BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001114
(1154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q51UJ9|ATG11_MAGO7 Autophagy-related protein 11 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=ATG11 PE=3 SV=3
Length = 1395
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/531 (20%), Positives = 211/531 (39%), Gaps = 84/531 (15%)
Query: 17 VHISENGHSFELDCNENSPVEAVMRFIESAAGINFNDQLVLCLDMKLEPQKLLSAYRLPS 76
V I+ +G ++D + + ++ + + I N C+ + P K L +
Sbjct: 5 VLIAHSGQRLQIDTSRLTTLDEFRSAVSRSTSIPQN-----CIIALVPPGKALRPQAIQM 59
Query: 77 DDKEVFIFNKLRLQSNSPPPSPEQVDVLEVADPPPPALSQDPHPLDDAPDPALKALPSYE 136
+ KE+F+++ R+ P SP V LE+ P P A++ P+ + D ++L S++
Sbjct: 60 E-KEIFVYDS-RMTQTGAPGSPFPVK-LEIDLPKPYAITNPPNDIIDT-----RSLESWQ 111
Query: 137 RQFRYHYHRGHAIYIRTQAKIEMCERLLREQKVQERA-------VEVGRGNLEQYYRVIN 189
FR H + E CE + +E Q A ++ NLE R
Sbjct: 112 DLFRERRVWAHRLS-------EDCEGMEKEAHDQYEAMDNMLSCLDAAVANLESVVRATE 164
Query: 190 QNYNDFMKRYSQQQRVHSDLLANFGRDIEKLRSVKLHPSL-QTATCK------------- 235
Y D K + +Q ++DL+ + +++ RS+ + ++ + T K
Sbjct: 165 NKYEDLKKWAATEQTGYNDLVTRWEQNLGLARSIPISAAMVRLMTGKDVTGAKGRPSKQA 224
Query: 236 CLLDFVKEEHLRKSAETCSSSHRQFENKVSQFKQIFDDVKRRVEELLNTRASLPIKNLEM 295
L D V + RK + R+F +++ + + E L ++N E
Sbjct: 225 TLEDLVDLDCARKEGRRAPTVLRKFNARIADLE--------KAEGRL-------MQNFEE 269
Query: 296 MIKEHQRFINEQKSIM------QSLSKDVSTVKKLVDDCLSCQLSSSLRPHDAVSALGPM 349
+ E +R I+ +S+M L +D+ + V++ + S D + A +
Sbjct: 270 LEAEFRRVIS--RSVMGHSQDATQLLQDIQALAGKVENDYRTTMDYSTSTRDLLQA-SKI 326
Query: 350 YDVHDKSHLPRMQACDRSISKLLDFCQDKKNEMNVFVHNYMQKITYVSYVIKDAKLQFPV 409
H + HLP + + +L + +N + + +M+ I VS + +Q
Sbjct: 327 AQTHTEKHLPSLHKRALEMDGMLRYAIKARNALALEQAEFMRSIADVSKL----DMQVKS 382
Query: 410 FREAMVRQDDI--FADLKLVRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAERLATKRE 467
A+ +++ F L+L+ + Y A AE +RRK + LA +A ++
Sbjct: 383 LINAIAEDEELATFDYLRLIHQVPYMYAAFTAEAIRRKEWFDKVKTDSTTLANEMALFQD 442
Query: 468 VEVRRREEFLK--ANSVYIPRDILGSMGLYDTPNQCDVNIAPSDTNLLDID 516
E +RR ++ K ++ Y P + D N+ + NLL D
Sbjct: 443 EEAKRRRKWYKTIGDTSYGPESL-----------STDNNVPGLEVNLLGED 482
>sp|Q7S055|ATG11_NEUCR Autophagy-related protein 11 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=atg-11 PE=3 SV=1
Length = 1300
Score = 40.8 bits (94), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 66/344 (19%), Positives = 134/344 (38%), Gaps = 46/344 (13%)
Query: 166 EQKVQERAVEVGRGNLEQYYRVINQNYNDFMKRYSQQQRVHSDLLANFGRDIEKLRSVKL 225
E V R ++ NLE + + Y + + + Q +S L F R + R + +
Sbjct: 11 EMDVMLRCLDAAVANLENAVKGLENKYVELKEWSTSAQAEYSALATGFDRYLSLARGIAI 70
Query: 226 HPSLQTATCK--------------CLLDFVKEEHLRKSAETCSSSHRQFENKVSQFKQ-- 269
S+ L D V E R++ + S+ R+F+++++ +
Sbjct: 71 SSSMARFMTSRDDGGWKGRPQRQSTLEDLVDLELARQAGKLAPSALRKFKDRITNLDKAA 130
Query: 270 --IFDDVKRRVEELLNT--RASLPIKNLEMMIKEHQRFINEQKSIMQSLSKDVSTVKKLV 325
+F D + + T R++L ++ +S+ L KD+ + +
Sbjct: 131 THLFQDADTLMHKFETTMSRSALS---------------HDGESL--HLLKDIEALANKI 173
Query: 326 DDCLSCQLSSSLRPHDAVSALGPMYDVHDKSHLPRMQACDRSISKLLDFCQDKKNEMNVF 385
D+ + L + D + + H + LP +Q + +L + +N +
Sbjct: 174 DNDYNVTLEYTSSTRDTLLQVSKTAAHHTERLLPSIQKRALEMGDILCYATKARNSLAAE 233
Query: 386 VHNYMQKITYVSYVIKDAKLQFPVFREAMVRQDD---IFADLKLVRGIGPAYRACLAEVV 442
+M+ IT ++ K Q + Q+D F L+L++ I Y + +AE +
Sbjct: 234 SIEFMRSITEITSDSHSVKSQI-----SETGQEDELATFDHLRLIQQIPYLYASFVAEAI 288
Query: 443 RRKASMKLYMGMAGQLAERLATKREVEVRRREEFLKA-NSVYIP 485
RR+ + + LA +A E E +RR + K+ +V+ P
Sbjct: 289 RRREWLDKVKQDSTTLANEMAIFHEEEAKRRRRWHKSIGAVFGP 332
>sp|Q4WY31|ATG11_ASPFU Autophagy-related protein 11 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=atg11
PE=3 SV=1
Length = 1264
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 141/358 (39%), Gaps = 52/358 (14%)
Query: 179 GNLEQYYRVINQNYNDFMKRYSQQQRVHSDLLANFGRDIEKLRSVKLHPSL-QTATCK-- 235
GNLE ++ ND +K +QR D +E + + K+ P L + +T K
Sbjct: 113 GNLENRFQEAQTWANDLLK----EQRAALDGWQRALTTLESIPAPKVFPFLGRPSTPKEH 168
Query: 236 ------CLLDFVKEEHLRKSAETCSSSH----RQFENKVSQFKQIFDDVKRRVEELLNTR 285
L DFV ++K+ ++ RQ ++ + I D +R +++ L +
Sbjct: 169 RDRPTGTLRDFVDANEVQKAGAEAAAESSRFARQIDDVAEAVRGITADTQRLIDDQLPSG 228
Query: 286 ASLPIKNLEMMIKEHQRFINEQKSIMQSLSKDVSTVKKLVDDCLSCQLSSSLRPHDAVSA 345
A L+ MI + + +S D V L ++ ++
Sbjct: 229 AD-AADGLQEMI-----------TFAKKISSDYEHVIALPNN------------QKTLAN 264
Query: 346 LGPMYDVHDKSHLPRMQACDRSISKLLDFCQDKKNEMNVFVHNYMQKITYVSYVIKDAKL 405
+ + H + LP M I L+ + N ++M+ I+ + + D +
Sbjct: 265 ISRLALTHTQDLLPSMLDISAEIHAGLEEAVRRHNTAMKVALDHMRTISAIELRLADVQS 324
Query: 406 QFPVFREAMVRQDDIFADLKLVRGIGPAYRACLAEVVRRKASMKLYMGMAGQLAERLATK 465
Q + Q D F + V + Y + L E VRR+ + + LAE +A
Sbjct: 325 QII----NLNVQSDAFDVVFSVYHMPMVYGSILVESVRRREFNEKMKADSLTLAEEMAVF 380
Query: 466 REVEVRRREEFLKANSVYIPRDILGSMGLYDTPNQCDVNIAPSDTNLLDIDISDLEVY 523
R+ E RRR+++LK+ +I S+ TP ++N+ D ++ +D+E Y
Sbjct: 381 RDEEQRRRKKWLKSMGDFI------SLTETTTPG-VEINLQGLDYEWPEVSRNDIESY 431
>sp|Q68CZ1|FTM_HUMAN Protein fantom OS=Homo sapiens GN=RPGRIP1L PE=1 SV=2
Length = 1315
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 829 SALADKSDQLSETQTKLKAVMEEVVMLGRELEMRQKLLDESQMNCAHLENCLHEAREEAQ 888
SA+ K QL E Q L+ + ++ G EL M+ L E ++ C LE LH +
Sbjct: 283 SAMEGKFIQLQEKQRTLRISHDALMANGDELNMQ---LKEQRLKCCSLEKQLHSMK---- 335
Query: 889 THLCAADRRASEYSALRASAVKLRGLFERLRSCVFASEGAGGFADSLRTLAQSLANSISD 948
++RR E K R L + ++ S + + + Q L I+
Sbjct: 336 ----FSERRIEELQDRINDLEKERELLKENYDKLYDSAFSAAHEEQWKLKEQQLKVQIAQ 391
Query: 949 NEDDGTAEFRKCIRVLADRVAFLSRHREELLDKNRKVELAHEQLKKELEEKKELVKTLYT 1008
E ++ +L DR+ E+L+ +NR+++L + + K++L+E K+ +K LY
Sbjct: 392 LETALKSDLTDKTEIL-DRLKTERDQNEKLVQENRELQLQYLEQKQQLDELKKRIK-LYN 449
Query: 1009 K 1009
+
Sbjct: 450 Q 450
>sp|Q9ESK9|RBCC1_MOUSE RB1-inducible coiled-coil protein 1 OS=Mus musculus GN=Rb1cc1 PE=1
SV=3
Length = 1588
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 90/233 (38%), Gaps = 25/233 (10%)
Query: 293 LEMMIKEHQRFINEQKSIMQSLSKDVSTVKKLVDDCLSCQLSSSLRPHDAVSALGPMYDV 352
L+ MI R +NEQK + Q + + L D +S+ P +S
Sbjct: 371 LDQMIASCSRLVNEQKELAQGFLANQMRAENLKD--------ASVLPDLCLS-------- 414
Query: 353 HDKSHLPRMQACDRSISKLLDFCQDKKNEMNVFVHNYMQKITYVSYVIKDAKLQFPVFRE 412
H ++ ++ KLLD Q +N ++ + +V+ A +
Sbjct: 415 ----HANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQA 470
Query: 413 AMVRQDDIFADLKLVRGIGPAYRA-CLA--EVVRRKASMKLYMGMAGQLAERLATKREVE 469
+ ++ +++V + + CLA EVVRRK +K Y AG L + E E
Sbjct: 471 LLRLVIELLERVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAE 530
Query: 470 VRRREEFLKANSVYIPRDILGSMGLYDTPNQ-CDVNIAPSDTNLLDIDISDLE 521
+RE F K R+ L GL P+ C D L DI + DL+
Sbjct: 531 KSKRESFGKLFRKSFLRNRLFK-GLDSWPSSFCTQKPRKFDCELPDISLKDLQ 582
>sp|Q8TDY2|RBCC1_HUMAN RB1-inducible coiled-coil protein 1 OS=Homo sapiens GN=RB1CC1 PE=1
SV=3
Length = 1594
Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 88/232 (37%), Gaps = 23/232 (9%)
Query: 293 LEMMIKEHQRFINEQKSIMQSLSKDVSTVKKLVDDCLSCQLSSSLRPHDAVSALGPMYDV 352
L+ MI R +NEQK + Q + + L D +S+ P +S
Sbjct: 372 LDQMIASCGRLVNEQKELAQGFLANQKRAENLKD--------ASVLPDLCLS-------- 415
Query: 353 HDKSHLPRMQACDRSISKLLDFCQDKKNEMNVFVHNYMQKITYVSYVIKDAKLQFPVFRE 412
H ++ ++ KLLD Q +N ++ + +V+ A +
Sbjct: 416 ----HANQLMIMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQA 471
Query: 413 AMVRQDDIFADLKLVRGIGPAYRA-CLA--EVVRRKASMKLYMGMAGQLAERLATKREVE 469
+ ++ +K+V + + CLA EVVRRK +K Y AG L + E E
Sbjct: 472 LLRLVIELLERVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAE 531
Query: 470 VRRREEFLKANSVYIPRDILGSMGLYDTPNQCDVNIAPSDTNLLDIDISDLE 521
+RE F K R+ L P+ C D L DI + DL+
Sbjct: 532 KSKRESFGKLFRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQ 583
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 414,699,605
Number of Sequences: 539616
Number of extensions: 17753125
Number of successful extensions: 76365
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 509
Number of HSP's that attempted gapping in prelim test: 73933
Number of HSP's gapped (non-prelim): 2862
length of query: 1154
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1025
effective length of database: 121,958,995
effective search space: 125007969875
effective search space used: 125007969875
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)