (270)
T ss_pred EEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc----CC
Confidence 9999999999999886432 2478899999999999999999999999999999999998 77
Q ss_pred CeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhh
Q 001103 1022 PICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILS 1100 (1157)
Q Consensus 1022 g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~ 1100 (1157)
+.+||+|||++..............+..|+|||++.+. .++.++|+|||||++|+|++ |..||...........+..
T Consensus 149 ~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~ 226 (270)
T cd05047 149 YVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ 226 (270)
T ss_pred CeEEECCCCCccccchhhhccCCCCccccCChHHHccC--CCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC
Confidence 89999999998632222111122346679999998743 57899999999999999997 9999988776666555543
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1101 NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1101 ~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
......+..++.++.+|+.+||..+|.+|||+.+++..|..+.
T Consensus 227 -~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 -GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 2344456668899999999999999999999999999998764
No 225
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=1.2e-36 Score=317.88 Aligned_cols=251 Identities=28% Similarity=0.448 Sum_probs=210.4
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||.|+||.||++++ .+..||+|++..... ......+.+|+++++.++||||+++++.+.+ .
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 71 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA-------EDEIEDIQQEIQFLSQCRSPYITKYYGSFLK--G 71 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc-------chHHHHHHHHHHHHHHcCCCCeeeeeEEEEE--C
Confidence 3688899999999999999988 467799999875421 1123567889999999999999999999887 4
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+++|+||+.+++|.+++... .+++..++.++.|++.||.|||+++++||||+|+||+++ .++.++|+|||++
T Consensus 72 ~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~----~~~~~~l~d~g~~ 145 (274)
T cd06609 72 SKLWIIMEYCGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS----EEGDVKLADFGVS 145 (274)
T ss_pred CeEEEEEEeeCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC----CCCCEEEcccccc
Confidence 6899999999999999998754 689999999999999999999999999999999999998 6788999999999
Q ss_pred ccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCC-
Q 001103 1033 RIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPER- 1110 (1157)
Q Consensus 1033 kl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~- 1110 (1157)
+..... .......+++.|+|||.+.+. .++.++|+||||+++|+|++|+.||...........+... ..+.++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~-~~~~~~~~~ 222 (274)
T cd06609 146 GQLTSTMSKRNTFVGTPFWMAPEVIKQS--GYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKN-NPPSLEGNK 222 (274)
T ss_pred eeecccccccccccCCccccChhhhccC--CCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhc-CCCCCcccc
Confidence 765443 223345789999999999864 4789999999999999999999999877655554444333 33444444
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
+++++.++|.+||..+|.+||++++++++.+..
T Consensus 223 ~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~ 255 (274)
T cd06609 223 FSKPFKDFVSLCLNKDPKERPSAKELLKHKFIK 255 (274)
T ss_pred cCHHHHHHHHHHhhCChhhCcCHHHHhhChhhc
Confidence 889999999999999999999999999987653
No 226
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=357.43 Aligned_cols=267 Identities=37% Similarity=0.625 Sum_probs=232.2
Q ss_pred cccccCCCeeEEEEecccCcEEEEEEEEC---C--ce-EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeE
Q 001103 869 LQIIKDSDLEELQELGSGTFGTVYRGKWR---G--TD-IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVA 942 (1157)
Q Consensus 869 i~~I~~sdYeILrkLGsGsFGtVYlAr~k---G--t~-VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVk 942 (1157)
-|++..++..+.++||+|+||.||+|+++ + .. ||||..+... ...+..+.++.+|+++|++++|||||+
T Consensus 151 ~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~-----~~~~~~~~e~m~EArvMr~l~H~NVVr 225 (474)
T KOG0194|consen 151 KWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSS-----ELTKEQIKEFMKEARVMRQLNHPNVVR 225 (474)
T ss_pred ccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccc-----cccHHHHHHHHHHHHHHHhCCCCCEEE
Confidence 35666778888899999999999999883 1 13 8999877522 122445788999999999999999999
Q ss_pred EeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCC
Q 001103 943 FYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRP 1022 (1157)
Q Consensus 943 Lygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g 1022 (1157)
+||+... ...+++|||+|.||+|.++|++.+..++..+.+.++.+++.||+|||++++|||||-.+|+|++ ...
T Consensus 226 ~yGVa~~--~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~----~~~ 299 (474)
T KOG0194|consen 226 FYGVAVL--EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS----KKG 299 (474)
T ss_pred EEEEEcC--CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec----CCC
Confidence 9999888 5689999999999999999998877799999999999999999999999999999999999998 666
Q ss_pred eEEEEecCCcccccCCcccCCC-CCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhh
Q 001103 1023 ICKVGDFGLSRIKCNTLVSGGV-RGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILS 1100 (1157)
Q Consensus 1023 ~VKLiDFGLAkl~~~~~~sts~-~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~ 1100 (1157)
.+||+|||+++........... .-...|+|||.+... .|+.++|||||||++||+++ |..||.+....++...+..
T Consensus 300 ~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~--~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~ 377 (474)
T KOG0194|consen 300 VVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTG--IFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVK 377 (474)
T ss_pred eEEeCccccccCCcceeeccccccCcceecChhhhccC--ccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHh
Confidence 7999999999865433332212 256789999999843 78999999999999999999 8999999999999999988
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHh
Q 001103 1101 NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQ 1148 (1157)
Q Consensus 1101 ~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLe 1148 (1157)
..++...+...+.++..++.+|+..+|++||++.++.+.+..+.....
T Consensus 378 ~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 378 NGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred cCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 889999999999999999999999999999999999999998887655
No 227
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=1e-36 Score=318.49 Aligned_cols=257 Identities=28% Similarity=0.458 Sum_probs=202.2
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHH-HHhCCCCceeEEeeeeecCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHI-ISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkI-LK~L~HPNIVkLygvf~de~ 951 (1157)
.+|++++.||+|+||.||+++++ |..||+|+++..... .. ...+..|+.+ ++.++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~----~~---~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-- 71 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS----QE---QKRLLMDLDISMRSVDCPYTVTFYGALFR-- 71 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc----HH---HHHHHHHHHHHHHHcCCCCeeeeeEEEec--
Confidence 37899999999999999999984 778999998764211 11 1334455554 667799999999999977
Q ss_pred CCcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 GGTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMK-NIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSk-GIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
.+..|++|||++ ++|.+++.. ....+++..++.++.|++.||.|||++ +++||||||+|||++ .++.+||+
T Consensus 72 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~----~~~~~kl~ 146 (283)
T cd06617 72 EGDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN----RNGQVKLC 146 (283)
T ss_pred CCcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC----CCCCEEEe
Confidence 567999999997 577776643 234689999999999999999999998 999999999999998 67799999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hhHHHHHhhhcCCC
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGS--NNRVSEKVDVYSFGIAMWEIITGEEPYANMH-CGAIIGGILSNTLR 1104 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~--~~~yS~KSDIWSLGVILYELLTGk~PF~g~~-~eeil~~Il~~~lr 1104 (1157)
|||++.............|+..|+|||.+.+. ...++.++|+|||||++|+|++|+.||.... ..+.+..+.....
T Consensus 147 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 225 (283)
T cd06617 147 DFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS- 225 (283)
T ss_pred ecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC-
Confidence 99998765443333345689999999988642 1346889999999999999999999997533 2233333333322
Q ss_pred CCC-CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1105 PQI-PERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1105 pei-p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
+.+ ...+++++.+||.+||..+|.+||++.+++++.+.....
T Consensus 226 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 268 (283)
T cd06617 226 PQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHL 268 (283)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhcc
Confidence 223 345789999999999999999999999999988776643
No 228
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.6e-36 Score=316.23 Aligned_cols=251 Identities=23% Similarity=0.292 Sum_probs=200.2
Q ss_pred eeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCCC
Q 001103 877 LEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~~~ 953 (1157)
|++++.||+|+||.||+++. .+..||+|++++... . .. .....+|+.+++++. ||||+++++++.+...+
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~-~-~~-----~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~ 73 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFK-S-LE-----QVNNLREIQALRRLSPHPNILRLIEVLFDRKTG 73 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccC-C-ch-----hhhHHHHHHHHhhcCCCCCccceEEEEecCCCC
Confidence 67889999999999999987 467799998875421 1 11 123457888899885 99999999999886557
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.+++||||+.+ +|.+.+......+++..++.++.|++.||+|||+++|+||||||+||+++ . +.+||+|||++.
T Consensus 74 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~----~-~~~kl~dfg~~~ 147 (282)
T cd07831 74 RLALVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK----D-DILKLADFGSCR 147 (282)
T ss_pred cEEEEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc----C-CCeEEEeccccc
Confidence 89999999975 77777766555689999999999999999999999999999999999998 5 899999999998
Q ss_pred cccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC-----------
Q 001103 1034 IKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT----------- 1102 (1157)
Q Consensus 1034 l~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~----------- 1102 (1157)
............++..|+|||.+.+. ..++.++|||||||++|||++|+.||...+..+.+..+....
T Consensus 148 ~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 148 GIYSKPPYTEYISTRWYRAPECLLTD-GYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred ccccCCCcCCCCCCcccCChhHhhcC-CCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhh
Confidence 65444433445689999999987543 346889999999999999999999998776554443332110
Q ss_pred -----CCCCC-----------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 -----LRPQI-----------PERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 -----lrpei-----------p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
....+ ...++..+++||.+||..+|.+||++++++++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~ 281 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCC
Confidence 00011 1246789999999999999999999999998754
No 229
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.8e-36 Score=313.96 Aligned_cols=247 Identities=25% Similarity=0.403 Sum_probs=209.2
Q ss_pred ecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEE
Q 001103 883 LGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTE 960 (1157)
Q Consensus 883 LGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVME 960 (1157)
||.|+||.||+++++ +..||+|++.+..... ....+.+.+|+++++.++||||+++++.+.+ ...++++||
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~lv~e 73 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVE-----TGQQEHIFSEKEILEECNHPFIVKLYRTFKD--KKYIYMLME 73 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchh-----hhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc--CCccEEEEe
Confidence 799999999999996 7789999997653211 2234678899999999999999999999877 568999999
Q ss_pred eecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCcc
Q 001103 961 YMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLV 1040 (1157)
Q Consensus 961 YmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~ 1040 (1157)
|+++++|.+++.+.. .+++..+..++.|++.||+|||+++++|+||||+||+++ .++.++|+|||++........
T Consensus 74 ~~~~~~L~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~----~~~~~~l~df~~~~~~~~~~~ 148 (262)
T cd05572 74 YCLGGELWTILRDRG-LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD----SNGYVKLVDFGFAKKLKSGQK 148 (262)
T ss_pred cCCCCcHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc----CCCCEEEeeCCcccccCcccc
Confidence 999999999997543 488999999999999999999999999999999999998 677899999999986554433
Q ss_pred cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC--hhHHHHHhhhcCCCCCCCCCCcHHHHHH
Q 001103 1041 SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH--CGAIIGGILSNTLRPQIPERCDPEWRKL 1118 (1157)
Q Consensus 1041 sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~--~eeil~~Il~~~lrpeip~~iSpeLrdL 1118 (1157)
.....|++.|++||.+.+. .++.++|+||||+++|+|++|..||.... .......+........++...++++++|
T Consensus 149 ~~~~~~~~~~~~PE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (262)
T cd05572 149 TWTFCGTPEYVAPEIILNK--GYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDL 226 (262)
T ss_pred cccccCCcCccChhHhcCC--CCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHH
Confidence 3345789999999998743 57889999999999999999999998776 5555566654445556677779999999
Q ss_pred HHHHhccCCCCCCC-----HHHHHHHHHHH
Q 001103 1119 MEECWSFNPAARPS-----FTEITNRLRVM 1143 (1157)
Q Consensus 1119 IkrCLqkDPskRPS-----aeELLe~Lr~L 1143 (1157)
|.+||+.+|.+||+ +++++++.|.-
T Consensus 227 i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 256 (262)
T cd05572 227 IKQLLRRNPEERLGNLKGGIKDIKKHKWFN 256 (262)
T ss_pred HHHHccCChhhCcCCcccCHHHHhcChhhh
Confidence 99999999999999 99999988754
No 230
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.7e-36 Score=309.75 Aligned_cols=248 Identities=39% Similarity=0.682 Sum_probs=206.8
Q ss_pred eeEEEEecccCcEEEEEEEECC------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 877 LEELQELGSGTFGTVYRGKWRG------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~kG------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
+++.+.||.|+||.||++++.. ..||+|+++.... ......+.+|+.+++.++|+||+++++++.+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~- 72 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD-------EQQIEEFLREARIMRKLDHPNIVKLLGVCTE- 72 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC-------hHHHHHHHHHHHHHHhcCCCchheEEEEEcC-
Confidence 3567889999999999999854 6699999865421 1134678899999999999999999999887
Q ss_pred CCCcEEEEEEeecCCcchhhhcccccc-ccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRI-LDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~-L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
.+..+++|||+++++|.+++...... +++..++.++.|++.||.|||+++++||||||+||+++ ..+.++|+||
T Consensus 73 -~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~----~~~~~~l~df 147 (258)
T smart00219 73 -EEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG----ENLVVKISDF 147 (258)
T ss_pred -CCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc----cCCeEEEccc
Confidence 46899999999999999999765444 89999999999999999999999999999999999998 6779999999
Q ss_pred CCcccccCCcccC--CCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCC
Q 001103 1030 GLSRIKCNTLVSG--GVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1030 GLAkl~~~~~~st--s~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpe 1106 (1157)
|++.......... ...+++.|+|||.+.+ ..++.++|+||||+++|+|++ |.+||...........+.... ...
T Consensus 148 g~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~--~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~-~~~ 224 (258)
T smart00219 148 GLSRDLYDDDYYKKKGGKLPIRWMAPESLKD--GKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY-RLP 224 (258)
T ss_pred CCceecccccccccccCCCcccccChHHhcc--CCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC-CCC
Confidence 9997654332211 1237789999999864 357899999999999999998 899998877766666655443 344
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
.+...+.++.+++.+||..||.+|||+.++++.|
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 225 KPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred CCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 5666899999999999999999999999999864
No 231
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=1.8e-36 Score=319.32 Aligned_cols=253 Identities=32% Similarity=0.573 Sum_probs=207.1
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC-------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEee
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR-------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYG 945 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k-------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLyg 945 (1157)
...+|++++.||+|+||.||++++. +..||+|++.... .......+.+|+.++++++||||+++++
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~ei~~l~~l~h~~iv~~~~ 75 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA-------SADMQADFQREAALMAEFDHPNIVKLLG 75 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc-------CHHHHHHHHHHHHHHHhcCCCchheEEE
Confidence 3468999999999999999999874 4569999886531 1123466889999999999999999999
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhcccc---------------------ccccHHHHHHHHHHHHHHHHHHHHCCcee
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------------RILDRRKKLMLMMDAAFGMEYLHMKNIVH 1004 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------------r~L~e~qVlkIa~QLa~ALeYLHSkGIIH 1004 (1157)
++.. ....+++|||+.+++|.+++.... ..+++..++.++.|++.||.|||+++++|
T Consensus 76 ~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H 153 (288)
T cd05050 76 VCAV--GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVH 153 (288)
T ss_pred EEcC--CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 9877 457899999999999998886321 24678889999999999999999999999
Q ss_pred ccCCccceeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc
Q 001103 1005 FDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT 1081 (1157)
Q Consensus 1005 RDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT 1081 (1157)
|||||+|||++ .++.+||+|||++....... .......+..|+|||.+.+. .++.++|||||||++|+|++
T Consensus 154 ~dl~p~nil~~----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~ 227 (288)
T cd05050 154 RDLATRNCLVG----ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYN--RYTTESDVWAYGVVLWEIFS 227 (288)
T ss_pred ccccHhheEec----CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcC--CCCchhHHHHHHHHHHHHHh
Confidence 99999999998 67789999999987432221 11223356679999998754 57899999999999999997
Q ss_pred -CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1082 -GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1082 -Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
|..||.+....+....+..... ...+..++.++.+||.+||+.+|.+|||+.++++.|+
T Consensus 228 ~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 228 YGMQPYYGMAHEEVIYYVRDGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCCCCCCCCHHHHHHHHhcCCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 8899988777666666554433 3345678899999999999999999999999999886
No 232
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=6.6e-38 Score=346.88 Aligned_cols=249 Identities=26% Similarity=0.396 Sum_probs=208.2
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|+..+.+|.|+||.||+|... +..||||+..... +.-.+|+++|+.++|||||++..+|......
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~------------r~knrEl~im~~l~HpNIV~L~~~f~~~~~~ 92 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDK------------RYKNRELQIMRKLDHPNIVRLLYFFSSSTES 92 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCC------------CcCcHHHHHHHhcCCcCeeeEEEEEEecCCC
Confidence 5778899999999999999884 5679999876541 1123799999999999999998887654443
Q ss_pred ---cEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 954 ---TMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 954 ---~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
++.+|||||+. +|..+++. .++.++...+.-+.+||.+||.|||+.||+||||||.|||+| ++.+.+|||
T Consensus 93 d~~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD---~~tg~LKic 168 (364)
T KOG0658|consen 93 DEVYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVD---PDTGVLKIC 168 (364)
T ss_pred chhHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEc---CCCCeEEec
Confidence 67799999987 89888874 356688888999999999999999999999999999999998 577999999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC---
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR--- 1104 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr--- 1104 (1157)
|||.|+.........+...|..|+|||.+.|. ..|+.+.||||.||++.||+-|++-|.+......+..|..-.-.
T Consensus 169 DFGSAK~L~~~epniSYicSRyYRaPELifga-~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~ 247 (364)
T KOG0658|consen 169 DFGSAKVLVKGEPNISYICSRYYRAPELIFGA-TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTR 247 (364)
T ss_pred cCCcceeeccCCCceeEEEeccccCHHHHcCc-cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCH
Confidence 99999987766665667789999999999987 46899999999999999999999999998877766665431000
Q ss_pred ---------------C---------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1105 ---------------P---------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1105 ---------------p---------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+ -+....++++.+|+.++|+.+|.+|.++.+++.+..
T Consensus 248 e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h~f 308 (364)
T KOG0658|consen 248 EDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAHPF 308 (364)
T ss_pred HHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcchh
Confidence 0 123457899999999999999999999999998754
No 233
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.6e-36 Score=315.73 Aligned_cols=257 Identities=30% Similarity=0.525 Sum_probs=209.0
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
..+|++++.||+|+||.||++++. +..+|||+++.... ......+.+|+++++.+.||||+++++++
T Consensus 3 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~-------~~~~~~~~~ei~~l~~l~~~~i~~~~~~~ 75 (284)
T cd05038 3 KRHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE-------EQHRSDFEREIEILRTLDHENIVKYKGVC 75 (284)
T ss_pred hhhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc-------hHHHHHHHHHHHHHHhCCCCChheEEeee
Confidence 457888999999999999999874 56799999876421 12346788999999999999999999998
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
........+++|||+++++|.+++......+++..++.++.|++.||+|||++||+||||||+|||++ .++.++|+
T Consensus 76 ~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~----~~~~~~l~ 151 (284)
T cd05038 76 EKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE----SEDLVKIS 151 (284)
T ss_pred ecCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc----CCCCEEEc
Confidence 77556678999999999999999977665689999999999999999999999999999999999998 66899999
Q ss_pred ecCCcccccCCcc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-----------
Q 001103 1028 DFGLSRIKCNTLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG----------- 1092 (1157)
Q Consensus 1028 DFGLAkl~~~~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e----------- 1092 (1157)
|||++........ .....++..|++||.+.+. .++.++|+||||+++|+|++|..||......
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~ 229 (284)
T cd05038 152 DFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTS--KFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQ 229 (284)
T ss_pred ccccccccccCCcceeccCCCCCcccccCcHHHccC--CCCcccchHHHhhhhheeeccCCCcccccchhcccccccccc
Confidence 9999986542211 1122356679999998754 5788999999999999999999998653221
Q ss_pred ---HHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1093 ---AIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1093 ---eil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
..+...+........+..++.++.+|+.+||+.+|.+||++.++++.|..+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 230 MIVTRLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred ccHHHHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 112222333334444566788999999999999999999999999999764
No 234
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.9e-36 Score=312.28 Aligned_cols=245 Identities=34% Similarity=0.587 Sum_probs=202.0
Q ss_pred EEecccCcEEEEEEEECC-----ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcE
Q 001103 881 QELGSGTFGTVYRGKWRG-----TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~kG-----t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~L 955 (1157)
++||+|+||.||+|++.. ..+|+|.+...... ...+.+.+|+++++.+.||||+++++++.. ...
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---~~~ 70 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-------AGKKEFLREASVMAQLDHPCIVRLIGVCKG---EPL 70 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-------HHHHHHHHHHHHHHhcCCCCeeeEEEEEcC---Cce
Confidence 469999999999998732 46999988764221 234678899999999999999999998754 357
Q ss_pred EEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccc
Q 001103 956 ATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~ 1035 (1157)
++||||+.+++|.+++.+.. .+++..++.++.|++.||+|||.++++||||||+|||++ .++.+||+|||++...
T Consensus 71 ~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~----~~~~~kl~df~~~~~~ 145 (257)
T cd05060 71 MLVMELAPLGPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV----NRHQAKISDFGMSRAL 145 (257)
T ss_pred EEEEEeCCCCcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc----CCCcEEecccccccee
Confidence 99999999999999997654 588999999999999999999999999999999999998 6778999999998754
Q ss_pred cCCcc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCC
Q 001103 1036 CNTLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPER 1110 (1157)
Q Consensus 1036 ~~~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~ 1110 (1157)
..... .....++..|+|||.+.+. .++.++|+|||||++|+|++ |.+||...........+.. ......+..
T Consensus 146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~ 222 (257)
T cd05060 146 GAGSDYYRATTAGRWPLKWYAPECINYG--KFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLES-GERLPRPEE 222 (257)
T ss_pred ecCCcccccccCccccccccCHHHhcCC--CCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc-CCcCCCCCC
Confidence 32221 1111235679999998754 57889999999999999998 9999988777666555543 334456777
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
+++.+++||.+||..+|.+||++.+|++.|+.+
T Consensus 223 ~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 223 CPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 899999999999999999999999999999864
No 235
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9e-38 Score=335.50 Aligned_cols=270 Identities=23% Similarity=0.319 Sum_probs=236.8
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~ 951 (1157)
..|+..+.||.|..++|-++.. .|.++|+|++.........+....+.+.-.+|+.||+++ .||+|+++.++++.
T Consensus 17 ~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes-- 94 (411)
T KOG0599|consen 17 AKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES-- 94 (411)
T ss_pred hhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC--
Confidence 3566778899999999998877 477899999987665555555677788889999999999 59999999999988
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
...+++|+|.|+.|.|.++|...- .++++..++|++|+..|++|||.++||||||||+|||++ ++.++||+|||+
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V-tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILld----dn~~i~isDFGF 169 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV-TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLD----DNMNIKISDFGF 169 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe-eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeec----cccceEEeccce
Confidence 668999999999999999997654 389999999999999999999999999999999999999 888999999999
Q ss_pred cccccCCcccCCCCCCCcccCcccccCC----CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCC
Q 001103 1032 SRIKCNTLVSGGVRGTLPWMAPELLNGS----NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1032 Akl~~~~~~sts~~GTp~YmAPEVL~G~----~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpei 1107 (1157)
|+...........||||+|+|||.+... ...|+..+|+|++|||||.|+.|.+||-.......+..|+.+.+....
T Consensus 170 a~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~s 249 (411)
T KOG0599|consen 170 ACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRS 249 (411)
T ss_pred eeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCC
Confidence 9998888888889999999999998642 235889999999999999999999999988888888888888776554
Q ss_pred C--CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHhhcc
Q 001103 1108 P--ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQTKR 1151 (1157)
Q Consensus 1108 p--~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLesks 1151 (1157)
| .+++...++||.+||+.||.+|.|+++.|.|.++...+.+..+
T Consensus 250 peWadis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r 295 (411)
T KOG0599|consen 250 PEWADISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQAR 295 (411)
T ss_pred cchhhccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhccc
Confidence 4 4578899999999999999999999999999999877665543
No 236
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=2.2e-36 Score=323.02 Aligned_cols=259 Identities=24% Similarity=0.319 Sum_probs=208.1
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++.+.||+|+||.||+|.+ .|..||+|+++....... ....+.+|+.++++++|+||+++++++....
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 79 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDG------IPISSLREITLLLNLRHPNIVELKEVVVGKH 79 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCC------CcchhhHHHHHHHhCCCCCCcceEEEEecCC
Confidence 36899999999999999999988 477899999875422111 1234567999999999999999999998755
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
...+++||||+.+ +|.+++......+++..++.++.|++.||.|||++||+||||||+|||++ ..+.+||+|||+
T Consensus 80 ~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~----~~~~~kL~dfg~ 154 (309)
T cd07845 80 LDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT----DKGCLKIADFGL 154 (309)
T ss_pred CCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC----CCCCEEECccce
Confidence 5678999999975 78888776556689999999999999999999999999999999999998 677999999999
Q ss_pred cccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC------
Q 001103 1032 SRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR------ 1104 (1157)
Q Consensus 1032 Akl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr------ 1104 (1157)
+....... ......+++.|+|||++.+. ..++.++|+|||||++|+|++|++||........+..+......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 233 (309)
T cd07845 155 ARTYGLPAKPMTPKVVTLWYRAPELLLGC-TTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIW 233 (309)
T ss_pred eeecCCccCCCCcccccccccChhhhcCC-CCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence 87644321 22223468889999998753 35788999999999999999999999987766655554331100
Q ss_pred -----------CCC-----------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1105 -----------PQI-----------PERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1105 -----------pei-----------p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
..+ ....++++.+||.+||..||.+|||+++++.+.|.-.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~ 295 (309)
T cd07845 234 PGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKE 295 (309)
T ss_pred hhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 000 0125788999999999999999999999999988753
No 237
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=3.8e-36 Score=313.15 Aligned_cols=255 Identities=26% Similarity=0.402 Sum_probs=212.6
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||.||++++ .+..||+|++...... .........+.+|++++++++||||+++++++.+...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~ 78 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDS---QETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEE 78 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCccc---chhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCC
Confidence 4789999999999999999987 4678999987543111 1112335678899999999999999999999877656
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++++|||+++++|.+++...+ .+++..++.++.|++.||.|||++||+|+||||+||+++ .++.++|+|||++
T Consensus 79 ~~~~~v~e~~~~~~L~~~~~~~~-~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~----~~~~~~l~dfg~~ 153 (264)
T cd06653 79 KKLSIFVEYMPGGSIKDQLKAYG-ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD----SAGNVKLGDFGAS 153 (264)
T ss_pred CEEEEEEEeCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc----CCCCEEECccccc
Confidence 67899999999999999886544 478889999999999999999999999999999999998 6678999999998
Q ss_pred ccccCC----cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC
Q 001103 1033 RIKCNT----LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP 1108 (1157)
Q Consensus 1033 kl~~~~----~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip 1108 (1157)
...... .......|+..|+|||.+.+. .++.++|+|||||++|+|++|+.||........+..+.....++.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~p 231 (264)
T cd06653 154 KRIQTICMSGTGIKSVTGTPYWMSPEVISGE--GYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKPMLP 231 (264)
T ss_pred cccccccccCccccccCCcccccCHhhhcCC--CCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCCCCC
Confidence 754321 112345689999999999754 56889999999999999999999998877666666666555666788
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
..++++++++|.+||+ +|.+||++.++++++
T Consensus 232 ~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~ 262 (264)
T cd06653 232 DGVSDACRDFLKQIFV-EEKRRPTAEFLLRHP 262 (264)
T ss_pred cccCHHHHHHHHHHhc-CcccCccHHHHhcCC
Confidence 8899999999999999 579999999998864
No 238
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.5e-36 Score=313.96 Aligned_cols=258 Identities=23% Similarity=0.420 Sum_probs=211.3
Q ss_pred CeeEEEEecccCcEEEEEEEECC---ceEEEEEEecccccCC--ChhHHHHHHHHHHHHHHHHh-CCCCceeEEeeeeec
Q 001103 876 DLEELQELGSGTFGTVYRGKWRG---TDIAIKRIKKSCFLGR--SSEQEWLIKEFWREAHIISN-LHHPNVVAFYGVVPN 949 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~kG---t~VAVKVIkk~~l~~r--~~e~e~likqflrEIkILK~-L~HPNIVkLygvf~d 949 (1157)
+|++.+.||+|+||.||++++++ ..+|+|.+........ ..........+.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788999999999999999854 6699998875432211 11223345667889998875 799999999999877
Q ss_pred CCCCcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCCCCCCeEE
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
.+..+++|||+++++|.+++.. ....+++..++.++.|++.||.|||+ .+|+|+||||+|||++ .++.+|
T Consensus 81 --~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~----~~~~~~ 154 (269)
T cd08528 81 --NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG----EDDKVT 154 (269)
T ss_pred --CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC----CCCcEE
Confidence 5689999999999999888743 34568899999999999999999996 6899999999999998 677999
Q ss_pred EEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1026 VGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1026 LiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
|+|||++.............|+..|+|||.+.+. .++.++|+||||+++|+|++|+.||...........+......+
T Consensus 155 l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 232 (269)
T cd08528 155 ITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNE--PYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYEP 232 (269)
T ss_pred EecccceeecccccccccccCcccCcChhhhcCC--CCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCCc
Confidence 9999999865544344456789999999999854 57899999999999999999999998777666666665554444
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.....+++++.+||.+||+.||.+||++.++..++.
T Consensus 233 ~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 233 LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 334467899999999999999999999999998874
No 239
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.7e-36 Score=313.79 Aligned_cols=256 Identities=28% Similarity=0.490 Sum_probs=208.1
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|+..+.||+|+||.||+++. .+..||+|++.... ......+...+.+.+|++++++++||||+++++++.+ .+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~--~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~ 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVR--NTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCE--DS 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeeccc--CCchhHHHHHHHHHHHHHHHHHcCCCceehhhceecc--CC
Confidence 477889999999999999987 57789999987542 1112233456788999999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
..++||||+.+++|.+++.+.+ .+++..++.++.|++.||.|||++|++|+||||+||+++. ....+||+|||++.
T Consensus 77 ~~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~---~~~~~~l~dfg~~~ 152 (268)
T cd06630 77 HFNLFVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS---TGQRLRIADFGAAA 152 (268)
T ss_pred eEEEEEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC---CCCEEEEccccccc
Confidence 8899999999999999987544 5889999999999999999999999999999999999971 23469999999987
Q ss_pred cccCCc-----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh---HHHHHhhhcCCCC
Q 001103 1034 IKCNTL-----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG---AIIGGILSNTLRP 1105 (1157)
Q Consensus 1034 l~~~~~-----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e---eil~~Il~~~lrp 1105 (1157)
...... ......|+..|+|||.+.+. .++.++|+||||+++|+|++|+.||...... .....+......+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 230 (268)
T cd06630 153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGE--QYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAP 230 (268)
T ss_pred ccccccccCCccccccccccceeCHhHhccC--CCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCC
Confidence 644321 12234688999999998754 5688999999999999999999999754432 2222333334455
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.++..+++++.++|.+||..+|.+||++.+++++.+
T Consensus 231 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~ 266 (268)
T cd06630 231 SIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPV 266 (268)
T ss_pred CCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcc
Confidence 677778999999999999999999999999998754
No 240
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=3.4e-36 Score=317.79 Aligned_cols=255 Identities=29% Similarity=0.420 Sum_probs=206.2
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNG 950 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de 950 (1157)
..+|++.+.||+|+||.||++.. .++.+|+|++.... .....+.+|+.+++++ +|||++++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---------~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---------DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---------cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 46899999999999999999988 46789999986531 1124567899999999 899999999998653
Q ss_pred C---CCcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 951 P---GGTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 951 ~---~~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
+ .+..++||||+++++|.++++. ....+++..++.++.|++.||+|||+++|+||||||+||+++ ..+.+
T Consensus 92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~----~~~~~ 167 (291)
T cd06639 92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT----TEGGV 167 (291)
T ss_pred cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc----CCCCE
Confidence 2 2468999999999999988753 345689999999999999999999999999999999999998 66789
Q ss_pred EEEecCCcccccCCc-ccCCCCCCCcccCcccccCCC---CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh
Q 001103 1025 KVGDFGLSRIKCNTL-VSGGVRGTLPWMAPELLNGSN---NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS 1100 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~~-~sts~~GTp~YmAPEVL~G~~---~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~ 1100 (1157)
||+|||++....... ......|+..|+|||.+.... ..++.++|||||||++|+|++|+.||........+..+..
T Consensus 168 kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~ 247 (291)
T cd06639 168 KLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPR 247 (291)
T ss_pred EEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhc
Confidence 999999987543322 223456899999999986431 2367899999999999999999999988766555544433
Q ss_pred cCC-CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1101 NTL-RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1101 ~~l-rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
... ....+..++..+.+||.+||+++|.+||++.+++++.+
T Consensus 248 ~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~ 289 (291)
T cd06639 248 NPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPF 289 (291)
T ss_pred CCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcc
Confidence 221 12234567788999999999999999999999999865
No 241
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.6e-36 Score=320.61 Aligned_cols=253 Identities=30% Similarity=0.519 Sum_probs=201.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEECC------------------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWRG------------------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL 935 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~kG------------------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L 935 (1157)
..+|++.+.||+|+||.||++++.+ ..+|+|++.... .......+.+|+++++.+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-------~~~~~~~~~~E~~~l~~l 76 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-------NKNARNDFLKEIKIMSRL 76 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-------CHHHHHHHHHHHHHHHhC
Confidence 4579999999999999999986532 248899876431 122346788999999999
Q ss_pred CCCceeEEeeeeecCCCCcEEEEEEeecCCcchhhhcccc----------ccccHHHHHHHHHHHHHHHHHHHHCCceec
Q 001103 936 HHPNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD----------RILDRRKKLMLMMDAAFGMEYLHMKNIVHF 1005 (1157)
Q Consensus 936 ~HPNIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g----------r~L~e~qVlkIa~QLa~ALeYLHSkGIIHR 1005 (1157)
+||||+++++++.. ....+++|||+.+++|.+++.... ..+++..++.++.|++.||+|||++||+||
T Consensus 77 ~~~~i~~~~~~~~~--~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~ 154 (296)
T cd05095 77 KDPNIIRLLAVCIT--SDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHR 154 (296)
T ss_pred CCCCcceEEEEEec--CCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 99999999999877 557899999999999998886532 236778899999999999999999999999
Q ss_pred cCCccceeeccCCCCCCeEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-
Q 001103 1006 DLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT- 1081 (1157)
Q Consensus 1006 DLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT- 1081 (1157)
||||+|||++ .++.++|+|||++....... ......++..|++||...+. .++.++|+|||||++|||++
T Consensus 155 dlkp~Nili~----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~DiwSlG~~l~el~~~ 228 (296)
T cd05095 155 DLATRNCLVG----KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLG--KFTTASDVWAFGVTLWEILTL 228 (296)
T ss_pred cCChheEEEc----CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcC--CccchhhhhHHHHHHHHHHHh
Confidence 9999999998 67789999999987543221 11223356789999987653 57899999999999999998
Q ss_pred -CCCCCCCCChhHHHHHhhh------cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1082 -GEEPYANMHCGAIIGGILS------NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1082 -Gk~PF~g~~~eeil~~Il~------~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
|..||......+.+..... .......+..+++.+++||.+||+.||.+||++.+|++.|+
T Consensus 229 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 229 CKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 7899987665554433211 11112334567899999999999999999999999999885
No 242
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-38 Score=343.53 Aligned_cols=257 Identities=27% Similarity=0.428 Sum_probs=223.3
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
.+.-++|+.++.||+|.||+|.+++-+ ++.||||++++.....+.+ +..-+-|-++|+..+||.+..+--.|+
T Consensus 164 kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdE-----VAHTlTE~RVL~~~~HPFLt~LKYsFQ 238 (516)
T KOG0690|consen 164 KVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDE-----VAHTLTENRVLQNCRHPFLTSLKYSFQ 238 (516)
T ss_pred eeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHH-----hhhhhhHHHHHHhccCcHHHHhhhhhc
Confidence 345578999999999999999999874 6779999999986655432 455667999999999999998877777
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
. +.++|+||||..||.|...|.+. +.+++...+.+..+|+.||.|||+++||+||||.+|+|++ .++++||+|
T Consensus 239 t--~drlCFVMeyanGGeLf~HLsre-r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLD----kDGHIKitD 311 (516)
T KOG0690|consen 239 T--QDRLCFVMEYANGGELFFHLSRE-RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLD----KDGHIKITD 311 (516)
T ss_pred c--CceEEEEEEEccCceEeeehhhh-hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheec----cCCceEeee
Confidence 7 67899999999999999888764 4588999999999999999999999999999999999999 889999999
Q ss_pred cCCcccccC-CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCC
Q 001103 1029 FGLSRIKCN-TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1029 FGLAkl~~~-~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpei 1107 (1157)
||+++.... ...+.++||||.|+|||++. +..|+..+|||.+||+||||++|++||.+.+.+.++..|+...+ .+
T Consensus 312 FGLCKE~I~~g~t~kTFCGTPEYLAPEVle--DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~--kF 387 (516)
T KOG0690|consen 312 FGLCKEEIKYGDTTKTFCGTPEYLAPEVLE--DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDL--KF 387 (516)
T ss_pred cccchhcccccceeccccCChhhcCchhhc--cccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhc--cC
Confidence 999986443 44566799999999999998 45789999999999999999999999999999998888887665 47
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHHHHHH
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARP-----SFTEITNRLRVM 1143 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRP-----SaeELLe~Lr~L 1143 (1157)
|..++++.+.|+..+|.+||.+|- .+++|.++-.+.
T Consensus 388 Pr~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~ 428 (516)
T KOG0690|consen 388 PRTLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFA 428 (516)
T ss_pred CccCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhc
Confidence 889999999999999999999993 577777765443
No 243
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=2.9e-36 Score=314.23 Aligned_cols=246 Identities=25% Similarity=0.499 Sum_probs=192.9
Q ss_pred EEecccCcEEEEEEEEC-C---ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEE
Q 001103 881 QELGSGTFGTVYRGKWR-G---TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k-G---t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~Ly 956 (1157)
++||+|+||+||+|+.. + ..+|+|.+.... .......+.+|+.+++.++||||+++++.+.. ....+
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~--~~~~~ 71 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASA-------TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE--SIPYL 71 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCccC-------ChHHHHHHHHHHHHHHhCCCCCcceEEEEECC--CCceE
Confidence 36999999999999763 2 346777654321 12224567889999999999999999999877 56799
Q ss_pred EEEEeecCCcchhhhcccc----ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 957 TVTEYMVNGSLRHVLARKD----RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~g----r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+||||+.+|+|.+++.... ...++..++.++.||+.||+|||+++|+||||||+|||++ .++.+||+|||++
T Consensus 72 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~----~~~~~kl~dfg~~ 147 (269)
T cd05042 72 LVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT----ADLSVKIGDYGLA 147 (269)
T ss_pred EEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec----CCCcEEEeccccc
Confidence 9999999999999986532 2346778889999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc---ccCCCCCCCcccCcccccCC-----CCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcC-
Q 001103 1033 RIKCNTL---VSGGVRGTLPWMAPELLNGS-----NNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNT- 1102 (1157)
Q Consensus 1033 kl~~~~~---~sts~~GTp~YmAPEVL~G~-----~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~- 1102 (1157)
....... ......++..|+|||++... ...++.++|||||||++|||++ |..||........+.......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~ 227 (269)
T cd05042 148 LEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQD 227 (269)
T ss_pred cccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccC
Confidence 6432211 12233467789999987531 2346889999999999999999 889998877665555443322
Q ss_pred ---CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1103 ---LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1103 ---lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
..+.++..+++.+.+++..|+ .||.+|||+++|++.|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 228 IKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred ccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 223455678899999999999 5999999999999886
No 244
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=3.6e-36 Score=309.16 Aligned_cols=245 Identities=37% Similarity=0.651 Sum_probs=203.2
Q ss_pred EEecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEE
Q 001103 881 QELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVT 959 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVM 959 (1157)
++||+|+||.||++.+. ++.||+|.++.... ......+.+|++++++++||||+++++++.. ....++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~-------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~~v~ 71 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP-------PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQ--KQPIYIVM 71 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCC-------HHHHHHHHHHHHHHHhCCCCCeEEEEEEEec--CCCeEEEE
Confidence 36999999999999885 78899998875421 1234678899999999999999999999877 56889999
Q ss_pred EeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCc
Q 001103 960 EYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL 1039 (1157)
Q Consensus 960 EYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~ 1039 (1157)
||+.+++|.+++.+....+++..++.++.+++.+|.|||+++++||||||+|||++ .++.+||+|||++.......
T Consensus 72 e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~----~~~~~~l~d~g~~~~~~~~~ 147 (251)
T cd05041 72 ELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG----ENNVLKISDFGMSREEEGGI 147 (251)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc----CCCcEEEeeccccccccCCc
Confidence 99999999999876555688999999999999999999999999999999999998 67789999999987543211
Q ss_pred cc---CCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHH
Q 001103 1040 VS---GGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEW 1115 (1157)
Q Consensus 1040 ~s---ts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeL 1115 (1157)
.. ....++..|+|||.+.+. .++.++|+|||||++|+|++ |..||...........+.. ......+...+.++
T Consensus 148 ~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 224 (251)
T cd05041 148 YTVSDGLKQIPIKWTAPEALNYG--RYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIES-GYRMPAPQLCPEEI 224 (251)
T ss_pred ceeccccCcceeccCChHhhccC--CCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhc-CCCCCCCccCCHHH
Confidence 11 112345679999998754 57899999999999999998 8999988776555554433 33445567788999
Q ss_pred HHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1116 RKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1116 rdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+||.+||..+|.+||++.++++.|.
T Consensus 225 ~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 225 YRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHhccChhhCcCHHHHHHHhh
Confidence 99999999999999999999999875
No 245
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5.5e-36 Score=303.31 Aligned_cols=253 Identities=31% Similarity=0.494 Sum_probs=212.9
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|.+.+.||+|++|.||+|... +..+++|++...... ....+.+.+|+.++++++||||+++++.+......
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS------EEELEALEREIRILSSLQHPNIVRYYGSERDEEKN 74 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc------hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCC
Confidence 4778899999999999999985 778999998765221 23357788999999999999999999998874337
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
..+++|||+.+++|.+++.+.. .+++..++.++.|++.||.|||+++++|+||+|+||+++ .++.++|+|||.+.
T Consensus 75 ~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~----~~~~~~l~d~~~~~ 149 (260)
T cd06606 75 TLNIFLEYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD----SDGVVKLADFGCAK 149 (260)
T ss_pred eEEEEEEecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc----CCCCEEEcccccEE
Confidence 8999999999999999987654 689999999999999999999999999999999999998 67899999999988
Q ss_pred cccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hhHHHHHhhhcCCCCCCCC
Q 001103 1034 IKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH-CGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1034 l~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~-~eeil~~Il~~~lrpeip~ 1109 (1157)
....... .....++..|+|||.+.+. .++.++|+||||+++|+|++|..||.... .......+......+.++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (260)
T cd06606 150 RLGDIETGEGTGSVRGTPYWMAPEVIRGE--EYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPE 227 (260)
T ss_pred ecccccccccccCCCCCccccCHhhhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCc
Confidence 6554432 3446689999999998754 47889999999999999999999998765 2233333333344556777
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+++.+++||.+||+.+|.+||++.+++++.+
T Consensus 228 ~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~ 259 (260)
T cd06606 228 HLSEEAKDFLRKCLRRDPKKRPTADELLQHPF 259 (260)
T ss_pred ccCHHHHHHHHHhCcCChhhCCCHHHHhhCCC
Confidence 88999999999999999999999999998764
No 246
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=4e-36 Score=309.55 Aligned_cols=253 Identities=29% Similarity=0.493 Sum_probs=206.5
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||+|+||.||++.. .+..||+|+++..... ......+.+|+.+++.++|+||+++++.+.. ..
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~ 72 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND------PKTIKEIADEMKVLELLKHPNLVKYYGVEVH--RE 72 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc------hHHHHHHHHHHHHHHhCCCCChhheeeeEec--CC
Confidence 588899999999999999987 4678999998765211 3346788999999999999999999999876 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.+++|+||+.+++|.+++.+. ..+++..++.++.|++.||.|||++||+|+||||+||+++ ..+.+||+|||++.
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~----~~~~~kl~d~g~~~ 147 (264)
T cd06626 73 KVYIFMEYCSGGTLEELLEHG-RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD----HNGVIKLGDFGCAV 147 (264)
T ss_pred EEEEEEecCCCCcHHHHHhhc-CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC----CCCCEEEccccccc
Confidence 899999999999999998754 3478889999999999999999999999999999999998 67789999999987
Q ss_pred cccCCcc-----cCCCCCCCcccCcccccCCC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCC
Q 001103 1034 IKCNTLV-----SGGVRGTLPWMAPELLNGSN-NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1034 l~~~~~~-----sts~~GTp~YmAPEVL~G~~-~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpei 1107 (1157)
....... .....++..|+|||++.+.. ..++.++||||||+++|+|++|+.||..................+.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 227 (264)
T cd06626 148 KLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPI 227 (264)
T ss_pred ccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCC
Confidence 6433222 12356889999999987543 33788999999999999999999999766433322222222334444
Q ss_pred CCC--CcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1108 PER--CDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1108 p~~--iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+.. +++.+.+||.+||+.+|.+||++.+++.+.|
T Consensus 228 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~ 263 (264)
T cd06626 228 PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263 (264)
T ss_pred CcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCC
Confidence 544 4899999999999999999999999987643
No 247
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=6e-37 Score=316.79 Aligned_cols=250 Identities=24% Similarity=0.381 Sum_probs=209.5
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||+|+||.||+++++ +..||+|++.+..... ....+.+.+|++++++++||||+++++.+.+ ..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 73 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVE-----KGSVRNVLNERRILQELNHPFLVNLWYSFQD--EE 73 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcc-----hhHHHHHHHHHHHHHhCCCCChHHHHHhhcC--CC
Confidence 4889999999999999999985 7889999998643211 1235678899999999999999999999876 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
..++||||+.+++|..++... ..+++..+..++.|++.||.|||+++|+|+||||+||+++ +++.++|+|||++.
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~----~~~~~~l~d~~~~~ 148 (258)
T cd05578 74 NMYLVVDLLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD----EQGHVHITDFNIAT 148 (258)
T ss_pred eEEEEEeCCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc----CCCCEEEeeccccc
Confidence 899999999999999998765 4688999999999999999999999999999999999998 67789999999987
Q ss_pred cccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh--hHHHHHhhhcCCCCCCCCCC
Q 001103 1034 IKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC--GAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1034 l~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~--eeil~~Il~~~lrpeip~~i 1111 (1157)
............|+..|+|||.+.+. .++.++|+||||+++|+|++|..||..... ...+...... .....+..+
T Consensus 149 ~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 225 (258)
T cd05578 149 KVTPDTLTTSTSGTPGYMAPEVLCRQ--GYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-ADVLYPATW 225 (258)
T ss_pred ccCCCccccccCCChhhcCHHHHccc--CCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-ccccCcccC
Confidence 65544344456789999999998754 478899999999999999999999987764 2222222221 445677788
Q ss_pred cHHHHHHHHHHhccCCCCCCCH--HHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSF--TEITNRL 1140 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSa--eELLe~L 1140 (1157)
+..+.++|.+||+.||.+||++ .+++++.
T Consensus 226 ~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~ 256 (258)
T cd05578 226 STEAIDAINKLLERDPQKRLGDNLKDLKNHP 256 (258)
T ss_pred cHHHHHHHHHHccCChhHcCCccHHHHhcCC
Confidence 9999999999999999999999 8877654
No 248
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=8.3e-37 Score=315.51 Aligned_cols=250 Identities=33% Similarity=0.535 Sum_probs=208.2
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||.|+||.||++.++ +..+|+|++..... ......+.+|+++++.++||||+++++.+.. ..
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-------~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~ 72 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-------EAIQKQILRELDILHKCNSPYIVGFYGAFYN--NG 72 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-------hHHHHHHHHHHHHHHHCCCCchhhhheeeec--CC
Confidence 6788899999999999999985 67799998876421 1234678899999999999999999999877 57
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
.++++|||+.+++|.+++......+++..+..++.|++.||.|||+ .+++|+||||+||+++ ..+.++|+|||.+
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~----~~~~~~l~d~g~~ 148 (265)
T cd06605 73 DISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN----SRGQIKLCDFGVS 148 (265)
T ss_pred EEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC----CCCCEEEeecccc
Confidence 8999999999999999997655678999999999999999999999 9999999999999998 6778999999998
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----hhHHHHHhhhcCCCCCC
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH-----CGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~-----~eeil~~Il~~~lrpei 1107 (1157)
.......... ..++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.... .......+... ..+.+
T Consensus 149 ~~~~~~~~~~-~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~ 224 (265)
T cd06605 149 GQLVNSLAKT-FVGTSSYMAPERIQGN--DYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNE-PPPRL 224 (265)
T ss_pred hhhHHHHhhc-ccCChhccCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcC-CCCCC
Confidence 7543332222 6789999999999764 67899999999999999999999997652 22233333322 23334
Q ss_pred CCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1108 PER-CDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1108 p~~-iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+.. +++++++||.+||..+|.+|||+.+++.+.+.
T Consensus 225 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 225 PSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred ChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchh
Confidence 444 88999999999999999999999999998776
No 249
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.8e-36 Score=326.38 Aligned_cols=262 Identities=29% Similarity=0.510 Sum_probs=213.3
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEECC---------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCc
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKWRG---------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPN 939 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~kG---------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPN 939 (1157)
+.+...+|++.+.||+|+||.||++++.+ ..||+|.++... .......+.+|+++++++ +|||
T Consensus 7 ~~~~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~~h~~ 79 (334)
T cd05100 7 WELSRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-------TDKDLSDLVSEMEMMKMIGKHKN 79 (334)
T ss_pred cccCHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-------CHHHHHHHHHHHHHHHhhcCCCC
Confidence 34555689999999999999999997621 258999876431 112246788999999999 7999
Q ss_pred eeEEeeeeecCCCCcEEEEEEeecCCcchhhhccc---------------cccccHHHHHHHHHHHHHHHHHHHHCCcee
Q 001103 940 VVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARK---------------DRILDRRKKLMLMMDAAFGMEYLHMKNIVH 1004 (1157)
Q Consensus 940 IVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~---------------gr~L~e~qVlkIa~QLa~ALeYLHSkGIIH 1004 (1157)
|+++++++.. .+.++++|||+.+++|.+++.+. ...+++..++.++.|++.||.|||++||+|
T Consensus 80 iv~~~~~~~~--~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH 157 (334)
T cd05100 80 IINLLGACTQ--DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIH 157 (334)
T ss_pred eeeeeEEEcc--CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeec
Confidence 9999999877 56789999999999999998642 234778889999999999999999999999
Q ss_pred ccCCccceeeccCCCCCCeEEEEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc
Q 001103 1005 FDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT 1081 (1157)
Q Consensus 1005 RDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT 1081 (1157)
|||||+|||++ .++.+||+|||+++....... .....++..|+|||++.+. .++.++|||||||+||||++
T Consensus 158 ~dlkp~Nill~----~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~il~el~~ 231 (334)
T cd05100 158 RDLAARNVLVT----EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR--VYTHQSDVWSFGVLLWEIFT 231 (334)
T ss_pred cccccceEEEc----CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccC--CcCchhhhHHHHHHHHHHHh
Confidence 99999999998 667899999999875433211 1222345679999999754 57889999999999999998
Q ss_pred -CCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1082 -GEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1082 -Gk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
|..||......+....+.. ......+..++.++.+||.+||+.+|.+|||+.++++.|+.+....
T Consensus 232 ~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 232 LGGSPYPGIPVEELFKLLKE-GHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred cCCCCCCCCCHHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 8999998877776665543 3444566778899999999999999999999999999999887544
No 250
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=2.6e-36 Score=310.66 Aligned_cols=252 Identities=28% Similarity=0.465 Sum_probs=207.5
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++.+.||.|+||+||++.+ .+..+|+|++...... . ....+.+|+++++.++|+||+++++.+.. .
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 71 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ------T-SVDELRKEVQAMSQCNHPNVVKYYTSFVV--G 71 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc------h-HHHHHHHHHHHHHhcCCCCEEEEEEEEee--C
Confidence 3789999999999999999987 4667999998753211 1 34678899999999999999999998877 5
Q ss_pred CcEEEEEEeecCCcchhhhccc--cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 953 GTMATVTEYMVNGSLRHVLARK--DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~--gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
...+++||++++++|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++ +++.+||+|||
T Consensus 72 ~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~----~~~~~~l~df~ 147 (267)
T cd06610 72 DELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG----EDGSVKIADFG 147 (267)
T ss_pred CEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc----CCCCEEEcccc
Confidence 6899999999999999998653 24689999999999999999999999999999999999998 66789999999
Q ss_pred CcccccCCcc-----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1031 LSRIKCNTLV-----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1031 LAkl~~~~~~-----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
++........ .....|+..|+|||++... ..++.++|+|||||++|+|++|+.||........+........ +
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~-~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~ 225 (267)
T cd06610 148 VSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQV-HGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDP-P 225 (267)
T ss_pred hHHHhccCccccccccccccCChhhcChHHHccc-cCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCC-C
Confidence 9875443221 1334689999999998754 3578899999999999999999999987766555555443321 1
Q ss_pred CCC-----CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1106 QIP-----ERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1106 eip-----~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.++ ..+++.+.+||.+||.+||.+||++.+|+++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~ 266 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKF 266 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCC
Confidence 111 256789999999999999999999999998754
No 251
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=4.1e-36 Score=312.97 Aligned_cols=253 Identities=28% Similarity=0.429 Sum_probs=202.8
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.+.....||+|+||.||++++. +..||+|.+.... ....+.+.+|+.+++.++|+||+++++++.. ..
T Consensus 9 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~ 78 (268)
T cd06624 9 ENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--------SRYVQPLHEEIALHSYLKHRNIVQYLGSDSE--NG 78 (268)
T ss_pred cCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--------HHHHHHHHHHHHHHHhcCCCCeeeeeeeecc--CC
Confidence 3444568999999999999874 5669999876531 1124578899999999999999999999887 56
Q ss_pred cEEEEEEeecCCcchhhhccccccc--cHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRIL--DRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L--~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
..+++|||+.+++|.+++......+ ++..+..++.|++.||.|||++||+||||||+|||++. ..+.+||+|||+
T Consensus 79 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~---~~~~~~l~dfg~ 155 (268)
T cd06624 79 FFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT---YSGVVKISDFGT 155 (268)
T ss_pred EEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC---CCCeEEEecchh
Confidence 8999999999999999987654445 78888999999999999999999999999999999972 356899999999
Q ss_pred cccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhH-HHHHhhhcCCCCCCCC
Q 001103 1032 SRIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGA-IIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1032 Akl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~ee-il~~Il~~~lrpeip~ 1109 (1157)
+...... .......|++.|+|||.+.+....++.++|+||||+++|+|++|+.||....... ...........+.++.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (268)
T cd06624 156 SKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPE 235 (268)
T ss_pred heecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCc
Confidence 8754322 2223346899999999987554457889999999999999999999997654322 1112211223345677
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+++++++||.+||+.+|.+|||+.+++.+.+
T Consensus 236 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~ 267 (268)
T cd06624 236 SLSAEAKNFILRCFEPDPDKRASAHDLLQDPF 267 (268)
T ss_pred ccCHHHHHHHHHHcCCCchhCCCHHHHHhCCC
Confidence 78999999999999999999999999998754
No 252
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4.5e-36 Score=302.72 Aligned_cols=248 Identities=30% Similarity=0.534 Sum_probs=207.9
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|+..+.||+|++|.||++.+. +..+++|++..... .....+.+|+.+++.++||+|+++++++.. ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~ 70 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--------EKKEKIINEIQILKKCKHPNIVKYYGSYLK--KD 70 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--------hHHHHHHHHHHHHHhCCCCCEeEEEEEEec--CC
Confidence 5788999999999999999985 77799999876421 234678899999999999999999999887 46
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
..+++|||+++++|.+++....+.+++..++.++.|++.||.|||++|++||||+|+||+++ ..+.++|+|||.+.
T Consensus 71 ~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~----~~~~~~l~d~~~~~ 146 (253)
T cd05122 71 ELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT----SDGEVKLIDFGLSA 146 (253)
T ss_pred eEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc----cCCeEEEeeccccc
Confidence 78999999999999999877656789999999999999999999999999999999999998 67899999999987
Q ss_pred cccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC--CCC
Q 001103 1034 IKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP--ERC 1111 (1157)
Q Consensus 1034 l~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip--~~i 1111 (1157)
............++..|+|||.+.+. .++.++|+||||+++|+|++|+.||................ .+.++ ..+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 223 (253)
T cd05122 147 QLSDTKARNTMVGTPYWMAPEVINGK--PYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNG-PPGLRNPEKW 223 (253)
T ss_pred cccccccccceecCCcccCHHHHcCC--CCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcC-CCCcCccccc
Confidence 65544323446789999999998754 46889999999999999999999998775544444433322 22222 234
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
+..+.++|.+||+.||.+|||+.+++++.
T Consensus 224 ~~~~~~~i~~~l~~~p~~R~t~~~~l~~~ 252 (253)
T cd05122 224 SDEFKDFLKKCLQKNPEKRPTAEQLLKHP 252 (253)
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHhcCC
Confidence 88999999999999999999999999864
No 253
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.2e-37 Score=322.04 Aligned_cols=257 Identities=27% Similarity=0.463 Sum_probs=209.0
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
...+|++++.||+|+||+||++++. +..||+|++.... .......+.+|+++++.++||||+++++.+..
T Consensus 3 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~- 74 (284)
T cd06620 3 RNEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-------KSSVRKQILRELQIMHECRSPYIVSFYGAFLN- 74 (284)
T ss_pred cHHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-------cchHHHHHHHHHHHHHHcCCCCcceEeeeEec-
Confidence 3468889999999999999999985 7789999887531 12234678899999999999999999999987
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
...+++||||+++++|..++.+. +.+++..++.++.+++.+|.|||+ .+|+||||||+||+++ ..+.++|+||
T Consensus 75 -~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~----~~~~~~l~d~ 148 (284)
T cd06620 75 -ENNICMCMEFMDCGSLDRIYKKG-GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN----SRGQIKLCDF 148 (284)
T ss_pred -CCEEEEEEecCCCCCHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC----CCCcEEEccC
Confidence 46899999999999999888654 358899999999999999999997 5899999999999998 6778999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-----------HHHHHh
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-----------AIIGGI 1098 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-----------eil~~I 1098 (1157)
|++....... .....|+..|+|||++.+. .++.++|+|||||++|+|++|+.||...... ..+..+
T Consensus 149 gl~~~~~~~~-~~~~~~~~~~~aPE~~~~~--~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 225 (284)
T cd06620 149 GVSGELINSI-ADTFVGTSTYMSPERIQGG--KYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQI 225 (284)
T ss_pred Ccccchhhhc-cCccccCcccCCHHHHccC--CCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHH
Confidence 9986532222 2345799999999998754 5788999999999999999999999865432 222333
Q ss_pred hhcCCCCCCCC-CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1099 LSNTLRPQIPE-RCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1099 l~~~lrpeip~-~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
.... .+.++. .++.++.+||.+||+.||.+|||+.+++++++.+....
T Consensus 226 ~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~ 274 (284)
T cd06620 226 VQEP-PPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALR 274 (284)
T ss_pred hhcc-CCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccc
Confidence 2222 222333 37889999999999999999999999999987766443
No 254
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.1e-36 Score=320.24 Aligned_cols=252 Identities=26% Similarity=0.420 Sum_probs=207.0
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++++.||+|+||.||++.+ .+..||+|.+...... ....+.+|+.+++.+.||||+++++.+.. .
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--------~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--~ 89 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--------KKELIINEILVMRENKNPNIVNYLDSYLV--G 89 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--------hHHHHHHHHHHHHhCCCCCEeeEEEEEEe--C
Confidence 5899999999999999999987 4678999988754211 13567889999999999999999999887 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...|+||||+++++|.+++.+ ..+++.+++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++
T Consensus 90 ~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~----~~~~~kl~dfg~~ 163 (296)
T cd06654 90 DELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG----MDGSVKLTDFGFC 163 (296)
T ss_pred CEEEEeecccCCCCHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc----CCCCEEECccccc
Confidence 689999999999999998854 3478889999999999999999999999999999999998 6678999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc-CCCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN-TLRPQIPER 1110 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~-~lrpeip~~ 1110 (1157)
....... ......|++.|+|||.+.+. .++.++|+|||||++|+|++|+.||...........+... ......+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (296)
T cd06654 164 AQITPEQSKRSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEK 241 (296)
T ss_pred hhccccccccCcccCCccccCHHHHcCC--CCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccc
Confidence 7533221 22335689999999998753 4688999999999999999999999876654333333222 222234566
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+++.+.+||.+||..+|.+||++.+++++.+...
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~ 275 (296)
T cd06654 242 LSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (296)
T ss_pred cCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhc
Confidence 8899999999999999999999999999876543
No 255
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=4.6e-36 Score=309.18 Aligned_cols=251 Identities=22% Similarity=0.425 Sum_probs=210.3
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++++.||+|+||.||+++. .++.||+|++...... ......+.+|+.++++++||||+++++++.. .+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~ 72 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS------PKEREESRKEVAVLSNMKHPNIVQYQESFEE--NG 72 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC------hHHHHHHHHHHHHHHhCCCCCeeeeEeeecC--CC
Confidence 588999999999999999987 4678999998754221 1123577899999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++||||+.+++|.+++... ...+++..++.++.|++.||.|||+++++|+||+|+|||++ .++.++|+|||++
T Consensus 73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~----~~~~~~l~d~~~~ 148 (256)
T cd08218 73 NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT----KDGTIKLGDFGIA 148 (256)
T ss_pred eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc----CCCCEEEeeccce
Confidence 899999999999999888653 34578999999999999999999999999999999999998 6678999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
....... ......|++.|+|||++.+. .++.++|+|||||++|+|++|+.||...........+..... +..+..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 225 (256)
T cd08218 149 RVLNSTVELARTCIGTPYYLSPEICENR--PYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSY-PPVSSHY 225 (256)
T ss_pred eecCcchhhhhhccCCccccCHHHhCCC--CCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCC-CCCcccC
Confidence 7543322 12234588999999998754 568899999999999999999999988777666666654433 3456778
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+.+++++|.+||+.+|.+||++.+++++.+
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~ 255 (256)
T cd08218 226 SYDLRNLVSQLFKRNPRDRPSVNSILEKNF 255 (256)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhhCcC
Confidence 999999999999999999999999998754
No 256
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.5e-36 Score=320.81 Aligned_cols=255 Identities=28% Similarity=0.379 Sum_probs=205.9
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|+||.||+|+++ ++.+|+|.++..... +.....+.+|+.++++++||||+++++++.....
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 78 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK------EGFPITSLREINILLKLQHPNIVTVKEVVVGSNL 78 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc------ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCC
Confidence 47889999999999999999984 677999998765221 1123456789999999999999999999877545
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...|+||||+.+ +|.+++......+++..++.++.|++.||+|||+++|+|+||||+|||++ .++.+||+|||++
T Consensus 79 ~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~----~~~~~~l~d~g~~ 153 (293)
T cd07843 79 DKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN----NRGILKICDFGLA 153 (293)
T ss_pred CcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC----CCCcEEEeecCce
Confidence 789999999975 89888876666789999999999999999999999999999999999998 6789999999998
Q ss_pred ccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc----------
Q 001103 1033 RIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN---------- 1101 (1157)
Q Consensus 1033 kl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~---------- 1101 (1157)
...... .......+++.|+|||.+.+. ..++.++|+||||+++|+|++|.+||........+..+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (293)
T cd07843 154 REYGSPLKPYTQLVVTLWYRAPELLLGA-KEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232 (293)
T ss_pred eeccCCccccccccccccccCchhhcCC-ccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence 765443 223334588999999998754 24688999999999999999999999876655444333211
Q ss_pred -------------------CCCCCCCCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1102 -------------------TLRPQIPER-CDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1102 -------------------~lrpeip~~-iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.....++.. +++.+++||.+||+.+|++|||+++++++-|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~ 292 (293)
T cd07843 233 GFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPY 292 (293)
T ss_pred HhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCC
Confidence 001112222 5888999999999999999999999998744
No 257
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=4.6e-36 Score=313.36 Aligned_cols=247 Identities=26% Similarity=0.470 Sum_probs=192.7
Q ss_pred EEecccCcEEEEEEEECC----ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEE
Q 001103 881 QELGSGTFGTVYRGKWRG----TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~kG----t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~Ly 956 (1157)
+.||+|+||.||+|++.+ ..+|+|.++.... ......+.+|+.++++++||||+++++++.+ ....+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~~~ 71 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-------VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE--VTPYL 71 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-------hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC--CCCcE
Confidence 368999999999998743 3589998765421 1123467889999999999999999999877 45789
Q ss_pred EEEEeecCCcchhhhcccc----ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 957 TVTEYMVNGSLRHVLARKD----RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~g----r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+||||+++|+|.+++.... ..+++..++.++.|++.||.|||+++++||||||+|||++ ..+.+||+|||++
T Consensus 72 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~----~~~~~kL~dfg~~ 147 (269)
T cd05087 72 LVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT----ADLTVKIGDYGLS 147 (269)
T ss_pred EEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc----CCCcEEECCcccc
Confidence 9999999999999986432 2356677888999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc---ccCCCCCCCcccCcccccCCC-----CCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcC-
Q 001103 1033 RIKCNTL---VSGGVRGTLPWMAPELLNGSN-----NRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNT- 1102 (1157)
Q Consensus 1033 kl~~~~~---~sts~~GTp~YmAPEVL~G~~-----~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~- 1102 (1157)
....... ......++..|+|||++.+.. ..++.++|+||||+++|||++ |+.||................
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~ 227 (269)
T cd05087 148 HNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQ 227 (269)
T ss_pred ccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhccc
Confidence 7543322 122345788999999986421 135789999999999999996 999998776555443332221
Q ss_pred ---CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 ---LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 ---lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
..+.+....++.+.++|..|+ .+|.+|||+++|+..|.
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 228 LKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 122333456788999999999 68999999999998763
No 258
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=4.4e-36 Score=321.12 Aligned_cols=260 Identities=31% Similarity=0.566 Sum_probs=210.1
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEE--CCc----eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEe
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKW--RGT----DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFY 944 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~--kGt----~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLy 944 (1157)
.++..+|++++.||+|+||.||++.+ .+. .+|+|++.... .......+.+|+.+++.++||||++++
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~~~~l~h~niv~~~ 75 (303)
T cd05110 3 ILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-------GPKANVEFMDEALIMASMDHPHLVRLL 75 (303)
T ss_pred ccchhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-------CHHHHHHHHHHHHHHHhCCCCCcccEE
Confidence 45667899999999999999999987 343 36778765431 112234678899999999999999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
+++... ..++++||+++|+|.+++......+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+
T Consensus 76 ~~~~~~---~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~----~~~~~ 148 (303)
T cd05110 76 GVCLSP---TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK----SPNHV 148 (303)
T ss_pred EEEcCC---CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec----CCCce
Confidence 998652 36789999999999999877666688999999999999999999999999999999999998 66789
Q ss_pred EEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhh
Q 001103 1025 KVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILS 1100 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~ 1100 (1157)
||+|||+++...... ......++..|+|||.+.+. .++.++|||||||++|||++ |..||.+......... ..
T Consensus 149 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~-~~ 225 (303)
T cd05110 149 KITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR--KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL-LE 225 (303)
T ss_pred EEccccccccccCcccccccCCCccccccCCHHHhccC--CCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH
Confidence 999999997543221 12233467789999998754 57899999999999999997 9999987665444333 33
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1101 NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1101 ~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
.......+..++..+.++|..||..+|++||+++++++.|+.+....
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 226 KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 33444455667899999999999999999999999999999876543
No 259
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=3.8e-36 Score=315.92 Aligned_cols=255 Identities=26% Similarity=0.453 Sum_probs=212.0
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..|+.++.||+|+||.||+|.++ +..||||++..... ......+.+|+.+++.+.||||+++++.+.+ .
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 74 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-------EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--G 74 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-------HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--C
Confidence 35778899999999999999874 67799999875411 1224678899999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+.+++|.+++.. ..+++..+..++.|++.||.|||+++++|+||+|+||+++ ..+.++|+|||++
T Consensus 75 ~~~~lv~e~~~~~~L~~~i~~--~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~----~~~~~~l~dfg~~ 148 (277)
T cd06640 75 TKLWIIMEYLGGGSALDLLRA--GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS----EQGDVKLADFGVA 148 (277)
T ss_pred CEEEEEEecCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc----CCCCEEEcccccc
Confidence 689999999999999998864 3478889999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
....... ......++..|+|||.+.+. .++.++|+|||||++|+|++|+.||...........+ .....+.++..+
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~apE~~~~~--~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~ 225 (277)
T cd06640 149 GQLTDTQIKRNTFVGTPFWMAPEVIQQS--AYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI-PKNNPPTLTGEF 225 (277)
T ss_pred eeccCCccccccccCcccccCHhHhccC--CCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhh-hcCCCCCCchhh
Confidence 7543322 22334688899999998754 5789999999999999999999999877665554443 233345566678
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
+..+.+||.+||+.+|.+||++.+++++.+......
T Consensus 226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~ 261 (277)
T cd06640 226 SKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK 261 (277)
T ss_pred hHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence 899999999999999999999999999977765544
No 260
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5.5e-36 Score=320.06 Aligned_cols=254 Identities=26% Similarity=0.418 Sum_probs=207.9
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++++.||+|+||.||++++. ++.||+|.+.+... ........+.+|+++++.++||||+++++.+.. .
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-----~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~ 73 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL-----ILRNQIQQVFVERDILTFAENPFVVSMFCSFET--K 73 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh-----hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEec--C
Confidence 37899999999999999999884 56799998876421 112234677899999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+++||||+++++|.+++... +.+++..+..++.|++.||.|||+++|+||||||+|||++ ..+.+||+|||++
T Consensus 74 ~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~----~~~~~~l~dfg~~ 148 (305)
T cd05609 74 RHLCMVMEYVEGGDCATLLKNI-GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT----SMGHIKLTDFGLS 148 (305)
T ss_pred CEEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC----CCCCEEEeeCCCc
Confidence 6899999999999999999655 4588999999999999999999999999999999999998 6779999999988
Q ss_pred ccccCC----------------cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHH
Q 001103 1033 RIKCNT----------------LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIG 1096 (1157)
Q Consensus 1033 kl~~~~----------------~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~ 1096 (1157)
+..... .......|+..|+|||.+.+. .++.++|+|||||++|+|++|..||.+....+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~ 226 (305)
T cd05609 149 KIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQ--GYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFG 226 (305)
T ss_pred cccCcCccccccccccccchhhccccCCccCccccCchhccCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 631110 011124578899999998753 57899999999999999999999999877777666
Q ss_pred HhhhcCCC-CCCCCCCcHHHHHHHHHHhccCCCCCCC---HHHHHHHHHH
Q 001103 1097 GILSNTLR-PQIPERCDPEWRKLMEECWSFNPAARPS---FTEITNRLRV 1142 (1157)
Q Consensus 1097 ~Il~~~lr-peip~~iSpeLrdLIkrCLqkDPskRPS---aeELLe~Lr~ 1142 (1157)
.+...... +.....+++++++||.+||+.+|.+||+ +.+++++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~ 276 (305)
T cd05609 227 QVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFF 276 (305)
T ss_pred HHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccc
Confidence 66554332 2223357899999999999999999998 6788887654
No 261
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=3.4e-36 Score=309.29 Aligned_cols=242 Identities=28% Similarity=0.472 Sum_probs=190.9
Q ss_pred EEecccCcEEEEEEEECCce------------EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 881 QELGSGTFGTVYRGKWRGTD------------IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~kGt~------------VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
+.||+|+||.||++.+.... +++|++.... . ....+.+|+.+++.++||||+++++++.
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--------~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 71 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH--------R-DSLAFFETASLMSQLSHKHLVKLYGVCV 71 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch--------h-hHHHHHHHHHHHHcCCCcchhheeeEEe
Confidence 36899999999999985333 6777655431 1 1467889999999999999999999887
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCC---CCCCeEE
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRD---PQRPICK 1025 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd---~e~g~VK 1025 (1157)
. ...++||||+.+++|.+++.+....+++..++.++.||+.||.|||+++|+||||||+|||++.++ .....+|
T Consensus 72 ~---~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~k 148 (259)
T cd05037 72 R---DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIK 148 (259)
T ss_pred c---CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEE
Confidence 6 346899999999999999977665689999999999999999999999999999999999998322 1123799
Q ss_pred EEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCC
Q 001103 1026 VGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLR 1104 (1157)
Q Consensus 1026 LiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lr 1104 (1157)
|+|||++..... .....++..|+|||++.+....++.++|+|||||++|+|++ |..||...............
T Consensus 149 l~Dfg~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~~~--- 222 (259)
T cd05037 149 LSDPGIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQDQ--- 222 (259)
T ss_pred eCCCCccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHhcC---
Confidence 999999876443 22345778899999987653467899999999999999999 68888766533332222211
Q ss_pred CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1105 PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1105 peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
...+......+.+||.+||..+|.+|||+.++++.|
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 223 HRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 112222347899999999999999999999999876
No 262
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=1.1e-35 Score=305.66 Aligned_cols=251 Identities=31% Similarity=0.519 Sum_probs=210.6
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||+|++|.||++++. +..|+||++..... ......+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~-------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 71 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD-------EEFRKQLLRELKTLRSCESPYVVKCYGAFYK--E 71 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc-------hHHHHHHHHHHHHHHhcCCCCeeeEEEEEcc--C
Confidence 37899999999999999999884 77799998876421 1234678899999999999999999999887 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
..++++|||+++++|.+++... ..+++..++.++.|++.||.|||+ ++++||||+|+||+++ .++.++|+|||+
T Consensus 72 ~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~----~~~~~~l~df~~ 146 (264)
T cd06623 72 GEISIVLEYMDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN----SKGEVKIADFGI 146 (264)
T ss_pred CeEEEEEEecCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC----CCCCEEEccCcc
Confidence 6899999999999999999755 458999999999999999999999 9999999999999998 678999999999
Q ss_pred cccccCCccc-CCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hhHHHHHhhhcCCCCCC
Q 001103 1032 SRIKCNTLVS-GGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH---CGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1032 Akl~~~~~~s-ts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~---~eeil~~Il~~~lrpei 1107 (1157)
+......... ....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||.... .......+.. ...+.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~-~~~~~~ 223 (264)
T cd06623 147 SKVLENTLDQCNTFVGTVTYMSPERIQGE--SYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICD-GPPPSL 223 (264)
T ss_pred ceecccCCCcccceeecccccCHhhhCCC--CCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhc-CCCCCC
Confidence 8765433322 245688999999998754 67889999999999999999999998774 3344444443 333445
Q ss_pred CCC-CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1108 PER-CDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1108 p~~-iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+.. ++..+.++|.+||..+|.+||++.+++++.+.
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~ 259 (264)
T cd06623 224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFI 259 (264)
T ss_pred CcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHH
Confidence 555 88999999999999999999999999998665
No 263
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.3e-36 Score=316.23 Aligned_cols=242 Identities=28% Similarity=0.525 Sum_probs=193.6
Q ss_pred EecccCcEEEEEEEECC---------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 882 ELGSGTFGTVYRGKWRG---------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~kG---------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.||+|+||.||+|.++. ..+|+|.+... .....+.+.+|..+++.++||||+++++++.. .
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~--------~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~--~ 71 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS--------HRNYSESFFEAASMMSQLSHKHLVLNYGVCVC--G 71 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcch--------hHHHHHHHHHHHHHHHhCCCCChhheeeEEEe--C
Confidence 59999999999998742 23777766432 12234678889999999999999999999987 4
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCC----CCCCeEEEEe
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRD----PQRPICKVGD 1028 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd----~e~g~VKLiD 1028 (1157)
...++||||+.+|+|..++...+..+++..++.++.||+.||+|||++||+||||||+|||++.++ .....++|+|
T Consensus 72 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d 151 (258)
T cd05078 72 DESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSD 151 (258)
T ss_pred CCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecc
Confidence 568899999999999999987666789999999999999999999999999999999999998432 1223489999
Q ss_pred cCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcC-CCCCCCCChhHHHHHhhhcCCCCCC
Q 001103 1029 FGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITG-EEPYANMHCGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1029 FGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTG-k~PF~g~~~eeil~~Il~~~lrpei 1107 (1157)
||++...... ....++..|+|||++.+. ..++.++|||||||++|+|++| ..||.......... .... ...+
T Consensus 152 ~g~~~~~~~~---~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~-~~~~--~~~~ 224 (258)
T cd05078 152 PGISITVLPK---EILLERIPWVPPECIENP-QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ-FYED--RHQL 224 (258)
T ss_pred cccccccCCc---hhccccCCccCchhccCC-CCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH-HHHc--cccC
Confidence 9998654332 224688899999998753 3468899999999999999998 56776655443332 2222 2345
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
+...+.++.+||.+||+.||.+|||+++|++.|
T Consensus 225 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 225 PAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred CCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 666778999999999999999999999999876
No 264
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=9.7e-37 Score=355.37 Aligned_cols=255 Identities=25% Similarity=0.347 Sum_probs=212.0
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-C-----CceeEEeeee
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-H-----PNVVAFYGVV 947 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-H-----PNIVkLygvf 947 (1157)
+|++++.||+|+||.|.+|.+. +..||||++++.. ....+...|+++|+.|+ | -|+|+++++|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---------~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---------RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---------HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 8899999999999999999884 6679999999752 23456678999999997 4 3899999999
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
.. .+++|||+|.+.. +|+++|+.+ ...++...++.++.||+.||.+||+.||||+|||||||||.. .....|||
T Consensus 258 ~f--r~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~--~~r~~vKV 332 (586)
T KOG0667|consen 258 YF--RNHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKD--PKRSRIKV 332 (586)
T ss_pred cc--ccceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeecc--CCcCceeE
Confidence 88 7799999999855 999999875 366999999999999999999999999999999999999973 34558999
Q ss_pred EecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC----
Q 001103 1027 GDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT---- 1102 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~---- 1102 (1157)
+|||.|........ ..+-+..|+|||++.|. +|+.+.|+||||||++||++|.+.|.+....+.+..|+.-.
T Consensus 333 IDFGSSc~~~q~vy--tYiQSRfYRAPEVILGl--pY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp 408 (586)
T KOG0667|consen 333 IDFGSSCFESQRVY--TYIQSRFYRAPEVILGL--PYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPP 408 (586)
T ss_pred EecccccccCCcce--eeeeccccccchhhccC--CCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCC
Confidence 99999987555443 46789999999999976 68999999999999999999999999998887777665300
Q ss_pred -------------CC-----C----------------------------CCC-----------CCCcHHHHHHHHHHhcc
Q 001103 1103 -------------LR-----P----------------------------QIP-----------ERCDPEWRKLMEECWSF 1125 (1157)
Q Consensus 1103 -------------lr-----p----------------------------eip-----------~~iSpeLrdLIkrCLqk 1125 (1157)
+. + ..| ......+.+||++||.+
T Consensus 409 ~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~ 488 (586)
T KOG0667|consen 409 PKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEW 488 (586)
T ss_pred HHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhcc
Confidence 00 0 011 01124578999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHh
Q 001103 1126 NPAARPSFTEITNRLRVMSTALQ 1148 (1157)
Q Consensus 1126 DPskRPSaeELLe~Lr~Lk~aLe 1148 (1157)
||.+|+|+.+.++|.+.-.....
T Consensus 489 dP~~R~tp~qal~Hpfl~~~~~~ 511 (586)
T KOG0667|consen 489 DPAERITPAQALNHPFLTGTSLE 511 (586)
T ss_pred CchhcCCHHHHhcCccccccccc
Confidence 99999999999999887754443
No 265
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=5.5e-37 Score=338.45 Aligned_cols=258 Identities=27% Similarity=0.363 Sum_probs=211.6
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCc-eeEEeeeeecCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPN-VVAFYGVVPNGP 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPN-IVkLygvf~de~ 951 (1157)
..|+.+++||+|+||+||+|+. .|..||+|+++..... +-......+|+.+|+.|+|+| ||.+++++....
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~------EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~ 84 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE------EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSN 84 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc------cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecc
Confidence 3567778899999999999988 5778999999865321 112355679999999999999 999999998743
Q ss_pred ----CCcEEEEEEeecCCcchhhhcccc---ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 952 ----GGTMATVTEYMVNGSLRHVLARKD---RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 952 ----~~~LyLVMEYmeGGSL~dlLkr~g---r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
.+.+++||||+.. +|..++.... +.++...+..++.||+.||.|||+++|+||||||+||||+ +.+.+
T Consensus 85 ~~~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~----~~G~l 159 (323)
T KOG0594|consen 85 NHRGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLIS----SSGVL 159 (323)
T ss_pred cccccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEEC----CCCcE
Confidence 2479999999966 8988887655 4688899999999999999999999999999999999999 78899
Q ss_pred EEEecCCccccc-CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC
Q 001103 1025 KVGDFGLSRIKC-NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL 1103 (1157)
Q Consensus 1025 KLiDFGLAkl~~-~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l 1103 (1157)
||+|||+|+... +....+..++|.+|.|||++.|.. .|+..+||||+|||++||++++..|.+....+.+..|....-
T Consensus 160 KlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~-~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lG 238 (323)
T KOG0594|consen 160 KLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGST-SYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLG 238 (323)
T ss_pred eeeccchHHHhcCCcccccccEEEeeccCHHHhcCCC-cCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcC
Confidence 999999998655 333456677999999999999874 489999999999999999999999999988777777643111
Q ss_pred CC----------------CCC------------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1104 RP----------------QIP------------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1104 rp----------------eip------------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.+ .++ ...++...+++.+||+.+|.+|.|++..+.|..+..
T Consensus 239 tP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h~yf~~ 307 (323)
T KOG0594|consen 239 TPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTHPYFSE 307 (323)
T ss_pred CCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcChhhcc
Confidence 11 111 112347889999999999999999999999855443
No 266
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=341.98 Aligned_cols=255 Identities=32% Similarity=0.538 Sum_probs=201.2
Q ss_pred CCeeEEEEecccCcEEEEEEEECC-ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWRG-TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~kG-t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.+|..-..||+|+||.||+|...+ +.||||++...... . ..+|.+|+.++.+++|||+|+|+|+|.+...
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~------~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~- 145 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQ------G--EREFLNEVEILSRLRHPNLVKLLGYCLEGGE- 145 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCc------c--hhHHHHHHHHHhcCCCcCcccEEEEEecCCc-
Confidence 467777889999999999999964 88999987764211 0 2459999999999999999999999988322
Q ss_pred cEEEEEEeecCCcchhhhccccc-cccHHHHHHHHHHHHHHHHHHHHCC---ceeccCCccceeeccCCCCCCeEEEEec
Q 001103 954 TMATVTEYMVNGSLRHVLARKDR-ILDRRKKLMLMMDAAFGMEYLHMKN---IVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr-~L~e~qVlkIa~QLa~ALeYLHSkG---IIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
..+||+|||++|+|.+.|..... .++|.++++|+.+++.||+|||+.. |||||||++|||+| ++...||+||
T Consensus 146 ~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD----~~~~aKlsDF 221 (361)
T KOG1187|consen 146 HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD----EDFNAKLSDF 221 (361)
T ss_pred eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC----CCCCEEccCc
Confidence 58999999999999999987665 8999999999999999999999864 99999999999999 8889999999
Q ss_pred CCcccccC-CcccCCC-CCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC---hhHHHH---Hh---
Q 001103 1030 GLSRIKCN-TLVSGGV-RGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH---CGAIIG---GI--- 1098 (1157)
Q Consensus 1030 GLAkl~~~-~~~sts~-~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~---~eeil~---~I--- 1098 (1157)
|+|+.... ....... .||.+|+|||.++. ..++.|+|||||||+|+||++|+.|..... ...+.. ..
T Consensus 222 GLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~--g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~ 299 (361)
T KOG1187|consen 222 GLAKLGPEGDTSVSTTVMGTFGYLAPEYAST--GKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEE 299 (361)
T ss_pred cCcccCCccccceeeecCCCCccCChhhhcc--CCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHC
Confidence 99976544 3222222 79999999999974 368999999999999999999998876432 111111 11
Q ss_pred --hhcCCCCCCC-CCCc--HH---HHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1099 --LSNTLRPQIP-ERCD--PE---WRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1099 --l~~~lrpeip-~~iS--pe---LrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+.....+.+. ...+ .+ +..+..+|++.+|.+||+|.++.+.|..+.
T Consensus 300 ~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 300 GKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred cchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 1122223332 2223 23 567888999999999999999988885443
No 267
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.1e-36 Score=316.82 Aligned_cols=258 Identities=26% Similarity=0.340 Sum_probs=206.4
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||+|+||.||+|.++ ++.||||+++....... .......+.+|+++++.++|+||+++++++.+ ..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~ 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEA---KDGINFTALREIKLLQELKHPNIIGLLDVFGH--KS 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccc---cchhhHHHHHHHHHHhhcCCCCChhhhheeec--CC
Confidence 4788899999999999999884 67899999986533211 12234567789999999999999999999987 66
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.+++||||+ +++|.+++......+++..++.++.||+.||.|||++||+|+||||+|||++ .++.+||+|||++.
T Consensus 76 ~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~----~~~~~~l~dfg~~~ 150 (298)
T cd07841 76 NINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA----SDGVLKLADFGLAR 150 (298)
T ss_pred EEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc----CCCCEEEccceeee
Confidence 899999999 8899999976554689999999999999999999999999999999999998 67789999999997
Q ss_pred cccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC-------
Q 001103 1034 IKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP------- 1105 (1157)
Q Consensus 1034 l~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp------- 1105 (1157)
...... ......+++.|+|||.+.+. ..++.++|+|||||++|+|++|.+||........+..+......+
T Consensus 151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 151 SFGSPNRKMTHQVVTRWYRAPELLFGA-RHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPG 229 (298)
T ss_pred eccCCCccccccccceeeeCHHHHhCC-CCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhh
Confidence 644332 22334578899999998653 356889999999999999999988888766544443332110000
Q ss_pred -------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1106 -------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1106 -------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
......+.++.+||.+||++||.+|||+.+++++-+.-.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~ 287 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSN 287 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccC
Confidence 011235678999999999999999999999999866543
No 268
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.5e-35 Score=317.18 Aligned_cols=252 Identities=27% Similarity=0.429 Sum_probs=209.6
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++++.||.|+||.||++.+ .++.||+|.+..... .....+.+|+.+++.++||||+++++++.. .
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~ 88 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--------PKKELIINEILVMKELKNPNIVNFLDSFLV--G 88 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--------chHHHHHHHHHHHHhcCCCceeeeeeeEec--C
Confidence 5799999999999999999986 577899998865321 113567889999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+++||||+.+++|..++... .+++.+++.++.|++.||.|||++|++||||||+||+++ ..+.+||+|||++
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~----~~~~~kl~dfg~~ 162 (296)
T cd06655 89 DELFVVMEYLAGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG----MDGSVKLTDFGFC 162 (296)
T ss_pred ceEEEEEEecCCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC----CCCCEEEccCccc
Confidence 6899999999999999988643 488999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC-CCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT-LRPQIPER 1110 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~-lrpeip~~ 1110 (1157)
....... ......++..|+|||.+.+. .++.++|+|||||++|+|++|+.||...........+.... .....+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T cd06655 163 AQITPEQSKRSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEK 240 (296)
T ss_pred hhcccccccCCCcCCCccccCcchhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCccc
Confidence 7543322 22335689999999998754 57889999999999999999999998876655444443322 22334567
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+++.+.+||.+||..||.+||++.+++++.+.-.
T Consensus 241 ~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~ 274 (296)
T cd06655 241 LSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKL 274 (296)
T ss_pred CCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhh
Confidence 8899999999999999999999999999887754
No 269
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=6.9e-36 Score=314.78 Aligned_cols=253 Identities=26% Similarity=0.410 Sum_probs=199.0
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
.++|++.+.||+|+||.||+++. .++.||||.+....... ....+.+|+++++.++||||+++++++.+
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 74 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG-------APFTAIREASLLKDLKHANIVTLHDIIHT-- 74 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC-------CchhHHHHHHHHhhCCCcceeeEEEEEec--
Confidence 36899999999999999999988 46789999987642111 11345689999999999999999999887
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
....++||||+.+ +|.+++.+....+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+|||+
T Consensus 75 ~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~----~~~~~kl~dfg~ 149 (291)
T cd07844 75 KKTLTLVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS----ERGELKLADFGL 149 (291)
T ss_pred CCeEEEEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc----CCCCEEECcccc
Confidence 5689999999985 89988877666789999999999999999999999999999999999998 677899999999
Q ss_pred cccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hhHHHHHhhhc---C----
Q 001103 1032 SRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH-CGAIIGGILSN---T---- 1102 (1157)
Q Consensus 1032 Akl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~-~eeil~~Il~~---~---- 1102 (1157)
+....... ......++..|+|||++.+. ..++.++||||||+++|+|++|+.||.... ..+.+..+... .
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (291)
T cd07844 150 ARAKSVPSKTYSNEVVTLWYRPPDVLLGS-TEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEET 228 (291)
T ss_pred ccccCCCCccccccccccccCCcHHhhcC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhh
Confidence 87543221 12233578899999998753 346889999999999999999999997655 22222211100 0
Q ss_pred --------------CC---C----CCCCCCc--HHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 --------------LR---P----QIPERCD--PEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 --------------lr---p----eip~~iS--peLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.. . .....++ +.+.++|.+||+.+|.+|||+.+++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~ 290 (291)
T cd07844 229 WPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPY 290 (291)
T ss_pred hhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCC
Confidence 00 0 0001233 78899999999999999999999998654
No 270
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=9e-36 Score=318.71 Aligned_cols=255 Identities=26% Similarity=0.417 Sum_probs=207.7
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..|++.+.||+|+||+||++++ .+..||+|++...... .......+.+|+++++.++||||+++++++.. .
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-----~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~--~ 87 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-----SNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR--E 87 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccC-----cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe--C
Confidence 4688899999999999999987 4778999988654211 12224568899999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+.+ +|.+++......+++..+..++.|++.||.|||+++|+||||+|+||+++ .++.+||+|||++
T Consensus 88 ~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~----~~~~~kL~dfg~~ 162 (307)
T cd06607 88 HTAWLVMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT----EPGTVKLADFGSA 162 (307)
T ss_pred CeEEEEHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC----CCCCEEEeecCcc
Confidence 578999999974 77777655555689999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCcccCCCCCCCcccCcccccC-CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNG-SNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G-~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
...... ....++..|+|||++.+ ....++.++||||||+++|+|++|+.||...........+.........+..+
T Consensus 163 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (307)
T cd06607 163 SLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLSSNDW 239 (307)
T ss_pred eecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCCchhh
Confidence 754332 23568899999998753 12457889999999999999999999998877655555444333322234457
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
++.++++|.+||+.+|.+||++.+++.+.+...
T Consensus 240 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 272 (307)
T cd06607 240 SDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLR 272 (307)
T ss_pred CHHHHHHHHHHhcCChhhCcCHHHHhcChhhcc
Confidence 889999999999999999999999999877644
No 271
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=5.8e-36 Score=316.47 Aligned_cols=242 Identities=27% Similarity=0.444 Sum_probs=192.0
Q ss_pred EecccCcEEEEEEEEC--------------------------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC
Q 001103 882 ELGSGTFGTVYRGKWR--------------------------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL 935 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~k--------------------------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L 935 (1157)
.||+|+||.||+|.+. ...||+|++... .......+.+|+.+++.+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--------~~~~~~~~~~~~~~~~~l 73 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--------HRDIALAFFETASLMSQV 73 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--------HHHHHHHHHHHHHHHhcC
Confidence 5999999999998752 123788877542 122346688899999999
Q ss_pred CCCceeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeec
Q 001103 936 HHPNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVN 1015 (1157)
Q Consensus 936 ~HPNIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd 1015 (1157)
+||||+++++++.. ....++||||+++++|..++.+..+.+++..++.++.|++.||+|||+++|+||||||+|||++
T Consensus 74 ~h~niv~~~~~~~~--~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~ 151 (274)
T cd05076 74 SHIHLAFVHGVCVR--GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLA 151 (274)
T ss_pred CCCCeeeEEEEEEe--CCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEe
Confidence 99999999999887 5578999999999999999876666789999999999999999999999999999999999997
Q ss_pred cCC---CCCCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHH-cCCCCCCCCCh
Q 001103 1016 LRD---PQRPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEII-TGEEPYANMHC 1091 (1157)
Q Consensus 1016 ~dd---~e~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELL-TGk~PF~g~~~ 1091 (1157)
..+ .....+||+|||++...... ....++..|+|||.+.+. ..++.++|+|||||++|||+ +|+.||.....
T Consensus 152 ~~~~~~~~~~~~kl~d~g~~~~~~~~---~~~~~~~~~~aPe~~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~ 227 (274)
T cd05076 152 RLGLAEGTSPFIKLSDPGVSFTALSR---EERVERIPWIAPECVPGG-NSLSTAADKWSFGTTLLEICFDGEVPLKERTP 227 (274)
T ss_pred ccCcccCccceeeecCCccccccccc---cccccCCcccCchhhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCccccCh
Confidence 322 12345899999987543221 223578889999988753 45789999999999999985 69999987654
Q ss_pred hHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1092 GAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1092 eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
...... ... ...++...++.+.+||.+||+.+|.+|||+.++++.|
T Consensus 228 ~~~~~~-~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 228 SEKERF-YEK--KHRLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHH-HHh--ccCCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 433222 222 1223444667899999999999999999999999886
No 272
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7.1e-36 Score=313.30 Aligned_cols=243 Identities=25% Similarity=0.428 Sum_probs=190.2
Q ss_pred EEecccCcEEEEEEEECC--------------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeee
Q 001103 881 QELGSGTFGTVYRGKWRG--------------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGV 946 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~kG--------------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygv 946 (1157)
+.||+|+||.||+|++.. ..+|+|++... .......+.+|+.+++.++||||++++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--------~~~~~~~~~~~~~~l~~l~hp~iv~~~~~ 72 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS--------HRDISLAFFETASMMRQVSHKHIVLLYGV 72 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh--------hhhHHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 368999999999998631 23777776542 12234578889999999999999999999
Q ss_pred eecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCC---CCCe
Q 001103 947 VPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDP---QRPI 1023 (1157)
Q Consensus 947 f~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~---e~g~ 1023 (1157)
+.. ....+++|||+++++|..++.+....+++..++.++.||+.||+|||+++|+||||||+|||++.++. ....
T Consensus 73 ~~~--~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~ 150 (262)
T cd05077 73 CVR--DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPF 150 (262)
T ss_pred Eec--CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCce
Confidence 877 45678999999999999888766667899999999999999999999999999999999999973221 1224
Q ss_pred EEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHH-cCCCCCCCCChhHHHHHhhhcC
Q 001103 1024 CKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEII-TGEEPYANMHCGAIIGGILSNT 1102 (1157)
Q Consensus 1024 VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELL-TGk~PF~g~~~eeil~~Il~~~ 1102 (1157)
+||+|||++...... ....++..|+|||.+... ..++.++|||||||++|+|+ .|..||......+.. ......
T Consensus 151 ~~l~d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~ 225 (262)
T cd05077 151 IKLSDPGIPITVLSR---QECVERIPWIAPECVEDS-KNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQ 225 (262)
T ss_pred eEeCCCCCCccccCc---ccccccccccChhhhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcC
Confidence 899999998654322 234588899999988633 35788999999999999998 589998765543332 222222
Q ss_pred CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1103 LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1103 lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
. ......++++++||.+||+.||.+||++.+|++.+
T Consensus 226 ~--~~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 226 C--MLVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred c--cCCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 2 12233467899999999999999999999999876
No 273
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.2e-36 Score=318.57 Aligned_cols=259 Identities=25% Similarity=0.360 Sum_probs=200.0
Q ss_pred CeeEEEEecccCcEEEEEEEEC----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
.|++.+.||+|+||.||+|.+. +..||+|++...... .......+.+|+.+++.++||||+++++++.+..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ-----YTGISQSACREIALLRELKHENVVSLVEVFLEHA 75 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc-----ccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC
Confidence 4788999999999999999983 577999998864211 1112355678999999999999999999998865
Q ss_pred CCcEEEEEEeecCCcchhhhccc----cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 GGTMATVTEYMVNGSLRHVLARK----DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~----gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
...+++||||+++ +|..++... ...+++..++.++.|++.||.|||+++|+||||||+|||++.++...+.+||+
T Consensus 76 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~ 154 (316)
T cd07842 76 DKSVYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIG 154 (316)
T ss_pred CceEEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEEC
Confidence 5789999999976 666655422 23688999999999999999999999999999999999998544448899999
Q ss_pred ecCCcccccCCc----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhH---------H
Q 001103 1028 DFGLSRIKCNTL----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGA---------I 1094 (1157)
Q Consensus 1028 DFGLAkl~~~~~----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~ee---------i 1094 (1157)
|||++....... ......++..|+|||++.+. ..++.++|+|||||+||+|++|++||....... .
T Consensus 155 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 233 (316)
T cd07842 155 DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGA-RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQ 233 (316)
T ss_pred CCccccccCCCcccccccCCccccccccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHH
Confidence 999987543322 22345688999999988754 346889999999999999999999997654321 1
Q ss_pred HHHhhh------------------------cCCCCCCC-----------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1095 IGGILS------------------------NTLRPQIP-----------ERCDPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1095 l~~Il~------------------------~~lrpeip-----------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
+..+.. ......++ ...+.++.++|.+||+.||.+|||+.+++++
T Consensus 234 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~ 313 (316)
T cd07842 234 LERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEH 313 (316)
T ss_pred HHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111100 00001111 1456789999999999999999999999987
Q ss_pred HH
Q 001103 1140 LR 1141 (1157)
Q Consensus 1140 Lr 1141 (1157)
.+
T Consensus 314 ~~ 315 (316)
T cd07842 314 PY 315 (316)
T ss_pred CC
Confidence 54
No 274
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=4.8e-36 Score=311.21 Aligned_cols=248 Identities=35% Similarity=0.606 Sum_probs=198.8
Q ss_pred EecccCcEEEEEEEECC--------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 882 ELGSGTFGTVYRGKWRG--------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~kG--------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.||+|+||.||++++.. ..+|||.+.+... ......+.+|+.+++.++||||+++++++.. ..
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 72 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGAT-------DQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL--NE 72 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccc-------hhhHHHHHHHHHHHHhcCCCCeeeEeeeecC--CC
Confidence 58999999999998742 4589998764311 1124568889999999999999999999876 55
Q ss_pred cEEEEEEeecCCcchhhhccc------cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCC-CCCCeEEE
Q 001103 954 TMATVTEYMVNGSLRHVLARK------DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRD-PQRPICKV 1026 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~------gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd-~e~g~VKL 1026 (1157)
..+++|||+++++|.+++.+. ...+++..++.++.|++.||+|||+++++|+||||+|||++.++ .....+||
T Consensus 73 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l 152 (269)
T cd05044 73 PQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKI 152 (269)
T ss_pred CeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEE
Confidence 789999999999999988642 23478899999999999999999999999999999999998321 11238999
Q ss_pred EecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcC
Q 001103 1027 GDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNT 1102 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~ 1102 (1157)
+|||++........ .....++..|+|||.+.+. .++.++|||||||++|+|++ |+.||...........+. ..
T Consensus 153 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~-~~ 229 (269)
T cd05044 153 GDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDG--KFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVT-AG 229 (269)
T ss_pred CCcccccccccccccccCcccCCCccccCHHHHccC--CcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHh-cC
Confidence 99999875432211 1223467889999998754 57899999999999999998 999998777666555443 33
Q ss_pred CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.....+..++..+.+||.+||..+|.+||+++++++.|.
T Consensus 230 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 230 GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 344556678899999999999999999999999999875
No 275
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.8e-35 Score=312.95 Aligned_cols=253 Identities=25% Similarity=0.433 Sum_probs=204.8
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||.|++|.||++.+ .++.+|+|.+..... ......+.+|+++++.++||||+++++++.....
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 73 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-------PDLQKQILRELEINKSCKSPYIVKYYGAFLDESS 73 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-------hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCC
Confidence 3689999999999999999998 467799998875411 1234678899999999999999999999877666
Q ss_pred CcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 953 GTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
..+++||||+++++|.+++.. ....+++..+..++.||+.||.|||+.+++|+||+|+||+++ ..+.++|+||
T Consensus 74 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~----~~~~~~l~df 149 (287)
T cd06621 74 SSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT----RKGQVKLCDF 149 (287)
T ss_pred CeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe----cCCeEEEeec
Confidence 789999999999999887643 345588899999999999999999999999999999999998 6678999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC-----hhHHHHHhhhcCCC
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH-----CGAIIGGILSNTLR 1104 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~-----~eeil~~Il~~~lr 1104 (1157)
|++........ ....++..|+|||.+.+. .++.++|+|||||++|+|++|+.||.... ..+....+... ..
T Consensus 150 g~~~~~~~~~~-~~~~~~~~y~~pE~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~ 225 (287)
T cd06621 150 GVSGELVNSLA-GTFTGTSFYMAPERIQGK--PYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNM-PN 225 (287)
T ss_pred ccccccccccc-ccccCCccccCHHHhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcC-Cc
Confidence 99875433222 235688899999998754 57889999999999999999999998652 12233332221 11
Q ss_pred CCCC------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1105 PQIP------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1105 peip------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+.++ ..+++.+++||.+||+.+|.+|||+.+++++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~ 269 (287)
T cd06621 226 PELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWI 269 (287)
T ss_pred hhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCccc
Confidence 1111 2356789999999999999999999999998876
No 276
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=3.6e-36 Score=315.48 Aligned_cols=251 Identities=26% Similarity=0.448 Sum_probs=207.6
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|++++.||+|+||.||+|.+ .+..||+|++.... .....+.+.+|++++++++||||+++++.+.. ..
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 75 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE-------AEDEIEDIQQEITVLSQCDSPYITRYYGSYLK--GT 75 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc-------chHHHHHHHHHHHHHHcCCCCccHhhhccccc--CC
Confidence 456677899999999999987 46779999886431 11234678899999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
..++||||+.+++|.+++.. ..+++..++.++.|++.||.|||+++++|+||+|+||+++ .++.++|+|||++.
T Consensus 76 ~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~----~~~~~~l~dfg~~~ 149 (277)
T cd06642 76 KLWIIMEYLGGGSALDLLKP--GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS----EQGDVKLADFGVAG 149 (277)
T ss_pred ceEEEEEccCCCcHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe----CCCCEEEccccccc
Confidence 89999999999999988854 3578899999999999999999999999999999999998 67789999999987
Q ss_pred cccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCc
Q 001103 1034 IKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1034 l~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iS 1112 (1157)
...... ......|+..|+|||.+.+. .++.++|+|||||++|+|++|+.||...........+. ....+.++..++
T Consensus 150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 226 (277)
T cd06642 150 QLTDTQIKRNTFVGTPFWMAPEVIKQS--AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIP-KNSPPTLEGQYS 226 (277)
T ss_pred cccCcchhhhcccCcccccCHHHhCcC--CCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhh-cCCCCCCCcccC
Confidence 544322 22335688999999999754 57889999999999999999999998766555444332 233445566788
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.++.+||.+||+.+|.+||++.+++++.+...
T Consensus 227 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 258 (277)
T cd06642 227 KPFKEFVEACLNKDPRFRPTAKELLKHKFITR 258 (277)
T ss_pred HHHHHHHHHHccCCcccCcCHHHHHHhHHHHH
Confidence 99999999999999999999999999877543
No 277
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.1e-36 Score=318.82 Aligned_cols=251 Identities=26% Similarity=0.423 Sum_probs=206.5
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++++.||+|+||.||++.. .+..||+|.+...... ..+.+.+|+.+++.++||||+++++++.. .
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--------~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~ 88 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--------KKELIINEILVMRENKNPNIVNYLDSYLV--G 88 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--------hHHHHHHHHHHHHhCCCCCEeeEEEEEec--C
Confidence 6899999999999999999987 4778999988753211 12557889999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+++++|.+++.+ ..+++.++..++.|++.||.|||+.||+||||||+|||++ .++.++|+|||++
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~----~~~~~~l~Dfg~~ 162 (297)
T cd06656 89 DELWVVMEYLAGGSLTDVVTE--TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG----MDGSVKLTDFGFC 162 (297)
T ss_pred CEEEEeecccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC----CCCCEEECcCccc
Confidence 689999999999999998854 3478889999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc-CCCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN-TLRPQIPER 1110 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~-~lrpeip~~ 1110 (1157)
....... ......+++.|+|||.+.+. .++.++|+|||||++|+|++|+.||...........+... ......+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (297)
T cd06656 163 AQITPEQSKRSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPER 240 (297)
T ss_pred eEccCCccCcCcccCCccccCHHHHcCC--CCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccc
Confidence 7543322 22335689999999998754 5688999999999999999999999765543333222222 222234566
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
+++.+++||.+||..+|.+||++++++++.+.-
T Consensus 241 ~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~ 273 (297)
T cd06656 241 LSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLK 273 (297)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCchhc
Confidence 888999999999999999999999999987653
No 278
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=7.9e-36 Score=311.55 Aligned_cols=251 Identities=25% Similarity=0.472 Sum_probs=205.5
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC---CCceeEEeeeeecC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH---HPNVVAFYGVVPNG 950 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~---HPNIVkLygvf~de 950 (1157)
.|++++.||+|+||.||+|.+ .+..||+|+++.... ......+.+|+.+++.+. |||++++++++..
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-------~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~- 73 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP-------DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK- 73 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC-------chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-
Confidence 477889999999999999998 467899999875311 112456778999999996 9999999999876
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
....+++|||+.+++|.+++... .+++..++.++.|++.||.|||++||+|+||+|+||+++ ..+.++|+|||
T Consensus 74 -~~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~----~~~~~~l~dfg 146 (277)
T cd06917 74 -GPRLWIIMEYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT----NTGNVKLCDFG 146 (277)
T ss_pred -CCEEEEEEecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc----CCCCEEEccCC
Confidence 56889999999999999988653 588999999999999999999999999999999999998 67799999999
Q ss_pred CcccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1031 LSRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1031 LAkl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
++....... ......|+..|+|||.+.+. ..++.++|+|||||++|+|++|..||...........+... ..+.++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~-~~~~~~~ 224 (277)
T cd06917 147 VAALLNQNSSKRSTFVGTPYWMAPEVITEG-KYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKS-KPPRLED 224 (277)
T ss_pred ceeecCCCccccccccCCcceeCHHHhccC-CccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccC-CCCCCCc
Confidence 987543322 22335689999999998643 34688999999999999999999999877655444333222 2333443
Q ss_pred -CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1110 -RCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1110 -~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
..+.++.++|.+||+.||.+||++.+++++.+..
T Consensus 225 ~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~ 259 (277)
T cd06917 225 NGYSKLLREFVAACLDEEPKERLSAEELLKSKWIK 259 (277)
T ss_pred ccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhh
Confidence 3788999999999999999999999999987763
No 279
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=1.2e-35 Score=302.05 Aligned_cols=251 Identities=27% Similarity=0.498 Sum_probs=213.0
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||.|+||.||++.+. +..+|+|++...... ......+.+|+++++.++|||++++++.+.. ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~--~~ 72 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS------EKEREDALNEVKILKKLNHPNIIKYYESFEE--KG 72 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC------hHHHHHHHHHHHHHHhcCCCChhheEEEEec--CC
Confidence 5889999999999999999985 778999998764221 2234667899999999999999999999887 47
Q ss_pred cEEEEEEeecCCcchhhhccc---cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 954 TMATVTEYMVNGSLRHVLARK---DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~---gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
..+++|||+++++|.+++.+. +..+++..++.++.+++.||.|||++|++|+||+|+|||++ ..+.++|+|||
T Consensus 73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~----~~~~~~l~d~~ 148 (258)
T cd08215 73 KLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT----SNGLVKLGDFG 148 (258)
T ss_pred EEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc----CCCcEEECCcc
Confidence 899999999999999988764 36789999999999999999999999999999999999998 67789999999
Q ss_pred CcccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1031 LSRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1031 LAkl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
++....... ......|++.|+|||.+.+. .++.++|+||||+++|+|++|+.||................ ...++.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~ 225 (258)
T cd08215 149 ISKVLSSTVDLAKTVVGTPYYLSPELCQNK--PYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQ-YPPIPS 225 (258)
T ss_pred ceeecccCcceecceeeeecccChhHhccC--CCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCC-CCCCCC
Confidence 987654432 23345689999999998754 47889999999999999999999998877666666555443 445667
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.++..+.++|.+||..+|.+||++.+++++.+
T Consensus 226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~ 257 (258)
T cd08215 226 QYSSELRNLVSSLLQKDPEERPSIAQILQSPF 257 (258)
T ss_pred CCCHHHHHHHHHHcCCChhhCcCHHHHhcCCC
Confidence 88999999999999999999999999998753
No 280
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=9.5e-36 Score=326.09 Aligned_cols=254 Identities=24% Similarity=0.316 Sum_probs=202.0
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++++.||+|+||.||++++ .++.||||++.+... .......+.+|+.+++.++||||+++++++....
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ------NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK 88 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc------ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC
Confidence 46899999999999999999987 577899998865311 1112356778999999999999999999886432
Q ss_pred ----CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 ----GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ----~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
....|+||||+.+ +|.+.+... +++..+..++.|++.||+|||++||+||||||+|||++ .++.+||+
T Consensus 89 ~~~~~~~~~lv~e~~~~-~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~----~~~~~kL~ 160 (353)
T cd07850 89 SLEEFQDVYLVMELMDA-NLCQVIQMD---LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK----SDCTLKIL 160 (353)
T ss_pred CccccCcEEEEEeccCC-CHHHHHhhc---CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC----CCCCEEEc
Confidence 2357999999965 787777533 78889999999999999999999999999999999998 67789999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC---
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR--- 1104 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr--- 1104 (1157)
|||++.............++..|+|||.+.+. .++.++|||||||++|+|++|+.||...+....+..+......
T Consensus 161 Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T cd07850 161 DFGLARTAGTSFMMTPYVVTRYYRAPEVILGM--GYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSD 238 (353)
T ss_pred cCccceeCCCCCCCCCCcccccccCHHHHhCC--CCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99999876554444456789999999999754 5789999999999999999999999876644333322110000
Q ss_pred -----------------C---------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1105 -----------------P---------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1105 -----------------p---------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
+ ..+...++++++||.+||+.||++|||+.+++++.|.-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~ 315 (353)
T cd07850 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYIN 315 (353)
T ss_pred HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHh
Confidence 0 00113456789999999999999999999999987753
No 281
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8.2e-36 Score=312.51 Aligned_cols=252 Identities=23% Similarity=0.348 Sum_probs=200.3
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++++.||.|+||.||+|++ .+..||||+++...... .....+.+|++++++++||||+++++++.+ ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~ 72 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE------GVPSTAIREISLLKELNHPNIVKLLDVIHT--EN 72 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccccc------ccchHHHHHHHHHHhcCCCCCcchhhhccc--CC
Confidence 488999999999999999988 46789999887542111 123567889999999999999999999876 56
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++||||+. ++|..++... ...+++..++.++.|++.||+|||+++++||||||+||+++ .++.+||+|||++
T Consensus 73 ~~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~----~~~~~~l~dfg~~ 147 (284)
T cd07860 73 KLYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN----TEGAIKLADFGLA 147 (284)
T ss_pred cEEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC----CCCCEEEeeccch
Confidence 8999999996 5788777543 35689999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC------
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP------ 1105 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp------ 1105 (1157)
....... ......++..|+|||.+.+. ..++.++|+|||||++|+|++|+.||...........+......+
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd07860 148 RAFGVPVRTYTHEVVTLWYRAPEILLGC-KYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 226 (284)
T ss_pred hhcccCccccccccccccccCCeEEecC-CCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhh
Confidence 7543222 22334578899999988754 345889999999999999999999998766544333332110000
Q ss_pred ---------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1106 ---------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1106 ---------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+...+++++++||.+||+.||.+||++++++++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~ 283 (284)
T cd07860 227 GVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPF 283 (284)
T ss_pred hhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCC
Confidence 012246788999999999999999999999998754
No 282
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=4.2e-36 Score=314.31 Aligned_cols=253 Identities=26% Similarity=0.353 Sum_probs=202.1
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++++.||+|+||.||+|.++ ++.||+|++.+.... ....+.+.+|+++++.++||||+++++++.. .
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 72 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD------KMVKKIAMREIRMLKQLRHENLVNLIEVFRR--K 72 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc------chhhHHHHHHHHHHHhcCCcchhhHHHhccc--C
Confidence 37899999999999999999984 678999987654211 1223567789999999999999999999876 6
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+.+++|..+.... ..+++..++.++.|++.||.|||+++|+|+||+|+||+++ .++.++|+|||++
T Consensus 73 ~~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~----~~~~~~l~dfg~~ 147 (286)
T cd07846 73 KRLYLVFEFVDHTVLDDLEKYP-NGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS----QSGVVKLCDFGFA 147 (286)
T ss_pred CeEEEEEecCCccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC----CCCcEEEEeeeee
Confidence 6899999999999888776543 3488999999999999999999999999999999999998 6779999999998
Q ss_pred ccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc----------
Q 001103 1033 RIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN---------- 1101 (1157)
Q Consensus 1033 kl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~---------- 1101 (1157)
...... .......++..|+|||++.+. ..++.++||||||+++|+|++|++||......+....+...
T Consensus 148 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (286)
T cd07846 148 RTLAAPGEVYTDYVATRWYRAPELLVGD-TKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQE 226 (286)
T ss_pred eeccCCccccCcccceeeccCcHHhccc-cccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHH
Confidence 764332 222345688999999998753 34678999999999999999999999765543332222110
Q ss_pred ----------CCCC---------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1102 ----------TLRP---------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1102 ----------~lrp---------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
...+ .....++..+.+||.+||..+|.+||++.+++++.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 285 (286)
T cd07846 227 IFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEF 285 (286)
T ss_pred HhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCC
Confidence 0000 012356788999999999999999999999998743
No 283
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.2e-35 Score=311.57 Aligned_cols=252 Identities=25% Similarity=0.356 Sum_probs=195.7
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|.+++.||+|+||.||+|.. .+..||+|++....... ....+.+|+.+++.++|+||+++++++.. .
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-------~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--~ 75 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG-------VPFTAIREASLLKGLKHANIVLLHDIIHT--K 75 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC-------CcHHHHHHHHHHHhcCCCCEeEEEEEEec--C
Confidence 5799999999999999999987 47789999987542111 12345689999999999999999999887 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...|+||||+. ++|...+......+++..+..++.|++.||.|||++||+||||||+|||++ ..+.+||+|||++
T Consensus 76 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~----~~~~~~l~Dfg~~ 150 (291)
T cd07870 76 ETLTFVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS----YLGELKLADFGLA 150 (291)
T ss_pred CeEEEEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc----CCCcEEEeccccc
Confidence 68899999996 577666655445578888899999999999999999999999999999998 6778999999998
Q ss_pred ccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-HHHHHhhh----------
Q 001103 1033 RIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-AIIGGILS---------- 1100 (1157)
Q Consensus 1033 kl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-eil~~Il~---------- 1100 (1157)
+..... .......+++.|+|||.+.+. ..++.++|+|||||++|+|++|+.||...... +.+..+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (291)
T cd07870 151 RAKSIPSQTYSSEVVTLWYRPPDVLLGA-TDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTW 229 (291)
T ss_pred cccCCCCCCCCCccccccccCCceeecC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhh
Confidence 754322 122334579999999998753 24678999999999999999999999765432 11111110
Q ss_pred -----------cCCCCCCC---------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1101 -----------NTLRPQIP---------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1101 -----------~~lrpeip---------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.......+ ...++.+.++|.+||..||.+|||+.+++.+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~ 290 (291)
T cd07870 230 PGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPY 290 (291)
T ss_pred hhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCC
Confidence 00000000 012568899999999999999999999998754
No 284
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.2e-36 Score=348.55 Aligned_cols=259 Identities=22% Similarity=0.333 Sum_probs=211.4
Q ss_pred cccccCCCeeEEEEecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeee
Q 001103 869 LQIIKDSDLEELQELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGV 946 (1157)
Q Consensus 869 i~~I~~sdYeILrkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygv 946 (1157)
+..++...|+++++||+|+.+.||++... .+.||+|++.... .....+.-+.+|+.+|.+|+ |.+||+||++
T Consensus 355 ~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~------~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DY 428 (677)
T KOG0596|consen 355 IIKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE------ADNQTLDGYRNEIALLNKLKGHDKIIQLYDY 428 (677)
T ss_pred eEEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh------cCHHHHHHHHHHHHHHHHhcCCceEEEEeee
Confidence 44577889999999999999999999874 4558888765431 22345688999999999995 9999999999
Q ss_pred eecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 947 VPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 947 f~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
-.. ++++||||||= ..+|..+|++....++...++.+..||+.+++++|+.||||.||||.|+|+ -.|.+||
T Consensus 429 Ev~--d~~lYmvmE~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-----VkG~LKL 500 (677)
T KOG0596|consen 429 EVT--DGYLYMVMECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-----VKGRLKL 500 (677)
T ss_pred ecc--CceEEEEeecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-----EeeeEEe
Confidence 777 78999999975 459999998877666656888899999999999999999999999999999 4689999
Q ss_pred EecCCcccccCCcc---cCCCCCCCcccCcccccCCC---------CCCCchhHHHHHHHHHHHHHcCCCCCCCCC-hhH
Q 001103 1027 GDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSN---------NRVSEKVDVYSFGIAMWEIITGEEPYANMH-CGA 1093 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~---------~~yS~KSDIWSLGVILYELLTGk~PF~g~~-~ee 1093 (1157)
+|||+|.......+ ..+.+||+.||+||.+.... -+.+.++||||||||||+|+.|++||.... ...
T Consensus 501 IDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~a 580 (677)
T KOG0596|consen 501 IDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIA 580 (677)
T ss_pred eeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHH
Confidence 99999986554433 45678999999999986422 226789999999999999999999998765 345
Q ss_pred HHHHhhhcCCCCCCCCCCcH-HHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1094 IIGGILSNTLRPQIPERCDP-EWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1094 il~~Il~~~lrpeip~~iSp-eLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+.+|.+.....++|.--+. ++.++++.||++||.+||++.+||++..
T Consensus 581 Kl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqhpF 629 (677)
T KOG0596|consen 581 KLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQHPF 629 (677)
T ss_pred HHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcCcc
Confidence 55566555444455544333 3999999999999999999999999754
No 285
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.2e-35 Score=312.28 Aligned_cols=249 Identities=22% Similarity=0.313 Sum_probs=201.9
Q ss_pred ecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEE
Q 001103 883 LGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTE 960 (1157)
Q Consensus 883 LGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVME 960 (1157)
||+|+||+||++.+ +|+.||+|++.+..... ......+.+|+++++.++||||+++++.+.. .+..|+|||
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~~~lv~e 73 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKK-----RKGEQMALNEKKILEKVSSRFIVSLAYAFET--KDDLCLVMT 73 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhh-----hhhhHHHHHHHHHHHhCCCCCEeeeeeEEec--CCeEEEEEe
Confidence 69999999999987 47789999987642211 1223556789999999999999999999877 568999999
Q ss_pred eecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCc
Q 001103 961 YMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL 1039 (1157)
Q Consensus 961 YmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~ 1039 (1157)
|+++++|.+++.+.. ..+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||++.......
T Consensus 74 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~----~~~~~~l~dfg~~~~~~~~~ 149 (277)
T cd05577 74 LMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD----DHGNVRISDLGLAVELKGGK 149 (277)
T ss_pred cCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC----CCCCEEEccCcchhhhccCC
Confidence 999999998886544 3589999999999999999999999999999999999998 67789999999987654433
Q ss_pred ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh--cCCCCCCCCCCcHHHHH
Q 001103 1040 VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS--NTLRPQIPERCDPEWRK 1117 (1157)
Q Consensus 1040 ~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~--~~lrpeip~~iSpeLrd 1117 (1157)
......++..|+|||.+.+. .++.++|+|||||++|+|++|+.||...........+.. .......+..+++.+++
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~--~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGE--VYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAKD 227 (277)
T ss_pred ccccccCCCCcCCHHHhcCC--CCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCCHHHHH
Confidence 33445688999999998754 478899999999999999999999976543211111111 12233456678999999
Q ss_pred HHHHHhccCCCCCC-----CHHHHHHHHHHHH
Q 001103 1118 LMEECWSFNPAARP-----SFTEITNRLRVMS 1144 (1157)
Q Consensus 1118 LIkrCLqkDPskRP-----SaeELLe~Lr~Lk 1144 (1157)
+|.+||+.+|.+|| ++.+++++.+...
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~ 259 (277)
T cd05577 228 LCEALLQKDPEKRLGCRGGSADEVREHPLFKD 259 (277)
T ss_pred HHHHHccCChhHccCCCcccHHHHHhChhhhc
Confidence 99999999999999 8888999877644
No 286
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.5e-35 Score=309.92 Aligned_cols=251 Identities=28% Similarity=0.408 Sum_probs=201.3
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++++.||.|++|.||+|++. |..||||+++...... ....+.+|+.+++.++||||+++++.+.. .+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~-------~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--~~ 71 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG-------TPSTAIREISLMKELKHENIVRLHDVIHT--EN 71 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccccc-------chHHHHHHHHHHHhhcCCCEeeeeeeEee--CC
Confidence 5889999999999999999984 7789999987642211 12456789999999999999999999987 56
Q ss_pred cEEEEEEeecCCcchhhhcccc--ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 954 TMATVTEYMVNGSLRHVLARKD--RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~g--r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
..++||||+.+ +|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+|||+
T Consensus 72 ~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~----~~~~~~l~d~g~ 146 (284)
T cd07836 72 KLMLVFEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN----KRGELKLADFGL 146 (284)
T ss_pred cEEEEEecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC----CCCcEEEeecch
Confidence 78999999986 8888776543 4589999999999999999999999999999999999998 677899999999
Q ss_pred cccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC-------
Q 001103 1032 SRIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL------- 1103 (1157)
Q Consensus 1032 Akl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l------- 1103 (1157)
+....... ......++..|++||++.+. ..++.++|+|||||++|+|++|+.||......+....+.....
T Consensus 147 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (284)
T cd07836 147 ARAFGIPVNTFSNEVVTLWYRAPDVLLGS-RTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTW 225 (284)
T ss_pred hhhhcCCccccccccccccccChHHhcCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhH
Confidence 87543321 22234578899999998754 3468899999999999999999999987765554444322110
Q ss_pred ---------CCC-----------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1104 ---------RPQ-----------IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1104 ---------rpe-----------ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
... +...+++.++++|.+||+.||.+||++.+++++.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~ 283 (284)
T cd07836 226 PGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283 (284)
T ss_pred HHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCC
Confidence 000 11235778999999999999999999999998643
No 287
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-36 Score=352.43 Aligned_cols=256 Identities=27% Similarity=0.451 Sum_probs=226.4
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
...|.+.+.||+|.|++|.++++ +++.||||.+.+.... ...+.++.+|+++|+.|+|||||++|.+...
T Consensus 55 vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln------~~~~~k~~rev~imk~l~HPnIvkl~~v~~t-- 126 (596)
T KOG0586|consen 55 VGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLN------PSKRQKLGREVDIMKSLNHPNIVKLFSVIET-- 126 (596)
T ss_pred ccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccC------hHHHHHHHHHHHHHHhcCCcceeeeeeeeee--
Confidence 35789999999999999999988 6889999999886322 2234568999999999999999999999987
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
...+|+||||+.+|.+.+++.+.++ +.+..+..++.|++.|++|||+++|+|||||++|||++ .+.++||+|||+
T Consensus 127 ~~~lylV~eya~~ge~~~yl~~~gr-~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~----~~mnikIaDfgf 201 (596)
T KOG0586|consen 127 EATLYLVMEYASGGELFDYLVKHGR-MKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD----ENMNIKIADFGF 201 (596)
T ss_pred cceeEEEEEeccCchhHHHHHhccc-chhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc----cccceeeecccc
Confidence 5689999999999999999998876 45588999999999999999999999999999999999 778899999999
Q ss_pred cccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1032 SRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1032 Akl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
+..........++||++.|+|||+++|..+ -+.++|+||||++||.|+.|.+||.+..........+.+.++ ++.-+
T Consensus 202 S~~~~~~~~lqt~cgsppyAaPEl~~g~~y-~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~r--Ip~~m 278 (596)
T KOG0586|consen 202 STFFDYGLMLQTFCGSPPYAAPELFNGKKY-DGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYR--IPFYM 278 (596)
T ss_pred ceeecccccccccCCCCCccChHhhcCccc-CCcceehhhhhhhheeeeecccccCCcccccccchheeeeec--cccee
Confidence 998887778888999999999999998754 478999999999999999999999988877777777666665 55567
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
+.+..++|+++|-++|.+|++.+++.++-|....
T Consensus 279 s~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 279 SCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred echhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 8899999999999999999999999998776544
No 288
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=2.4e-35 Score=317.95 Aligned_cols=256 Identities=26% Similarity=0.429 Sum_probs=211.0
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..|+..+.||+|+||.||++++ .+..+|+|++...... .......+.+|+++++.++|||++++++++.+ .
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~ 97 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ-----SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR--E 97 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC-----chHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--C
Confidence 3477889999999999999987 4677999988754211 12234678899999999999999999999887 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+.+ +|.+++......+++..+..++.|++.||.|||+++|+||||+|+||+++ .++.+||+|||++
T Consensus 98 ~~~~lv~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~----~~~~~kl~dfg~~ 172 (317)
T cd06635 98 HTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT----EPGQVKLADFGSA 172 (317)
T ss_pred CeEEEEEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC----CCCCEEEecCCCc
Confidence 578999999975 77777766566689999999999999999999999999999999999998 6778999999998
Q ss_pred ccccCCcccCCCCCCCcccCcccccC-CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNG-SNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G-~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
...... ....|+..|+|||.+.. ....++.++|+|||||++|+|++|+.||...........+............+
T Consensus 173 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (317)
T cd06635 173 SIASPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEW 249 (317)
T ss_pred cccCCc---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCCCCCccc
Confidence 654322 23568999999998742 12357889999999999999999999998877666666665555444445567
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
++.+++||.+||+.+|.+||++.+++++++.+..
T Consensus 250 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 250 SDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred cHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 8899999999999999999999999998776543
No 289
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.5e-35 Score=303.35 Aligned_cols=249 Identities=24% Similarity=0.457 Sum_probs=209.6
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||+|+||.||++++ .+..+|+|++...... ......+.+|+++++.++||||+++++++.. ..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~ 72 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS------QKEREDAVNEIRILASVNHPNIISYKEAFLD--GN 72 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc------HHHHHHHHHHHHHHHhCCCCCchhhhhhhcc--CC
Confidence 588999999999999999987 4667999998764221 1224567789999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccc---cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 954 TMATVTEYMVNGSLRHVLARK---DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~---gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
..++||||+++++|..++.+. ...+++..++.++.|++.||.|||++|++|+||+|+||+++ ..+.+||+|||
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~----~~~~~kl~d~g 148 (256)
T cd08530 73 KLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV----ANDLVKIGDLG 148 (256)
T ss_pred EEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe----cCCcEEEeecc
Confidence 899999999999999888652 34588999999999999999999999999999999999998 56789999999
Q ss_pred CcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCC
Q 001103 1031 LSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPER 1110 (1157)
Q Consensus 1031 LAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~ 1110 (1157)
++...... ......+++.|++||.+.+. .++.++|+||||+++|+|++|+.||...........+..... +.++..
T Consensus 149 ~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~--~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~ 224 (256)
T cd08530 149 ISKVLKKN-MAKTQIGTPHYMAPEVWKGR--PYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY-PPIPPI 224 (256)
T ss_pred chhhhccC-CcccccCCccccCHHHHCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC-CCCchh
Confidence 99765544 33345689999999999754 568899999999999999999999998877666555554433 345567
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
++.+++++|.+||+.+|.+||++.++++++
T Consensus 225 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p 254 (256)
T cd08530 225 YSQDLQNFIRSMLQVKPKLRPNCDKILASP 254 (256)
T ss_pred hCHHHHHHHHHHcCCCcccCCCHHHHhcCC
Confidence 889999999999999999999999999864
No 290
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.2e-35 Score=310.59 Aligned_cols=252 Identities=25% Similarity=0.338 Sum_probs=202.3
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||+|+||.||+|.++ +..||||+++.... .......+.+|++++++++|+||+++++++.. .+
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~ 73 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED------DEDVKKTALREVKVLRQLRHENIVNLKEAFRR--KG 73 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc------cccchhHHHHHHHHHHhcCCCCeeehhheEEE--CC
Confidence 6899999999999999999884 66799998875421 11234678899999999999999999999987 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
..+++|||+.++.+..++. ....+++..++.++.|++.||.|||+++|+||||||+||+++ ..+.+||+|||++.
T Consensus 74 ~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~----~~~~~kl~d~g~~~ 148 (288)
T cd07833 74 RLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS----ESGVLKLCDFGFAR 148 (288)
T ss_pred EEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC----CCCCEEEEeeeccc
Confidence 8999999999877665554 344589999999999999999999999999999999999998 67899999999987
Q ss_pred cccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc----------
Q 001103 1034 IKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN---------- 1101 (1157)
Q Consensus 1034 l~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~---------- 1101 (1157)
...... ......++..|+|||++.+. ..++.++|+||||+++|+|++|++||........+..+...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (288)
T cd07833 149 ALRARPASPLTDYVATRWYRAPELLVGD-TNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQE 227 (288)
T ss_pred ccCCCccccccCcccccCCcCCchhcCC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhh
Confidence 654432 33346688999999998754 25789999999999999999999999876544332222110
Q ss_pred ------CC--------------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1102 ------TL--------------RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1102 ------~l--------------rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+ ....+..+++++++||++||..+|.+||++++++++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~ 287 (288)
T cd07833 228 LFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPY 287 (288)
T ss_pred hcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCC
Confidence 00 00123345889999999999999999999999987643
No 291
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=3.3e-35 Score=308.82 Aligned_cols=252 Identities=26% Similarity=0.440 Sum_probs=209.5
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
-|++++.||+|+||.||++.+ .+..||||++.... .......+.+|+.++++++||||+++++.+.. ..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~-------~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~ 75 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE-------AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--DT 75 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc-------chHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe--CC
Confidence 467889999999999999987 46779999876431 11224678899999999999999999999987 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
..++||||+.+++|..++.. ..+++..++.++.|++.+|.|||++|++|+||||+||+++ .++.++|+|||++.
T Consensus 76 ~~~lv~e~~~~~~l~~~i~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~----~~~~~~l~dfg~~~ 149 (277)
T cd06641 76 KLWIIMEYLGGGSALDLLEP--GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS----EHGEVKLADFGVAG 149 (277)
T ss_pred eEEEEEEeCCCCcHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC----CCCCEEEeecccce
Confidence 89999999999999988864 3478999999999999999999999999999999999998 66789999999987
Q ss_pred cccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCc
Q 001103 1034 IKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1034 l~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iS 1112 (1157)
...... ......++..|+|||.+.+. .++.++|+|||||++|+|++|..||...........+. ....+.++..++
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~ 226 (277)
T cd06641 150 QLTDTQIKRNTFVGTPFWMAPEVIKQS--AYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIP-KNNPPTLEGNYS 226 (277)
T ss_pred ecccchhhhccccCCccccChhhhccC--CCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHh-cCCCCCCCcccC
Confidence 543322 22335689999999998753 56889999999999999999999998766555555443 333455667789
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
.++.++|.+||+.+|.+||++.+++++.+....
T Consensus 227 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~ 259 (277)
T cd06641 227 KPLKEFVEACLNKEPSFRPTAKELLKHKFIVRF 259 (277)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHhCHHHhhh
Confidence 999999999999999999999999998766544
No 292
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=2.4e-35 Score=309.04 Aligned_cols=246 Identities=23% Similarity=0.468 Sum_probs=192.1
Q ss_pred EecccCcEEEEEEEEC-Cce---EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEE
Q 001103 882 ELGSGTFGTVYRGKWR-GTD---IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~k-Gt~---VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyL 957 (1157)
+||+|+||.||++++. +.. +++|.++... .......+.+|+.+++.++||||+++++.+.. ....|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--~~~~~l 72 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-------SSKEQNEFLQQGDPYRILQHPNILQCLGQCVE--AIPYLL 72 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-------ChHHHHHHHHHHHHHhccCCcchhheEEEecC--CCccEE
Confidence 5999999999999763 333 4455544321 11224678899999999999999999999887 557899
Q ss_pred EEEeecCCcchhhhcccc---ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 958 VTEYMVNGSLRHVLARKD---RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~g---r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
||||+++|+|.+++.+.. ..+++..++.++.|++.||+|||+++|+||||||+|||++ .++.+||+|||++..
T Consensus 73 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~----~~~~~~l~Dfg~~~~ 148 (268)
T cd05086 73 VFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT----SDLTVKVGDYGIGPS 148 (268)
T ss_pred EEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc----CCccEEecccccccc
Confidence 999999999999987532 3466777889999999999999999999999999999998 677899999999864
Q ss_pred ccCC---cccCCCCCCCcccCcccccCC-----CCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcC---
Q 001103 1035 KCNT---LVSGGVRGTLPWMAPELLNGS-----NNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNT--- 1102 (1157)
Q Consensus 1035 ~~~~---~~sts~~GTp~YmAPEVL~G~-----~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~--- 1102 (1157)
.... .......++..|+|||++... ...++.++|||||||++|||++ |..||......+.+..+....
T Consensus 149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~ 228 (268)
T cd05086 149 RYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVK 228 (268)
T ss_pred cCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccc
Confidence 2211 112345688999999998532 1245788999999999999997 678998776655555543332
Q ss_pred -CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 -LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 -lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.++.++...++.+.+++..|| .+|.+||+++++++.|.
T Consensus 229 ~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 229 LFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred cCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 334555668899999999999 67999999999988773
No 293
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.9e-35 Score=311.17 Aligned_cols=256 Identities=24% Similarity=0.317 Sum_probs=201.0
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
++|++.+.||+|++|+||+++++ ++.||+|.+...... +.....+.+|++++++++||||+++++++.. .
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 73 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED------EGVPSTAIREISLLKEMQHGNIVRLQDVVHS--E 73 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc------ccchHHHHHHHHHHHhccCCCEeeEEEEEec--C
Confidence 47999999999999999999884 677999988654211 1123567789999999999999999999987 5
Q ss_pred CcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 953 GTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
...|+||||+.+ +|...+... ...+++..++.++.||+.||+|||+++|+||||||+|||++. ....+||+|||+
T Consensus 74 ~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~---~~~~~kl~dfg~ 149 (294)
T PLN00009 74 KRLYLVFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR---RTNALKLADFGL 149 (294)
T ss_pred CeEEEEEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC---CCCEEEEccccc
Confidence 689999999965 777666443 333678888999999999999999999999999999999972 345799999999
Q ss_pred cccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC-------
Q 001103 1032 SRIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL------- 1103 (1157)
Q Consensus 1032 Akl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l------- 1103 (1157)
+...... .......+++.|+|||.+.+. ..++.++|||||||++|+|++|+.||........+..+.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 228 (294)
T PLN00009 150 ARAFGIPVRTFTHEVVTLWYRAPEILLGS-RHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW 228 (294)
T ss_pred ccccCCCccccccCceeecccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence 9754322 222334678999999998753 3578899999999999999999999987665544443321100
Q ss_pred ----------------CC----CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1104 ----------------RP----QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1104 ----------------rp----eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
+. .....+++++.++|.+||+.+|.+||++.+++++.+.-
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~ 288 (294)
T PLN00009 229 PGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFK 288 (294)
T ss_pred cccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHh
Confidence 00 01234678899999999999999999999999986653
No 294
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=2.3e-35 Score=310.70 Aligned_cols=256 Identities=25% Similarity=0.302 Sum_probs=198.7
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGP 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~ 951 (1157)
++|++.+.||+|+||.||++++ .++.||||+++..... ......+.+|+.+++.+. ||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~------~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE------EGIPPTALREISLLQMLSESIYIVRLLDVEHVEE 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc------cCCchHHHHHHHHHHHccCCCCccceeeeEeecC
Confidence 3689999999999999999998 4678999987654211 112356778999999995 699999999886632
Q ss_pred C---CcEEEEEEeecCCcchhhhccc----cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 952 G---GTMATVTEYMVNGSLRHVLARK----DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 952 ~---~~LyLVMEYmeGGSL~dlLkr~----gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
. ..+|++|||+.+ +|.+++... ...+++..++.++.||+.||.|||+++|+||||||+|||++. ..+.+
T Consensus 75 ~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~---~~~~~ 150 (295)
T cd07837 75 KNGKPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK---QKGLL 150 (295)
T ss_pred CCCCceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec---CCCeE
Confidence 2 248999999986 787777542 245899999999999999999999999999999999999982 26789
Q ss_pred EEEecCCcccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC
Q 001103 1025 KVGDFGLSRIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL 1103 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l 1103 (1157)
||+|||++...... .......+++.|+|||++.+. ..++.++|+||||+++|+|++|..||.+.........+.....
T Consensus 151 kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~ 229 (295)
T cd07837 151 KIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGS-THYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLG 229 (295)
T ss_pred EEeecccceecCCCccccCCcccccCCCChHHhhCC-CCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 99999998754322 122233578899999988653 3468899999999999999999999987665544433322100
Q ss_pred ----------------------CC----CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1104 ----------------------RP----QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1104 ----------------------rp----eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+ .....+++++.+||.+||..||.+||++++++.+.|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~ 293 (295)
T cd07837 230 TPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293 (295)
T ss_pred CCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCC
Confidence 00 011347888999999999999999999999998754
No 295
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=8.1e-36 Score=313.80 Aligned_cols=256 Identities=25% Similarity=0.412 Sum_probs=199.8
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGP 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~ 951 (1157)
.+|+..+.||+|+||.||++++. +..+|+|.+...... .....+.+|+.++.++. ||||+++++++..
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-------~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-- 74 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-------KEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-- 74 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-------HHHHHHHHHHHHHHHhcCCCCEeeeeeEEec--
Confidence 46677788999999999999884 677999988754211 22456788999999996 9999999999877
Q ss_pred CCcEEEEEEeecCCcchhhh---c-cccccccHHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeeccCCCCCCeEEE
Q 001103 952 GGTMATVTEYMVNGSLRHVL---A-RKDRILDRRKKLMLMMDAAFGMEYLHMK-NIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlL---k-r~gr~L~e~qVlkIa~QLa~ALeYLHSk-GIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
....+++|||+.. +|.++. . .....+++..+..++.|++.||+|||+. +|+||||||+|||++ ..+.+||
T Consensus 75 ~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~----~~~~~kl 149 (288)
T cd06616 75 EGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD----RNGNIKL 149 (288)
T ss_pred CCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc----cCCcEEE
Confidence 4578899999865 544332 2 2235689999999999999999999975 999999999999998 6778999
Q ss_pred EecCCcccccCCcccCCCCCCCcccCcccccCCC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-HHHHHhhhcC--
Q 001103 1027 GDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSN-NRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-AIIGGILSNT-- 1102 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~-~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-eil~~Il~~~-- 1102 (1157)
+|||++.............|+..|+|||++.+.. ..++.++|||||||++|+|++|++||...... ..+..+....
T Consensus 150 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 229 (288)
T cd06616 150 CDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPP 229 (288)
T ss_pred eecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCC
Confidence 9999987654443334456899999999987531 35788999999999999999999999865421 2222222111
Q ss_pred -CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1103 -LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1103 -lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.....+..++.++.+||.+||+.+|.+|||+++++++.+.-.
T Consensus 230 ~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 272 (288)
T cd06616 230 ILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKD 272 (288)
T ss_pred cCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhc
Confidence 111223357899999999999999999999999999877644
No 296
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=375.11 Aligned_cols=263 Identities=24% Similarity=0.326 Sum_probs=228.1
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+..+||++++.||+|+||.|.+++++ ++.||+|++.+..+..+. ....|+.|..+|..-+.+=|++++..|++
T Consensus 72 l~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~-----~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 72 LKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRA-----ETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred CCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhch-----hHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 56789999999999999999999985 456999999986554432 24678899999999999999999999998
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
..++|+|||||+||+|..+|.+.+ .+++..+++|+.+|+.||.-||+.|+|||||||+||||+ ..|++||+||
T Consensus 147 --~~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld----~~GHikLADF 219 (1317)
T KOG0612|consen 147 --ERYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLD----KSGHIKLADF 219 (1317)
T ss_pred --ccceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEec----ccCcEeeccc
Confidence 679999999999999999999888 799999999999999999999999999999999999999 8899999999
Q ss_pred CCcccccCC--cccCCCCCCCcccCcccccC--CC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC
Q 001103 1030 GLSRIKCNT--LVSGGVRGTLPWMAPELLNG--SN-NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR 1104 (1157)
Q Consensus 1030 GLAkl~~~~--~~sts~~GTp~YmAPEVL~G--~~-~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr 1104 (1157)
|-+-..... ..+...+|||.|.+||+++. .+ ..|+..+|||||||++|||+.|..||......+.+..|+...-.
T Consensus 220 GsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~ 299 (1317)
T KOG0612|consen 220 GSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKES 299 (1317)
T ss_pred hhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhh
Confidence 987655432 34556789999999999853 22 67899999999999999999999999999999999999887555
Q ss_pred CCCC--CCCcHHHHHHHHHHhccCCCCCCC---HHHHHHHHHHHHHHH
Q 001103 1105 PQIP--ERCDPEWRKLMEECWSFNPAARPS---FTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1105 peip--~~iSpeLrdLIkrCLqkDPskRPS---aeELLe~Lr~Lk~aL 1147 (1157)
..+| ..+|+++++||.+++. +|..|-. ++++.+|+++--..+
T Consensus 300 l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 300 LSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred cCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhCccccCCCh
Confidence 5666 5689999999999997 6888876 999999887654433
No 297
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.5e-35 Score=306.55 Aligned_cols=253 Identities=26% Similarity=0.390 Sum_probs=203.9
Q ss_pred eeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
|++++.||.|+||.||++++. +..+|+|++.... . .......+.+|+++++.++|||++++++++.....+.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 74 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN--E----KEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGS 74 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc--c----cccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCc
Confidence 678999999999999999985 5789999998652 1 1112356778999999999999999999998743478
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
.++||||+.+ +|..++.+....+++..++.++.|++.||+|||++|++|+||||+|||++ +++.+||+|||++..
T Consensus 75 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~----~~~~~~l~d~g~~~~ 149 (287)
T cd07840 75 IYMVFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN----NDGVLKLADFGLARP 149 (287)
T ss_pred EEEEeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc----CCCCEEEccccceee
Confidence 9999999975 88888876656789999999999999999999999999999999999998 678999999999876
Q ss_pred ccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC--------
Q 001103 1035 KCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR-------- 1104 (1157)
Q Consensus 1035 ~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr-------- 1104 (1157)
..... ......++..|+|||.+.+. ..++.++||||||+++|+|++|+.||........+..+......
T Consensus 150 ~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (287)
T cd07840 150 YTKRNSADYTNRVITLWYRPPELLLGA-TRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPG 228 (287)
T ss_pred ccCCCcccccccccccccCCceeeEcc-ccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccc
Confidence 54432 23334578899999987653 34688999999999999999999999877655444443321000
Q ss_pred ---------------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1105 ---------------------PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1105 ---------------------peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
..+...+++.+.++|.+||+.+|.+||++.+++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~ 286 (287)
T cd07840 229 VSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEY 286 (287)
T ss_pred cccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcC
Confidence 0011113788999999999999999999999998754
No 298
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=2.6e-35 Score=311.07 Aligned_cols=255 Identities=25% Similarity=0.330 Sum_probs=198.1
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP- 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~- 951 (1157)
.+|++++.||+|+||.||+++.+ +..||||++....... .....+.+|++++++++||||+++++++....
T Consensus 12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~------~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 85 (310)
T cd07865 12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE------GFPITALREIKILQLLKHENVVNLIEICRTKAT 85 (310)
T ss_pred hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC------CchhHHHHHHHHHHhCCCCCccceEEEEecccc
Confidence 57999999999999999999984 6789999887542111 11234567999999999999999999876532
Q ss_pred -----CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 952 -----GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 952 -----~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
....++||||+.+ +|.+++......+++..++.++.|++.||+|||++||+|+||||+|||++ ..+.+||
T Consensus 86 ~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~----~~~~~kl 160 (310)
T cd07865 86 PYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT----KDGILKL 160 (310)
T ss_pred cccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC----CCCcEEE
Confidence 2357999999965 78877766555689999999999999999999999999999999999998 7789999
Q ss_pred EecCCcccccCCc-----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh-
Q 001103 1027 GDFGLSRIKCNTL-----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS- 1100 (1157)
Q Consensus 1027 iDFGLAkl~~~~~-----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~- 1100 (1157)
+|||++....... ......++..|+|||.+.+. ..++.++|+||||+++|+|++|+.||...........+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~ 239 (310)
T cd07865 161 ADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE-RDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQL 239 (310)
T ss_pred CcCCCcccccCCcccCCCCccCcccCccccCcHHhcCC-cccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 9999987543221 12234678899999988653 3467899999999999999999999987664433222211
Q ss_pred -cCCCCC---------------C-------------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1101 -NTLRPQ---------------I-------------PERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1101 -~~lrpe---------------i-------------p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+..++. + +...+..+++||.+||..||.+|||+++++++.|
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~ 309 (310)
T cd07865 240 CGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDF 309 (310)
T ss_pred hCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCC
Confidence 000000 0 1113567889999999999999999999998764
No 299
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=1.1e-35 Score=304.20 Aligned_cols=246 Identities=28% Similarity=0.419 Sum_probs=203.8
Q ss_pred ecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEE
Q 001103 883 LGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTE 960 (1157)
Q Consensus 883 LGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVME 960 (1157)
||+|+||.||++++. +..+|+|++...... .......+.+|++++++++||||+++++.+.. ....|++||
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~-----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--~~~~~lv~e 73 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMI-----RKNQVDQVLTERDILSQAQSPYVVKLYYSFQG--KKNLYLVME 73 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhh-----hhhHHHHHHHHHHHHHhCCCcchhHHHHheec--CcEEEEEEe
Confidence 689999999999985 788999998764221 12335678899999999999999999998876 668999999
Q ss_pred eecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCc-
Q 001103 961 YMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL- 1039 (1157)
Q Consensus 961 YmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~- 1039 (1157)
|+.+++|.+++.+.+ .+++..++.++.|++.||.|||+++|+|+||+|+|||++ .++.++|+|||++.......
T Consensus 74 ~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~----~~~~~~l~dfg~~~~~~~~~~ 148 (265)
T cd05579 74 YLPGGDLASLLENVG-SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID----SNGHLKLTDFGLSKVGLVRRQ 148 (265)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc----CCCCEEEEecccchhcccCcc
Confidence 999999999997654 589999999999999999999999999999999999998 67799999999987543321
Q ss_pred --------ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1040 --------VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1040 --------~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...........+............+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (265)
T cd05579 149 INLNDDEKEDKRIVGTPDYIAPEVILGQ--GHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEV 226 (265)
T ss_pred cccccccccccCcccCccccCHHHhcCC--CCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccC
Confidence 22335688899999998754 46889999999999999999999999888777776666544332222234
Q ss_pred cHHHHHHHHHHhccCCCCCCCH---HHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSF---TEITNRLRV 1142 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSa---eELLe~Lr~ 1142 (1157)
+..+.+||.+||+.+|.+|||+ .+++++.+.
T Consensus 227 ~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~ 260 (265)
T cd05579 227 SDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFF 260 (265)
T ss_pred CHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccc
Confidence 8999999999999999999999 777776554
No 300
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=2.1e-35 Score=303.03 Aligned_cols=252 Identities=23% Similarity=0.456 Sum_probs=207.0
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||+|+||.||++.++ |..+|+|.+....... ...+.+.+|+++++.++|+||+++++.+.. ..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~------~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~--~~ 72 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV------KEKEASKKEVILLAKMKHPNIVTFFASFQE--NG 72 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc------hhhHHHHHHHHHHHhCCCCChhhhhheecc--CC
Confidence 4789999999999999999884 6779999987642211 113567789999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+++|||+.+++|.+++.+. ...+++..++.++.|++.||.|||+++|+|+||||+|||++. ....+||+|||.+
T Consensus 73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~---~~~~~~l~d~~~~ 149 (257)
T cd08225 73 RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK---NGMVAKLGDFGIA 149 (257)
T ss_pred eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC---CCCeEEecccccc
Confidence 899999999999999988653 335789999999999999999999999999999999999982 2346799999998
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
....... ......|++.|+|||.+.+. .++.++|+||||+++|+|++|..||........+..+..... ......+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~ape~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~ 226 (257)
T cd08225 150 RQLNDSMELAYTCVGTPYYLSPEICQNR--PYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYF-APISPNF 226 (257)
T ss_pred hhccCCcccccccCCCccccCHHHHcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccC-CCCCCCC
Confidence 7544332 22234589999999998743 578899999999999999999999987776666655554433 3445567
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+.+++++|.+||..+|++|||+.+++++.|
T Consensus 227 ~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~ 256 (257)
T cd08225 227 SRDLRSLISQLFKVSPRDRPSITSILKRPF 256 (257)
T ss_pred CHHHHHHHHHHhccChhhCcCHHHHhhCCC
Confidence 889999999999999999999999998754
No 301
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.4e-35 Score=339.48 Aligned_cols=247 Identities=24% Similarity=0.317 Sum_probs=195.0
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
....|.+.+.||+|+||.||++++. ++.||||.... ..+.+|+++|++|+|||||++++++..
T Consensus 167 ~~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~--------------~~~~~E~~iL~~L~HpnIv~l~~~~~~- 231 (461)
T PHA03211 167 AGLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY--------------ASSVHEARLLRRLSHPAVLALLDVRVV- 231 (461)
T ss_pred ccCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc--------------cCHHHHHHHHHHCCCCCCCcEEEEEEE-
Confidence 3457999999999999999999984 56799995332 234689999999999999999999877
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
.+..++|||++. ++|..++....+.+++..++.++.||+.||.|||++||+||||||+|||++ ..+.+||+|||
T Consensus 232 -~~~~~lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~----~~~~vkL~DFG 305 (461)
T PHA03211 232 -GGLTCLVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN----GPEDICLGDFG 305 (461)
T ss_pred -CCEEEEEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC----CCCCEEEcccC
Confidence 567899999995 688888876556799999999999999999999999999999999999998 66789999999
Q ss_pred CcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-------hHHHHHhhh
Q 001103 1031 LSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC-------GAIIGGILS 1100 (1157)
Q Consensus 1031 LAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~-------eeil~~Il~ 1100 (1157)
+++...... ......||+.|+|||++.+. .++.++|||||||+||||++|..|+..... ...+..++.
T Consensus 306 la~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~--~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~ 383 (461)
T PHA03211 306 AACFARGSWSTPFHYGIAGTVDTNAPEVLAGD--PYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIR 383 (461)
T ss_pred CceecccccccccccccCCCcCCcCHHHHcCC--CCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHH
Confidence 997543221 22346799999999999864 578999999999999999998765432110 111111111
Q ss_pred c-CCC-CCCC-------------------------------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1101 N-TLR-PQIP-------------------------------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1101 ~-~lr-peip-------------------------------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
. ... ..++ ...++.+.+||.+||+.||.+|||+.++|++.++
T Consensus 384 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f 458 (461)
T PHA03211 384 QAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLF 458 (461)
T ss_pred hhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCccc
Confidence 1 000 0000 1245688999999999999999999999999775
No 302
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=3.2e-35 Score=305.70 Aligned_cols=254 Identities=31% Similarity=0.540 Sum_probs=202.6
Q ss_pred eeEEEEecccCcEEEEEEEEC-----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 877 LEELQELGSGTFGTVYRGKWR-----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k-----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
|.+.+.||+|+||.||+|.++ +..||||+++.... .....+.+.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 74 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF------SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSR 74 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC------ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 567789999999999999863 46799999875421 1122466889999999999999999999876532
Q ss_pred C----CcEEEEEEeecCCcchhhhccc-----cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCC
Q 001103 952 G----GTMATVTEYMVNGSLRHVLARK-----DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRP 1022 (1157)
Q Consensus 952 ~----~~LyLVMEYmeGGSL~dlLkr~-----gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g 1022 (1157)
. ...+++++|+.+|+|..++... ...+++..++.++.|++.||+|||+++|+||||||+|||++ ..+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~----~~~ 150 (273)
T cd05074 75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN----ENM 150 (273)
T ss_pred CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc----CCC
Confidence 2 2347899999999998776421 12478889999999999999999999999999999999998 677
Q ss_pred eEEEEecCCcccccCCc---ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHh
Q 001103 1023 ICKVGDFGLSRIKCNTL---VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGI 1098 (1157)
Q Consensus 1023 ~VKLiDFGLAkl~~~~~---~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~I 1098 (1157)
.+||+|||++....... ......+++.|++||.+.+. .++.++|||||||++|+|++ |++||...........+
T Consensus 151 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~ 228 (273)
T cd05074 151 TVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADN--VYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYL 228 (273)
T ss_pred CEEECcccccccccCCcceecCCCccCchhhcCHhHHhcC--ccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHH
Confidence 89999999987543222 11223456789999998754 56889999999999999999 99999887766655555
Q ss_pred hhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1099 LSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1099 l~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.... ....+...++.+.+++.+||+.+|.+|||+.++++.|..+
T Consensus 229 ~~~~-~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 229 IKGN-RLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred HcCC-cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 4332 2334556789999999999999999999999999999764
No 303
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=1.5e-35 Score=314.89 Aligned_cols=260 Identities=23% Similarity=0.391 Sum_probs=205.9
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeee
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVV 947 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf 947 (1157)
.+...+|++.+.||+|+||.||+++++ ++.||||++++... ......+.+|+.++.++ .||||+++++++
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~-------~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~ 83 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN-------KEENKRILMDLDVVLKSHDCPYIVKCYGYF 83 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC-------hHHHHHHHHHHHHHHhccCCCchHhhheee
Confidence 345678999999999999999999996 78899999875421 11134556677766666 599999999999
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCCCCCCeEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
.+ ....|++|||+.+ +|.+++......+++..+..++.|++.||.|||+ .+|+||||+|+|||++ .++.+||
T Consensus 84 ~~--~~~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~----~~~~~kL 156 (296)
T cd06618 84 IT--DSDVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD----ASGNVKL 156 (296)
T ss_pred ec--CCeEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc----CCCCEEE
Confidence 87 5689999999854 7777776655678999999999999999999997 5999999999999998 6779999
Q ss_pred EecCCcccccCCcccCCCCCCCcccCcccccCCC--CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-hHHHHHhhhcCC
Q 001103 1027 GDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSN--NRVSEKVDVYSFGIAMWEIITGEEPYANMHC-GAIIGGILSNTL 1103 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~--~~yS~KSDIWSLGVILYELLTGk~PF~g~~~-eeil~~Il~~~l 1103 (1157)
+|||++.............++..|+|||.+.+.. ..++.++|+||||+++|+|++|+.||..... .+.+..+.....
T Consensus 157 ~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 236 (296)
T cd06618 157 CDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP 236 (296)
T ss_pred CccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCC
Confidence 9999987654433333445888999999987542 3478899999999999999999999976433 233444433321
Q ss_pred -CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1104 -RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1104 -rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.......++.++++||.+||..||.+||++++++++.+...
T Consensus 237 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 278 (296)
T cd06618 237 PSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRR 278 (296)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhc
Confidence 11222347889999999999999999999999999987554
No 304
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.2e-37 Score=339.68 Aligned_cols=244 Identities=24% Similarity=0.428 Sum_probs=213.1
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECCce--EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRGTD--IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVP 948 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kGt~--VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~ 948 (1157)
+...+|.++..||+|+||.|.++..+|+. ||||++++........ ++--..|.++|... +-|.+++++.+|+
T Consensus 346 i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDD-----vectm~EKrvLAL~~kppFL~qlHScFQ 420 (683)
T KOG0696|consen 346 IKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDD-----VECTMVEKRVLALPGKPPFLVQLHSCFQ 420 (683)
T ss_pred eeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCc-----ccceehhhhheecCCCCchHHHHHHHhh
Confidence 45578999999999999999999998876 9999999886654432 22234566777655 5789999999998
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
. ..++|+||||+.||+|...+++-++ +.+..+..++.+|+.||-|||++|||+||||.+|||++ .++++||+|
T Consensus 421 T--mDRLyFVMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd----~eGHiKi~D 493 (683)
T KOG0696|consen 421 T--MDRLYFVMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD----SEGHIKIAD 493 (683)
T ss_pred h--hhheeeEEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEec----cCCceEeee
Confidence 8 6789999999999999998877665 77888888999999999999999999999999999999 888999999
Q ss_pred cCCccccc-CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCC
Q 001103 1029 FGLSRIKC-NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1029 FGLAkl~~-~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpei 1107 (1157)
||+++... ...++.++||||.|+|||++. +++|+..+||||+||+|||||.|++||.+.+.+++++.|++.... +
T Consensus 494 FGmcKEni~~~~TTkTFCGTPdYiAPEIi~--YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvs--y 569 (683)
T KOG0696|consen 494 FGMCKENIFDGVTTKTFCGTPDYIAPEIIA--YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVS--Y 569 (683)
T ss_pred cccccccccCCcceeeecCCCcccccceEE--ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCc--C
Confidence 99998643 445667799999999999997 457899999999999999999999999999999999999987664 6
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCC
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARP 1131 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRP 1131 (1157)
|..+|.++.++.+..|.+.|.+|-
T Consensus 570 PKslSkEAv~ickg~ltK~P~kRL 593 (683)
T KOG0696|consen 570 PKSLSKEAVAICKGLLTKHPGKRL 593 (683)
T ss_pred cccccHHHHHHHHHHhhcCCcccc
Confidence 888999999999999999999994
No 305
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=2.8e-35 Score=312.09 Aligned_cols=248 Identities=21% Similarity=0.351 Sum_probs=194.5
Q ss_pred EecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHH---HHHHhCCCCceeEEeeeeecCCCCcEE
Q 001103 882 ELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREA---HIISNLHHPNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEI---kILK~L~HPNIVkLygvf~de~~~~Ly 956 (1157)
.||+|+||.||++++ .++.+|+|.+.+........ . ..+.+|. .++...+||+|+.+++.+.. .+..+
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~ 73 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--E---TLALNERIMLSLVSTGDCPFIVCMTYAFHT--PDKLC 73 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH--H---HHHHHHHHHHHHHhhCCCCcEeEEEEEEec--CCeEE
Confidence 389999999999988 46789999987653221111 1 1222333 34445589999999999887 55789
Q ss_pred EEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc
Q 001103 957 TVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~ 1036 (1157)
+||||+.+++|.+++...+ .+++..+..++.|++.||.|||+++|+||||||+|||++ .++.++|+|||++....
T Consensus 74 lv~e~~~~~~L~~~i~~~~-~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~----~~~~~~l~dfg~~~~~~ 148 (279)
T cd05633 74 FILDLMNGGDLHYHLSQHG-VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD----EHGHVRISDLGLACDFS 148 (279)
T ss_pred EEEecCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC----CCCCEEEccCCcceecc
Confidence 9999999999998886544 489999999999999999999999999999999999998 67789999999986543
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh--HHHHHhhhcCCCCCCCCCCcHH
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG--AIIGGILSNTLRPQIPERCDPE 1114 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e--eil~~Il~~~lrpeip~~iSpe 1114 (1157)
... .....||..|+|||.+... ..++.++|+|||||++|+|++|..||...... ..+... .......++..++++
T Consensus 149 ~~~-~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 225 (279)
T cd05633 149 KKK-PHASVGTHGYMAPEVLQKG-TAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRM-TLTVNVELPDSFSPE 225 (279)
T ss_pred ccC-ccCcCCCcCccCHHHhcCC-CCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHH-hhcCCcCCccccCHH
Confidence 322 2235699999999998632 34788999999999999999999999754322 122211 223344567778999
Q ss_pred HHHHHHHHhccCCCCCC-----CHHHHHHHHHHHH
Q 001103 1115 WRKLMEECWSFNPAARP-----SFTEITNRLRVMS 1144 (1157)
Q Consensus 1115 LrdLIkrCLqkDPskRP-----SaeELLe~Lr~Lk 1144 (1157)
++++|.+||..||.+|| |+++++++.++-.
T Consensus 226 ~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 226 LKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred HHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 99999999999999999 6999999877644
No 306
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1e-34 Score=296.17 Aligned_cols=248 Identities=29% Similarity=0.536 Sum_probs=209.1
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|++.+.||+|++|.||++++ .+..||+|.+...... +.....+.+|++++++++|||++++++++.+ ..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~ 72 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK------EEALKSIMQEIDLLKNLKHPNIVKYIGSIET--SD 72 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC------HHHHHHHHHHHHHHHhCCCCCccEEEEEEEe--CC
Confidence 578899999999999999987 4667999998765321 2335678999999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
..+++|||+++++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++ ..+.++|+|||++.
T Consensus 73 ~~~~v~e~~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~----~~~~~~l~d~~~~~ 147 (254)
T cd06627 73 SLYIILEYAENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT----KDGVVKLADFGVAT 147 (254)
T ss_pred EEEEEEecCCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC----CCCCEEEeccccce
Confidence 899999999999999998765 4589999999999999999999999999999999999998 57799999999987
Q ss_pred cccCCcc-cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCc
Q 001103 1034 IKCNTLV-SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCD 1112 (1157)
Q Consensus 1034 l~~~~~~-sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iS 1112 (1157)
....... .....++..|+|||.+.+. .++.++|+|+||+++|+|++|+.||...........+.. ...+.++..++
T Consensus 148 ~~~~~~~~~~~~~~~~~y~~pe~~~~~--~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~ 224 (254)
T cd06627 148 KLNDVSKDDASVVGTPYWMAPEVIEMS--GASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQ-DDHPPLPEGIS 224 (254)
T ss_pred ecCCCcccccccccchhhcCHhhhcCC--CCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc-cCCCCCCCCCC
Confidence 6543322 2335689999999998754 378899999999999999999999987665554444432 33345677789
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
+.++++|.+||..+|++||++.+++.+
T Consensus 225 ~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 225 PELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred HHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 999999999999999999999999875
No 307
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=5.2e-35 Score=302.70 Aligned_cols=245 Identities=28% Similarity=0.411 Sum_probs=197.1
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHH-HHhCCCCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHI-ISNLHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkI-LK~L~HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+||.||+|.+ .++.||||++.+..... ......+..|..+ ...++||||+++++++.. ....|+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~-----~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~~l 74 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIA-----KNQVTNVKAERAIMMIQGESPYVAKLYYSFQS--KDYLYL 74 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhH-----HHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc--CCeEEE
Confidence 5699999999999988 46789999987542111 1112333445444 445689999999999977 568999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN 1037 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~ 1037 (1157)
+|||+.+++|..++...+ .+++..+..++.|++.||.|||+.+|+||||+|+|||++ ..+.+||+|||++.....
T Consensus 75 v~e~~~~~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~----~~~~~~l~dfg~~~~~~~ 149 (260)
T cd05611 75 VMEYLNGGDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID----QTGHLKLTDFGLSRNGLE 149 (260)
T ss_pred EEeccCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC----CCCcEEEeecccceeccc
Confidence 999999999999986543 588999999999999999999999999999999999998 677899999999875433
Q ss_pred CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC--CCCCCCCCcHHH
Q 001103 1038 TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL--RPQIPERCDPEW 1115 (1157)
Q Consensus 1038 ~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l--rpeip~~iSpeL 1115 (1157)
.....|+..|+|||.+.+. .++.++||||||+++|+|++|..||...........+..... .......+++.+
T Consensus 150 ---~~~~~~~~~y~~pe~~~~~--~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T cd05611 150 ---NKKFVGTPDYLAPETILGV--GDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEA 224 (260)
T ss_pred ---cccCCCCcCccChhhhcCC--CCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHH
Confidence 2235688999999998764 378999999999999999999999988777666665544332 233445678999
Q ss_pred HHHHHHHhccCCCCCCCH---HHHHHHHHH
Q 001103 1116 RKLMEECWSFNPAARPSF---TEITNRLRV 1142 (1157)
Q Consensus 1116 rdLIkrCLqkDPskRPSa---eELLe~Lr~ 1142 (1157)
.++|.+||+.+|++||++ .+++++.+.
T Consensus 225 ~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~ 254 (260)
T cd05611 225 VDLINRLLCMDPAKRLGANGYQEIKSHPFF 254 (260)
T ss_pred HHHHHHHccCCHHHccCCCcHHHHHcChHh
Confidence 999999999999999954 688777665
No 308
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-35 Score=354.04 Aligned_cols=258 Identities=22% Similarity=0.314 Sum_probs=210.9
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC-C-ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeee-e
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR-G-TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGV-V 947 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k-G-t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygv-f 947 (1157)
+...++++.+.|.+|+|+.||+++.. + ..||+|++-.. .+...+.+.+|+++||.|. |+|||.+++. .
T Consensus 34 Vg~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--------de~~L~~v~~EI~~MK~L~gh~nIV~yidss~ 105 (738)
T KOG1989|consen 34 VGSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--------DEEALNAVKREIDIMKLLSGHKNIVSYIDSSA 105 (738)
T ss_pred ECCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--------CHHHHHHHHHHHHHHHHhcCCCceeeEecccc
Confidence 45567889999999999999999984 3 78999998754 2345688899999999997 9999999993 3
Q ss_pred ecC--CC--CcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCC--ceeccCCccceeeccCCCC
Q 001103 948 PNG--PG--GTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKN--IVHFDLKCDNLLVNLRDPQ 1020 (1157)
Q Consensus 948 ~de--~~--~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkG--IIHRDLKPENILLd~dd~e 1020 (1157)
... .. -.++|+||||.||.|.++|... ...|++..+++|+.|+++|+.+||..+ |||||||-|||||. .
T Consensus 106 ~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls----~ 181 (738)
T KOG1989|consen 106 INRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS----A 181 (738)
T ss_pred ccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc----C
Confidence 221 11 2468999999999999999742 344999999999999999999999998 99999999999999 7
Q ss_pred CCeEEEEecCCcccccCCccc-C---------CCCCCCcccCcccccC-CCCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 001103 1021 RPICKVGDFGLSRIKCNTLVS-G---------GVRGTLPWMAPELLNG-SNNRVSEKVDVYSFGIAMWEIITGEEPYANM 1089 (1157)
Q Consensus 1021 ~g~VKLiDFGLAkl~~~~~~s-t---------s~~GTp~YmAPEVL~G-~~~~yS~KSDIWSLGVILYELLTGk~PF~g~ 1089 (1157)
+++.||||||-+......... . ...-|+.|+|||++.- ....++.|+|||+|||+||-|+...+||+..
T Consensus 182 ~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~s 261 (738)
T KOG1989|consen 182 DGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEES 261 (738)
T ss_pred CCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcC
Confidence 789999999988743322211 0 1237999999998742 2346899999999999999999999999865
Q ss_pred ChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1090 HCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1090 ~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
.. .+|+...+..+-....+..|++||+.||+.||.+||++-+++..+..+..
T Consensus 262 g~----laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 262 GK----LAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELAN 313 (738)
T ss_pred cc----eeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhc
Confidence 33 34566666655556789999999999999999999999999999888764
No 309
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=3.9e-35 Score=307.23 Aligned_cols=251 Identities=25% Similarity=0.338 Sum_probs=199.8
Q ss_pred eeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
|++++.||.|++|.||++.+ .|..||+|++...... +.....+.+|+++++.++||||+++++++.+ ...
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~--~~~ 72 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED------EGVPSTAIREISLLKELNHPNIVRLLDVVHS--ENK 72 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc------ccchhHHHHHHHHHHhcCCCCccCHhheecc--CCe
Confidence 57789999999999999987 4788999998764211 1123456789999999999999999999877 578
Q ss_pred EEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 955 MATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.|++|||+. ++|.+++.... ..+++..++.++.|++.||+|||+++++||||+|+|||++ .++.++|+|||++.
T Consensus 73 ~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~----~~~~~~l~df~~~~ 147 (283)
T cd07835 73 LYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID----REGALKLADFGLAR 147 (283)
T ss_pred EEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc----CCCcEEEeeccccc
Confidence 999999995 58988886543 4589999999999999999999999999999999999998 67799999999987
Q ss_pred cccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC---------
Q 001103 1034 IKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL--------- 1103 (1157)
Q Consensus 1034 l~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l--------- 1103 (1157)
...... ......++..|+|||++.+. ..++.++|+||||+++|+|++|++||........+..+.....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd07835 148 AFGVPVRTYTHEVVTLWYRAPEILLGS-RQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPG 226 (283)
T ss_pred ccCCCccccCccccccCCCCCceeecC-cccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhh
Confidence 543222 22233578899999988653 2468899999999999999999999987665443333221100
Q ss_pred ------------------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1104 ------------------RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1104 ------------------rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.......+++.+.++|.+||+.||.+||++++++++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~ 282 (283)
T cd07835 227 VTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPY 282 (283)
T ss_pred hhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCC
Confidence 00112446788999999999999999999999998754
No 310
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-37 Score=351.95 Aligned_cols=255 Identities=24% Similarity=0.389 Sum_probs=219.4
Q ss_pred CCeeEEEEecccCcEEEEEEEECCce--EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWRGTD--IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~kGt~--VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
+-|+|++.||.|+||.||++..+.+. .|-|+|... .+..++.++-|+.||..++||+||+||+.|.. .
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk--------seEELEDylVEIeILa~CdHP~ivkLl~ayy~--e 101 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK--------SEEELEDYLVEIEILAECDHPVIVKLLSAYYF--E 101 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc--------chhHHhhhhhhhhhhhcCCChHHHHHHHHHhc--c
Confidence 45789999999999999999886443 566776643 12335778889999999999999999998877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
+.++|+.|||.||-+..++-.-++.|.+.++..+++|++.||.|||+++|||||||..|||++ .+|.++|+|||.+
T Consensus 102 nkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T----ldGdirLADFGVS 177 (1187)
T KOG0579|consen 102 NKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT----LDGDIRLADFGVS 177 (1187)
T ss_pred CceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE----ecCcEeeeccccc
Confidence 689999999999999999988899999999999999999999999999999999999999999 7789999999987
Q ss_pred ccc-cCCcccCCCCCCCcccCcccccC---CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC-CCCC
Q 001103 1033 RIK-CNTLVSGGVRGTLPWMAPELLNG---SNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL-RPQI 1107 (1157)
Q Consensus 1033 kl~-~~~~~sts~~GTp~YmAPEVL~G---~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l-rpei 1107 (1157)
... ..-....+|.|||.|||||+++. .+.+|+.++||||||++|.||..+.+|........++-.|..... ...-
T Consensus 178 AKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlq 257 (1187)
T KOG0579|consen 178 AKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQ 257 (1187)
T ss_pred ccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccC
Confidence 543 23344567899999999999865 356799999999999999999999999998888887777755433 3345
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
|..++..|.+|+++||.+||..||++.+|++|.+.-
T Consensus 258 PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~ 293 (1187)
T KOG0579|consen 258 PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQ 293 (1187)
T ss_pred cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccc
Confidence 778999999999999999999999999999987654
No 311
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.8e-35 Score=309.96 Aligned_cols=256 Identities=27% Similarity=0.362 Sum_probs=199.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++.+.||+|+||.||+++++ +..+|||++........ ....+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG------FPITALREIKILKKLKHPNVVPLIDMAVERP 80 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC------cchhHHHHHHHHHhcCCCCccchhhheeccc
Confidence 368999999999999999999984 67799999876432111 1134568999999999999999999875533
Q ss_pred ------CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEE
Q 001103 952 ------GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 952 ------~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
...+++||||+.+ +|...+......+++..++.++.|++.||.|||++||+||||||+|||++ .++.+|
T Consensus 81 ~~~~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~----~~~~~~ 155 (311)
T cd07866 81 DKSKRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILID----NQGILK 155 (311)
T ss_pred ccccccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC----CCCCEE
Confidence 2367999999975 67666655555699999999999999999999999999999999999998 778999
Q ss_pred EEecCCcccccCCc------------ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhH
Q 001103 1026 VGDFGLSRIKCNTL------------VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGA 1093 (1157)
Q Consensus 1026 LiDFGLAkl~~~~~------------~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~ee 1093 (1157)
|+|||++....... ......+++.|+|||.+.+. ..++.++|||||||++|+|++|++||.+.....
T Consensus 156 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~ 234 (311)
T cd07866 156 IADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGE-RRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID 234 (311)
T ss_pred ECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCC-CccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 99999987533211 11234578899999988653 347889999999999999999999998766554
Q ss_pred HHHHhhhcCCC---------------------CCC-------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1094 IIGGILSNTLR---------------------PQI-------PERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1094 il~~Il~~~lr---------------------pei-------p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
....+...... ... ...+++.+.+||.+||+.||.+|||+.+++.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~ 310 (311)
T cd07866 235 QLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPY 310 (311)
T ss_pred HHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCC
Confidence 44433221000 000 0234567899999999999999999999998754
No 312
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=4.8e-35 Score=309.28 Aligned_cols=256 Identities=25% Similarity=0.332 Sum_probs=201.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++.+.||+|+||.||+|.++ ++.||||+++...... .....+.+|++++++++||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~------~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~ 79 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE------GFPITAIREIKILRQLNHRNIVNLKEIVTDKQ 79 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc------CchHHHHHHHHHHHhCCCCCeeeeeheecCcc
Confidence 468999999999999999999984 6789999987642111 11245678999999999999999999987643
Q ss_pred --------CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCe
Q 001103 952 --------GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPI 1023 (1157)
Q Consensus 952 --------~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~ 1023 (1157)
.+.+++||||+.+ ++...+......+++..++.++.|++.||.|||+.||+||||||+||+++ .++.
T Consensus 80 ~~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~----~~~~ 154 (302)
T cd07864 80 DALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN----NKGQ 154 (302)
T ss_pred hhhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC----CCCc
Confidence 3478999999986 67676665555689999999999999999999999999999999999998 7789
Q ss_pred EEEEecCCcccccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc
Q 001103 1024 CKVGDFGLSRIKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN 1101 (1157)
Q Consensus 1024 VKLiDFGLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~ 1101 (1157)
+||+|||++....... ......++..|+|||.+.+. ..++.++|||||||++|+|++|++||........+..+...
T Consensus 155 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~ 233 (302)
T cd07864 155 IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGE-ERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRL 233 (302)
T ss_pred EEeCcccccccccCCcccccccceeccCccChHHhcCC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHH
Confidence 9999999987543322 22233568889999988643 34688999999999999999999999876554433333221
Q ss_pred ---CCCC-------------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1102 ---TLRP-------------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1102 ---~lrp-------------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.... .....++..+.+||.+||+.||.+||++++++++.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~ 301 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPW 301 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 0000 012246889999999999999999999999998643
No 313
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=5.4e-35 Score=307.90 Aligned_cols=253 Identities=29% Similarity=0.500 Sum_probs=211.3
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..|++.+.||+|+||.||++.++ +..+|+|++..... ....+.+|+++++.++|+||+++++.+.. .
T Consensus 19 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~ 87 (286)
T cd06614 19 ELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---------NKELIINEILIMKDCKHPNIVDYYDSYLV--G 87 (286)
T ss_pred ccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---------hHHHHHHHHHHHHHCCCCCeeEEEEEEEE--C
Confidence 46888899999999999999985 77899999875421 24567889999999999999999999887 4
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...+++|||+++++|.+++......+++..++.++.|++.||.|||++||+|+||||+||+++ .++.++|+|||++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~----~~~~~~l~d~~~~ 163 (286)
T cd06614 88 DELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS----KDGSVKLADFGFA 163 (286)
T ss_pred CEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc----CCCCEEECccchh
Confidence 689999999999999999987654689999999999999999999999999999999999998 6778999999987
Q ss_pred ccccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC-CCCCC
Q 001103 1033 RIKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP-QIPER 1110 (1157)
Q Consensus 1033 kl~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp-eip~~ 1110 (1157)
....... ......++..|++||.+.+. .++.++|+||||+++|+|++|+.||...........+....... ..+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (286)
T cd06614 164 AQLTKEKSKRNSVVGTPYWMAPEVIKRK--DYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEK 241 (286)
T ss_pred hhhccchhhhccccCCcccCCHhHhcCC--CCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhh
Confidence 6433221 22334588999999998754 57899999999999999999999998877665555544333322 22334
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
++..+++||.+||+.+|.+||++.+++++.+...
T Consensus 242 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~ 275 (286)
T cd06614 242 WSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKK 275 (286)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhhChHhhc
Confidence 7889999999999999999999999999877665
No 314
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.9e-35 Score=304.95 Aligned_cols=251 Identities=25% Similarity=0.425 Sum_probs=209.8
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGP 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~ 951 (1157)
.+|++.+.||+|+||.||+++. .+..||+|++.+..... +.....+.+|.++++++. ||||+++++++..
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~-----~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~-- 73 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIK-----EKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQD-- 73 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccc-----hHHHHHHHHHHHHHHhcccCCCchhHHHHhcC--
Confidence 3789999999999999999988 57789999987642211 122366788999999998 9999999999877
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
....+++|||+.+++|.+++.+.. .+++..++.++.|++.||.|||++|++|+||||+||+++ .++.++|+|||+
T Consensus 74 ~~~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~----~~~~~~l~df~~ 148 (280)
T cd05581 74 EENLYFVLEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD----KDMHIKITDFGT 148 (280)
T ss_pred CceEEEEEcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC----CCCCEEecCCcc
Confidence 568999999999999999997654 589999999999999999999999999999999999998 677899999999
Q ss_pred cccccCCc---------------------ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 001103 1032 SRIKCNTL---------------------VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH 1090 (1157)
Q Consensus 1032 Akl~~~~~---------------------~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~ 1090 (1157)
+....... ....+.++..|+|||++.+. .++.++|+||||+++++|++|+.||....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~--~~~~~~Di~slG~~l~~l~~g~~p~~~~~ 226 (280)
T cd05581 149 AKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK--PAGKSSDLWALGCIIYQMLTGKPPFRGSN 226 (280)
T ss_pred ccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCC--CCChhhhHHHHHHHHHHHHhCCCCCCCcc
Confidence 87543221 12234688999999998753 47889999999999999999999999877
Q ss_pred hhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH----HHHHHHHH
Q 001103 1091 CGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSF----TEITNRLR 1141 (1157)
Q Consensus 1091 ~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSa----eELLe~Lr 1141 (1157)
....+..+.. ....++..+++.+.+||.+||+.+|.+||++ ++++++.+
T Consensus 227 ~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~ 279 (280)
T cd05581 227 EYLTFQKILK--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPF 279 (280)
T ss_pred HHHHHHHHHh--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCC
Confidence 6555555543 2335667789999999999999999999999 89988754
No 315
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=4.3e-35 Score=309.28 Aligned_cols=256 Identities=22% Similarity=0.371 Sum_probs=204.7
Q ss_pred CeeEEEEecccCcEEEEEEEE-----CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec
Q 001103 876 DLEELQELGSGTFGTVYRGKW-----RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPN 949 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~-----kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~d 949 (1157)
.|++.+.||+|+||.||+++. +|..||+|+++...... .....+.+.+|+++++.+ +|++|+++++.+..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~----~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~ 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQ----KAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhh----cchHHHHHHHHHHHHHhcccCCChhceeeEeec
Confidence 478899999999999999987 46779999987642211 112235677899999999 69999999999877
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
...+|+||||+++++|.+++... ..+++..+..++.|++.||.|||++|++||||||+|||++ .++.+||+||
T Consensus 77 --~~~~~lv~e~~~~~~L~~~l~~~-~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~----~~~~~kl~df 149 (290)
T cd05613 77 --DTKLHLILDYINGGELFTHLSQR-ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD----SNGHVVLTDF 149 (290)
T ss_pred --CCeEEEEEecCCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC----CCCCEEEeeC
Confidence 56889999999999999998754 3588889999999999999999999999999999999998 6779999999
Q ss_pred CCcccccCC--cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----hHHHHHhhhcCC
Q 001103 1030 GLSRIKCNT--LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC----GAIIGGILSNTL 1103 (1157)
Q Consensus 1030 GLAkl~~~~--~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~----eeil~~Il~~~l 1103 (1157)
|++...... .......|+..|+|||.+.+....++.++||||||+++|+|++|..||..... ......+.. .
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~--~ 227 (290)
T cd05613 150 GLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILK--S 227 (290)
T ss_pred ccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhc--c
Confidence 998754332 12224568999999999875444567889999999999999999999974322 222222222 2
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHHHHHHH
Q 001103 1104 RPQIPERCDPEWRKLMEECWSFNPAARP-----SFTEITNRLRVMS 1144 (1157)
Q Consensus 1104 rpeip~~iSpeLrdLIkrCLqkDPskRP-----SaeELLe~Lr~Lk 1144 (1157)
.+.++..+++.+.+|+.+||+.||.+|| ++++++++.+...
T Consensus 228 ~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~ 273 (290)
T cd05613 228 EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQK 273 (290)
T ss_pred CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCccccc
Confidence 2345667899999999999999999997 8899998755433
No 316
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-35 Score=360.36 Aligned_cols=266 Identities=33% Similarity=0.605 Sum_probs=227.3
Q ss_pred cccccCCCeeEEEEecccCcEEEEEEEEC---Cc----eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCcee
Q 001103 869 LQIIKDSDLEELQELGSGTFGTVYRGKWR---GT----DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVV 941 (1157)
Q Consensus 869 i~~I~~sdYeILrkLGsGsFGtVYlAr~k---Gt----~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIV 941 (1157)
+..+.....+..+.||+|+||.||.|... |. .||||.+++.. .+.....|.+|..+|++++|||||
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-------~~~~~~~Fl~Ea~~m~~f~HpNiv 758 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-------SEQEVSDFLKEALLMSKFDHPNIV 758 (1025)
T ss_pred cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-------CHHHHHHHHHHHHHHhcCCCccee
Confidence 34466778889999999999999999873 33 38888887642 123367899999999999999999
Q ss_pred EEeeeeecCCCCcEEEEEEeecCCcchhhhccc------cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeec
Q 001103 942 AFYGVVPNGPGGTMATVTEYMVNGSLRHVLARK------DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVN 1015 (1157)
Q Consensus 942 kLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~------gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd 1015 (1157)
+++|++.+ .+..+|++|||+||+|..+|++. ...+.....+.++.|+++|++||+++++|||||-..|+|++
T Consensus 759 ~liGv~l~--~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~ 836 (1025)
T KOG1095|consen 759 SLIGVCLD--SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD 836 (1025)
T ss_pred eEEEeecC--CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec
Confidence 99999988 56788999999999999999876 56799999999999999999999999999999999999999
Q ss_pred cCCCCCCeEEEEecCCcccccCCc--ccCCC-CCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCCh
Q 001103 1016 LRDPQRPICKVGDFGLSRIKCNTL--VSGGV-RGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHC 1091 (1157)
Q Consensus 1016 ~dd~e~g~VKLiDFGLAkl~~~~~--~sts~-~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~ 1091 (1157)
....|||+|||+|+-..... ..... .-...|||||.++. +.++.|+|||||||+|||+++ |..||.+..+
T Consensus 837 ----~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d--~iFtskSDvWsFGVllWEifslG~~PY~~~~n 910 (1025)
T KOG1095|consen 837 ----ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKD--GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSN 910 (1025)
T ss_pred ----ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhh--cccccccchhhhHHHHHHHHhCCCCCCCCcch
Confidence 66899999999998332221 22222 23467999999984 578999999999999999999 9999999999
Q ss_pred hHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHhhc
Q 001103 1092 GAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQTK 1150 (1157)
Q Consensus 1092 eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLesk 1150 (1157)
.+++...+.+. +.+.|..|+..+.+||..||+.+|++||++..|++.+..+.......
T Consensus 911 ~~v~~~~~~gg-RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~~~ 968 (1025)
T KOG1095|consen 911 FEVLLDVLEGG-RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAALGT 968 (1025)
T ss_pred HHHHHHHHhCC-ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhccC
Confidence 99888777666 77889999999999999999999999999999999888877765443
No 317
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.2e-35 Score=316.75 Aligned_cols=256 Identities=22% Similarity=0.369 Sum_probs=198.7
Q ss_pred EEeccc--CcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEE
Q 001103 881 QELGSG--TFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 881 rkLGsG--sFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~Ly 956 (1157)
..||+| +||+||++++ .|+.||||++..... . ....+.+.+|+.+++.++||||+++++++.. ....+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~----~--~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~--~~~~~ 75 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC----T--EEHLKALQNEVVLSHFFRHPNIMTSWTVFTT--GSWLW 75 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC----C--HHHHHHHHHHHHHHHhCCCCCcceEeeeEec--CCceE
Confidence 346666 9999999988 578899999875421 1 1234678899999999999999999999987 56789
Q ss_pred EEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccc
Q 001103 957 TVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~ 1035 (1157)
+||||+.+++|.+++.+.. ..+++..+..++.|++.||+|||++||+||||||+|||++ ..+.+|++||+.+...
T Consensus 76 ~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~----~~~~~~~~~~~~~~~~ 151 (328)
T cd08226 76 VISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS----GDGLVSLSGLSHLYSL 151 (328)
T ss_pred EEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe----CCCcEEEechHHHhhh
Confidence 9999999999999887642 4588999999999999999999999999999999999998 6678999999854322
Q ss_pred cCCcc--------cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC-----
Q 001103 1036 CNTLV--------SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT----- 1102 (1157)
Q Consensus 1036 ~~~~~--------sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~----- 1102 (1157)
..... .....++..|+|||++.+....++.++|||||||++|+|++|++||................
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 231 (328)
T cd08226 152 VRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPL 231 (328)
T ss_pred hccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCc
Confidence 11100 01123566799999997654567899999999999999999999998765443332222110
Q ss_pred ----------------------------------------CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1103 ----------------------------------------LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1103 ----------------------------------------lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.....+..+++.+++||.+||+.||.+|||+++++++.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~ 311 (328)
T cd08226 232 DITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFF 311 (328)
T ss_pred cccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHH
Confidence 0011122356789999999999999999999999999887
Q ss_pred HHHHHh
Q 001103 1143 MSTALQ 1148 (1157)
Q Consensus 1143 Lk~aLe 1148 (1157)
-...-+
T Consensus 312 ~~~~~~ 317 (328)
T cd08226 312 KQVKEQ 317 (328)
T ss_pred HHHHHh
Confidence 554443
No 318
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.5e-35 Score=313.81 Aligned_cols=250 Identities=24% Similarity=0.410 Sum_probs=203.6
Q ss_pred eeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
|.....||+|+||.||++.. .+..||||.+.... ....+.+.+|+.+++.++||||+++++.+.. .+.
T Consensus 24 ~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--~~~ 93 (292)
T cd06658 24 LDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--------QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--GDE 93 (292)
T ss_pred HhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--------HHHHHHHHHHHHHHHhCCCCcHHHHHHheec--CCe
Confidence 44457799999999999987 46779999886431 1224668899999999999999999999877 568
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
.++||||+++++|.+++... .+++..++.++.||+.||.|||+++|+||||||+|||++ .++.+||+|||++..
T Consensus 94 ~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~----~~~~~kL~dfg~~~~ 167 (292)
T cd06658 94 LWVVMEFLEGGALTDIVTHT--RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT----SDGRIKLSDFGFCAQ 167 (292)
T ss_pred EEEEEeCCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc----CCCCEEEccCcchhh
Confidence 99999999999999888543 478899999999999999999999999999999999998 667899999999865
Q ss_pred ccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCC--CCCCC
Q 001103 1035 KCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQ--IPERC 1111 (1157)
Q Consensus 1035 ~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpe--ip~~i 1111 (1157)
.... .......|+..|+|||.+.+. .++.++|+||||+++|||++|+.||........+..+.. ..... .....
T Consensus 168 ~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 244 (292)
T cd06658 168 VSKEVPKRKSLVGTPYWMAPEVISRL--PYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRD-NLPPRVKDSHKV 244 (292)
T ss_pred cccccccCceeecCccccCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCCcccccccc
Confidence 3222 122335689999999998753 578899999999999999999999987766555444332 22222 22356
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
+..+.++|.+||..||.+|||+++++++.+....
T Consensus 245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~ 278 (292)
T cd06658 245 SSVLRGFLDLMLVREPSQRATAQELLQHPFLKLA 278 (292)
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHhhChhhhcc
Confidence 8899999999999999999999999998776543
No 319
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3.9e-35 Score=305.19 Aligned_cols=251 Identities=26% Similarity=0.378 Sum_probs=203.2
Q ss_pred eeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
|++.+.||+|++|.||++.. .+..+|+|.++..... ......+.+|++++++++||+|+++++++.. ...
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--~~~ 72 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES------EGIPKTALREIKLLKELNHPNIIKLLDVFRH--KGD 72 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc------chhHHHHHHHHHHHHHhcCCCcchHHHhhcc--CCC
Confidence 56788999999999999988 4677999988764221 1224577889999999999999999999877 568
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
.+++|||+.+ +|.+++......+++..++.++.|++.||.|||+++|+|+||||+|||++ .++.+||+|||.+..
T Consensus 73 ~~~v~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~----~~~~~~l~df~~~~~ 147 (283)
T cd05118 73 LYLVFEFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN----TEGVLKLADFGLARS 147 (283)
T ss_pred EEEEEeccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC----CCCcEEEeeeeeeEe
Confidence 9999999976 88888776556789999999999999999999999999999999999998 677899999999876
Q ss_pred ccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC---------
Q 001103 1035 KCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR--------- 1104 (1157)
Q Consensus 1035 ~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr--------- 1104 (1157)
..... ......++..|+|||.+.+. ..++.++|+||||+++|+|++|+.||......+.+..+......
T Consensus 148 ~~~~~~~~~~~~~~~~~~~PE~~~~~-~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (283)
T cd05118 148 FGSPVRPYTHYVVTRWYRAPELLLGD-KGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKF 226 (283)
T ss_pred cCCCcccccCccCcccccCcHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccc
Confidence 54433 22335688899999998754 35789999999999999999999999877655444333221000
Q ss_pred -------------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1105 -------------------PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1105 -------------------peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
......++.++++||.+||+.||.+||++.+++.+.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~ 282 (283)
T cd05118 227 TSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282 (283)
T ss_pred hhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCC
Confidence 0112246788999999999999999999999998754
No 320
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1e-34 Score=355.76 Aligned_cols=258 Identities=25% Similarity=0.380 Sum_probs=204.4
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|+++++||+|+||.||+|++. ++.||||+++.... ......+++.+|+++++.++||||+++++++.+ .
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~-----~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d--~ 74 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS-----ENPLLKKRFLREAKIAADLIHPGIVPVYSICSD--G 74 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc-----cCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee--C
Confidence 47999999999999999999884 77899999875421 112345678899999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccc----------cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCC
Q 001103 953 GTMATVTEYMVNGSLRHVLARK----------DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRP 1022 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~----------gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g 1022 (1157)
+..+++|||++|++|.+++... ...++...++.++.||+.||+|||++||+||||||+|||++ ..+
T Consensus 75 ~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd----~dg 150 (932)
T PRK13184 75 DPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG----LFG 150 (932)
T ss_pred CEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc----CCC
Confidence 6899999999999999988631 12345677889999999999999999999999999999998 677
Q ss_pred eEEEEecCCcccccCC-------------------cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCC
Q 001103 1023 ICKVGDFGLSRIKCNT-------------------LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGE 1083 (1157)
Q Consensus 1023 ~VKLiDFGLAkl~~~~-------------------~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk 1083 (1157)
.+||+|||+++..... ......+||+.|+|||++.+. .++.++|||||||++|||++|+
T Consensus 151 ~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~--~~S~kSDIWSLGVILyELLTG~ 228 (932)
T PRK13184 151 EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV--PASESTDIYALGVILYQMLTLS 228 (932)
T ss_pred CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC--CCCcHhHHHHHHHHHHHHHHCC
Confidence 8999999999754110 011235699999999999864 5789999999999999999999
Q ss_pred CCCCCCChhHHHHHhh-hcCCCCCCCCCCcHHHHHHHHHHhccCCCCCC-CHHHHHHHHHHHHH
Q 001103 1084 EPYANMHCGAIIGGIL-SNTLRPQIPERCDPEWRKLMEECWSFNPAARP-SFTEITNRLRVMST 1145 (1157)
Q Consensus 1084 ~PF~g~~~eeil~~Il-~~~lrpeip~~iSpeLrdLIkrCLqkDPskRP-SaeELLe~Lr~Lk~ 1145 (1157)
.||............. ...........+++.+.+++.+||+.||++|| +++++++.|..+..
T Consensus 229 ~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 229 FPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred CCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 9998755443322211 11111111235788999999999999999995 67778777777654
No 321
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=9.3e-35 Score=307.35 Aligned_cols=251 Identities=22% Similarity=0.309 Sum_probs=196.3
Q ss_pred EecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEE
Q 001103 882 ELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVT 959 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVM 959 (1157)
.||+|+||.||+++. .++.||+|.+.+........ +.........+++++...||+|+++++.+.. ....++||
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~v~ 76 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--ETLALNERIMLSLVSTGDCPFIVCMSYAFHT--PDKLSFIL 76 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchh--HHHHHHHHHHHHHHHhCCCCcEeeeeeeeec--CCEEEEEE
Confidence 389999999999987 46789999987653322111 1111122233445666789999999999887 56899999
Q ss_pred EeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCc
Q 001103 960 EYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL 1039 (1157)
Q Consensus 960 EYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~ 1039 (1157)
||+.|++|..++.+. ..+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+|||++.......
T Consensus 77 e~~~g~~L~~~l~~~-~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~----~~~~~kl~dfg~~~~~~~~~ 151 (278)
T cd05606 77 DLMNGGDLHYHLSQH-GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD----EHGHVRISDLGLACDFSKKK 151 (278)
T ss_pred ecCCCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC----CCCCEEEccCcCccccCccC
Confidence 999999999888654 4589999999999999999999999999999999999998 66789999999987543222
Q ss_pred ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---hHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1040 VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC---GAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1040 ~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~---eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
.....|+..|+|||.+.+. ..++.++||||+||++|+|++|+.||..... ....... ......++..+++++.
T Consensus 152 -~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~s~~~~ 227 (278)
T cd05606 152 -PHASVGTHGYMAPEVLQKG-VAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTMAVELPDSFSPELR 227 (278)
T ss_pred -CcCcCCCcCCcCcHHhcCC-CCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh--hccCCCCCCcCCHHHH
Confidence 2235699999999998743 2478899999999999999999999986532 2222112 2234456677899999
Q ss_pred HHHHHHhccCCCCCC-----CHHHHHHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARP-----SFTEITNRLRVMST 1145 (1157)
Q Consensus 1117 dLIkrCLqkDPskRP-----SaeELLe~Lr~Lk~ 1145 (1157)
++|.+||..+|.+|| ++.+++++.+.-..
T Consensus 228 ~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~ 261 (278)
T cd05606 228 SLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSL 261 (278)
T ss_pred HHHHHHhhcCHHhccCCCCCCHHHHHhCccccCC
Confidence 999999999999999 99999998766443
No 322
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=6.5e-35 Score=316.97 Aligned_cols=254 Identities=23% Similarity=0.373 Sum_probs=198.1
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++.+.||+|+||.||+|++ .|..||||++.... .......+.+|+.++++++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 76 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFE-------HQTFCQRTLREIKILRRFKHENIIGILDIIRPPS 76 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccc-------cchhHHHHHHHHHHHHhCCCCCcCchhheeeccc
Confidence 36899999999999999999987 47789999986421 1122456778999999999999999998875432
Q ss_pred ---CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 952 ---GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 952 ---~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
...++++|||+.+ +|..++.. +.+++..++.++.|++.||.|||++||+||||||+|||++ ..+.+||+|
T Consensus 77 ~~~~~~~~lv~e~~~~-~l~~~~~~--~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~----~~~~~kl~d 149 (336)
T cd07849 77 FESFNDVYIVQELMET-DLYKLIKT--QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN----TNCDLKICD 149 (336)
T ss_pred ccccceEEEEehhccc-CHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC----CCCCEEECc
Confidence 2358999999975 77777643 3588999999999999999999999999999999999998 778999999
Q ss_pred cCCcccccCCc----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh----
Q 001103 1029 FGLSRIKCNTL----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS---- 1100 (1157)
Q Consensus 1029 FGLAkl~~~~~----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~---- 1100 (1157)
||++....... ......||..|+|||.+.+. ..++.++|||||||++|+|++|+.||...+.......+..
T Consensus 150 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~ 228 (336)
T cd07849 150 FGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNS-KGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGT 228 (336)
T ss_pred ccceeeccccccccCCcCCcCcCCCccChHHhhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 99987543221 12235689999999987543 3578999999999999999999999976554332222111
Q ss_pred -----------cC---------CCCC-----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1101 -----------NT---------LRPQ-----IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1101 -----------~~---------lrpe-----ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.. .... .....++++.+||.+||+.+|.+|||+.+++++.+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~ 295 (336)
T cd07849 229 PSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYL 295 (336)
T ss_pred CCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccc
Confidence 00 0000 112357789999999999999999999999998554
No 323
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=5.1e-35 Score=313.22 Aligned_cols=252 Identities=23% Similarity=0.396 Sum_probs=205.6
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|+....||+|+||.||++.. .++.||+|++..... .....+.+|+.+++.+.||||+++++.+.. ..
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--------~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~~ 91 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ--------QRRELLFNEVVIMRDYQHQNVVEMYKSYLV--GE 91 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc--------chHHHHHHHHHHHHhCCCCchhhhhhheee--CC
Confidence 344556799999999999987 477899999865321 113557889999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
..+++|||+++++|..++.. ..+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+|||++.
T Consensus 92 ~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~----~~~~~kL~dfg~~~ 165 (297)
T cd06659 92 ELWVLMEFLQGGALTDIVSQ--TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT----LDGRVKLSDFGFCA 165 (297)
T ss_pred eEEEEEecCCCCCHHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc----cCCcEEEeechhHh
Confidence 89999999999999987754 3478999999999999999999999999999999999998 67899999999986
Q ss_pred cccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC-CCCCCCCC
Q 001103 1034 IKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL-RPQIPERC 1111 (1157)
Q Consensus 1034 l~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l-rpeip~~i 1111 (1157)
...... ......|+..|+|||++.+. .++.++|+|||||++|+|++|+.||...........+..... .......+
T Consensus 166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (297)
T cd06659 166 QISKDVPKRKSLVGTPYWMAPEVISRT--PYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKI 243 (297)
T ss_pred hcccccccccceecCccccCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCC
Confidence 433221 22345689999999999754 578899999999999999999999987765555544432211 12233457
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
++.+.++|.+||+.+|.+||++++++++.+....
T Consensus 244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 244 SPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred CHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 8899999999999999999999999998776654
No 324
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.9e-34 Score=311.01 Aligned_cols=251 Identities=27% Similarity=0.423 Sum_probs=205.3
Q ss_pred eeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
|...++||+|+||+||+|++ .+..||+|++...... .......+.+|+++++.++|||++++++++.+ ...
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~-----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--~~~ 95 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ-----TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK--EHT 95 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC-----chHHHHHHHHHHHHHHhCCCCCCccEEEEEEe--CCE
Confidence 66678899999999999987 4778999998754211 12234567889999999999999999999987 567
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
.|+||||+. ++|.+++......+++..++.++.|++.||.|||++||+|+||||+||+++ .++.+||+|||++..
T Consensus 96 ~~lv~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~----~~~~~kL~dfg~~~~ 170 (313)
T cd06633 96 AWLVMEYCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT----EPGQVKLADFGSASK 170 (313)
T ss_pred EEEEEecCC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC----CCCCEEEeecCCCcc
Confidence 899999996 477777766566789999999999999999999999999999999999998 677899999999864
Q ss_pred ccCCcccCCCCCCCcccCcccccC-CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcH
Q 001103 1035 KCNTLVSGGVRGTLPWMAPELLNG-SNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDP 1113 (1157)
Q Consensus 1035 ~~~~~~sts~~GTp~YmAPEVL~G-~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSp 1113 (1157)
... .....|+..|+|||++.. ....++.++|+|||||++|+|++|..||...........+............++.
T Consensus 171 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (313)
T cd06633 171 SSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQSNEWTD 247 (313)
T ss_pred cCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCH
Confidence 322 223568999999999853 1235788999999999999999999999887766655555444333334455778
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1114 EWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1114 eLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.+++||.+||+.+|.+||++.+++.+.+.
T Consensus 248 ~l~~li~~~l~~~P~~Rp~~~~~l~~~~~ 276 (313)
T cd06633 248 SFRGFVDYCLQKIPQERPASAELLRHDFV 276 (313)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhcCccc
Confidence 89999999999999999999999987443
No 325
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=4.1e-35 Score=312.71 Aligned_cols=255 Identities=20% Similarity=0.294 Sum_probs=197.5
Q ss_pred eEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEE
Q 001103 878 EELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 878 eILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyL 957 (1157)
.+.+.+|.|+++.||+++.+++.||||+++.... .......+.+|+++++.++||||+++++++.. ....++
T Consensus 5 ~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~~------~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~--~~~~~~ 76 (314)
T cd08216 5 LIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDSC------SKEDLKLLQQEIITSRQLQHPNILPYVTSFIV--DSELYV 76 (314)
T ss_pred hhhHhhcCCceEEEEEecCCCCEEEEEEEecccc------chhHHHHHHHHHHHHHhcCCcchhhhhheeec--CCeEEE
Confidence 3445566666777777777789999999876421 11234678899999999999999999999887 567899
Q ss_pred EEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc
Q 001103 958 VTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~ 1036 (1157)
+|||+.+++|.+++.+. ...+++..+..++.|++.||+|||+++|+||||||+|||++ .++.+||+|||.+....
T Consensus 77 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~----~~~~~kl~d~~~~~~~~ 152 (314)
T cd08216 77 VSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS----GDGKVVLSGLRYSVSMI 152 (314)
T ss_pred EEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe----cCCceEEecCccceeec
Confidence 99999999999998753 34588999999999999999999999999999999999998 66789999999886432
Q ss_pred CC--------cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC----
Q 001103 1037 NT--------LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR---- 1104 (1157)
Q Consensus 1037 ~~--------~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr---- 1104 (1157)
.. .......++..|+|||++.+....++.++|+|||||++|+|++|+.||..................
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (314)
T cd08216 153 KHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLD 232 (314)
T ss_pred cccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccc
Confidence 11 112234578889999998754345788999999999999999999999876543332211111000
Q ss_pred ----------------------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1105 ----------------------------PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1105 ----------------------------peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
......++.++.+||.+||++||++|||+++++++.+.-.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~ 300 (314)
T cd08216 233 KSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQ 300 (314)
T ss_pred cCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhh
Confidence 0011223467889999999999999999999999988653
No 326
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=347.41 Aligned_cols=252 Identities=27% Similarity=0.437 Sum_probs=217.3
Q ss_pred eeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
|.-++.||.|+||.||-+++. ...||||.+...... . ....+.++.|+++|++|.|||+|.+-|+|.. ...
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQ----s-~EKWqDIlKEVrFL~~l~HPntieYkgCyLr--e~T 100 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ----S-NEKWQDILKEVRFLRQLRHPNTIEYKGCYLR--EHT 100 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccc----c-HHHHHHHHHHHHHHHhccCCCcccccceeec--cch
Confidence 566788999999999999883 456999998865321 1 2234778999999999999999999999987 457
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
.|+|||||-| +-.+++.-..+++.+..+..|..+.+.||.|||+++.||||||..|||++ +.+.|||+|||.|..
T Consensus 101 aWLVMEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs----e~g~VKLaDFGSAsi 175 (948)
T KOG0577|consen 101 AWLVMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS----EPGLVKLADFGSASI 175 (948)
T ss_pred HHHHHHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec----CCCeeeeccccchhh
Confidence 8999999966 77788777778899999999999999999999999999999999999999 889999999999876
Q ss_pred ccCCcccCCCCCCCcccCcccccC-CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcH
Q 001103 1035 KCNTLVSGGVRGTLPWMAPELLNG-SNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDP 1113 (1157)
Q Consensus 1035 ~~~~~~sts~~GTp~YmAPEVL~G-~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSp 1113 (1157)
..+. .+|+|||.|||||++.. ..+.|+-++||||||++-.||...++|+.+++....+..|..+.-+..-...++.
T Consensus 176 ~~PA---nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQNesPtLqs~eWS~ 252 (948)
T KOG0577|consen 176 MAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPTLQSNEWSD 252 (948)
T ss_pred cCch---hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhcCCCCCCCchhHH
Confidence 5543 34789999999999853 2356899999999999999999999999999999988888877665555667999
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1114 EWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1114 eLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.|+.|+..||++-|.+|||.++++.+...+
T Consensus 253 ~F~~Fvd~CLqKipqeRptse~ll~H~fv~ 282 (948)
T KOG0577|consen 253 YFRNFVDSCLQKIPQERPTSEELLKHRFVL 282 (948)
T ss_pred HHHHHHHHHHhhCcccCCcHHHHhhcchhc
Confidence 999999999999999999999999875543
No 327
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=6.4e-35 Score=317.69 Aligned_cols=257 Identities=25% Similarity=0.332 Sum_probs=202.1
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++++.||+|+||+||++++ ++..||||.+...... ......+.+|+.+++.++||||+++++++.....
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~ 78 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDN------RIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHR 78 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccc------cchhHHHHHHHHHHHhcCCCCccchHHheecccc
Confidence 5799999999999999999987 4678999998753211 1113456789999999999999999998765322
Q ss_pred ---CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 953 ---GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 953 ---~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
...|++|||+. ++|.+++... +.+++..++.++.|++.||.|||+++++||||||+|||++ .++.+||+||
T Consensus 79 ~~~~~~~lv~e~~~-~~L~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~----~~~~~kL~Df 152 (337)
T cd07858 79 EAFNDVYIVYELMD-TDLHQIIRSS-QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN----ANCDLKICDF 152 (337)
T ss_pred cccCcEEEEEeCCC-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc----CCCCEEECcC
Confidence 35899999996 5888888654 4589999999999999999999999999999999999998 6678999999
Q ss_pred CCcccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc-------
Q 001103 1030 GLSRIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN------- 1101 (1157)
Q Consensus 1030 GLAkl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~------- 1101 (1157)
|++...... .......++..|+|||.+.+. ..++.++|+|||||++|+|++|+.||.+.........+...
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07858 153 GLARTTSEKGDFMTEYVVTRWYRAPELLLNC-SEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE 231 (337)
T ss_pred ccccccCCCcccccccccccCccChHHHhcC-CCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChH
Confidence 999764433 223345689999999988643 24788999999999999999999999865433222211100
Q ss_pred -------------------CCCC---CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1102 -------------------TLRP---QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1102 -------------------~lrp---eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.... .....+++++.+||.+||+.+|++|||+++++++.+.-.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~ 296 (337)
T cd07858 232 DLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLAS 296 (337)
T ss_pred HhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhh
Confidence 0000 112357889999999999999999999999999976543
No 328
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=9.1e-35 Score=312.24 Aligned_cols=255 Identities=27% Similarity=0.436 Sum_probs=207.2
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
..|+..+.||+|+||.||++++ .+..+|+|.+...... .......+.+|+++++.++|+|++++++++.. .
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~ 87 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ-----SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR--E 87 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc-----ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc--C
Confidence 3577788999999999999998 4667999988653111 12224567889999999999999999999887 4
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...++||||+. ++|.+++......+++..++.++.|++.||.|||+++++||||||+|||++ .++.+||+|||++
T Consensus 88 ~~~~lv~e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~----~~~~~kl~dfg~~ 162 (308)
T cd06634 88 HTAWLVMEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS----EPGLVKLGDFGSA 162 (308)
T ss_pred CeeEEEEEccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC----CCCcEEECCcccc
Confidence 67899999996 578777765556689999999999999999999999999999999999998 6678999999998
Q ss_pred ccccCCcccCCCCCCCcccCcccccCC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCC
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGS-NNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERC 1111 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~-~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~i 1111 (1157)
...... ....++..|+|||.+.+. ...++.++|||||||++|+|++|..||...........+............+
T Consensus 163 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (308)
T cd06634 163 SIMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHW 239 (308)
T ss_pred eeecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCCCCcCcccc
Confidence 754332 235689999999997531 2346889999999999999999999998776655555554444433345568
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+..+++||.+||+.+|.+||++.+++++.+...
T Consensus 240 ~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~ 272 (308)
T cd06634 240 SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLR 272 (308)
T ss_pred cHHHHHHHHHHhhCCcccCCCHHHHhhCccccc
Confidence 889999999999999999999999999877543
No 329
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.8e-34 Score=306.19 Aligned_cols=248 Identities=24% Similarity=0.442 Sum_probs=203.7
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|...+.||+|++|.||++.+ .+..+++|++.... ....+.+.+|+.+++.++||||+++++++.. ..
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~--------~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~--~~ 89 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK--------QQRRELLFNEVVIMRDYQHPNIVEMYSSYLV--GD 89 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc--------hhHHHHHHHHHHHHHHcCCCChheEEEEEEc--CC
Confidence 456678999999999999987 46779999876431 1123567899999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
..++++||+.+++|.+++.. ..+++..++.++.|++.||+|||++||+||||||+||+++ .++.++|+|||++.
T Consensus 90 ~~~~v~e~~~~~~L~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~----~~~~~~l~d~g~~~ 163 (285)
T cd06648 90 ELWVVMEFLEGGALTDIVTH--TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT----SDGRVKLSDFGFCA 163 (285)
T ss_pred eEEEEEeccCCCCHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc----CCCcEEEcccccch
Confidence 88999999999999998876 3588899999999999999999999999999999999998 67899999999876
Q ss_pred cccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCC--CCCC
Q 001103 1034 IKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQ--IPER 1110 (1157)
Q Consensus 1034 l~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpe--ip~~ 1110 (1157)
...... ......|++.|+|||.+.+. .++.++|+|||||++|+|++|+.||...........+.... .+. .+..
T Consensus 164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~ 240 (285)
T cd06648 164 QVSKEVPRRKSLVGTPYWMAPEVISRL--PYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNL-PPKLKNLHK 240 (285)
T ss_pred hhccCCcccccccCCccccCHHHhcCC--CCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcC-CCCCccccc
Confidence 533221 22335689999999998754 57889999999999999999999998776655555544332 222 2334
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
++..+.+||.+||+.+|.+||++.+++++.+.
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (285)
T cd06648 241 VSPRLRSFLDRMLVRDPAQRATAAELLNHPFL 272 (285)
T ss_pred CCHHHHHHHHHHcccChhhCcCHHHHccCccc
Confidence 78899999999999999999999999987654
No 330
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.3e-34 Score=308.98 Aligned_cols=251 Identities=27% Similarity=0.429 Sum_probs=204.5
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++++.||+|+||.||++.. .+..||+|.+.... ....+.+.+|+.+++.++||||+++++.+.. .
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~--~ 88 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ--------QPKKELIINEILVMRENKHPNIVNYLDSYLV--G 88 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc--------chHHHHHHHHHHHHhhcCCCCeeehhheeee--C
Confidence 6899999999999999999986 46779999876431 1113567889999999999999999999877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...|+||||+++++|.+++.+. .+++..+..++.|++.||.|||++|++||||||+||+++ ..+.+||+|||++
T Consensus 89 ~~~~lv~e~~~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~----~~~~~kL~dfg~~ 162 (293)
T cd06647 89 DELWVVMEYLAGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG----MDGSVKLTDFGFC 162 (293)
T ss_pred CcEEEEEecCCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc----CCCCEEEccCcce
Confidence 5789999999999999988653 378889999999999999999999999999999999998 6678999999988
Q ss_pred ccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc-CCCCCCCCC
Q 001103 1033 RIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN-TLRPQIPER 1110 (1157)
Q Consensus 1033 kl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~-~lrpeip~~ 1110 (1157)
...... .......|++.|+|||.+.+. .++.++|+|||||++|+|++|+.||........+..+... ......+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~--~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (293)
T cd06647 163 AQITPEQSKRSTMVGTPYWMAPEVVTRK--AYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEK 240 (293)
T ss_pred ecccccccccccccCChhhcCchhhccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccc
Confidence 643322 222335688999999998753 5688999999999999999999999876554433322211 112223445
Q ss_pred CcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1111 CDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1111 iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
++..++++|.+||..+|.+||++++++.+.+.-
T Consensus 241 ~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~ 273 (293)
T cd06647 241 LSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273 (293)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhcCHHHh
Confidence 688899999999999999999999999987654
No 331
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=1.3e-34 Score=301.81 Aligned_cols=252 Identities=28% Similarity=0.335 Sum_probs=198.4
Q ss_pred eeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC---CCCceeEEeeeeecCC
Q 001103 877 LEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL---HHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L---~HPNIVkLygvf~de~ 951 (1157)
|++.+.||+|+||.||+++++ +..||+|+++..... ......+.+|+.+++++ +||||+++++++....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~------~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 74 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE------EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPR 74 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc------chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence 678999999999999999984 678999998754211 11123455677777665 6999999999987643
Q ss_pred C---CcEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 G---GTMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ~---~~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
. ...+++|||+.+ +|.+++.+.. ..+++..++.++.|++.||.|||+++++|+||||+|||++ .++.+||+
T Consensus 75 ~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~----~~~~~~l~ 149 (287)
T cd07838 75 TDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT----SDGQVKIA 149 (287)
T ss_pred CCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc----cCCCEEEe
Confidence 2 238999999975 7888876533 3589999999999999999999999999999999999998 66899999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC---
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR--- 1104 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr--- 1104 (1157)
|||++.............++..|+|||++.+. .++.++|+|||||++|+|++|++||......+.+..+......
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~--~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (287)
T cd07838 150 DFGLARIYSFEMALTSVVVTLWYRAPEVLLQS--SYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSE 227 (287)
T ss_pred ccCcceeccCCcccccccccccccChHHhccC--CCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCCh
Confidence 99998765444333445688999999999764 5788999999999999999999999887766555544331100
Q ss_pred ---------------C-------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1105 ---------------P-------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1105 ---------------p-------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
. .....+++.+.+||.+||+.||.+||++.+++.+.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~ 286 (287)
T cd07838 228 EEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286 (287)
T ss_pred HhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcC
Confidence 0 001134577899999999999999999999998743
No 332
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=1.2e-34 Score=311.91 Aligned_cols=257 Identities=26% Similarity=0.339 Sum_probs=208.1
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC--
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP-- 951 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~-- 951 (1157)
+|++.+.||+|+||.||+++.. +..||||++..... .....+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~ 74 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD------DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPE 74 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc------cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcc
Confidence 5889999999999999999984 67899998876421 1122467889999999999999999999987642
Q ss_pred -CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 952 -GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 952 -~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
...+|++|||+.+ +|..++.+.. .+++..++.++.||+.||+|||++||+||||||+|||++ .++.++|+|||
T Consensus 75 ~~~~~~lv~e~~~~-~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~----~~~~~~L~dfg 148 (330)
T cd07834 75 DFNDVYIVTELMET-DLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN----SNCDLKICDFG 148 (330)
T ss_pred cccceEEEecchhh-hHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc----CCCCEEEcccC
Confidence 2368999999985 8888886544 689999999999999999999999999999999999998 66899999999
Q ss_pred CcccccCCc----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC-
Q 001103 1031 LSRIKCNTL----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP- 1105 (1157)
Q Consensus 1031 LAkl~~~~~----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp- 1105 (1157)
++....... ......++..|+|||++.+.. .++.++|+||||+++|+|++|++||......+.+..+....-.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~-~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~ 227 (330)
T cd07834 149 LARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSS-RYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPS 227 (330)
T ss_pred ceEeecccccccccccccccccCcCCceeeeccc-CCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCC
Confidence 998654432 233456899999999998642 57899999999999999999999998877655544443311100
Q ss_pred ----------------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1106 ----------------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1106 ----------------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
.....+++++.+||.+||+++|.+||++.+++.+.+.-..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 295 (330)
T cd07834 228 EEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQL 295 (330)
T ss_pred hhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhh
Confidence 0123367889999999999999999999999998766543
No 333
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.2e-34 Score=300.02 Aligned_cols=253 Identities=25% Similarity=0.402 Sum_probs=203.8
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|.+.+.||+|+||.||++++. +..+++|+++......... .....+.+|+.+++.++||||+++++++.+ ..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~ 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNP---NETVQANQEAQLLSKLDHPAIVKFHASFLE--RD 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCc---chHHHHHHHHHHHHhCCCCcHHHHHHHHhc--CC
Confidence 4788999999999999999885 3447777766532211111 112456678999999999999999999877 45
Q ss_pred cEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 954 TMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
..++||||+++++|.+++.. ....+++..++.++.|++.||.|||++|++|+||||+||+++ . +.+||+|||
T Consensus 76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~-~~~~l~d~g 150 (260)
T cd08222 76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----N-NLLKIGDFG 150 (260)
T ss_pred ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----c-CCEeecccC
Confidence 78999999999999988753 345689999999999999999999999999999999999996 2 459999999
Q ss_pred CcccccCC-cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1031 LSRIKCNT-LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1031 LAkl~~~~-~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
++...... .......|++.|+|||.+.+. .++.++|+||||+++|+|++|..||...........+.. ...+..+.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~--~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 227 (260)
T cd08222 151 VSRLLMGSCDLATTFTGTPYYMSPEALKHQ--GYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVE-GPTPSLPE 227 (260)
T ss_pred ceeecCCCcccccCCCCCcCccCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHc-CCCCCCcc
Confidence 98764332 223345689999999998643 467899999999999999999999987666555555543 33444567
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.++.++.++|.+||+.+|++||++.+++++.+
T Consensus 228 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~ 259 (260)
T cd08222 228 TYSRQLNSIMQSMLNKDPSLRPSAAEILRNPF 259 (260)
T ss_pred hhcHHHHHHHHHHhcCChhhCcCHHHHhhCCC
Confidence 78899999999999999999999999998754
No 334
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.8e-34 Score=308.53 Aligned_cols=256 Identities=18% Similarity=0.222 Sum_probs=186.2
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEECCc-----eEEEEEEecccccCCChhHHHH------HHHHHHHHHHHHhCCCCc
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWRGT-----DIAIKRIKKSCFLGRSSEQEWL------IKEFWREAHIISNLHHPN 939 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~kGt-----~VAVKVIkk~~l~~r~~e~e~l------ikqflrEIkILK~L~HPN 939 (1157)
.+...+|++.+.||+|+||+||+|++.+. .+|+|+..... .....+.. ......++..+..+.|++
T Consensus 8 ~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~---~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~ 84 (294)
T PHA02882 8 DITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN---ETIVMETLVYNNIYDIDKIALWKNIHNIDHLG 84 (294)
T ss_pred ccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccC---CchhhHHHHHHhhhhHHHHHHHHHhccCCCCC
Confidence 34557899999999999999999998543 46666543221 11101100 112334455566789999
Q ss_pred eeEEeeeeecCCC--CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccC
Q 001103 940 VVAFYGVVPNGPG--GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLR 1017 (1157)
Q Consensus 940 IVkLygvf~de~~--~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~d 1017 (1157)
|+++++....... ...+++|+++.. ++.++++.. ...++..++.++.|++.||.|||+++|+||||||+|||++
T Consensus 85 i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~-- 160 (294)
T PHA02882 85 IPKYYGCGSFKRCRMYYRFILLEKLVE-NTKEIFKRI-KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD-- 160 (294)
T ss_pred CCcEEEeeeEecCCceEEEEEEehhcc-CHHHHHHhh-ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc--
Confidence 9999987654322 234677777643 555555443 2357788899999999999999999999999999999998
Q ss_pred CCCCCeEEEEecCCcccccCC--------cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 001103 1018 DPQRPICKVGDFGLSRIKCNT--------LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANM 1089 (1157)
Q Consensus 1018 d~e~g~VKLiDFGLAkl~~~~--------~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~ 1089 (1157)
..+.++|+|||+|+..... .......||+.|+|||++.+. .++.++|||||||+||||++|++||...
T Consensus 161 --~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~--~~~~~~DiwSlG~~l~el~~g~~P~~~~ 236 (294)
T PHA02882 161 --GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA--CVTRRGDLESLGYCMLKWAGIKLPWKGF 236 (294)
T ss_pred --CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCC--CCCcHHHHHHHHHHHHHHHhCCCCCCcc
Confidence 6678999999999754211 112235699999999998864 5799999999999999999999999876
Q ss_pred Ch-hHHH--------HHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1090 HC-GAII--------GGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1090 ~~-eeil--------~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
.. ...+ ..+..... ....+++++.++++.|++++|.+||++.+|++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 237 GHNGNLIHAAKCDFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred ccchHHHHHhHHHHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 32 2211 22211111 1234688999999999999999999999999875
No 335
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=8.7e-35 Score=315.75 Aligned_cols=257 Identities=25% Similarity=0.368 Sum_probs=203.7
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG-- 950 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de-- 950 (1157)
.+|++.+.||+|+||.||++.. .+..||+|++...... ......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 78 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV------PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGA 78 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc------ccchHHHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence 6899999999999999999987 4778999998754211 11245677899999999999999999987643
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
....+++||||+. ++|.+++.... .+++..++.++.|++.||.|||+++|+||||||+|||++ .++.+||+|||
T Consensus 79 ~~~~~~lv~e~~~-~~l~~~~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~----~~~~~kl~dfg 152 (334)
T cd07855 79 DFKDVYVVMDLME-SDLHHIIHSDQ-PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN----EDCELRIGDFG 152 (334)
T ss_pred CCceEEEEEehhh-hhHHHHhccCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc----CCCcEEecccc
Confidence 2357899999996 58888886544 489999999999999999999999999999999999998 77899999999
Q ss_pred CcccccCCc-----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc----
Q 001103 1031 LSRIKCNTL-----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN---- 1101 (1157)
Q Consensus 1031 LAkl~~~~~-----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~---- 1101 (1157)
++....... ......|+..|+|||.+.+. ..++.++|||||||++|+|++|+.||........+..+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~-~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~ 231 (334)
T cd07855 153 MARGLSSSPTEHKYFMTEYVATRWYRAPELLLSL-PEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSP 231 (334)
T ss_pred cceeecccCcCCCcccccccccccccChHHhcCC-cccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCC
Confidence 987543221 12345789999999998653 34789999999999999999999999876543322221110
Q ss_pred ------------------CC--CCC-----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1102 ------------------TL--RPQ-----IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1102 ------------------~l--rpe-----ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.+ ... +....++++.++|.+||+.+|.+||++.+++.+.|.-.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~ 299 (334)
T cd07855 232 SEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQ 299 (334)
T ss_pred hhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhh
Confidence 00 001 11346889999999999999999999999999988754
No 336
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=2.3e-34 Score=311.40 Aligned_cols=260 Identities=25% Similarity=0.330 Sum_probs=201.9
Q ss_pred CCeeE-EEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHH------HHHHHHHHHHHHHhCCCCceeEEee
Q 001103 875 SDLEE-LQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEW------LIKEFWREAHIISNLHHPNVVAFYG 945 (1157)
Q Consensus 875 sdYeI-LrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~------likqflrEIkILK~L~HPNIVkLyg 945 (1157)
.+|.. .+.||.|+||+||++++ .++.||||+++............. ....+.+|+++++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45654 46799999999999987 477899999876532211100000 1124678999999999999999999
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEE
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
++.. ....+++|||+. ++|.+++... ..+++..++.++.|++.||+|||++||+|+||||+|||++ ..+.+|
T Consensus 88 ~~~~--~~~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~----~~~~~k 159 (335)
T PTZ00024 88 VYVE--GDFINLVMDIMA-SDLKKVVDRK-IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN----SKGICK 159 (335)
T ss_pred EEec--CCcEEEEEeccc-cCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC----CCCCEE
Confidence 9877 568999999997 5888888654 3488999999999999999999999999999999999998 677999
Q ss_pred EEecCCcccccC---------------CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCC
Q 001103 1026 VGDFGLSRIKCN---------------TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMH 1090 (1157)
Q Consensus 1026 LiDFGLAkl~~~---------------~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~ 1090 (1157)
|+|||++..... ........++..|+|||.+.+. ..++.++|+|||||++|+|++|+.||....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~~l~el~tg~~p~~~~~ 238 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA-EKYHFAVDMWSVGCIFAELLTGKPLFPGEN 238 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999875431 1112234578899999998764 346889999999999999999999998877
Q ss_pred hhHHHHHhhhcCC---CC-----------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1091 CGAIIGGILSNTL---RP-----------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1091 ~eeil~~Il~~~l---rp-----------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
..+.+..+..... .. ......+.++.+||.+||+.+|.+|||+++++.+.|.-
T Consensus 239 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~ 317 (335)
T PTZ00024 239 EIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFK 317 (335)
T ss_pred HHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccC
Confidence 6655544432110 00 01123578899999999999999999999999988764
No 337
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=2.6e-34 Score=303.05 Aligned_cols=253 Identities=23% Similarity=0.384 Sum_probs=200.6
Q ss_pred CeeEEEEecccCcEEEEEEEE-----CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec
Q 001103 876 DLEELQELGSGTFGTVYRGKW-----RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPN 949 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~-----kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~d 949 (1157)
+|++.+.||+|+||.||++++ +++.||||++++.... ........+.+|+++++++ +||+|+++++.+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~----~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~ 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIV----QKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHH----hhhhHHHHHHHHHHHHHhccCCcchhhhheeeec
Confidence 478899999999999999875 3567999998754211 1122346778999999999 69999999999876
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
....++||||+.+++|..++... ..+++..++.++.|++.+|.|||+++++||||||.||+++ .++.++|+||
T Consensus 77 --~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~----~~~~~~l~df 149 (288)
T cd05583 77 --DTKLHLILDYVNGGELFTHLYQR-EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD----SEGHVVLTDF 149 (288)
T ss_pred --CCEEEEEEecCCCCcHHHHHhhc-CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC----CCCCEEEEEC
Confidence 56889999999999999888654 3588889999999999999999999999999999999998 6678999999
Q ss_pred CCcccccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----hHHHHHhhhcCC
Q 001103 1030 GLSRIKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC----GAIIGGILSNTL 1103 (1157)
Q Consensus 1030 GLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~----eeil~~Il~~~l 1103 (1157)
|++....... ......|+..|+|||.+.+.....+.++|+||||+++|+|++|..||..... ......+.. .
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~ 227 (288)
T cd05583 150 GLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILK--S 227 (288)
T ss_pred ccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHc--c
Confidence 9987543222 1223568999999999876533468899999999999999999999964322 222222222 2
Q ss_pred CCCCCCCCcHHHHHHHHHHhccCCCCCCCHH---HHHHHHH
Q 001103 1104 RPQIPERCDPEWRKLMEECWSFNPAARPSFT---EITNRLR 1141 (1157)
Q Consensus 1104 rpeip~~iSpeLrdLIkrCLqkDPskRPSae---ELLe~Lr 1141 (1157)
....+..+++.++++|.+||+.||++|||+. +++++++
T Consensus 228 ~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~ 268 (288)
T cd05583 228 KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPF 268 (288)
T ss_pred CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcc
Confidence 2345667889999999999999999999854 5566554
No 338
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.3e-34 Score=302.52 Aligned_cols=250 Identities=27% Similarity=0.374 Sum_probs=199.6
Q ss_pred eeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCCC
Q 001103 877 LEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~~~ 953 (1157)
|++.+.||+|+||+||+|+.. +..||||++...... . ......+|+..++++. ||||+++++++.. ..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~----~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~--~~ 71 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS----W---EECMNLREVKSLRKLNEHPNIVKLKEVFRE--ND 71 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc----h---hHHHHHHHHHHHHhccCCCCchhHHHHhhc--CC
Confidence 678899999999999999984 667999988754211 0 1123457899999999 9999999999877 66
Q ss_pred cEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 954 TMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..++||||+ +++|.+++.... ..+++..++.++.|++.+|.|||+++|+|+||||+||+++ ..+.++|+|||++
T Consensus 72 ~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~----~~~~~~l~d~~~~ 146 (283)
T cd07830 72 ELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS----GPEVVKIADFGLA 146 (283)
T ss_pred cEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc----CCCCEEEeecccc
Confidence 899999999 779988886643 5689999999999999999999999999999999999998 6789999999999
Q ss_pred ccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc-----------
Q 001103 1033 RIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN----------- 1101 (1157)
Q Consensus 1033 kl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~----------- 1101 (1157)
.............++..|+|||++.+. ..++.++|+||||+++|+|++|++||......+.+..+...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (283)
T cd07830 147 REIRSRPPYTDYVSTRWYRAPEILLRS-TSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPE 225 (283)
T ss_pred eeccCCCCcCCCCCcccccCceeeecC-cCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhh
Confidence 866554444456689999999988643 34788999999999999999999999876554433322110
Q ss_pred ------CCCC-----------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1102 ------TLRP-----------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1102 ------~lrp-----------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.... ......+..+++||.+||+.+|.+||++++++.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~ 282 (283)
T cd07830 226 GYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPY 282 (283)
T ss_pred HhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCC
Confidence 0000 001123678999999999999999999999998753
No 339
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-36 Score=345.78 Aligned_cols=251 Identities=30% Similarity=0.468 Sum_probs=210.6
Q ss_pred EEecccCcEEEEEEEECCce--EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEE
Q 001103 881 QELGSGTFGTVYRGKWRGTD--IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATV 958 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~kGt~--VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLV 958 (1157)
-.||+|.||+||.|++..++ +|||.+.... ....+-+..|+.+-++|+|.|||+++|.+.. ++++-|.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--------sr~~QPLhEEIaLH~~LrHkNIVrYLGs~se--nGf~kIF 650 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--------SREVQPLHEEIALHSTLRHKNIVRYLGSVSE--NGFFKIF 650 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeeccccc--------chhhccHHHHHHHHHHHhhHhHHHHhhccCC--CCeEEEE
Confidence 46999999999999996554 7888776531 1224667889999999999999999999876 7799999
Q ss_pred EEeecCCcchhhhccccccc--cHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccc-
Q 001103 959 TEYMVNGSLRHVLARKDRIL--DRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIK- 1035 (1157)
Q Consensus 959 MEYmeGGSL~dlLkr~gr~L--~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~- 1035 (1157)
||-++||+|..+|..+=+++ .+..+-.+.+||++||+|||++.|||||||-+|||++ --.|.+||+|||-++..
T Consensus 651 MEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN---TySGvlKISDFGTsKRLA 727 (1226)
T KOG4279|consen 651 MEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN---TYSGVLKISDFGTSKRLA 727 (1226)
T ss_pred eecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe---eccceEEecccccchhhc
Confidence 99999999999998765566 6778888999999999999999999999999999997 24579999999998854
Q ss_pred cCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-HHHHHhhhcCCCCCCCCCCcHH
Q 001103 1036 CNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-AIIGGILSNTLRPQIPERCDPE 1114 (1157)
Q Consensus 1036 ~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-eil~~Il~~~lrpeip~~iSpe 1114 (1157)
.-...+.++.||..|||||++-.+...|+.++|||||||++.||.||++||...... ..+.++-.-..-|++|..++.+
T Consensus 728 ginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsae 807 (1226)
T KOG4279|consen 728 GINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAE 807 (1226)
T ss_pred cCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHH
Confidence 334455668999999999999877788999999999999999999999999866543 2222332234456789999999
Q ss_pred HHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1115 WRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1115 LrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.+.||.+|+..||.+||++.++|.......
T Consensus 808 ak~FilrcFepd~~~R~sA~~LL~DpFlq~ 837 (1226)
T KOG4279|consen 808 AKNFILRCFEPDPCDRPSAKDLLQDPFLQH 837 (1226)
T ss_pred HHHHHHHHcCCCcccCccHHHhccCccccc
Confidence 999999999999999999999998765443
No 340
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.4e-34 Score=313.95 Aligned_cols=257 Identities=26% Similarity=0.370 Sum_probs=202.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNG 950 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de 950 (1157)
..+|++.+.||+|+||.||+|.+ .+..+|||++.+... . ......+.+|+.+++++ +||||+++++++...
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~-~-----~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~ 79 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR-N-----ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE 79 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC-c-----chhhhhhhHHHHHHHHhcCCCCccceeeeeccC
Confidence 35788999999999999999988 467799998864311 1 11134567899999999 999999999998765
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
....+|+||||+.+ +|..++... .+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+|||
T Consensus 80 ~~~~~~lv~e~~~~-~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~----~~~~~kl~d~g 152 (337)
T cd07852 80 NDKDIYLVFEYMET-DLHAVIRAN--ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN----SDCRVKLADFG 152 (337)
T ss_pred CCceEEEEeccccc-CHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc----CCCcEEEeecc
Confidence 55678999999974 888888654 678889999999999999999999999999999999998 77899999999
Q ss_pred CcccccCC------cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC-
Q 001103 1031 LSRIKCNT------LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL- 1103 (1157)
Q Consensus 1031 LAkl~~~~------~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l- 1103 (1157)
++...... .......||..|+|||.+.+. ..++.++|+||||+++|+|++|+.||...........+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~ 231 (337)
T cd07852 153 LARSLSELEENPENPVLTDYVATRWYRAPEILLGS-TRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGP 231 (337)
T ss_pred chhccccccccccCcchhcccccccccCceeeecc-ccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCC
Confidence 98754322 122335689999999988653 3568899999999999999999999986654433332211100
Q ss_pred ----------------------------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1104 ----------------------------RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1104 ----------------------------rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.......++.++.+||.+||+.||.+|||+.+++++.+.-.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~ 300 (337)
T cd07852 232 PSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQ 300 (337)
T ss_pred CCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhh
Confidence 00112236889999999999999999999999999865433
No 341
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-35 Score=333.15 Aligned_cols=256 Identities=22% Similarity=0.323 Sum_probs=214.9
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
+.+....|..-+.||+|+||.||-++. +|+-||.|.+.++....+.. ....+.|..||++++.+.||.+--.|
T Consensus 180 qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~g-----e~maLnEk~iL~kV~s~FiVslaYAf 254 (591)
T KOG0986|consen 180 QPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKG-----ETMALNEKQILEKVSSPFIVSLAYAF 254 (591)
T ss_pred hhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhh-----hHHhhHHHHHHHHhccCcEEEEeeee
Confidence 345667889999999999999998766 57779999988765443333 24457899999999999999997777
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
.. ...+|+||..|+||+|...|.+.+ ..+++..++.++.+|+.||++||..+||+|||||+|||+| +.|+++|
T Consensus 255 eT--kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD----d~GhvRI 328 (591)
T KOG0986|consen 255 ET--KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD----DHGHVRI 328 (591)
T ss_pred cC--CCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec----cCCCeEe
Confidence 76 668999999999999998777654 5699999999999999999999999999999999999999 8899999
Q ss_pred EecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh----HHHHHhhhcC
Q 001103 1027 GDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG----AIIGGILSNT 1102 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e----eil~~Il~~~ 1102 (1157)
+|+|+|..........+.+||.+|||||+++.. .|+..+|||||||+||||+.|+.||...... ++-+.+. .
T Consensus 329 SDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne--~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~--~ 404 (591)
T KOG0986|consen 329 SDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNE--VYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTL--E 404 (591)
T ss_pred eccceEEecCCCCccccccCcccccCHHHHcCC--cccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHh--c
Confidence 999999988777777777999999999999965 5888899999999999999999999865533 2222222 2
Q ss_pred CCCCCCCCCcHHHHHHHHHHhccCCCCCC-----CHHHHHHHH
Q 001103 1103 LRPQIPERCDPEWRKLMEECWSFNPAARP-----SFTEITNRL 1140 (1157)
Q Consensus 1103 lrpeip~~iSpeLrdLIkrCLqkDPskRP-----SaeELLe~L 1140 (1157)
.+..++...++++++|.+.+|++||.+|- .+.++.+|.
T Consensus 405 ~~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~Hp 447 (591)
T KOG0986|consen 405 DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHP 447 (591)
T ss_pred chhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCc
Confidence 33457788999999999999999999984 455666654
No 342
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=2.4e-34 Score=294.18 Aligned_cols=243 Identities=27% Similarity=0.407 Sum_probs=204.1
Q ss_pred ecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEE
Q 001103 883 LGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTE 960 (1157)
Q Consensus 883 LGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVME 960 (1157)
||+|+||.||++.++ +..+|+|++.+..... ......+.+|+++++.++||||+++++.+.. ....+++||
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--~~~~~~v~e 73 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIK-----RKEVEHTLTERNILSRINHPFIVKLHYAFQT--EEKLYLVLE 73 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcc-----hHHHHHHHHHHHHHHHcCCCcHHHHHHHeec--CCeeEEEEe
Confidence 699999999999984 6789999988753221 1235678889999999999999999999876 668999999
Q ss_pred eecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCC-c
Q 001103 961 YMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNT-L 1039 (1157)
Q Consensus 961 YmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~-~ 1039 (1157)
|+.+++|.+++.... .+++..+..++.|++.||.|||+.+++|+||||+||+++ ..+.++|+|||++...... .
T Consensus 74 ~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~----~~~~~~l~d~~~~~~~~~~~~ 148 (250)
T cd05123 74 YAPGGELFSHLSKEG-RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD----ADGHIKLTDFGLAKELSSEGS 148 (250)
T ss_pred cCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc----CCCcEEEeecCcceecccCCC
Confidence 999999999987654 488999999999999999999999999999999999998 6678999999998765443 2
Q ss_pred ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHH
Q 001103 1040 VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLM 1119 (1157)
Q Consensus 1040 ~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLI 1119 (1157)
......++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...........+.. ....++...+..+.++|
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~--~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~i 224 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGK--GYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK--DPLRFPEFLSPEARDLI 224 (250)
T ss_pred cccCCcCCccccChHHhCCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCHHHHHHH
Confidence 33446689999999998754 468899999999999999999999987776555555554 33457777899999999
Q ss_pred HHHhccCCCCCCCH---HHHHHHHH
Q 001103 1120 EECWSFNPAARPSF---TEITNRLR 1141 (1157)
Q Consensus 1120 krCLqkDPskRPSa---eELLe~Lr 1141 (1157)
++||..||.+||++ ++++++.+
T Consensus 225 ~~~l~~~p~~R~~~~~~~~l~~~~~ 249 (250)
T cd05123 225 SGLLQKDPTKRLGSGGAEEIKAHPF 249 (250)
T ss_pred HHHhcCCHhhCCCcccHHHHHhCCC
Confidence 99999999999999 77777643
No 343
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-37 Score=332.53 Aligned_cols=247 Identities=26% Similarity=0.458 Sum_probs=216.3
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
-|.++++||+|+||.||++.+ .|..+|||.+.... .+++++.|+.|+++++.|++|++||.+.. +.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~s----------DLQEIIKEISIMQQC~S~yVVKYYGSYFK--~s 101 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDT----------DLQEIIKEISIMQQCKSKYVVKYYGSYFK--HS 101 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccc----------hHHHHHHHHHHHHHcCCchhhhhhhhhcc--CC
Confidence 466789999999999999977 47889999887541 25788999999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
-+|||||||..|++.+++....+.+.+..+..++...+.||+|||...=||||||..|||++ .+++.||+|||.|.
T Consensus 102 DLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN----T~G~AKLADFGVAG 177 (502)
T KOG0574|consen 102 DLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN----TDGIAKLADFGVAG 177 (502)
T ss_pred ceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc----ccchhhhhhccccc
Confidence 79999999999999999988888999999999999999999999999999999999999999 88899999999998
Q ss_pred cccCCcc-cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc-CCCCCCCCCC
Q 001103 1034 IKCNTLV-SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN-TLRPQIPERC 1111 (1157)
Q Consensus 1034 l~~~~~~-sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~-~lrpeip~~i 1111 (1157)
...+... ..+..|||.|||||+++.- .|..++||||||++..||..|++||...+....+..|-.+ ...+..|+.+
T Consensus 178 QLTDTMAKRNTVIGTPFWMAPEVI~EI--GY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~KPE~W 255 (502)
T KOG0574|consen 178 QLTDTMAKRNTVIGTPFWMAPEVIEEI--GYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKKPEEW 255 (502)
T ss_pred hhhhhHHhhCccccCcccccHHHHHHh--ccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCChHhh
Confidence 7655432 3457899999999999854 5789999999999999999999999998887666555433 2233567789
Q ss_pred cHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1112 DPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1112 SpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
+.++.+||++||-+.|++|.|+.+|++|.
T Consensus 256 S~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 256 SSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred hhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 99999999999999999999999999974
No 344
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=6.6e-34 Score=311.46 Aligned_cols=255 Identities=24% Similarity=0.349 Sum_probs=203.2
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++++.||+|+||.||++.+ .+..||||++..... .......+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07880 14 PDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQ------SELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL 87 (343)
T ss_pred ccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccccc------chHHHHHHHHHHHHHHhcCCCCccceeeeecCCc
Confidence 45799999999999999999987 477899998865311 1223456789999999999999999999986532
Q ss_pred C----CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 G----GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ~----~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
. ..+++||||+ +++|..++.. ..+++..++.++.|++.||.|||++||+||||||+|||++ .++.+||+
T Consensus 88 ~~~~~~~~~lv~e~~-~~~l~~~~~~--~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~----~~~~~kl~ 160 (343)
T cd07880 88 SLDRFHDFYLVMPFM-GTDLGKLMKH--EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN----EDCELKIL 160 (343)
T ss_pred cccccceEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc----CCCCEEEe
Confidence 2 2468999998 6788888754 3588999999999999999999999999999999999998 67789999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCC---
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLR--- 1104 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lr--- 1104 (1157)
|||++...... .....+++.|+|||.+.+. ..++.++|+|||||++|+|++|+.||...........+......
T Consensus 161 dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 161 DFGLARQTDSE--MTGYVVTRWYRAPEVILNW-MHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred ecccccccccC--ccccccCCcccCHHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 99998754332 2335689999999998753 24788999999999999999999999876654433332221100
Q ss_pred --------------------------CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1105 --------------------------PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1105 --------------------------peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
..+...+++++.++|.+||..||.+|||+.+++.+.+.-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~ 303 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEE 303 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhh
Confidence 0122457788999999999999999999999998876544
No 345
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=4.1e-34 Score=301.39 Aligned_cols=242 Identities=21% Similarity=0.336 Sum_probs=189.6
Q ss_pred CeeEEEE--ecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC
Q 001103 876 DLEELQE--LGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNG 950 (1157)
Q Consensus 876 dYeILrk--LGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de 950 (1157)
+|++.+. ||+|+||.||+++. .+..+|+|++....... .|+.....+ +||||+++++.+..
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------------~e~~~~~~~~~h~~iv~~~~~~~~- 80 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------------IEPMVHQLMKDNPNFIKLYYSVTT- 80 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------------hhHHHHHHhhcCCCEEEEEEEEec-
Confidence 4555555 49999999999987 46779999987642110 012122212 79999999999987
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCC-eEEEEec
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRP-ICKVGDF 1029 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g-~VKLiDF 1029 (1157)
.+..++||||+++++|.+++.... .+++..++.++.|++.||.|||+.||+||||||+||+++ ..+ .++|+||
T Consensus 81 -~~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~----~~~~~~~l~df 154 (267)
T PHA03390 81 -LKGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYD----RAKDRIYLCDY 154 (267)
T ss_pred -CCeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEe----CCCCeEEEecC
Confidence 458999999999999999997654 689999999999999999999999999999999999998 455 8999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHH-HHhhh-cCCCCCC
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAII-GGILS-NTLRPQI 1107 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil-~~Il~-~~lrpei 1107 (1157)
|++....... ...|+..|+|||++.+. .++.++|+||||+++|+|++|+.||......... ..+.. .......
T Consensus 155 g~~~~~~~~~---~~~~~~~y~aPE~~~~~--~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 229 (267)
T PHA03390 155 GLCKIIGTPS---CYDGTLDYFSPEKIKGH--NYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPF 229 (267)
T ss_pred ccceecCCCc---cCCCCCcccChhhhcCC--CCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCc
Confidence 9987654322 24689999999999754 5688999999999999999999999865433211 11111 1222344
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCCC-HHHHHHHHHH
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARPS-FTEITNRLRV 1142 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRPS-aeELLe~Lr~ 1142 (1157)
+..+++.+++||.+||+.+|.+||+ +++++++.|.
T Consensus 230 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~ 265 (267)
T PHA03390 230 IKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPFL 265 (267)
T ss_pred ccccCHHHHHHHHHHhccChhhCCchHHHHhcCCcc
Confidence 5578999999999999999999995 6999987653
No 346
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.9e-34 Score=334.79 Aligned_cols=260 Identities=17% Similarity=0.251 Sum_probs=187.3
Q ss_pred CCeeEEEEecccCcEEEEEEEECCc---eEEEEEEeccc---------ccCCChhHHHHHHHHHHHHHHHHhCCCCceeE
Q 001103 875 SDLEELQELGSGTFGTVYRGKWRGT---DIAIKRIKKSC---------FLGRSSEQEWLIKEFWREAHIISNLHHPNVVA 942 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~kGt---~VAVKVIkk~~---------l~~r~~e~e~likqflrEIkILK~L~HPNIVk 942 (1157)
.+|+++++||+|+||+||++.++.. .+++|.+.... ..............+.+|+.+|++|+|||||+
T Consensus 148 ~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~ 227 (501)
T PHA03210 148 AHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILK 227 (501)
T ss_pred hccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCc
Confidence 5899999999999999999876421 12222111000 00000111223456889999999999999999
Q ss_pred EeeeeecCCCCcEEEEEEeecCCcchhhhccc----cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCC
Q 001103 943 FYGVVPNGPGGTMATVTEYMVNGSLRHVLARK----DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRD 1018 (1157)
Q Consensus 943 Lygvf~de~~~~LyLVMEYmeGGSL~dlLkr~----gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd 1018 (1157)
+++++.. ....|++|+++.+ +|..++... ........++.++.||+.||+|||++|||||||||+|||++
T Consensus 228 l~~~~~~--~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~--- 301 (501)
T PHA03210 228 IEEILRS--EANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN--- 301 (501)
T ss_pred EeEEEEE--CCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---
Confidence 9999987 5578999999854 666665432 12234567788999999999999999999999999999998
Q ss_pred CCCCeEEEEecCCcccccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCC-CCCCC--hhH
Q 001103 1019 PQRPICKVGDFGLSRIKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEP-YANMH--CGA 1093 (1157)
Q Consensus 1019 ~e~g~VKLiDFGLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~P-F~g~~--~ee 1093 (1157)
.++.+||+|||++....... .....+||..|+|||++.+. .++.++|||||||+||||++|..+ |.... ...
T Consensus 302 -~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~ 378 (501)
T PHA03210 302 -CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGD--GYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGK 378 (501)
T ss_pred -CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCC--CCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHH
Confidence 67899999999997654322 23346799999999999864 578999999999999999998754 43322 111
Q ss_pred HHHHhhhc------CCC-------------------CCC-----CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1094 IIGGILSN------TLR-------------------PQI-----PERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1094 il~~Il~~------~lr-------------------pei-----p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.+..++.. .++ ..+ ...++..+.++|.+||++||.+|||+.+++++.++.
T Consensus 379 ~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~ 458 (501)
T PHA03210 379 QLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFS 458 (501)
T ss_pred HHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhh
Confidence 11111110 000 000 112456788899999999999999999999988764
No 347
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-36 Score=367.70 Aligned_cols=251 Identities=30% Similarity=0.451 Sum_probs=215.4
Q ss_pred CeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
+|+....||.|.||.||.|.. +|...|||-++..... ....+.+.+|+.+|..|+|||+|++||+-.+ ..
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~------~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvH--Re 1307 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD------HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVH--RE 1307 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc------cccCcchHHHHHHHHhccCccccccCceeec--HH
Confidence 567778899999999999877 5777999987754211 3345678899999999999999999999766 55
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.++|.||||++|+|.+++. .++..++.....+..|++.|+.|||++|||||||||+|||++ .++.+|++|||.|.
T Consensus 1308 kv~IFMEyC~~GsLa~ll~-~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld----~~g~iK~~DFGsa~ 1382 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLE-HGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD----FNGLIKYGDFGSAV 1382 (1509)
T ss_pred HHHHHHHHhccCcHHHHHH-hcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee----cCCcEEeeccccee
Confidence 7899999999999999985 566788888888899999999999999999999999999999 77899999999998
Q ss_pred cccCCc-----ccCCCCCCCcccCcccccCCC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCC
Q 001103 1034 IKCNTL-----VSGGVRGTLPWMAPELLNGSN-NRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1034 l~~~~~-----~sts~~GTp~YmAPEVL~G~~-~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpei 1107 (1157)
...+.. ......||+.|||||++.|.+ ..-..++|||||||++.||+||+.||...+.+-.+..-+.....|++
T Consensus 1383 ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~ 1462 (1509)
T KOG4645|consen 1383 KIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQI 1462 (1509)
T ss_pred EecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCC
Confidence 655442 123467999999999998754 23456899999999999999999999998877666666667778899
Q ss_pred CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1108 PERCDPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1108 p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
|..++++-++||..||..||++|.++.||+++
T Consensus 1463 P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1463 PERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred chhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 99999999999999999999999999998876
No 348
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-36 Score=339.50 Aligned_cols=262 Identities=24% Similarity=0.350 Sum_probs=235.0
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECCce--EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRGTD--IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kGt~--VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+...+++++..||-|+||.|=+++.++.. +|+|++++....+.+. .+.+..|.+||..+..|.||++|..|.+
T Consensus 417 v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQ-----qeHv~sEr~Im~~~~s~fIvrLYrTfrd 491 (732)
T KOG0614|consen 417 VKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQ-----QEHVFSERNIMMECRSDFIVRLYRTFRD 491 (732)
T ss_pred cchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhH-----HHHHHhHHHHHHhcCchHHHHHHHHhcc
Confidence 34568888999999999999999887665 8999999876655433 3567889999999999999999999998
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
..++|++||-|-||.|..+|...+ .|+......++..+++|++|||++|||+|||||+|+|++ .+|.+||.||
T Consensus 492 --~kyvYmLmEaClGGElWTiLrdRg-~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd----~~Gy~KLVDF 564 (732)
T KOG0614|consen 492 --SKYVYMLMEACLGGELWTILRDRG-SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD----NRGYLKLVDF 564 (732)
T ss_pred --chhhhhhHHhhcCchhhhhhhhcC-CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec----cCCceEEeeh
Confidence 679999999999999999997655 588899999999999999999999999999999999999 8899999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCC
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~ 1109 (1157)
|+|+.......+.++||||.|.|||++..+ ..+.++|.||||+++||||+|.+||.+.+....+..|+.+.-...+|.
T Consensus 565 GFAKki~~g~KTwTFcGTpEYVAPEIILnK--GHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~Pr 642 (732)
T KOG0614|consen 565 GFAKKIGSGRKTWTFCGTPEYVAPEIILNK--GHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFPR 642 (732)
T ss_pred hhHHHhccCCceeeecCCcccccchhhhcc--CcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhccc
Confidence 999998888888889999999999999854 458899999999999999999999999999999999998888888999
Q ss_pred CCcHHHHHHHHHHhccCCCCCC-----CHHHHHHHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARP-----SFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRP-----SaeELLe~Lr~Lk~aL 1147 (1157)
.++....+||+++...+|.+|- .+.+|-+|-|+.--.+
T Consensus 643 ~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfdw 685 (732)
T KOG0614|consen 643 RITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFDW 685 (732)
T ss_pred ccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCCh
Confidence 9999999999999999999995 4789999988765443
No 349
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=4.3e-34 Score=305.97 Aligned_cols=250 Identities=23% Similarity=0.403 Sum_probs=203.6
Q ss_pred EEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEE
Q 001103 879 ELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~Ly 956 (1157)
....||+|+||.||++.. ++..||||++.... ......+.+|+.+++.++||||+++++.+.. ....+
T Consensus 24 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--------~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--~~~~~ 93 (292)
T cd06657 24 NFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--------QQRRELLFNEVVIMRDYQHENVVEMYNSYLV--GDELW 93 (292)
T ss_pred hHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--------hhHHHHHHHHHHHHHhcCCcchhheeeEEEe--CCEEE
Confidence 346799999999999988 46789999875421 1124568899999999999999999999987 56899
Q ss_pred EEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc
Q 001103 957 TVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~ 1036 (1157)
++|||+++++|.+++... .+++..++.++.|++.||+|||++||+|+||||+||+++ .++.++|+|||++....
T Consensus 94 lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~----~~~~~~l~dfg~~~~~~ 167 (292)
T cd06657 94 VVMEFLEGGALTDIVTHT--RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT----HDGRVKLSDFGFCAQVS 167 (292)
T ss_pred EEEecCCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC----CCCCEEEcccccceecc
Confidence 999999999999887543 478889999999999999999999999999999999998 66789999999886543
Q ss_pred CCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCC--CCCCCcH
Q 001103 1037 NTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQ--IPERCDP 1113 (1157)
Q Consensus 1037 ~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpe--ip~~iSp 1113 (1157)
... ......|+..|+|||.+.+. .++.++|+||||+++|+|++|..||...........+.. ..+.. ....+++
T Consensus 168 ~~~~~~~~~~~~~~y~~pE~~~~~--~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 244 (292)
T cd06657 168 KEVPRRKSLVGTPYWMAPELISRL--PYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRD-NLPPKLKNLHKVSP 244 (292)
T ss_pred cccccccccccCccccCHHHhcCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-hCCcccCCcccCCH
Confidence 221 22335689999999998643 568899999999999999999999987765554444332 22222 2345788
Q ss_pred HHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1114 EWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1114 eLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
.+.++|.+||+.+|.+||++.+++++.+......
T Consensus 245 ~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~ 278 (292)
T cd06657 245 SLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP 278 (292)
T ss_pred HHHHHHHHHHhCCcccCcCHHHHhcChHHhccCC
Confidence 9999999999999999999999999877766554
No 350
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=7.5e-34 Score=310.42 Aligned_cols=254 Identities=28% Similarity=0.394 Sum_probs=199.4
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|++.+.||.|+||.||+|.++ +..||+|++..... ...+.+.+|+++++.++||||+++++.+.....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--------~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 76 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--------QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGS 76 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--------chHHHHHHHHHHHHhcCCCcchhhHhhhccccc
Confidence 68999999999999999999884 67899998875421 123567789999999999999999987765322
Q ss_pred ------------CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCC
Q 001103 953 ------------GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQ 1020 (1157)
Q Consensus 953 ------------~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e 1020 (1157)
...|+||||+. ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++. .
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~---~ 150 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ--GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT---E 150 (342)
T ss_pred ccccccccccccceEEEEeeccc-ccHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC---C
Confidence 35789999997 488887753 34889999999999999999999999999999999999972 3
Q ss_pred CCeEEEEecCCcccccCCcc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHH
Q 001103 1021 RPICKVGDFGLSRIKCNTLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIG 1096 (1157)
Q Consensus 1021 ~g~VKLiDFGLAkl~~~~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~ 1096 (1157)
...+||+|||++........ .....++..|+|||.+.+. ..++.++|||||||++|+|++|+.||..........
T Consensus 151 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~ 229 (342)
T cd07854 151 DLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSP-NNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ 229 (342)
T ss_pred CceEEECCcccceecCCccccccccccccccccccCHHHHhCc-cccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 45789999999875432211 1223578899999987543 357889999999999999999999998766544433
Q ss_pred HhhhcC-----------------------CCC-----CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1097 GILSNT-----------------------LRP-----QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1097 ~Il~~~-----------------------lrp-----eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.+.... ... .+...++.++++||.+||+.||.+|||+.+++++.+.-
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~ 304 (342)
T cd07854 230 LILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMS 304 (342)
T ss_pred HHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCccc
Confidence 332110 000 01234678899999999999999999999999987764
No 351
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=4.3e-34 Score=297.22 Aligned_cols=251 Identities=30% Similarity=0.420 Sum_probs=201.8
Q ss_pred eeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
|++.+.||+|.||.||+|+.. ++.||+|++..... .+.....+.+|+.+++.++||||+++++++.. ...
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~------~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--~~~ 72 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE------EEGIPSTALREISLLKELKHPNIVKLLDVIHT--ERK 72 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc------cccccHHHHHHHHHHHhcCCCCHHHHHhhhhc--CCc
Confidence 567788999999999999984 67899999886531 11223566789999999999999999999887 468
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
.++||||+.+ +|.+++.+....+++..++.++.|++.||.|||++||+||||+|+||+++ .++.+||+|||++..
T Consensus 73 ~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~----~~~~~~l~d~g~~~~ 147 (282)
T cd07829 73 LYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN----RDGVLKLADFGLARA 147 (282)
T ss_pred eEEEecCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc----CCCCEEEecCCcccc
Confidence 9999999984 89999987645689999999999999999999999999999999999998 678999999999876
Q ss_pred ccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC-----------
Q 001103 1035 KCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT----------- 1102 (1157)
Q Consensus 1035 ~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~----------- 1102 (1157)
..... ......++..|+|||.+.+. ..++.++|+|||||++|+|++|+.||........+..+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~aPE~~~~~-~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07829 148 FGIPLRTYTHEVVTLWYRAPEILLGS-KHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGV 226 (282)
T ss_pred cCCCccccCccccCcCcCChHHhcCC-cCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhh
Confidence 43332 22334567889999998754 357889999999999999999999998766554443332100
Q ss_pred ---------CCC-------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 ---------LRP-------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 ---------lrp-------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+.. ..-...+..+.++|.+||..+|.+||++.+++++.|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~ 281 (282)
T cd07829 227 TKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPY 281 (282)
T ss_pred cccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcC
Confidence 000 001124778999999999999999999999998765
No 352
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.9e-33 Score=305.06 Aligned_cols=254 Identities=24% Similarity=0.333 Sum_probs=197.5
Q ss_pred CeeEEEEecccCcEEEEEEEEC----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNG 950 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de 950 (1157)
+|++.+.||+|+||.||++++. +..||||++.... .. ....+.+.+|+.+++++ +||||+++++.....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~--~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 74 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF--SK----KILAKRALRELKLLRHFRGHKNITCLYDMDIVF 74 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc--cc----chhHHHHHHHHHHHHHhcCCCChheeeeeeeec
Confidence 4788999999999999999985 4579999987431 11 11245677899999999 599999999875432
Q ss_pred --CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 951 --PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 951 --~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
....++++|+|+. ++|..++... +.+++..++.++.||+.||+|||++||+||||||+|||++ ..+.+||+|
T Consensus 75 ~~~~~~~~~~~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~----~~~~~kl~D 148 (332)
T cd07857 75 PGNFNELYLYEELME-ADLHQIIRSG-QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN----ADCELKICD 148 (332)
T ss_pred cccCCcEEEEEeccc-CCHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc----CCCCEEeCc
Confidence 2346788999986 5888888543 4588999999999999999999999999999999999998 677899999
Q ss_pred cCCcccccCCc-----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC-
Q 001103 1029 FGLSRIKCNTL-----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT- 1102 (1157)
Q Consensus 1029 FGLAkl~~~~~-----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~- 1102 (1157)
||++....... ......||..|+|||.+.+. ..++.++|+|||||++|+|++|++||........+..++...
T Consensus 149 fg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~ 227 (332)
T cd07857 149 FGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSF-QSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLG 227 (332)
T ss_pred CCCceecccccccccccccCcccCccccCcHHHhCC-CCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhC
Confidence 99997533211 12335689999999987643 357899999999999999999999998765443333222100
Q ss_pred -------------------------CCC---CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1103 -------------------------LRP---QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1103 -------------------------lrp---eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
... ......+..+++||.+||+.||.+|||+.+++.+.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~ 295 (332)
T cd07857 228 TPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYL 295 (332)
T ss_pred CCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhh
Confidence 000 1122357889999999999999999999999998764
No 353
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.2e-35 Score=338.78 Aligned_cols=256 Identities=29% Similarity=0.482 Sum_probs=211.9
Q ss_pred CCe-eEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 875 SDL-EELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 875 sdY-eILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
.+| +...+||+|+|-+||+|.+. |-.||=-.++...+. ....-.++|..|+.+|+.|+|||||++|..|.+..
T Consensus 39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~----q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~ 114 (632)
T KOG0584|consen 39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVT----QSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTD 114 (632)
T ss_pred CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhh----cChHHHHHHHHHHHHHccCCCCceeeeeeheecCC
Confidence 344 44678999999999999985 444542222222111 11223578999999999999999999999999877
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCC--ceeccCCccceeeccCCCCCCeEEEEec
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKN--IVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkG--IIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
..++.+|+|.+..|+|..++++.++ +..+.+..|++||++||.|||++. |||||||.+||+|+ +..|.|||+|+
T Consensus 115 n~~in~iTEL~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin---G~~G~VKIGDL 190 (632)
T KOG0584|consen 115 NKTINFITELFTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN---GNLGEVKIGDL 190 (632)
T ss_pred CceeeeeeecccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc---CCcCceeecch
Confidence 7889999999999999999988765 888999999999999999999995 99999999999998 47899999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-HHHHHhhhcCCCCCCC
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-AIIGGILSNTLRPQIP 1108 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-eil~~Il~~~lrpeip 1108 (1157)
|||+......... ..|||.|||||+.. ..|...+||||||++|+||+|+..||...... .+++.+..+..+..+.
T Consensus 191 GLAtl~r~s~aks-vIGTPEFMAPEmYE---E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~ 266 (632)
T KOG0584|consen 191 GLATLLRKSHAKS-VIGTPEFMAPEMYE---ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALS 266 (632)
T ss_pred hHHHHhhccccce-eccCccccChHHHh---hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhh
Confidence 9999876665544 78999999999986 46899999999999999999999999987655 4555565555555566
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.--.+++++||.+||.. ..+|+|+.+||++..+-
T Consensus 267 kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~ 300 (632)
T KOG0584|consen 267 KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFD 300 (632)
T ss_pred ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhc
Confidence 66689999999999998 99999999999975543
No 354
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-34 Score=306.67 Aligned_cols=254 Identities=24% Similarity=0.435 Sum_probs=211.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNG 950 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de 950 (1157)
..+++.+..||.|+.|.|++++.+ |...|||.+.+.. . ....+++++.+.++... ++|+||+.||+|..
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~---N----kee~kRILmDldvv~~s~dcpyIV~c~GyFi~- 162 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG---N----KEENKRILMDLDVVLKSHDCPYIVQCFGYFIT- 162 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC---C----HHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-
Confidence 456778899999999999999885 5779999998752 1 12246777788776655 59999999999988
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeeccCCCCCCeEEEEec
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMK-NIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSk-GIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
+.-.+|.||.|.. .+..++++-.+++++..+-++..-++.||.||.++ ||||||+||+|||++ +.|++|||||
T Consensus 163 -n~dV~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD----e~GniKlCDF 236 (391)
T KOG0983|consen 163 -NTDVFICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD----ERGNIKLCDF 236 (391)
T ss_pred -CchHHHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc----cCCCEEeecc
Confidence 3457778998854 67778877778899999999999999999999976 899999999999999 8889999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCC-CCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-hHHHHHhhhcCCCCCC
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGS-NNRVSEKVDVYSFGIAMWEIITGEEPYANMHC-GAIIGGILSNTLRPQI 1107 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~-~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~-eeil~~Il~~~lrpei 1107 (1157)
|++....+....+...|-+.|||||.+... ...|+.++||||||++|+||.||+.||.+.+. .+.+..++. ..++.+
T Consensus 237 GIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~ePP~L 315 (391)
T KOG0983|consen 237 GISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEPPLL 315 (391)
T ss_pred cccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCCCCC
Confidence 999988887776667899999999999754 45689999999999999999999999998654 455555555 444555
Q ss_pred CC--CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1108 PE--RCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1108 p~--~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+. .+++.+.+|++.||++|+.+||.+.+|+++...
T Consensus 316 ~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi 352 (391)
T KOG0983|consen 316 PGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFI 352 (391)
T ss_pred CcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCcce
Confidence 43 389999999999999999999999999997543
No 355
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=2.3e-33 Score=307.49 Aligned_cols=255 Identities=24% Similarity=0.333 Sum_probs=200.6
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++++.||+|+||.||++.+ .+..||+|++++... .......+.+|+.++++++||||+++++++....
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~ 89 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ------SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR 89 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch------hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence 36899999999999999999986 477899998875311 1112356778999999999999999999875421
Q ss_pred ----CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 ----GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ----~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
....|++++++ +++|.+++... .+++..++.++.|++.||.|||++||+||||||+||+++ .++.+||+
T Consensus 90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~----~~~~~kl~ 162 (345)
T cd07877 90 SLEEFNDVYLVTHLM-GADLNNIVKCQ--KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN----EDCELKIL 162 (345)
T ss_pred cccccccEEEEehhc-ccCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc----CCCCEEEe
Confidence 23578888887 77898877543 488999999999999999999999999999999999998 67789999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC-----
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT----- 1102 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~----- 1102 (1157)
|||++...... .....++..|+|||.+.+. ..++.++|||||||++|+|++|+.||........+..+....
T Consensus 163 dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 239 (345)
T cd07877 163 DFGLARHTDDE--MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA 239 (345)
T ss_pred ccccccccccc--ccccccCCCccCHHHHhCc-cCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 99998754332 2345689999999998653 357889999999999999999999998765544333221110
Q ss_pred -------------------CCC-----CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1103 -------------------LRP-----QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1103 -------------------lrp-----eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
..+ ......++++++||.+||+.||.+||++.+++++.+...
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~ 305 (345)
T cd07877 240 ELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQ 305 (345)
T ss_pred HHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhh
Confidence 000 011235788999999999999999999999999987653
No 356
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.1e-33 Score=309.02 Aligned_cols=251 Identities=26% Similarity=0.379 Sum_probs=197.4
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|.+.+.||+|+||.||+|++ ++..||||++.+.... +.....+.+|+.+++.+.||||+++++++.....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 88 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQS------EIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS 88 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcccc------ccchhHHHHHHHHHHhcCCCCccchhheeccccc
Confidence 5899999999999999999987 4778999998754211 1123567789999999999999999999865321
Q ss_pred ----CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 953 ----GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 953 ----~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
...++||||+.. +|..++. ..+++..+..++.|++.||.|||+++|+||||||+|||++ .++.+||+|
T Consensus 89 ~~~~~~~~lv~e~~~~-~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~----~~~~~kL~d 160 (342)
T cd07879 89 GDEFQDFYLVMPYMQT-DLQKIMG---HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN----EDCELKILD 160 (342)
T ss_pred CCCCceEEEEeccccc-CHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC----CCCCEEEee
Confidence 346899999964 6655542 3478899999999999999999999999999999999998 678999999
Q ss_pred cCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCC-----
Q 001103 1029 FGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTL----- 1103 (1157)
Q Consensus 1029 FGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~l----- 1103 (1157)
||++...... .....++..|+|||.+.+. ..++.++|+|||||++|+|++|+.||.+......+..+....-
T Consensus 161 fg~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 237 (342)
T cd07879 161 FGLARHADAE--MTGYVVTRWYRAPEVILNW-MHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPE 237 (342)
T ss_pred CCCCcCCCCC--CCCceeeecccChhhhcCc-cccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence 9998754322 2345688999999998753 3478899999999999999999999987665444333322100
Q ss_pred ----------------CCCC--------CCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1104 ----------------RPQI--------PERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1104 ----------------rpei--------p~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
.+.. ....++.+.+||.+||+.||.+||++.+++.+.+.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f 300 (342)
T cd07879 238 FVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYF 300 (342)
T ss_pred HHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcch
Confidence 0000 12367789999999999999999999999988554
No 357
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=7.7e-34 Score=310.47 Aligned_cols=255 Identities=24% Similarity=0.361 Sum_probs=203.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|++.+.||+|+||.||+|++. +..||||++..... .......+.+|+.+++.+.||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~------~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ------SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS 87 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc------hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence 458999999999999999999984 67799998865311 1112356778999999999999999998876532
Q ss_pred C----CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 G----GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ~----~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
. ..+++|+||+ +++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++ ..+.+||+
T Consensus 88 ~~~~~~~~~lv~e~~-~~~L~~~~~~--~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~----~~~~~kL~ 160 (343)
T cd07851 88 SLEDFQDVYLVTHLM-GADLNNIVKC--QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN----EDCELKIL 160 (343)
T ss_pred cccccccEEEEEecC-CCCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC----CCCCEEEc
Confidence 2 3489999998 5699888865 3589999999999999999999999999999999999998 67789999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCC--
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRP-- 1105 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrp-- 1105 (1157)
|||++...... .....++..|+|||.+.+. ..++.++|||||||++|+|++|+.||........+..+......+
T Consensus 161 dfg~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~ 237 (343)
T cd07851 161 DFGLARHTDDE--MTGYVATRWYRAPEIMLNW-MHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDE 237 (343)
T ss_pred ccccccccccc--ccCCcccccccCHHHHhCC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence 99998765433 2345689999999998653 256889999999999999999999998776555444433211000
Q ss_pred ---------------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1106 ---------------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1106 ---------------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
......++++.+||.+||..+|.+|||+.+|+++.+.-.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~ 303 (343)
T cd07851 238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAE 303 (343)
T ss_pred HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccc
Confidence 011235889999999999999999999999999876543
No 358
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-34 Score=312.39 Aligned_cols=256 Identities=23% Similarity=0.387 Sum_probs=210.3
Q ss_pred cccccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEee
Q 001103 869 LQIIKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYG 945 (1157)
Q Consensus 869 i~~I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLyg 945 (1157)
.+-+...+|..++.||+|+|.+|.+++++ .+.||+|++++..+.. .+ .+..+..|..+..+. +||.+|.++.
T Consensus 244 ~~~l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nd-de----didwvqtek~vfe~asn~pflvglhs 318 (593)
T KOG0695|consen 244 SQGLGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVND-DE----DIDWVQTEKHVFEQASNNPFLVGLHS 318 (593)
T ss_pred ccccccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCC-cc----cchhHHhhHHHHHhccCCCeEEehhh
Confidence 34456689999999999999999999885 4559999999874432 22 245566788887766 7999999999
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEE
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
+|+. ...+++|.||++||+|...+.+. +.++++.++.+..+|+.||.|||++|||+||||.+|+|++ .++++|
T Consensus 319 cfqt--esrlffvieyv~ggdlmfhmqrq-rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlld----aeghik 391 (593)
T KOG0695|consen 319 CFQT--ESRLFFVIEYVNGGDLMFHMQRQ-RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLD----AEGHIK 391 (593)
T ss_pred hhcc--cceEEEEEEEecCcceeeehhhh-hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEc----cCCcee
Confidence 9998 66899999999999999888654 4599999999999999999999999999999999999999 888999
Q ss_pred EEecCCcccc-cCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCC--C-----ChhH-HHH
Q 001103 1026 VGDFGLSRIK-CNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYAN--M-----HCGA-IIG 1096 (1157)
Q Consensus 1026 LiDFGLAkl~-~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g--~-----~~ee-il~ 1096 (1157)
|+|+|+++.. .+...+.++||||.|.|||+++|. .|+..+|||+|||+||||+.|+.||.. + +.++ +++
T Consensus 392 ltdygmcke~l~~gd~tstfcgtpnyiapeilrge--eygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfq 469 (593)
T KOG0695|consen 392 LTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGE--EYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQ 469 (593)
T ss_pred ecccchhhcCCCCCcccccccCCCcccchhhhccc--ccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHH
Confidence 9999999864 344566779999999999999986 567889999999999999999999963 2 2223 344
Q ss_pred HhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCC------CHHHHHHHH
Q 001103 1097 GILSNTLRPQIPERCDPEWRKLMEECWSFNPAARP------SFTEITNRL 1140 (1157)
Q Consensus 1097 ~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRP------SaeELLe~L 1140 (1157)
-|+.... .+|..++-....+++..|.+||.+|- .+.++..+.
T Consensus 470 vilekqi--riprslsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ 517 (593)
T KOG0695|consen 470 VILEKQI--RIPRSLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHA 517 (593)
T ss_pred HHhhhcc--cccceeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcch
Confidence 4444433 47788888899999999999999983 345555543
No 359
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=2.7e-33 Score=336.15 Aligned_cols=147 Identities=26% Similarity=0.490 Sum_probs=129.2
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+|+++++||+|+||+||+|++. ++.||||++++.... .......+.+|+.+++.++||||+++++++.. .
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~-----~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--~ 76 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMI-----NKNMVHQVQAERDALALSKSPFIVHLYYSLQS--A 76 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhcc-----CHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE--C
Confidence 58999999999999999999996 788999999764321 12335678899999999999999999998877 5
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
..+||||||+.+++|..++...+ .+++..++.++.||+.||.|||+++||||||||+|||++ ..+.+||+|||++
T Consensus 77 ~~~~lVmEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~----~~g~vkL~DFGls 151 (669)
T cd05610 77 NNVYLVMEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLIS----NEGHIKLTDFGLS 151 (669)
T ss_pred CEEEEEEeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEc----CCCCEEEEeCCCC
Confidence 68999999999999999986543 588899999999999999999999999999999999998 6678999999987
Q ss_pred c
Q 001103 1033 R 1033 (1157)
Q Consensus 1033 k 1033 (1157)
+
T Consensus 152 ~ 152 (669)
T cd05610 152 K 152 (669)
T ss_pred c
Confidence 5
No 360
>cd06410 PB1_UP2 Uncharacterized protein 2. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions.
Probab=100.00 E-value=9.2e-35 Score=273.82 Aligned_cols=95 Identities=62% Similarity=1.078 Sum_probs=91.0
Q ss_pred EeecCCccccCCCCCCceeecCceEEEEccCCCCHHHHHHHHHhhcCCC--ceEEEeCCCCCCCcEEeecChhHHHHHHH
Q 001103 188 LCSFGGRIFPRPSDGKLRYVGGETRIISIRKSLTWEELMRKTSAICNQP--HTIKYQLPGEDLDALISVCSDEDLHHMIE 265 (1157)
Q Consensus 188 mcSyGG~I~pr~~d~~l~YvGG~triv~v~r~~~f~~l~~kl~~~~~~~--~~lkYqLP~edLD~LisV~~DeDL~~m~~ 265 (1157)
||||||+|+|||+||+|+|+||+|||++|+|++||+||+.||+++++.. ++||||||+||||+||||++||||+|||+
T Consensus 1 ~cs~GG~i~pr~~dg~l~Y~GG~tr~i~V~r~~s~~el~~kl~~~~~~~~~~~lky~Lp~edld~Lisv~~DeDl~~M~~ 80 (97)
T cd06410 1 LCSYGGRILPRPPDGQLRYVGGETRIVSVDRSISFKELVSKLSELFGAGVVVTLKYQLPDEDLDALISVSNDEDLKNMME 80 (97)
T ss_pred CcccCCEEeCcCCCCCEEEcCCceEEEEEcCCCCHHHHHHHHHHHhCCCCceEEEEEcCCCCcceeEEecCcHHHHHHHH
Confidence 7999999999999999999999999999999999999999999999865 49999999999999999999999999999
Q ss_pred HHHHhhhcCCCCeEEEEEe
Q 001103 266 EYQEQERIGGSQRLRIFLV 284 (1157)
Q Consensus 266 eydr~~~~~~~~rlR~FLF 284 (1157)
||+|+ ...++|+|||||
T Consensus 81 e~~~~--~~~~~rirvflf 97 (97)
T cd06410 81 EYDRL--SGGSARLRVFLF 97 (97)
T ss_pred hhccc--cCCCceEEEEEC
Confidence 99998 456789999998
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=6.4e-33 Score=302.48 Aligned_cols=253 Identities=26% Similarity=0.376 Sum_probs=198.7
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
...+|++++.||.|+||.||++++ .+..||||++.+.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~ 81 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST------PVLAKRTYRELKLLKHLRHENIISLSDIFISP 81 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc------cchhHHHHHHHHHHHhcCCCCeeeEeeeEecC
Confidence 346899999999999999999987 4677999988754211 11235677899999999999999999988653
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
....+++|||+ +++|..+++. ..+++..+..++.|++.||.|||+++|+||||||.|||++ ..+.+||+|||
T Consensus 82 -~~~~~lv~e~~-~~~L~~~~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~----~~~~~~l~dfg 153 (328)
T cd07856 82 -LEDIYFVTELL-GTDLHRLLTS--RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN----ENCDLKICDFG 153 (328)
T ss_pred -CCcEEEEeehh-ccCHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC----CCCCEEeCccc
Confidence 44788999998 5588888754 2478888889999999999999999999999999999998 67789999999
Q ss_pred CcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh----------
Q 001103 1031 LSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS---------- 1100 (1157)
Q Consensus 1031 LAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~---------- 1100 (1157)
++...... .....++..|+|||.+.+. ..++.++|+|||||++|+|++|+.||...........+..
T Consensus 154 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~-~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 154 LARIQDPQ--MTGYVSTRYYRAPEIMLTW-QKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred cccccCCC--cCCCcccccccCceeeecc-CCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 98754322 2335688899999987642 3578999999999999999999999976554222111110
Q ss_pred --------------cCCCCC-----CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1101 --------------NTLRPQ-----IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1101 --------------~~lrpe-----ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
...... ....++++++++|.+||+.+|++||++.+++.+.+.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~ 291 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYL 291 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCcc
Confidence 000000 113467899999999999999999999999998655
No 362
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-34 Score=305.10 Aligned_cols=262 Identities=23% Similarity=0.348 Sum_probs=209.3
Q ss_pred ccccCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 870 QIIKDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 870 ~~I~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
-.+...+|.+.++||+|+|+.||+++. ++..||+|++.... ..-++...+|++..++++|||+++++++.
T Consensus 16 v~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--------~~~~e~~~rEid~~rkf~s~~vl~l~dh~ 87 (302)
T KOG2345|consen 16 VIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--------QEDIEEALREIDNHRKFNSPNVLRLVDHQ 87 (302)
T ss_pred EEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--------hHHHHHHHHHHHHHHhhCCcchHHHHHHH
Confidence 347788999999999999999999885 57779999987652 11256788999999999999999999886
Q ss_pred ecCC---CCcEEEEEEeecCCcchhhhcc---ccccccHHHHHHHHHHHHHHHHHHHHCC--ceeccCCccceeeccCCC
Q 001103 948 PNGP---GGTMATVTEYMVNGSLRHVLAR---KDRILDRRKKLMLMMDAAFGMEYLHMKN--IVHFDLKCDNLLVNLRDP 1019 (1157)
Q Consensus 948 ~de~---~~~LyLVMEYmeGGSL~dlLkr---~gr~L~e~qVlkIa~QLa~ALeYLHSkG--IIHRDLKPENILLd~dd~ 1019 (1157)
..+. ....||++.|...|+|.+.+.. ++..+++.+++.|+.++++||++||+.. ++||||||.|||+.
T Consensus 88 l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---- 163 (302)
T KOG2345|consen 88 LREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---- 163 (302)
T ss_pred HHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec----
Confidence 4322 3368999999999999988754 4567999999999999999999999998 99999999999998
Q ss_pred CCCeEEEEecCCcccccCCc----------ccCCCCCCCcccCcccccCC-CCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 001103 1020 QRPICKVGDFGLSRIKCNTL----------VSGGVRGTLPWMAPELLNGS-NNRVSEKVDVYSFGIAMWEIITGEEPYAN 1088 (1157)
Q Consensus 1020 e~g~VKLiDFGLAkl~~~~~----------~sts~~GTp~YmAPEVL~G~-~~~yS~KSDIWSLGVILYELLTGk~PF~g 1088 (1157)
+.+.++|.|||.+....-.. .......|..|.|||.+.-+ ....+.++|||||||+||+|+.|..||..
T Consensus 164 ~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~ 243 (302)
T KOG2345|consen 164 DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFER 243 (302)
T ss_pred CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchH
Confidence 67799999999887532211 11223478899999998642 34578999999999999999999999964
Q ss_pred CC--hhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1089 MH--CGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1089 ~~--~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.- ...+.-++....+..+-....++.+.+||++||+.||.+||++.+++.++..+
T Consensus 244 ~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 244 IYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred HhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 22 11111122222333333345899999999999999999999999999998765
No 363
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=314.80 Aligned_cols=254 Identities=22% Similarity=0.292 Sum_probs=211.3
Q ss_pred CCeeE-EEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC
Q 001103 875 SDLEE-LQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNG 950 (1157)
Q Consensus 875 sdYeI-LrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de 950 (1157)
++|.+ -+.||-|-.|.|..+..+ +..+|+|++... .+.++|+++--.. .|||||.++++|.+.
T Consensus 61 edY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-------------~KARrEVeLHw~~s~h~~iV~IidVyeNs 127 (400)
T KOG0604|consen 61 EDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-------------PKARREVELHWMASGHPHIVSIIDVYENS 127 (400)
T ss_pred hhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-------------HHHHhHhhhhhhhcCCCceEEeehhhhhh
Confidence 46655 367999999999999874 667999987643 4456777764433 699999999998753
Q ss_pred C--CCcEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 951 P--GGTMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 951 ~--~~~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
- ..++.+|||.|+||.|...+...+ +.++++++-.|+.||..|+.|||+.+|.||||||+|+|+.... .+..+||+
T Consensus 128 ~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~-~na~lKLt 206 (400)
T KOG0604|consen 128 YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTS-PNAPLKLT 206 (400)
T ss_pred ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCC-CCcceEec
Confidence 3 457889999999999999997654 6699999999999999999999999999999999999998544 67789999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh----HHHHHhhhcCC
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG----AIIGGILSNTL 1103 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e----eil~~Il~~~l 1103 (1157)
|||+|+.........+.|-||.|.|||++.. .+|+..+|+|||||+||-||.|.+||...+.. ....+|..+.+
T Consensus 207 DfGFAK~t~~~~~L~TPc~TPyYvaPevlg~--eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy 284 (400)
T KOG0604|consen 207 DFGFAKETQEPGDLMTPCFTPYYVAPEVLGP--EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQY 284 (400)
T ss_pred ccccccccCCCccccCCcccccccCHHHhCc--hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCc
Confidence 9999998776666677899999999999974 46899999999999999999999999887653 34455555544
Q ss_pred CCC--CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1104 RPQ--IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1104 rpe--ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.++ -+..+|+..+++|+.+|+.+|.+|.|+.+++++.|...
T Consensus 285 ~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~ 327 (400)
T KOG0604|consen 285 EFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHPWINQ 327 (400)
T ss_pred cCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCchhcc
Confidence 433 33458899999999999999999999999999988643
No 364
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=7e-34 Score=327.57 Aligned_cols=254 Identities=33% Similarity=0.594 Sum_probs=218.5
Q ss_pred CCeeEEEEecccCcEEEEEEEEC----Cc--eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR----GT--DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k----Gt--~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
+.....+.||.|-||.||+|... |. .||||.-+..+..+ ..+.|..|..+|++++|||||+++|++.
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d-------~tekflqEa~iMrnfdHphIikLIGv~~ 461 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPD-------DTEKFLQEASIMRNFDHPHIIKLIGVCV 461 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChh-------hHHHHHHHHHHHHhCCCcchhheeeeee
Confidence 34445578999999999999873 33 28999887754322 2578999999999999999999999998
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
+. .+|||||.++.|.|.++|+.....++......++.||+.||.|||++.+|||||-..|||+. ...-|||+|
T Consensus 462 e~---P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs----Sp~CVKLaD 534 (974)
T KOG4257|consen 462 EQ---PMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS----SPQCVKLAD 534 (974)
T ss_pred cc---ceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec----Ccceeeecc
Confidence 75 58999999999999999998888899999999999999999999999999999999999998 677899999
Q ss_pred cCCcccccCCcccCCCC--CCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCC
Q 001103 1029 FGLSRIKCNTLVSGGVR--GTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRP 1105 (1157)
Q Consensus 1029 FGLAkl~~~~~~sts~~--GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrp 1105 (1157)
||+++..........-. -...|||||-++- ..++.++|||.|||+|||++. |..||.+..+.+++..+. ++-+.
T Consensus 535 FGLSR~~ed~~yYkaS~~kLPIKWmaPESINf--RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iE-nGeRl 611 (974)
T KOG4257|consen 535 FGLSRYLEDDAYYKASRGKLPIKWMAPESINF--RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIE-NGERL 611 (974)
T ss_pred cchhhhccccchhhccccccceeecCccccch--hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEec-CCCCC
Confidence 99999876665443333 3456999999973 468999999999999999887 999999988877776664 55667
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
+.|..|++.|..|+.+||..||.+||.+.+|...|..+..
T Consensus 612 P~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 612 PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999988877765
No 365
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=328.80 Aligned_cols=249 Identities=29% Similarity=0.446 Sum_probs=213.4
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATV 958 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLV 958 (1157)
+.||+|-||+||-|++ +|+.||||++.+..+.... ..++++|+.||+++.||.||.+-.+|+. .+.++.|
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq------esqlR~EVaILq~l~HPGiV~le~M~ET--~ervFVV 641 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ------ESQLRNEVAILQNLHHPGIVNLECMFET--PERVFVV 641 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCch------HHHHHHHHHHHHhcCCCCeeEEEEeecC--CceEEEE
Confidence 6799999999998877 5889999999987665432 2678899999999999999999999988 5689999
Q ss_pred EEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCC
Q 001103 959 TEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNT 1038 (1157)
Q Consensus 959 MEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~ 1038 (1157)
||-+.|.-|+-+|....+.+++.....++.||+.||+|||-++|+|+||||+|||+...+ .-..+||||||+|+...+.
T Consensus 642 MEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~-~FPQvKlCDFGfARiIgEk 720 (888)
T KOG4236|consen 642 MEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASAS-PFPQVKLCDFGFARIIGEK 720 (888)
T ss_pred ehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCC-CCCceeeccccceeecchh
Confidence 999988667677777777799999999999999999999999999999999999998443 6678999999999999888
Q ss_pred cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc--CCCCCCCCCCcHHHH
Q 001103 1039 LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN--TLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1039 ~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~--~lrpeip~~iSpeLr 1116 (1157)
....+.+|||.|+|||+++.+ .|...-|+||+|||+|.-|+|..||.... ++..+|-.. -+++.-+.+++++..
T Consensus 721 sFRrsVVGTPAYLaPEVLrnk--GyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIndQIQNAaFMyPp~PW~eis~~Ai 796 (888)
T KOG4236|consen 721 SFRRSVVGTPAYLAPEVLRNK--GYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DINDQIQNAAFMYPPNPWSEISPEAI 796 (888)
T ss_pred hhhhhhcCCccccCHHHHhhc--cccccccceeeeEEEEEEecccccCCCcc--chhHHhhccccccCCCchhhcCHHHH
Confidence 888889999999999999854 57888999999999999999999997543 333333322 344555677999999
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+||..+|+..-++|.|++.-+.+.|.
T Consensus 797 dlIn~LLqVkm~kRysvdk~lsh~Wl 822 (888)
T KOG4236|consen 797 DLINNLLQVKMRKRYSVDKSLSHPWL 822 (888)
T ss_pred HHHHHHHHHHHHHhcchHhhccchhh
Confidence 99999999999999999988887553
No 366
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.2e-34 Score=347.69 Aligned_cols=251 Identities=31% Similarity=0.506 Sum_probs=197.4
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC--
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG-- 950 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de-- 950 (1157)
.+|++++.||+|+||.||+++. +|+.||||+|.... ....-.++.+|+++|.+|+|||||++|..|.+.
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-------s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~ 551 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-------SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTA 551 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-------HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCC
Confidence 4788899999999999999987 69999999998652 233457789999999999999999998654320
Q ss_pred --------------------------------------------------------------------------------
Q 001103 951 -------------------------------------------------------------------------------- 950 (1157)
Q Consensus 951 -------------------------------------------------------------------------------- 950 (1157)
T Consensus 552 ~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S 631 (1351)
T KOG1035|consen 552 ELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLS 631 (1351)
T ss_pred ccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccc
Confidence
Q ss_pred ---------------------------CC--------CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHH
Q 001103 951 ---------------------------PG--------GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGME 995 (1157)
Q Consensus 951 ---------------------------~~--------~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALe 995 (1157)
.. .++||.||||+...|.+++.++...-.....|++++||+.||.
T Consensus 632 ~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 632 NTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLA 711 (1351)
T ss_pred cccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHH
Confidence 00 3579999999998888888764422256788999999999999
Q ss_pred HHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc-------------------CCcccCCCCCCCcccCcccc
Q 001103 996 YLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC-------------------NTLVSGGVRGTLPWMAPELL 1056 (1157)
Q Consensus 996 YLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~-------------------~~~~sts~~GTp~YmAPEVL 1056 (1157)
|+|++|||||||||.||+++ ....|||+|||+|+... +....++.+||..|+|||++
T Consensus 712 YIH~~giIHRDLKP~NIFLd----~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll 787 (1351)
T KOG1035|consen 712 YIHDQGIIHRDLKPRNIFLD----SRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELL 787 (1351)
T ss_pred HHHhCceeeccCCcceeEEc----CCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHh
Confidence 99999999999999999999 77899999999998511 12234567899999999999
Q ss_pred cCCC-CCCCchhHHHHHHHHHHHHHcCCCCCCC-CChhHHHHHhhhcCCCCC--CCCCCcHHHHHHHHHHhccCCCCCCC
Q 001103 1057 NGSN-NRVSEKVDVYSFGIAMWEIITGEEPYAN-MHCGAIIGGILSNTLRPQ--IPERCDPEWRKLMEECWSFNPAARPS 1132 (1157)
Q Consensus 1057 ~G~~-~~yS~KSDIWSLGVILYELLTGk~PF~g-~~~eeil~~Il~~~lrpe--ip~~iSpeLrdLIkrCLqkDPskRPS 1132 (1157)
.+.. ..|+.|+|+||||++||||+. ||.. |.-..++..+....++.+ +...--+.-+.+|.+||+.||.+|||
T Consensus 788 ~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPt 864 (1351)
T KOG1035|consen 788 SDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPT 864 (1351)
T ss_pred cccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCC
Confidence 8653 268999999999999999985 4653 333444555544444333 11122345578999999999999999
Q ss_pred HHHHHHH
Q 001103 1133 FTEITNR 1139 (1157)
Q Consensus 1133 aeELLe~ 1139 (1157)
+.+||+.
T Consensus 865 A~eLL~s 871 (1351)
T KOG1035|consen 865 ATELLNS 871 (1351)
T ss_pred HHHHhhc
Confidence 9999973
No 367
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-33 Score=322.22 Aligned_cols=261 Identities=34% Similarity=0.641 Sum_probs=225.0
Q ss_pred cccccccCCCeeEEEEecccCcEEEEEEEECC--ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEe
Q 001103 867 YGLQIIKDSDLEELQELGSGTFGTVYRGKWRG--TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFY 944 (1157)
Q Consensus 867 y~i~~I~~sdYeILrkLGsGsFGtVYlAr~kG--t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLy 944 (1157)
+..|++...++.+..+||-|-||.||.|.|+. -.||||.++... ..+++|+.|+.+|+.++|||+|+|+
T Consensus 259 ~DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDt---------MeveEFLkEAAvMKeikHpNLVqLL 329 (1157)
T KOG4278|consen 259 ADKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---------MEVEEFLKEAAVMKEIKHPNLVQLL 329 (1157)
T ss_pred cchhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcc---------hhHHHHHHHHHHHHhhcCccHHHHh
Confidence 34566777788889999999999999999964 459999887642 2367899999999999999999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhccccc-cccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCe
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLARKDR-ILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPI 1023 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr-~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~ 1023 (1157)
|+|.. ...+|||.|||..|+|.++|.+..+ .++.-..++++.||..|++||..+++|||||-..|.|+. ++..
T Consensus 330 GVCT~--EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVg----Enhi 403 (1157)
T KOG4278|consen 330 GVCTH--EPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG----ENHI 403 (1157)
T ss_pred hhhcc--CCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccc----ccce
Confidence 99988 4479999999999999999988653 466677788999999999999999999999999999998 8889
Q ss_pred EEEEecCCcccccCCccc--CCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhh
Q 001103 1024 CKVGDFGLSRIKCNTLVS--GGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILS 1100 (1157)
Q Consensus 1024 VKLiDFGLAkl~~~~~~s--ts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~ 1100 (1157)
||++||||++++..+..+ .+..-...|.|||-+. .+.++.|+|||+|||+|||+.| |..||.+.+.-.+ ..++.
T Consensus 404 VKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLA--yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqV-Y~LLE 480 (1157)
T KOG4278|consen 404 VKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV-YGLLE 480 (1157)
T ss_pred EEeeccchhhhhcCCceecccCccCcccccCccccc--ccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHH-HHHHh
Confidence 999999999987655432 2233456799999986 5678999999999999999999 9999999886554 45667
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1101 NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1101 ~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
..++..-|+.|++...+||+.||++.|.+||++.+|-+.++.+..
T Consensus 481 kgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 481 KGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred ccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 888999999999999999999999999999999999998887654
No 368
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=100.00 E-value=6.1e-33 Score=287.14 Aligned_cols=226 Identities=22% Similarity=0.256 Sum_probs=182.2
Q ss_pred cCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEEeec
Q 001103 886 GTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTEYMV 963 (1157)
Q Consensus 886 GsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVMEYme 963 (1157)
|.||.||++++ .++.||+|++++.. .+.+|...+....||||+++++++.. ....+++|||+.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------------~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~lv~e~~~ 68 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------------EYSRERLTIIPHCVPNMVCLHKYIVS--EDSVFLVLQHAE 68 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------------hhhhHHHHHHhcCCCceeehhhheec--CCeEEEEEecCC
Confidence 89999999988 46779999987641 12344555566679999999999887 568999999999
Q ss_pred CCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCcccCC
Q 001103 964 NGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLVSGG 1043 (1157)
Q Consensus 964 GGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~sts 1043 (1157)
+++|.+++.+.. .+++..+..++.|++.||.|||++||+||||||+|||++ .++.++|+|||++...... ...
T Consensus 69 ~~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~----~~~~~~l~df~~~~~~~~~--~~~ 141 (237)
T cd05576 69 GGKLWSHISKFL-NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD----DRGHIQLTYFSRWSEVEDS--CDG 141 (237)
T ss_pred CCCHHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc----CCCCEEEecccchhccccc--ccc
Confidence 999999886543 488999999999999999999999999999999999998 6778999999987654332 223
Q ss_pred CCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHh
Q 001103 1044 VRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECW 1123 (1157)
Q Consensus 1044 ~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCL 1123 (1157)
..++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...... ........++..+++.+++||.+||
T Consensus 142 ~~~~~~y~aPE~~~~~--~~~~~~DvwslG~il~el~~g~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~li~~~l 213 (237)
T cd05576 142 EAVENMYCAPEVGGIS--EETEACDWWSLGAILFELLTGKTLVECHPSG------INTHTTLNIPEWVSEEARSLLQQLL 213 (237)
T ss_pred CCcCccccCCcccCCC--CCCchhhHHHHHHHHHHHHHCcchhhcCchh------cccccccCCcccCCHHHHHHHHHHc
Confidence 4577889999998643 5688999999999999999999987643211 1111223456778999999999999
Q ss_pred ccCCCCCCCH-----HHHHHHHH
Q 001103 1124 SFNPAARPSF-----TEITNRLR 1141 (1157)
Q Consensus 1124 qkDPskRPSa-----eELLe~Lr 1141 (1157)
+.||.+||++ ++++++.+
T Consensus 214 ~~dp~~R~~~~~~~~~~~~~h~~ 236 (237)
T cd05576 214 QFNPTERLGAGVAGVEDIKSHPF 236 (237)
T ss_pred cCCHHHhcCCCccchHHHHcCCC
Confidence 9999999985 77776543
No 369
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=332.29 Aligned_cols=260 Identities=34% Similarity=0.599 Sum_probs=226.4
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEEC--C---ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEee
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKWR--G---TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYG 945 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~k--G---t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLyg 945 (1157)
+|......|.+.||.|.||.|++|+++ | ..||||.++... .+.....|+.|+.||-+++||||++|-|
T Consensus 625 EId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-------tekqrrdFL~EAsIMGQFdHPNIIrLEG 697 (996)
T KOG0196|consen 625 EIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-------TEKQRRDFLSEASIMGQFDHPNIIRLEG 697 (996)
T ss_pred hcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-------cHHHHhhhhhhhhhcccCCCCcEEEEEE
Confidence 355567788999999999999999985 3 349999998652 1334578999999999999999999999
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEE
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
+... ...+.||.|||++|+|..+|.++++.|...+...+++.|+.|++||-+.++|||||-..|||++ .+..+|
T Consensus 698 VVTk--s~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVN----snLvCK 771 (996)
T KOG0196|consen 698 VVTK--SKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVN----SNLVCK 771 (996)
T ss_pred EEec--CceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeec----cceEEE
Confidence 9987 5688999999999999999999888899999999999999999999999999999999999999 888999
Q ss_pred EEecCCcccccCCc--c--cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhh
Q 001103 1026 VGDFGLSRIKCNTL--V--SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILS 1100 (1157)
Q Consensus 1026 LiDFGLAkl~~~~~--~--sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~ 1100 (1157)
++|||+++...+.. . +.+-.-...|.|||.+. ..+++.++||||+|++|||.++ |..||-.+.+.+++..|.
T Consensus 772 VsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa--~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe- 848 (996)
T KOG0196|consen 772 VSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIA--YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIE- 848 (996)
T ss_pred eccccceeecccCCCccccccCCccceeecChhHhh--hcccCchhhccccceEEEEecccCCCcccccchHHHHHHHH-
Confidence 99999999764433 1 22223456899999997 4578999999999999999887 999999999999998886
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1101 NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1101 ~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
..++.+-|.++|..|.+||..||++|..+||.+.+|...|.++...
T Consensus 849 ~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrn 894 (996)
T KOG0196|consen 849 QGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRN 894 (996)
T ss_pred hccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcC
Confidence 4566677889999999999999999999999999999999887643
No 370
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-33 Score=330.96 Aligned_cols=258 Identities=28% Similarity=0.440 Sum_probs=202.9
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC-
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP- 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~- 951 (1157)
..|+.-+.||+|+||.||+++. .|+.||||.+++..... .++...+|+++|++|+|||||+++++-.+..
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r-------~~e~~~~EieilkKLnh~NIVk~f~iee~~~~ 85 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLR-------PRERWCREIEILKKLNHPNIVKLFDIEETKFL 85 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccc-------hHHHHHHHHHHHHHcCchhhhhhcccCCcccc
Confidence 3566778899999999999997 48889999998764221 2467789999999999999999998865533
Q ss_pred ---CCcEEEEEEeecCCcchhhhccc--cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 952 ---GGTMATVTEYMVNGSLRHVLARK--DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 952 ---~~~LyLVMEYmeGGSL~dlLkr~--gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
...-.+|||||.||+|+.+|.+. -..|++...+.++.++..||.|||++||+||||||.||++-...+.....||
T Consensus 86 ~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKL 165 (732)
T KOG4250|consen 86 GLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKL 165 (732)
T ss_pred CcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEee
Confidence 33457999999999999999763 3559999999999999999999999999999999999999744446677899
Q ss_pred EecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhH----HHHHhhhcC
Q 001103 1027 GDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGA----IIGGILSNT 1102 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~ee----il~~Il~~~ 1102 (1157)
+|||.|+...+.....++.||+.|++||+...+ ..|+..+|.|||||++|+++||.+||....... +...+..+.
T Consensus 166 tDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q-~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkk 244 (732)
T KOG4250|consen 166 TDFGAARELDDNSLFTSLVGTEEYLHPELYERQ-KKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKK 244 (732)
T ss_pred ecccccccCCCCCeeeeecCchhhcChHHHhhc-cCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccC
Confidence 999999988888888889999999999998742 357888999999999999999999997654432 222222110
Q ss_pred ---------------C----CCCCCCCCcHH----HHHHHHHHhccCCCCCC--CHHHHHHHH
Q 001103 1103 ---------------L----RPQIPERCDPE----WRKLMEECWSFNPAARP--SFTEITNRL 1140 (1157)
Q Consensus 1103 ---------------l----rpeip~~iSpe----LrdLIkrCLqkDPskRP--SaeELLe~L 1140 (1157)
. ..+.+..+++. +-..+..+|.++|++|. .+.+....+
T Consensus 245 p~~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~ 307 (732)
T KOG4250|consen 245 PSGVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEV 307 (732)
T ss_pred CCceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHH
Confidence 0 01123333333 45688889999999998 555444433
No 371
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-33 Score=325.56 Aligned_cols=250 Identities=33% Similarity=0.592 Sum_probs=213.4
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC---Cc--eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR---GT--DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k---Gt--~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
.+++...++||+|.||+|++|.|+ |+ .||||.++..... .....|++|+.+|.+|+|||+|+|||+..
T Consensus 109 ee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~-------~~mddflrEas~M~~L~H~hliRLyGvVl 181 (1039)
T KOG0199|consen 109 EEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN-------AIMDDFLREASHMLKLQHPHLIRLYGVVL 181 (1039)
T ss_pred HHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc-------hhHHHHHHHHHHHHhccCcceeEEeeeec
Confidence 345556688999999999999995 33 4999999865322 14688999999999999999999999998
Q ss_pred cCCCCcEEEEEEeecCCcchhhhcc-ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLAR-KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr-~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
+. .+.+|||+++.|+|.+.|.+ ....|.......++.||+.||.||.++++|||||-..|||+. ....|||+
T Consensus 182 ~q---p~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla----sprtVKI~ 254 (1039)
T KOG0199|consen 182 DQ---PAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA----SPRTVKIC 254 (1039)
T ss_pred cc---hhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec----ccceeeee
Confidence 73 47889999999999999977 556788888899999999999999999999999999999998 67799999
Q ss_pred ecCCcccccCCcc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcC
Q 001103 1028 DFGLSRIKCNTLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNT 1102 (1157)
Q Consensus 1028 DFGLAkl~~~~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~ 1102 (1157)
||||.+.+..... .....-...|+|||.++. ..++.++|+|++||+||||++ |+.||.+.....+++.|. ..
T Consensus 255 DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh--~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD-~~ 331 (1039)
T KOG0199|consen 255 DFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRH--RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID-AG 331 (1039)
T ss_pred cccceeccCCCCcceEecCCCcCcccccCHhHhcc--ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc-cc
Confidence 9999986543322 122334567999999984 468999999999999999999 899999999999999887 55
Q ss_pred CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1103 LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1103 lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
.+..-|..|++.+.++++.||+.+|++||++..|.+.+
T Consensus 332 erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 332 ERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred ccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 66677888999999999999999999999999997544
No 372
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=1.6e-33 Score=306.90 Aligned_cols=265 Identities=26% Similarity=0.376 Sum_probs=210.1
Q ss_pred CCeeEEEEecccCcEEEEEEEEC------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeee
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVP 948 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~ 948 (1157)
..|+.++.||+|.||.||+|..+ ...+|||.++...-. .-......||+.+++.|+||||+.+..+|.
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~------tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl 97 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDG------TGISMSACREIALLRELKHPNVISLVKVFL 97 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCC------CCcCHHHHHHHHHHHHhcCCcchhHHHHHh
Confidence 47889999999999999999552 225899988754211 112345679999999999999999999987
Q ss_pred cCCCCcEEEEEEeecCCcchhhhcc----ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLAR----KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr----~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
.. +..+++++||.+. +|.++++- ..+.++...+..|++||+.|+.|||++.|+||||||.|||+..++++.|.|
T Consensus 98 ~~-d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~V 175 (438)
T KOG0666|consen 98 SH-DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRV 175 (438)
T ss_pred cc-CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCee
Confidence 64 6789999999987 88888863 235689999999999999999999999999999999999999888899999
Q ss_pred EEEecCCcccccCCc----ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh--------
Q 001103 1025 KVGDFGLSRIKCNTL----VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-------- 1092 (1157)
Q Consensus 1025 KLiDFGLAkl~~~~~----~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-------- 1092 (1157)
||+|||+++...++. .....+-|.+|.|||.+.|. ..|+.+.|+|++|||+.||++-++.|.+....
T Consensus 176 KIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa-~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq 254 (438)
T KOG0666|consen 176 KIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGA-RHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQ 254 (438)
T ss_pred EeecccHHHHhhccccccccCCceEEEEEecChHHhccc-ccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCch
Confidence 999999999765543 23456789999999999987 57999999999999999999998888653321
Q ss_pred -HHHHHhhhcCCCC---C------CC--------------------------CCCcHHHHHHHHHHhccCCCCCCCHHHH
Q 001103 1093 -AIIGGILSNTLRP---Q------IP--------------------------ERCDPEWRKLMEECWSFNPAARPSFTEI 1136 (1157)
Q Consensus 1093 -eil~~Il~~~lrp---e------ip--------------------------~~iSpeLrdLIkrCLqkDPskRPSaeEL 1136 (1157)
..+.+|..-.-.+ . .| ..-++...+|+.+||+.||-+|.|+++.
T Consensus 255 ~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qA 334 (438)
T KOG0666|consen 255 HDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQA 334 (438)
T ss_pred HHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHH
Confidence 2223332210000 0 00 1124457789999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 001103 1137 TNRLRVMSTALQ 1148 (1157)
Q Consensus 1137 Le~Lr~Lk~aLe 1148 (1157)
+++..+....+.
T Consensus 335 leh~yF~~d~lp 346 (438)
T KOG0666|consen 335 LEHPYFTEDPLP 346 (438)
T ss_pred hcccccccCCCC
Confidence 999888776554
No 373
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-32 Score=314.40 Aligned_cols=261 Identities=28% Similarity=0.479 Sum_probs=216.2
Q ss_pred cccccCCCeeEEEEecccCcEEEEEEEECC-ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeee
Q 001103 869 LQIIKDSDLEELQELGSGTFGTVYRGKWRG-TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVV 947 (1157)
Q Consensus 869 i~~I~~sdYeILrkLGsGsFGtVYlAr~kG-t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf 947 (1157)
+.++..+.+.+.++||+|-||.|.+|+..+ ..||||.++... ....+..|.+|+++|.+|+|||||.++++|
T Consensus 532 l~EfPRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a-------~~~~r~~F~kEIkiLsqLkhPNIveLvGVC 604 (807)
T KOG1094|consen 532 LVEFPRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA-------TKNARNDFLKEIKILSRLKHPNIVELLGVC 604 (807)
T ss_pred hhhcchhheehhhhhcCcccceeEEEEecCceEEEEeecCccc-------chhHHHHHHHHHHHHhccCCCCeeEEEeee
Confidence 445666778899999999999999999987 889999988642 233468899999999999999999999999
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhcccccc-ccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRI-LDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~-L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
.. ++.+++|+|||++|+|..++.++..+ +.-.....|+.||+.||+||.+.++|||||.+.|+|++ .+.++||
T Consensus 605 ~~--DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~----~e~~iKi 678 (807)
T KOG1094|consen 605 VQ--DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVD----GEFTIKI 678 (807)
T ss_pred ec--CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeec----CcccEEe
Confidence 87 56799999999999999999877433 35566778999999999999999999999999999999 8899999
Q ss_pred EecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc--CCCCCCCCChhHHHHHhhh-
Q 001103 1027 GDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT--GEEPYANMHCGAIIGGILS- 1100 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT--Gk~PF~g~~~eeil~~Il~- 1100 (1157)
+|||+++-...... ....+-...|||+|.+.- .+++.++|+|+||++|||+++ ...||.....+.++...-.
T Consensus 679 adfgmsR~lysg~yy~vqgr~vlpiRwmawEsill--gkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~ 756 (807)
T KOG1094|consen 679 ADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILL--GKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEF 756 (807)
T ss_pred cCcccccccccCCceeeecceeeeeeehhHHHHHh--ccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhh
Confidence 99999985433222 223456778999998763 468999999999999999877 7899998888776655421
Q ss_pred --c---CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1101 --N---TLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1101 --~---~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
. ..-+..|.-++..+.++|.+||..|-.+||++++|-.+|....
T Consensus 757 ~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~~ 805 (807)
T KOG1094|consen 757 FRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQEDA 805 (807)
T ss_pred cCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHhc
Confidence 1 1122346678999999999999999999999999998887653
No 374
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-33 Score=304.79 Aligned_cols=254 Identities=21% Similarity=0.300 Sum_probs=207.3
Q ss_pred EEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCCCcEEE
Q 001103 881 QELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGPGGTMAT 957 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~~~~LyL 957 (1157)
+.||+|+|+.|--+.. +|..||||++.+.. ...+.++.||++++.+++ |+||++++++|++ +..+||
T Consensus 84 e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~--------gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd--d~~FYL 153 (463)
T KOG0607|consen 84 ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP--------GHSRSRVFREVETFYQCQGHKNILQLIEFFED--DTRFYL 153 (463)
T ss_pred HHhcCccceeeeeeeeeccchhhhhhhhhcCC--------chHHHHHHHHHHHHHHhcCCccHHHHHHHhcc--cceEEE
Confidence 5699999999998766 68889999998752 233578899999999995 9999999999998 668999
Q ss_pred EEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccC
Q 001103 958 VTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN 1037 (1157)
Q Consensus 958 VMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~ 1037 (1157)
|||-|.||+|...|.+. +.+.+..+.++.++|+.||.|||.+||.||||||+|||-...+ .-.-||||||.++.....
T Consensus 154 VfEKm~GGplLshI~~~-~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn-~vsPvKiCDfDLgSg~k~ 231 (463)
T KOG0607|consen 154 VFEKMRGGPLLSHIQKR-KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPN-KVSPVKICDFDLGSGIKL 231 (463)
T ss_pred EEecccCchHHHHHHHh-hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCC-CcCceeeecccccccccc
Confidence 99999999999888643 4689999999999999999999999999999999999997333 445689999998763211
Q ss_pred --------CcccCCCCCCCcccCccccc---CCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh---------------
Q 001103 1038 --------TLVSGGVRGTLPWMAPELLN---GSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC--------------- 1091 (1157)
Q Consensus 1038 --------~~~sts~~GTp~YmAPEVL~---G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~--------------- 1091 (1157)
.....+.+|+..|||||++. +....|+.++|+||||||||-||.|.+||.++-.
T Consensus 232 ~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ 311 (463)
T KOG0607|consen 232 NNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQ 311 (463)
T ss_pred CCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHH
Confidence 11123467999999999863 4445689999999999999999999999986432
Q ss_pred hHHHHHhhhcCCCCC--CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1092 GAIIGGILSNTLRPQ--IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1092 eeil~~Il~~~lrpe--ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
..++..|-++.+.++ -+..+|.+.+++|..+|..|+..|-++.++++++|.-.-+
T Consensus 312 ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~ 368 (463)
T KOG0607|consen 312 NKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCA 368 (463)
T ss_pred HHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccc
Confidence 245666666655432 2345899999999999999999999999999988765443
No 375
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.98 E-value=7.7e-33 Score=322.21 Aligned_cols=244 Identities=26% Similarity=0.345 Sum_probs=201.6
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNG 950 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de 950 (1157)
..+|++...+|.|+|+.|-.+.+ +++..++|++.+.. ....+|+.++... +||||+++++.+.+
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~------------~~~~~e~~~~~~~~~h~niv~~~~v~~~- 387 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA------------DDNQDEIPISLLVRDHPNIVKSHDVYED- 387 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc------------cccccccchhhhhcCCCcceeecceecC-
Confidence 46788888899999999999988 46779999998751 1122455444444 79999999999988
Q ss_pred CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 951 PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
....|+|||++.|+-|.+.+..... +. ..+..|+++|+.|+.|||++|||||||||+|||++ ...++++|+|||
T Consensus 388 -~~~~~~v~e~l~g~ell~ri~~~~~-~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~---~~~g~lrltyFG 461 (612)
T KOG0603|consen 388 -GKEIYLVMELLDGGELLRRIRSKPE-FC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD---GSAGHLRLTYFG 461 (612)
T ss_pred -CceeeeeehhccccHHHHHHHhcch-hH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec---CCCCcEEEEEec
Confidence 6789999999999988877755432 22 67778999999999999999999999999999994 277899999999
Q ss_pred CcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-HHHHHhhhcCCCCCCCC
Q 001103 1031 LSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-AIIGGILSNTLRPQIPE 1109 (1157)
Q Consensus 1031 LAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-eil~~Il~~~lrpeip~ 1109 (1157)
.++..... ..+.+-|..|.|||++.. ..|+.++||||||++||+||+|+.||...... ++...+ ..+.+..
T Consensus 462 ~a~~~~~~--~~tp~~t~~y~APEvl~~--~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i----~~~~~s~ 533 (612)
T KOG0603|consen 462 FWSELERS--CDTPALTLQYVAPEVLAI--QEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRI----QMPKFSE 533 (612)
T ss_pred hhhhCchh--hcccchhhcccChhhhcc--CCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhh----cCCcccc
Confidence 99876655 334567999999999984 47899999999999999999999999877665 333333 3445558
Q ss_pred CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1110 RCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1110 ~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
.+|.++++||.+||+.||.+|+++.+++.+.|.+.
T Consensus 534 ~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~~ 568 (612)
T KOG0603|consen 534 CVSDEAKDLLQQLLQVDPALRLGADEIGAHPWFLS 568 (612)
T ss_pred ccCHHHHHHHHHhccCChhhCcChhhhccCcchhc
Confidence 89999999999999999999999999999999843
No 376
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.98 E-value=1.5e-31 Score=267.02 Aligned_cols=238 Identities=30% Similarity=0.457 Sum_probs=195.3
Q ss_pred CcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEEeecC
Q 001103 887 TFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTEYMVN 964 (1157)
Q Consensus 887 sFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVMEYmeG 964 (1157)
+||.||++.+. +..+|+|++....... ..+.+.+|++.+++++|++|+++++.+.. ....+++|||+.+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~l~~e~~~~ 71 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKK-------KRERILREISILKKLKHPNIVRLYDVFED--EDKLYLVMEYCDG 71 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccccc-------HHHHHHHHHHHHHhCCCCcHHHHHhheee--CCEEEEEEeCCCC
Confidence 58999999995 5789999987642211 04678899999999999999999999877 4688999999999
Q ss_pred CcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCcccCCC
Q 001103 965 GSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLVSGGV 1044 (1157)
Q Consensus 965 GSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~sts~ 1044 (1157)
++|.+++..... +++..++.++.+++.+|.|||+.+|+|+||+|.||+++ .++.++|+|||.+............
T Consensus 72 ~~L~~~~~~~~~-~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~----~~~~~~l~d~~~~~~~~~~~~~~~~ 146 (244)
T smart00220 72 GDLFDLLKKRGR-LSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD----EDGHVKLADFGLARQLDPGGLLTTF 146 (244)
T ss_pred CCHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC----CCCcEEEccccceeeeccccccccc
Confidence 999999875443 78899999999999999999999999999999999998 6689999999999876554444556
Q ss_pred CCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCC-CChhHHHHHhhhcCCCCCCCCC-CcHHHHHHHHHH
Q 001103 1045 RGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYAN-MHCGAIIGGILSNTLRPQIPER-CDPEWRKLMEEC 1122 (1157)
Q Consensus 1045 ~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g-~~~eeil~~Il~~~lrpeip~~-iSpeLrdLIkrC 1122 (1157)
.++..|++||.+.+. .++.++|+|+||+++|+|++|..||.. .........+............ ++.++.+++.+|
T Consensus 147 ~~~~~~~~pE~~~~~--~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 224 (244)
T smart00220 147 VGTPEYMAPEVLLGK--GYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKL 224 (244)
T ss_pred cCCcCCCCHHHHccC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHHHHHHHH
Confidence 789999999998743 568899999999999999999999987 4444444433332222211111 788999999999
Q ss_pred hccCCCCCCCHHHHHHHH
Q 001103 1123 WSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1123 LqkDPskRPSaeELLe~L 1140 (1157)
|..+|.+||++.+++++.
T Consensus 225 l~~~p~~Rp~~~~~~~~~ 242 (244)
T smart00220 225 LVKDPEKRLTAEEALQHP 242 (244)
T ss_pred ccCCchhccCHHHHhhCC
Confidence 999999999999999854
No 377
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=4.5e-32 Score=322.71 Aligned_cols=255 Identities=26% Similarity=0.405 Sum_probs=215.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNG 950 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de 950 (1157)
...|++.+.||.|.+|.||+++. .++..|+|++..... .-+++..|.++|+.+ +|||++.+|++|...
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---------~deEiE~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---------EEEEIELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---------ccHHHHHHHHHHHhccCCCCcceEEEEEEEe
Confidence 35789999999999999998876 688899998876421 124456788888887 699999999998532
Q ss_pred ---CCCcEEEEEEeecCCcchhhhcc-ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 951 ---PGGTMATVTEYMVNGSLRHVLAR-KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 951 ---~~~~LyLVMEYmeGGSL~dlLkr-~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
.++.+|||||||.||+.-++++. .+..+.|..+.+|+.+++.||.+||.+.+||||||-.|||++ .++.|||
T Consensus 89 ~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT----~e~~VKL 164 (953)
T KOG0587|consen 89 DPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT----ENAEVKL 164 (953)
T ss_pred cCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe----ccCcEEE
Confidence 24589999999999999999876 367799999999999999999999999999999999999999 8899999
Q ss_pred EecCCcccccCC-cccCCCCCCCcccCcccccC---CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC
Q 001103 1027 GDFGLSRIKCNT-LVSGGVRGTLPWMAPELLNG---SNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT 1102 (1157)
Q Consensus 1027 iDFGLAkl~~~~-~~sts~~GTp~YmAPEVL~G---~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~ 1102 (1157)
+|||++...... ....+++|||.|||||++.. ....|+.++|+||||++..||..|.+|+-.++....+..|-.+.
T Consensus 165 vDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNP 244 (953)
T KOG0587|consen 165 VDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNP 244 (953)
T ss_pred eeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCCCCC
Confidence 999998765443 34556789999999999854 34567889999999999999999999999999988877775543
Q ss_pred CCCC-CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1103 LRPQ-IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1103 lrpe-ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+.. -|..+++++.+||..||.+|..+||++.++++|..
T Consensus 245 PPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpF 284 (953)
T KOG0587|consen 245 PPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPF 284 (953)
T ss_pred CccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCc
Confidence 3322 36789999999999999999999999999998743
No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=3e-33 Score=300.31 Aligned_cols=261 Identities=24% Similarity=0.389 Sum_probs=210.6
Q ss_pred ccccccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHH-hCCCCceeEEe
Q 001103 868 GLQIIKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIIS-NLHHPNVVAFY 944 (1157)
Q Consensus 868 ~i~~I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK-~L~HPNIVkLy 944 (1157)
.+..+...+++.+..||.|+||+|++..++ |+..|||+++.... +...++++.|.+... .-+.||||++|
T Consensus 57 ~~~~F~~~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-------~keq~rll~e~d~~mks~~cp~IVkfy 129 (361)
T KOG1006|consen 57 HLHTFTSDNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-------EKEQKRLLMEHDTVMKSSNCPNIVKFY 129 (361)
T ss_pred cccccccchHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-------hHHHHHHHHHHHHHHhhcCCcHHHHHh
Confidence 345677778888999999999999998885 77899999987532 222467778887654 45799999999
Q ss_pred eeeecCCCCcEEEEEEeecCCcchhhhcc----ccccccHHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeeccCCC
Q 001103 945 GVVPNGPGGTMATVTEYMVNGSLRHVLAR----KDRILDRRKKLMLMMDAAFGMEYLHMK-NIVHFDLKCDNLLVNLRDP 1019 (1157)
Q Consensus 945 gvf~de~~~~LyLVMEYmeGGSL~dlLkr----~gr~L~e~qVlkIa~QLa~ALeYLHSk-GIIHRDLKPENILLd~dd~ 1019 (1157)
|.... ++-+||.||.|.- +|..+.+. ....+++..+-.|..-.+.||.||.+. +|||||+||+|||++
T Consensus 130 Ga~F~--EGdcWiCMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld---- 202 (361)
T KOG1006|consen 130 GALFS--EGDCWICMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD---- 202 (361)
T ss_pred hhhhc--CCceeeeHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe----
Confidence 99877 5679999999954 66555432 345588888888888999999999975 899999999999999
Q ss_pred CCCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh-hHHHHHh
Q 001103 1020 QRPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC-GAIIGGI 1098 (1157)
Q Consensus 1020 e~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~-eeil~~I 1098 (1157)
..|.+||||||.+....+....+...|-..|||||.+......|+.++|+||||++|||+.||+.|+..... .+.+..+
T Consensus 203 r~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~V 282 (361)
T KOG1006|consen 203 RHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQV 282 (361)
T ss_pred cCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHH
Confidence 788999999999988777776666778899999999987666799999999999999999999999987553 3344444
Q ss_pred hhcCCCCC-CC---CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1099 LSNTLRPQ-IP---ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1099 l~~~lrpe-ip---~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
..+..+.. .+ ...+..+..+|..||.+|...||.+.+|+++...
T Consensus 283 v~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fy 330 (361)
T KOG1006|consen 283 VIGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFY 330 (361)
T ss_pred HcCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchh
Confidence 44433322 22 2378899999999999999999999999986543
No 379
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.97 E-value=1.6e-31 Score=329.11 Aligned_cols=241 Identities=23% Similarity=0.368 Sum_probs=183.3
Q ss_pred eeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
+...+.||+|+||.||+|++ .+..||||+++.... ....|++++++++|||||++++++.+ ...
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------------~~~~~~~~l~~l~HpnIv~~~~~~~~--~~~ 757 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------------IPSSEIADMGKLQHPNIVKLIGLCRS--EKG 757 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------------ccHHHHHHHhhCCCCCcceEEEEEEc--CCC
Confidence 45567899999999999997 477899998864311 11245788999999999999999987 457
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHH---HCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLH---MKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLH---SkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
.|+||||+++|+|.++++. +++..+..++.|++.||+||| +.+|+||||||+|||++ .....++. ||.
T Consensus 758 ~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~----~~~~~~~~-~~~ 828 (968)
T PLN00113 758 AYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIID----GKDEPHLR-LSL 828 (968)
T ss_pred CEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEEC----CCCceEEE-ecc
Confidence 8999999999999999953 788999999999999999999 66999999999999998 44455554 665
Q ss_pred cccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh--HHHHH---hh-----hc
Q 001103 1032 SRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG--AIIGG---IL-----SN 1101 (1157)
Q Consensus 1032 Akl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e--eil~~---Il-----~~ 1101 (1157)
....... ....||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..... .. ..
T Consensus 829 ~~~~~~~---~~~~~t~~y~aPE~~~~~--~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 903 (968)
T PLN00113 829 PGLLCTD---TKCFISSAYVAPETRETK--DITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDM 903 (968)
T ss_pred ccccccC---CCccccccccCcccccCC--CCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhh
Confidence 4332221 223689999999998754 5799999999999999999999998542211 11110 00 00
Q ss_pred CCCCCCC------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1102 TLRPQIP------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1102 ~lrpeip------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
...+.+. .....++.+++.+||+.||++||+++++++.|+.+..
T Consensus 904 ~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 904 WIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred eeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 1111111 1122356789999999999999999999999988765
No 380
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=5.5e-31 Score=313.72 Aligned_cols=260 Identities=32% Similarity=0.534 Sum_probs=218.2
Q ss_pred cccccCCCeeEEEEecccCcEEEEEEEEC---------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCC
Q 001103 869 LQIIKDSDLEELQELGSGTFGTVYRGKWR---------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHP 938 (1157)
Q Consensus 869 i~~I~~sdYeILrkLGsGsFGtVYlAr~k---------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HP 938 (1157)
.+++....+.+.+.||+|.||.|++|..+ ...||||.++..... ...+.+..|+++|+.+ .||
T Consensus 290 ~~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-------~~~~~~~~El~~m~~~g~H~ 362 (609)
T KOG0200|consen 290 KWEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-------SEKKDLMSELNVLKELGKHP 362 (609)
T ss_pred ceeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-------HHHHHHHHHHHHHHHhcCCc
Confidence 45566666777789999999999998753 234999988765321 2257788999999999 699
Q ss_pred ceeEEeeeeecCCCCcEEEEEEeecCCcchhhhcccc---------------ccccHHHHHHHHHHHHHHHHHHHHCCce
Q 001103 939 NVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKD---------------RILDRRKKLMLMMDAAFGMEYLHMKNIV 1003 (1157)
Q Consensus 939 NIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~g---------------r~L~e~qVlkIa~QLa~ALeYLHSkGII 1003 (1157)
||+.+.|++.. .+.+++|+||+..|+|.+++...+ ..+.....+.++.||+.|++||+++.+|
T Consensus 363 niv~llG~~t~--~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~v 440 (609)
T KOG0200|consen 363 NIVNLLGACTQ--DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCV 440 (609)
T ss_pred chhhheeeecc--CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCcc
Confidence 99999999988 778999999999999999998765 3488899999999999999999999999
Q ss_pred eccCCccceeeccCCCCCCeEEEEecCCcccccCCccc--CCCCC--CCcccCcccccCCCCCCCchhHHHHHHHHHHHH
Q 001103 1004 HFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLVS--GGVRG--TLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEI 1079 (1157)
Q Consensus 1004 HRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~s--ts~~G--Tp~YmAPEVL~G~~~~yS~KSDIWSLGVILYEL 1079 (1157)
||||-..|||++ .+..+||+|||+|+........ ..-.| ...|||||.+.. ..|+.++||||+|++||||
T Consensus 441 HRDLAaRNVLi~----~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~--~~ft~kSDVWSfGI~L~Ei 514 (609)
T KOG0200|consen 441 HRDLAARNVLIT----KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD--RVFTSKSDVWSFGILLWEI 514 (609)
T ss_pred chhhhhhhEEec----CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc--CcccccchhhHHHHHHHHH
Confidence 999999999998 7789999999999854332221 21222 345999999985 5789999999999999999
Q ss_pred Hc-CCCCCCCCC-hhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1080 IT-GEEPYANMH-CGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1080 LT-Gk~PF~g~~-~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
++ |..||.+.. ..++ ...+..+.+...|..+++++.++|+.||+.+|.+||++.++.+.+....
T Consensus 515 fsLG~~PYp~~~~~~~l-~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 515 FTLGGTPYPGIPPTEEL-LEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred hhCCCCCCCCCCcHHHH-HHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 99 999999876 4445 4466677888899999999999999999999999999999999998854
No 381
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.6e-32 Score=311.51 Aligned_cols=264 Identities=20% Similarity=0.320 Sum_probs=208.9
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeec
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPN 949 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~d 949 (1157)
+...-|..++.||-|+||.|.+++.. ...||+|.+++...+.+ .-+..+..|..||..-+.+-||+||..|++
T Consensus 626 MdKSmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~r-----nQvaHVKAERDILAEADn~WVVrLyySFQD 700 (1034)
T KOG0608|consen 626 MDKSMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMR-----NQVAHVKAERDILAEADNEWVVRLYYSFQD 700 (1034)
T ss_pred ccccceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhh-----hhhhhhhhhhhhHhhcCCcceEEEEEEecc
Confidence 44566888999999999999998764 34499999887654433 234567789999999999999999999998
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
...+|+||||++||++..+|-+.+ .|++..++.++.+|..|+++.|..|+|||||||+||||| .+|++||+||
T Consensus 701 --kdnLYFVMdYIPGGDmMSLLIrmg-IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILID----rdGHIKLTDF 773 (1034)
T KOG0608|consen 701 --KDNLYFVMDYIPGGDMMSLLIRMG-IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID----RDGHIKLTDF 773 (1034)
T ss_pred --CCceEEEEeccCCccHHHHHHHhc-cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEc----cCCceeeeec
Confidence 679999999999999999997665 589999999999999999999999999999999999999 7889999999
Q ss_pred CCcccc---c------C----------------------------------CcccCCCCCCCcccCcccccCCCCCCCch
Q 001103 1030 GLSRIK---C------N----------------------------------TLVSGGVRGTLPWMAPELLNGSNNRVSEK 1066 (1157)
Q Consensus 1030 GLAkl~---~------~----------------------------------~~~sts~~GTp~YmAPEVL~G~~~~yS~K 1066 (1157)
||++-. . + .......+||+.|+|||++... .|+..
T Consensus 774 GLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~--g~~q~ 851 (1034)
T KOG0608|consen 774 GLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLART--GYTQL 851 (1034)
T ss_pred cccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhccc--Ccccc
Confidence 998620 0 0 0011235799999999999743 57888
Q ss_pred hHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhh--hcCCCCCCCCCCcHHHHHHHHHHhccCCCCCC---CHHHHHHHHH
Q 001103 1067 VDVYSFGIAMWEIITGEEPYANMHCGAIIGGIL--SNTLRPQIPERCDPEWRKLMEECWSFNPAARP---SFTEITNRLR 1141 (1157)
Q Consensus 1067 SDIWSLGVILYELLTGk~PF~g~~~eeil~~Il--~~~lrpeip~~iSpeLrdLIkrCLqkDPskRP---SaeELLe~Lr 1141 (1157)
+||||.|||||||+.|+.||-.....+....++ ...+.......++++..+||.++.. +++.|- .++++-.|.+
T Consensus 852 cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpf 930 (1034)
T KOG0608|consen 852 CDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPF 930 (1034)
T ss_pred chhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCcc
Confidence 999999999999999999998766554433332 2234445567799999999988664 566663 4566777766
Q ss_pred HHHHHHhhc
Q 001103 1142 VMSTALQTK 1150 (1157)
Q Consensus 1142 ~Lk~aLesk 1150 (1157)
+-...+...
T Consensus 931 FkgIDfssl 939 (1034)
T KOG0608|consen 931 FKGIDFSSL 939 (1034)
T ss_pred ccccchHhh
Confidence 554444443
No 382
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-32 Score=305.49 Aligned_cols=270 Identities=23% Similarity=0.369 Sum_probs=216.1
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|-++..||+|+|+.||++.+ ..+.||||+-....-+. .+..+.+.+...+|.+|-+.|+||.||++|++|.-+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~Wr-dEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslD- 539 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWR-DEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLD- 539 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchh-hHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeec-
Confidence 35677889999999999999987 45679999866543332 334456778889999999999999999999999764
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCC--ceeccCCccceeeccCCCCCCeEEEEec
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKN--IVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkG--IIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
...+|.|+|||+|.+|..+|+.+. .++++.++.|+.||+.||.||.+.. |||.||||.|||+- ++..-+.+||+||
T Consensus 540 tdsFCTVLEYceGNDLDFYLKQhk-lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv-~GtacGeIKITDF 617 (775)
T KOG1151|consen 540 TDSFCTVLEYCEGNDLDFYLKQHK-LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLV-NGTACGEIKITDF 617 (775)
T ss_pred cccceeeeeecCCCchhHHHHhhh-hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEe-cCcccceeEeeec
Confidence 457899999999999999997654 5899999999999999999999885 99999999999996 3336688999999
Q ss_pred CCcccccCCc--------ccCCCCCCCcccCcccccC--CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-HHHHH-
Q 001103 1030 GLSRIKCNTL--------VSGGVRGTLPWMAPELLNG--SNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-AIIGG- 1097 (1157)
Q Consensus 1030 GLAkl~~~~~--------~sts~~GTp~YmAPEVL~G--~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-eil~~- 1097 (1157)
|+++.+.... .+.-..||.+|++||.+-- .+.+++.|+||||+|||+|.++.|+.||...... ++++.
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN 697 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN 697 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence 9998754321 2334679999999997642 3567899999999999999999999999875533 22222
Q ss_pred -hhh-cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1098 -ILS-NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1098 -Il~-~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
|+. ....++....++.+.++||++||++..+.|..+.+|..+...+....
T Consensus 698 TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh~r 749 (775)
T KOG1151|consen 698 TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPHIR 749 (775)
T ss_pred chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccchhh
Confidence 111 12223344568999999999999999999999999998877665443
No 383
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-31 Score=298.44 Aligned_cols=261 Identities=23% Similarity=0.272 Sum_probs=206.7
Q ss_pred cccccccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC--C----
Q 001103 867 YGLQIIKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH--P---- 938 (1157)
Q Consensus 867 y~i~~I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H--P---- 938 (1157)
|....+...+|+++..||+|.||.|..+.++ +..||||+++.. ..+.+...-|+++|+++.+ |
T Consensus 81 ~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---------~kYreAa~iEi~vLqki~~~DP~g~~ 151 (415)
T KOG0671|consen 81 YQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---------DKYREAALIEIEVLQKINESDPNGKF 151 (415)
T ss_pred EEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---------HHHhhHHHHHHHHHHHHHhcCCCCce
Confidence 4444555689999999999999999999874 567999998864 2334556679999999942 2
Q ss_pred ceeEEeeeeecCCCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccC
Q 001103 939 NVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLR 1017 (1157)
Q Consensus 939 NIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~d 1017 (1157)
-+|++.+||.. .+++|||+|.+ |.+++++|+.+ ..+++..+++.+++||+.+++|||+.+++|.||||||||+...
T Consensus 152 rcv~m~~wFdy--rghiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss 228 (415)
T KOG0671|consen 152 RCVQMRDWFDY--RGHICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSS 228 (415)
T ss_pred EEEeeehhhhc--cCceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEecc
Confidence 37788888877 78999999988 56999999874 4779999999999999999999999999999999999998522
Q ss_pred C----------------CCCCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc
Q 001103 1018 D----------------PQRPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT 1081 (1157)
Q Consensus 1018 d----------------~e~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT 1081 (1157)
. .+...|||+|||.|+...... ...+.|..|.|||++.|. .++.++||||+||||+||.+
T Consensus 229 ~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~h--s~iVsTRHYRAPEViLgL--GwS~pCDvWSiGCIL~Elyt 304 (415)
T KOG0671|consen 229 EYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEHH--STIVSTRHYRAPEVILGL--GWSQPCDVWSIGCILVELYT 304 (415)
T ss_pred ceEEEeccCCccceeccCCCcceEEEecCCcceeccCc--ceeeeccccCCchheecc--CcCCccCceeeeeEEEEeec
Confidence 1 235679999999998765544 447789999999999976 68999999999999999999
Q ss_pred CCCCCCCCChhH---HHHHhhhcCCC-----------------CCCCC-------------------------CCcHHHH
Q 001103 1082 GEEPYANMHCGA---IIGGILSNTLR-----------------PQIPE-------------------------RCDPEWR 1116 (1157)
Q Consensus 1082 Gk~PF~g~~~ee---il~~Il~~~lr-----------------peip~-------------------------~iSpeLr 1116 (1157)
|...|+...+.+ +++.|+. .++ ..++. ....+|.
T Consensus 305 G~~LFqtHen~EHLaMMerIlG-p~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~Lf 383 (415)
T KOG0671|consen 305 GETLFQTHENLEHLAMMERILG-PIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLF 383 (415)
T ss_pred cceecccCCcHHHHHHHHHhhC-CCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHH
Confidence 999999877554 2233321 100 00010 0123478
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+||++||..||.+|+|+.|++.+..+-.
T Consensus 384 DLl~~mL~fDP~~RiTl~EAL~HpFF~~ 411 (415)
T KOG0671|consen 384 DLLRRMLEFDPARRITLREALSHPFFAR 411 (415)
T ss_pred HHHHHHHccCccccccHHHHhcCHHhhc
Confidence 9999999999999999999999987643
No 384
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=2.9e-31 Score=272.96 Aligned_cols=253 Identities=25% Similarity=0.367 Sum_probs=207.9
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCC
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~ 953 (1157)
.|...++||+|.||+||+++.+ +..||+|+++...- .+.......+|+-+|+.|+|.|||+++++... +.
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddd------degvpssalreicllkelkhknivrl~dvlhs--dk 74 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDD------DEGVPSSALREICLLKELKHKNIVRLHDVLHS--DK 74 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCC------CCCCcHHHHHHHHHHHHhhhcceeehhhhhcc--Cc
Confidence 4566788999999999999874 56699999886421 12223566799999999999999999999877 56
Q ss_pred cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 954 TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 954 ~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.+-+|+|||.. +|..+.....+.++.+.++.++.|+++||.|+|++++.||||||.|+||+ .++.+||+|||+++
T Consensus 75 kltlvfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin----~ngelkladfglar 149 (292)
T KOG0662|consen 75 KLTLVFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLIN----RNGELKLADFGLAR 149 (292)
T ss_pred eeEEeHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEec----cCCcEEecccchhh
Confidence 78999999965 88888877777799999999999999999999999999999999999999 88999999999998
Q ss_pred cccCCc-ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcCCCC---CCC
Q 001103 1034 IKCNTL-VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNTLRP---QIP 1108 (1157)
Q Consensus 1034 l~~~~~-~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~lrp---eip 1108 (1157)
...-+. .....+-|.+|.+|.++.|. .-|+...|+||.|||+.|+.. |++.|++.+..+.+.+|....-.+ ++|
T Consensus 150 afgipvrcysaevvtlwyrppdvlfga-kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wp 228 (292)
T KOG0662|consen 150 AFGIPVRCYSAEVVTLWYRPPDVLFGA-KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWP 228 (292)
T ss_pred hcCCceEeeeceeeeeeccCcceeeee-ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCC
Confidence 765554 34456789999999999986 368999999999999999987 888899999888887775321111 011
Q ss_pred ------------------------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1109 ------------------------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1109 ------------------------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
..+...-++|++++|..+|.+|.++++.+++..+
T Consensus 229 s~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqhpyf 286 (292)
T KOG0662|consen 229 SMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQHPYF 286 (292)
T ss_pred ccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcCccc
Confidence 1123345789999999999999999999987653
No 385
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=2.8e-30 Score=305.50 Aligned_cols=256 Identities=18% Similarity=0.183 Sum_probs=171.1
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEEC------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWR------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYG 945 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~k------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLyg 945 (1157)
+..++|++.+.||+|+||.||+|++. +..||||++.... ..+ ....| .++...+.+++.++.
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~------~~e----~~~~e--~l~~~~~~~~~~~~~ 196 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYG------AVE----IWMNE--RVRRACPNSCADFVY 196 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccc------hhH----HHHHH--HHHhhchhhHHHHHH
Confidence 34578999999999999999999984 5679999876431 111 11111 112222222222221
Q ss_pred ee----ecCCCCcEEEEEEeecCCcchhhhcccccc-------------------ccHHHHHHHHHHHHHHHHHHHHCCc
Q 001103 946 VV----PNGPGGTMATVTEYMVNGSLRHVLARKDRI-------------------LDRRKKLMLMMDAAFGMEYLHMKNI 1002 (1157)
Q Consensus 946 vf----~de~~~~LyLVMEYmeGGSL~dlLkr~gr~-------------------L~e~qVlkIa~QLa~ALeYLHSkGI 1002 (1157)
.+ .......+++||||+.+++|.+++...... .....+..++.||+.||.|||+++|
T Consensus 197 ~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gI 276 (566)
T PLN03225 197 GFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGI 276 (566)
T ss_pred hhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCE
Confidence 11 112355789999999999999888643211 1234466789999999999999999
Q ss_pred eeccCCccceeeccCCCCCCeEEEEecCCcccccC--CcccCCCCCCCcccCcccccCCCC-------------------
Q 001103 1003 VHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCN--TLVSGGVRGTLPWMAPELLNGSNN------------------- 1061 (1157)
Q Consensus 1003 IHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~--~~~sts~~GTp~YmAPEVL~G~~~------------------- 1061 (1157)
+||||||+|||++. ..+.+||+|||+|+.... ......+++|+.|+|||.+....+
T Consensus 277 iHRDLKP~NILl~~---~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~ 353 (566)
T PLN03225 277 VHRDVKPQNIIFSE---GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQ 353 (566)
T ss_pred EeCcCCHHHEEEeC---CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhcc
Confidence 99999999999972 346899999999975432 222345679999999997643211
Q ss_pred -CCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhh-c-------------CCCCC------CCCCCcHHHHHHHH
Q 001103 1062 -RVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILS-N-------------TLRPQ------IPERCDPEWRKLME 1120 (1157)
Q Consensus 1062 -~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~-~-------------~lrpe------ip~~iSpeLrdLIk 1120 (1157)
.+..++|||||||+||||+++..|+... ...+..++. . ..... +.........+||.
T Consensus 354 ~~~~~k~DVwSlGviL~el~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~ 431 (566)
T PLN03225 354 LNLPDRFDIYSAGLIFLQMAFPNLRSDSN--LIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLK 431 (566)
T ss_pred ccCCCCcccHHHHHHHHHHHhCcCCCchH--HHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHH
Confidence 2345679999999999999987765432 111111111 0 00000 00112234558999
Q ss_pred HHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1121 ECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1121 rCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
+||++||.+|||++++++|.+...
T Consensus 432 ~mL~~dP~kR~ta~e~L~Hpff~~ 455 (566)
T PLN03225 432 SMMRFKGRQRISAKAALAHPYFDR 455 (566)
T ss_pred HHccCCcccCCCHHHHhCCcCcCC
Confidence 999999999999999999987643
No 386
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.8e-29 Score=295.55 Aligned_cols=267 Identities=19% Similarity=0.183 Sum_probs=186.6
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE------------------CCceEEEEEEecccccCCChhH------HHHHHHHHHH
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW------------------RGTDIAIKRIKKSCFLGRSSEQ------EWLIKEFWRE 928 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~------------------kGt~VAVKVIkk~~l~~r~~e~------e~likqflrE 928 (1157)
..++|++.++||+|+||+||+|.+ .++.||||+++........... ....+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 457899999999999999999864 2456999998653110000000 0011233457
Q ss_pred HHHHHhCCCCce-----eEEeeeeecC------CCCcEEEEEEeecCCcchhhhcccc----------------------
Q 001103 929 AHIISNLHHPNV-----VAFYGVVPNG------PGGTMATVTEYMVNGSLRHVLARKD---------------------- 975 (1157)
Q Consensus 929 IkILK~L~HPNI-----VkLygvf~de------~~~~LyLVMEYmeGGSL~dlLkr~g---------------------- 975 (1157)
+.++.+++|.++ +++++++... ..+..++||||+.+++|.+++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888876654 5666666432 1346899999999999998886321
Q ss_pred -ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCcccCC--CCCCCcccC
Q 001103 976 -RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLVSGG--VRGTLPWMA 1052 (1157)
Q Consensus 976 -r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~sts--~~GTp~YmA 1052 (1157)
..+++..++.++.|++.+|.|||+++|+||||||+|||++ .++.+||+|||++........... ..+|+.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~----~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT----VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC----CCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 1235667888999999999999999999999999999998 667899999999975433222222 235889999
Q ss_pred cccccCCC--------------------CCCCchhHHHHHHHHHHHHHcCCC-CCCCCChhH-----------HHHHhhh
Q 001103 1053 PELLNGSN--------------------NRVSEKVDVYSFGIAMWEIITGEE-PYANMHCGA-----------IIGGILS 1100 (1157)
Q Consensus 1053 PEVL~G~~--------------------~~yS~KSDIWSLGVILYELLTGk~-PF~g~~~ee-----------il~~Il~ 1100 (1157)
||.+.... +....+.|+||+||+||+|++|.+ ||....... ....+..
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 99875321 111234799999999999999986 775422111 1111111
Q ss_pred cCCCCCCCCCCcHHHHHHHHHHhccCC---CCCCCHHHHHHHHHHH
Q 001103 1101 NTLRPQIPERCDPEWRKLMEECWSFNP---AARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1101 ~~lrpeip~~iSpeLrdLIkrCLqkDP---skRPSaeELLe~Lr~L 1143 (1157)
..+........++..++||.+||.++| .+|+|++++|+|.|+.
T Consensus 459 ~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~ 504 (507)
T PLN03224 459 QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFL 504 (507)
T ss_pred cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcC
Confidence 223333445678999999999999876 6899999999998763
No 387
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=6.6e-32 Score=288.29 Aligned_cols=263 Identities=24% Similarity=0.328 Sum_probs=206.1
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de 950 (1157)
....|+.+.+||+|.||.||+|+.+ |+.||+|++...... +-.-...++|+++|+.|+|+|++.++.++...
T Consensus 15 ~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK------eGfpitalreikiL~~lkHenv~nliEic~tk 88 (376)
T KOG0669|consen 15 EVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK------EGFPITALREIKILQLLKHENVVNLIEICRTK 88 (376)
T ss_pred cchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc------cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhc
Confidence 3456788899999999999999874 566888765432111 11123456899999999999999998887532
Q ss_pred ------CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeE
Q 001103 951 ------PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPIC 1024 (1157)
Q Consensus 951 ------~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~V 1024 (1157)
....+|+||++|+. +|.-+|......++...+.+++.++..||.|+|...|+|||+|++|+||+ .++.+
T Consensus 89 ~Tp~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt----~dgil 163 (376)
T KOG0669|consen 89 ATPTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT----KDGIL 163 (376)
T ss_pred cCCcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc----CCceE
Confidence 23469999999987 88888887767799999999999999999999999999999999999999 78899
Q ss_pred EEEecCCcccccC-----CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhh
Q 001103 1025 KVGDFGLSRIKCN-----TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGIL 1099 (1157)
Q Consensus 1025 KLiDFGLAkl~~~-----~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il 1099 (1157)
||+|||+++.... ....+..+-|.+|++||.+.|. ..|+.+.|||+.|||+.||+++.+.|.+......+..|.
T Consensus 164 klADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~-r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is 242 (376)
T KOG0669|consen 164 KLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGD-REYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLIS 242 (376)
T ss_pred EeeccccccceecccccCCCCcccceeeeecCCHHHhhcc-cccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHH
Confidence 9999999964322 2234455679999999999986 578999999999999999999999998877655444432
Q ss_pred h--cCCCCC------------------CCC-------------CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1100 S--NTLRPQ------------------IPE-------------RCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1100 ~--~~lrpe------------------ip~-------------~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
. +...++ ++. .-+++..+|+..||..||.+|+++++.+++.++.+..
T Consensus 243 ~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 243 QLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred HHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 1 111111 111 1135677999999999999999999999998877654
Q ss_pred H
Q 001103 1147 L 1147 (1157)
Q Consensus 1147 L 1147 (1157)
.
T Consensus 323 ~ 323 (376)
T KOG0669|consen 323 M 323 (376)
T ss_pred c
Confidence 3
No 388
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.3e-29 Score=281.98 Aligned_cols=273 Identities=21% Similarity=0.279 Sum_probs=205.9
Q ss_pred HHHHhhcccc---ccc-ccCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHH
Q 001103 859 MAEMEAGIYG---LQI-IKDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHII 932 (1157)
Q Consensus 859 l~e~ea~~y~---i~~-I~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkIL 932 (1157)
..++..+.|. +.. +...+|.++++||+|.|++||++.+. .+.||+|+.+.. +.+.+..+.|+++|
T Consensus 58 ~~dY~kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---------qhYtEaAlDEIklL 128 (590)
T KOG1290|consen 58 PEDYRKGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---------QHYTEAALDEIKLL 128 (590)
T ss_pred hhhhhcCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---------hHHHHHHHHHHHHH
Confidence 3445555553 333 34489999999999999999999884 566999998853 44567778999999
Q ss_pred HhCC-----C---CceeEEeeeeec--CCCCcEEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHC-
Q 001103 933 SNLH-----H---PNVVAFYGVVPN--GPGGTMATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMK- 1000 (1157)
Q Consensus 933 K~L~-----H---PNIVkLygvf~d--e~~~~LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSk- 1000 (1157)
+++. | .+||+|++.|.. ..+.++|||+|++ |.+|..+|+.. -+.++...+..|++|++.||.|||.+
T Consensus 129 ~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec 207 (590)
T KOG1290|consen 129 QQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC 207 (590)
T ss_pred HHHHhcCCCCCCCceeeeeeccceecCCCCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc
Confidence 9983 3 479999999964 3355899999998 66888888764 46799999999999999999999976
Q ss_pred CceeccCCccceeeccCC--------------------------------------------------------------
Q 001103 1001 NIVHFDLKCDNLLVNLRD-------------------------------------------------------------- 1018 (1157)
Q Consensus 1001 GIIHRDLKPENILLd~dd-------------------------------------------------------------- 1018 (1157)
||||.||||+|||+...+
T Consensus 208 gIIHTDlKPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~ 287 (590)
T KOG1290|consen 208 GIIHTDLKPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEAS 287 (590)
T ss_pred CccccCCCcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhh
Confidence 999999999999982210
Q ss_pred ----------------------------------C--------------C------------------------------
Q 001103 1019 ----------------------------------P--------------Q------------------------------ 1020 (1157)
Q Consensus 1019 ----------------------------------~--------------e------------------------------ 1020 (1157)
+ .
T Consensus 288 l~~~~~~~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s 367 (590)
T KOG1290|consen 288 LAGLEGIEEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSS 367 (590)
T ss_pred hcccccccccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccC
Confidence 0 0
Q ss_pred ----------------------CCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHH
Q 001103 1021 ----------------------RPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWE 1078 (1157)
Q Consensus 1021 ----------------------~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYE 1078 (1157)
.-.|||+|||.|.......+. ..-|..|+|||++.|. .|+..+||||++|++||
T Consensus 368 ~~s~~~~~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khFT~--DIQTRQYRapEVllGs--gY~~~ADiWS~AC~~FE 443 (590)
T KOG1290|consen 368 PSSPGTIASNPLVNPDIPLPECDIRVKIADLGNACWVHKHFTE--DIQTRQYRAPEVLLGS--GYSTSADIWSTACMAFE 443 (590)
T ss_pred cCCccccccccccCCCCCCCccceeEEEeeccchhhhhhhhch--hhhhhhccCcceeecC--CCCCchhHHHHHHHHHH
Confidence 014788888888765544333 4578899999999987 57899999999999999
Q ss_pred HHcCCCCCCCCCh------hHHHHHhhh------------cC-----------CC----C-------------CCCCCCc
Q 001103 1079 IITGEEPYANMHC------GAIIGGILS------------NT-----------LR----P-------------QIPERCD 1112 (1157)
Q Consensus 1079 LLTGk~PF~g~~~------eeil~~Il~------------~~-----------lr----p-------------eip~~iS 1112 (1157)
|+||...|..... ++.+..|+. +. ++ . .++..-.
T Consensus 444 LaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~eKY~~s~e~A 523 (590)
T KOG1290|consen 444 LATGDYLFEPHSGENYSRDEDHIALIMELLGKIPRKIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIEKYEWSEEDA 523 (590)
T ss_pred hhcCceeecCCCCCCCCccHHHHHHHHHHHhhccHHHHhcCcchHhhhccccceecccccCCCcHHHHHHHHhCCCHHHH
Confidence 9999998864322 222222221 00 00 0 1112223
Q ss_pred HHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1113 PEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1113 peLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
.++.+|+.-||+++|++|||+.+.+++.|....
T Consensus 524 ~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~~ 556 (590)
T KOG1290|consen 524 QQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNPV 556 (590)
T ss_pred HHHHHHHHHHHhcCccccccHHHHhcCccccCC
Confidence 568899999999999999999999999987643
No 389
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=6.8e-30 Score=301.36 Aligned_cols=258 Identities=31% Similarity=0.548 Sum_probs=216.6
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEE--CCc----eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKW--RGT----DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYG 945 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~--kGt----~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLyg 945 (1157)
.+..+....++||+|+||+||+|.| +|. +||||++..... .....+++.|+-+|.+|+|||++++++
T Consensus 693 ~kEtelkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~-------~~~s~e~LdeAl~masldHpnl~RLLg 765 (1177)
T KOG1025|consen 693 LKETELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS-------PKASIELLDEALRMASLDHPNLLRLLG 765 (1177)
T ss_pred chhhhhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC-------chhhHHHHHHHHHHhcCCCchHHHHhh
Confidence 3444556678999999999999998 443 489998876422 112467889999999999999999999
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEE
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
++... .+.||++||++|.|.++++.++..+..+..+.|..||++||.|||.++++||||-..|||+. +-.++|
T Consensus 766 vc~~s---~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVk----sP~hvk 838 (1177)
T KOG1025|consen 766 VCMLS---TLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVK----SPNHVK 838 (1177)
T ss_pred hcccc---hHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeec----CCCeEE
Confidence 99874 37889999999999999998888899999999999999999999999999999999999998 777999
Q ss_pred EEecCCcccccCCcc---cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhc
Q 001103 1026 VGDFGLSRIKCNTLV---SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSN 1101 (1157)
Q Consensus 1026 LiDFGLAkl~~~~~~---sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~ 1101 (1157)
|.|||+++....... ..+..-.+.|||-|.+.. ..|+.++||||+||++||+|| |..|+.+....++-. ++..
T Consensus 839 itdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~--~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~d-lle~ 915 (1177)
T KOG1025|consen 839 ITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRI--RKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPD-LLEK 915 (1177)
T ss_pred EEecchhhccCcccccccccccccCcHHHHHHHhhc--cCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhH-HHhc
Confidence 999999997554332 222334567999998874 478999999999999999999 999999988766544 4445
Q ss_pred CCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1102 TLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1102 ~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
..+..-|..++.++.-++.+||..|+..||+++++...+..+...
T Consensus 916 geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ard 960 (1177)
T KOG1025|consen 916 GERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARD 960 (1177)
T ss_pred cccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcC
Confidence 556777888999999999999999999999999999988776643
No 390
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=5.4e-30 Score=271.05 Aligned_cols=257 Identities=20% Similarity=0.289 Sum_probs=209.6
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeec
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPN 949 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~d 949 (1157)
..++|++++++|+|.|+.||.|.. +...++||+++... .+++.||++||+.|. ||||++++++..+
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk-----------kkKIkREikIL~nL~gg~NIi~L~DiV~D 104 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK-----------KKKIKREIKILQNLRGGPNIIKLLDIVKD 104 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH-----------HHHHHHHHHHHHhccCCCCeeehhhhhcC
Confidence 457899999999999999999985 56779999998641 367899999999997 9999999999999
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
+......+|+||+++.+...+.. .+....++.++.|++.||.|||++||+|||+||.|++|+ .....++|+|+
T Consensus 105 p~SktpaLiFE~v~n~Dfk~ly~----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmId---h~~rkLrlIDW 177 (338)
T KOG0668|consen 105 PESKTPSLIFEYVNNTDFKQLYP----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMID---HELRKLRLIDW 177 (338)
T ss_pred ccccCchhHhhhhccccHHHHhh----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeec---hhhceeeeeec
Confidence 88888899999999988766653 366778899999999999999999999999999999998 56778999999
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCC-CCChhHHHHHhhh--------
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYA-NMHCGAIIGGILS-------- 1100 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~-g~~~eeil~~Il~-------- 1100 (1157)
|+|.+........-.+.+..|--||.+-.. ..|+..-|+|||||+|..|+..+.||- +.++.+.+..|..
T Consensus 178 GLAEFYHp~~eYnVRVASRyfKGPELLVdy-~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~ 256 (338)
T KOG0668|consen 178 GLAEFYHPGKEYNVRVASRYFKGPELLVDY-QMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELY 256 (338)
T ss_pred chHhhcCCCceeeeeeehhhcCCchheeec-hhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHH
Confidence 999987766665556678889999998753 457888999999999999999999974 3344333333321
Q ss_pred -------cCCCC--------------------CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHh
Q 001103 1101 -------NTLRP--------------------QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQ 1148 (1157)
Q Consensus 1101 -------~~lrp--------------------eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLe 1148 (1157)
-.+.+ .-....++++.+|+.++|..|-.+|+|+++.+.|..+....-.
T Consensus 257 ~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~~~ 331 (338)
T KOG0668|consen 257 AYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVREA 331 (338)
T ss_pred HHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcCchHHHHHHH
Confidence 00111 1112256899999999999999999999999999887765433
No 391
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=2.4e-28 Score=236.12 Aligned_cols=211 Identities=38% Similarity=0.648 Sum_probs=181.0
Q ss_pred ecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEE
Q 001103 883 LGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTE 960 (1157)
Q Consensus 883 LGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVME 960 (1157)
||+|.+|.||+++.. +..+++|++....... ....+.+|++.++.+.|++|+++++++.. ....+++||
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~--~~~~~~~~e 71 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-------LLEELLREIEILKKLNHPNIVKLYGVFED--ENHLYLVME 71 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-------HHHHHHHHHHHHHhcCCCCeeeEeeeeec--CCeEEEEEe
Confidence 689999999999996 7889999988652111 24678899999999999999999999887 468899999
Q ss_pred eecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCC-CCeEEEEecCCcccccCCc
Q 001103 961 YMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQ-RPICKVGDFGLSRIKCNTL 1039 (1157)
Q Consensus 961 YmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e-~g~VKLiDFGLAkl~~~~~ 1039 (1157)
++.+++|.+++......+++..++.++.+++.+|.+||++|++|+||+|.||+++ . .+.++|+|||.+.......
T Consensus 72 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~----~~~~~~~l~d~~~~~~~~~~~ 147 (215)
T cd00180 72 YCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLD----SDNGKVKLADFGLSKLLTSDK 147 (215)
T ss_pred cCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEe----CCCCcEEEecCCceEEccCCc
Confidence 9999999999876534588999999999999999999999999999999999998 4 6789999999987654432
Q ss_pred -ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHH
Q 001103 1040 -VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKL 1118 (1157)
Q Consensus 1040 -~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdL 1118 (1157)
......+...|++||.+... ..++.+.|+|+||+++++| ..+.++
T Consensus 148 ~~~~~~~~~~~~~~pe~~~~~-~~~~~~~D~~~lg~~~~~l---------------------------------~~~~~~ 193 (215)
T cd00180 148 SLLKTIVGTPAYMAPEVLLGK-GYYSEKSDIWSLGVILYEL---------------------------------PELKDL 193 (215)
T ss_pred chhhcccCCCCccChhHhccc-CCCCchhhhHHHHHHHHHH---------------------------------HHHHHH
Confidence 12235588899999998753 2568899999999999999 688999
Q ss_pred HHHHhccCCCCCCCHHHHHHHH
Q 001103 1119 MEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1119 IkrCLqkDPskRPSaeELLe~L 1140 (1157)
+.+|++.+|.+||++.++++++
T Consensus 194 l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 194 IRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHHHhhCCcccCcCHHHHhhCC
Confidence 9999999999999999998754
No 392
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.96 E-value=3.2e-30 Score=293.77 Aligned_cols=257 Identities=22% Similarity=0.324 Sum_probs=208.8
Q ss_pred ccccccCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC------CCc
Q 001103 868 GLQIIKDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH------HPN 939 (1157)
Q Consensus 868 ~i~~I~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~------HPN 939 (1157)
.+.++-..+|.+....|+|-|++|.+|++ .|..||||+|.... ...+.-++|++||++|+ --+
T Consensus 425 ~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE---------~M~KtGl~EleiLkKL~~AD~Edk~H 495 (752)
T KOG0670|consen 425 RIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE---------VMHKTGLKELEILKKLNDADPEDKFH 495 (752)
T ss_pred ehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch---------HHhhhhhHHHHHHHHhhccCchhhhH
Confidence 45566778999999999999999999998 47789999999863 33456678999999996 247
Q ss_pred eeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccc--cccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccC
Q 001103 940 VVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDR--ILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLR 1017 (1157)
Q Consensus 940 IVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr--~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~d 1017 (1157)
+++|+..|.. .+++|||+|.+. .+|.++|++.++ .|....+..++.||..||+.|...||+|.||||+|||++
T Consensus 496 clrl~r~F~h--knHLClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN-- 570 (752)
T KOG0670|consen 496 CLRLFRHFKH--KNHLCLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN-- 570 (752)
T ss_pred HHHHHHHhhh--cceeEEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--
Confidence 8899988887 779999999884 489999988653 377889999999999999999999999999999999998
Q ss_pred CCCCCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHH
Q 001103 1018 DPQRPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGG 1097 (1157)
Q Consensus 1018 d~e~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~ 1097 (1157)
+....+||||||.|........+ .+.-+..|.|||++.|. .|+...|+||+||+||||.||+..|++..+..++..
T Consensus 571 -E~k~iLKLCDfGSA~~~~eneit-PYLVSRFYRaPEIiLG~--~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl 646 (752)
T KOG0670|consen 571 -ESKNILKLCDFGSASFASENEIT-PYLVSRFYRAPEIILGL--PYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRL 646 (752)
T ss_pred -cCcceeeeccCcccccccccccc-HHHHHHhccCcceeecC--cccCCccceeeceeeEEeeccceecCCCCcHHHHHH
Confidence 46778999999999876655443 34567789999999987 467789999999999999999999999877665544
Q ss_pred hhhc--CCCC-----------------------------------------------------CCCCC---CcHHHHHHH
Q 001103 1098 ILSN--TLRP-----------------------------------------------------QIPER---CDPEWRKLM 1119 (1157)
Q Consensus 1098 Il~~--~lrp-----------------------------------------------------eip~~---iSpeLrdLI 1119 (1157)
.+.. .++. .++.. .-.+|++|+
T Consensus 647 ~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLL 726 (752)
T KOG0670|consen 647 FMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLL 726 (752)
T ss_pred HHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHH
Confidence 4321 1100 00000 114588999
Q ss_pred HHHhccCCCCCCCHHHHHHHHHH
Q 001103 1120 EECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1120 krCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
..||.+||++|.|..+.|.|+.+
T Consensus 727 dkml~LdP~KRit~nqAL~HpFi 749 (752)
T KOG0670|consen 727 DKMLILDPEKRITVNQALKHPFI 749 (752)
T ss_pred HHHhccChhhcCCHHHHhcCCcc
Confidence 99999999999999999988654
No 393
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.6e-29 Score=279.01 Aligned_cols=255 Identities=33% Similarity=0.581 Sum_probs=203.7
Q ss_pred CCCeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHh--CCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISN--LHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~--L~HPNIVkLygvf~de~ 951 (1157)
..+..+++.||+|.||.||+|+|+|..||||++.... ...+.||.+|++. |+|+||+.+++.-..+.
T Consensus 210 arqI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd-----------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~ 278 (513)
T KOG2052|consen 210 ARQIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD-----------ERSWFRETEIYQTVMLRHENILGFIAADNKDN 278 (513)
T ss_pred hheeEEEEEecCccccceeeccccCCceEEEEecccc-----------hhhhhhHHHHHHHHHhccchhhhhhhccccCC
Confidence 4678899999999999999999999999999987541 2456788888885 48999999997754432
Q ss_pred --CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHC--------CceeccCCccceeeccCCCCC
Q 001103 952 --GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMK--------NIVHFDLKCDNLLVNLRDPQR 1021 (1157)
Q Consensus 952 --~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSk--------GIIHRDLKPENILLd~dd~e~ 1021 (1157)
-..+|||.+|-+.|+|+++|.+ ..++....++++..++.||++||.. .|.|||||..|||+. ++
T Consensus 279 gs~TQLwLvTdYHe~GSL~DyL~r--~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK----kn 352 (513)
T KOG2052|consen 279 GSWTQLWLVTDYHEHGSLYDYLNR--NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK----KN 352 (513)
T ss_pred CceEEEEEeeecccCCcHHHHHhh--ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc----cC
Confidence 2368999999999999999987 4488899999999999999999964 399999999999999 88
Q ss_pred CeEEEEecCCcccccCC-----cccCCCCCCCcccCcccccCCCCC----CCchhHHHHHHHHHHHHHcC----------
Q 001103 1022 PICKVGDFGLSRIKCNT-----LVSGGVRGTLPWMAPELLNGSNNR----VSEKVDVYSFGIAMWEIITG---------- 1082 (1157)
Q Consensus 1022 g~VKLiDFGLAkl~~~~-----~~sts~~GTp~YmAPEVL~G~~~~----yS~KSDIWSLGVILYELLTG---------- 1082 (1157)
+.+.|+|+|||...... ......+||..|||||++...-+. .-..+||||||+++||++-.
T Consensus 353 ~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey 432 (513)
T KOG2052|consen 353 GTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEY 432 (513)
T ss_pred CcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhh
Confidence 99999999999754332 123456899999999998642110 11358999999999998762
Q ss_pred CCCCCCCC-----hhHHHHHhhhcCCCCCCCCCCc--H---HHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1083 EEPYANMH-----CGAIIGGILSNTLRPQIPERCD--P---EWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1083 k~PF~g~~-----~eeil~~Il~~~lrpeip~~iS--p---eLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
++||.+.. .+++..-+-...++|.+|..+. + .+.+||+.||..+|.-|-|+-.|-+.|.++..
T Consensus 433 ~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 433 QLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred cCCcccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 57886532 2344444556678888776653 2 36689999999999999999999888888774
No 394
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=8.6e-29 Score=280.90 Aligned_cols=260 Identities=27% Similarity=0.436 Sum_probs=207.3
Q ss_pred cCCCeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHh--CCCCceeEEeeeeecC
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISN--LHHPNVVAFYGVVPNG 950 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~--L~HPNIVkLygvf~de 950 (1157)
.....+.++.||+|.||.||+|+++++.||||++... ..+.+..|.+|++. ++|+||+++++.-...
T Consensus 208 ~l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~~-----------~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~ 276 (534)
T KOG3653|consen 208 ELDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPEQ-----------EKQSFQNEKNIYSLPGMKHENILQFIGAEKRG 276 (534)
T ss_pred cCCchhhHHHhhcCccceeehhhccCceeEEEecCHH-----------HHHHHHhHHHHHhccCccchhHHHhhchhccC
Confidence 3455677889999999999999999999999998753 24678888888875 5899999998874432
Q ss_pred C--CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHC---------CceeccCCccceeeccCCC
Q 001103 951 P--GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMK---------NIVHFDLKCDNLLVNLRDP 1019 (1157)
Q Consensus 951 ~--~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSk---------GIIHRDLKPENILLd~dd~ 1019 (1157)
. ...++||++|.+.|+|.++|+.+- ++|....+++.-|++||+|||+- .|+|||||..|||+.
T Consensus 277 t~~~~eywLVt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK---- 350 (534)
T KOG3653|consen 277 TADRMEYWLVTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK---- 350 (534)
T ss_pred CccccceeEEeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc----
Confidence 2 336899999999999999998654 78999999999999999999974 399999999999998
Q ss_pred CCCeEEEEecCCcccccCC---cccCCCCCCCcccCcccccCCCC----CCCchhHHHHHHHHHHHHHcCC---------
Q 001103 1020 QRPICKVGDFGLSRIKCNT---LVSGGVRGTLPWMAPELLNGSNN----RVSEKVDVYSFGIAMWEIITGE--------- 1083 (1157)
Q Consensus 1020 e~g~VKLiDFGLAkl~~~~---~~sts~~GTp~YmAPEVL~G~~~----~yS~KSDIWSLGVILYELLTGk--------- 1083 (1157)
++....|+|||+|...... ....+.+||..|||||++.|.-+ ..-.+.||||+|.+||||++.-
T Consensus 351 ~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp 430 (534)
T KOG3653|consen 351 NDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVP 430 (534)
T ss_pred cCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCC
Confidence 7889999999999764432 22344789999999999987422 1224689999999999999853
Q ss_pred ---CCCCC-----CChhHHHHHhhhcCCCCCCCCCC-----cHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHhh
Q 001103 1084 ---EPYAN-----MHCGAIIGGILSNTLRPQIPERC-----DPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQT 1149 (1157)
Q Consensus 1084 ---~PF~g-----~~~eeil~~Il~~~lrpeip~~i-----SpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLes 1149 (1157)
+||.. ...+++...++....+|.++..+ ...+++.+..||..|++-|-|+.=+.++++.+....+.
T Consensus 431 ~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 431 EYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred cccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 34431 11234445556677788777543 35688999999999999999999999999998876543
No 395
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=2.7e-29 Score=298.17 Aligned_cols=241 Identities=27% Similarity=0.451 Sum_probs=185.8
Q ss_pred EEecccCcEE-EEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCCCCcEEEE
Q 001103 881 QELGSGTFGT-VYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGPGGTMATV 958 (1157)
Q Consensus 881 rkLGsGsFGt-VYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~~~~LyLV 958 (1157)
+.+|.|+-|+ ||+|...|+.||||++-... .....+|+..|+.- +|||||++|+.-.+ ...+||.
T Consensus 515 eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e~-----------~~~A~rEi~lL~eSD~H~NviRyyc~E~d--~qF~YIa 581 (903)
T KOG1027|consen 515 EILGYGSNGTVVFRGVYEGREVAVKRLLEEF-----------FDFAQREIQLLQESDEHPNVIRYYCSEQD--RQFLYIA 581 (903)
T ss_pred HHcccCCCCcEEEEEeeCCceehHHHHhhHh-----------HHHHHHHHHHHHhccCCCceEEEEeeccC--CceEEEE
Confidence 5589999886 88999999999999876542 24567899999988 69999999887555 7799999
Q ss_pred EEeecCCcchhhhccccccccH---HHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCC-CCCeEEEEecCCccc
Q 001103 959 TEYMVNGSLRHVLARKDRILDR---RKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDP-QRPICKVGDFGLSRI 1034 (1157)
Q Consensus 959 MEYmeGGSL~dlLkr~gr~L~e---~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~-e~g~VKLiDFGLAkl 1034 (1157)
.|.|.. +|.+++...+...+. ...+.+..|++.||++||+.+||||||||.||||+..+. ....++|+|||+++.
T Consensus 582 lELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk 660 (903)
T KOG1027|consen 582 LELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK 660 (903)
T ss_pred ehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence 999966 999999764211111 234667899999999999999999999999999985432 346899999999997
Q ss_pred ccCCcc----cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcC-CCCCCCCChhHHHHHhhhcCCCC-CCC
Q 001103 1035 KCNTLV----SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITG-EEPYANMHCGAIIGGILSNTLRP-QIP 1108 (1157)
Q Consensus 1035 ~~~~~~----sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTG-k~PF~g~~~eeil~~Il~~~lrp-eip 1108 (1157)
...... ..+..||.+|+|||++.... -+.++|||||||++|+.++| .+||...-..+ ..|+.+.... .+.
T Consensus 661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~~--~~~avDiFslGCvfyYvltgG~HpFGd~~~R~--~NIl~~~~~L~~L~ 736 (903)
T KOG1027|consen 661 LAGGKSSFSRLSGGSGTSGWQAPEQLREDR--KTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ--ANILTGNYTLVHLE 736 (903)
T ss_pred cCCCcchhhcccCCCCcccccCHHHHhccc--cCcccchhhcCceEEEEecCCccCCCchHHhh--hhhhcCccceeeec
Confidence 544322 34567999999999998653 35689999999999999995 99998644322 2333332211 111
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
.....++++||.+|+..+|..||++.+++.|
T Consensus 737 ~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~H 767 (903)
T KOG1027|consen 737 PLPDCEAKDLISRMLNPDPQLRPSATDVLNH 767 (903)
T ss_pred cCchHHHHHHHHHhcCCCcccCCCHHHHhCC
Confidence 1112288999999999999999999999986
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-28 Score=257.51 Aligned_cols=215 Identities=28% Similarity=0.421 Sum_probs=175.7
Q ss_pred cCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeec
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPN 949 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~d 949 (1157)
...++..+..||+|+||.|-+.++ .|+-.|+|.+.... . ....+++++|+.+..+. .+|.+|++||.+..
T Consensus 44 ~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv--n-----~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~r 116 (282)
T KOG0984|consen 44 PADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV--N-----SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFR 116 (282)
T ss_pred chhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc--C-----hHHHHHHHHhhhhhccCCCCCeEEEeehhhhc
Confidence 345666778899999999988777 68889999988642 1 22346778888876655 79999999998776
Q ss_pred CCCCcEEEEEEeecCCcchhhhc---cccccccHHHHHHHHHHHHHHHHHHHHC-CceeccCCccceeeccCCCCCCeEE
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLA---RKDRILDRRKKLMLMMDAAFGMEYLHMK-NIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLk---r~gr~L~e~qVlkIa~QLa~ALeYLHSk-GIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
.+..+|.||.|.. +|..+.+ ++++.+++..+-+|+..++.||.|||++ .|||||+||.|||++ ..++||
T Consensus 117 --egdvwIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn----~~GqVK 189 (282)
T KOG0984|consen 117 --EGDVWICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILIN----YDGQVK 189 (282)
T ss_pred --cccEEEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEc----cCCcEE
Confidence 5679999999965 7755543 3567799999999999999999999987 899999999999999 778999
Q ss_pred EEecCCcccccCCcccCCCCCCCcccCcccccCC--CCCCCchhHHHHHHHHHHHHHcCCCCCCCC-ChhHHHHHhhhc
Q 001103 1026 VGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGS--NNRVSEKVDVYSFGIAMWEIITGEEPYANM-HCGAIIGGILSN 1101 (1157)
Q Consensus 1026 LiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~--~~~yS~KSDIWSLGVILYELLTGk~PF~g~-~~eeil~~Il~~ 1101 (1157)
+||||.+....+....+...|-..|||||++..+ ...|+.++||||||++++||.+++.||..- ...+.+.+++..
T Consensus 190 iCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 190 ICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred EcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 9999999888777766656788899999998753 236899999999999999999999999864 445666666544
No 397
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=4e-27 Score=235.00 Aligned_cols=205 Identities=34% Similarity=0.551 Sum_probs=171.4
Q ss_pred eeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
|.+.+.||+|++|+||++... +..+|+|.+...... ...+.+.+|++.++.++|+|++++++++.. ...
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-------~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~--~~~ 71 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-------KQREEFLREIRILKKLKHPNIVKLYGVFED--PEP 71 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-------HHHHHHHHHHHHHHhCCCCChhhheeeeec--CCc
Confidence 567889999999999999985 578999998865321 235678899999999999999999999876 467
Q ss_pred EEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 955 MATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
.++++||+.+++|.+++......+++..++.++.+++.+|.|||+++++|+||+|.||+++ ..+.++|+|||++..
T Consensus 72 ~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~----~~~~~~l~d~g~~~~ 147 (225)
T smart00221 72 LYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG----MDGLVKLADFGLARF 147 (225)
T ss_pred eEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc----CCCCEEEeeCceeeE
Confidence 8999999999999999876543378899999999999999999999999999999999998 568999999999886
Q ss_pred ccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCC-CChhHHH
Q 001103 1035 KCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYAN-MHCGAII 1095 (1157)
Q Consensus 1035 ~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g-~~~eeil 1095 (1157)
..... ......++..|++||.+. ....++.++|+|+||+++|+|++|+.||.. ......+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~pe~~~-~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~ 210 (225)
T smart00221 148 IHRDLAALLKTVKGTPFYLAPEVLL-GGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLL 210 (225)
T ss_pred ecCcccccccceeccCCcCCHhHhc-CCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHH
Confidence 54432 333456888999999984 334677899999999999999999999977 4444333
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=2.1e-28 Score=285.15 Aligned_cols=251 Identities=24% Similarity=0.382 Sum_probs=211.8
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|+.+.++|.|+||.||++++ ++...|||+++...-. ...-+.+|+-+++.++|||||.+++.+..
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--------d~~~iqqei~~~~dc~h~nivay~gsylr-- 83 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--------DFSGIQQEIGMLRDCRHPNIVAYFGSYLR-- 83 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc--------cccccccceeeeecCCCcChHHHHhhhhh--
Confidence 36899999999999999999998 4777999999875321 13556789999999999999999999877
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
...++|.||||.+|+|.++..-.+ ++++.++.+.+++.++||+|||++|=+|||||-.|||++ +.+.+||+|||.
T Consensus 84 ~dklwicMEycgggslQdiy~~Tg-plselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt----d~gDvklaDfgv 158 (829)
T KOG0576|consen 84 RDKLWICMEYCGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT----DEGDVKLADFGV 158 (829)
T ss_pred hcCcEEEEEecCCCcccceeeecc-cchhHHHHHHHhhhhccchhhhcCCcccccccccceeec----ccCceeecccCc
Confidence 557999999999999999886554 599999999999999999999999999999999999999 888999999999
Q ss_pred cccccCCc-ccCCCCCCCcccCccccc-CCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCC---
Q 001103 1032 SRIKCNTL-VSGGVRGTLPWMAPELLN-GSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQ--- 1106 (1157)
Q Consensus 1032 Akl~~~~~-~sts~~GTp~YmAPEVL~-G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpe--- 1106 (1157)
+....... ....+.||+.|||||+-. +....|...+|+|++|++..|+-.-++|-...+....+.-+....+.+.
T Consensus 159 saqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lk 238 (829)
T KOG0576|consen 159 SAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLK 238 (829)
T ss_pred hhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCccc
Confidence 87654432 345688999999999852 2345678899999999999999999999777776666666655544332
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
-+..+++.|.+|++.+|.++|.+||+++.+|.+
T Consensus 239 Dk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 239 DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred CCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 345689999999999999999999999999885
No 399
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.3e-28 Score=265.15 Aligned_cols=254 Identities=26% Similarity=0.375 Sum_probs=195.9
Q ss_pred CCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.+.+--+.||-|+||+||.+.+ +|+.||+|++.... ..-...+.+.+|+++|..++|.|++..+++.+-..-
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvf------q~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~ 126 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVF------QNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANP 126 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHH------HHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCc
Confidence 4556668899999999999887 68889999876531 112235788999999999999999998887654322
Q ss_pred C---cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 953 G---TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 953 ~---~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
. .+|.+.|.|.. +|..++-. .+.++...+.-++.||++||+|||+.+|.||||||.|+|++ .+-.+|||||
T Consensus 127 dfFqEiYV~TELmQS-DLHKIIVS-PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVN----SNCvLKICDF 200 (449)
T KOG0664|consen 127 SFFQELYVLTELMQS-DLHKIIVS-PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVN----SNCILKICDF 200 (449)
T ss_pred hHHHHHHHHHHHHHh-hhhheecc-CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEec----cCceEEeccc
Confidence 2 35777887744 77777654 44588888888999999999999999999999999999999 8889999999
Q ss_pred CCcccccCCc--ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc------
Q 001103 1030 GLSRIKCNTL--VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN------ 1101 (1157)
Q Consensus 1030 GLAkl~~~~~--~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~------ 1101 (1157)
|+++...... ..+..+-|-.|.|||+++|. ..|+..+||||+|||+.||+..+..|......+.++.|.+.
T Consensus 201 GLARvee~d~~~hMTqEVVTQYYRAPEiLMGa-RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~ 279 (449)
T KOG0664|consen 201 GLARTWDQRDRLNMTHEVVTQYYRAPELLMGA-RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQ 279 (449)
T ss_pred ccccccchhhhhhhHHHHHHHHhccHHHhhcc-hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcH
Confidence 9998654332 22334578899999999987 57999999999999999999999999877665555444321
Q ss_pred -----------------CCC-CCCC--------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1102 -----------------TLR-PQIP--------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1102 -----------------~lr-peip--------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
..+ +.++ ..-..+...++..||..||++|.+.++.+.++.
T Consensus 280 EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~~ 345 (449)
T KOG0664|consen 280 EAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHRY 345 (449)
T ss_pred HHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccccc
Confidence 111 1111 112345678899999999999999998887654
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=8e-28 Score=276.98 Aligned_cols=207 Identities=26% Similarity=0.384 Sum_probs=171.8
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC---CCceeEEeeee
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH---HPNVVAFYGVV 947 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~---HPNIVkLygvf 947 (1157)
+..+|..++.||.|+||.|++|.++ ...|+||.+.+.......=-.....-.+..|++||..|+ |+||++++++|
T Consensus 559 k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF 638 (772)
T KOG1152|consen 559 KFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF 638 (772)
T ss_pred ccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee
Confidence 4578999999999999999999985 445999998876443211000111234567999999998 99999999999
Q ss_pred ecCCCCcEEEEEEee-cCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 948 PNGPGGTMATVTEYM-VNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 948 ~de~~~~LyLVMEYm-eGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
++ ++++||+||.- +|-+|.+++..+. .+++..+..|++|++.|+++||++||||||||-+||.++ .+|-+||
T Consensus 639 Ed--dd~yyl~te~hg~gIDLFd~IE~kp-~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd----~~g~~kl 711 (772)
T KOG1152|consen 639 ED--DDYYYLETEVHGEGIDLFDFIEFKP-RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVD----SNGFVKL 711 (772)
T ss_pred ec--CCeeEEEecCCCCCcchhhhhhccC-ccchHHHHHHHHHHHhccccccccCceecccccccEEEe----cCCeEEE
Confidence 98 67999999976 3458889986554 489999999999999999999999999999999999999 8899999
Q ss_pred EecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCC
Q 001103 1027 GDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYAN 1088 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g 1088 (1157)
+|||.|.+..... ...++||..|+|||++.|..| .+..-|||+||++||.++...-||.+
T Consensus 712 idfgsaa~~ksgp-fd~f~gtv~~aapevl~g~~y-~gk~qdiwalgillytivykenpyyn 771 (772)
T KOG1152|consen 712 IDFGSAAYTKSGP-FDVFVGTVDYAAPEVLGGEKY-LGKPQDIWALGILLYTIVYKENPYYN 771 (772)
T ss_pred eeccchhhhcCCC-cceeeeeccccchhhhCCCcc-CCCcchhhhhhheeeEEEeccCCCcC
Confidence 9999887654443 445889999999999998765 47889999999999999999999864
No 401
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.94 E-value=2.9e-27 Score=259.25 Aligned_cols=252 Identities=24% Similarity=0.325 Sum_probs=198.5
Q ss_pred CCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|.-++.+|.|+- .|..+.+ .+++||+|.+..+ +..... .++..+|+.++..++|+||++++.+|.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p-f~n~~~-----akra~rel~l~~~v~~~nii~l~n~ftP~~ 88 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP-FQNQTH-----AKRAYRELKLMKCVNHKNIISLLNVFTPQK 88 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCc-cccCcc-----chhhhhhhhhhhhhcccceeeeeeccCccc
Confidence 457888899999998 5655655 5888999988766 333222 356678999999999999999999986532
Q ss_pred ----CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 952 ----GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 952 ----~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
-...|+|||+|.. +|..++. -.++-..+.+++.|++.|++|||+.||+||||||+||++. ....+||.
T Consensus 89 ~l~~~~e~y~v~e~m~~-nl~~vi~---~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~----~~~~lKi~ 160 (369)
T KOG0665|consen 89 TLEEFQEVYLVMELMDA-NLCQVIL---MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVN----SDCTLKIL 160 (369)
T ss_pred cHHHHHhHHHHHHhhhh-HHHHHHH---HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceec----chhheeec
Confidence 1257899999966 7877765 2367788999999999999999999999999999999998 77899999
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcC-----
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNT----- 1102 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~----- 1102 (1157)
|||+|.........+..+.|..|.|||++.|.. |...+||||+||++.||++|+..|.+.+.-+.+..+....
T Consensus 161 dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~--~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~ 238 (369)
T KOG0665|consen 161 DFGLARTEDTDFMMTPYVVTRYYRAPEVILGMG--YKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDP 238 (369)
T ss_pred cchhhcccCcccccCchhheeeccCchheeccC--CcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCH
Confidence 999999877776667788999999999998763 7889999999999999999999998765433332222100
Q ss_pred ------------------------CCCCCC-----------CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1103 ------------------------LRPQIP-----------ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1103 ------------------------lrpeip-----------~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+...+| ..-...+++++.+||..||++|.|++++|+|+..
T Consensus 239 ~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~HPY~ 313 (369)
T KOG0665|consen 239 SFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRHPYI 313 (369)
T ss_pred HHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcCCee
Confidence 000011 0113457899999999999999999999998654
No 402
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.93 E-value=2.5e-24 Score=214.66 Aligned_cols=251 Identities=28% Similarity=0.469 Sum_probs=199.7
Q ss_pred eeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCC-ceeEEeeeeecCCCCcE
Q 001103 877 LEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHP-NVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HP-NIVkLygvf~de~~~~L 955 (1157)
|.+.+.||.|+||.||++.+. ..+++|++........ .....+.+|+.++..+.|+ +|+++++.+.. ....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~-----~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--~~~~ 73 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLESKS-----KEVERFLREIQILASLNHPPNIVKLYDFFQD--EGSL 73 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhccch-----hHHHHHHHHHHHHHHccCCcceeeEEEEEec--CCEE
Confidence 678899999999999999988 7789999887532211 2357788999999999988 79999999955 4458
Q ss_pred EEEEEeecCCcchhhhcccc--ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCC-eEEEEecCCc
Q 001103 956 ATVTEYMVNGSLRHVLARKD--RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRP-ICKVGDFGLS 1032 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~g--r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g-~VKLiDFGLA 1032 (1157)
+++++++.++++.+++.... ..+.......++.|++.++.|+|+.+++||||||+|||++ ... .++++|||.+
T Consensus 74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~----~~~~~~~l~dfg~~ 149 (384)
T COG0515 74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLD----RDGRVVKLIDFGLA 149 (384)
T ss_pred EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec----CCCCeEEEeccCcc
Confidence 99999999999997776544 2688999999999999999999999999999999999998 555 7999999998
Q ss_pred ccccCCc-------ccCCCCCCCcccCcccccCCC-CCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----hHHHHHhhh
Q 001103 1033 RIKCNTL-------VSGGVRGTLPWMAPELLNGSN-NRVSEKVDVYSFGIAMWEIITGEEPYANMHC----GAIIGGILS 1100 (1157)
Q Consensus 1033 kl~~~~~-------~sts~~GTp~YmAPEVL~G~~-~~yS~KSDIWSLGVILYELLTGk~PF~g~~~----eeil~~Il~ 1100 (1157)
....... ......||..|++||.+.+.. ..++...|+|++|+++++++.|..||..... ......+..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 229 (384)
T COG0515 150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE 229 (384)
T ss_pred eecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHh
Confidence 7543322 235678999999999998632 3568899999999999999999999887763 333333333
Q ss_pred cCCC---CCCCCCC----cHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1101 NTLR---PQIPERC----DPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1101 ~~lr---peip~~i----SpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
.... ....... ...+.+++..|+..+|..|.+..+....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 230 LPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred cCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 3322 1122211 2578999999999999999998887765
No 403
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.93 E-value=3.3e-25 Score=247.37 Aligned_cols=261 Identities=26% Similarity=0.446 Sum_probs=211.7
Q ss_pred CCCeeEEEEecccCcEEEEEEEECC-------ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeee
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWRG-------TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGV 946 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~kG-------t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygv 946 (1157)
..+++..-.+-+|.||.||+|.|.. +.|-+|.++... .+--...+..|..++..+.|||+..+.++
T Consensus 283 r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A-------S~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 283 RCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA-------SQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred hhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc-------cHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 3456777788999999999998742 235566554331 12235678889999999999999999998
Q ss_pred eecCCCCcEEEEEEeecCCcchhhhcc-------ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCC
Q 001103 947 VPNGPGGTMATVTEYMVNGSLRHVLAR-------KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDP 1019 (1157)
Q Consensus 947 f~de~~~~LyLVMEYmeGGSL~dlLkr-------~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~ 1019 (1157)
..++ ....+.++.++.-|+|+.+|.. ..+.+...+...++.|++.|++|||.+||||.||-..|.+|+
T Consensus 356 ~ie~-~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvId---- 430 (563)
T KOG1024|consen 356 SIED-YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVID---- 430 (563)
T ss_pred Eeec-cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceeh----
Confidence 7664 4566788999999999999872 234567778888999999999999999999999999999999
Q ss_pred CCCeEEEEecCCcccccCC---cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHH
Q 001103 1020 QRPICKVGDFGLSRIKCNT---LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAII 1095 (1157)
Q Consensus 1020 e~g~VKLiDFGLAkl~~~~---~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil 1095 (1157)
+...|||+|=.+++-.-+. ...........||+||.+.. ..|+..+|+|||||+||||+| |+.|+...++.++.
T Consensus 431 d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n--~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~ 508 (563)
T KOG1024|consen 431 DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQN--SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME 508 (563)
T ss_pred hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhh--hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH
Confidence 7789999999998853322 12223345668999999984 478999999999999999999 99999999888776
Q ss_pred HHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHhh
Q 001103 1096 GGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQT 1149 (1157)
Q Consensus 1096 ~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLes 1149 (1157)
..+. .+++..-|-.+|.++..+|..||..+|++||++.|+..-|......+..
T Consensus 509 ~ylk-dGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~qlt~ 561 (563)
T KOG1024|consen 509 HYLK-DGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQLTR 561 (563)
T ss_pred HHHh-ccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHhh
Confidence 5554 5666777889999999999999999999999999999999988876643
No 404
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=2e-26 Score=280.95 Aligned_cols=205 Identities=20% Similarity=0.210 Sum_probs=149.5
Q ss_pred hCCC-CceeEEeeeeecC-----CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccC
Q 001103 934 NLHH-PNVVAFYGVVPNG-----PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDL 1007 (1157)
Q Consensus 934 ~L~H-PNIVkLygvf~de-----~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDL 1007 (1157)
.+.| .||+++++.+... ....++++||++ +++|.++|....+.+++..++.++.||+.||.|||++||+||||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDl 106 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNV 106 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccC
Confidence 4445 5777777776221 134677889987 55999999766667999999999999999999999999999999
Q ss_pred CccceeeccCC---------------CCCCeEEEEecCCcccccCC-----------------cccCCCCCCCcccCccc
Q 001103 1008 KCDNLLVNLRD---------------PQRPICKVGDFGLSRIKCNT-----------------LVSGGVRGTLPWMAPEL 1055 (1157)
Q Consensus 1008 KPENILLd~dd---------------~e~g~VKLiDFGLAkl~~~~-----------------~~sts~~GTp~YmAPEV 1055 (1157)
||+||||+..+ ...+.+||+|||+++..... ......+||+.|+|||+
T Consensus 107 KP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 186 (793)
T PLN00181 107 RPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEE 186 (793)
T ss_pred CchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhh
Confidence 99999996211 13456788888877632110 00112468999999999
Q ss_pred ccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHH
Q 001103 1056 LNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTE 1135 (1157)
Q Consensus 1056 L~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeE 1135 (1157)
+.+. .|+.++|||||||+||||++|.+||.... ..+..+....+++... ...+....++.+||.++|.+||++.+
T Consensus 187 ~~~~--~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~~~P~~Rps~~e 261 (793)
T PLN00181 187 DNGS--SSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRVLPPQIL-LNWPKEASFCLWLLHPEPSCRPSMSE 261 (793)
T ss_pred hccC--CCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhhcChhhh-hcCHHHHHHHHHhCCCChhhCcChHH
Confidence 9865 57899999999999999999998876432 1222222222222211 12456778999999999999999999
Q ss_pred HHHHHHHHH
Q 001103 1136 ITNRLRVMS 1144 (1157)
Q Consensus 1136 LLe~Lr~Lk 1144 (1157)
++++.+...
T Consensus 262 il~h~~~~~ 270 (793)
T PLN00181 262 LLQSEFINE 270 (793)
T ss_pred Hhhchhhhh
Confidence 999887643
No 405
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.93 E-value=2.7e-24 Score=236.69 Aligned_cols=260 Identities=19% Similarity=0.246 Sum_probs=201.4
Q ss_pred CeeEEEEecccCcEEEEEEEECCc---eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC----CceeEEeeeee
Q 001103 876 DLEELQELGSGTFGTVYRGKWRGT---DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH----PNVVAFYGVVP 948 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~kGt---~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H----PNIVkLygvf~ 948 (1157)
.|.+.+.||+|+||.||++..... .+|+|+......... ..+..|..++..+.. +++..+++...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--------~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~ 90 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--------SVLKIEIQVLKKLEKKNGPSHFPKLLDHGR 90 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--------ccchhHHHHHHHHhhhcCCCCCCEEEEecc
Confidence 899999999999999999998543 589998776422111 145668888888862 58888888874
Q ss_pred cCCCCcEEEEEEeecCCcchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCC-CCCCeEEE
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRD-PQRPICKV 1026 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd-~e~g~VKL 1026 (1157)
....+-++||+.+ |.+|.++.+... +.++...++.++.|++.+|++||+.|++||||||+|+++.... .....+.|
T Consensus 91 -~~~~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~l 168 (322)
T KOG1164|consen 91 -STEDFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYL 168 (322)
T ss_pred -CCCceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEE
Confidence 2256789999987 779999886554 7799999999999999999999999999999999999998543 23367999
Q ss_pred EecCCcc--ccc-CC------c-c-cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHH
Q 001103 1027 GDFGLSR--IKC-NT------L-V-SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAII 1095 (1157)
Q Consensus 1027 iDFGLAk--l~~-~~------~-~-sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil 1095 (1157)
.|||+++ ... .. . . ...+.||..|+++.+..+. ..+.+.|+|||++++.+|+.|.+||.........
T Consensus 169 lDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~--e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~ 246 (322)
T KOG1164|consen 169 LDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGI--EQGRRDDLESLFYMLLELLKGSLPWEALEMTDLK 246 (322)
T ss_pred EecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCC--ccCCchhhhhHHHHHHHHhcCCCCCccccccchH
Confidence 9999998 311 11 1 1 2345699999999999865 5689999999999999999999999876643333
Q ss_pred HHhhh---cCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1096 GGILS---NTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1096 ~~Il~---~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
..... ...........+.++.++...+-..+...+|.+..+...++......
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 247 SKFEKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred HHHHHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 22222 11111133456678999999999999999999999999988777653
No 406
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=2.4e-25 Score=219.43 Aligned_cols=164 Identities=24% Similarity=0.330 Sum_probs=130.3
Q ss_pred CcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCcccCCC
Q 001103 965 GSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLVSGGV 1044 (1157)
Q Consensus 965 GSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~sts~ 1044 (1157)
|+|.+++...++.+++..++.++.|++.||.|||+++ ||+|||++ .++.+|+ ||++....... .
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~----~~~~~~~--fG~~~~~~~~~----~ 64 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT----WDGLLKL--DGSVAFKTPEQ----S 64 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc----Cccceee--ccceEeecccc----C
Confidence 6889999876677999999999999999999999999 99999998 6778888 99987654322 2
Q ss_pred CCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh-HHHHHhhhcCCCC-----CCCCCCcH--HHH
Q 001103 1045 RGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG-AIIGGILSNTLRP-----QIPERCDP--EWR 1116 (1157)
Q Consensus 1045 ~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e-eil~~Il~~~lrp-----eip~~iSp--eLr 1116 (1157)
.||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+..+....... ..+..++. +++
T Consensus 65 ~g~~~y~aPE~~~~~--~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (176)
T smart00750 65 RVDPYFMAPEVIQGQ--SYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFA 142 (176)
T ss_pred CCcccccChHHhcCC--CCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHH
Confidence 589999999999864 5788999999999999999999999765432 2222322221111 11222333 699
Q ss_pred HHHHHHhccCCCCCCCHHHHHHHHHHHHHH
Q 001103 1117 KLMEECWSFNPAARPSFTEITNRLRVMSTA 1146 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPSaeELLe~Lr~Lk~a 1146 (1157)
++|.+||..+|.+||++.+++++++.....
T Consensus 143 ~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 143 DFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred HHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 999999999999999999999999888654
No 407
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.91 E-value=5.4e-25 Score=237.58 Aligned_cols=251 Identities=23% Similarity=0.318 Sum_probs=189.8
Q ss_pred CCeeEEEEecccCcEEEEEEEECCc--eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeeecCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWRGT--DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~kGt--~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~de~ 951 (1157)
+.|.+.+.||+|.||.+.+++++++ .+++|.+.+. ......|.+|...--.| .|.||+.-|+.....
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p---------~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt- 93 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP---------QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQT- 93 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc---------hhhHHHHHHHhccceeeccchhhhHHHHHHhhc-
Confidence 4688899999999999999999754 5899988765 22357788998876666 589999988764332
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
.+.+.++|||++.|+|..-+...+ +-+....+++.|++.||.|+|++++||||||.+||||-.. +...|||||||+
T Consensus 94 ~d~YvF~qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~--df~rvKlcDFG~ 169 (378)
T KOG1345|consen 94 SDAYVFVQEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA--DFYRVKLCDFGL 169 (378)
T ss_pred CceEEEeeccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC--CccEEEeeeccc
Confidence 558889999999999988776543 7788889999999999999999999999999999999733 455999999999
Q ss_pred cccccCCcccCCCCCCCcccCcccccC---CCCCCCchhHHHHHHHHHHHHHcCCCCCCCCCh----hHHHHHhhhcCCC
Q 001103 1032 SRIKCNTLVSGGVRGTLPWMAPELLNG---SNNRVSEKVDVYSFGIAMWEIITGEEPYANMHC----GAIIGGILSNTLR 1104 (1157)
Q Consensus 1032 Akl~~~~~~sts~~GTp~YmAPEVL~G---~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~----eeil~~Il~~~lr 1104 (1157)
.+..+..... ..-+..|.+||+... ......+..|+|.||+++|.+|+|++||+.... ...+.+.. +...
T Consensus 170 t~k~g~tV~~--~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~-~rk~ 246 (378)
T KOG1345|consen 170 TRKVGTTVKY--LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWL-KRKN 246 (378)
T ss_pred ccccCceehh--hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHh-cccC
Confidence 8754433222 335667999997642 234456779999999999999999999984322 12222222 2222
Q ss_pred CCCC---CCCcHHHHHHHHHHhccCCCCC---CCHHHHHHHHHH
Q 001103 1105 PQIP---ERCDPEWRKLMEECWSFNPAAR---PSFTEITNRLRV 1142 (1157)
Q Consensus 1105 peip---~~iSpeLrdLIkrCLqkDPskR---PSaeELLe~Lr~ 1142 (1157)
+..| ..+++.+..+.++-|..++.+| .+++.....+|.
T Consensus 247 ~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~ 290 (378)
T KOG1345|consen 247 PALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWK 290 (378)
T ss_pred ccCchhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHH
Confidence 2333 3478889999999999999999 455555554443
No 408
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.91 E-value=1.3e-24 Score=244.68 Aligned_cols=248 Identities=21% Similarity=0.321 Sum_probs=190.7
Q ss_pred CCeeEEEEecccCcEEEEEEEEC-----CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeee
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR-----GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVP 948 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k-----Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~ 948 (1157)
..|..+.+||.|+|++||++.+. ...||+|.+..... ...+..|+++|..+ -+.||+++.+++.
T Consensus 36 ~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----------p~ri~~El~~L~~~gG~~ni~~~~~~~r 105 (418)
T KOG1167|consen 36 NAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----------PSRILNELEMLYRLGGSDNIIKLNGCFR 105 (418)
T ss_pred hhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----------chHHHHHHHHHHHhccchhhhcchhhhc
Confidence 57888999999999999998763 45699998876532 24588999999999 5999999999988
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
. ++...+||||++.....+++.. ++...+..+++.++.||+++|.+|||||||||.|+|++ ...+.-.|+|
T Consensus 106 n--nd~v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n---~~t~rg~LvD 176 (418)
T KOG1167|consen 106 N--NDQVAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN---RRTQRGVLVD 176 (418)
T ss_pred c--CCeeEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccc---cccCCceEEe
Confidence 7 6689999999999888888754 56778999999999999999999999999999999998 3556778999
Q ss_pred cCCcccccC---------------Cc------------------------------ccCCCCCCCcccCcccccCCCCCC
Q 001103 1029 FGLSRIKCN---------------TL------------------------------VSGGVRGTLPWMAPELLNGSNNRV 1063 (1157)
Q Consensus 1029 FGLAkl~~~---------------~~------------------------------~sts~~GTp~YmAPEVL~G~~~~y 1063 (1157)
||+|..... .. ..-...||++|.|||++.... .-
T Consensus 177 FgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~-~Q 255 (418)
T KOG1167|consen 177 FGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP-RQ 255 (418)
T ss_pred chhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc-Cc
Confidence 999871000 00 000135999999999998653 34
Q ss_pred CchhHHHHHHHHHHHHHcCCCCCCCCChh-HHHHHhhh--------------cC---------------------C----
Q 001103 1064 SEKVDVYSFGIAMWEIITGEEPYANMHCG-AIIGGILS--------------NT---------------------L---- 1103 (1157)
Q Consensus 1064 S~KSDIWSLGVILYELLTGk~PF~g~~~e-eil~~Il~--------------~~---------------------l---- 1103 (1157)
+.++||||.|||++.+++++.||-....+ ..+..+.. +. +
T Consensus 256 ttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~ 335 (418)
T KOG1167|consen 256 TTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIES 335 (418)
T ss_pred CCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhh
Confidence 78899999999999999999998543221 11111100 00 0
Q ss_pred ----------CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHH
Q 001103 1104 ----------RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRV 1142 (1157)
Q Consensus 1104 ----------rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~ 1142 (1157)
+.......+..+.+|+.+||..||.+|.|+++.|+|..+
T Consensus 336 ~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF 384 (418)
T KOG1167|consen 336 IYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFF 384 (418)
T ss_pred cccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCC
Confidence 000111234578899999999999999999999997544
No 409
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.90 E-value=8.5e-23 Score=225.21 Aligned_cols=262 Identities=17% Similarity=0.248 Sum_probs=213.8
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVP 948 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~ 948 (1157)
+..-.|.+.++||+|+||..|+|+. ++.+||||.-..+. + ..++..|.+.++.|. .+.|...|-+-.
T Consensus 25 ~VG~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS------~----APQLrdEYr~YKlL~g~~GIP~vYYFGq 94 (449)
T KOG1165|consen 25 MVGPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS------E----APQLRDEYRTYKLLGGTEGIPQVYYFGQ 94 (449)
T ss_pred EecccceeccccccCcceeeecccccccCceEEEEeccccC------C----cchHHHHHHHHHHHcCCCCCCceeeecc
Confidence 4566899999999999999999986 78999999765442 1 246677888888884 789999987765
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCC-CCCCeEEEE
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRD-PQRPICKVG 1027 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd-~e~g~VKLi 1027 (1157)
+ +.+-.||||++ |.+|++++.-.++.|+.+.+..++.||+.-++|+|++.+|+|||||+|+||...+ .....+.|+
T Consensus 95 e--G~~NiLVidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~Ihii 171 (449)
T KOG1165|consen 95 E--GKYNILVIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHII 171 (449)
T ss_pred c--cchhhhhhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEE
Confidence 5 55667899987 7799999988999999999999999999999999999999999999999998654 345679999
Q ss_pred ecCCcccccCCcc--------cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChh---HHHH
Q 001103 1028 DFGLSRIKCNTLV--------SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCG---AIIG 1096 (1157)
Q Consensus 1028 DFGLAkl~~~~~~--------sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~e---eil~ 1096 (1157)
|||+|+...++.+ ..+..||..||+-....|. .-+.+.|+-|||-+++++|-|.+||.+.... +.++
T Consensus 172 DFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGr--EQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYe 249 (449)
T KOG1165|consen 172 DFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGR--EQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYE 249 (449)
T ss_pred eccchhhhcCccccccCccccccccccceeeeEeeccccc--hhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHH
Confidence 9999997554433 2356799999999988875 3489999999999999999999999986643 3334
Q ss_pred HhhhcCC---CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHh
Q 001103 1097 GILSNTL---RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMSTALQ 1148 (1157)
Q Consensus 1097 ~Il~~~l---rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aLe 1148 (1157)
.|-+... ...+...+|.++...+...-..+-.+-|+++-+...+..+...+.
T Consensus 250 KIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g 304 (449)
T KOG1165|consen 250 KIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLG 304 (449)
T ss_pred HhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcC
Confidence 4422211 123567789999999999999999999999999988887776543
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=6.2e-23 Score=219.12 Aligned_cols=259 Identities=19% Similarity=0.293 Sum_probs=208.8
Q ss_pred cccCCCeeEEEEecccCcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC-CceeEEeeee
Q 001103 871 IIKDSDLEELQELGSGTFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH-PNVVAFYGVV 947 (1157)
Q Consensus 871 ~I~~sdYeILrkLGsGsFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H-PNIVkLygvf 947 (1157)
.+....|.++++||+|+||.+|+|.. .|..||||+-..... ..++..|.++.+.|++ ..|+.++.+.
T Consensus 11 ~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----------hpqL~yEskvY~iL~~g~GiP~i~~y~ 80 (341)
T KOG1163|consen 11 LIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----------HPQLLYESKVYRILQGGVGIPHIRHYG 80 (341)
T ss_pred heeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----------CcchhHHHHHHHHhccCCCCchhhhhc
Confidence 35567899999999999999999987 688999998876532 2456778999999974 5677777666
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
.+ ..+-.+|||.+ |.+|++++.-..+.++...++.++-|++.-++|+|.+++|||||||+|+|..... ....+.|+
T Consensus 81 ~e--~~ynvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgr-h~~kl~LI 156 (341)
T KOG1163|consen 81 TE--KDYNVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGR-HCNKLYLI 156 (341)
T ss_pred cc--cccceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeecccc-ccceEEEE
Confidence 66 55778899987 7799999987888899999999999999999999999999999999999998544 45679999
Q ss_pred ecCCcccccCC--------cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhH---HHH
Q 001103 1028 DFGLSRIKCNT--------LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGA---IIG 1096 (1157)
Q Consensus 1028 DFGLAkl~~~~--------~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~ee---il~ 1096 (1157)
|||+|+...+. .......||..|++-....|. .-+.+.|+-|+|++|.++.-|.+||++..... ..+
T Consensus 157 DFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~--eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyE 234 (341)
T KOG1163|consen 157 DFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGI--EQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYE 234 (341)
T ss_pred eccchhhhccccccccCccccCCccceeeeehhhhhhhhh--hhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHH
Confidence 99999853321 122346799999998877654 34788999999999999999999999876432 233
Q ss_pred HhhhcCC---CCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1097 GILSNTL---RPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1097 ~Il~~~l---rpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
.|.+... ...+....|.++.-.+..|-..--++-|++..|.+..+.+.-
T Consensus 235 kI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 235 KISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred HHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 3433322 234667889999999999999999999999999888777654
No 411
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.86 E-value=1.7e-22 Score=241.30 Aligned_cols=255 Identities=25% Similarity=0.306 Sum_probs=189.1
Q ss_pred EEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEE
Q 001103 879 ELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~Ly 956 (1157)
....+|.|++|.|+..... ...++.|..... .. .....+.....+..|+-+-..|.|||++.....+.+.. ...
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~-~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~--~~~ 397 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VK-PTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID--GIL 397 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcc-cC-CcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc--cch
Confidence 4577999999988876552 333444433321 11 11222333344788888899999999988877766532 233
Q ss_pred EEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc
Q 001103 957 TVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~ 1036 (1157)
-.||||++ +|..++.+. ..+....+-.++.||+.||+|+|+.||.||||||+|+++. ..+.+||+|||.+....
T Consensus 398 ~~mE~~~~-Dlf~~~~~~-~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~----~~g~lki~Dfg~~~vf~ 471 (601)
T KOG0590|consen 398 QSMEYCPY-DLFSLVMSN-GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT----ENGILKIIDFGAASVFR 471 (601)
T ss_pred hhhhcccH-HHHHHHhcc-cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe----cCCceEEeecCcceeec
Confidence 34999999 999999765 3477888889999999999999999999999999999999 77899999999987532
Q ss_pred C---C--cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHH-HHhh-hc-----CCC
Q 001103 1037 N---T--LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAII-GGIL-SN-----TLR 1104 (1157)
Q Consensus 1037 ~---~--~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil-~~Il-~~-----~lr 1104 (1157)
. . ....+++|+..|+|||++.+..+. ...+||||.|++++.|.+|+.||......+.. .... .. .-.
T Consensus 472 ~~~e~~~~~~~g~~gS~pY~apE~~~~~~yd-pr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~ 550 (601)
T KOG0590|consen 472 YPWEKNIHESSGIVGSDPYLAPEVLTGKEYD-PRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGP 550 (601)
T ss_pred cCcchhhhhhcCcccCCcCcCcccccccccC-cchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccCh
Confidence 2 2 345678999999999999876433 35699999999999999999999865544321 1110 00 011
Q ss_pred CCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1105 PQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1105 peip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
..+...++.+.+.+|.+||+.||.+|.|+++|++.-|.-.
T Consensus 551 ~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 551 NRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRS 590 (601)
T ss_pred HHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhh
Confidence 1233457788899999999999999999999999877643
No 412
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=3.3e-21 Score=218.43 Aligned_cols=164 Identities=21% Similarity=0.162 Sum_probs=124.4
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC---CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeE-Eeeeeec
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR---GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVA-FYGVVPN 949 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k---Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVk-Lygvf~d 949 (1157)
..+|.+.+.||+|+||+||+|+++ ++.+|||++......... ......+.+|+++|++|+|+|++. +++.
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~---~~~~~~~~~E~~iL~~L~h~~iv~~l~~~--- 90 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSK---PLARHLAAREIRALKTVRGIGVVPQLLAT--- 90 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEeccccccccc---HHHHHHHHHHHHHHHhccCCCCCcEEEEc---
Confidence 357999999999999999999873 556899987532110011 123466899999999999999985 5442
Q ss_pred CCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccC-CccceeeccCCCCCCeEEEEe
Q 001103 950 GPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDL-KCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDL-KPENILLd~dd~e~g~VKLiD 1028 (1157)
+..|+||||++|++|... ... . ...++.|++.+|.|||++||+|||| ||+|||++ .++.+||+|
T Consensus 91 ---~~~~LVmE~~~G~~L~~~-~~~----~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~----~~~~ikLiD 155 (365)
T PRK09188 91 ---GKDGLVRGWTEGVPLHLA-RPH----G---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG----PDGEAAVID 155 (365)
T ss_pred ---CCcEEEEEccCCCCHHHh-Ccc----c---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc----CCCCEEEEE
Confidence 247999999999999632 111 1 1457889999999999999999999 99999997 567899999
Q ss_pred cCCcccccCCc---------ccCCCCCCCcccCcccccC
Q 001103 1029 FGLSRIKCNTL---------VSGGVRGTLPWMAPELLNG 1058 (1157)
Q Consensus 1029 FGLAkl~~~~~---------~sts~~GTp~YmAPEVL~G 1058 (1157)
||+|+...... ......+++.|+|||.+..
T Consensus 156 FGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 156 FQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred CccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence 99998543221 1134578889999999864
No 413
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.85 E-value=2.3e-22 Score=235.32 Aligned_cols=224 Identities=26% Similarity=0.432 Sum_probs=187.1
Q ss_pred ecccCcEEEEEEEE-----CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCCCcEE
Q 001103 883 LGSGTFGTVYRGKW-----RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 883 LGsGsFGtVYlAr~-----kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~~~~Ly 956 (1157)
+|+|+||.|++++- .|.-||+|++++.....+.. .....|..++..++ ||.+|+++-.++. .+.++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~------~~t~~er~il~~~~~~~f~v~lhyafqt--~~kl~ 73 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDR------THTKQERIILAFVHNTPFLVKLHYAFQT--DGKLY 73 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccc------cccccHHHHHhhccCCCceeeeeeeecc--ccchh
Confidence 79999999997543 46669999998875544332 14456788899887 9999999999887 66789
Q ss_pred EEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc
Q 001103 957 TVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~ 1036 (1157)
+++++..||+|...+++... +.+.....+..+++.+++++|+.+|+|||+|++||+++ .+|++++.|||+++...
T Consensus 74 l~ld~~rgg~lft~l~~~~~-f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld----~~Ghi~~tdfglske~v 148 (612)
T KOG0603|consen 74 LILDFLRGGDLFTRLSKEVM-FDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL----LEGHIKLTDFGLSKEAV 148 (612)
T ss_pred HhhhhcccchhhhccccCCc-hHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec----ccCccccCCchhhhHhH
Confidence 99999999999888876554 66777777889999999999999999999999999999 88899999999998766
Q ss_pred CCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHH
Q 001103 1037 NTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWR 1116 (1157)
Q Consensus 1037 ~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLr 1116 (1157)
+.... |||..|||||+++| ....+|+||||+++|||++|..||.. ++...|... .+..|..++..++
T Consensus 149 ~~~~~---cgt~eymApEI~~g----h~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~--~~~~p~~l~~~a~ 215 (612)
T KOG0603|consen 149 KEKIA---CGTYEYRAPEIING----HLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKA--ELEMPRELSAEAR 215 (612)
T ss_pred hhhhc---ccchhhhhhHhhhc----cCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhh--ccCCchhhhHHHH
Confidence 55443 89999999999983 36779999999999999999999997 555555543 3357888899999
Q ss_pred HHHHHHhccCCCCCCC
Q 001103 1117 KLMEECWSFNPAARPS 1132 (1157)
Q Consensus 1117 dLIkrCLqkDPskRPS 1132 (1157)
+++.+++..+|..|--
T Consensus 216 ~~~~~l~~r~p~nrLg 231 (612)
T KOG0603|consen 216 SLFRQLFKRNPENRLG 231 (612)
T ss_pred HHHHHHHhhCHHHHhc
Confidence 9999999999999943
No 414
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.82 E-value=4.8e-21 Score=232.80 Aligned_cols=250 Identities=19% Similarity=0.214 Sum_probs=181.2
Q ss_pred CeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcE
Q 001103 876 DLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~L 955 (1157)
++...+.||++.|=+|.+|+++...|+||++-+..- ....+.. .+.++|++ ...+++||.+.+..+... ....
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p---~~sL~~~-~qrL~~ik-~~l~~~pn~lPfqk~~~t--~kAA 96 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDP---TISLRPF-KQRLEEIK-FALMKAPNCLPFQKVLVT--DKAA 96 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCC---CCCchHH-HHHHHHHH-HHhhcCCcccchHHHHHh--hHHH
Confidence 678889999999999999999766699999877531 1111222 23334555 666789999999887655 4567
Q ss_pred EEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc-
Q 001103 956 ATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI- 1034 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl- 1034 (1157)
|||-+|+.. +|++.+. .+.++.......|+.||+.||+.+|..||+|+|||.|||||+ ...++.|+||.--+.
T Consensus 97 ylvRqyvkh-nLyDRlS-TRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiT----SWNW~~LtDFAsFKPt 170 (1431)
T KOG1240|consen 97 YLVRQYVKH-NLYDRLS-TRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILIT----SWNWLYLTDFASFKPT 170 (1431)
T ss_pred HHHHHHHhh-hhhhhhc-cchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEe----eechhhhhcccccCCc
Confidence 888888855 9999985 455678888889999999999999999999999999999999 888999999986552
Q ss_pred ---ccCCcc----cCCCCCCCcccCcccccC--------CCCC-CCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHH
Q 001103 1035 ---KCNTLV----SGGVRGTLPWMAPELLNG--------SNNR-VSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGG 1097 (1157)
Q Consensus 1035 ---~~~~~~----sts~~GTp~YmAPEVL~G--------~~~~-yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~ 1097 (1157)
..++.. ..+-..-.+|.|||.+-. ++.. .+++.||||+||+++||++ |++||.-.+..+....
T Consensus 171 YLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~ 250 (1431)
T KOG1240|consen 171 YLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSG 250 (1431)
T ss_pred cCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhcc
Confidence 122222 122234457999998753 1222 6788999999999999988 7999863222111110
Q ss_pred hhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1098 ILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1098 Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
- .......+..--+..+++||..|++.||.+|-|++++|+.
T Consensus 251 ~-~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 251 N-ADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred C-ccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence 0 0000000111124478999999999999999999999986
No 415
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=8.1e-20 Score=205.07 Aligned_cols=263 Identities=24% Similarity=0.284 Sum_probs=186.2
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECC--c-----------------------------------eEEEEEEecccccCC
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRG--T-----------------------------------DIAIKRIKKSCFLGR 914 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kG--t-----------------------------------~VAVKVIkk~~l~~r 914 (1157)
+..++|+|...||+|.-..||.++... . +.|||.+......
T Consensus 154 FtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~-- 231 (598)
T KOG4158|consen 154 FTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHD-- 231 (598)
T ss_pred cchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccC--
Confidence 455789999999999999999775521 0 1355655433211
Q ss_pred ChhHHHHHHHHHHHHH------H--------HHh--------CCCCceeEEeeeeecC----------------------
Q 001103 915 SSEQEWLIKEFWREAH------I--------ISN--------LHHPNVVAFYGVVPNG---------------------- 950 (1157)
Q Consensus 915 ~~e~e~likqflrEIk------I--------LK~--------L~HPNIVkLygvf~de---------------------- 950 (1157)
.....+.+...+|+- + .+. -+|||||+++++|.++
T Consensus 232 -s~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~ 310 (598)
T KOG4158|consen 232 -SGDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPS 310 (598)
T ss_pred -CchHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceeccc
Confidence 222333444444431 1 111 2499999998887652
Q ss_pred ---CCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 951 ---PGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 951 ---~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
+...+|+||..+.. +|..++-... .+.....-++.|+++|+.|||++||.|||+|.+|||+..++..-..+.|+
T Consensus 311 g~g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVva 387 (598)
T KOG4158|consen 311 GAGEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVA 387 (598)
T ss_pred ccCCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEc
Confidence 23478999998865 8888885433 45667777899999999999999999999999999999887677899999
Q ss_pred ecCCcccccCC-----cc--cCCCCCCCcccCcccccCCCCCC----CchhHHHHHHHHHHHHHcCCCCCCCCChhHHHH
Q 001103 1028 DFGLSRIKCNT-----LV--SGGVRGTLPWMAPELLNGSNNRV----SEKVDVYSFGIAMWEIITGEEPYANMHCGAIIG 1096 (1157)
Q Consensus 1028 DFGLAkl~~~~-----~~--sts~~GTp~YmAPEVL~G~~~~y----S~KSDIWSLGVILYELLTGk~PF~g~~~eeil~ 1096 (1157)
|||.+-..... .. .-..-|....||||+....+.+. -.|+|.|+.|.+.||++...-||.+.....+-.
T Consensus 388 DFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~ 467 (598)
T KOG4158|consen 388 DFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDT 467 (598)
T ss_pred ccceeeeccccccccccccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheech
Confidence 99987532221 01 11134788899999986433221 147999999999999999999998743322222
Q ss_pred HhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1097 GILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1097 ~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
+-......+.++..+++.+++|+..+|+.||++|+++.-..+.|
T Consensus 468 r~Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 468 RTYQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred hhhhhhhCCCCcccCChHHHHHHHHHhcCCccccCCccHHHhHH
Confidence 22334445678899999999999999999999999876555543
No 416
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.79 E-value=7.9e-20 Score=197.71 Aligned_cols=251 Identities=28% Similarity=0.496 Sum_probs=202.6
Q ss_pred CCeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCc
Q 001103 875 SDLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGT 954 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~ 954 (1157)
.++.++.+|.+...|..|+|+|+|..+++|+++......+ ....|..|.-.|+-+.||||+.+++.+..++ .
T Consensus 190 ~~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~~t~r------isrdfneefp~lrifshpnilpvlgacnspp--n 261 (448)
T KOG0195|consen 190 SSLNLITKLAESHSGELWRGRWQGNDIVAKILNVREVTAR------ISRDFNEEFPALRIFSHPNILPVLGACNSPP--N 261 (448)
T ss_pred hhhhhhhhhccCCCcccccccccCcchhhhhhhhhhcchh------hcchhhhhCcceeeecCCchhhhhhhccCCC--C
Confidence 4556677899999999999999999999998876543322 2356778888888889999999999998854 6
Q ss_pred EEEEEEeecCCcchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCC--ceeccCCccceeeccCCCCCCeEEE--Eec
Q 001103 955 MATVTEYMVNGSLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKN--IVHFDLKCDNLLVNLRDPQRPICKV--GDF 1029 (1157)
Q Consensus 955 LyLVMEYmeGGSL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkG--IIHRDLKPENILLd~dd~e~g~VKL--iDF 1029 (1157)
+.++..||+.|+|+.+|... .-..+..++.+++.++++|+.|||+.. |.---|....++++ ++.+.+| +|-
T Consensus 262 lv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid----edltarismad~ 337 (448)
T KOG0195|consen 262 LVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID----EDLTARISMADT 337 (448)
T ss_pred ceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec----chhhhheecccc
Confidence 88899999999999999764 334677899999999999999999985 33346888899998 4444433 343
Q ss_pred CCcccccCCcccCCCCCCCcccCcccccCCCCCC-CchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC
Q 001103 1030 GLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRV-SEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP 1108 (1157)
Q Consensus 1030 GLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~y-S~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip 1108 (1157)
-++.. ..+..-.|.||+||.++..+... -..+|+|||.++||||.|...||......+.-..+.-..++..+|
T Consensus 338 kfsfq------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialeglrv~ip 411 (448)
T KOG0195|consen 338 KFSFQ------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIP 411 (448)
T ss_pred eeeee------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccccccCC
Confidence 33211 12234578899999998654332 356999999999999999999999988888878888888999999
Q ss_pred CCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHH
Q 001103 1109 ERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVM 1143 (1157)
Q Consensus 1109 ~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~L 1143 (1157)
.+++..+.+||.-|+..||.+||.++.|.-.|+.+
T Consensus 412 pgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 412 PGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 99999999999999999999999999998888765
No 417
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.79 E-value=4.2e-19 Score=183.46 Aligned_cols=146 Identities=19% Similarity=0.140 Sum_probs=107.8
Q ss_pred EEEecccCcEEEEEEEE-CCceEEEEEEecccccCCCh------------------hHHHHHHHHHHHHHHHHhCCCCce
Q 001103 880 LQELGSGTFGTVYRGKW-RGTDIAIKRIKKSCFLGRSS------------------EQEWLIKEFWREAHIISNLHHPNV 940 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~-kGt~VAVKVIkk~~l~~r~~------------------e~e~likqflrEIkILK~L~HPNI 940 (1157)
.+.||+|+||.||+|.. +|+.||||+++......... ..........+|++++++|.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 35799999999999987 58899999998653211110 000112234569999999987776
Q ss_pred eEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHH-HHCCceeccCCccceeeccCCC
Q 001103 941 VAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYL-HMKNIVHFDLKCDNLLVNLRDP 1019 (1157)
Q Consensus 941 VkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYL-HSkGIIHRDLKPENILLd~dd~ 1019 (1157)
...+..... ..+|||||++|+++...+.. ...++...++.++.|++.+|.|| |+.||+||||||+|||++
T Consensus 82 ~~p~~~~~~----~~~iVmE~i~g~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~---- 152 (190)
T cd05147 82 PCPEPILLK----SHVLVMEFIGDDGWAAPRLK-DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH---- 152 (190)
T ss_pred CCCcEEEec----CCEEEEEEeCCCCCcchhhh-cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----
Confidence 433222222 23899999999877654332 34588999999999999999999 799999999999999997
Q ss_pred CCCeEEEEecCCcccc
Q 001103 1020 QRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 1020 e~g~VKLiDFGLAkl~ 1035 (1157)
. +.++|+|||+|...
T Consensus 153 ~-~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 D-GKLYIIDVSQSVEH 167 (190)
T ss_pred C-CcEEEEEccccccC
Confidence 2 57999999998643
No 418
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.79 E-value=8.6e-20 Score=222.05 Aligned_cols=203 Identities=31% Similarity=0.500 Sum_probs=153.6
Q ss_pred CCCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC
Q 001103 874 DSDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP 951 (1157)
Q Consensus 874 ~sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~ 951 (1157)
..+|+.++.|-.|+||.||+.+++ .+.+|+| +.+..+. .|- ++.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~li-------------lRn--ilt~a~npfvv---------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNLI-------------LRN--ILTFAGNPFVV---------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccchh-------------hhc--cccccCCccee----------
Confidence 468999999999999999999886 5668884 4432111 110 22222333333
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGL 1031 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGL 1031 (1157)
|+-...++.-+ .++.. ++.+++|||+.||+|||+||+|+||+ .-+++|++|||+
T Consensus 136 -------------gDc~tllk~~g-~lPvd--------mvla~Eylh~ygivhrdlkpdnllIT----~mGhiKlTDfgL 189 (1205)
T KOG0606|consen 136 -------------GDCATLLKNIG-PLPVD--------MVLAVEYLHSYGIVHRDLKPDNLLIT----SMGHIKLTDFGL 189 (1205)
T ss_pred -------------chhhhhcccCC-CCcch--------hhHHhHhhccCCeecCCCCCCcceee----ecccccccchhh
Confidence 45555565433 24322 27789999999999999999999999 889999999999
Q ss_pred cccccCC----------------cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHH
Q 001103 1032 SRIKCNT----------------LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAII 1095 (1157)
Q Consensus 1032 Akl~~~~----------------~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil 1095 (1157)
++..... ......|||+.|.|||++.. +.|+..+|||++|+|+||++-|..||.+...++++
T Consensus 190 sk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr--qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelf 267 (1205)
T KOG0606|consen 190 SKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR--QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELF 267 (1205)
T ss_pred hhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh--hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHH
Confidence 8742111 11234589999999999874 46899999999999999999999999999999988
Q ss_pred HHhhhcCCC-CCCCCCCcHHHHHHHHHHhccCCCCC
Q 001103 1096 GGILSNTLR-PQIPERCDPEWRKLMEECWSFNPAAR 1130 (1157)
Q Consensus 1096 ~~Il~~~lr-peip~~iSpeLrdLIkrCLqkDPskR 1130 (1157)
..++..... ++-...++++++++|.++|..+|..|
T Consensus 268 g~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~R 303 (1205)
T KOG0606|consen 268 GQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCR 303 (1205)
T ss_pred hhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhh
Confidence 887665332 23355578999999999999999999
No 419
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.79 E-value=3.7e-19 Score=191.01 Aligned_cols=176 Identities=11% Similarity=0.055 Sum_probs=133.0
Q ss_pred cCCCeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHH------HHHHHHHHHHhCCCCceeEEeee
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIK------EFWREAHIISNLHHPNVVAFYGV 946 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~lik------qflrEIkILK~L~HPNIVkLygv 946 (1157)
-..+|++++.||.|+||.||+...++..+|||++...... .+.... .+.+|++.+.+|.||+|....++
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~-----~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~ 103 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKR-----TERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDF 103 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCc-----hHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEe
Confidence 3579999999999999999998777788999998765211 122222 26799999999999999999888
Q ss_pred eecCC------CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCC
Q 001103 947 VPNGP------GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQ 1020 (1157)
Q Consensus 947 f~de~------~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e 1020 (1157)
+.... .+..+|+|||++|.+|.++.. +++ ....+++.+|..||+.|++||||||.|||++ .
T Consensus 104 ~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~----~ 170 (232)
T PRK10359 104 YLLAERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS----K 170 (232)
T ss_pred eeecccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe----C
Confidence 65432 235789999999999987742 222 2356899999999999999999999999998 4
Q ss_pred CCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHH
Q 001103 1021 RPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEII 1080 (1157)
Q Consensus 1021 ~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELL 1080 (1157)
.+ ++|+|||............ .++.. ..|..++|+|+||+++..+.
T Consensus 171 ~g-i~liDfg~~~~~~e~~a~d-----------~~vle--r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 NG-LRIIDLSGKRCTAQRKAKD-----------RIDLE--RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred CC-EEEEECCCcccccchhhHH-----------HHHHH--hHhcccccccceeEeehHHH
Confidence 55 9999999876443222211 12222 23567899999999987665
No 420
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.78 E-value=2.1e-18 Score=183.52 Aligned_cols=190 Identities=16% Similarity=0.066 Sum_probs=141.4
Q ss_pred eEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCCCcEE
Q 001103 878 EELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 878 eILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~~~~Ly 956 (1157)
.+...|++|+||+||++...+..++.+.+.....+.+ ......+.+|+++|++|. |+++++++++ . ..+
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~----~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~----~~~ 74 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLR----GVAWWLARREALALRQLDGLPRTPRLLHW--D----GRH 74 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccchhhhh----hHHHHHHHHHHHHHHhcCCCCCCCEEEEE--c----CEE
Confidence 3567899999999998887778888776665432211 111235789999999995 5889999886 2 368
Q ss_pred EEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccC-CccceeeccCCCCCCeEEEEecCCcccc
Q 001103 957 TVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDL-KCDNLLVNLRDPQRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDL-KPENILLd~dd~e~g~VKLiDFGLAkl~ 1035 (1157)
++|||+.|.+|...+.. ....++.|++.+|+++|++||+|||| ||+|||++ .++.++|+|||+|...
T Consensus 75 lvmeyI~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~----~~g~i~LIDFG~A~~~ 142 (218)
T PRK12274 75 LDRSYLAGAAMYQRPPR--------GDLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ----EDGSPAVIDFQLAVRG 142 (218)
T ss_pred EEEeeecCccHHhhhhh--------hhHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc----CCCCEEEEECCCceec
Confidence 99999999998654321 11346789999999999999999999 79999998 5678999999999853
Q ss_pred cCCcc--------------cCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCC
Q 001103 1036 CNTLV--------------SGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANM 1089 (1157)
Q Consensus 1036 ~~~~~--------------sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~ 1089 (1157)
..... ......++.|++|+........--...++++.|+-+|.++|+..|+-+.
T Consensus 143 ~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~ 210 (218)
T PRK12274 143 NPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWED 210 (218)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcccc
Confidence 33221 0112368889999865543222236789999999999999999886543
No 421
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.77 E-value=2.3e-18 Score=189.94 Aligned_cols=237 Identities=19% Similarity=0.195 Sum_probs=148.5
Q ss_pred CeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC----------CceeEE
Q 001103 876 DLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH----------PNVVAF 943 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H----------PNIVkL 943 (1157)
.+...+.||.|+++.||.+++. +..+|||+...... ......+++.+|.-....+.+ -.++.-
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~-----~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P 87 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPAD-----ASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVP 87 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESST-----THTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccc-----cchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEee
Confidence 4567789999999999999994 68899999876541 111224555555544433322 111111
Q ss_pred eeeee---------cCCC-C-----cEEEEEEeecCCcchhhhcc---cc---ccccHHHHHHHHHHHHHHHHHHHHCCc
Q 001103 944 YGVVP---------NGPG-G-----TMATVTEYMVNGSLRHVLAR---KD---RILDRRKKLMLMMDAAFGMEYLHMKNI 1002 (1157)
Q Consensus 944 ygvf~---------de~~-~-----~LyLVMEYmeGGSL~dlLkr---~g---r~L~e~qVlkIa~QLa~ALeYLHSkGI 1002 (1157)
++... ...+ . ..+++|+-+ .++|..++.- .. ..+.....+.+..|+++.+++||.+||
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl 166 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL 166 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce
Confidence 11111 1101 1 235677776 4488776542 11 224445556677899999999999999
Q ss_pred eeccCCccceeeccCCCCCCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCC------CCCCCchhHHHHHHHHH
Q 001103 1003 VHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGS------NNRVSEKVDVYSFGIAM 1076 (1157)
Q Consensus 1003 IHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~------~~~yS~KSDIWSLGVIL 1076 (1157)
+|+||||+|+|++ .+|.++|+||+........... ...+..|.+||..... .-.++.+.|.|+||++|
T Consensus 167 VHgdi~~~nfll~----~~G~v~Lg~F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~l 240 (288)
T PF14531_consen 167 VHGDIKPENFLLD----QDGGVFLGDFSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITL 240 (288)
T ss_dssp EEST-SGGGEEE-----TTS-EEE--GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHH
T ss_pred EecccceeeEEEc----CCCCEEEcChHHHeecCceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHH
Confidence 9999999999999 7899999999977654443332 2356789999976431 23478899999999999
Q ss_pred HHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCC
Q 001103 1077 WEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAAR 1130 (1157)
Q Consensus 1077 YELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskR 1130 (1157)
|.|.+|..||........... ....+..+++.++.||..||+++|.+|
T Consensus 241 y~lWC~~lPf~~~~~~~~~~~------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 241 YSLWCGRLPFGLSSPEADPEW------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHSS-STCCCGGGSTSGG------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHHHccCCCCCCCccccccc------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 999999999987654322211 122333789999999999999999987
No 422
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.77 E-value=3.2e-18 Score=175.41 Aligned_cols=146 Identities=18% Similarity=0.108 Sum_probs=109.4
Q ss_pred EEEecccCcEEEEEEEEC-CceEEEEEEecccccCC------------------ChhHHHHHHHHHHHHHHHHhCCCCce
Q 001103 880 LQELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGR------------------SSEQEWLIKEFWREAHIISNLHHPNV 940 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r------------------~~e~e~likqflrEIkILK~L~HPNI 940 (1157)
.+.||+|+||.||+|++. |+.||||+++....... ..........+.+|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 468999999999999884 88999999987521100 00111112345689999999999987
Q ss_pred eEEeeeeecCCCCcEEEEEEeecCCcchhh-hccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCC
Q 001103 941 VAFYGVVPNGPGGTMATVTEYMVNGSLRHV-LARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRD 1018 (1157)
Q Consensus 941 VkLygvf~de~~~~LyLVMEYmeGGSL~dl-Lkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd 1018 (1157)
.....+... ..+|||||++|+++... +.. ..++...+..++.|++.+|.+||+ +||+||||||+|||++
T Consensus 82 ~~p~~~~~~----~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~--- 152 (190)
T cd05145 82 PVPEPILLK----KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH--- 152 (190)
T ss_pred CCceEEEec----CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE---
Confidence 543333322 13799999998865433 332 347788899999999999999999 9999999999999996
Q ss_pred CCCCeEEEEecCCccccc
Q 001103 1019 PQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 1019 ~e~g~VKLiDFGLAkl~~ 1036 (1157)
++.++|+|||++....
T Consensus 153 --~~~~~liDFG~a~~~~ 168 (190)
T cd05145 153 --DGKPYIIDVSQAVELD 168 (190)
T ss_pred --CCCEEEEEcccceecC
Confidence 3579999999987543
No 423
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=2.3e-18 Score=212.32 Aligned_cols=248 Identities=19% Similarity=0.232 Sum_probs=183.6
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEE-CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC---CCceeEEeeee
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKW-RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH---HPNVVAFYGVV 947 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~-kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~---HPNIVkLygvf 947 (1157)
+....|.|-+.||+|+||+||+|.. +|+.||+|+-+....+.-.. -.+++.+|+ -+.|..++..+
T Consensus 695 ~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEfYI-----------~~q~~~RLk~~~~~~~~~~~~a~ 763 (974)
T KOG1166|consen 695 VGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEFYI-----------CLQVMERLKPQMLPSIMHISSAH 763 (974)
T ss_pred ecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceeeee-----------hHHHHHhhchhhhcchHHHHHHH
Confidence 4457899999999999999999987 67889999988775553321 122334443 23444444444
Q ss_pred ecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecc---CCCCCCeE
Q 001103 948 PNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNL---RDPQRPIC 1024 (1157)
Q Consensus 948 ~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~---dd~e~g~V 1024 (1157)
.. .+..++|+||.+.|+|.+++. ..+.+++..+..++.||+..|++||..+|||+||||+|+||.. ++....-+
T Consensus 764 ~~--~~~S~lv~ey~~~Gtlld~~N-~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l 840 (974)
T KOG1166|consen 764 VF--QNASVLVSEYSPYGTLLDLIN-TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGL 840 (974)
T ss_pred cc--CCcceeeeeccccccHHHhhc-cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccce
Confidence 33 345789999999999999997 5567999999999999999999999999999999999999963 22345679
Q ss_pred EEEecCCccc---ccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhc
Q 001103 1025 KVGDFGLSRI---KCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSN 1101 (1157)
Q Consensus 1025 KLiDFGLAkl---~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~ 1101 (1157)
+|+|||.+.- ..+.....+.++|..+-.+|++.|. .|+..+|.|.|..+++.||.|+.- + . .+
T Consensus 841 ~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~gr--pWtYq~DyfGlAa~~h~mLFG~y~----------q-~-~~ 906 (974)
T KOG1166|consen 841 YLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGR--PWTYQIDYFGLAATVHVMLFGKYM----------E-V-KN 906 (974)
T ss_pred EEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCC--CCchhhhhHHHHHHHHHHHHHHHH----------H-h-cC
Confidence 9999998863 3444566778899999999999865 799999999999999999998652 1 1 11
Q ss_pred CCCCC----CCCCCcH-HHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHH
Q 001103 1102 TLRPQ----IPERCDP-EWRKLMEECWSFNPAARPSFTEITNRLRVMSTAL 1147 (1157)
Q Consensus 1102 ~lrpe----ip~~iSp-eLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~aL 1147 (1157)
..... ++..+.. -+.+|+..+|..|-..=|...+|...+......-
T Consensus 907 g~~~~~~~~~~Ry~~~~~W~~~F~~lLN~~~~~~p~l~~lr~~~~~~~~~~ 957 (974)
T KOG1166|consen 907 GSSWMVKTNFPRYWKRDMWNKFFDLLLNPDCDTLPNLQELRTELEEVLAEH 957 (974)
T ss_pred CcceeccccchhhhhHHHHHHHHHHHhCcCcccchhHHHHHHHHHHHHHHH
Confidence 11111 2222222 3578999999844444478888777776665543
No 424
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=8.4e-18 Score=177.69 Aligned_cols=141 Identities=21% Similarity=0.216 Sum_probs=106.1
Q ss_pred EEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-----CCCceeEEeeeeecCCC-
Q 001103 879 ELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-----HHPNVVAFYGVVPNGPG- 952 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-----~HPNIVkLygvf~de~~- 952 (1157)
-.+.||+|+||.||.....+. .+||++..... . ..+.+.+|+++++.| +||||+++|+++.++.+
T Consensus 6 ~~~~LG~G~~~~Vy~hp~~~~-k~IKv~~~~~~----~----~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~ 76 (210)
T PRK10345 6 EQSPLGTGRHRKCYAHPEDAQ-RCIKIVYHRGD----G----GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGT 76 (210)
T ss_pred CcceecCCCceEEEECCCCcC-eEEEEEecccc----c----hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCC
Confidence 357799999999996222333 46887765311 0 135688999999999 67999999999988542
Q ss_pred Cc-EEEEEEe--ecCCcchhhhccccccccHHHHHHHHHHHHHHH-HHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 953 GT-MATVTEY--MVNGSLRHVLARKDRILDRRKKLMLMMDAAFGM-EYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 953 ~~-LyLVMEY--meGGSL~dlLkr~gr~L~e~qVlkIa~QLa~AL-eYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
+. +.+|||| +.+++|.+++++. .+++. ..++.|++.++ +|||+++|+||||||+|||++..+.....++|+|
T Consensus 77 g~v~~~I~e~~G~~~~tL~~~l~~~--~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiD 152 (210)
T PRK10345 77 GYVYDVIADFDGKPSITLTEFAEQC--RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCD 152 (210)
T ss_pred eEEEEEEecCCCCcchhHHHHHHcc--cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEE
Confidence 34 3478999 5579999999763 25555 35578888777 9999999999999999999985444556899999
Q ss_pred cCCc
Q 001103 1029 FGLS 1032 (1157)
Q Consensus 1029 FGLA 1032 (1157)
|+-+
T Consensus 153 g~G~ 156 (210)
T PRK10345 153 NIGE 156 (210)
T ss_pred CCCC
Confidence 5433
No 425
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=3.8e-17 Score=166.84 Aligned_cols=142 Identities=20% Similarity=0.252 Sum_probs=111.7
Q ss_pred EEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEE
Q 001103 881 QELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTE 960 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVME 960 (1157)
+.||+|++|.||+|++.|..++||+...................+.+|+.++..+.|++|+....++.+ ....+++||
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~~~~~lv~e 79 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--PENFIIVME 79 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe--CCCCEEEEE
Confidence 579999999999999999999999876442222111222233567889999999999887655555444 345789999
Q ss_pred eecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 961 YMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 961 YmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
|++|++|.+++.... . ....++.+++.+|.+||+.+++|+|++|.|||++ .+.++|+|||++..
T Consensus 80 ~~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-----~~~~~liDf~~a~~ 143 (211)
T PRK14879 80 YIEGEPLKDLINSNG----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-----GGKIYLIDFGLAEF 143 (211)
T ss_pred EeCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-----CCCEEEEECCcccC
Confidence 999999999886432 2 7788899999999999999999999999999997 35789999998754
No 426
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=1e-16 Score=162.59 Aligned_cols=136 Identities=23% Similarity=0.325 Sum_probs=105.1
Q ss_pred EecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCcee--EEeeeeecCCCCcEEEEE
Q 001103 882 ELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVV--AFYGVVPNGPGGTMATVT 959 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIV--kLygvf~de~~~~LyLVM 959 (1157)
.||+|+||.||++.+.+..+++|+..................++.+|+++++.+.|+++. .++.. . ....+++|
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~--~--~~~~~lv~ 76 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDV--D--PDNKTIVM 76 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE--E--CCCCEEEE
Confidence 389999999999999999999998665422211111222246778999999999887543 44443 3 23468999
Q ss_pred EeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 960 EYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 960 EYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
||++|++|.+++..... .++.+++.+|.+||+.|++|+|++|.|||++ .+.++|+|||++..
T Consensus 77 e~~~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-----~~~~~liDfg~a~~ 138 (199)
T TIGR03724 77 EYIEGKPLKDVIEEGND--------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-----DDKLYLIDFGLGKY 138 (199)
T ss_pred EEECCccHHHHHhhcHH--------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-----CCcEEEEECCCCcC
Confidence 99999999888754221 6789999999999999999999999999996 35799999999864
No 427
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=2.3e-16 Score=185.71 Aligned_cols=142 Identities=22% Similarity=0.231 Sum_probs=111.4
Q ss_pred eeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEE
Q 001103 877 LEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~Ly 956 (1157)
|...+.||+|+||+||++.+.+..+++|+...................+.+|+++++.++|++++..+.+... ....+
T Consensus 335 ~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--~~~~~ 412 (535)
T PRK09605 335 KIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD--PEEKT 412 (535)
T ss_pred cCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe--CCCCE
Confidence 3557889999999999999988887777654332221111122234678899999999999998877666555 33568
Q ss_pred EEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 957 TVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
+||||++|++|.+++. ....++.+++.+|.|||++||+||||||+|||++ .+.++|+|||+++.
T Consensus 413 lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-----~~~~~liDFGla~~ 476 (535)
T PRK09605 413 IVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-----DDRLYLIDFGLGKY 476 (535)
T ss_pred EEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-----CCcEEEEeCccccc
Confidence 9999999999988874 3466889999999999999999999999999994 35799999999864
No 428
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=3.6e-16 Score=167.31 Aligned_cols=148 Identities=17% Similarity=0.077 Sum_probs=111.4
Q ss_pred CeeEEEEecccCcEEEEEEE-E--CCceEEEEEEecccccCC---------------C-hhHHHHHHHHHHHHHHHHhCC
Q 001103 876 DLEELQELGSGTFGTVYRGK-W--RGTDIAIKRIKKSCFLGR---------------S-SEQEWLIKEFWREAHIISNLH 936 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr-~--kGt~VAVKVIkk~~l~~r---------------~-~e~e~likqflrEIkILK~L~ 936 (1157)
.|++.+.||+|+||.||+|. . +|+.||||+++....... . ...+.....+.+|+.+++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 57888999999999999998 3 688999999886432110 0 011112345678999999997
Q ss_pred C--CceeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCC-ceeccCCcccee
Q 001103 937 H--PNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKN-IVHFDLKCDNLL 1013 (1157)
Q Consensus 937 H--PNIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkG-IIHRDLKPENIL 1013 (1157)
+ ..+++++.. . ..++||||+.|.+|...+... ..+....+..++.|++.+|.+||++| |+||||||+|||
T Consensus 109 ~~~i~~p~~~~~--~----~~~lV~E~~~g~~L~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIl 181 (237)
T smart00090 109 EAGVPVPKPIAW--R----RNVLVMEFIGGDGLPAPRLKD-VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNIL 181 (237)
T ss_pred hcCCCCCeeeEe--c----CceEEEEEecCCccccccccc-CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEE
Confidence 5 334555543 1 247999999998887655332 23566677889999999999999999 999999999999
Q ss_pred eccCCCCCCeEEEEecCCcccc
Q 001103 1014 VNLRDPQRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 1014 Ld~dd~e~g~VKLiDFGLAkl~ 1035 (1157)
++ .+.++|+|||.+...
T Consensus 182 i~-----~~~i~LiDFg~a~~~ 198 (237)
T smart00090 182 VH-----DGKVVIIDVSQSVEL 198 (237)
T ss_pred EE-----CCCEEEEEChhhhcc
Confidence 96 347999999998643
No 429
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.66 E-value=3.1e-16 Score=183.08 Aligned_cols=208 Identities=35% Similarity=0.547 Sum_probs=165.7
Q ss_pred HHhCCCCceeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCc-eeccCCcc
Q 001103 932 ISNLHHPNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNI-VHFDLKCD 1010 (1157)
Q Consensus 932 LK~L~HPNIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGI-IHRDLKPE 1010 (1157)
|+.+.|.|+.+++|.+.+. ..+++|.+||..|+|.+.+......+++.....++++++.||.|||.-.| .|+.|+..
T Consensus 1 l~~l~h~n~~~f~g~~~~~--~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~ 78 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDG--PEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSS 78 (484)
T ss_pred CcccchhhhhhheeeEecC--CceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccc
Confidence 4678899999999999884 68899999999999999999877779999999999999999999998866 99999999
Q ss_pred ceeeccCCCCCCeEEEEecCCcccccCC---cccCCCCCCCcccCcccccCCC--CC---CCchhHHHHHHHHHHHHHcC
Q 001103 1011 NLLVNLRDPQRPICKVGDFGLSRIKCNT---LVSGGVRGTLPWMAPELLNGSN--NR---VSEKVDVYSFGIAMWEIITG 1082 (1157)
Q Consensus 1011 NILLd~dd~e~g~VKLiDFGLAkl~~~~---~~sts~~GTp~YmAPEVL~G~~--~~---yS~KSDIWSLGVILYELLTG 1082 (1157)
|.+++ ....+||+|||+....... .......-...|.|||.+.+.. .. .+.+.|+||+|++++|+++.
T Consensus 79 nClvd----~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r 154 (484)
T KOG1023|consen 79 NCLVD----SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFR 154 (484)
T ss_pred cceee----eeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhc
Confidence 99999 8889999999998765421 1111122345699999998631 11 46789999999999999999
Q ss_pred CCCCCCCC----hhHHHHHhhh---cCCCCCCCC--CCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1083 EEPYANMH----CGAIIGGILS---NTLRPQIPE--RCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1083 k~PF~g~~----~eeil~~Il~---~~lrpeip~--~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
+.||.... ..+++..+.. ..++|.+.. ...+++..+++.||..+|.+||+++++-..+..+..
T Consensus 155 ~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 155 SGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 99997632 2345555444 123444331 456679999999999999999999999888776654
No 430
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.64 E-value=1.7e-15 Score=155.27 Aligned_cols=142 Identities=18% Similarity=0.023 Sum_probs=106.6
Q ss_pred CeeEEEEecccCcEEEEEEEE-CCceEEEEEEecccccCC-Ch-------------hHHHHHHHHHHHHHHHHhCCCC--
Q 001103 876 DLEELQELGSGTFGTVYRGKW-RGTDIAIKRIKKSCFLGR-SS-------------EQEWLIKEFWREAHIISNLHHP-- 938 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~-kGt~VAVKVIkk~~l~~r-~~-------------e~e~likqflrEIkILK~L~HP-- 938 (1157)
.|.+.+.||+|+||.||++.+ .|+.||||++........ .. ..........+|..++..+.|+
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 367788999999999999988 588999999875421000 00 0011123467899999999877
Q ss_pred ceeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCC
Q 001103 939 NVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRD 1018 (1157)
Q Consensus 939 NIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd 1018 (1157)
.++..++. ...+++|||++|++|..+... .....++.+++.++.++|+.||+||||||+|||++
T Consensus 96 ~v~~~~~~------~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~--- 159 (198)
T cd05144 96 PVPKPIDW------NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD--- 159 (198)
T ss_pred CCCceeec------CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc---
Confidence 44444432 235899999999998765431 23456788999999999999999999999999998
Q ss_pred CCCCeEEEEecCCccc
Q 001103 1019 PQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 1019 ~e~g~VKLiDFGLAkl 1034 (1157)
.++.++|+|||++..
T Consensus 160 -~~~~~~liDfg~~~~ 174 (198)
T cd05144 160 -DDEKIYIIDWPQMVS 174 (198)
T ss_pred -CCCcEEEEECCcccc
Confidence 677999999999854
No 431
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.63 E-value=1.1e-16 Score=185.34 Aligned_cols=171 Identities=26% Similarity=0.369 Sum_probs=132.1
Q ss_pred CcEEEEEEeecCCcchhhhcc--ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecC
Q 001103 953 GTMATVTEYMVNGSLRHVLAR--KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFG 1030 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr--~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFG 1030 (1157)
.++||.|++|...+|.++|.+ .....++...+.++.|++.|++| +|.+|||+||.||++. .+..+||.|||
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~----~d~q~kIgDFg 401 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS----DDDQLKIGDFG 401 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc----cchhhhhhhhh
Confidence 368999999999999999964 34456777889999999999999 9999999999999998 55689999999
Q ss_pred CcccccCCc-------ccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhHHHHHhhhcC
Q 001103 1031 LSRIKCNTL-------VSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGAIIGGILSNT 1102 (1157)
Q Consensus 1031 LAkl~~~~~-------~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~eeil~~Il~~~ 1102 (1157)
+........ ..+..+||.+||+||.+.|. .|+.++||||||+|||||+. =..+|.. ...+..+.++.
T Consensus 402 l~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~--~y~~kvdIyaLGlil~EL~~~f~T~~er---~~t~~d~r~g~ 476 (516)
T KOG1033|consen 402 LVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQ--QYSEKVDIYALGLILAELLIQFSTQFER---IATLTDIRDGI 476 (516)
T ss_pred heeecccCCcccchhhhhhhcccccccCCHHHHhhh--hhhhhcchhhHHHHHHHHHHHhccHHHH---HHhhhhhhcCC
Confidence 987644433 34556899999999999965 68999999999999999997 2333322 22233333444
Q ss_pred CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHH
Q 001103 1103 LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEI 1136 (1157)
Q Consensus 1103 lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeEL 1136 (1157)
+++.+....+ +-..|+.+||.+.|.+||++.+.
T Consensus 477 ip~~~~~d~p-~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 477 IPPEFLQDYP-EEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred CChHHhhcCc-HHHHHHHHhcCCCcccCchHHHH
Confidence 4444444443 44689999999999999944433
No 432
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.59 E-value=1.4e-14 Score=135.32 Aligned_cols=132 Identities=20% Similarity=0.147 Sum_probs=109.3
Q ss_pred EEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC--CceeEEeeeeecCCCCcEE
Q 001103 879 ELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH--PNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H--PNIVkLygvf~de~~~~Ly 956 (1157)
+++.||+|.++.||++...+..+++|+...... ...+.+|..+++.+.| ..+++++.+... .+..+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~----------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~--~~~~~ 69 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSREK----------GADREREVAILQLLARKGLPVPKVLASGES--DGWSY 69 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCCc----------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCC--CCccE
Confidence 467899999999999999888899998765421 2467789999999976 588999888765 46789
Q ss_pred EEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHC---CceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 957 TVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMK---NIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 957 LVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSk---GIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
++|||+.++.+..+ +......++.+++.+|.+||.. +++|+||+|+|||++ ..+.++|+|||.+.
T Consensus 70 ~v~e~~~g~~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~----~~~~~~l~Df~~~~ 137 (155)
T cd05120 70 LLMEWIEGETLDEV--------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD----DGKILGIIDWEYAG 137 (155)
T ss_pred EEEEecCCeecccC--------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE----CCcEEEEEeccccc
Confidence 99999999888654 3445667789999999999985 699999999999998 56789999999885
Q ss_pred c
Q 001103 1034 I 1034 (1157)
Q Consensus 1034 l 1034 (1157)
.
T Consensus 138 ~ 138 (155)
T cd05120 138 Y 138 (155)
T ss_pred C
Confidence 3
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.56 E-value=2.7e-14 Score=153.11 Aligned_cols=144 Identities=15% Similarity=0.173 Sum_probs=106.3
Q ss_pred EEec-ccCcEEEEEEEECCceEEEEEEecccccCCChh-----HHHHHHHHHHHHHHHHhCCCCce--eEEeeeeecCCC
Q 001103 881 QELG-SGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSE-----QEWLIKEFWREAHIISNLHHPNV--VAFYGVVPNGPG 952 (1157)
Q Consensus 881 rkLG-sGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e-----~e~likqflrEIkILK~L~HPNI--VkLygvf~de~~ 952 (1157)
..|| .|+.|+||+++..+..++||.+.......+-.. .......+.+|++++.+|.|++| ++.+++......
T Consensus 37 ~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~~ 116 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRHG 116 (239)
T ss_pred ceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeecC
Confidence 4577 788999999988889999999875433211110 11234567899999999998775 667666433212
Q ss_pred C--cEEEEEEeecC-CcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEec
Q 001103 953 G--TMATVTEYMVN-GSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDF 1029 (1157)
Q Consensus 953 ~--~LyLVMEYmeG-GSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDF 1029 (1157)
. ..++|||+++| .+|.+++... .+++. .+.+++.+|.+||++||+||||||+|||++ .++.++|+||
T Consensus 117 ~~~~~~lV~e~l~G~~~L~~~l~~~--~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~----~~~~v~LIDf 186 (239)
T PRK01723 117 LFYRADILIERIEGARDLVALLQEA--PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLD----PDGKFWLIDF 186 (239)
T ss_pred cceeeeEEEEecCCCCCHHHHHhcC--CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEc----CCCCEEEEEC
Confidence 1 23599999997 6888887542 34443 356899999999999999999999999998 4568999999
Q ss_pred CCccc
Q 001103 1030 GLSRI 1034 (1157)
Q Consensus 1030 GLAkl 1034 (1157)
|.+..
T Consensus 187 g~~~~ 191 (239)
T PRK01723 187 DRGEL 191 (239)
T ss_pred CCccc
Confidence 98754
No 434
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.55 E-value=2.5e-14 Score=143.55 Aligned_cols=141 Identities=18% Similarity=0.050 Sum_probs=96.7
Q ss_pred EEEecccCcEEEEEEEEC-CceEEEEEEecccccCCChhHH----------------HHHHHHHHHHHHHHhCCCC--ce
Q 001103 880 LQELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLGRSSEQE----------------WLIKEFWREAHIISNLHHP--NV 940 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~r~~e~e----------------~likqflrEIkILK~L~HP--NI 940 (1157)
.+.||+|+||+||++.+. ++.||||+++............ ........|...+.++.+. .+
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999886 8889999987642211110000 0001123566666666443 34
Q ss_pred eEEeeeeecCCCCcEEEEEEeecCCcchh-hhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccCC
Q 001103 941 VAFYGVVPNGPGGTMATVTEYMVNGSLRH-VLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLRD 1018 (1157)
Q Consensus 941 VkLygvf~de~~~~LyLVMEYmeGGSL~d-lLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~dd 1018 (1157)
.+.+++. ..++||||++++.+.. .+.... . ...+..++.+++.++.++|. ++|+||||||+|||++
T Consensus 82 ~~~~~~~------~~~lv~e~~~g~~~~~~~l~~~~--~-~~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~--- 149 (187)
T cd05119 82 PKPIDLN------RHVLVMEFIGGDGIPAPRLKDVR--L-LEDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD--- 149 (187)
T ss_pred CceEecC------CCEEEEEEeCCCCccChhhhhhh--h-cccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE---
Confidence 5555431 2589999999965432 121111 1 15677889999999999999 9999999999999997
Q ss_pred CCCCeEEEEecCCccc
Q 001103 1019 PQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 1019 ~e~g~VKLiDFGLAkl 1034 (1157)
++.++|+|||.+..
T Consensus 150 --~~~~~liDfg~a~~ 163 (187)
T cd05119 150 --DGKVYIIDVPQAVE 163 (187)
T ss_pred --CCcEEEEECccccc
Confidence 45799999999864
No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.53 E-value=4.7e-16 Score=186.43 Aligned_cols=257 Identities=23% Similarity=0.245 Sum_probs=194.3
Q ss_pred CCeeEEEEecccCcEEEEEEEECC---ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWRG---TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNG 950 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~kG---t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de 950 (1157)
..|.+.+.||+|+|+.|-+....+ ..+|+|.+.... ........+..|..+=+.+. |+|++++++....
T Consensus 20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~------~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~- 92 (601)
T KOG0590|consen 20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP------KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSS- 92 (601)
T ss_pred ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC------CccchhhhcCccccccccccccccccccCCccCC-
Confidence 456777889999999998776632 236666655442 11122345556777777776 9999999999877
Q ss_pred CCCcEEEEEEeecCCcchhhh-ccccccccHHHHHHHHHHHHHHHHHHH-HCCceeccCCccceeeccCCCCCC-eEEEE
Q 001103 951 PGGTMATVTEYMVNGSLRHVL-ARKDRILDRRKKLMLMMDAAFGMEYLH-MKNIVHFDLKCDNLLVNLRDPQRP-ICKVG 1027 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dlL-kr~gr~L~e~qVlkIa~QLa~ALeYLH-SkGIIHRDLKPENILLd~dd~e~g-~VKLi 1027 (1157)
....+++++|..|+++...+ .......+......++.|+..++.|+| ..++.||||||+|.+++ ..+ .+++.
T Consensus 93 -~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~----~s~~~l~~~ 167 (601)
T KOG0590|consen 93 -PRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLD----ESGSALKIA 167 (601)
T ss_pred -CcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhc----cCCCcccCC
Confidence 56788999999999999888 433325667778889999999999999 99999999999999998 555 89999
Q ss_pred ecCCcccccC----CcccCCCCC-CCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHH-HHhhhc
Q 001103 1028 DFGLSRIKCN----TLVSGGVRG-TLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAII-GGILSN 1101 (1157)
Q Consensus 1028 DFGLAkl~~~----~~~sts~~G-Tp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil-~~Il~~ 1101 (1157)
|||+|..... .......+| ++.|+|||...+.. ......|+||.|+++.-|++|..||......... ......
T Consensus 168 df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~-~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~ 246 (601)
T KOG0590|consen 168 DFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKA-YRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSN 246 (601)
T ss_pred CchhhccccccCCcceeeecccCCCCCCCCcccccchh-hcCCCcccccccccccccccCCCCccccccccccceeeccc
Confidence 9999986443 223344678 99999999998642 3467799999999999999999999764433211 111222
Q ss_pred C--CCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHH
Q 001103 1102 T--LRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMS 1144 (1157)
Q Consensus 1102 ~--lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk 1144 (1157)
. +.......++....+++.+++..+|..|.+.+++-...|...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 247 KGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS 291 (601)
T ss_pred ccccccCccccCChhhhhcccccccCCchhccccccccccccccc
Confidence 1 123345667888999999999999999999999887766554
No 436
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.38 E-value=5.7e-13 Score=156.61 Aligned_cols=250 Identities=23% Similarity=0.214 Sum_probs=188.7
Q ss_pred cCCCeeEEEEecc--cCcEEEEEEEE----CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEee
Q 001103 873 KDSDLEELQELGS--GTFGTVYRGKW----RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYG 945 (1157)
Q Consensus 873 ~~sdYeILrkLGs--GsFGtVYlAr~----kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLyg 945 (1157)
....+.+.+.+|. |.+|.||.++. .+..+|+|.-+........ ...-.+|+...+.+ .|++.++.+.
T Consensus 112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~------~~~k~~~~~s~~~i~~~~~~v~~~~ 185 (524)
T KOG0601|consen 112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLD------SKRKLREFLSHHKIDSHENPVRDSP 185 (524)
T ss_pred hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccc------cccccchhhcccccCccccccccCc
Confidence 3456678889999 99999998766 4566898874433211111 12224566666666 4999999888
Q ss_pred eeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHH----HHHHHHHCCceeccCCccceeeccCCCCC
Q 001103 946 VVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAF----GMEYLHMKNIVHFDLKCDNLLVNLRDPQR 1021 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~----ALeYLHSkGIIHRDLKPENILLd~dd~e~ 1021 (1157)
.+.. .+.+++-+|+|. .+|..+.......++...++..+.+... ||.++|+..|+|-|+||+||++. .+
T Consensus 186 ~~e~--~~~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~----~~ 258 (524)
T KOG0601|consen 186 AWEG--SGILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTT----SD 258 (524)
T ss_pred cccc--CCcceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecc----cc
Confidence 8877 678999999985 6887777766677889999999999999 99999999999999999999998 55
Q ss_pred -CeEEEEecCCcccccCCcccCC------CCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHH
Q 001103 1022 -PICKVGDFGLSRIKCNTLVSGG------VRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAI 1094 (1157)
Q Consensus 1022 -g~VKLiDFGLAkl~~~~~~sts------~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eei 1094 (1157)
...+++|||+.....+...... ..|...|++||..++. ++...|+|+||.++.+...+..++..... ..
T Consensus 259 ~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l---~~~~~di~sl~ev~l~~~l~~~~~~~g~~-~~ 334 (524)
T KOG0601|consen 259 WTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL---ATFASDIFSLGEVILEAILGSHLPSVGKN-SS 334 (524)
T ss_pred cceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccc---cchHhhhcchhhhhHhhHhhcccccCCCC-CC
Confidence 7899999999886655443211 2588899999999864 68889999999999999998776654311 11
Q ss_pred HHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1095 IGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1095 l~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
..++.....+.++....+.++...+..|++.+|..|++...+.++
T Consensus 335 W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 335 WSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred ccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 112222234455666677788889999999999999998887764
No 437
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.23 E-value=4.1e-11 Score=139.33 Aligned_cols=145 Identities=21% Similarity=0.207 Sum_probs=96.3
Q ss_pred EEecccCcEEEEEEEE-CCceEEEEEEecccccCCC--------------------------hhHHHHHH------HHHH
Q 001103 881 QELGSGTFGTVYRGKW-RGTDIAIKRIKKSCFLGRS--------------------------SEQEWLIK------EFWR 927 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~-kGt~VAVKVIkk~~l~~r~--------------------------~e~e~lik------qflr 927 (1157)
+.||.|++|.||+|+. +|+.||||+.+......-. .-.+.... .+.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 5799999999999998 6899999998654210000 00000111 2445
Q ss_pred HHHHHHhCC-----CCc--eeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHH-HHHHHHH
Q 001103 928 EAHIISNLH-----HPN--VVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAF-GMEYLHM 999 (1157)
Q Consensus 928 EIkILK~L~-----HPN--IVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~-ALeYLHS 999 (1157)
|++.+.++. +++ ++++|..+. ...++||||++|++|.++........+ ...++.+++. .+..+|.
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~----~~~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRT----SERVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhc----CCceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHh
Confidence 666555552 232 334443222 245899999999999887643221122 2345555554 4788999
Q ss_pred CCceeccCCccceeeccCCCCCCeEEEEecCCccccc
Q 001103 1000 KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 1000 kGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~ 1036 (1157)
.|++|+|+||.||+++ .++.++|+|||++....
T Consensus 276 ~g~~H~D~hPgNilv~----~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 276 DGFFHADLHPGNIFVL----KDGKIIALDFGIVGRLS 308 (437)
T ss_pred CCceeCCCCcccEEEC----CCCcEEEEeCCCeeECC
Confidence 9999999999999998 66789999999987544
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.20 E-value=5.2e-11 Score=117.23 Aligned_cols=127 Identities=17% Similarity=0.114 Sum_probs=94.4
Q ss_pred EEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCc-eeEEeeeeecCCCCcEEEE
Q 001103 880 LQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPN-VVAFYGVVPNGPGGTMATV 958 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPN-IVkLygvf~de~~~~LyLV 958 (1157)
++.|+.|.++.||+++..+..|++|+...... ....+.+|+.+++.+.+.+ +++++..... ..++|
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~---------~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~----~~~lv 69 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGTE---------LLINRENEAENSKLAAEAGIGPKLYYFDPE----TGVLI 69 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCcc---------cccCHHHHHHHHHHHHHhCCCCceEEEeCC----CCeEE
Confidence 57789999999999999989999998754311 0123457888888885544 3456555332 24789
Q ss_pred EEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCc-----eeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 959 TEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNI-----VHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 959 MEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGI-----IHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
|||++|.++.... . ....++.+++.+|..||+.++ +|+|++|.|||++ .+.++|+|||.+.
T Consensus 70 ~e~i~G~~l~~~~------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-----~~~~~liDf~~a~ 135 (170)
T cd05151 70 TEFIEGSELLTED------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-----DGRLWLIDWEYAG 135 (170)
T ss_pred EEecCCCcccccc------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-----CCeEEEEeccccc
Confidence 9999998886531 1 112346789999999999985 9999999999997 2368999999874
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.16 E-value=5.5e-11 Score=141.55 Aligned_cols=153 Identities=20% Similarity=0.255 Sum_probs=93.5
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEeccccc--------------------C--C----ChhHHHHHHHH-
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFL--------------------G--R----SSEQEWLIKEF- 925 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~--------------------~--r----~~e~e~likqf- 925 (1157)
.+|+. +.||+|++|.||+|+++ |+.||||++++.... . + ..-.+...+.+
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 35665 78999999999999984 889999999865210 0 0 00011122233
Q ss_pred -----HHHHHHHHhCC----CCceeEEeeeeecCCCCcEEEEEEeecCCcchhh--hcccc---ccccHHHHHHHHHHHH
Q 001103 926 -----WREAHIISNLH----HPNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHV--LARKD---RILDRRKKLMLMMDAA 991 (1157)
Q Consensus 926 -----lrEIkILK~L~----HPNIVkLygvf~de~~~~LyLVMEYmeGGSL~dl--Lkr~g---r~L~e~qVlkIa~QLa 991 (1157)
.+|+..+.++. +...+.+-.++.+- ....+|||||+.|+.+.++ +...+ +.+.+..+..++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~-st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDY-CSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeeccc-CCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH-
Confidence 33444444432 33222222222111 2245799999999999764 22222 123333344444444
Q ss_pred HHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccccc
Q 001103 992 FGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 992 ~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~ 1036 (1157)
...|++|+|+||.|||++.+++..+.++++|||++....
T Consensus 277 ------f~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~ 315 (537)
T PRK04750 277 ------FRDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN 315 (537)
T ss_pred ------HhCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence 469999999999999998554455699999999987543
No 440
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.16 E-value=1.1e-11 Score=152.64 Aligned_cols=246 Identities=22% Similarity=0.268 Sum_probs=179.7
Q ss_pred CCeeEEEEecccCcEEEEEEEEC--CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCC
Q 001103 875 SDLEELQELGSGTFGTVYRGKWR--GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPG 952 (1157)
Q Consensus 875 sdYeILrkLGsGsFGtVYlAr~k--Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~ 952 (1157)
.++.+.+-+-+|+++.++.++-. |...++|+..+........ .+.+.++-.++-...+|.++....-+.. .
T Consensus 804 d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~-----~~s~r~~s~~~i~p~~P~v~~~~~s~~~--r 876 (1205)
T KOG0606|consen 804 DGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTND-----YESIRSKSNILITPRSPAVVRSFPSFPC--R 876 (1205)
T ss_pred ccceecccccCCCCcccccCCccccccccchhhhccchhhcccc-----ccccCCccCccccCCCCceecccCCCCC--C
Confidence 45666777888999999977654 3234555444322211110 1223334444444456777766544333 4
Q ss_pred CcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 953 GTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
...+++|+|..+++|...|+..+ ..+....+.++..+..+++|||...++|||++|.|+|+. ..++.+++|||..
T Consensus 877 sP~~L~~~~~~~~~~~Skl~~~~-~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~----~~gh~~l~~~~t~ 951 (1205)
T KOG0606|consen 877 SPLPLVGHYLNGGDLPSKLHNSG-CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA----YDGHRPLTDFGTL 951 (1205)
T ss_pred CCcchhhHHhccCCchhhhhcCC-CcccccccchhHHHHhhhhccccchhhcccccccchhhc----ccCCcccCccccc
Confidence 57899999999999999887655 456666677788899999999999999999999999998 7788999999833
Q ss_pred cccc-------C-------------------------CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHH
Q 001103 1033 RIKC-------N-------------------------TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEII 1080 (1157)
Q Consensus 1033 kl~~-------~-------------------------~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELL 1080 (1157)
.... . ........||+.|.+||.+.+. .....+|||++|++++|.+
T Consensus 952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~--~hgs~ad~~~~g~~l~e~l 1029 (1205)
T KOG0606|consen 952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGR--RHGSAADWWSSGVCLFEVL 1029 (1205)
T ss_pred cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccc--cCCCcchhhhhhhhhhhhh
Confidence 2100 0 0112235699999999999875 3466799999999999999
Q ss_pred cCCCCCCCCChhHHHHHhhhcCCCC-CCCCCCcHHHHHHHHHHhccCCCCCCCHH
Q 001103 1081 TGEEPYANMHCGAIIGGILSNTLRP-QIPERCDPEWRKLMEECWSFNPAARPSFT 1134 (1157)
Q Consensus 1081 TGk~PF~g~~~eeil~~Il~~~lrp-eip~~iSpeLrdLIkrCLqkDPskRPSae 1134 (1157)
+|.+||.......+++.+......+ ..+...+.+.++++...|..+|.+|..+.
T Consensus 1030 ~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1030 TGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred cCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 9999999999888888887665543 35667889999999999999999997654
No 441
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.11 E-value=7.1e-10 Score=117.31 Aligned_cols=142 Identities=17% Similarity=0.076 Sum_probs=99.1
Q ss_pred EEecccCcEEEEEEEEC--------CceEEEEEEecccc--cCCC----------------hhHHHHHHHHHHHHHHHHh
Q 001103 881 QELGSGTFGTVYRGKWR--------GTDIAIKRIKKSCF--LGRS----------------SEQEWLIKEFWREAHIISN 934 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k--------Gt~VAVKVIkk~~l--~~r~----------------~e~e~likqflrEIkILK~ 934 (1157)
..||.|--+.||.|... +..+|||+.+.... ..+. ...........+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 56899999999999764 36899998764321 1100 0011111233489999999
Q ss_pred CC--CCceeEEeeeeecCCCCcEEEEEEeecCCcch-hhhccccccccHHHHHHHHHHHHHHHHHH-HHCCceeccCCcc
Q 001103 935 LH--HPNVVAFYGVVPNGPGGTMATVTEYMVNGSLR-HVLARKDRILDRRKKLMLMMDAAFGMEYL-HMKNIVHFDLKCD 1010 (1157)
Q Consensus 935 L~--HPNIVkLygvf~de~~~~LyLVMEYmeGGSL~-dlLkr~gr~L~e~qVlkIa~QLa~ALeYL-HSkGIIHRDLKPE 1010 (1157)
|. .-++++.+++. .-+|||||+.+..+. ..++. ..++......+..+++.+|..| |+.||||+||++.
T Consensus 83 l~~~Gv~vP~pi~~~------~~~lvME~Ig~~~~~~~~Lkd--~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~ 154 (197)
T cd05146 83 MQKAGIPCPEVVVLK------KHVLVMSFIGDDQVPAPKLKD--AKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEY 154 (197)
T ss_pred HHHcCCCCCeEEEec------CCEEEEEEcCCCCccchhhhc--cccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 85 35677777652 248899999775442 22322 1244556677789999999998 8999999999999
Q ss_pred ceeeccCCCCCCeEEEEecCCcccc
Q 001103 1011 NLLVNLRDPQRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 1011 NILLd~dd~e~g~VKLiDFGLAkl~ 1035 (1157)
|||+. ++.+.|+|||.+...
T Consensus 155 NIL~~-----~~~v~iIDF~qav~~ 174 (197)
T cd05146 155 NMLWH-----DGKVWFIDVSQSVEP 174 (197)
T ss_pred HEEEE-----CCcEEEEECCCceeC
Confidence 99996 257999999988654
No 442
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.05 E-value=1.7e-09 Score=114.04 Aligned_cols=136 Identities=22% Similarity=0.274 Sum_probs=101.7
Q ss_pred EecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC--CCceeEEeeeeecCCCCcEEEEE
Q 001103 882 ELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH--HPNVVAFYGVVPNGPGGTMATVT 959 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~--HPNIVkLygvf~de~~~~LyLVM 959 (1157)
.+++|+-+.+|++.+.|.++.+|.-.++......-+..--..+..+|++++.++. --+.+.+|++... ...|+|
T Consensus 3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~----~~~I~m 78 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD----NGLIVM 78 (204)
T ss_pred hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC----CCEEEE
Confidence 5789999999999998888777765444333322222223456788999999885 4455667766443 457899
Q ss_pred EeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 960 EYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 960 EYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
||++|..|.+++... ...++..+-..+.-||..||+|+||.++||++. .+.+.++|||++..
T Consensus 79 e~I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~-----~~~i~~IDfGLg~~ 140 (204)
T COG3642 79 EYIEGELLKDALEEA--------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILS-----GGRIYFIDFGLGEF 140 (204)
T ss_pred EEeCChhHHHHHHhc--------chHHHHHHHHHHHHHHhcCeecCCCccceEEEe-----CCcEEEEECCcccc
Confidence 999999998888654 134566777778889999999999999999997 23489999999863
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.04 E-value=1.1e-10 Score=137.74 Aligned_cols=252 Identities=21% Similarity=0.214 Sum_probs=177.3
Q ss_pred cCCCeeEEEEecccCcEEEEEEEEC---CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeeeee
Q 001103 873 KDSDLEELQELGSGTFGTVYRGKWR---GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGVVP 948 (1157)
Q Consensus 873 ~~sdYeILrkLGsGsFGtVYlAr~k---Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygvf~ 948 (1157)
...+|..+..||.|.|+.|+....+ +..|++|.+.+..... ..+ ..-..|+-+...+ .|.+++.++..|.
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~-~~d-----i~sl~ev~l~~~l~~~~~~~g~~~~W~ 336 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF-ASD-----IFSLGEVILEAILGSHLPSVGKNSSWS 336 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch-Hhh-----hcchhhhhHhhHhhcccccCCCCCCcc
Confidence 4468899999999999999976543 4568988776652211 111 1223455555555 4888888887776
Q ss_pred cCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEe
Q 001103 949 NGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGD 1028 (1157)
Q Consensus 949 de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiD 1028 (1157)
. ....|+-.|||+++++...+ .....+++..++.+..|++.++.++|++.++|+|+||+||++..++ +..++.|
T Consensus 337 ~--~r~~~ip~e~~~~~s~~l~~-~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~---~~~~~~~ 410 (524)
T KOG0601|consen 337 Q--LRQGYIPLEFCEGGSSSLRS-VTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDG---FFSKLGD 410 (524)
T ss_pred c--cccccCchhhhcCcchhhhh-HHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccch---hhhhccc
Confidence 6 33566899999999887655 2334477888899999999999999999999999999999998322 7789999
Q ss_pred cCCcccccCCcccCCCCCCCccc-CcccccCCCCCCCchhHHHHHHHHHHHHHcCCCC-CCCCChhHHHHHhhhcCCCCC
Q 001103 1029 FGLSRIKCNTLVSGGVRGTLPWM-APELLNGSNNRVSEKVDVYSFGIAMWEIITGEEP-YANMHCGAIIGGILSNTLRPQ 1106 (1157)
Q Consensus 1029 FGLAkl~~~~~~sts~~GTp~Ym-APEVL~G~~~~yS~KSDIWSLGVILYELLTGk~P-F~g~~~eeil~~Il~~~lrpe 1106 (1157)
||.++...-. ...+....++. .+|++.. .+.+..+.|+++||..+.+.+++..- +.+.+.. .+..+ ..+.
T Consensus 411 ~~~~t~~~~~--~~~~~~~~r~~p~~~~~~e-~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~~~----~i~~~-~~p~ 482 (524)
T KOG0601|consen 411 FGCWTRLAFS--SGVFHHIDRLYPIAEILLE-DYPHLSKADIFSLGLSVDEAITGSPLSESGVQSL----TIRSG-DTPN 482 (524)
T ss_pred ccccccccee--cccccccccccccchhhcc-ccccccccccccccccccccccCcccCcccccce----eeecc-cccC
Confidence 9988641111 11123444555 3666654 35678899999999999999998653 3322221 11111 1222
Q ss_pred CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHH
Q 001103 1107 IPERCDPEWRKLMEECWSFNPAARPSFTEITNRLRVMST 1145 (1157)
Q Consensus 1107 ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr~Lk~ 1145 (1157)
.+. ...++..+.+.++..++..||++.++..+...+..
T Consensus 483 ~~~-~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 483 LPG-LKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYRD 520 (524)
T ss_pred CCc-hHHhhhhhhhhhcCCccccchhhhhhcccchhhhh
Confidence 333 33788899999999999999999998887776654
No 444
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.99 E-value=3.8e-10 Score=126.27 Aligned_cols=200 Identities=21% Similarity=0.282 Sum_probs=138.2
Q ss_pred HHHhCCCCceeEEeeeeecCC---CCcEEEEEEeecCCcchhhhccc---cccccHHHHHHHHHHHHHHHHHHHHCC--c
Q 001103 931 IISNLHHPNVVAFYGVVPNGP---GGTMATVTEYMVNGSLRHVLARK---DRILDRRKKLMLMMDAAFGMEYLHMKN--I 1002 (1157)
Q Consensus 931 ILK~L~HPNIVkLygvf~de~---~~~LyLVMEYmeGGSL~dlLkr~---gr~L~e~qVlkIa~QLa~ALeYLHSkG--I 1002 (1157)
-|-.+.|-|||+++.+|.+.. .....++.|||..|+|..+|++. ...+......+|+-||+.||.|||+.. |
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~Ppi 199 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCcc
Confidence 445567999999999987632 34678999999999999999763 455778888899999999999999985 9
Q ss_pred eeccCCccceeeccCCCCCCeEEEEecCCcccc--cC---CcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHH
Q 001103 1003 VHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIK--CN---TLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMW 1077 (1157)
Q Consensus 1003 IHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~--~~---~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILY 1077 (1157)
+|+.+..+-|++. .++.+|+.---..... .+ .....--.+-++|.+||.-.- ...+..+|||++|+...
T Consensus 200 ihgnlTc~tifiq----~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~--tn~~~a~dIy~fgmcAl 273 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQ----HNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTT--TNTTGASDIYKFGMCAL 273 (458)
T ss_pred ccCCcchhheeec----CCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcc--cccccchhhhhhhHHHH
Confidence 9999999999998 6677776432211110 00 000111246788999997432 23467899999999999
Q ss_pred HHHcCCCCCCC-CChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1078 EIITGEEPYAN-MHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1078 ELLTGk~PF~g-~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
+|..+..--.. ......-..+..-.+- + -...=+++|.+||+-.|..||++..++.|+.
T Consensus 274 emailEiq~tnseS~~~~ee~ia~~i~~--l---en~lqr~~i~kcl~~eP~~rp~ar~llfHpl 333 (458)
T KOG1266|consen 274 EMAILEIQSTNSESKVEVEENIANVIIG--L---ENGLQRGSITKCLEGEPNGRPDARLLLFHPL 333 (458)
T ss_pred HHHHheeccCCCcceeehhhhhhhheee--c---cCccccCcCcccccCCCCCCcchhhhhcCce
Confidence 99988764222 1111111111111110 0 0112367999999999999999999998743
No 445
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.97 E-value=6.8e-09 Score=105.68 Aligned_cols=144 Identities=22% Similarity=0.230 Sum_probs=103.0
Q ss_pred EEEecccCcEEEEEEEECC-ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC--CceeEEeeeeecCC-CCcE
Q 001103 880 LQELGSGTFGTVYRGKWRG-TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH--PNVVAFYGVVPNGP-GGTM 955 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~kG-t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H--PNIVkLygvf~de~-~~~L 955 (1157)
++.|+.|.++.||+++..+ ..+++|+....... .....+.+|.++++.+.+ ..+++++.+..... .+..
T Consensus 3 ~~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~-------~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~ 75 (223)
T cd05154 3 VRQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL-------PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTP 75 (223)
T ss_pred ceecCCCccceEEEEEecCCcceEEEeCCCcccC-------cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCc
Confidence 3678999999999998865 78999987654211 013456789999999965 44567776654421 1356
Q ss_pred EEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH------------------------------------
Q 001103 956 ATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM------------------------------------ 999 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS------------------------------------ 999 (1157)
++||||++|.++.+.+.. ..+++.....++.+++.+|.+||+
T Consensus 76 ~~v~e~i~G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (223)
T cd05154 76 FYVMERVDGRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDE 153 (223)
T ss_pred eEEEEEeCCEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccc
Confidence 899999999988776532 235566666677777777777773
Q ss_pred --------------------CCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 1000 --------------------KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 1000 --------------------kGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
..++|+|++|.|||++.+ ..+.+.|+||+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~--~~~~~~iID~e~~~~ 206 (223)
T cd05154 154 PPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPD--EPRVVAVLDWELATL 206 (223)
T ss_pred cHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCC--CCcEEEEEecccccc
Confidence 236999999999999821 145789999998753
No 446
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.96 E-value=4.4e-09 Score=111.00 Aligned_cols=151 Identities=18% Similarity=0.165 Sum_probs=108.4
Q ss_pred EEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC--CceeEEeeeeecCCCCcEE
Q 001103 879 ELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH--PNVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H--PNIVkLygvf~de~~~~Ly 956 (1157)
.+..|-+|+-+.|+++.+.|+.+.||.-..+......-+..-...+..+|+++|.++.- -..+++|.+-.. .-.
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~----~~~ 86 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY----GGQ 86 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC----CCe
Confidence 56789999999999999999998888654443333333333345677889999998853 233455443222 236
Q ss_pred EEEEeecC-Ccchhhhcccccccc-HHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 957 TVTEYMVN-GSLRHVLARKDRILD-RRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 957 LVMEYmeG-GSL~dlLkr~gr~L~-e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
|+|||++| .++.+++......-. ......++.++-..+.-||..+|||+||..+||++..++ ....+.|+|||++..
T Consensus 87 i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~-~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 87 IYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDG-NQITPILIDFGLSSV 165 (229)
T ss_pred EEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCC-CcCceEEEeecchhc
Confidence 78999987 467777755432222 223367788888999999999999999999999998554 555678999999864
No 447
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.88 E-value=2.4e-08 Score=119.85 Aligned_cols=163 Identities=20% Similarity=0.272 Sum_probs=120.5
Q ss_pred CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccc
Q 001103 897 RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDR 976 (1157)
Q Consensus 897 kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr 976 (1157)
.+.+|.|++.+...- .......+-++.|+.|+||||+++++.+.. .+++|||+|.+. .|..++++.+
T Consensus 36 ~~~~vsVF~~~~~~~--------~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~--~~~~ylvTErV~--Pl~~~lk~l~- 102 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNG--------EVTELAKRAVKRLKTLRHPNILSYLDTTEE--EGTLYLVTERVR--PLETVLKELG- 102 (690)
T ss_pred cCCceEEEEEeCCCc--------hhhHHHHHHHHHhhhccCchhhhhhhhhcc--cCceEEEeeccc--cHHHHHHHhH-
Confidence 567788888775421 123445667788999999999999999887 569999999984 5666666533
Q ss_pred cccHHHHHHHHHHHHHHHHHHH-HCCceeccCCccceeeccCCCCCCeEEEEecCCcccccCCc-ccCCCCCCCcccCcc
Q 001103 977 ILDRRKKLMLMMDAAFGMEYLH-MKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTL-VSGGVRGTLPWMAPE 1054 (1157)
Q Consensus 977 ~L~e~qVlkIa~QLa~ALeYLH-SkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~-~sts~~GTp~YmAPE 1054 (1157)
...+...+.||+.||.||| +.+++|++|.-+-|+++ ..|..||++|.++....... ......--..|..|+
T Consensus 103 ---~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn----~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~ 175 (690)
T KOG1243|consen 103 ---KEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVN----ESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPE 175 (690)
T ss_pred ---HHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEc----CCCcEEEeeeEEEeccccCCcccccchhhhcccChh
Confidence 4456667899999999998 56899999999999999 78899999999875432211 111111223477787
Q ss_pred cccCCCCCCCchhHHHHHHHHHHHHHcCC
Q 001103 1055 LLNGSNNRVSEKVDVYSFGIAMWEIITGE 1083 (1157)
Q Consensus 1055 VL~G~~~~yS~KSDIWSLGVILYELLTGk 1083 (1157)
.+... ....|.|.|||++++++.|.
T Consensus 176 ~~~~s----~~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 176 EIDPS----EWSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred hcCcc----ccchhhhhHHHHHHHHhCcc
Confidence 76532 23479999999999999993
No 448
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.85 E-value=8.9e-08 Score=110.39 Aligned_cols=259 Identities=15% Similarity=0.166 Sum_probs=168.5
Q ss_pred EEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhC-CCCceeEEeee-----eecCCC
Q 001103 879 ELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNL-HHPNVVAFYGV-----VPNGPG 952 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L-~HPNIVkLygv-----f~de~~ 952 (1157)
..+.||+|+-+.+|-.-.-+..|| |+..+..-.. ..+ -+..|.+. .||-+-.-+.| +-.+..
T Consensus 15 ~gr~LgqGgea~ly~l~e~~d~VA-KIYh~Pppa~--------~aq---k~a~la~~p~~p~~~~rvaWPqa~L~G~~~~ 82 (637)
T COG4248 15 PGRPLGQGGEADLYTLGEVRDQVA-KIYHAPPPAA--------QAQ---KVAELAATPDAPLLNYRVAWPQATLHGGRRG 82 (637)
T ss_pred CCccccCCccceeeecchhhchhh-eeecCCCchH--------HHH---HHHHhccCCCCcchhhhhcccHHHhhCCCcc
Confidence 346799999999995433333344 7766542110 111 11222222 45543321111 111123
Q ss_pred CcEEEEEEeecCCcchhhhcc------ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEE
Q 001103 953 GTMATVTEYMVNGSLRHVLAR------KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKV 1026 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL~dlLkr------~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKL 1026 (1157)
..+.++|..+.+..--..+.+ .-....|...++.++.|+.+...||..|.+-+|+.++|+|++ +.+.|.|
T Consensus 83 ~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs----d~~~V~L 158 (637)
T COG4248 83 KVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS----DDSKVVL 158 (637)
T ss_pred ceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee----cCceEEE
Confidence 347788888877533222211 223367889999999999999999999999999999999998 7788999
Q ss_pred EecCCcccccCCcccCCCCCCCcccCccccc-CC--CCCCCchhHHHHHHHHHHHHHcC-CCCCCCCChh-----HHHHH
Q 001103 1027 GDFGLSRIKCNTLVSGGVRGTLPWMAPELLN-GS--NNRVSEKVDVYSFGIAMWEIITG-EEPYANMHCG-----AIIGG 1097 (1157)
Q Consensus 1027 iDFGLAkl~~~~~~sts~~GTp~YmAPEVL~-G~--~~~yS~KSDIWSLGVILYELLTG-k~PF~g~~~e-----eil~~ 1097 (1157)
.|-..-....+.......+|...|.+||..+ +. ...-+...|.|.||++||+||.| ++||.+.... ..-..
T Consensus 159 VdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~ 238 (637)
T COG4248 159 VDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETD 238 (637)
T ss_pred EcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhh
Confidence 9866444444555555678999999999865 11 11235668999999999999986 9999875421 01011
Q ss_pred hhhcC----------CCC---CCC-CCCcHHHHHHHHHHhccC--CCCCCCHHHHHHHHHHHHHHHhhcccc
Q 001103 1098 ILSNT----------LRP---QIP-ERCDPEWRKLMEECWSFN--PAARPSFTEITNRLRVMSTALQTKRRN 1153 (1157)
Q Consensus 1098 Il~~~----------lrp---eip-~~iSpeLrdLIkrCLqkD--PskRPSaeELLe~Lr~Lk~aLesksRn 1153 (1157)
|..+. +.+ .+| .-+++.+..|..+|+..- +.-|||++.++..|-.+...+.++-++
T Consensus 239 Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~C~v~ 310 (637)
T COG4248 239 IAHGRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKKCTVS 310 (637)
T ss_pred hhcceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhhhhhc
Confidence 21111 110 111 236788999999999743 568999999999999999888776554
No 449
>smart00666 PB1 PB1 domain. Phox and Bem1p domain, present in many eukaryotic cytoplasmic signalling proteins. The domain adopts a beta-grasp fold, similar to that found in ubiquitin and Ras-binding domains. A motif, variously termed OPR, PC and AID, represents the most conserved region of the majority of PB1 domains, and is necessary for PB1 domain function. This function is the formation of PB1 domain heterodimers, although not all PB1 domain pairs associate.
Probab=98.80 E-value=2.4e-08 Score=90.29 Aligned_cols=75 Identities=45% Similarity=0.709 Sum_probs=65.8
Q ss_pred CCceeecCceEEEEccCCCCHHHHHHHHHhhcCC---CceEEEeCCCCCCCcEEeecChhHHHHHHHHHHHhhhcCCCCe
Q 001103 202 GKLRYVGGETRIISIRKSLTWEELMRKTSAICNQ---PHTIKYQLPGEDLDALISVCSDEDLHHMIEEYQEQERIGGSQR 278 (1157)
Q Consensus 202 ~~l~YvGG~triv~v~r~~~f~~l~~kl~~~~~~---~~~lkYqLP~edLD~LisV~~DeDL~~m~~eydr~~~~~~~~r 278 (1157)
.+++| ||++|.+.|+++++|.+|+.++.+.++. .+.|||+ .||-| +|++++|+||..|++.+.+.. ...
T Consensus 4 vK~~~-~~~~~~~~~~~~~s~~dL~~~i~~~~~~~~~~~~l~Y~--Dedgd-~v~l~sd~Dl~~a~~~~~~~~----~~~ 75 (81)
T smart00666 4 VKLRY-GGETRRLSVPRDISFEDLRSKVAKRFGLDNQSFTLKYQ--DEDGD-LVSLTSDEDLEEAIEEYDSLG----SKK 75 (81)
T ss_pred EEEEE-CCEEEEEEECCCCCHHHHHHHHHHHhCCCCCCeEEEEE--CCCCC-EEEecCHHHHHHHHHHHHHcC----Cce
Confidence 35677 8999999999999999999999999875 6899999 77766 999999999999999987753 357
Q ss_pred EEEEEe
Q 001103 279 LRIFLV 284 (1157)
Q Consensus 279 lR~FLF 284 (1157)
||+++|
T Consensus 76 l~l~v~ 81 (81)
T smart00666 76 LRLHVF 81 (81)
T ss_pred EEEEeC
Confidence 999886
No 450
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.75 E-value=1e-07 Score=100.33 Aligned_cols=133 Identities=24% Similarity=0.185 Sum_probs=82.3
Q ss_pred EEEEEEE-CCceEEEEEEeccccc-----------CC-------ChhHHHHHHHHHHHHHHHHhCCCC--ceeEEeeeee
Q 001103 890 TVYRGKW-RGTDIAIKRIKKSCFL-----------GR-------SSEQEWLIKEFWREAHIISNLHHP--NVVAFYGVVP 948 (1157)
Q Consensus 890 tVYlAr~-kGt~VAVKVIkk~~l~-----------~r-------~~e~e~likqflrEIkILK~L~HP--NIVkLygvf~ 948 (1157)
.||.|.. +|..+|||+.+..... .+ ............+|.+.|+++..- ++++.+.+..
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~ 80 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNR 80 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEET
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeC
Confidence 3898887 6888999987653111 00 112233345678899999999755 5777776632
Q ss_pred cCCCCcEEEEEEeec--CCcchhhhccccccccHHHHHHHHHHHHHHHHH-HHHCCceeccCCccceeeccCCCCCCeEE
Q 001103 949 NGPGGTMATVTEYMV--NGSLRHVLARKDRILDRRKKLMLMMDAAFGMEY-LHMKNIVHFDLKCDNLLVNLRDPQRPICK 1025 (1157)
Q Consensus 949 de~~~~LyLVMEYme--GGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeY-LHSkGIIHRDLKPENILLd~dd~e~g~VK 1025 (1157)
-+|||||++ |..+..+... . ++......++.+++..+.. +|..||+|+||.+.|||++ .. .+.
T Consensus 81 ------~~ivME~I~~~G~~~~~l~~~-~--~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~----~~-~~~ 146 (188)
T PF01163_consen 81 ------NVIVMEYIGEDGVPLPRLKDV-D--LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVD----DG-KVY 146 (188)
T ss_dssp ------TEEEEE--EETTEEGGCHHHC-G--GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEE----TT-CEE
T ss_pred ------CEEEEEecCCCccchhhHHhc-c--ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEee----cc-eEE
Confidence 278999998 6555443322 1 1123445567777774444 6899999999999999997 33 899
Q ss_pred EEecCCccccc
Q 001103 1026 VGDFGLSRIKC 1036 (1157)
Q Consensus 1026 LiDFGLAkl~~ 1036 (1157)
|+|||.+....
T Consensus 147 iIDf~qav~~~ 157 (188)
T PF01163_consen 147 IIDFGQAVDSS 157 (188)
T ss_dssp E--GTTEEETT
T ss_pred EEecCcceecC
Confidence 99999886543
No 451
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.71 E-value=3e-07 Score=101.47 Aligned_cols=147 Identities=20% Similarity=0.090 Sum_probs=96.8
Q ss_pred CcEEEEEEEECCceEEEEEEecccccCC-Chh--HHHHHHHHHHHHHHHHhCCCC--ceeEEeeeeecCC---CCcEEEE
Q 001103 887 TFGTVYRGKWRGTDIAIKRIKKSCFLGR-SSE--QEWLIKEFWREAHIISNLHHP--NVVAFYGVVPNGP---GGTMATV 958 (1157)
Q Consensus 887 sFGtVYlAr~kGt~VAVKVIkk~~l~~r-~~e--~e~likqflrEIkILK~L~HP--NIVkLygvf~de~---~~~LyLV 958 (1157)
....|++..+.|+.|.||+......... +.. ...-...+.+|...+.+|..- ..+...++..... ....+||
T Consensus 34 ~~rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LV 113 (268)
T PRK15123 34 EGRRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFII 113 (268)
T ss_pred CCceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEE
Confidence 3344778888899999997754321100 000 000011367888888877422 2223333332211 2347899
Q ss_pred EEeecCC-cchhhhccc-cccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccC---CCCCCeEEEEecCCcc
Q 001103 959 TEYMVNG-SLRHVLARK-DRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLR---DPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 959 MEYmeGG-SL~dlLkr~-gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~d---d~e~g~VKLiDFGLAk 1033 (1157)
||++++. +|.+++... ....+......++.+++..+.-||..||+|+||++.|||++.+ ..+...+.|+||+.+.
T Consensus 114 te~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 114 TEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRAQ 193 (268)
T ss_pred EeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEECCccc
Confidence 9999886 788887532 2334566777889999999999999999999999999999732 2245789999999874
No 452
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.70 E-value=4.8e-07 Score=106.56 Aligned_cols=214 Identities=15% Similarity=0.167 Sum_probs=151.3
Q ss_pred CcEEEEEEEE--CCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCC--CCcEEEEEEee
Q 001103 887 TFGTVYRGKW--RGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGP--GGTMATVTEYM 962 (1157)
Q Consensus 887 sFGtVYlAr~--kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~--~~~LyLVMEYm 962 (1157)
--.+.|++.. +|..|.+|++........ .+...-+++++++.|+|+|++..+|.... +..+++|++|.
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~--------nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYy 359 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST--------NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYY 359 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc--------ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecC
Confidence 3456888876 688899999843221111 12234467899999999999998886322 44789999999
Q ss_pred cC-Ccchhhhcc--------------ccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEE
Q 001103 963 VN-GSLRHVLAR--------------KDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVG 1027 (1157)
Q Consensus 963 eG-GSL~dlLkr--------------~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLi 1027 (1157)
++ ++|+++... .+...++..+|.++.||+.||.++|+.|+.-+-|.|.+||++ .+.+++|.
T Consensus 360 P~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~----G~~RIriS 435 (655)
T KOG3741|consen 360 PSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT----GKMRIRIS 435 (655)
T ss_pred CCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee----CcceEEEe
Confidence 86 366655321 234578899999999999999999999999999999999998 55688998
Q ss_pred ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCC-CCCCChhHH-HHHhhhcCCCC
Q 001103 1028 DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEP-YANMHCGAI-IGGILSNTLRP 1105 (1157)
Q Consensus 1028 DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~P-F~g~~~eei-l~~Il~~~lrp 1105 (1157)
..|......+... |.+++ -.+-|.=.||.+++.|.+|..- +........ +..
T Consensus 436 ~C~i~Dvl~~d~~-------------~~le~-----~Qq~D~~~lG~ll~aLAt~~~ns~~~d~~~~s~~~~-------- 489 (655)
T KOG3741|consen 436 GCGIMDVLQEDPT-------------EPLES-----QQQNDLRDLGLLLLALATGTENSNRTDSTQSSHLTR-------- 489 (655)
T ss_pred cccceeeecCCCC-------------cchhH-----HhhhhHHHHHHHHHHHhhcccccccccchHHHHHHH--------
Confidence 8887655443321 22322 2346999999999999999543 111111111 121
Q ss_pred CCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHH
Q 001103 1106 QIPERCDPEWRKLMEECWSFNPAARPSFTEITNRL 1140 (1157)
Q Consensus 1106 eip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~L 1140 (1157)
+....+.+++++|..+....+++ -++.+++.++
T Consensus 490 -I~~~yS~D~rn~v~yl~s~~~~~-ksI~~llp~~ 522 (655)
T KOG3741|consen 490 -ITTTYSTDLRNVVEYLESLNFRE-KSIQDLLPMI 522 (655)
T ss_pred -hhhhhhHHHHHHHHHHHhcCccc-ccHHHHHHHH
Confidence 23346789999999999999987 6777777654
No 453
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.54 E-value=4.5e-07 Score=95.37 Aligned_cols=110 Identities=23% Similarity=0.166 Sum_probs=81.1
Q ss_pred HHHHHHHHHHHhCCC--CceeEEeeeeecCC--CCcEEEEEEeecCC-cchhhhccccccccHHHHHHHHHHHHHHHHHH
Q 001103 923 KEFWREAHIISNLHH--PNVVAFYGVVPNGP--GGTMATVTEYMVNG-SLRHVLARKDRILDRRKKLMLMMDAAFGMEYL 997 (1157)
Q Consensus 923 kqflrEIkILK~L~H--PNIVkLygvf~de~--~~~LyLVMEYmeGG-SL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYL 997 (1157)
.+..+|...+..|.. -.+++.+++..... ....++|+|++++. +|.+++..... ++......++.+++..+.-|
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~-~~~~~~~~ll~~l~~~i~~l 134 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ-LDPSQRRELLRALARLIAKL 134 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc-cchhhHHHHHHHHHHHHHHH
Confidence 456778887777742 22334444443321 12458999999884 78888865333 56667788899999999999
Q ss_pred HHCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 998 HMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 998 HSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
|++||+|+|+++.|||++.++ ....+.|+||+-++.
T Consensus 135 H~~gi~H~Dl~~~NILv~~~~-~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 135 HDAGIYHGDLNPSNILVDPDD-GQYRFYLIDLDRMRF 170 (206)
T ss_pred HHCcCCCCCCCcccEEEeCCC-CceeEEEEcchhcee
Confidence 999999999999999998443 445899999998754
No 454
>PF00564 PB1: PB1 domain; InterPro: IPR000270 The Phox and Bem1p domain, is present in many eukaryotic cytoplasmic signalling proteins. The domain adopts a beta-grasp fold, similar to that found in ubiquitin and Ras-binding domains. A motif, variously termed OPR, PC and AID, represents the most conserved region of the majority of PB1 domains, and is necessary for PB1 domain function. This function is the formation of PB1 domain heterodimers, although not all PB1 domain pairs associate.; GO: 0005515 protein binding; PDB: 1IPG_A 1IP9_A 2KFK_A 1WMH_A 1VD2_A 1WI0_A 1OEY_C 1PQS_A 1Q1O_A 1TZ1_A ....
Probab=98.29 E-value=2.5e-06 Score=77.36 Aligned_cols=74 Identities=36% Similarity=0.609 Sum_probs=60.2
Q ss_pred eeecCceEEEEccCCCCHHHHHHHHHhhcCC---CceEEEeCCCCCCCcEEeecChhHHHHHHHHHHHhhhcCCCCeEEE
Q 001103 205 RYVGGETRIISIRKSLTWEELMRKTSAICNQ---PHTIKYQLPGEDLDALISVCSDEDLHHMIEEYQEQERIGGSQRLRI 281 (1157)
Q Consensus 205 ~YvGG~triv~v~r~~~f~~l~~kl~~~~~~---~~~lkYqLP~edLD~LisV~~DeDL~~m~~eydr~~~~~~~~rlR~ 281 (1157)
+|.|+.+|++.+++.++|.+|+.++++.++. .+.|+|+ .||- .+|++++|+||..|++.+.+. ...+|||
T Consensus 7 ~~~~~~~~~~~~~~~~s~~~L~~~i~~~~~~~~~~~~l~Y~--D~dg-D~V~i~sd~Dl~~a~~~~~~~----~~~~lrl 79 (84)
T PF00564_consen 7 RYGGDIRRIISLPSDVSFDDLRSKIREKFGLLDEDFQLKYK--DEDG-DLVTISSDEDLQEAIEQAKES----GSKTLRL 79 (84)
T ss_dssp EETTEEEEEEEECSTSHHHHHHHHHHHHHTTSTSSEEEEEE--ETTS-SEEEESSHHHHHHHHHHHHHC----TTSCEEE
T ss_pred EECCeeEEEEEcCCCCCHHHHHHHHHHHhCCCCccEEEEee--CCCC-CEEEeCCHHHHHHHHHHHHhc----CCCcEEE
Confidence 3333344569999999999999999999885 6778887 5444 799999999999999999886 3358999
Q ss_pred EEee
Q 001103 282 FLVS 285 (1157)
Q Consensus 282 FLFp 285 (1157)
|+..
T Consensus 80 ~v~~ 83 (84)
T PF00564_consen 80 FVQD 83 (84)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9874
No 455
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.24 E-value=4.1e-07 Score=109.82 Aligned_cols=146 Identities=21% Similarity=0.261 Sum_probs=104.8
Q ss_pred HHHHHHHHHHHHC-CceeccCCccceeeccCCCCCCeEEEEecCCcccccCCcc----------cCCCCCCCcccCcccc
Q 001103 988 MDAAFGMEYLHMK-NIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLV----------SGGVRGTLPWMAPELL 1056 (1157)
Q Consensus 988 ~QLa~ALeYLHSk-GIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~----------sts~~GTp~YmAPEVL 1056 (1157)
.+++.||.|+|.. ++||+.|.|++|.++ ..+.+||+.|+++........ ..-..-...|.|||++
T Consensus 106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~n----a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~ 181 (700)
T KOG2137|consen 106 GNVADGLAFLHRSAKVVHGNIQPEAIVVN----ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYL 181 (700)
T ss_pred hcccchhhhhccCcceeecccchhheeec----cCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhh
Confidence 3455899999976 899999999999999 888999999998764332111 0111245679999999
Q ss_pred cCCCCCCCchhHHHHHHHHHHHHHc-CCCCCCCCChhH--HHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCH
Q 001103 1057 NGSNNRVSEKVDVYSFGIAMWEIIT-GEEPYANMHCGA--IIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSF 1133 (1157)
Q Consensus 1057 ~G~~~~yS~KSDIWSLGVILYELLT-Gk~PF~g~~~ee--il~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSa 1133 (1157)
.+. ..+.++|+|||||++|.+.. |+.-+....... .......+.-.......+++++++=|.+++..++..||++
T Consensus 182 ~~~--~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~rp~~ 259 (700)
T KOG2137|consen 182 LGT--TNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVRPTL 259 (700)
T ss_pred ccc--cccccccceeeeeEEEEEecCCcchhhccCCcchhhhhhcccccccccccccCcHHHHHHHHHHhcCCcccCcch
Confidence 863 56889999999999999994 555544332111 1111111222223456789999999999999999999988
Q ss_pred HHHHHH
Q 001103 1134 TEITNR 1139 (1157)
Q Consensus 1134 eELLe~ 1139 (1157)
..++..
T Consensus 260 ~~l~~~ 265 (700)
T KOG2137|consen 260 DLLLSI 265 (700)
T ss_pred hhhhcc
Confidence 877653
No 456
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.22 E-value=7.3e-06 Score=91.23 Aligned_cols=141 Identities=20% Similarity=0.051 Sum_probs=98.3
Q ss_pred eEEEEecccCcEEEEEEEE-CCceEEEEEEecccccC--------------CChhHHHHHHHHHHHHHHHHhCCCC--ce
Q 001103 878 EELQELGSGTFGTVYRGKW-RGTDIAIKRIKKSCFLG--------------RSSEQEWLIKEFWREAHIISNLHHP--NV 940 (1157)
Q Consensus 878 eILrkLGsGsFGtVYlAr~-kGt~VAVKVIkk~~l~~--------------r~~e~e~likqflrEIkILK~L~HP--NI 940 (1157)
.+..+||-|--+.||.|.. +|.++|||.=+.....- ........+....+|.++|++|.-. .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 3568899999999999998 59999999644321110 0111122334567899999999644 66
Q ss_pred eEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCC
Q 001103 941 VAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQ 1020 (1157)
Q Consensus 941 VkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e 1020 (1157)
++-+++ +...+||||++|-.|...-- +....-.++..|+.-+.-+-..||||+|+.+=|||++ +
T Consensus 174 P~P~~~------nRHaVvMe~ieG~eL~~~r~------~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~----~ 237 (304)
T COG0478 174 PKPIAW------NRHAVVMEYIEGVELYRLRL------DVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT----E 237 (304)
T ss_pred CCcccc------ccceeeeehcccceeecccC------cccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe----c
Confidence 666654 35689999999977765431 1222333444555555555589999999999999999 7
Q ss_pred CCeEEEEecCCccc
Q 001103 1021 RPICKVGDFGLSRI 1034 (1157)
Q Consensus 1021 ~g~VKLiDFGLAkl 1034 (1157)
++.+.++||-.+..
T Consensus 238 dg~~~vIDwPQ~v~ 251 (304)
T COG0478 238 DGDIVVIDWPQAVP 251 (304)
T ss_pred CCCEEEEeCccccc
Confidence 77899999998753
No 457
>PRK09902 hypothetical protein; Provisional
Probab=98.17 E-value=2.2e-05 Score=84.83 Aligned_cols=146 Identities=17% Similarity=0.108 Sum_probs=101.2
Q ss_pred ecccCcEEEEEEEECCceEEEEEEecccccCCC-hhHHHHHHHHHHHHHHHHhCCCC--ceeEEe--eeeecCCCCcEEE
Q 001103 883 LGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRS-SEQEWLIKEFWREAHIISNLHHP--NVVAFY--GVVPNGPGGTMAT 957 (1157)
Q Consensus 883 LGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~-~e~e~likqflrEIkILK~L~HP--NIVkLy--gvf~de~~~~LyL 957 (1157)
-|+|+-+.|++....|..+-+|.-.......-. .. -...|.+|+..|++|..- .+++.. +.-.....-..+|
T Consensus 26 ~~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~---g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~L 102 (216)
T PRK09902 26 YRRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPF---GRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALL 102 (216)
T ss_pred cCCCCcceEEEEEeCCcEEEEEeccCcccccccCCC---CchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEE
Confidence 356899999999888888888876532111100 11 136788999999988532 233333 2222222234678
Q ss_pred EEEeecC-Ccchhhhcccc-ccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 958 VTEYMVN-GSLRHVLARKD-RILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 958 VMEYmeG-GSL~dlLkr~g-r~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
|+|-+.+ -+|.+++.... ...+......++.+++..|.-||+.|+.|+|+-+.|||++.++ ...++++||.-++
T Consensus 103 VTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g--~~~v~lIDlEk~r 178 (216)
T PRK09902 103 VTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG--KAEAGFLDLEKSR 178 (216)
T ss_pred EEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC--CeeEEEEEhhccc
Confidence 9997764 47878775432 3456777788999999999999999999999999999997322 3459999999765
No 458
>cd05992 PB1 The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as a noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants.
Probab=98.16 E-value=1.1e-05 Score=72.81 Aligned_cols=73 Identities=36% Similarity=0.623 Sum_probs=57.8
Q ss_pred ceeecCceEEEEcc-CCCCHHHHHHHHHhhcCC---CceEEEeCCCCCCCcEEeecChhHHHHHHHHHHHhhhcCCCCeE
Q 001103 204 LRYVGGETRIISIR-KSLTWEELMRKTSAICNQ---PHTIKYQLPGEDLDALISVCSDEDLHHMIEEYQEQERIGGSQRL 279 (1157)
Q Consensus 204 l~YvGG~triv~v~-r~~~f~~l~~kl~~~~~~---~~~lkYqLP~edLD~LisV~~DeDL~~m~~eydr~~~~~~~~rl 279 (1157)
++|- |++|.+.|+ ++++|.+|+.++.+.++. .+.|||. .||- .+|++++|+||..|++.+.+ ....++
T Consensus 5 ~~~~-~~~~~~~~~~~~~s~~~L~~~i~~~~~~~~~~~~l~y~--D~e~-d~v~l~sd~Dl~~a~~~~~~----~~~~~l 76 (81)
T cd05992 5 VKYG-GEIRRFVVVSRSISFEDLRSKIAEKFGLDAVSFKLKYP--DEDG-DLVTISSDEDLEEAIEEARR----SGSKKL 76 (81)
T ss_pred EEec-CCCEEEEEecCCCCHHHHHHHHHHHhCCCCCcEEEEee--CCCC-CEEEeCCHHHHHHHHHHHhh----cCCccE
Confidence 4444 566667776 999999999999999985 4556666 5554 78999999999999999977 335689
Q ss_pred EEEEe
Q 001103 280 RIFLV 284 (1157)
Q Consensus 280 R~FLF 284 (1157)
|+|++
T Consensus 77 ~l~v~ 81 (81)
T cd05992 77 RLFVF 81 (81)
T ss_pred EEEeC
Confidence 98875
No 459
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.99 E-value=9e-07 Score=106.29 Aligned_cols=234 Identities=15% Similarity=0.158 Sum_probs=153.9
Q ss_pred eeEEEEecccCcEEEEEEEECCce-EEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCc-eeEEeeeeecCCCCc
Q 001103 877 LEELQELGSGTFGTVYRGKWRGTD-IAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPN-VVAFYGVVPNGPGGT 954 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~kGt~-VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPN-IVkLygvf~de~~~~ 954 (1157)
++....+++|++++++|.+...+. ...|++... ....-++++|.+++||| .+..++-+ +.+.+
T Consensus 244 s~~fh~fvK~altknpKkRptaeklL~h~fvs~~-------------l~~rl~~eLLdK~n~P~~~v~~~~d~--~~E~~ 308 (829)
T KOG0576|consen 244 SEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-------------LSRRLAIELLDKVNNPNPVVRYLEDY--DGEDY 308 (829)
T ss_pred hHHHHHHHHHHhcCCCccCCChhhheeceeeccc-------------hhhHHHHHHHHHccCCCCcccccccC--Ccccc
Confidence 456778999999999988764322 224443321 22345788999999999 44444433 33668
Q ss_pred EEEEEEeecCC-cchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 955 MATVTEYMVNG-SLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 955 LyLVMEYmeGG-SL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.++.|+++.++ +....+....-.+..-+...+.+.-+++|++||+--=+||| |||.. ++..|+.||+...
T Consensus 309 ~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s-----~~~~~~~~~~v~~ 379 (829)
T KOG0576|consen 309 LWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS-----EEEVKLLDFAVPP 379 (829)
T ss_pred cchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc-----ccccccccccCCc
Confidence 99999999887 33333333333355556667777888999999988778998 88885 3578999999887
Q ss_pred cccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCC--CCC
Q 001103 1034 IKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIP--ERC 1111 (1157)
Q Consensus 1034 l~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip--~~i 1111 (1157)
..........+.+|+.++|||+.+.. .+..+.|.|++|+-..+|.-|.+|-... ......+-.+.-.+.+. ..+
T Consensus 380 ~L~~~~~~~t~~~~~~~~~pev~~~~--~~~~~p~~~~~~~~~~~~ap~~pPr~~P--~~~~~~~g~~p~s~~L~~~~aw 455 (829)
T KOG0576|consen 380 QLTRTMKPRTAIGTPEPLAPEVIQEN--TIDGCPDSGSLAVSAIQMAPGLPPRSSP--PAVLPMIGNGPNSPMLTDKSAW 455 (829)
T ss_pred ccCcccccccCCCCCCCCCchhhccc--ccccCCCccCCCcchhhcCCCCCCCCCC--ccccCCCCCCCCccccchhhhc
Confidence 66655555667899999999988743 5788899999999888888888775431 11111111111011111 112
Q ss_pred cHHHH-HHHHHHhccCCCCCCCHHHHHH
Q 001103 1112 DPEWR-KLMEECWSFNPAARPSFTEITN 1138 (1157)
Q Consensus 1112 SpeLr-dLIkrCLqkDPskRPSaeELLe 1138 (1157)
++.+. ++...|+...|..|+.....+.
T Consensus 456 ~~~~~~~~~~~~~~g~P~~pkv~mgacf 483 (829)
T KOG0576|consen 456 SPVFHRDFPAPCLNGLPPTPKVHMGACF 483 (829)
T ss_pred CcccccCCcccccCCCCCCCcchhhHHH
Confidence 22222 3667777777777776655544
No 460
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.99 E-value=7.5e-05 Score=80.34 Aligned_cols=135 Identities=22% Similarity=0.207 Sum_probs=94.8
Q ss_pred CCeeEEEEecccCc-EEEEEEEECCceEEEEEEecccccCC------Chh-------HHHHHHHHHHHHHHHHhCC---C
Q 001103 875 SDLEELQELGSGTF-GTVYRGKWRGTDIAIKRIKKSCFLGR------SSE-------QEWLIKEFWREAHIISNLH---H 937 (1157)
Q Consensus 875 sdYeILrkLGsGsF-GtVYlAr~kGt~VAVKVIkk~~l~~r------~~e-------~e~likqflrEIkILK~L~---H 937 (1157)
.+++.++.||.|.- |.||+++..|..||+|+.+.-..... ... ......-|..|.+...+|+ +
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~~ 116 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAGR 116 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhccc
Confidence 58899999999999 99999999999999999433211111 000 0133456788888777774 4
Q ss_pred Cce--eEEeeeeecCC----------------CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH
Q 001103 938 PNV--VAFYGVVPNGP----------------GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM 999 (1157)
Q Consensus 938 PNI--VkLygvf~de~----------------~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS 999 (1157)
..+ |+.|||+.-.. .....||.||+.... .+.. .-+.+|.+-|..+|.
T Consensus 117 e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------~~~~----~~~~~~~~dl~~~~k 182 (207)
T PF13095_consen 117 EGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------PLQI----RDIPQMLRDLKILHK 182 (207)
T ss_pred cCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc----------ccch----hHHHHHHHHHHHHHH
Confidence 455 89999974321 113467888775533 1222 235667777899999
Q ss_pred CCceeccCCccceeeccCCCCCCeEEEEecCCc
Q 001103 1000 KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLS 1032 (1157)
Q Consensus 1000 kGIIHRDLKPENILLd~dd~e~g~VKLiDFGLA 1032 (1157)
.||+-+|+|+.|..=+ ||+|||.+
T Consensus 183 ~gI~~~Dv~~~ny~~G---------~lvDfs~~ 206 (207)
T PF13095_consen 183 LGIVPRDVKPRNYRGG---------KLVDFSSS 206 (207)
T ss_pred CCeeeccCccccccCC---------EEEecccC
Confidence 9999999999998744 79999964
No 461
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.97 E-value=0.00014 Score=79.26 Aligned_cols=144 Identities=16% Similarity=0.129 Sum_probs=93.3
Q ss_pred ccCCCeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHH-----HHHHHHHHHHhC---CCCceeEE
Q 001103 872 IKDSDLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIK-----EFWREAHIISNL---HHPNVVAF 943 (1157)
Q Consensus 872 I~~sdYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~lik-----qflrEIkILK~L---~HPNIVkL 943 (1157)
+...+|.+++.+-......|.+-..+|..+.+|..+.... ..+ +.... ...+++..+.++ .-..+..+
T Consensus 28 i~~~~~~~~kv~k~~~r~~ValIei~~~kyIlK~pr~~~~---r~e-r~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~ 103 (229)
T PF06176_consen 28 ILDNNYKIIKVFKNTKRNYVALIEIDGKKYILKEPREENR---RPE-RRFKSFFKGSEYSRLINNTDKIRNEGFTEPADP 103 (229)
T ss_pred HHhCCceEEEeecCCCccEEEEEEECCcEEEEeccchhhh---hHH-HHHHHHhccHHHHHHHHHHHHHHHcCccccccc
Confidence 4457899999999999999999999999999998765421 111 11111 112233333333 22233333
Q ss_pred eeeeecCC---CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCCC
Q 001103 944 YGVVPNGP---GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDPQ 1020 (1157)
Q Consensus 944 ygvf~de~---~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~e 1020 (1157)
|.+..-.. ....+++|||++|..|.++.. +++ .++..+..++.-||+.|+.|+|+.|.|++++ .
T Consensus 104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~-----i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----~ 170 (229)
T PF06176_consen 104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIED-----IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----N 170 (229)
T ss_pred eeeeeeeeccceeEEEEEEEEecCeecccchh-----cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----C
Confidence 32222111 124568999999988876542 222 2345667789999999999999999999997 3
Q ss_pred CCeEEEEecCCcc
Q 001103 1021 RPICKVGDFGLSR 1033 (1157)
Q Consensus 1021 ~g~VKLiDFGLAk 1033 (1157)
+.++++||+..+
T Consensus 171 -~~i~iID~~~k~ 182 (229)
T PF06176_consen 171 -NGIRIIDTQGKR 182 (229)
T ss_pred -CcEEEEECcccc
Confidence 348999998654
No 462
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=97.90 E-value=3.8e-05 Score=92.12 Aligned_cols=146 Identities=21% Similarity=0.227 Sum_probs=92.5
Q ss_pred EEecccCcEEEEEEEEC-CceEEEEEEeccccc--------------------C--C----ChhHHHHHHH------HHH
Q 001103 881 QELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFL--------------------G--R----SSEQEWLIKE------FWR 927 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~--------------------~--r----~~e~e~likq------flr 927 (1157)
..|+.++-|.||+|+++ |+.||||+.+..... . + ....+...+. +.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 67999999999999996 899999997654110 0 0 0011111222 344
Q ss_pred HHHHHHhCC-----CCc--eeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHC
Q 001103 928 EAHIISNLH-----HPN--VVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMK 1000 (1157)
Q Consensus 928 EIkILK~L~-----HPN--IVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSk 1000 (1157)
|...+.++. .|. |+++|.-+.. .-.|+|||++|-.+.++..-....++.+.+.....++ -+..+=..
T Consensus 211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~----~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~--f~~q~~~d 284 (517)
T COG0661 211 EAANAERFRENFKDDPDVYVPKVYWEYTT----RRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRA--FLRQLLRD 284 (517)
T ss_pred HHHHHHHHHHHcCCCCCeEeceeehhccC----CcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHH--HHHHHHhc
Confidence 555555442 232 3445433333 4578999999999988853322335533333332222 23444458
Q ss_pred CceeccCCccceeeccCCCCCCeEEEEecCCccccc
Q 001103 1001 NIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 1001 GIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~ 1036 (1157)
|++|.|..|.||++. .++.+.+.|||+.....
T Consensus 285 gffHaDpHpGNi~v~----~~g~i~~lDfGi~g~l~ 316 (517)
T COG0661 285 GFFHADPHPGNILVR----SDGRIVLLDFGIVGRLD 316 (517)
T ss_pred CccccCCCccceEEe----cCCcEEEEcCcceecCC
Confidence 999999999999999 66899999999876533
No 463
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.90 E-value=0.00029 Score=71.88 Aligned_cols=80 Identities=19% Similarity=0.197 Sum_probs=56.6
Q ss_pred EEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCC--ceeEEeeeeecC-CCCcEE
Q 001103 880 LQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHP--NVVAFYGVVPNG-PGGTMA 956 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HP--NIVkLygvf~de-~~~~Ly 956 (1157)
++.|+.|..+.||+....+..+++|+.... .....+.+|..+++.|... .+++++...... .....+
T Consensus 2 i~~l~~G~~n~~~~v~~~~~~~vlK~~~~~----------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~ 71 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDDGRYVLKFYRPP----------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPY 71 (239)
T ss_dssp EEEEEESSSSEEEEEEETTSEEEEEEESSH----------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEE
T ss_pred CccCCCCCeeeEEEEEECCcEEEEEEeCCC----------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccce
Confidence 578999999999999998788999986532 2245667888888887422 356666543222 234578
Q ss_pred EEEEeecCCcchh
Q 001103 957 TVTEYMVNGSLRH 969 (1157)
Q Consensus 957 LVMEYmeGGSL~d 969 (1157)
++|++++|..+..
T Consensus 72 ~~~~~i~g~~~~~ 84 (239)
T PF01636_consen 72 LLMEYIPGRPLDD 84 (239)
T ss_dssp EEEEEESSEEHHH
T ss_pred EEEEEeccccccc
Confidence 9999999987776
No 464
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.84 E-value=0.00025 Score=78.48 Aligned_cols=145 Identities=19% Similarity=0.075 Sum_probs=96.6
Q ss_pred EEEEecccCcEEEEEEEE-CCceEEEEEEecccccCCC---------------hhHHHH-HHHHHHHHHHHHhCC--CCc
Q 001103 879 ELQELGSGTFGTVYRGKW-RGTDIAIKRIKKSCFLGRS---------------SEQEWL-IKEFWREAHIISNLH--HPN 939 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~-kGt~VAVKVIkk~~l~~r~---------------~e~e~l-ikqflrEIkILK~L~--HPN 939 (1157)
+...|.+|--+.||+|.. .+..+|||+.+......+. ...+.+ .....+|..-|+++. +-.
T Consensus 52 ~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVr 131 (268)
T COG1718 52 LVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVR 131 (268)
T ss_pred eEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 456788999999999886 5788999998764222111 111111 123456777788773 455
Q ss_pred eeEEeeeeecCCCCcEEEEEEeecCCc-chhhhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeeccC
Q 001103 940 VVAFYGVVPNGPGGTMATVTEYMVNGS-LRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNLR 1017 (1157)
Q Consensus 940 IVkLygvf~de~~~~LyLVMEYmeGGS-L~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~d 1017 (1157)
+++-+.+... .|||||+...- -.-.|+.- .++......+..+++..+.-|-. .++||+||+.=|||+.
T Consensus 132 vP~Pi~~~~n------VLvMEfIg~~g~pAP~LkDv--~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-- 201 (268)
T COG1718 132 VPEPIAFRNN------VLVMEFIGDDGLPAPRLKDV--PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-- 201 (268)
T ss_pred CCCceeecCC------eEEEEeccCCCCCCCCcccC--CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE--
Confidence 5565655444 68999996541 11223221 13333566677788888887766 8999999999999996
Q ss_pred CCCCCeEEEEecCCccccc
Q 001103 1018 DPQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 1018 d~e~g~VKLiDFGLAkl~~ 1036 (1157)
.+.+.|+|||.|....
T Consensus 202 ---~~~p~iID~~QaV~~~ 217 (268)
T COG1718 202 ---DGEPYIIDVSQAVTID 217 (268)
T ss_pred ---CCeEEEEECccccccC
Confidence 4578999999986544
No 465
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=97.79 E-value=0.00019 Score=77.20 Aligned_cols=72 Identities=17% Similarity=0.253 Sum_probs=49.9
Q ss_pred EEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCc--eeEEeeeeecCCCCcEEEE
Q 001103 881 QELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPN--VVAFYGVVPNGPGGTMATV 958 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPN--IVkLygvf~de~~~~LyLV 958 (1157)
..||+|..+.||+. .+..+++|...... . ...+.+|.++++.+..-. +++.+++... .+...+|
T Consensus 7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~-----~-----~~~i~~E~~~l~~l~~~glpvP~~~~~~~~--~~~~glv 72 (226)
T TIGR02172 7 TQTGEGGNGESYTH--KTGKWMLKLYNPGF-----D-----KETIKREFDASRKVFSLGIPTPHPFDLVED--GGRLGLI 72 (226)
T ss_pred eeecCCCCcceeEe--cCCCEEEEeCCCCC-----C-----HHHHHHHHHHHHHHHHcCCCCCceEEEEec--CCeeeee
Confidence 67899999999984 35567788765421 0 134578898988885332 4566666554 4457889
Q ss_pred EEeecCCc
Q 001103 959 TEYMVNGS 966 (1157)
Q Consensus 959 MEYmeGGS 966 (1157)
||+++|.+
T Consensus 73 ~e~i~G~~ 80 (226)
T TIGR02172 73 YELIVGKR 80 (226)
T ss_pred eeecCCcc
Confidence 99999964
No 466
>cd06407 PB1_NLP A PB1 domain is present in NIN like proteins (NLP), a key enzyme in a process of establishment of symbiosis betweeen legumes and nitrogen fixing bacteria (Rhizobium). The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes like osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-inte
Probab=97.76 E-value=0.00017 Score=67.31 Aligned_cols=71 Identities=23% Similarity=0.425 Sum_probs=60.9
Q ss_pred ecCceEEEEccCCCCHHHHHHHHHhhcC----CCceEEEeCCCCCCCcEEeecChhHHHHHHHHHHHhhhcCCCCeEEEE
Q 001103 207 VGGETRIISIRKSLTWEELMRKTSAICN----QPHTIKYQLPGEDLDALISVCSDEDLHHMIEEYQEQERIGGSQRLRIF 282 (1157)
Q Consensus 207 vGG~triv~v~r~~~f~~l~~kl~~~~~----~~~~lkYqLP~edLD~LisV~~DeDL~~m~~eydr~~~~~~~~rlR~F 282 (1157)
.||+++.+.++.+++|.+|..++++.++ ..++|||. .|| .-.|+++||+||+.-++-|... ...++|||
T Consensus 7 ~~~d~~r~~l~~~~~~~~L~~~i~~r~~~~~~~~f~LkY~--Dde-gd~v~ltsd~DL~eai~i~~~~----~~~~v~l~ 79 (82)
T cd06407 7 YGEEKIRFRLPPSWGFTELKQEIAKRFKLDDMSAFDLKYL--DDD-EEWVLLTCDADLEECIDVYRSS----GSHTIRLL 79 (82)
T ss_pred eCCeEEEEEcCCCCCHHHHHHHHHHHhCCCCCCeeEEEEE--CCC-CCeEEeecHHHHHHHHHHHHHC----CCCeEEEE
Confidence 3889999999999999999999999986 36899999 666 8899999999999888766553 45789999
Q ss_pred Ee
Q 001103 283 LV 284 (1157)
Q Consensus 283 LF 284 (1157)
+-
T Consensus 80 v~ 81 (82)
T cd06407 80 VH 81 (82)
T ss_pred ee
Confidence 74
No 467
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.72 E-value=0.00013 Score=77.41 Aligned_cols=131 Identities=27% Similarity=0.318 Sum_probs=92.4
Q ss_pred eeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCcee-EEeeeeecCCCCcE
Q 001103 877 LEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVV-AFYGVVPNGPGGTM 955 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIV-kLygvf~de~~~~L 955 (1157)
.+..+.||+|.+|.||++.|.|..+|+|+-+.... ...+..|+++|+.+.-.++- ++|.+-.+
T Consensus 24 ~~v~~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~----------r~~l~kEakiLeil~g~~~~p~vy~yg~~------ 87 (201)
T COG2112 24 LRVEKELAKGTTSVVYLGEWRGGEVALKVRRRDSP----------RRNLEKEAKILEILAGEGVTPEVYFYGED------ 87 (201)
T ss_pred hhhhhhhhcccccEEEEeeccCceEEEEEecCCcc----------hhhHHHHHHHHHHhhhcCCCceEEEechh------
Confidence 34567899999999999999999999998765421 35677899999999765543 56655333
Q ss_pred EEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCc--cceeeccCCCCCCeEEEEecCCcc
Q 001103 956 ATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKC--DNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 956 yLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKP--ENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
++.|||+.|-.|.++-... +..+++ .+++.---|-..||-|..|.- .||++. ...+.|+||.-|+
T Consensus 88 ~i~me~i~G~~L~~~~~~~----~rk~l~----~vlE~a~~LD~~GI~H~El~~~~k~vlv~-----~~~~~iIDFd~At 154 (201)
T COG2112 88 FIRMEYIDGRPLGKLEIGG----DRKHLL----RVLEKAYKLDRLGIEHGELSRPWKNVLVN-----DRDVYIIDFDSAT 154 (201)
T ss_pred hhhhhhhcCcchhhhhhcc----cHHHHH----HHHHHHHHHHHhccchhhhcCCceeEEec-----CCcEEEEEccchh
Confidence 5569999998887654321 223333 344444556777999988863 456664 4478999999887
Q ss_pred ccc
Q 001103 1034 IKC 1036 (1157)
Q Consensus 1034 l~~ 1036 (1157)
...
T Consensus 155 ~k~ 157 (201)
T COG2112 155 FKK 157 (201)
T ss_pred hcc
Confidence 443
No 468
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=97.69 E-value=0.00017 Score=86.79 Aligned_cols=150 Identities=19% Similarity=0.199 Sum_probs=93.5
Q ss_pred EEecccCcEEEEEEEEC-CceEEEEEEecccccC-------------------CChhH----HHHHHH------HHHHHH
Q 001103 881 QELGSGTFGTVYRGKWR-GTDIAIKRIKKSCFLG-------------------RSSEQ----EWLIKE------FWREAH 930 (1157)
Q Consensus 881 rkLGsGsFGtVYlAr~k-Gt~VAVKVIkk~~l~~-------------------r~~e~----e~likq------flrEIk 930 (1157)
+.||.-+.|.||+|+.+ |..||||+-+...... ....- ++..+. |.+|++
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 56999999999999984 7779999865431100 00000 111122 333443
Q ss_pred HHH----hCCCCc------eeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHC
Q 001103 931 IIS----NLHHPN------VVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMK 1000 (1157)
Q Consensus 931 ILK----~L~HPN------IVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSk 1000 (1157)
-.. .+.|-+ |+++|..+.. ...|+||||+|..+.++-.-....++...+...+.++. ++.+=..
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st----~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~--~~qIf~~ 320 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLST----KRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAY--LEQIFKT 320 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCc----ceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHH--HHHHHhc
Confidence 322 233555 6677665544 46899999999988766432233355554444433332 2334457
Q ss_pred CceeccCCccceeeccCCCCCCeEEEEecCCccccc
Q 001103 1001 NIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKC 1036 (1157)
Q Consensus 1001 GIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~ 1036 (1157)
|++|.|=.|.|||+..+......+.|.|||+.....
T Consensus 321 GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 321 GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred CCccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 899999999999998443456789999999986543
No 469
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.68 E-value=0.00034 Score=74.34 Aligned_cols=75 Identities=19% Similarity=0.108 Sum_probs=50.8
Q ss_pred EecccCc-EEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCCCcEEEEE
Q 001103 882 ELGSGTF-GTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGPGGTMATVT 959 (1157)
Q Consensus 882 kLGsGsF-GtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~~~~LyLVM 959 (1157)
.|-.|.. ..||+....+..+.||+..... ...+.+|+++++.+. +--+++++++... .+..++||
T Consensus 5 ~~~~g~~~~~v~~~~~~~~~~~vk~~~~~~-----------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~--~~~~~lv~ 71 (244)
T cd05150 5 RVTEGQSGATVYRLDGKNPGLYLKIAPSGP-----------TYELEREAERLRWLAGKLPVPEVIDYGSD--DGRAWLLT 71 (244)
T ss_pred ecCCCCCcCeEEEEcCCCCcEEEEecCCCc-----------ccchHHHHHHHHHHHhcCCCCeEEEEEec--CCccEEEE
Confidence 3444555 7899987776678888765431 124557888888773 4446677777655 34678899
Q ss_pred EeecCCcchh
Q 001103 960 EYMVNGSLRH 969 (1157)
Q Consensus 960 EYmeGGSL~d 969 (1157)
|+++|.+|..
T Consensus 72 e~i~G~~l~~ 81 (244)
T cd05150 72 SAVPGVPAAA 81 (244)
T ss_pred EeeCCccHhH
Confidence 9999987753
No 470
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=97.62 E-value=5e-06 Score=106.61 Aligned_cols=239 Identities=15% Similarity=0.078 Sum_probs=156.5
Q ss_pred EEEEEEECCc---eEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEEeecCCc
Q 001103 890 TVYRGKWRGT---DIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTEYMVNGS 966 (1157)
Q Consensus 890 tVYlAr~kGt---~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVMEYmeGGS 966 (1157)
.-++++|-++ -+.+|+.+...+ ....+.+.+....|...++...|+++...+.-.........+..++|+.+|.
T Consensus 1241 ~~~R~k~Lr~kid~Fk~~I~ke~d~---e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~ 1317 (2724)
T KOG1826|consen 1241 FHFRNKWLRSKIDWFKFSIYKEYDF---ENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGK 1317 (2724)
T ss_pred eeeccchHhhhhceeEEEeehhhhH---HHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhH
Confidence 3346666322 245565543321 1122333444555666677789999999888777666667899999999999
Q ss_pred chhhhcccc---ccccHHHHHHHHHHHHHHHHHHHHCC-----ceeccCCccceeeccCCCCCCeEEEEecCCcccccCC
Q 001103 967 LRHVLARKD---RILDRRKKLMLMMDAAFGMEYLHMKN-----IVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNT 1038 (1157)
Q Consensus 967 L~dlLkr~g---r~L~e~qVlkIa~QLa~ALeYLHSkG-----IIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~ 1038 (1157)
+.+++-+.- ..+....+.....+.+.+..-+|++. .+|++||+-|.+|. .+..+|+.++|+.+...+.
T Consensus 1318 ~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIV----tny~v~~gk~gLdKIknp~ 1393 (2724)
T KOG1826|consen 1318 LFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIV----TNYNVKLGKGGLDKIKNPV 1393 (2724)
T ss_pred HHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhhhhcccee----cCCcccccccccccccCch
Confidence 999886532 23444445444445466777777652 79999999999998 7788999999999843333
Q ss_pred -cccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHH
Q 001103 1039 -LVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRK 1117 (1157)
Q Consensus 1039 -~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrd 1117 (1157)
.......+++.|++|++.+.- .++.++|+|.+|+.+|++..|..+|...- ...+..++++.....++...|.+...
T Consensus 1394 ~sf~Gl~l~sp~~v~qli~N~i--k~t~rsdilr~s~~ly~rs~~n~~fi~fl-q~~Lkgiidn~tf~sIe~l~pgdaNv 1470 (2724)
T KOG1826|consen 1394 LSFFGLELCSPIYVLQLIKNEI--KFTKRSDILRRSLSLYLRSDGNAYFIFFL-QPALKGIIDNHTFFSIEKLKPGDANV 1470 (2724)
T ss_pred HhhhhhhhCCHHHHHHHHHHHH--hhhhHHHHHHHHHHHHHHhcccHHHHHHH-HHHHcCcccccccccccccCCCcccH
Confidence 334556789999999998743 56778999999999999999988875321 22333333333333444444444444
Q ss_pred HHHHHhccCCCCCCCHHHHHH
Q 001103 1118 LMEECWSFNPAARPSFTEITN 1138 (1157)
Q Consensus 1118 LIkrCLqkDPskRPSaeELLe 1138 (1157)
+...+|-+....||.-...+.
T Consensus 1471 e~~~~Ll~K~~~rp~q~isls 1491 (2724)
T KOG1826|consen 1471 EALHRLLWKYMERPGQYISLS 1491 (2724)
T ss_pred HHHHHHHHHhhhcchhhhhcc
Confidence 445555555566666555444
No 471
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.54 E-value=0.00096 Score=71.34 Aligned_cols=144 Identities=20% Similarity=0.179 Sum_probs=95.4
Q ss_pred EEEecccCcEEEEEEEECCceEEEEEEecccccCCChh--------HHHHHHHHHHHHHHHHhCC------CCceeEEee
Q 001103 880 LQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSE--------QEWLIKEFWREAHIISNLH------HPNVVAFYG 945 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e--------~e~likqflrEIkILK~L~------HPNIVkLyg 945 (1157)
...||+|+.-.||.--.+ ....||++.......+... ......+..+|+.....+. +..|.++||
T Consensus 6 ~~~i~~G~~R~cy~HP~d-p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G 84 (199)
T PF10707_consen 6 SDLIAQGGERDCYQHPDD-PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG 84 (199)
T ss_pred CcccccCCCceEEECCCC-CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence 356999999999964433 3467898877641111000 0111345667777666665 889999999
Q ss_pred eeecCCCCcEEEEEEeecC------CcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCC
Q 001103 946 VVPNGPGGTMATVTEYMVN------GSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDP 1019 (1157)
Q Consensus 946 vf~de~~~~LyLVMEYmeG------GSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~ 1019 (1157)
+.++ .....+|+|.+.. .+|.+++++.. ++. .... .+-.-.+||-+.+|+.+||+|.||++...+.
T Consensus 85 ~veT--~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~--~~~-~~~~---~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~ 156 (199)
T PF10707_consen 85 FVET--NLGLGLVVELIRDADGNISPTLEDYLKEGG--LTE-ELRQ---ALDEFKRYLLDHHIVIRDLNPHNIVVQRRDS 156 (199)
T ss_pred EEec--CCceEEEEEEEECCCCCcCccHHHHHHcCC--ccH-HHHH---HHHHHHHHHHHcCCeecCCCcccEEEEecCC
Confidence 9988 4467889998754 25777775433 444 3322 3334467889999999999999999986654
Q ss_pred CCCeEEEEe-cCCc
Q 001103 1020 QRPICKVGD-FGLS 1032 (1157)
Q Consensus 1020 e~g~VKLiD-FGLA 1032 (1157)
....+.|+| ||..
T Consensus 157 ~~~~lvlIDG~G~~ 170 (199)
T PF10707_consen 157 GEFRLVLIDGLGEK 170 (199)
T ss_pred CceEEEEEeCCCCc
Confidence 444788887 5543
No 472
>PLN02876 acyl-CoA dehydrogenase
Probab=97.54 E-value=0.0011 Score=83.57 Aligned_cols=82 Identities=16% Similarity=0.262 Sum_probs=56.6
Q ss_pred EEEEecccCcEEEEEEEECC----ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCce--eEEeeeeecCC
Q 001103 879 ELQELGSGTFGTVYRGKWRG----TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNV--VAFYGVVPNGP 951 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~kG----t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNI--VkLygvf~de~ 951 (1157)
.++.|+.|.+..+|+....+ ..+++|+........ ....+.+|.++|+.|. |+++ ++++.++.+..
T Consensus 42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~-------~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~ 114 (822)
T PLN02876 42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQ-------SAHAVEREYQVLRALGEHTDVPVPKVYCLCTDAS 114 (822)
T ss_pred eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCc-------cHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCC
Confidence 46889999999999987754 357777654321111 0235778999999995 6654 78887765532
Q ss_pred -CCcEEEEEEeecCCcc
Q 001103 952 -GGTMATVTEYMVNGSL 967 (1157)
Q Consensus 952 -~~~LyLVMEYmeGGSL 967 (1157)
.+..|+||||++|..+
T Consensus 115 v~G~~flVME~v~G~~~ 131 (822)
T PLN02876 115 VIGTAFYIMEYLEGRIF 131 (822)
T ss_pred cCCCceEEEEecCCccc
Confidence 2467899999998654
No 473
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.53 E-value=0.00025 Score=90.44 Aligned_cols=204 Identities=18% Similarity=0.178 Sum_probs=141.4
Q ss_pred HHHHHHHHHHHHhCCCCceeEEeeeeecCC-CC-cEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHH
Q 001103 922 IKEFWREAHIISNLHHPNVVAFYGVVPNGP-GG-TMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHM 999 (1157)
Q Consensus 922 ikqflrEIkILK~L~HPNIVkLygvf~de~-~~-~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS 999 (1157)
+....-|+..+.++.|+|++.++.+-.... .+ .+.+..++|..-++...+...+ ..+....+.+..+++.||.|+|+
T Consensus 226 i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~-~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 226 IQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG-SIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc-ccCHHHHHHHHHHHhhhHHHHHH
Confidence 444556788889999999999998865432 12 2334557777778877775443 47888888899999999999999
Q ss_pred CCceeccCCcc---ceeeccCCCCCCeEEEE--ecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHH
Q 001103 1000 KNIVHFDLKCD---NLLVNLRDPQRPICKVG--DFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGI 1074 (1157)
Q Consensus 1000 kGIIHRDLKPE---NILLd~dd~e~g~VKLi--DFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGV 1074 (1157)
....|.-|... +-..+ ..+.+.++ ||+.++............-+..|.+||.........+...|+|.+|.
T Consensus 305 ~~l~~v~L~~s~~~~~~~~----~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~~lgl 380 (1351)
T KOG1035|consen 305 LSLEHVVLSASSSKESTVD----GEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLWCLGL 380 (1351)
T ss_pred hccceeEEecccccccccC----ccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHHHHHH
Confidence 96555544433 22222 45566666 89888766665555556677788999988755444455579999999
Q ss_pred HHHHHHcCCCCCCCCChhHHHHHhhhcCCCCCCCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHHHH
Q 001103 1075 AMWEIITGEEPYANMHCGAIIGGILSNTLRPQIPERCDPEWRKLMEECWSFNPAARPSFTEITNRLR 1141 (1157)
Q Consensus 1075 ILYELLTGk~PF~g~~~eeil~~Il~~~lrpeip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~Lr 1141 (1157)
.+..+..|..+-... .....+ .+......+.+++.+|+..++++|+++.+++.+.-
T Consensus 381 l~~~~~~~~~i~~~~---~~~~~~--------l~~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f 436 (1351)
T KOG1035|consen 381 LLLQLSQGEDISEKS---AVPVSL--------LDVLSTSELLDALPKCLDEDSEERLSALELLTHPF 436 (1351)
T ss_pred HHhhhhhcCcccccc---cchhhh--------hccccchhhhhhhhhhcchhhhhccchhhhhhchh
Confidence 999999876542211 111111 12222226788999999999999999999998754
No 474
>cd06408 PB1_NoxR The PB1 domain is present in the Epichloe festucae NoxR protein (NADPH oxidase regulator), a key regulator of NADPH oxidase isoform, NoxA. NoxA is essential for growth control of the fungal endophyte in plant tissue in the process of symbiotic interaction between a fungi and its plant host. The Epichloe festucae p67(phox)-like regulator, NoxR, dispensable in culture but essential in plants for the symbiotic interaction. Plants infected with a noxR deletion mutant show severe stunting and premature senescence, whereas hyphae in the meristematic tissues show increased branching leading to increased fungal colonization of pseudostem and leaf blade tissue. The PB1 domain is a modular domain mediating specific protein-protein interactions which a play role in many critical cell processes such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is
Probab=97.44 E-value=0.00054 Score=64.77 Aligned_cols=72 Identities=21% Similarity=0.354 Sum_probs=59.7
Q ss_pred cCceEEEEccCCCCHHHHHHHHHhhcC--CCceEEEeCCCCCCCcEEeecChhHHHHHHHHHHHhhhcCC--CCeEEEEE
Q 001103 208 GGETRIISIRKSLTWEELMRKTSAICN--QPHTIKYQLPGEDLDALISVCSDEDLHHMIEEYQEQERIGG--SQRLRIFL 283 (1157)
Q Consensus 208 GG~triv~v~r~~~f~~l~~kl~~~~~--~~~~lkYqLP~edLD~LisV~~DeDL~~m~~eydr~~~~~~--~~rlR~FL 283 (1157)
+|++|++.||.+|+|.+|..|+.+.|+ ..++|||+ .| ...|++++++||+-.+.-+....+..+ -+|+-+.+
T Consensus 10 ~~Dv~~i~v~~~i~f~dL~~kIrdkf~~~~~~~iKyk--DE--GD~iti~sq~DLd~Ai~~a~~~~~~~~~~~~~~e~w~ 85 (86)
T cd06408 10 QDDTRYIMIGPDTGFADFEDKIRDKFGFKRRLKIKMK--DD--GDMITMGDQDDLDMAIDTARSEARKQGSDMGKLEIWV 85 (86)
T ss_pred cCcEEEEEcCCCCCHHHHHHHHHHHhCCCCceEEEEE--cC--CCCccccCHHHHHHHHHHHHHHHHhhcccccceeeec
Confidence 788999999999999999999999998 57899999 44 799999999999999988765444333 26766654
No 475
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.32 E-value=0.0018 Score=69.02 Aligned_cols=76 Identities=16% Similarity=0.207 Sum_probs=45.5
Q ss_pred EEEecccCcE-EEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCC---ceeEEeeeeecCCC-Cc
Q 001103 880 LQELGSGTFG-TVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHP---NVVAFYGVVPNGPG-GT 954 (1157)
Q Consensus 880 LrkLGsGsFG-tVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HP---NIVkLygvf~de~~-~~ 954 (1157)
++.|+.|+.. .||+. +..+.+|+..... ....+.+|.+++..|... -+++.+......+. ..
T Consensus 2 ~~~~~~gG~~n~vy~~---~~~~VlR~~~~~~----------~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~ 68 (235)
T cd05155 2 IEPVDSGGTDNATFRL---GDDMSVRLPSAAG----------YAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPW 68 (235)
T ss_pred ceeccCCCcccceEEc---CCceEEEcCCccc----------hHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCc
Confidence 3567766666 58875 3456777543210 124677899998887531 34455544332211 24
Q ss_pred EEEEEEeecCCcch
Q 001103 955 MATVTEYMVNGSLR 968 (1157)
Q Consensus 955 LyLVMEYmeGGSL~ 968 (1157)
.+++|++++|.++.
T Consensus 69 ~~~l~~~i~G~~l~ 82 (235)
T cd05155 69 PWSVYRWLEGETAT 82 (235)
T ss_pred ceEEEEeecCCCCC
Confidence 58899999997774
No 476
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.17 E-value=0.0016 Score=68.76 Aligned_cols=97 Identities=20% Similarity=0.135 Sum_probs=77.7
Q ss_pred HHHHHHHhCCC-CceeEEeeeeecCCCCcEEEEEEeecCCcchhh---hccccccccHHHHHHHHHHHHHHHHHHHH---
Q 001103 927 REAHIISNLHH-PNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHV---LARKDRILDRRKKLMLMMDAAFGMEYLHM--- 999 (1157)
Q Consensus 927 rEIkILK~L~H-PNIVkLygvf~de~~~~LyLVMEYmeGGSL~dl---Lkr~gr~L~e~qVlkIa~QLa~ALeYLHS--- 999 (1157)
.|.-+++.+++ +++++++|.+-. +++.||...+++... +.+. ...+|..+.+|+.+++..+++|+.
T Consensus 8 ~E~lll~~l~~~~~~pk~lG~CG~------~~v~E~~~~~~~~~~~~~l~~~-~~~~w~~R~~iA~~lL~~l~~l~~~~~ 80 (188)
T PF12260_consen 8 NEPLLLQLLQGSEPFPKLLGSCGR------FYVVEYVGAGSLYGIYRPLSQF-LQSPWEQRAKIALQLLELLEELDHGPL 80 (188)
T ss_pred cHHHHHHHcCCCCCCCCeeeECCC------EEEEEeecCccccccccccccc-cccCHHHHHHHHHHHHHHHHHHhcCCC
Confidence 47788888976 699999999855 669999987766432 1111 126889999999999999999997
Q ss_pred CCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 1000 KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 1000 kGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
..+.-.|++|+|+-++ +++.+|++|...+..
T Consensus 81 ~~~~lcDv~~~nfgv~----~~~~lk~iDld~v~~ 111 (188)
T PF12260_consen 81 GFFYLCDVSPDNFGVN----DDGRLKLIDLDDVFV 111 (188)
T ss_pred CcEEEeecchHHeEEe----CCCcEEEEechhcch
Confidence 3577889999999998 677899999997654
No 477
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.11 E-value=0.0041 Score=65.60 Aligned_cols=73 Identities=16% Similarity=0.218 Sum_probs=47.0
Q ss_pred EEEecccCcEEEEEEEEC---CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC-CCceeEEeeeeecCCCCcE
Q 001103 880 LQELGSGTFGTVYRGKWR---GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH-HPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~k---Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~-HPNIVkLygvf~de~~~~L 955 (1157)
++.|..|-...||+.... +..|++|+....... .-...+|+.+++.+. +.-.++++.....
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~---------~~d~~~E~~~~~~l~~~gl~P~v~~~~~~------ 67 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL---------IIDRERELRIHKLLSKHGLAPKLYATFQN------ 67 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc---------eecHHHHHHHHHHHHhCCCCCeEEEEeCC------
Confidence 567888999999998875 467888866532110 011236788888774 3334555554322
Q ss_pred EEEEEeecCCcc
Q 001103 956 ATVTEYMVNGSL 967 (1157)
Q Consensus 956 yLVMEYmeGGSL 967 (1157)
.++|||++|.++
T Consensus 68 ~~l~e~i~G~~l 79 (235)
T cd05157 68 GLIYEFIPGRTL 79 (235)
T ss_pred cEEEEeeCCCcC
Confidence 379999999766
No 478
>cd06405 PB1_Mekk2_3 The PB1 domain is present in the two mitogen-activated protein kinase kinases MEKK2 and MEKK3 which are two members of the signaling kinase cascade involved in angiogenesis and early cardiovascular development. The PB1 domain of MEKK2 (and/or MEKK3) interacts with the PB1 domain of another member of the kinase cascade Map2k5. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, f
Probab=97.10 E-value=0.0021 Score=59.39 Aligned_cols=70 Identities=30% Similarity=0.486 Sum_probs=60.5
Q ss_pred cCceEEEEccCCCCHHHHHHHHHhhcCCCceEEEeCCCCCCCcEEeecChhHHHHHHHHHHHhhhcCCCCeEEEEEe
Q 001103 208 GGETRIISIRKSLTWEELMRKTSAICNQPHTIKYQLPGEDLDALISVCSDEDLHHMIEEYQEQERIGGSQRLRIFLV 284 (1157)
Q Consensus 208 GG~triv~v~r~~~f~~l~~kl~~~~~~~~~lkYqLP~edLD~LisV~~DeDL~~m~~eydr~~~~~~~~rlR~FLF 284 (1157)
-||.||+.++|.+.|.||..|+...+|..+.+-|-.-. -||.+.|.|||+.-|+-.|+. +.-..||+.|-
T Consensus 8 ~gEKRIi~f~RPvkf~dl~~kv~~afGq~mdl~ytn~e----L~iPl~~Q~DLDkAie~ld~s---~~~ksLRilL~ 77 (79)
T cd06405 8 NGEKRIIQFPRPVKFKDLQQKVTTAFGQPMDLHYTNNE----LLIPLKNQEDLDRAIELLDRS---PHMKSLRILLS 77 (79)
T ss_pred cCceEEEecCCCccHHHHHHHHHHHhCCeeeEEEeccc----EEEeccCHHHHHHHHHHHccC---ccccceeEeEe
Confidence 58999999999999999999999999999999998432 799999999999999999982 22245888775
No 479
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=96.72 E-value=0.0073 Score=65.15 Aligned_cols=133 Identities=16% Similarity=0.119 Sum_probs=74.6
Q ss_pred ecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCCc-eeEEeeeeecCCCCcEEEEEEe
Q 001103 883 LGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHPN-VVAFYGVVPNGPGGTMATVTEY 961 (1157)
Q Consensus 883 LGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HPN-IVkLygvf~de~~~~LyLVMEY 961 (1157)
+..|-...+|+....+..+++|+....... .--...+|..+++.+.... .++++.... -++||||
T Consensus 4 ~~~G~tn~~y~~~~~~~~~vlR~~~~~~~~--------~~~~r~~E~~~l~~l~~~g~~P~~i~~~~------~~~v~e~ 69 (256)
T TIGR02721 4 LSGGLTNRSWRIEHPGISFVWRPQSPVCKA--------LGVDRQREYQILQALSALGLAPKPILVNE------HWLLVEW 69 (256)
T ss_pred CCCcCcCCeEEEEeCCccEEEeeCCccccc--------ccCcHHHHHHHHHHHHhcCCCCceEEEeC------CEEEEEe
Confidence 556888899998877778888865432110 0012346778888875322 344544432 2689999
Q ss_pred ecCCcchhh--------------hc---cc---cccccHH-HHHHHHHHH---------HHHHHHHHHC--------Cce
Q 001103 962 MVNGSLRHV--------------LA---RK---DRILDRR-KKLMLMMDA---------AFGMEYLHMK--------NIV 1003 (1157)
Q Consensus 962 meGGSL~dl--------------Lk---r~---gr~L~e~-qVlkIa~QL---------a~ALeYLHSk--------GII 1003 (1157)
++|..+... +. .. +..++.. .+..+..++ ...++.+-.. .++
T Consensus 70 i~G~~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 149 (256)
T TIGR02721 70 LEGEVITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPL 149 (256)
T ss_pred ccCcccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeee
Confidence 998765321 11 10 1111111 111111111 1112222221 489
Q ss_pred eccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 1004 HFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 1004 HRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
|+|+.|.|||++ .++ +.|+||..+..
T Consensus 150 H~Dl~~~Nil~~----~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 150 HMDVHAYNLVVT----PQG-LKLIDWEYASD 175 (256)
T ss_pred cCCCCcCcEEEe----CCC-CEEEeccccCc
Confidence 999999999998 333 78999998754
No 480
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=96.58 E-value=0.021 Score=62.54 Aligned_cols=141 Identities=17% Similarity=0.106 Sum_probs=82.6
Q ss_pred eEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCC--ceeEEeeeeec----CC
Q 001103 878 EELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHP--NVVAFYGVVPN----GP 951 (1157)
Q Consensus 878 eILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HP--NIVkLygvf~d----e~ 951 (1157)
.-++.|..|....+|+....+..+++|+.... . ...+..|+++++.|.+- .+++.+..... .-
T Consensus 17 ~~i~~i~~G~~n~~y~v~~~~~~~vLr~~~~~-----~------~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~ 85 (296)
T cd05153 17 LSFEGISAGIENTNYFVTTDSGRYVLTLFEKV-----S------AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSEL 85 (296)
T ss_pred hheecccCccccceEEEEeCCCcEEEEEcCCC-----C------hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeee
Confidence 34677888888999998877778999976531 1 13455677777777432 24454432110 11
Q ss_pred CCcEEEEEEeecCCcchh----hhc----------cc--c--------ccccHHHH--H--------HHHHHHHHHHHHH
Q 001103 952 GGTMATVTEYMVNGSLRH----VLA----------RK--D--------RILDRRKK--L--------MLMMDAAFGMEYL 997 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~d----lLk----------r~--g--------r~L~e~qV--l--------kIa~QLa~ALeYL 997 (1157)
.+..++||++++|..+.. .+. .. . ....+... . .....+..++.++
T Consensus 86 ~~~~~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l 165 (296)
T cd05153 86 AGKPAALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQ 165 (296)
T ss_pred CCceEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHH
Confidence 345689999999876532 100 00 0 00010000 0 0111122344555
Q ss_pred HH-------CCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 998 HM-------KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 998 HS-------kGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.+ .+++|+|+.|.|||++ .+..+.|+||+.+.
T Consensus 166 ~~~~~~~~~~~l~HgD~~~~Nil~~----~~~~~~iIDfe~a~ 204 (296)
T cd05153 166 DAFDPSDLPRGVIHADLFRDNVLFD----GDELSGVIDFYFAC 204 (296)
T ss_pred HhhhhhcCCCcCCccCcCcccEEEe----CCceEEEeehhhhc
Confidence 53 3699999999999998 55567899999874
No 481
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=96.51 E-value=0.013 Score=64.57 Aligned_cols=74 Identities=19% Similarity=0.345 Sum_probs=46.4
Q ss_pred EEEecccCcEEEEEEEEC--------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCCC-ceeEEeeeeecC
Q 001103 880 LQELGSGTFGTVYRGKWR--------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHHP-NVVAFYGVVPNG 950 (1157)
Q Consensus 880 LrkLGsGsFGtVYlAr~k--------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~HP-NIVkLygvf~de 950 (1157)
++.|..|-...||+.... +..+++|+....... .....+|.++++.+... -.+++++.+..
T Consensus 3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~---------~~~r~~E~~~~~~l~~~g~~P~~~~~~~~- 72 (302)
T cd05156 3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVEL---------LIDRERELVVFARLSERNLGPKLYGIFPN- 72 (302)
T ss_pred EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcc---------eechHHHHHHHHHHHhCCCCCceEEEeCC-
Confidence 466777888899988764 367888886543100 12345677777777422 23456655532
Q ss_pred CCCcEEEEEEeecCCcch
Q 001103 951 PGGTMATVTEYMVNGSLR 968 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~ 968 (1157)
.+||||++|..+.
T Consensus 73 -----~~v~e~i~G~~l~ 85 (302)
T cd05156 73 -----GRIEEFIPSRTLT 85 (302)
T ss_pred -----CchhheeCCCcCC
Confidence 3589999887664
No 482
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=96.46 E-value=0.028 Score=66.19 Aligned_cols=83 Identities=17% Similarity=0.107 Sum_probs=53.1
Q ss_pred EEEEecccCcEEEEEEEECC--ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC---CCceeEEeeeeecCCCC
Q 001103 879 ELQELGSGTFGTVYRGKWRG--TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH---HPNVVAFYGVVPNGPGG 953 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~kG--t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~---HPNIVkLygvf~de~~~ 953 (1157)
..+.||.|.+..||++...+ +.+.||.-........... .....+...|.+.|+.+. -..++++|.+.. .
T Consensus 30 ~~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~w-pl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~----~ 104 (401)
T PRK09550 30 TAREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESW-PLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE----E 104 (401)
T ss_pred eeeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccc-cccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC----C
Confidence 45789999999999998854 3799997542211000000 011345566777777762 346788887733 3
Q ss_pred cEEEEEEeecCCc
Q 001103 954 TMATVTEYMVNGS 966 (1157)
Q Consensus 954 ~LyLVMEYmeGGS 966 (1157)
..++||||+++..
T Consensus 105 ~~~lVME~L~~~~ 117 (401)
T PRK09550 105 LAVTVMEDLSDHK 117 (401)
T ss_pred CCEEEEecCCCcc
Confidence 4689999998643
No 483
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=96.46 E-value=0.02 Score=63.61 Aligned_cols=143 Identities=17% Similarity=0.129 Sum_probs=81.2
Q ss_pred eeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC--CceeEEeeeee----cC
Q 001103 877 LEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH--PNVVAFYGVVP----NG 950 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H--PNIVkLygvf~----de 950 (1157)
...++.++.|....||+.+..+..+.+|+..... . ...+..|.+++..|.. -.+++.+.... ..
T Consensus 24 ~~~i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~----~------~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~ 93 (307)
T TIGR00938 24 LLSLKGIAEGVENSNYLLTTDVGRYILTLYEKRV----K------AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLST 93 (307)
T ss_pred ceeccccCCccccceEEEEeCCCcEEEEEecCCC----C------HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehh
Confidence 4456778888888999987766678888765421 0 1233456666666632 22444443211 11
Q ss_pred CCCcEEEEEEeecCCcchhh--------------hcccccc----------cc-HHHHH------------HHHHHHHHH
Q 001103 951 PGGTMATVTEYMVNGSLRHV--------------LARKDRI----------LD-RRKKL------------MLMMDAAFG 993 (1157)
Q Consensus 951 ~~~~LyLVMEYmeGGSL~dl--------------Lkr~gr~----------L~-e~qVl------------kIa~QLa~A 993 (1157)
-.+..+++|+|++|..+... ++..... ++ +.... .....+...
T Consensus 94 ~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~ 173 (307)
T TIGR00938 94 LAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKE 173 (307)
T ss_pred cCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHH
Confidence 13467899999998654211 0100000 00 00000 001122334
Q ss_pred HHHHHH-------CCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 994 MEYLHM-------KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 994 LeYLHS-------kGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
++++.. .+++|+|+.+.||+++ .++.+.|+||+.+.
T Consensus 174 ~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~----~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 174 LDYLDKFWPRDLPRGVIHADLFPDNVLFD----GDSVKGVIDFYFAC 216 (307)
T ss_pred HHHHHhhhhhcCCCccCCCCCCcCcEEEE----CCceEEEeeccccc
Confidence 555543 5799999999999998 44567899999874
No 484
>PRK05231 homoserine kinase; Provisional
Probab=96.44 E-value=0.032 Score=61.94 Aligned_cols=78 Identities=9% Similarity=0.021 Sum_probs=44.4
Q ss_pred EEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC--CceeEEeeee----ecCCC
Q 001103 879 ELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH--PNVVAFYGVV----PNGPG 952 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H--PNIVkLygvf----~de~~ 952 (1157)
.++.|+.|....+|+.+..+..+++|+.... . ...+..|..+++.|.. -.+++.+... ...-.
T Consensus 26 ~~~~l~~G~~n~~y~v~t~~g~~vLK~~~~~---~--------~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~ 94 (319)
T PRK05231 26 SLKGIAEGIENSNFFLTTTQGEYVLTLFERL---T--------AEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELA 94 (319)
T ss_pred ccchhccccccceEEEEeCCCcEEEEEeccC---C--------hHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeC
Confidence 3566888888899998876667899976521 0 1222334455555421 1133333211 00113
Q ss_pred CcEEEEEEeecCCcc
Q 001103 953 GTMATVTEYMVNGSL 967 (1157)
Q Consensus 953 ~~LyLVMEYmeGGSL 967 (1157)
+..+++|+|++|..+
T Consensus 95 g~~~~l~~~l~G~~~ 109 (319)
T PRK05231 95 GKPAAIVTFLEGKWP 109 (319)
T ss_pred CEEEEEEEecCCCCC
Confidence 457899999998754
No 485
>cd06404 PB1_aPKC PB1 domain is an essential modular domain of the atypical protein kinase C (aPKC) which in complex with Par6 and Par3 proteins is crucial for establishment of apical-basal polarity of animal cells. PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi,
Probab=96.41 E-value=0.02 Score=54.06 Aligned_cols=72 Identities=26% Similarity=0.450 Sum_probs=58.4
Q ss_pred ecCceEEEEccCCCCHHHHHHHHHhhcC----CCceEEEeCCCCCCCcEEeecChhHHHHHHHHHHHhhhcCCCCeEEEE
Q 001103 207 VGGETRIISIRKSLTWEELMRKTSAICN----QPHTIKYQLPGEDLDALISVCSDEDLHHMIEEYQEQERIGGSQRLRIF 282 (1157)
Q Consensus 207 vGG~triv~v~r~~~f~~l~~kl~~~~~----~~~~lkYqLP~edLD~LisV~~DeDL~~m~~eydr~~~~~~~~rlR~F 282 (1157)
-+|+-+|..++.+++|.+|..|+..+|. .++++||- .||= -+|++++|++|+.-+..|.... .+-|-+-
T Consensus 7 y~gdi~it~~d~~~s~e~L~~~v~~~c~~~~~q~ft~kw~--DEEG-Dp~tiSS~~EL~EA~rl~~~n~----~~~l~ih 79 (83)
T cd06404 7 YNGDIMITSIDPSISLEELCNEVRDMCRFHNDQPFTLKWI--DEEG-DPCTISSQMELEEAFRLYELNK----DSELNIH 79 (83)
T ss_pred ecCcEEEEEcCCCcCHHHHHHHHHHHhCCCCCCcEEEEEE--CCCC-CceeecCHHHHHHHHHHHHhcC----cccEEEE
Confidence 3667789999999999999999999995 58999998 4333 4799999999988887776643 3467777
Q ss_pred Eee
Q 001103 283 LVS 285 (1157)
Q Consensus 283 LFp 285 (1157)
+||
T Consensus 80 vfp 82 (83)
T cd06404 80 VFP 82 (83)
T ss_pred ecC
Confidence 776
No 486
>cd06401 PB1_TFG The PB1 domain found in TFG protein, an oncogenic gene product and fusion partner to nerve growth factor tyrosine kinase receptor TrkA and to the tyrosine kinase ALK. The PB1 domain is a modular domain mediating specific protein-protein interaction in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The PB1 domains of TFG represent a type I/II PB1 domain. The physiological function of TFG remains unknown.
Probab=96.31 E-value=0.016 Score=54.54 Aligned_cols=53 Identities=26% Similarity=0.450 Sum_probs=44.1
Q ss_pred cCceEEEEccC-CCCHHHHHHHHHhhcC------CCceEEEeCCCCCCCcEEeecChhHHHHH
Q 001103 208 GGETRIISIRK-SLTWEELMRKTSAICN------QPHTIKYQLPGEDLDALISVCSDEDLHHM 263 (1157)
Q Consensus 208 GG~triv~v~r-~~~f~~l~~kl~~~~~------~~~~lkYqLP~edLD~LisV~~DeDL~~m 263 (1157)
|||.|.+.++. .++|.+|+..+..++. .++.|||.=+. ..||+||+++||.--
T Consensus 8 g~DiR~~~~~~~~~t~~~L~~~v~~~F~~~~~~~~~flIKYkD~d---GDlVTIts~~dL~~A 67 (81)
T cd06401 8 GDDIRRIPIHNEDITYDELLLMMQRVFRGKLGSSDDVLIKYKDED---GDLITIFDSSDLSFA 67 (81)
T ss_pred CCeEEEEeccCccccHHHHHHHHHHHhccccCCcccEEEEEECCC---CCEEEeccHHHHHHH
Confidence 99999999997 5899999999987664 37889998332 358999999999754
No 487
>cd06398 PB1_Joka2 The PB1 domain is present in the Nicotiana plumbaginifolia Joka2 protein which interacts with sulfur stress inducible UP9 protein. The PB1 domain is a modular domain mediating specific protein-protein interactions which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module
Probab=96.11 E-value=0.033 Score=53.30 Aligned_cols=71 Identities=21% Similarity=0.329 Sum_probs=55.3
Q ss_pred cCceEEEEccC-----CCCHHHHHHHHHhhcC----CCceEEEeCCCCCCCcEEeecChhHHHHHHHHHHHhhhcCCCCe
Q 001103 208 GGETRIISIRK-----SLTWEELMRKTSAICN----QPHTIKYQLPGEDLDALISVCSDEDLHHMIEEYQEQERIGGSQR 278 (1157)
Q Consensus 208 GG~triv~v~r-----~~~f~~l~~kl~~~~~----~~~~lkYqLP~edLD~LisV~~DeDL~~m~~eydr~~~~~~~~r 278 (1157)
||++|-+.++. +++|.+|..|+++.+. ..+.|||. .| =..+|.+++|+||+.-|+...+ .+...-
T Consensus 8 ~~~~rRf~l~~~~~~~d~~~~~L~~kI~~~f~l~~~~~~~l~Y~--De-dgd~V~l~~D~DL~~a~~~~~~---~~~~~~ 81 (91)
T cd06398 8 GGTLRRFTFPVAENQLDLNMDGLREKVEELFSLSPDADLSLTYT--DE-DGDVVTLVDDNDLTDAIQYFCS---GSRLNP 81 (91)
T ss_pred CCEEEEEEeccccccCCCCHHHHHHHHHHHhCCCCCCcEEEEEE--CC-CCCEEEEccHHHHHHHHHHHhc---cCCCce
Confidence 88899999985 7999999999999875 36889998 33 3479999999999988875322 333446
Q ss_pred EEEEEe
Q 001103 279 LRIFLV 284 (1157)
Q Consensus 279 lR~FLF 284 (1157)
||+++-
T Consensus 82 lrl~v~ 87 (91)
T cd06398 82 LRIDVT 87 (91)
T ss_pred EEEEEE
Confidence 888764
No 488
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=95.92 E-value=0.014 Score=70.29 Aligned_cols=158 Identities=20% Similarity=0.283 Sum_probs=99.0
Q ss_pred HHHHHHHHHHHhCCCCceeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCc
Q 001103 923 KEFWREAHIISNLHHPNVVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNI 1002 (1157)
Q Consensus 923 kqflrEIkILK~L~HPNIVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGI 1002 (1157)
.++....++++.+.|+++.+++++.... ..+..+|||++. -+|++.++... +- ..++. .+++
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~-~~r~IVV~e~~~-~Sled~~~~~~--l~-------~~s~~-------~~~~ 88 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGK-HERVIVVMEHYT-MSLEDILKTGN--LK-------DESLL-------AHGV 88 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCc-cceEEEEehhhc-cchHHHHHhcc--cc-------hhhhc-------cccc
Confidence 4566778899999999999999887654 456889999994 48988886533 11 11111 2222
Q ss_pred eeccCCccceeeccCCCCCCeEEEEecCCcccccCCcccCCCCCCCcccCcccccCCCCCCCchhHHHHHHHHHHHHHcC
Q 001103 1003 VHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKCNTLVSGGVRGTLPWMAPELLNGSNNRVSEKVDVYSFGIAMWEIITG 1082 (1157)
Q Consensus 1003 IHRDLKPENILLd~dd~e~g~VKLiDFGLAkl~~~~~~sts~~GTp~YmAPEVL~G~~~~yS~KSDIWSLGVILYELLTG 1082 (1157)
.| -|+ ++++| -++ ... |-. ..+|+|||++|.++.++.-|
T Consensus 89 ~~-----~~~-----------~~~td-~~~---t~~--------------~~~-------~~pKsdVwsl~~i~~el~L~ 127 (725)
T KOG1093|consen 89 LH-----LNI-----------IYITD-HFL---TKY--------------PSP-------IGPKSDVWSLGFIILELYLG 127 (725)
T ss_pred ce-----ehh-----------hhccc-ccc---ccC--------------CCC-------CCcchhhhhHHHHHHHHHHh
Confidence 22 122 23334 111 000 111 12379999999999999999
Q ss_pred CCCCCCCChhHHHHHhhhcCCCCC----------CCCCCcHHHHHHHHHHhccCCCCCCCHHHHHHH
Q 001103 1083 EEPYANMHCGAIIGGILSNTLRPQ----------IPERCDPEWRKLMEECWSFNPAARPSFTEITNR 1139 (1157)
Q Consensus 1083 k~PF~g~~~eeil~~Il~~~lrpe----------ip~~iSpeLrdLIkrCLqkDPskRPSaeELLe~ 1139 (1157)
...|......+....+..-...+. +-..++..+.++.+.|+...|..||...++.++
T Consensus 128 ~~l~~~~~~s~~l~~i~k~~~~d~~~~~~a~e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~ 194 (725)
T KOG1093|consen 128 ISLEAELTESEYLEILLKYYTDDQELLSTAMEHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKR 194 (725)
T ss_pred hHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHhhhHhHHHHhccCCccccccccchhHHhcC
Confidence 888776555444444432222111 112356677889999999999999977666553
No 489
>cd06396 PB1_NBR1 The PB1 domain is an essential part of NBR1 protein, next to BRCA1, a scaffold protein mediating specific protein-protein interaction with both titin protein kinase and with another scaffold protein p62. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. The NBR1 protein contains a type I PB1 domain.
Probab=95.60 E-value=0.072 Score=50.24 Aligned_cols=69 Identities=20% Similarity=0.312 Sum_probs=55.4
Q ss_pred cCceEEEEccC--CCCHHHHHHHHHhhcC-CCceEEEeCCCCCCCcEEeecChhHHHHHHHHHHHhhhcCCCCeEEEEEe
Q 001103 208 GGETRIISIRK--SLTWEELMRKTSAICN-QPHTIKYQLPGEDLDALISVCSDEDLHHMIEEYQEQERIGGSQRLRIFLV 284 (1157)
Q Consensus 208 GG~triv~v~r--~~~f~~l~~kl~~~~~-~~~~lkYqLP~edLD~LisV~~DeDL~~m~~eydr~~~~~~~~rlR~FLF 284 (1157)
||+++.+.++. +.+|.+|.+.+++.|+ ..++|||= .| =.--|+++||.||+.-++-|.|. + ..||+|+.
T Consensus 8 ~~d~~rf~~~~~~~~~~~~L~~ev~~rf~l~~f~lKYl--Dd-e~e~v~lssd~eLeE~~rl~~~~----~-~~l~~~v~ 79 (81)
T cd06396 8 NGESQSFLVSDSENTTWASVEAMVKVSFGLNDIQIKYV--DE-ENEEVSVNSQGEYEEALKSAVRQ----G-NLLQMNVY 79 (81)
T ss_pred CCeEEEEEecCCCCCCHHHHHHHHHHHhCCCcceeEEE--cC-CCCEEEEEchhhHHHHHHHHHhC----C-CEEEEEEe
Confidence 56788899988 7799999999999998 57889997 43 34689999999998777766663 2 47888875
No 490
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.54 E-value=0.1 Score=57.29 Aligned_cols=29 Identities=24% Similarity=0.354 Sum_probs=24.5
Q ss_pred CCceeccCCccceeeccCCCCCCeEEEEecCCcc
Q 001103 1000 KNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSR 1033 (1157)
Q Consensus 1000 kGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAk 1033 (1157)
.+++|+|+.+.|||++ . +.+.|+||+.+.
T Consensus 187 ~~liHgD~~~~Nil~~----~-~~i~lIDfd~~~ 215 (313)
T TIGR02906 187 RGFCHQDYAYHNILLK----D-NEVYVIDFDYCT 215 (313)
T ss_pred CceEcCCCCcccEEEe----C-CcEEEEECcccc
Confidence 4799999999999997 3 457899999764
No 491
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=95.47 E-value=0.11 Score=61.15 Aligned_cols=147 Identities=20% Similarity=0.151 Sum_probs=94.7
Q ss_pred eEEEEecccCcEEEEEEEE-CCceEEEEEEecccccCC-----------------ChhHHHHH-HHHHHHHHHHHhCCCC
Q 001103 878 EELQELGSGTFGTVYRGKW-RGTDIAIKRIKKSCFLGR-----------------SSEQEWLI-KEFWREAHIISNLHHP 938 (1157)
Q Consensus 878 eILrkLGsGsFGtVYlAr~-kGt~VAVKVIkk~~l~~r-----------------~~e~e~li-kqflrEIkILK~L~HP 938 (1157)
++-..|..|--+-||.+.- .|..+|||+++...+.-+ ....+.++ -....|++-|++|+.-
T Consensus 147 ~inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~a 226 (520)
T KOG2270|consen 147 EINGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNA 226 (520)
T ss_pred ecccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhc
Confidence 3456788899999998876 688899999876533211 11122222 2345688888888654
Q ss_pred ceeEEeeeeecCCCCcEEEEEEeecCCcch-hhhccccccccHHHHHHHHHHHHHHHHHHHH-CCceeccCCccceeecc
Q 001103 939 NVVAFYGVVPNGPGGTMATVTEYMVNGSLR-HVLARKDRILDRRKKLMLMMDAAFGMEYLHM-KNIVHFDLKCDNLLVNL 1016 (1157)
Q Consensus 939 NIVkLygvf~de~~~~LyLVMEYmeGGSL~-dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHS-kGIIHRDLKPENILLd~ 1016 (1157)
.|+----+... ...|||+|+.....- -.|+ .-.++...+..+-.+++.-+.-|-+ .++||.||.-=|+|+
T Consensus 227 GIP~PePIlLk----~hVLVM~FlGrdgw~aPkLK--d~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-- 298 (520)
T KOG2270|consen 227 GIPCPEPILLK----NHVLVMEFLGRDGWAAPKLK--DASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-- 298 (520)
T ss_pred CCCCCCceeee----cceEeeeeccCCCCcCcccc--cccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE--
Confidence 43311111111 246899999643221 1222 2235555677777777777776654 589999999999999
Q ss_pred CCCCCCeEEEEecCCcccc
Q 001103 1017 RDPQRPICKVGDFGLSRIK 1035 (1157)
Q Consensus 1017 dd~e~g~VKLiDFGLAkl~ 1035 (1157)
..+.+.|+|-+.+...
T Consensus 299 ---hdG~lyiIDVSQSVE~ 314 (520)
T KOG2270|consen 299 ---HDGKLYIIDVSQSVEH 314 (520)
T ss_pred ---ECCEEEEEEccccccC
Confidence 4679999999988643
No 492
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=95.30 E-value=0.019 Score=66.35 Aligned_cols=140 Identities=19% Similarity=0.067 Sum_probs=92.3
Q ss_pred eeEEEEecccCcEEEEEEEE-CCceEEEEEEeccc--ccCCC------------hhHHHHHHHHHHHHHHHHhCC-CC-c
Q 001103 877 LEELQELGSGTFGTVYRGKW-RGTDIAIKRIKKSC--FLGRS------------SEQEWLIKEFWREAHIISNLH-HP-N 939 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~-kGt~VAVKVIkk~~--l~~r~------------~e~e~likqflrEIkILK~L~-HP-N 939 (1157)
+.+..+||-|--+-||.+-+ .|++.++|.-+... +..-+ ....--+-...+|...|+.|. |- -
T Consensus 94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp 173 (465)
T KOG2268|consen 94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP 173 (465)
T ss_pred hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence 45678999999999999887 48998888532211 10000 000101123467888999884 32 2
Q ss_pred eeEEeeeeecCCCCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHCCceeccCCccceeeccCCC
Q 001103 940 VVAFYGVVPNGPGGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMKNIVHFDLKCDNLLVNLRDP 1019 (1157)
Q Consensus 940 IVkLygvf~de~~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSkGIIHRDLKPENILLd~dd~ 1019 (1157)
+++-+++ ...++|||++.|..|..+-+-. .... +...+..-+--|-.+|+||+|+.-=||+++
T Consensus 174 VPkpiD~------~RH~Vvmelv~g~Pl~~v~~v~----d~~~---ly~~lm~~Iv~la~~GlIHgDFNEFNimv~---- 236 (465)
T KOG2268|consen 174 VPKPIDH------NRHCVVMELVDGYPLRQVRHVE----DPPT---LYDDLMGLIVRLANHGLIHGDFNEFNIMVK---- 236 (465)
T ss_pred CCCcccc------cceeeHHHhhcccceeeeeecC----ChHH---HHHHHHHHHHHHHHcCceecccchheeEEe----
Confidence 4444443 3568999999998887654321 2222 333444445667889999999999999998
Q ss_pred CCCeEEEEecCCcc
Q 001103 1020 QRPICKVGDFGLSR 1033 (1157)
Q Consensus 1020 e~g~VKLiDFGLAk 1033 (1157)
+...++++||-...
T Consensus 237 dd~~i~vIDFPQmv 250 (465)
T KOG2268|consen 237 DDDKIVVIDFPQMV 250 (465)
T ss_pred cCCCEEEeechHhh
Confidence 66789999998654
No 493
>PRK10593 hypothetical protein; Provisional
Probab=95.12 E-value=0.17 Score=56.81 Aligned_cols=109 Identities=13% Similarity=0.039 Sum_probs=74.7
Q ss_pred CeeEEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC---CceeEEeeeeecCC-
Q 001103 876 DLEELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH---PNVVAFYGVVPNGP- 951 (1157)
Q Consensus 876 dYeILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H---PNIVkLygvf~de~- 951 (1157)
...-.+.||.|..+.||+....+..+.+|..+... . ...+.+|...|+.|.- ..++++++++....
T Consensus 15 ~~~~~~~i~~G~~~~vy~~~~~~~~~~~k~~~~~~--~--------~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~ 84 (297)
T PRK10593 15 KLSRVECISEQPYAALWALYDSQGNPMPLMARSFS--T--------PGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQS 84 (297)
T ss_pred hhheeeecCCccceeEEEEEcCCCCEEEEEecccc--c--------chHHHHHHHHHHHHccCCCCCcCcEEEEeccCCc
Confidence 34456789999999999987755567777743210 0 1467789999988843 46788888765422
Q ss_pred CCcEEEEEEeecCCcchhhhccccccccHHHHHHHHHHHHHHHHHHHHC
Q 001103 952 GGTMATVTEYMVNGSLRHVLARKDRILDRRKKLMLMMDAAFGMEYLHMK 1000 (1157)
Q Consensus 952 ~~~LyLVMEYmeGGSL~dlLkr~gr~L~e~qVlkIa~QLa~ALeYLHSk 1000 (1157)
.+..+||||+++|.++.+.. ........+..+++.+|.-||+.
T Consensus 85 ~g~~~LVmE~i~G~~~~~~~------~~~~~~~~l~~~l~~~La~LH~~ 127 (297)
T PRK10593 85 PGPDVLLLERLRGVSVEAPA------RTPERWEQLKDQIVEGLLAWHRI 127 (297)
T ss_pred CCCeEEEEeccCCEecCCCC------CCHHHHHHHHHHHHHHHHHHhCC
Confidence 35689999999998886521 12233445566777888888874
No 494
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=95.01 E-value=0.22 Score=55.54 Aligned_cols=31 Identities=19% Similarity=0.336 Sum_probs=24.3
Q ss_pred CceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 1001 NIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 1001 GIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
.++|+|+.|.|||++. .....-|+||+.+..
T Consensus 186 ~lvHGD~~~~Nilv~~---~~~~~gviDWe~a~i 216 (276)
T cd05152 186 VLVHGDLHPGHILIDE---DARVTGLIDWTEAKV 216 (276)
T ss_pred eeEeCCCCCCcEEEeC---CCCEEEEECcHhccc
Confidence 3899999999999981 133467999998753
No 495
>PLN02756 S-methyl-5-thioribose kinase
Probab=94.84 E-value=0.43 Score=56.86 Aligned_cols=81 Identities=16% Similarity=0.096 Sum_probs=52.1
Q ss_pred EEEEecccCcEEEEEEEECCceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC---CCceeEEeeeeecCCCCcE
Q 001103 879 ELQELGSGTFGTVYRGKWRGTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH---HPNVVAFYGVVPNGPGGTM 955 (1157)
Q Consensus 879 ILrkLGsGsFGtVYlAr~kGt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~---HPNIVkLygvf~de~~~~L 955 (1157)
..+.||.|....||+....+..+.||.-............ ....+...|...|+.+. -..++++|.+..+ ..
T Consensus 36 ~~~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wp-l~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded----~~ 110 (418)
T PLN02756 36 KIKEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWP-MTKERAYFEATALREHGRLCPDHVPEVYHFDRT----MA 110 (418)
T ss_pred eEEEcCCCceeeEEEEEcCCccEEEEeCCccccCCCcccc-CCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC----CC
Confidence 5788999999999998887777999975532111111000 01233344566666553 3478888888764 45
Q ss_pred EEEEEeecC
Q 001103 956 ATVTEYMVN 964 (1157)
Q Consensus 956 yLVMEYmeG 964 (1157)
+++||++++
T Consensus 111 vlvME~L~~ 119 (418)
T PLN02756 111 LIGMRYLEP 119 (418)
T ss_pred EEEEeecCC
Confidence 789999977
No 496
>PLN02236 choline kinase
Probab=94.80 E-value=0.36 Score=55.42 Aligned_cols=140 Identities=15% Similarity=0.232 Sum_probs=77.8
Q ss_pred eeEEEEecccCcEEEEEEEEC------CceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCCC-CceeEEeeeeec
Q 001103 877 LEELQELGSGTFGTVYRGKWR------GTDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLHH-PNVVAFYGVVPN 949 (1157)
Q Consensus 877 YeILrkLGsGsFGtVYlAr~k------Gt~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~H-PNIVkLygvf~d 949 (1157)
...+..|-.|-.-.+|+..+. +..|.+|+..... +..+.+ .+|..+++.+.. ---+++++.+..
T Consensus 38 ~~~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t--------~~~idR-~~E~~~~~~l~~~gl~P~~~~~~~~ 108 (344)
T PLN02236 38 ALQVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGV--------ELFFDR-DDEIRTFECMSRHGQGPRLLGRFPN 108 (344)
T ss_pred cEEEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCC--------Ceeech-HHHHHHHHHHHHcCCCCceEEEECC
Confidence 334556656889999998763 2468888765431 111122 467778877743 333455666533
Q ss_pred CCCCcEEEEEEeecCCcchhh-------h----------ccc---cc--cccHHHHHHHHHH-----------------H
Q 001103 950 GPGGTMATVTEYMVNGSLRHV-------L----------ARK---DR--ILDRRKKLMLMMD-----------------A 990 (1157)
Q Consensus 950 e~~~~LyLVMEYmeGGSL~dl-------L----------kr~---gr--~L~e~qVlkIa~Q-----------------L 990 (1157)
+ .|++|+++.+|... + ++. +. ...+..+.++..+ +
T Consensus 109 ---g---~v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l 182 (344)
T PLN02236 109 ---G---RVEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSL 182 (344)
T ss_pred ---c---eEEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHH
Confidence 2 47999988766311 0 010 00 1112222222211 1
Q ss_pred HHHHHHH----H----HCCceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 991 AFGMEYL----H----MKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 991 a~ALeYL----H----SkGIIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
...+..| . ...++|+|+++.|||++. ..+.+.|+||..+..
T Consensus 183 ~~~~~~L~~~~~~~~~~~~~cH~Dl~~~Nil~~~---~~~~~~lID~Eya~~ 231 (344)
T PLN02236 183 EDEINLLEKELSGDDQEIGFCHNDLQYGNIMIDE---ETRAITIIDYEYASY 231 (344)
T ss_pred HHHHHHHHHHhcccCCCceEEeCCCCcCcEEEeC---CCCcEEEEeehhccc
Confidence 1112222 2 125899999999999971 246799999998753
No 497
>cd06397 PB1_UP1 Uncharacterized protein 1. The PB1 domain is a modular domain mediating specific protein-protein interaction which play a role in many critical cell processes, such as osteoclastogenesis, angiogenesis, early cardiovascular development, and cell polarity. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domain, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions.
Probab=94.67 E-value=0.087 Score=49.65 Aligned_cols=56 Identities=27% Similarity=0.380 Sum_probs=45.6
Q ss_pred cCceEEEEccCCCCHHHHHHHHHhhcCC---CceEEEeCCCCCCCcEEeecChhHHHHHHHH
Q 001103 208 GGETRIISIRKSLTWEELMRKTSAICNQ---PHTIKYQLPGEDLDALISVCSDEDLHHMIEE 266 (1157)
Q Consensus 208 GG~triv~v~r~~~f~~l~~kl~~~~~~---~~~lkYqLP~edLD~LisV~~DeDL~~m~~e 266 (1157)
||+||=+++++..+|++|.+||..++.- ++.|+|- .||= -+|++++|+||+..+..
T Consensus 8 ~g~~RRf~~~~~pt~~~L~~kl~~Lf~lp~~~~~vtYi--DeD~-D~ITlssd~eL~d~~~~ 66 (82)
T cd06397 8 LGDTRRIVFPDIPTWEALASKLENLYNLPEIKVGVTYI--DNDN-DEITLSSNKELQDFYRL 66 (82)
T ss_pred CCceEEEecCCCccHHHHHHHHHHHhCCChhHeEEEEE--cCCC-CEEEecchHHHHHHHHh
Confidence 5667777799999999999999999863 5889997 4322 68999999999877653
No 498
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=94.15 E-value=0.5 Score=53.88 Aligned_cols=30 Identities=27% Similarity=0.270 Sum_probs=25.1
Q ss_pred ceeccCCccceeeccCCCCCCeEEEEecCCccc
Q 001103 1002 IVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRI 1034 (1157)
Q Consensus 1002 IIHRDLKPENILLd~dd~e~g~VKLiDFGLAkl 1034 (1157)
++|.||-+.|||++. +.+.++|+||..|..
T Consensus 184 ~CHnDl~~~NiL~~~---~~~~l~lID~EYag~ 213 (330)
T PLN02421 184 FAHNDLLSGNLMLNE---DEGKLYFIDFEYGSY 213 (330)
T ss_pred EEECCCCcccEEEeC---CCCcEEEEcccccCC
Confidence 799999999999971 345799999998753
No 499
>cd06402 PB1_p62 The PB1 domain is an essential part of p62 scaffold protein (alias sequestosome 1,SQSTM) involved in cell signaling, receptor internalization, and protein turnover. The PB1 domain is a modular domain mediating specific protein-protein interaction which play roles in many critical cell processes. A canonical PB1-PB1 interaction, which involves heterodimerization of two PB1 domains, is required for the formation of macromolecular signaling complexes ensuring specificity and fidelity during cellular signaling. The interaction between two PB1 domain depends on the type of PB1. There are three types of PB1 domains: type I which contains an OPCA motif, acidic aminoacid cluster, type II which contains a basic cluster, and type I/II which contains both an OPCA motif and a basic cluster. Interactions of PB1 domains with other protein domains have been described as noncanonical PB1-interactions. The PB1 domain module is conserved in amoebas, fungi, animals, and plants.
Probab=93.49 E-value=0.26 Score=47.10 Aligned_cols=65 Identities=25% Similarity=0.445 Sum_probs=50.0
Q ss_pred ceEEEEc--cCCCCHHHHHHHHHhhc----CCCceEEEeCCCCCCCcEEeecChhHHHHHHHHHHHhhhcCCCCeEEEEE
Q 001103 210 ETRIISI--RKSLTWEELMRKTSAIC----NQPHTIKYQLPGEDLDALISVCSDEDLHHMIEEYQEQERIGGSQRLRIFL 283 (1157)
Q Consensus 210 ~triv~v--~r~~~f~~l~~kl~~~~----~~~~~lkYqLP~edLD~LisV~~DeDL~~m~~eydr~~~~~~~~rlR~FL 283 (1157)
|-|-.++ +.+++|.+|+.++.++| +..++|||. .|| .-||++++||||.--+.... .+-||||+
T Consensus 15 EIRRf~l~~~~~~s~~~L~~~V~~~f~~l~~~~ftlky~--Dee-GDlvtIssdeEL~~A~~~~~-------~~~~RlyI 84 (87)
T cd06402 15 EIRRFAIDEDVSTSYEYLVEKVAAVFPSLRGKNFQLFWK--DEE-GDLVAFSSDEELVMALGSLN-------DDTFRIYI 84 (87)
T ss_pred ceEEEEecCCCCcCHHHHHHHHHHHccccCCCcEEEEEE--CCC-CCEEeecCHHHHHHHHHcCC-------CCcEEEEE
Confidence 5677777 44569999999999998 458999998 333 35899999999987766432 36799987
Q ss_pred e
Q 001103 284 V 284 (1157)
Q Consensus 284 F 284 (1157)
=
T Consensus 85 ~ 85 (87)
T cd06402 85 K 85 (87)
T ss_pred E
Confidence 3
No 500
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=93.20 E-value=0.29 Score=57.39 Aligned_cols=79 Identities=15% Similarity=0.097 Sum_probs=46.9
Q ss_pred EecccCcEEEEEEEECC--ceEEEEEEecccccCCChhHHHHHHHHHHHHHHHHhCC--CC-ceeEEeeeeecCCCCcEE
Q 001103 882 ELGSGTFGTVYRGKWRG--TDIAIKRIKKSCFLGRSSEQEWLIKEFWREAHIISNLH--HP-NVVAFYGVVPNGPGGTMA 956 (1157)
Q Consensus 882 kLGsGsFGtVYlAr~kG--t~VAVKVIkk~~l~~r~~e~e~likqflrEIkILK~L~--HP-NIVkLygvf~de~~~~Ly 956 (1157)
+||.|....||++...+ +.+.||.-........... .....+..-|...|+... -| .++++|.+-.+ ...
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~w-pl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e----~~~ 76 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESW-PLTLDRARIESSALIRQGEHVPHLVPRIFHFDTE----MAV 76 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCC-CCCccHHHHHHHHHHHhhccCccccCeEEEEccc----cce
Confidence 58999999999998854 4699996442211100000 001233445667776653 23 56777776333 456
Q ss_pred EEEEeecCC
Q 001103 957 TVTEYMVNG 965 (1157)
Q Consensus 957 LVMEYmeGG 965 (1157)
+|||+++..
T Consensus 77 ~vMEdL~~~ 85 (370)
T TIGR01767 77 TVMEDLSHH 85 (370)
T ss_pred ehHhhCccc
Confidence 899998543
Done!