Query 001120
Match_columns 1150
No_of_seqs 384 out of 978
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 12:03:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001120.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001120hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pz4_A Protein GBS052; SPAB, G 99.2 6E-11 2.1E-15 129.3 13.6 161 93-263 28-220 (239)
2 2pz4_A Protein GBS052; SPAB, G 99.2 1.6E-10 5.5E-15 126.0 13.4 150 820-977 29-220 (239)
3 3kpt_A Collagen adhesion prote 98.9 1.4E-06 4.7E-11 100.3 32.2 63 93-156 18-83 (355)
4 3kpt_A Collagen adhesion prote 98.9 4.3E-08 1.5E-12 112.9 19.6 74 803-878 4-81 (355)
5 2x9x_A RRGB, cell WALL surface 98.9 1.6E-08 5.5E-13 119.3 15.2 148 806-956 159-401 (444)
6 2x9x_A RRGB, cell WALL surface 98.8 5.9E-08 2E-12 114.5 18.1 144 730-883 171-417 (444)
7 1cwv_A Invasin; integrin-bindi 98.7 3.4E-06 1.2E-10 101.0 30.2 296 76-408 29-378 (492)
8 2xtl_A Cell WALL surface ancho 98.6 2.3E-07 7.7E-12 109.4 14.7 144 804-956 157-407 (452)
9 2y1v_A RRGB, cell WALL surface 98.5 5.6E-07 1.9E-11 110.0 15.9 148 806-956 314-556 (605)
10 2y1v_A RRGB, cell WALL surface 98.4 3.6E-06 1.2E-10 102.9 18.4 144 730-882 326-571 (605)
11 3tkv_A FDEC fragment B, attach 98.4 2.1E-06 7.1E-11 100.8 14.6 300 93-408 18-381 (414)
12 2xtl_A Cell WALL surface ancho 98.4 4.4E-06 1.5E-10 98.5 17.0 141 734-883 177-423 (452)
13 1cwv_A Invasin; integrin-bindi 98.0 0.0003 1E-08 84.2 23.0 216 170-408 28-284 (492)
14 3irp_X URO-adherence factor A; 97.9 1.5E-05 5E-10 93.3 8.4 73 73-145 303-378 (429)
15 3tkv_A FDEC fragment B, attach 97.8 7E-05 2.4E-09 87.9 12.8 218 93-328 119-383 (414)
16 3mn8_A LP15968P; catalytic dom 97.7 4.9E-05 1.7E-09 89.7 9.0 77 275-352 337-417 (435)
17 1h8l_A Carboxypeptidase GP180 97.7 8.7E-05 3E-09 86.2 10.6 75 275-351 301-377 (380)
18 2x5p_A FBA2, fibronectin bindi 97.7 0.0001 3.5E-09 71.2 9.1 76 804-883 25-102 (121)
19 1d2p_A Collagen adhesin, CNA; 97.6 0.11 3.6E-06 59.8 33.1 295 76-417 4-354 (373)
20 2nsm_A Carboxypeptidase N cata 97.5 0.00017 5.7E-09 85.4 9.6 63 275-339 321-384 (439)
21 2x5p_A FBA2, fibronectin bindi 97.5 0.00014 4.8E-09 70.2 6.8 56 898-956 32-87 (121)
22 2pn5_A TEP1R, thioester-contai 97.4 0.044 1.5E-06 73.6 31.3 208 94-327 128-384 (1325)
23 1uwy_A Carboxypeptidase M; met 97.3 0.0003 1E-08 82.9 8.4 66 275-342 296-364 (426)
24 2hr0_A Complement C3 beta chai 97.3 0.027 9.3E-07 69.7 26.1 208 100-328 141-406 (645)
25 1d2p_A Collagen adhesin, CNA; 97.3 0.06 2.1E-06 61.8 26.8 259 23-330 46-355 (373)
26 2ww8_A RRGA, cell WALL surface 97.3 0.0004 1.4E-08 88.5 9.3 82 803-886 44-129 (893)
27 3qdh_A Fimbrial structural sub 97.1 0.0008 2.7E-08 74.9 7.7 84 804-887 156-282 (290)
28 1h8l_A Carboxypeptidase GP180 96.9 0.0013 4.6E-08 76.2 8.2 84 801-891 295-378 (380)
29 2nsm_A Carboxypeptidase N cata 96.9 0.0017 5.7E-08 76.8 9.2 64 75-154 321-384 (439)
30 3irp_X URO-adherence factor A; 96.9 0.0013 4.5E-08 76.8 7.8 55 170-240 306-370 (429)
31 3hr6_A SPAA, putative surface- 96.9 0.0025 8.5E-08 74.9 10.0 79 805-883 305-419 (436)
32 3qec_A Putative carbohydrate b 96.6 0.00097 3.3E-08 66.4 3.5 55 835-889 86-149 (150)
33 3pf2_A Cell WALL surface ancho 96.6 0.005 1.7E-07 69.4 9.6 77 806-883 181-295 (319)
34 3uxf_A Fimbrial subunit type 1 96.3 0.0033 1.1E-07 74.8 6.4 79 805-883 352-472 (488)
35 3mn8_A LP15968P; catalytic dom 96.3 0.0056 1.9E-07 72.1 8.1 86 803-895 333-421 (435)
36 1uwy_A Carboxypeptidase M; met 96.3 0.0046 1.6E-07 72.7 7.1 85 801-893 290-380 (426)
37 3kcp_A Cellulosomal-scaffoldin 96.2 0.0071 2.4E-07 66.8 7.7 68 272-339 155-232 (321)
38 2ww8_A RRGA, cell WALL surface 96.2 0.0086 3E-07 76.3 9.3 80 804-884 733-829 (893)
39 1xpn_A Hypothetical protein PA 96.0 0.0042 1.5E-07 62.8 4.1 54 836-889 107-169 (170)
40 2boy_A 3-chlorocatechol 1,2-di 95.8 0.0074 2.5E-07 65.3 5.4 48 275-322 103-169 (254)
41 2xsu_A Catechol 1,2 dioxygenas 95.8 0.015 5.1E-07 64.7 7.7 48 275-322 137-203 (312)
42 3t1w_A Four-domain fibronectin 95.7 3.5 0.00012 46.1 35.5 295 736-1051 32-350 (375)
43 2pn5_A TEP1R, thioester-contai 95.7 2.4 8.1E-05 56.9 29.9 163 129-312 71-263 (1325)
44 2azq_A Catechol 1,2-dioxygenas 95.6 0.016 5.6E-07 64.4 7.0 48 275-322 133-199 (311)
45 2bum_B Protocatechuate 3,4-dio 95.5 0.016 5.3E-07 62.4 6.4 48 275-322 79-150 (241)
46 3r8q_A Fibronectin; heparin, F 95.4 1.6 5.4E-05 47.2 22.7 195 842-1051 70-274 (290)
47 3pf2_A Cell WALL surface ancho 95.4 0.033 1.1E-06 62.7 9.0 75 898-978 186-295 (319)
48 1nkg_A Rhamnogalacturonase B; 95.3 0.047 1.6E-06 64.9 10.4 70 76-160 259-328 (508)
49 3qva_A Transthyretin-like prot 95.3 0.013 4.5E-07 55.5 4.3 59 76-142 11-72 (116)
50 2hr0_A Complement C3 beta chai 95.2 4 0.00014 50.2 27.8 159 132-313 82-281 (645)
51 1tmx_A Hydroxyquinol 1,2-dioxy 95.1 0.019 6.6E-07 63.2 5.8 49 275-323 134-200 (293)
52 3th1_A Chlorocatechol 1,2-diox 95.1 0.022 7.5E-07 61.8 6.1 49 275-323 100-167 (260)
53 2xsu_A Catechol 1,2 dioxygenas 95.1 0.038 1.3E-06 61.5 8.0 53 76-136 138-204 (312)
54 1nkg_A Rhamnogalacturonase B; 95.1 0.044 1.5E-06 65.2 9.1 66 275-344 258-327 (508)
55 1dmh_A 1,2-CTD, catechol 1,2-d 95.0 0.019 6.4E-07 63.9 5.4 48 275-322 134-202 (311)
56 3cu7_A Complement C5; Mg domai 95.0 1 3.5E-05 61.8 23.4 210 99-326 158-437 (1676)
57 3t63_M 3,4-PCD, protocatechuat 94.9 0.027 9.3E-07 60.3 6.1 48 275-322 78-149 (238)
58 2boy_A 3-chlorocatechol 1,2-di 94.8 0.033 1.1E-06 60.3 6.5 51 897-948 105-169 (254)
59 2azq_A Catechol 1,2-dioxygenas 94.8 0.051 1.7E-06 60.5 7.9 53 76-136 134-200 (311)
60 3n9t_A PNPC; phospholipid bind 94.7 0.032 1.1E-06 61.5 6.1 49 275-323 130-197 (290)
61 2g2n_A Transthyretin-like prot 94.7 0.022 7.5E-07 54.0 4.1 60 76-142 5-71 (114)
62 2bum_A Protocatechuate 3,4-dio 94.6 0.024 8.4E-07 59.7 4.8 48 275-322 53-125 (209)
63 3t63_A 3,4-PCD, protocatechuat 94.6 0.029 1E-06 58.6 5.3 49 275-323 49-117 (200)
64 3t1w_A Four-domain fibronectin 94.6 2.2 7.5E-05 47.9 21.5 136 906-1051 121-260 (375)
65 3hhy_A 1,2-CTD, catechol 1,2-d 94.6 0.035 1.2E-06 60.8 5.9 49 275-323 132-199 (280)
66 1fnf_A Fibronectin; RGD, extra 94.5 7.3 0.00025 43.3 37.0 282 762-1070 51-367 (368)
67 1dmh_A 1,2-CTD, catechol 1,2-d 94.5 0.058 2E-06 60.0 7.6 68 171-238 135-203 (311)
68 3qdh_A Fimbrial structural sub 94.4 0.031 1.1E-06 62.2 5.3 64 94-158 175-277 (290)
69 3th1_A Chlorocatechol 1,2-diox 94.4 0.048 1.6E-06 59.1 6.5 51 897-948 102-166 (260)
70 3t63_A 3,4-PCD, protocatechuat 94.4 0.058 2E-06 56.4 6.9 66 171-238 50-117 (200)
71 1f86_A Transthyretin Thr119Met 94.4 0.026 8.8E-07 53.7 3.8 59 77-142 3-69 (115)
72 3e8v_A Possible transglutamina 94.4 0.092 3.2E-06 46.6 7.0 51 277-328 3-61 (82)
73 2bum_B Protocatechuate 3,4-dio 94.2 0.055 1.9E-06 58.2 6.5 69 897-975 81-168 (241)
74 1tmx_A Hydroxyquinol 1,2-dioxy 94.2 0.054 1.8E-06 59.7 6.5 66 171-239 135-201 (293)
75 3hhy_A 1,2-CTD, catechol 1,2-d 94.2 0.069 2.4E-06 58.4 7.3 66 171-238 133-199 (280)
76 3hrz_A Cobra venom factor; ser 94.2 4.3 0.00015 49.8 24.2 212 100-326 139-393 (627)
77 3t63_M 3,4-PCD, protocatechuat 94.2 0.11 3.7E-06 55.7 8.6 68 171-238 79-150 (238)
78 2h0e_A Transthyretin-like prot 94.1 0.023 7.8E-07 54.5 2.9 60 76-142 10-74 (121)
79 3n9t_A PNPC; phospholipid bind 94.1 0.08 2.7E-06 58.3 7.6 66 171-238 131-197 (290)
80 4fxk_A Complement C4 beta chai 94.1 6.6 0.00023 48.1 25.9 213 100-327 155-432 (656)
81 3kcp_A Cellulosomal-scaffoldin 94.0 0.035 1.2E-06 61.4 4.5 71 152-242 140-220 (321)
82 2b39_A C3; thioester, immune d 94.0 0.27 9.1E-06 67.4 14.0 214 100-328 162-426 (1661)
83 3o5u_A Chlorocatechol 1,2-diox 94.0 0.051 1.7E-06 58.9 5.5 48 275-322 104-171 (257)
84 3pdd_A Glycoside hydrolase, fa 93.9 2.9 0.0001 43.1 18.8 143 275-428 19-178 (190)
85 1oo2_A Transthyretin; retinol- 93.9 0.031 1.1E-06 53.4 3.3 59 77-142 4-70 (119)
86 2h4e_A Transthyretin; amyloid, 93.9 0.037 1.3E-06 53.4 3.8 60 76-142 11-78 (127)
87 3o5u_A Chlorocatechol 1,2-diox 93.7 0.087 3E-06 57.0 6.8 67 171-238 105-172 (257)
88 3hr6_A SPAA, putative surface- 93.5 0.059 2E-06 63.3 5.5 65 94-159 320-419 (436)
89 3prx_B Cobra venom factor; imm 93.5 4.2 0.00015 55.3 24.0 208 100-326 161-415 (1642)
90 3qec_A Putative carbohydrate b 93.3 0.046 1.6E-06 54.3 3.5 28 110-137 86-113 (150)
91 1tdq_A Tenascin-R; extracellul 93.3 9.9 0.00034 40.5 27.2 192 843-1051 65-267 (283)
92 3iwv_A 5-hydroxyisourate hydro 93.2 0.029 9.9E-07 54.8 1.8 61 75-142 26-95 (138)
93 3e8v_A Possible transglutamina 93.2 0.21 7.3E-06 44.2 7.1 50 93-143 11-63 (82)
94 4ank_A Transthyretin; hormone 93.1 0.063 2.2E-06 53.2 4.1 59 77-142 32-98 (147)
95 2bum_A Protocatechuate 3,4-dio 92.9 0.098 3.4E-06 55.1 5.6 67 897-975 55-141 (209)
96 2xi9_A Ancillary protein 1; ce 92.9 0.2 6.7E-06 58.5 8.5 75 807-884 25-104 (457)
97 1xpn_A Hypothetical protein PA 92.8 0.071 2.4E-06 54.0 4.0 27 111-137 107-133 (170)
98 1wlh_A Gelation factor; ABP-12 92.8 6.7 0.00023 43.5 20.8 196 220-428 62-291 (311)
99 1fnf_A Fibronectin; RGD, extra 92.7 15 0.0005 40.7 28.3 136 906-1051 120-258 (368)
100 3pdd_A Glycoside hydrolase, fa 92.6 1.6 5.4E-05 45.2 14.2 101 224-328 52-163 (190)
101 2x9z_A RRGB, cell WALL surface 92.5 0.39 1.3E-05 52.5 9.8 58 176-249 164-228 (262)
102 3uxf_A Fimbrial subunit type 1 92.1 0.07 2.4E-06 63.5 3.6 83 179-263 368-471 (488)
103 1f86_A Transthyretin Thr119Met 92.1 0.32 1.1E-05 46.2 7.2 95 807-902 1-114 (115)
104 1wlh_A Gelation factor; ABP-12 92.1 3.4 0.00012 45.9 17.2 206 99-328 44-279 (311)
105 4acq_A Alpha-2-macroglobulin; 92.0 12 0.00041 50.5 25.1 213 94-325 132-401 (1451)
106 3qva_A Transthyretin-like prot 92.0 0.16 5.6E-06 48.1 5.2 91 807-898 10-113 (116)
107 1qr4_A Protein (tenascin); fib 91.6 12 0.0004 37.2 20.8 133 908-1051 33-166 (186)
108 2g2n_A Transthyretin-like prot 90.8 0.59 2E-05 44.2 7.7 91 807-898 4-111 (114)
109 2gee_A Hypothetical protein; f 90.6 16 0.00055 37.1 21.5 157 872-1051 25-187 (203)
110 2h4e_A Transthyretin; amyloid, 90.6 0.54 1.8E-05 45.4 7.3 98 806-904 9-125 (127)
111 1oo2_A Transthyretin; retinol- 90.5 0.36 1.2E-05 46.1 5.9 97 807-904 2-117 (119)
112 2x9z_A RRGB, cell WALL surface 90.4 0.33 1.1E-05 53.1 6.5 51 95-145 172-228 (262)
113 1qr4_A Protein (tenascin); fib 89.3 16 0.00056 36.1 17.9 47 908-954 121-168 (186)
114 4ank_A Transthyretin; hormone 89.0 0.35 1.2E-05 47.9 4.7 53 277-329 32-98 (147)
115 3r8q_A Fibronectin; heparin, F 88.7 28 0.00094 37.1 23.7 185 763-954 68-276 (290)
116 1tdq_A Tenascin-R; extracellul 88.6 27 0.00093 36.9 23.6 184 764-954 63-269 (283)
117 2h0e_A Transthyretin-like prot 87.8 0.58 2E-05 44.8 5.2 53 172-240 11-70 (121)
118 1ti6_B Pyrogallol hydroxytrans 87.5 1.8 6.1E-05 47.5 9.7 70 174-267 201-270 (274)
119 2xi9_A Ancillary protein 1; ce 87.5 0.46 1.6E-05 55.5 5.2 63 93-159 37-103 (457)
120 1ti6_B Pyrogallol hydroxytrans 86.7 1.3 4.4E-05 48.7 8.1 50 94-145 207-256 (274)
121 3iwv_A 5-hydroxyisourate hydro 85.8 0.49 1.7E-05 46.2 3.5 97 801-898 20-135 (138)
122 2gee_A Hypothetical protein; f 85.4 33 0.0011 34.6 20.2 47 908-954 141-189 (203)
123 1f00_I Intimin; immunoglobulin 84.5 8.6 0.00029 42.2 13.1 53 275-328 21-81 (282)
124 2vkw_A Neural cell adhesion mo 84.1 18 0.00063 36.5 15.1 51 904-954 34-89 (209)
125 4fxt_A Uncharacterized protein 84.0 24 0.00084 36.6 15.6 77 169-262 7-87 (202)
126 3lpw_A A77-A78 domain from tit 83.5 8.4 0.00029 38.2 12.0 50 906-955 131-180 (197)
127 1d2o_A Collagen adhesin, CNA; 82.6 46 0.0016 34.1 18.2 119 94-240 19-161 (187)
128 4acq_A Alpha-2-macroglobulin; 82.4 48 0.0016 44.7 21.7 215 729-953 129-403 (1451)
129 2k7p_A Filamin-A; IG-like, ABP 82.3 30 0.001 35.3 15.7 126 99-243 35-172 (188)
130 3tes_A Tencon; fibronectin typ 82.3 10 0.00036 34.0 10.9 62 908-974 28-91 (98)
131 2k7q_A Filamin-A; IG-like, ABP 82.0 28 0.00095 35.6 15.4 59 95-154 28-89 (191)
132 1qfh_A Protein (gelation facto 81.9 51 0.0017 34.1 19.2 131 384-540 61-209 (212)
133 2vkw_A Neural cell adhesion mo 81.6 8.9 0.00031 38.9 11.5 50 905-954 136-186 (209)
134 3lpw_A A77-A78 domain from tit 81.2 36 0.0012 33.4 15.8 141 904-1051 32-177 (197)
135 3p4l_A Neogenin; iron homeosta 80.4 47 0.0016 33.4 16.6 113 843-955 61-188 (211)
136 1r6v_A Subtilisin-like serine 80.0 9.2 0.00031 47.2 12.5 132 277-408 450-611 (671)
137 1qfh_A Protein (gelation facto 80.0 30 0.001 35.9 15.0 137 99-261 45-194 (212)
138 2jll_A NCAM2, neural cell adhe 79.8 68 0.0023 35.3 19.1 51 905-955 223-274 (389)
139 2kbg_A N-CAM 2, neural cell ad 78.9 4.2 0.00014 38.3 7.2 50 904-953 33-84 (114)
140 2j3s_A Filamin-A; cytoskeleton 78.3 46 0.0016 36.3 16.5 46 98-144 37-84 (288)
141 3hrz_A Cobra venom factor; ser 78.2 1.3E+02 0.0045 36.6 25.1 55 895-953 338-394 (627)
142 2ha1_A Fibronectin; beta sandw 76.9 33 0.0011 34.3 14.0 50 906-955 27-78 (201)
143 2jll_A NCAM2, neural cell adhe 76.6 95 0.0032 34.1 22.5 125 820-955 224-371 (389)
144 1f00_I Intimin; immunoglobulin 76.2 20 0.00068 39.3 12.5 142 77-241 23-169 (282)
145 3hn5_A Putative exported prote 75.6 14 0.00048 38.7 10.5 84 269-354 5-102 (215)
146 2ibg_A CG9211-PA, GH03927P; IH 75.1 6.2 0.00021 40.2 7.9 50 906-955 144-196 (214)
147 1zlg_A Anosmin 1; insulin-like 74.7 1.1E+02 0.0036 37.6 20.3 25 931-955 332-356 (680)
148 2k7p_A Filamin-A; IG-like, ABP 74.6 78 0.0027 32.2 16.7 25 384-408 51-78 (188)
149 3rfz_B Outer membrane usher pr 74.3 11 0.00038 47.8 11.3 104 840-951 692-801 (843)
150 3uaf_A TTR-52; beta barrel/san 73.8 3.6 0.00012 39.1 5.1 43 897-940 7-57 (117)
151 2l4o_A Cell WALL surface ancho 72.4 2 6.9E-05 44.0 3.1 24 116-140 103-128 (181)
152 2cum_A Tenascin-X; hexabrachio 72.4 15 0.00051 33.3 9.0 24 931-954 57-80 (105)
153 3prx_B Cobra venom factor; imm 71.9 82 0.0028 42.9 19.4 55 895-953 360-416 (1642)
154 2ha1_A Fibronectin; beta sandw 70.1 47 0.0016 33.2 13.1 47 908-954 138-186 (201)
155 1wfu_A Unnamed protein product 69.7 11 0.00036 35.8 7.5 52 906-957 47-99 (120)
156 3l5i_A Interleukin-6 receptor 68.8 1.2E+02 0.0041 31.9 20.9 133 908-1051 127-272 (290)
157 2ibg_A CG9211-PA, GH03927P; IH 67.5 42 0.0014 33.7 12.2 22 933-954 70-91 (214)
158 3rfz_B Outer membrane usher pr 67.4 23 0.0008 44.8 12.0 106 217-325 692-801 (843)
159 2rb8_A Tenascin; beta sheet,lo 66.7 40 0.0014 30.2 10.6 26 929-954 52-77 (104)
160 3osv_A Flagellar basal-BODY RO 66.7 24 0.0008 34.3 9.4 45 95-139 34-89 (138)
161 3b83_A Ten-D3; beta sheet, com 66.7 28 0.00097 31.0 9.5 26 929-954 51-76 (100)
162 3f7q_A Integrin beta-4, GP150; 66.6 1.2E+02 0.0041 31.0 15.9 47 908-954 32-79 (234)
163 3pe9_A Fibronectin(III)-like m 66.6 12 0.00041 34.4 6.7 52 275-328 19-71 (98)
164 3cu7_A Complement C5; Mg domai 66.3 1.4E+02 0.0049 40.8 20.3 59 895-954 369-439 (1676)
165 4fxt_A Uncharacterized protein 66.1 33 0.0011 35.6 10.7 53 272-326 5-68 (202)
166 3qht_C Monobody YSMB-1; fibron 66.0 14 0.00049 32.8 7.2 46 909-954 32-79 (97)
167 1r6v_A Subtilisin-like serine 65.7 55 0.0019 40.3 14.5 139 810-952 451-611 (671)
168 2crm_A Fibronectin type-III do 65.1 11 0.00039 34.6 6.6 49 906-954 47-96 (120)
169 3teu_A Fibcon; FN3 domain, fib 64.3 30 0.001 30.4 9.1 47 908-954 28-76 (98)
170 2w1n_A O-GLCNACASE NAGJ; hexos 64.3 27 0.00092 36.7 9.5 31 927-957 193-224 (238)
171 2crz_A Fibronectin type-III do 63.5 11 0.00039 34.1 6.2 51 905-955 37-87 (110)
172 2p9r_A Alpha-2-M, alpha-2-macr 63.5 85 0.0029 28.2 12.1 46 95-140 31-85 (102)
173 3qwq_B Adnectin; cell surface 62.9 31 0.0011 31.9 9.2 47 908-954 30-78 (114)
174 3k2m_C Monobody HA4; engineere 62.2 33 0.0011 30.6 9.0 27 928-954 55-81 (101)
175 1x4x_A Fibronectin type-III do 61.8 19 0.00063 32.5 7.3 52 905-957 34-85 (106)
176 2cuh_A Tenascin-X; fibronectin 61.7 16 0.00055 33.5 6.9 26 929-954 55-80 (115)
177 3l5i_A Interleukin-6 receptor 61.6 22 0.00074 37.9 9.0 48 908-955 228-275 (290)
178 1j8k_A Fibronectin; EDA, TYPEI 61.5 27 0.00094 30.4 8.2 24 931-954 53-76 (94)
179 2b39_A C3; thioester, immune d 61.5 96 0.0033 42.4 17.1 205 732-954 155-426 (1661)
180 1bqu_A Protein (GP130); cytoki 61.0 24 0.00082 35.7 8.8 24 931-954 162-185 (215)
181 2cui_A Tenascin-X; fibronectin 60.5 18 0.00062 33.6 7.0 28 927-954 64-91 (112)
182 2l4o_A Cell WALL surface ancho 59.4 5.8 0.0002 40.6 3.5 26 217-243 102-129 (181)
183 3f7q_A Integrin beta-4, GP150; 59.2 36 0.0012 35.1 10.0 22 933-954 160-181 (234)
184 2db8_A Tripartite motif protei 58.9 9.7 0.00033 34.9 4.8 49 906-955 38-87 (110)
185 3fl7_A Ephrin receptor; ATP-bi 58.5 50 0.0017 39.5 12.1 109 844-955 398-517 (536)
186 2haz_A N-CAM 1, neural cell ad 58.2 15 0.0005 33.2 5.8 52 903-954 31-87 (105)
187 2yuw_A Myosin binding protein 56.7 17 0.00059 32.7 6.1 50 906-955 36-87 (110)
188 2dkm_A Collagen alpha-1(XX) ch 56.7 12 0.00042 33.7 5.1 26 928-954 57-82 (104)
189 3uaf_A TTR-52; beta barrel/san 56.6 16 0.00055 34.6 5.8 49 171-229 6-56 (117)
190 1x5x_A Fibronectin type-III do 56.0 21 0.00073 32.0 6.6 50 905-955 35-86 (109)
191 2dn7_A Receptor-type tyrosine- 55.0 31 0.0011 30.6 7.5 47 908-954 36-83 (107)
192 2dm4_A Sortilin-related recept 54.4 24 0.00082 31.6 6.7 22 933-954 63-84 (108)
193 1bpv_A Titin, A71, connectin; 54.1 24 0.00082 32.5 6.7 54 904-957 37-92 (112)
194 3c12_A FLGD, flagellar protein 53.6 35 0.0012 33.1 8.0 43 96-138 37-90 (138)
195 2ed8_A Netrin receptor DCC; tu 53.4 31 0.0011 30.7 7.2 47 908-955 37-83 (106)
196 1x5z_A Receptor-type tyrosine- 53.4 25 0.00084 31.7 6.6 47 908-954 45-91 (115)
197 1d2o_A Collagen adhesin, CNA; 53.0 1.6E+02 0.0055 30.0 13.2 94 35-145 64-170 (187)
198 1x5f_A Neogenin; RGM binding, 52.9 27 0.00091 31.8 6.8 47 908-954 48-96 (120)
199 4fxk_A Complement C4 beta chai 52.8 3.7E+02 0.013 32.3 20.8 57 897-953 367-432 (656)
200 2dju_A Receptor-type tyrosine- 52.3 64 0.0022 28.3 9.2 50 906-955 33-83 (106)
201 2h41_A Fibronectin; beta sandw 52.2 27 0.00093 31.5 6.5 30 925-954 51-80 (95)
202 4eiu_A Uncharacterized hypothe 51.3 60 0.0021 34.6 9.7 56 270-325 5-76 (249)
203 1x4z_A Biregional cell adhesio 50.9 30 0.001 31.7 6.9 51 905-955 44-98 (121)
204 3t04_D Monobody 7C12; engineer 49.9 34 0.0012 30.7 6.9 27 928-954 59-85 (103)
205 2ed9_A Netrin receptor DCC; tu 48.1 29 0.001 31.7 6.3 48 908-955 60-107 (124)
206 3l48_A Outer membrane usher pr 47.4 28 0.00095 31.6 5.7 48 276-323 9-59 (94)
207 2ocf_D Fibronectin; estrogen r 46.8 43 0.0015 31.3 7.2 26 929-954 78-103 (121)
208 2e3v_A Neural cell adhesion mo 44.8 34 0.0012 31.7 6.2 51 904-954 33-88 (122)
209 1x5l_A Ephrin type-A receptor 44.3 34 0.0012 30.6 5.9 24 931-954 64-87 (111)
210 1uem_A KIAA1568 protein; immun 44.2 45 0.0015 30.1 6.9 49 906-954 43-93 (117)
211 2edb_A Netrin receptor DCC; tu 44.0 45 0.0015 30.5 6.9 25 931-955 69-93 (116)
212 3hn5_A Putative exported prote 43.8 54 0.0019 34.3 7.9 77 805-886 9-97 (215)
213 3p4l_A Neogenin; iron homeosta 43.6 2.5E+02 0.0087 27.7 17.9 25 930-954 61-85 (211)
214 1cfb_A Drosophila neuroglian; 43.4 81 0.0028 31.4 9.3 48 908-955 136-186 (205)
215 1x5g_A Neogenin; RGM binding, 43.3 43 0.0015 30.2 6.5 47 908-955 47-93 (116)
216 1x3d_A Fibronectin type-III do 43.1 23 0.00079 32.3 4.7 25 931-955 71-95 (118)
217 1x5a_A Ephrin type-A receptor 43.0 34 0.0012 31.0 5.8 22 935-956 64-85 (107)
218 1wf5_A Sidekick 2 protein; FNI 42.7 33 0.0011 31.2 5.7 50 906-955 47-98 (121)
219 1x5y_A Myosin binding protein 42.3 31 0.0011 31.1 5.4 51 905-955 36-88 (111)
220 2dle_A Receptor-type tyrosine- 41.7 16 0.00055 33.5 3.2 23 932-954 58-80 (104)
221 2yrz_A Integrin beta-4; GP150, 41.7 45 0.0015 30.2 6.4 24 931-954 71-94 (118)
222 2ee2_A Contactin-1; neural cel 40.5 56 0.0019 29.6 6.9 25 931-955 72-96 (119)
223 3d33_A Domain of unknown funct 40.1 44 0.0015 31.2 5.9 51 94-144 45-101 (108)
224 2djs_A Ephrin type-B receptor 40.0 39 0.0013 30.1 5.6 25 931-955 61-85 (108)
225 2ede_A Netrin receptor DCC; tu 39.8 63 0.0021 28.9 7.1 48 908-955 40-91 (114)
226 1x4y_A Biregional cell adhesio 39.8 20 0.00067 32.7 3.6 22 933-954 69-90 (114)
227 2e7h_A Ephrin type-B receptor 39.6 48 0.0016 29.7 6.2 23 933-955 64-86 (109)
228 3c12_A FLGD, flagellar protein 39.5 1.8E+02 0.006 27.9 10.5 13 397-409 80-92 (138)
229 1zlg_A Anosmin 1; insulin-like 39.4 5E+02 0.017 31.4 17.3 24 931-954 221-244 (680)
230 2ee3_A Collagen alpha-1(XX) ch 39.4 47 0.0016 30.4 6.1 23 932-954 59-81 (108)
231 2yux_A Myosin-binding protein 39.4 53 0.0018 30.1 6.6 51 905-955 45-96 (120)
232 3l48_A Outer membrane usher pr 39.3 24 0.0008 32.1 3.8 52 801-857 2-54 (94)
233 1uc6_A CNTF receptor, ciliary 39.1 35 0.0012 30.9 5.2 23 932-954 66-88 (109)
234 1i1r_A GP130, interleukin-6 re 39.1 91 0.0031 33.3 9.5 24 931-954 258-281 (303)
235 1cfb_A Drosophila neuroglian; 38.5 3E+02 0.01 27.1 15.6 138 905-1051 31-183 (205)
236 2dmk_A Midline 2 isoform 2; mi 37.7 24 0.00081 33.2 3.8 26 932-957 79-104 (127)
237 2ed7_A Netrin receptor DCC; tu 37.7 37 0.0013 30.7 5.2 24 931-954 72-95 (119)
238 2wz8_A Cellulosome protein doc 37.6 63 0.0022 32.0 7.1 79 484-578 46-131 (156)
239 2edy_A Receptor-type tyrosine- 37.6 41 0.0014 29.5 5.3 47 908-955 40-86 (103)
240 1wfo_A Sidekick 2; FN3, cell a 37.1 69 0.0023 29.5 7.1 28 927-954 79-106 (130)
241 1wfn_A Sidekick 2; FN3, cell a 36.9 60 0.002 29.4 6.5 25 930-954 71-95 (119)
242 4a2l_A BT_4663, two-component 36.5 29 0.00099 43.3 5.5 40 482-528 741-782 (795)
243 1oww_A FN, fibronectin first t 36.4 33 0.0011 31.1 4.1 34 924-957 52-85 (98)
244 2c9r_A COPC, copper resistance 36.0 55 0.0019 30.0 5.9 28 125-154 71-101 (102)
245 1x5i_A Neogenin; RGM binding, 35.8 33 0.0011 32.0 4.6 26 930-955 78-103 (126)
246 3n1f_C Cell adhesion molecule- 35.6 45 0.0015 29.9 5.2 24 931-954 63-86 (102)
247 1nqj_A Class 1 collagenase; be 35.5 55 0.0019 31.0 5.8 12 852-863 94-105 (119)
248 3v9f_A Two-component system se 35.4 34 0.0012 42.6 5.8 41 481-528 734-776 (781)
249 1q38_A Fibronectin; amyloid fi 35.3 35 0.0012 30.0 4.0 32 923-954 28-59 (89)
250 1wis_A KIAA1514 protein; FNIII 34.7 45 0.0015 30.8 5.2 51 905-955 44-101 (124)
251 2p9r_A Alpha-2-M, alpha-2-macr 34.4 89 0.0031 28.1 7.1 49 279-327 23-85 (102)
252 3fl7_A Ephrin receptor; ATP-bi 34.3 2.2E+02 0.0075 33.9 12.4 113 931-1051 398-514 (536)
253 3ott_A Two-component system se 34.3 27 0.00093 43.3 4.7 38 484-528 709-748 (758)
254 3klq_A Putative pilus anchorin 34.0 1.2E+02 0.004 29.6 8.0 42 482-527 45-89 (141)
255 1v5j_A KIAA1355 protein, RSGI 33.7 52 0.0018 30.3 5.4 50 905-954 33-84 (108)
256 1uen_A KIAA0343 protein; immun 33.7 45 0.0016 30.4 5.1 25 930-954 77-101 (125)
257 2edd_A Netrin receptor DCC; tu 32.4 29 0.00098 32.5 3.4 23 932-954 77-99 (123)
258 1k85_A Chitinase A1; fibronect 31.3 40 0.0014 29.0 4.0 25 933-957 51-75 (88)
259 3g3l_A Putative uncharacterize 30.6 48 0.0016 34.0 4.7 53 274-331 14-68 (327)
260 2ic2_A CG9211-PA, GH03927P; IH 30.6 31 0.0011 31.9 3.3 24 934-957 72-95 (115)
261 2k7q_A Filamin-A; IG-like, ABP 30.5 4.3E+02 0.015 26.5 13.8 115 760-879 46-185 (191)
262 1va9_A DOWN syndrome cell adhe 30.5 26 0.0009 31.8 2.8 22 933-954 78-99 (122)
263 2xwx_A GBPA, glcnac-binding pr 30.4 2.8E+02 0.0094 31.7 11.6 63 259-326 308-372 (391)
264 3mtr_A N-CAM-1, NCAM-1, neural 30.1 2.6E+02 0.0091 27.6 10.8 54 904-957 139-197 (215)
265 2edx_A Protein tyrosine phosph 29.6 34 0.0012 31.7 3.4 25 930-954 76-100 (134)
266 1x5j_A Neogenin; RGM binding, 28.6 25 0.00086 32.3 2.3 24 932-955 67-90 (113)
267 3sd2_A Putative member of DUF3 28.1 2E+02 0.0067 26.4 7.9 52 94-145 41-95 (101)
268 2dlh_A Receptor-type tyrosine- 28.1 30 0.001 31.4 2.7 24 931-954 74-97 (121)
269 1uey_A KIAA0343 protein; immun 28.0 70 0.0024 29.4 5.3 51 905-955 43-96 (127)
270 2dbj_A Proto-oncogene tyrosine 27.1 48 0.0016 30.6 4.0 26 930-955 76-101 (124)
271 1lyq_A PCOC copper resistance 26.6 77 0.0026 29.2 5.1 28 125-154 73-103 (104)
272 1x5h_A Neogenin; RGM binding, 26.4 34 0.0012 31.7 2.8 24 931-954 75-98 (132)
273 1ujt_A KIAA1568 protein; fibro 26.4 39 0.0013 31.7 3.2 24 931-954 73-96 (120)
274 1wk0_A KIAA0970 protein; fibro 25.5 38 0.0013 32.8 3.0 24 930-953 79-102 (137)
275 4eiu_A Uncharacterized hypothe 25.5 2.5E+02 0.0085 29.9 9.3 57 805-863 8-76 (249)
276 3n06_B PRL-R, prolactin recept 25.3 97 0.0033 31.1 6.3 26 929-954 161-186 (210)
277 2v5y_A Receptor-type tyrosine- 24.8 9.8E+02 0.033 28.8 25.6 221 807-1051 92-335 (731)
278 2w1n_A O-GLCNACASE NAGJ; hexos 24.8 1.1E+02 0.0038 32.2 6.4 42 285-326 176-219 (238)
279 2qbw_A PDZ-fibronectin fusion 24.0 1.1E+02 0.0037 30.8 6.3 29 928-956 152-180 (195)
280 2ekj_A Collagen alpha-1(XX) ch 23.3 15 0.0005 33.3 -0.5 24 931-954 59-82 (105)
281 2dmb_A Filamin-B; beta-sandwic 23.2 1.4E+02 0.0047 28.2 6.4 57 97-155 42-102 (124)
282 2dmb_A Filamin-B; beta-sandwic 23.0 2.2E+02 0.0074 26.8 7.7 22 482-503 64-87 (124)
283 3v9f_A Two-component system se 22.5 75 0.0026 39.3 5.7 26 218-243 733-758 (781)
284 2h41_A Fibronectin; beta sandw 22.4 1.6E+02 0.0055 26.3 6.4 29 476-504 50-79 (95)
285 3klq_A Putative pilus anchorin 22.2 2.7E+02 0.0093 27.1 8.2 61 367-428 24-88 (141)
286 4a2l_A BT_4663, two-component 21.8 80 0.0027 39.2 5.7 42 219-260 740-781 (795)
287 1bqu_A Protein (GP130); cytoki 21.1 4.2E+02 0.014 26.1 10.2 25 931-955 60-85 (215)
288 1cd9_B G-CSF-R, protein (G-CSF 21.1 5.2E+02 0.018 25.4 10.9 21 934-954 69-89 (215)
289 2d7n_A Filamin-C; beta-sandwic 21.0 2.4E+02 0.0084 25.2 7.2 25 384-408 39-66 (93)
290 2ee9_A Filamin-B; beta-sandwic 20.2 2.2E+02 0.0075 25.7 6.7 62 94-156 26-90 (95)
291 2c9r_A COPC, copper resistance 20.0 3.5E+02 0.012 24.5 8.2 15 312-326 71-85 (102)
No 1
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=99.21 E-value=6e-11 Score=129.32 Aligned_cols=161 Identities=16% Similarity=0.167 Sum_probs=105.2
Q ss_pred CCCCCcceEEEEEeCCC----------------------ceEEEEEeCCCceEEEccccCccEEEEEEcCCc-eEEeecc
Q 001120 93 KGGGPSNVNVELLSHSG----------------------DLISSVITSSEGSYLFKNIIPGKYKLRASHPNL-SVEVRGS 149 (1150)
Q Consensus 93 ~g~plaGv~V~L~~~~g----------------------~~i~~ttTd~~G~f~f~~L~pG~Y~l~a~~~g~-~~~~~~~ 149 (1150)
++.||+||.|+|++.++ +.+.+.+||++|.+.|.+|++|.|.|++..+.. .+. ...
T Consensus 28 ~g~~L~Ga~F~l~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~v~Et~aP~G~l~-~~~ 106 (239)
T 2pz4_A 28 EGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEKNRN-VSA 106 (239)
T ss_dssp SCEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEEEETTEECTT-BCC
T ss_pred CCCCcCCcEEEEEEecCcccccccchhhhhchhhhhccCCceeEEEECCCCeEEECCCCCeeEEEEEEECCCCccc-Cce
Confidence 46899999999997543 256788999999999999999999999865322 222 223
Q ss_pred EEEEEcccceeeeeeeeecCcEEEEEE-----EeCC---cceeceEEEEEECCCCcccCC-CCCCCcccccceeeEEEeC
Q 001120 150 TEVELGFENGEVDDIFFAPGYEIRGLV-----VAQG---NPILGVHIYLYSDDVGKVDCP-QGSGNALGERKALCHAVSD 220 (1150)
Q Consensus 150 ~~V~v~~~~~~~~~~l~i~g~~i~G~V-----~~~G---~Pl~Ga~V~L~~~~~~~~~~~-~g~~~~~~~g~~~~~a~TD 220 (1150)
..|++..+ ..+. ...-...|.+ ..+| .+|+||.|.|++.++..+... .|.. ..++......+||
T Consensus 107 ~~v~i~~d-v~v~----~~n~~~~g~~~i~K~d~~~~~~~~L~GA~F~l~~~~g~~~~~~~~g~~--~~~~~~~~~~~Td 179 (239)
T 2pz4_A 107 FLVDLSED-KVIY----PKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVH--SQDIDAAKHLETD 179 (239)
T ss_dssp EEEEESSC-EEEC----CCBCCCEEEEEEEEEEEETTEEEECCSCEEEEEETTCSSCBCEETTEE--CCSTTCBSCEECC
T ss_pred EEEEeCCC-eEEE----EeeeeeeccEEEEEeccCCCCCcccCCCEEEEEeCCCCEEEeecccce--ecccccceEEEEC
Confidence 56666543 2221 1111122322 2334 899999999999754321100 0000 0001112578999
Q ss_pred CCceEEECccCCeeEEEEEEEecCCeEEEecCceEEEEEeccc
Q 001120 221 ADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVRHQH 263 (1150)
Q Consensus 221 a~G~f~f~~LppG~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~ 263 (1150)
++|.+.|.+|++|+|+|++...++++ .+....+.|+|..+.
T Consensus 180 ~~G~~~~~~L~~G~Y~l~EtkAP~GY--~l~~~~~~f~i~~~~ 220 (239)
T 2pz4_A 180 SSGHIRISGLIHGDYVLKEIETQSGY--QIGQAETAVTIEKSK 220 (239)
T ss_dssp TTSEEEEEEEESEEEEEEEEECCTTB--CCCCSEEEEEECTTS
T ss_pred CCCeEEECCCCCceEEEEEEECCCCc--CcCCccEEEEEeCCC
Confidence 99999999999999999998666654 344566788887664
No 2
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=99.15 E-value=1.6e-10 Score=125.95 Aligned_cols=150 Identities=19% Similarity=0.227 Sum_probs=105.2
Q ss_pred CCcccceEEEEeCCCcc-----------------------ccceeecCCceEEEeecCCcceEEeecc-cccccCCCcee
Q 001120 820 GEPIPSVLLSLSGDDGY-----------------------RNNSVSWAGGSFHFDNLFPGNFYLRPLL-KEYAFSPPAQA 875 (1150)
Q Consensus 820 ~~pl~gvllslsg~~~~-----------------------r~n~~t~~~G~~~f~~L~PG~Y~~~~~~-key~~~p~~~~ 875 (1150)
++||+||.|.|...++. -....||++|.+.|.+|++|.|+|++.. ++-.+++....
T Consensus 29 g~~L~Ga~F~l~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~v~Et~aP~G~l~~~~~~ 108 (239)
T 2pz4_A 29 GTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATFNQLPDGIYYGLAVKAGEKNRNVSAFL 108 (239)
T ss_dssp CEECSSCEEEEEEESCCCCTTHHHHHHTSCHHHHHHHEEEEEEEECCTTSEEEEEEEESEEEEEEEEETTEECTTBCCEE
T ss_pred CCCcCCcEEEEEEecCcccccccchhhhhchhhhhccCCceeEEEECCCCeEEECCCCCeeEEEEEEECCCCcccCceEE
Confidence 78999999988753211 1225799999999999999999999873 32277788888
Q ss_pred EEecCCceEEEEEEEEeeeEeE-EEeeEcC--CCCccCCcEEEEEeCCCce-e--------------EEEeeCCCceEEe
Q 001120 876 IELGSGESREVIFQATRVAYSA-TGTITLL--SGQPKDGVSVEARSESKGY-Y--------------EETVTDTSGSYRL 937 (1150)
Q Consensus 876 i~v~~g~~~~v~~~~~r~~~s~-~G~v~~~--~g~p~~gv~v~~~~~~~~~-~--------------~~~~Td~~G~~~i 937 (1150)
|+|... ..+...+.+..+++ .-++..- ++.+|+||.|++.+.++.. . ...+||++|.+.+
T Consensus 109 v~i~~d--v~v~~~n~~~~g~~~i~K~d~~~~~~~~L~GA~F~l~~~~g~~~~~~~~g~~~~~~~~~~~~~Td~~G~~~~ 186 (239)
T 2pz4_A 109 VDLSED--KVIYPKIIWSTGELDLLKVGVDGDTKKPLAGVVFELYEKNGRTPIRVKNGVHSQDIDAAKHLETDSSGHIRI 186 (239)
T ss_dssp EEESSC--EEECCCBCCCEEEEEEEEEEEETTEEEECCSCEEEEEETTCSSCBCEETTEECCSTTCBSCEECCTTSEEEE
T ss_pred EEeCCC--eEEEEeeeeeeccEEEEEeccCCCCCcccCCCEEEEEeCCCCEEEeecccceecccccceEEEECCCCeEEE
Confidence 888764 33333333333332 2333331 2379999999999865432 2 5789999999999
Q ss_pred cCCCCCcEEEEEEEEecCCCCcceeccCCceEEEEecCcc
Q 001120 938 RGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGD 977 (1150)
Q Consensus 938 ~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d 977 (1150)
.+|.+|.||.++++++++| .+ .+..+.++|....
T Consensus 187 ~~L~~G~Y~l~EtkAP~GY---~l---~~~~~~f~i~~~~ 220 (239)
T 2pz4_A 187 SGLIHGDYVLKEIETQSGY---QI---GQAETAVTIEKSK 220 (239)
T ss_dssp EEEESEEEEEEEEECCTTB---CC---CCSEEEEEECTTS
T ss_pred CCCCCceEEEEEEECCCCc---Cc---CCccEEEEEeCCC
Confidence 9999999888999998753 11 2344666665544
No 3
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=98.88 E-value=1.4e-06 Score=100.32 Aligned_cols=63 Identities=11% Similarity=0.206 Sum_probs=51.7
Q ss_pred CCCCCcceEEEEEeCCCceE-EEEEeCCCceEEEccccCccEEEEEEc--CCceEEeeccEEEEEcc
Q 001120 93 KGGGPSNVNVELLSHSGDLI-SSVITSSEGSYLFKNIIPGKYKLRASH--PNLSVEVRGSTEVELGF 156 (1150)
Q Consensus 93 ~g~plaGv~V~L~~~~g~~i-~~ttTd~~G~f~f~~L~pG~Y~l~a~~--~g~~~~~~~~~~V~v~~ 156 (1150)
++.+|+||.|+|++.+|..+ ...+||++|.+.|.+|++|.|.|++.. .||.+. ...+.|.|..
T Consensus 18 ~~~~L~GA~F~l~~~~g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et~aP~GY~~~-~~~~~f~v~~ 83 (355)
T 3kpt_A 18 NEKAMAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVID-PTKREFFVKN 83 (355)
T ss_dssp GGCBCCSCEEEEEETTSCEEEEEEECCTTSEEEEEEEESEEEEEEEEECCTTBCCC-CCCEEEEECS
T ss_pred CCCCcCCcEEEEEECCCCEEEEEEEECCCCeEEECCcCCceEEEEEEeCCCCeEcC-CceEEEEEec
Confidence 46899999999999888665 567899999999999999999999865 488765 3346777654
No 4
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=98.88 E-value=4.3e-08 Score=112.87 Aligned_cols=74 Identities=18% Similarity=0.288 Sum_probs=57.1
Q ss_pred EeeeeeEEEEEEecCCCCCcccceEEEEeCCCcc--ccceeecCCceEEEeecCCcceEEeecc--cccccCCCceeEEe
Q 001120 803 CQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGY--RNNSVSWAGGSFHFDNLFPGNFYLRPLL--KEYAFSPPAQAIEL 878 (1150)
Q Consensus 803 ~~kl~~i~v~v~~~~~~~~pl~gvllslsg~~~~--r~n~~t~~~G~~~f~~L~PG~Y~~~~~~--key~~~p~~~~i~v 878 (1150)
..+.|+|.++++|++ |++|+||.|.|...++- ...+.||++|.+.|.+|.||.|+|++.. ..|.+++....|.|
T Consensus 4 ~~~~g~~~i~K~d~~--~~~L~GA~F~l~~~~g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et~aP~GY~~~~~~~~f~v 81 (355)
T 3kpt_A 4 EIKRGAVDLIKTGVN--EKAMAGAVFSLFKKDGTEVKKELATDANGHIRVQGLEYGEYYFQETKAPKGYVIDPTKREFFV 81 (355)
T ss_dssp --CEEEEEEEEECGG--GCBCCSCEEEEEETTSCEEEEEEECCTTSEEEEEEEESEEEEEEEEECCTTBCCCCCCEEEEE
T ss_pred ceEEEEEEEEEECCC--CCCcCCcEEEEEECCCCEEEEEEEECCCCeEEECCcCCceEEEEEEeCCCCeEcCCceEEEEE
Confidence 456799999999975 89999999999976542 2457899999999999999999999753 35776654443333
No 5
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=98.86 E-value=1.6e-08 Score=119.29 Aligned_cols=148 Identities=13% Similarity=0.170 Sum_probs=106.5
Q ss_pred eeeEEEEEEecCCCCCcc-----cceEEEEeCCC---ccccceeecCCceEEEeec-CCcceEEeecc-cccccCC----
Q 001120 806 LSQISVRIYSKDDAGEPI-----PSVLLSLSGDD---GYRNNSVSWAGGSFHFDNL-FPGNFYLRPLL-KEYAFSP---- 871 (1150)
Q Consensus 806 l~~i~v~v~~~~~~~~pl-----~gvllslsg~~---~~r~n~~t~~~G~~~f~~L-~PG~Y~~~~~~-key~~~p---- 871 (1150)
.|+|.|++++++ |++| ++|.|.|...+ .....+.||++|.+.|.+| +||+|+|++.. ..|.++.
T Consensus 159 ~G~i~i~K~d~~--g~~l~~~~g~~A~F~L~~~~~~~~v~~~~ttd~~G~~~~~~L~~~G~Y~v~Et~a~GY~l~~~~~~ 236 (444)
T 2x9x_A 159 NGDLTLTKTWVD--ATGAPIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEIT 236 (444)
T ss_dssp TSCEEEEEEEEC--TTSCBCCCCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCC
T ss_pred cceEEEEEecCC--CCCcccccCCceEEEEEECCCCcEEEEEEEeCCCceEEEcCCCCCCcEEEEEEecCceEecccccC
Confidence 789999999986 6655 45999998764 1345678999999999999 99999999753 5787763
Q ss_pred CceeEEecCCce---EEEEE-EEEeeeEeE-EEeeEcCCCCccCCcEEEEEeCC--Ccee--------------------
Q 001120 872 PAQAIELGSGES---REVIF-QATRVAYSA-TGTITLLSGQPKDGVSVEARSES--KGYY-------------------- 924 (1150)
Q Consensus 872 ~~~~i~v~~g~~---~~v~~-~~~r~~~s~-~G~v~~~~g~p~~gv~v~~~~~~--~~~~-------------------- 924 (1150)
....|+|+.... ..+.. ......+++ +-++.+ +|.||+||.|++.+.+ +.+.
T Consensus 237 ~~~~vtI~~~~~~~~~~~~~~~~~v~~g~v~~~KvD~-~~~~L~GA~F~l~~~~~~g~~v~~~~~~~~~~~~~~L~~g~y 315 (444)
T 2x9x_A 237 TAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVND-KDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKD 315 (444)
T ss_dssp STTEEEEEEECCCCCCCBCCCCCEEECEEEEEEEECT-TCCBCSCCEEEEESSSSSSCEEEECGGGSCHHHHHHHHHHHH
T ss_pred CcEEEEEeccccccccccccccceEEeeeEEEEEECC-CCCCcCCcEEEEEecCCCCcEEeeecccccccccccccccce
Confidence 455566654322 00000 001123333 445554 5699999999999654 3221
Q ss_pred ------------------------------------------------------EEEeeCCCceEEecCCCCCcEEEEEE
Q 001120 925 ------------------------------------------------------EETVTDTSGSYRLRGLHPDTTYVIKV 950 (1150)
Q Consensus 925 ------------------------------------------------------~~~~Td~~G~~~i~gL~Pg~~y~i~~ 950 (1150)
...+||++|.|+|.||.||.||.+++
T Consensus 316 ~~~EAp~gY~~~t~e~~~~~~~~kid~~~~~l~gA~~~~~~~~~~~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~Et 395 (444)
T 2x9x_A 316 ALDRAVAAYNALTAQQQTQQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEET 395 (444)
T ss_dssp HHHHHHHHHHTSCCC------CHHHHHHHHHHHHHHHHHCSSEEEESCTTCTTBCCEECCTTCEEEEEEECSEEEEEEEE
T ss_pred eeeecccccccccccccccceeeeecccccccccceeecccceeeccccccCceeEEEECCCCeEEECCCCCceEEEEEe
Confidence 35789999999999999999999999
Q ss_pred EEecCC
Q 001120 951 VKKDGF 956 (1150)
Q Consensus 951 ~~~~~~ 956 (1150)
+++++|
T Consensus 396 kAP~GY 401 (444)
T 2x9x_A 396 KQPAGY 401 (444)
T ss_dssp ECCTTS
T ss_pred eCCCCc
Confidence 998854
No 6
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=98.82 E-value=5.9e-08 Score=114.53 Aligned_cols=144 Identities=17% Similarity=0.212 Sum_probs=106.7
Q ss_pred ceecC--CCCceEEEEEeccchhhhhccccceeEEEEeCCCceEEeccC-CCCceEEEEE-eCCCeEEee--e-cccee-
Q 001120 730 GSVSP--PLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPL-YDDITYNVEA-SKPGYYLRQ--V-GPNSF- 801 (1150)
Q Consensus 730 G~v~p--~l~gv~i~i~~~~~~~~~~~~~~~~~~~~~Td~~G~f~~gpL-~~~~~y~v~a-~k~gy~l~~--~-~~~~f- 801 (1150)
|+..+ +++||.|+|.+.+. ++.+..+..||++|++.|..| +++ .|.+.- ..+||.++. . .++.|
T Consensus 171 g~~l~~~~g~~A~F~L~~~~~-------~~~v~~~~ttd~~G~~~~~~L~~~G-~Y~v~Et~a~GY~l~~~~~~~~~~vt 242 (444)
T 2x9x_A 171 ATGAPIPAGAEATFDLVNAQA-------GKVVQTVTLTTDKNTVTVNGLDKNT-EYKFVERSIKGYSADYQEITTAGEIA 242 (444)
T ss_dssp TTSCBCCCCSCEEEEEEETTT-------CCEEEEEEECTTCCEEEECSCCTTS-CEEEEECCBTTBEEEECCCCSTTEEE
T ss_pred CCCcccccCCceEEEEEECCC-------CcEEEEEEEeCCCceEEEcCCCCCC-cEEEEEEecCceEecccccCCcEEEE
Confidence 44443 45569999998753 234556789999999999999 554 454433 349999984 1 11222
Q ss_pred -E---------------EeeeeeEEEEEEecCCCCCcccceEEEEeCCC--c----------------------------
Q 001120 802 -S---------------CQKLSQISVRIYSKDDAGEPIPSVLLSLSGDD--G---------------------------- 835 (1150)
Q Consensus 802 -~---------------~~kl~~i~v~v~~~~~~~~pl~gvllslsg~~--~---------------------------- 835 (1150)
+ ....++|.+.++|++ +.+|+||.|.|...+ +
T Consensus 243 I~~~~~~~~~~~~~~~~~v~~g~v~~~KvD~~--~~~L~GA~F~l~~~~~~g~~v~~~~~~~~~~~~~~L~~g~y~~~EA 320 (444)
T 2x9x_A 243 VKNWKDENPKPLDPTEPKVVTYGKKFVKVNDK--DNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRA 320 (444)
T ss_dssp EEEECCCCCCCBCCCCCEEECEEEEEEEECTT--CCBCSCCEEEEESSSSSSCEEEECGGGSCHHHHHHHHHHHHHHHHH
T ss_pred EeccccccccccccccceEEeeeEEEEEECCC--CCCcCCcEEEEEecCCCCcEEeeecccccccccccccccceeeeec
Confidence 1 123679999999985 699999999998765 2
Q ss_pred -------------------------------------c----------ccceeecCCceEEEeecCCcceEEeecc--cc
Q 001120 836 -------------------------------------Y----------RNNSVSWAGGSFHFDNLFPGNFYLRPLL--KE 866 (1150)
Q Consensus 836 -------------------------------------~----------r~n~~t~~~G~~~f~~L~PG~Y~~~~~~--ke 866 (1150)
| ...+.||++|.+.|.+|.||.|+|++.. ..
T Consensus 321 p~gY~~~t~e~~~~~~~~kid~~~~~l~gA~~~~~~~~~~~~~~~~~~~~~~~td~~G~~~~~~L~~G~Y~l~EtkAP~G 400 (444)
T 2x9x_A 321 VAAYNALTAQQQTQQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAG 400 (444)
T ss_dssp HHHHHTSCCC------CHHHHHHHHHHHHHHHHHCSSEEEESCTTCTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTT
T ss_pred ccccccccccccccceeeeecccccccccceeecccceeeccccccCceeEEEECCCCeEEECCCCCceEEEEEeeCCCC
Confidence 1 1246799999999999999999999873 57
Q ss_pred cccCCCceeEEecCCce
Q 001120 867 YAFSPPAQAIELGSGES 883 (1150)
Q Consensus 867 y~~~p~~~~i~v~~g~~ 883 (1150)
|.+......|+|.+++.
T Consensus 401 Y~l~~~~~~f~i~~~~~ 417 (444)
T 2x9x_A 401 YALLTSRQKFEVTATSY 417 (444)
T ss_dssp SCCCCSCEEEEECTTTT
T ss_pred cccCCCcEEEEEeCCcc
Confidence 99998888999987743
No 7
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=98.74 E-value=3.4e-06 Score=100.95 Aligned_cols=296 Identities=15% Similarity=0.142 Sum_probs=170.3
Q ss_pred eEEEEEEeecCCccccCCCCCCcceEEEEEeCCCceE--EEEEeCCCceEEEc--cccCccEEEEEEcCCceEEeeccEE
Q 001120 76 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLI--SSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVEVRGSTE 151 (1150)
Q Consensus 76 ~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g~~i--~~ttTd~~G~f~f~--~L~pG~Y~l~a~~~g~~~~~~~~~~ 151 (1150)
.+.-+|.++ +|.|++|..|.+...+|..+ .+.+||++|.+++. .-.+|.|.|.++..+-... ..
T Consensus 29 ~ltatV~D~--------~Gnpv~g~~Vtf~~~~g~~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g~s~s----~~ 96 (492)
T 1cwv_A 29 TVEFTVADF--------EGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQRQS----VD 96 (492)
T ss_dssp EEEEEEECT--------TSCBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTEEEE----EE
T ss_pred EEEEEEEcC--------CCCCCCCCEEEEEECCCccccccceeeCCCceEEEEEEcCcceEEEEEEEECCccce----eE
Confidence 466777775 46999999999986666433 46789999999876 3479999999988764321 23
Q ss_pred EEEccccee-------ee-eeeeecC---cEEEEEEEe-CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEe
Q 001120 152 VELGFENGE-------VD-DIFFAPG---YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVS 219 (1150)
Q Consensus 152 V~v~~~~~~-------~~-~~l~i~g---~~i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~T 219 (1150)
+++..+... +. ......| ..+.-+|.+ .|+||+|..|.+....+ .+...++
T Consensus 97 v~f~a~~~~a~~s~l~~~~~~~~A~g~~~~tltatv~Da~GNpv~g~~Vtf~~~~g-----------------~~~~~Tt 159 (492)
T 1cwv_A 97 THFVKGTIAADKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTLG-----------------NMGVITD 159 (492)
T ss_dssp EEEECCCBCGGGCEEEEESSEEETTSSCCEEEEEECBBTTSCBCCSCCEEEEESSS-----------------EECCCEE
T ss_pred EEEeeccCcccceeEEEeccceecCCceeEEEEEEEEcCCCCCcCCcEEEEEECCC-----------------ceeeeEe
Confidence 333322111 11 1122222 345555654 59999999999876521 1234567
Q ss_pred CCCceEEE--CccCCeeEEEEEEEecCCeEEEecCceEEEEEec------cceeee-ccEEEe---ceEEEEEEEeCCCc
Q 001120 220 DADGKFMF--KSVPCGQYELVPHYKGENTVFDVSPSLVSMSVRH------QHVTVP-EKFQVT---GFSVGGRVVDENDM 287 (1150)
Q Consensus 220 Da~G~f~f--~~LppG~Y~v~~~~~~~~~~~~~~P~~~~vtV~~------~~~~l~-~~f~~~---g~sV~G~V~d~~G~ 287 (1150)
|++|.+++ ....+|.|.|.+...+.... ..+..+.|.... ..+.+. ...... ...+.-+|.|.+|.
T Consensus 160 d~~G~at~tlts~~aG~~tVtA~v~g~~~~--~~s~~vtf~a~~~~~~~~~~l~v~~~~~~A~g~~~~tltatv~D~~GN 237 (492)
T 1cwv_A 160 HNDGTYSAPLTSTTLGVATVTVKVDGAAFS--VPSVTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGH 237 (492)
T ss_dssp CSSSEEEEEEECSSCEEEEEEEEETTEEEE--EEEEEEEEECCSSCCTTTCEEEESCSEEETTSCCCEEEEEECBCTTSC
T ss_pred cCCcEEEEEEEccCceEEEEEEEECCcccc--ccceEEEEEccCccccceeeEeecccceeeCCcceEEEEEEEECCCCC
Confidence 89999876 44578999999975443211 011112221110 001110 111111 24678899999999
Q ss_pred cccCeE-EEE--cceee---eEeCCCceEEECc--cCCccEEEEEEecccccccee-eEEEcCCcceeeeEEEeeeEEEE
Q 001120 288 GVEGVK-ILV--DGHER---SITDRDGYYKLDQ--VTSNRYTIEAVKVHYKFNKLK-EYMVLPNMASIADIKAISYDICG 358 (1150)
Q Consensus 288 plaGA~-V~l--~G~~~---~~TD~dG~f~l~~--L~pG~Ytv~~~~~~y~~~~~~-~v~v~p~~~~i~dI~~~~~~V~G 358 (1150)
||+|.. |.+ +|..+ ..||.+|.|+..- -.+|.++|.+...+......+ .+.+.+. ..+..|.. -|
T Consensus 238 pv~g~~~V~f~~~G~~v~~s~~T~~~G~~t~t~t~~~aG~~tVtA~~~g~~~~~~~~~i~f~~~-~~~~~i~v-----ng 311 (492)
T 1cwv_A 238 FISGMQGLSFTQNGVPVSISPITEQPDSYTATVVGNSVGDVTITPQVDTLILSTLQKKISLFPV-PTLTGILV-----NG 311 (492)
T ss_dssp BCCSCCSEEEEEEESCCEECCCEECSSCEEEEEECSSCEEEEEEEEETTEECGGGCEEEEEECC-CCEEEEEE-----TT
T ss_pred CccCCceEEEecCCceeeeeeEecCCceEEEEEEcCcceEEEEEEEECCcccccccceEEEEee-cccceEEe-----cc
Confidence 999987 776 55433 3689999988732 257899999988774433221 2444432 12223322 11
Q ss_pred EEEEcCC------cccEEEEEEc-CC--Ccce-------eeeeeeCCCeEEEEE-EcCeeEEEEEEe
Q 001120 359 VVRTVGS------GNKVKVALTH-GP--DKVK-------PQVKQTDNNGNFCFE-VPPGEYRLSAMA 408 (1150)
Q Consensus 359 ~V~~~~~------~~~a~Vtl~~-g~--~~~~-------~~~~~Td~dG~f~f~-L~pG~Y~l~~~~ 408 (1150)
.-...+. -..+.+++.. +. .+.. ..+..+|++|.-.|. -..+..+|.+..
T Consensus 312 ~~~~~~~gfP~tgf~~A~f~~~~~~~~~~n~~y~wsss~~~~~tvd~~G~vt~~~~~~~~vtITat~ 378 (492)
T 1cwv_A 312 QNFATDKGFPKTIFKNATFQLQMDNDVANNTQYEWSSSFTPNVSVNDQGQVTITYQTYSEVAVTAKS 378 (492)
T ss_dssp EEECTTSCCCSEEETTCEEEEEETTCGGGGGGEEEEESSTTTEEECTTCEEEECSCCSSCEEEEEEE
T ss_pred ccccccCCCCceeEEeEEEEEecCCccccCCceeecccCcceEEECCCceEEEEecCCCEEEEEEEe
Confidence 1111110 1234444431 11 0000 135578999999998 444557777765
No 8
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=98.62 E-value=2.3e-07 Score=109.42 Aligned_cols=144 Identities=13% Similarity=0.122 Sum_probs=103.1
Q ss_pred eeeeeEEEEEEecCCCCC----cccc--eEEEEeCCCcc-cc-----ceeecCCceEEEeecC-CcceEEeecccccccC
Q 001120 804 QKLSQISVRIYSKDDAGE----PIPS--VLLSLSGDDGY-RN-----NSVSWAGGSFHFDNLF-PGNFYLRPLLKEYAFS 870 (1150)
Q Consensus 804 ~kl~~i~v~v~~~~~~~~----pl~g--vllslsg~~~~-r~-----n~~t~~~G~~~f~~L~-PG~Y~~~~~~key~~~ 870 (1150)
.+.|+|.|++.++. +|. +|+| |.|.|...++- .. .+.++.+|.+.|.+|. ||+|+|++....|..+
T Consensus 157 p~~g~i~v~K~~~~-dg~~~~~~L~G~~A~F~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~Y~~~Et~~GY~~~ 235 (452)
T 2xtl_A 157 PVDKKITVNKTWAV-DGNEVNKADETVDAVFTLQVKDGDKWVNVDSAKATAATSFKHTFENLDNAKTYRVIERVSGYAPE 235 (452)
T ss_dssp CBTTBEEEEEEEEE-TTEEECEEEEEEEEEEEEEEEETTEEEEEEEEEEEEESCEEEEECSCCTTSCEEEEEECSSSEEE
T ss_pred CCCCeEEEEEeccc-CCccccccCCCceEEEEEEECCCceEEEeccceeeecccceEEEccCCCCccEEEEEeeCCcccc
Confidence 45688999999872 255 9999 99998865421 11 2336799999999998 9999999988788642
Q ss_pred CCceeEEecCCceEEEEEEEEee---------------eEeE-EEeeEcCCCCccCCcEEEEEeCCCc------------
Q 001120 871 PPAQAIELGSGESREVIFQATRV---------------AYSA-TGTITLLSGQPKDGVSVEARSESKG------------ 922 (1150)
Q Consensus 871 p~~~~i~v~~g~~~~v~~~~~r~---------------~~s~-~G~v~~~~g~p~~gv~v~~~~~~~~------------ 922 (1150)
+.+.+. -.|.+.+... .+++ +=++.+-++++|+||.|++.+ ++.
T Consensus 236 -----~~~~~~--g~iti~n~k~~~~p~p~~p~~~~v~tg~~~~~KvD~~~~~~L~GA~F~l~~-~g~~~~~~t~~~g~~ 307 (452)
T 2xtl_A 236 -----YVSFVN--GVVTIKNNKDSNEPTPINPSEPKVVTYGRKFVKTNKDGKERLAGATFLVKK-DGKYLARKSGVATDA 307 (452)
T ss_dssp -----EEEEET--TEEEEEEEECTTSCCCBCCCCCEEECEEEEEEEECSSSSCBCSCCEEEEEE-TTEEEEEECCSCCHH
T ss_pred -----eecccc--ceEEEeccccccCccccCCCcceEEEccEEEEEECCCCCcccCCCEEEEEE-CCEEEEEeeccccce
Confidence 233222 2233443322 2333 455666666899999999965 221
Q ss_pred ------------------------------------------------------------------eeEEEeeCCCceEE
Q 001120 923 ------------------------------------------------------------------YYEETVTDTSGSYR 936 (1150)
Q Consensus 923 ------------------------------------------------------------------~~~~~~Td~~G~~~ 936 (1150)
.....+||++|.|.
T Consensus 308 ~~~~l~~~~~~~~kAp~gY~~~~~~~~~~~~G~~~~~k~d~~~~~~~~~l~~a~~~f~~~~~~~~~~~~~~ttd~~G~~~ 387 (452)
T 2xtl_A 308 EKAAVDSTKSALDAAVKAYNDLTKEKQEGQDGKSALATVSEKQKAYNDAFVKANYSYEWVEDKNAKNVVKLISNDKGQFE 387 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSCHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCTTCTTBCCEECCTTSEEE
T ss_pred eecccCcchhhhhhcchhhhccccccccccccceEEEEecccccccchhhhccccceEEeccCCCcceeEEEeCCCCeEE
Confidence 23457899999999
Q ss_pred ecCCCCCcEEEEEEEEecCC
Q 001120 937 LRGLHPDTTYVIKVVKKDGF 956 (1150)
Q Consensus 937 i~gL~Pg~~y~i~~~~~~~~ 956 (1150)
|.||.||+||.+++++|.+|
T Consensus 388 ~~~L~~G~Y~l~EtkAP~GY 407 (452)
T 2xtl_A 388 ITGLTEGQYSLEETQAPTGY 407 (452)
T ss_dssp EEEECSEEEEEEEEECCTTB
T ss_pred ECCCCCceEEEEEeeCCCCc
Confidence 99999999999999998853
No 9
>2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A
Probab=98.54 E-value=5.6e-07 Score=110.01 Aligned_cols=148 Identities=13% Similarity=0.164 Sum_probs=103.2
Q ss_pred eeeEEEEEEecCCCCC---cccc--eEEEEeCCCc---cccceeecCCceEEEeec-CCcceEEeecc-cccccCC----
Q 001120 806 LSQISVRIYSKDDAGE---PIPS--VLLSLSGDDG---YRNNSVSWAGGSFHFDNL-FPGNFYLRPLL-KEYAFSP---- 871 (1150)
Q Consensus 806 l~~i~v~v~~~~~~~~---pl~g--vllslsg~~~---~r~n~~t~~~G~~~f~~L-~PG~Y~~~~~~-key~~~p---- 871 (1150)
.|+|.|+++|++ |. +|+| |.|.|...+. ......++.+|.+.|.+| .||+|+|++.. ..|.++-
T Consensus 314 ~G~v~l~K~d~~--g~~~~~L~G~~A~F~l~~~~~~~~~~~~~~~~~~~~~~f~~L~~~g~Y~~~Et~a~GY~l~~~~~~ 391 (605)
T 2y1v_A 314 NGDLTLTKTWVD--ATGAPIPAGAEATFDLVNAQTGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEIT 391 (605)
T ss_dssp TSCEEEEEEEEE--TTSCBCCCCSCEEEEEEETTTCCEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCC
T ss_pred cceEEEEEecCC--CCcccccCCceEEEEEEECCCCeEEEeeeccCCceEEEEecCCCCccEEEEEeecCceeccccccc
Confidence 689999999986 44 9999 9999987642 223345788999999999 99999999753 5687653
Q ss_pred CceeEEecCCceE---EEEE-EEEeeeEeE-EEeeEcCCCCccCCcEEEEEeCC--Ccee--------------------
Q 001120 872 PAQAIELGSGESR---EVIF-QATRVAYSA-TGTITLLSGQPKDGVSVEARSES--KGYY-------------------- 924 (1150)
Q Consensus 872 ~~~~i~v~~g~~~---~v~~-~~~r~~~s~-~G~v~~~~g~p~~gv~v~~~~~~--~~~~-------------------- 924 (1150)
....|+|+..+.. .+.. ...-..+++ +=++.. ++++|+||.|++.+.+ +.+.
T Consensus 392 ~~~~vti~n~~~~~p~~~~~~~~~v~tg~v~~~KvD~-~~~~L~GA~F~l~~~~~~g~~~~~k~~~~t~~~g~~l~~g~y 470 (605)
T 2y1v_A 392 TAGEIAVKNWKDENPKPLDPTEPKVVTYGKKFVKVND-KDNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKD 470 (605)
T ss_dssp STTEEEEEEEECCCCCCBCCCCCEEECEEEEEEEECT-TCCBCCCCEEEEESSSSSSCEEECCGGGSCHHHHHHHHHHHH
T ss_pred cceEEEEeeccccCccccccCcceEEeeeEEEEEECC-CCCCcCCCEEEEEecCCCCcEEEecccccccccccccccccc
Confidence 3344555433220 0000 000112332 444554 4599999999998654 3222
Q ss_pred ------------------------------------------------------EEEeeCCCceEEecCCCCCcEEEEEE
Q 001120 925 ------------------------------------------------------EETVTDTSGSYRLRGLHPDTTYVIKV 950 (1150)
Q Consensus 925 ------------------------------------------------------~~~~Td~~G~~~i~gL~Pg~~y~i~~ 950 (1150)
...+||++|.|.|.||.+|.||.+++
T Consensus 471 ~~~ea~~gY~~~~~~~~~~~~~~kvd~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~t~~~G~~~~~~L~~G~Y~l~Et 550 (605)
T 2y1v_A 471 ALDRAVAAYNALTAQQQTQQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEET 550 (605)
T ss_dssp HHHHHHHHHHTSCTTTCCHHHHHHHHHHHHHHHHHHHHHCSSCEEESCTTSTTBCCEECCTTCEEEEEEECSEEEEEEEE
T ss_pred eeccccccccccccccccceeeeeeccccccccchhhccccceEEecccccccceeEeeCCCCEEEECCCCCceEEEEEe
Confidence 25789999999999999999999999
Q ss_pred EEecCC
Q 001120 951 VKKDGF 956 (1150)
Q Consensus 951 ~~~~~~ 956 (1150)
+++++|
T Consensus 551 kAP~GY 556 (605)
T 2y1v_A 551 KQPAGY 556 (605)
T ss_dssp ECCTTS
T ss_pred eCCCCc
Confidence 999854
No 10
>2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A
Probab=98.42 E-value=3.6e-06 Score=102.92 Aligned_cols=144 Identities=17% Similarity=0.229 Sum_probs=104.8
Q ss_pred ceecCCCCc--eEEEEEeccchhhhhccccceeEEEEeCCCceEEeccCCCCceEEEEE-eCCCeEEeee---cccee--
Q 001120 730 GSVSPPLSG--VNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEA-SKPGYYLRQV---GPNSF-- 801 (1150)
Q Consensus 730 G~v~p~l~g--v~i~i~~~~~~~~~~~~~~~~~~~~~Td~~G~f~~gpL~~~~~y~v~a-~k~gy~l~~~---~~~~f-- 801 (1150)
|.-..+|+| |.|+|.+.++. ..+..++.++.+|++.|..|.+...|.+.- +.+||.++.. .++.|
T Consensus 326 g~~~~~L~G~~A~F~l~~~~~~-------~~~~~~~~~~~~~~~~f~~L~~~g~Y~~~Et~a~GY~l~~~~~~~~~~vti 398 (605)
T 2y1v_A 326 ATGAPIPAGAEATFDLVNAQTG-------KVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSADYQEITTAGEIAV 398 (605)
T ss_dssp TTSCBCCCCSCEEEEEEETTTC-------CEEEEEEECTTCCEEEECSCCTTSCEEEEECCBTTBEEEECCCCSTTEEEE
T ss_pred CCcccccCCceEEEEEEECCCC-------eEEEeeeccCCceEEEEecCCCCccEEEEEeecCceeccccccccceEEEE
Confidence 443457999 99999987542 123355678888899999994333444332 2399999851 12222
Q ss_pred E---------------EeeeeeEEEEEEecCCCCCcccceEEEEeCCC--c-----------------------------
Q 001120 802 S---------------CQKLSQISVRIYSKDDAGEPIPSVLLSLSGDD--G----------------------------- 835 (1150)
Q Consensus 802 ~---------------~~kl~~i~v~v~~~~~~~~pl~gvllslsg~~--~----------------------------- 835 (1150)
. ....++|.+.++|++ +++|+||.|.|...+ +
T Consensus 399 ~n~~~~~p~~~~~~~~~v~tg~v~~~KvD~~--~~~L~GA~F~l~~~~~~g~~~~~k~~~~t~~~g~~l~~g~y~~~ea~ 476 (605)
T 2y1v_A 399 KNWKDENPKPLDPTEPKVVTYGKKFVKVNDK--DNRLAGAEFVIANADNAGQYLARKADKVSQEEKQLVVTTKDALDRAV 476 (605)
T ss_dssp EEEECCCCCCBCCCCCEEECEEEEEEEECTT--CCBCCCCEEEEESSSSSSCEEECCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred eeccccCccccccCcceEEeeeEEEEEECCC--CCCcCCCEEEEEecCCCCcEEEecccccccccccccccccceecccc
Confidence 1 122578999999985 599999999998765 2
Q ss_pred ------------------------------------cc----------cceeecCCceEEEeecCCcceEEeecc--ccc
Q 001120 836 ------------------------------------YR----------NNSVSWAGGSFHFDNLFPGNFYLRPLL--KEY 867 (1150)
Q Consensus 836 ------------------------------------~r----------~n~~t~~~G~~~f~~L~PG~Y~~~~~~--key 867 (1150)
|. ..+.||++|.|.|.+|.+|.|+|++.. ..|
T Consensus 477 ~gY~~~~~~~~~~~~~~kvd~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~t~~~G~~~~~~L~~G~Y~l~EtkAP~GY 556 (605)
T 2y1v_A 477 AAYNALTAQQQTQQEKEKVDKAQAAYNAAVIAANNAFEWVADKDNENVVKLVSDAQGRFEITGLLAGTYYLEETKQPAGY 556 (605)
T ss_dssp HHHHTSCTTTCCHHHHHHHHHHHHHHHHHHHHHCSSCEEESCTTSTTBCCEECCTTCEEEEEEECSEEEEEEEEECCTTS
T ss_pred ccccccccccccceeeeeeccccccccchhhccccceEEecccccccceeEeeCCCCEEEECCCCCceEEEEEeeCCCCc
Confidence 11 236799999999999999999999873 579
Q ss_pred ccCCCceeEEecCCc
Q 001120 868 AFSPPAQAIELGSGE 882 (1150)
Q Consensus 868 ~~~p~~~~i~v~~g~ 882 (1150)
.+......|+|.++.
T Consensus 557 ~l~~~~~~f~i~~~~ 571 (605)
T 2y1v_A 557 ALLTSRQKFEVTATS 571 (605)
T ss_dssp CCCSSCEEEEECTTT
T ss_pred ccCCCcEEEEEcCCc
Confidence 999888999998874
No 11
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=98.38 E-value=2.1e-06 Score=100.82 Aligned_cols=300 Identities=12% Similarity=0.133 Sum_probs=122.7
Q ss_pred CCCCCcceEEEEE----eCCCceEEEEEeCCCceEEEc--cccCccEEEEEEcCCceEEeeccEEEEEccccee------
Q 001120 93 KGGGPSNVNVELL----SHSGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVEVRGSTEVELGFENGE------ 160 (1150)
Q Consensus 93 ~g~plaGv~V~L~----~~~g~~i~~ttTd~~G~f~f~--~L~pG~Y~l~a~~~g~~~~~~~~~~V~v~~~~~~------ 160 (1150)
+|+|++|+.|.+. ..++..+...+++.+|.|.+. .-.+|.|.|.++..+.... ..+..+.+..+...
T Consensus 18 ~Gnpv~g~~V~~~~~~~~~~~~tl~~~~~~~~G~~t~tlTst~aG~~~VtA~~~~~~~~-~~~~~v~f~a~~~~a~~s~l 96 (414)
T 3tkv_A 18 EGNPVTGEASRLRLVPQDTNGVTVGAISEIKPGVYSATVSSTRAGNVVVRAFSEQYQLG-TLQQTLKFVAGPLDAAHSSI 96 (414)
T ss_dssp -------------------------------------------------------------------CCCCCCCGGGCEE
T ss_pred CCCCCCCceeEEEEeecCCCCceEcccEEcCCcEEEEEEEccCcceEEEEEEEcCcccc-ccceEEEEEcCCCccceEEE
Confidence 4799999888773 233444556667789999865 3468999999876654221 00112222221110
Q ss_pred -eeeeeeecCcE--EEEEEEe-CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEE--C-ccCCe
Q 001120 161 -VDDIFFAPGYE--IRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMF--K-SVPCG 233 (1150)
Q Consensus 161 -~~~~l~i~g~~--i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f--~-~LppG 233 (1150)
+.+.-.+.+.. +.-+|.+ .|+||+|..|.+....+.. ..+......+++.+|.|++ . +-.+|
T Consensus 97 ~~~~~~~~A~g~~t~t~~v~Da~gnpv~g~~V~~~~~~g~~-----------~~~~t~~~~t~~~~G~~tatlT~~t~aG 165 (414)
T 3tkv_A 97 TLNPDKPVVGGTVTAIWTAKDANDNPVTGLNPDAPSLSGAA-----------AAGSTASGWTDNGDGTWTAQISLGTTAG 165 (414)
T ss_dssp EEESSSCBTTSEEEEEEECBCTTCCBCCSCCCCCCEEESGG-----------GTTCEECCCEECSSSEEEEEEECCSCCE
T ss_pred EECCCceecCCEEEEEEEEECCCCCCcCCCEEEEEecCCCc-----------ccceeccceEECCCcEEEEEEEeccccc
Confidence 01111111111 2223443 5999999877654321100 0011133456789999865 4 56699
Q ss_pred eEEEEEEEecCCeEEEecCceEEEEEeccc-------eeee-ccEEEe-ceEEEEEEEeCCCccccCeEEEE--cc----
Q 001120 234 QYELVPHYKGENTVFDVSPSLVSMSVRHQH-------VTVP-EKFQVT-GFSVGGRVVDENDMGVEGVKILV--DG---- 298 (1150)
Q Consensus 234 ~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~-------~~l~-~~f~~~-g~sV~G~V~d~~G~plaGA~V~l--~G---- 298 (1150)
.|.|.+...+... ...|. .+++..+. +.+. ..+... ...+.-+|.|.+|.|++|..|.+ ++
T Consensus 166 ~~~Vta~v~g~~~--~~~~~--~vtf~a~~~sa~~s~l~~~~~~~~Ag~~~t~t~~v~Da~GNpv~g~~V~f~~~~~~~~ 241 (414)
T 3tkv_A 166 ELDVMPKLNGQDA--AANAA--KVTVVADALSSNQSKVSVAEDHVKAGESTTVTLVAKDAHGNAISGLSLSASLTGTASE 241 (414)
T ss_dssp EEEEECEETTEEC--SSSCE--EEEEBCCSBCTTTCEEEESCSEEETTCEEEEEEECBBTTCCBCCSCCEEEEEESGGGT
T ss_pred cEEEEEEECCeec--cccce--eEEEEcCCCcceeeEEEEcccceecCCEEEEEEEEEcCCCCCcCCCEEEEEEccCCCC
Confidence 9999997544221 00122 22222111 0000 111111 13566788899999999988877 33
Q ss_pred -eee--eEeCCCceEEEC---ccCCccEEEEEEeccccccc-eeeEEEcCCcceeeeEEE--ee--------eEEEEEEE
Q 001120 299 -HER--SITDRDGYYKLD---QVTSNRYTIEAVKVHYKFNK-LKEYMVLPNMASIADIKA--IS--------YDICGVVR 361 (1150)
Q Consensus 299 -~~~--~~TD~dG~f~l~---~L~pG~Ytv~~~~~~y~~~~-~~~v~v~p~~~~i~dI~~--~~--------~~V~G~V~ 361 (1150)
..+ .+++.+|.|+.. +..+|.|+|.+...+-.... ...+.+.++......+.+ .. ..+.-+|+
T Consensus 242 ~~t~s~~tt~~~G~~~~t~ta~t~aG~~~Vta~v~g~~~~~~~~~vt~~a~~~~~~~s~l~~~~~~~~a~~~~~vt~tv~ 321 (414)
T 3tkv_A 242 GATVSSWTEKGDGSYVATLTTGGKTGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNKTPTVKTTTELTFTMK 321 (414)
T ss_dssp TCEECCCEEEETTEEEEEEECCSCCEEEEEEEEETTEECSSSCEEEEEECCSBCTTTCEEEESCSSCBTTCEEEEEEECB
T ss_pred CceecceEECCCcEEEEEEEcCcccceEEEEEEECCEeccccceEEEEecCCccccceEEEeCCceeecCCeEEEEEEEE
Confidence 122 478899999885 55789999999887643321 124566654322212211 11 13444444
Q ss_pred EcCCc--ccEEEEEE--cCCC-----cceeeeeeeCCCeEEEEEEc----CeeEEEEEEe
Q 001120 362 TVGSG--NKVKVALT--HGPD-----KVKPQVKQTDNNGNFCFEVP----PGEYRLSAMA 408 (1150)
Q Consensus 362 ~~~~~--~~a~Vtl~--~g~~-----~~~~~~~~Td~dG~f~f~L~----pG~Y~l~~~~ 408 (1150)
+..++ .+..|.+. .+.. .......++|.+|.|...|. +|.|+|.+..
T Consensus 322 D~~GNpv~g~~V~f~~~~g~~~~~~~~~t~~~~tt~~~G~~~~tlta~t~aG~~~vta~v 381 (414)
T 3tkv_A 322 DAYGNPVTGLKPDAPVFSGAASTGSERPSAGNWTEKGNGVYVSTLTLGSAAGQLSVMPRV 381 (414)
T ss_dssp BTTSCBCCSCCCCCCEEESGGGCSSSCCEECCCEEEETTEEEEEEECCSCCEEEEEECEE
T ss_pred eCCCCCCCCcEEEEEecccceeeccCCCccceeEECCCCEEEEEEEccceeeEEEEEEEE
Confidence 44443 23334432 1110 00123457888999999844 5888888887
No 12
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=98.37 E-value=4.4e-06 Score=98.50 Aligned_cols=141 Identities=16% Similarity=0.151 Sum_probs=103.0
Q ss_pred CCCCc--eEEEEEeccchhhhhccccceeE---EEEeCCCceEEeccCCCCceEEEEEeCCCeEEeee----ccceeEE-
Q 001120 734 PPLSG--VNIRIIAAEDSQIASLKKGHLAL---ETSTGADGSFIGGPLYDDITYNVEASKPGYYLRQV----GPNSFSC- 803 (1150)
Q Consensus 734 p~l~g--v~i~i~~~~~~~~~~~~~~~~~~---~~~Td~~G~f~~gpL~~~~~y~v~a~k~gy~l~~~----~~~~f~~- 803 (1150)
.+|+| |.|+|...+.. ..+.. ++.++.+|++.|..|.....|.|.-.+.||.++-. +.....+
T Consensus 177 ~~L~G~~A~F~L~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~L~~~g~Y~~~Et~~GY~~~~~~~~~g~iti~n~ 249 (452)
T 2xtl_A 177 KADETVDAVFTLQVKDGD-------KWVNVDSAKATAATSFKHTFENLDNAKTYRVIERVSGYAPEYVSFVNGVVTIKNN 249 (452)
T ss_dssp EEEEEEEEEEEEEEEETT-------EEEEEEEEEEEEESCEEEEECSCCTTSCEEEEEECSSSEEEEEEEETTEEEEEEE
T ss_pred ccCCCceEEEEEEECCCc-------eEEEeccceeeecccceEEEccCCCCccEEEEEeeCCcccceeccccceEEEecc
Confidence 46788 89999876432 11111 34578999999999985567887777899998621 0111111
Q ss_pred ---------------eeeeeEEEEEEecCCCCCcccceEEEEeCCCc---------------------------------
Q 001120 804 ---------------QKLSQISVRIYSKDDAGEPIPSVLLSLSGDDG--------------------------------- 835 (1150)
Q Consensus 804 ---------------~kl~~i~v~v~~~~~~~~pl~gvllslsg~~~--------------------------------- 835 (1150)
...+++.+.++|++ ++++|+||.|.|.. ++
T Consensus 250 k~~~~p~p~~p~~~~v~tg~~~~~KvD~~-~~~~L~GA~F~l~~-~g~~~~~~t~~~g~~~~~~l~~~~~~~~kAp~gY~ 327 (452)
T 2xtl_A 250 KDSNEPTPINPSEPKVVTYGRKFVKTNKD-GKERLAGATFLVKK-DGKYLARKSGVATDAEKAAVDSTKSALDAAVKAYN 327 (452)
T ss_dssp ECTTSCCCBCCCCCEEECEEEEEEEECSS-SSCBCSCCEEEEEE-TTEEEEEECCSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCccccCCCcceEEEccEEEEEECCC-CCcccCCCEEEEEE-CCEEEEEeeccccceeecccCcchhhhhhcchhhh
Confidence 22589999999985 35899999999943 11
Q ss_pred ------------------------------------c----------ccceeecCCceEEEeecCCcceEEeecc--ccc
Q 001120 836 ------------------------------------Y----------RNNSVSWAGGSFHFDNLFPGNFYLRPLL--KEY 867 (1150)
Q Consensus 836 ------------------------------------~----------r~n~~t~~~G~~~f~~L~PG~Y~~~~~~--key 867 (1150)
| ...+.||++|.|.|.+|.||.|+|++.. ..|
T Consensus 328 ~~~~~~~~~~~G~~~~~k~d~~~~~~~~~l~~a~~~f~~~~~~~~~~~~~~ttd~~G~~~~~~L~~G~Y~l~EtkAP~GY 407 (452)
T 2xtl_A 328 DLTKEKQEGQDGKSALATVSEKQKAYNDAFVKANYSYEWVEDKNAKNVVKLISNDKGQFEITGLTEGQYSLEETQAPTGY 407 (452)
T ss_dssp TSCHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEESCTTCTTBCCEECCTTSEEEEEEECSEEEEEEEEECCTTB
T ss_pred ccccccccccccceEEEEecccccccchhhhccccceEEeccCCCcceeEEEeCCCCeEEECCCCCceEEEEEeeCCCCc
Confidence 1 1347799999999999999999999873 589
Q ss_pred ccCCCceeEEecCCce
Q 001120 868 AFSPPAQAIELGSGES 883 (1150)
Q Consensus 868 ~~~p~~~~i~v~~g~~ 883 (1150)
.+...+..|+|.+++.
T Consensus 408 ~l~~~~~~f~i~~~~~ 423 (452)
T 2xtl_A 408 AKLSGDVSFNVNATSY 423 (452)
T ss_dssp CCCSSCEEEEECTTTT
T ss_pred ccCCCCEEEEEeCCcc
Confidence 9998888899987743
No 13
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=98.03 E-value=0.0003 Score=84.15 Aligned_cols=216 Identities=13% Similarity=0.131 Sum_probs=129.8
Q ss_pred cEEEEEEEe-CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEEC--ccCCeeEEEEEEEecCCe
Q 001120 170 YEIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFK--SVPCGQYELVPHYKGENT 246 (1150)
Q Consensus 170 ~~i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~--~LppG~Y~v~~~~~~~~~ 246 (1150)
..+.-+|++ .|+||+|..|.+....+... .....+||++|.+++. +..+|.|.|.+...+...
T Consensus 28 ~~ltatV~D~~Gnpv~g~~Vtf~~~~g~~~--------------~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g~s~ 93 (492)
T 1cwv_A 28 ITVEFTVADFEGKPLAGQEVVITTNNGALP--------------NKITEKTDANGVARIALTNTTDGVTVVTAEVEGQRQ 93 (492)
T ss_dssp EEEEEEEECTTSCBCCSCEEEEECCTTCBS--------------CEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTEEE
T ss_pred EEEEEEEEcCCCCCCCCCEEEEEECCCccc--------------cccceeeCCCceEEEEEEcCcceEEEEEEEECCccc
Confidence 346677875 69999999999875432110 1256899999999865 467999999997544211
Q ss_pred EEEecCceEEEEEeccc-----eee---eccEEEe---ceEEEEEEEeCCCccccCeEEEE---cceee-eEeCCCceEE
Q 001120 247 VFDVSPSLVSMSVRHQH-----VTV---PEKFQVT---GFSVGGRVVDENDMGVEGVKILV---DGHER-SITDRDGYYK 311 (1150)
Q Consensus 247 ~~~~~P~~~~vtV~~~~-----~~l---~~~f~~~---g~sV~G~V~d~~G~plaGA~V~l---~G~~~-~~TD~dG~f~ 311 (1150)
...+++..+. ..+ +..+... ...+.-+|.|.+|.||+|..|.+ .|... .+||++|.++
T Consensus 94 -------s~~v~f~a~~~~a~~s~l~~~~~~~~A~g~~~~tltatv~Da~GNpv~g~~Vtf~~~~g~~~~~Ttd~~G~at 166 (492)
T 1cwv_A 94 -------SVDTHFVKGTIAADKSTLAAVPTSIIADGLMASTITLELKDTYGDPQAGANVAFDTTLGNMGVITDHNDGTYS 166 (492)
T ss_dssp -------EEEEEEECCCBCGGGCEEEEESSEEETTSSCCEEEEEECBBTTSCBCCSCCEEEEESSSEECCCEECSSSEEE
T ss_pred -------eeEEEEeeccCcccceeEEEeccceecCCceeEEEEEEEEcCCCCCcCCcEEEEEECCCceeeeEecCCcEEE
Confidence 1122222110 011 1112222 24677788999999999999988 34333 4678999977
Q ss_pred E--CccCCccEEEEEEecccccc-ceeeEEEcCCc---ceeeeEEEe----------eeEEEEEEEEcCCcc--cEE-EE
Q 001120 312 L--DQVTSNRYTIEAVKVHYKFN-KLKEYMVLPNM---ASIADIKAI----------SYDICGVVRTVGSGN--KVK-VA 372 (1150)
Q Consensus 312 l--~~L~pG~Ytv~~~~~~y~~~-~~~~v~v~p~~---~~i~dI~~~----------~~~V~G~V~~~~~~~--~a~-Vt 372 (1150)
+ ....+|.|+|++...+.... ....+.+.+.. .....+.+. ...+.-+|.+..+.+ +.. |.
T Consensus 167 ~tlts~~aG~~tVtA~v~g~~~~~~s~~vtf~a~~~~~~~~~~l~v~~~~~~A~g~~~~tltatv~D~~GNpv~g~~~V~ 246 (492)
T 1cwv_A 167 APLTSTTLGVATVTVKVDGAAFSVPSVTVNFTADPIPDAGRSSFTVSTPDILADGTMSSTLSFVPVDKNGHFISGMQGLS 246 (492)
T ss_dssp EEEECSSCEEEEEEEEETTEEEEEEEEEEEEECCSSCCTTTCEEEESCSEEETTSCCCEEEEEECBCTTSCBCCSCCSEE
T ss_pred EEEEccCceEEEEEEEECCccccccceEEEEEccCccccceeeEeecccceeeCCcceEEEEEEEECCCCCCccCCceEE
Confidence 7 34478999999988764321 11134444432 112222221 125666666665543 333 55
Q ss_pred EE-cCCCcceeeeeeeCCCeEEEEEE---cCeeEEEEEEe
Q 001120 373 LT-HGPDKVKPQVKQTDNNGNFCFEV---PPGEYRLSAMA 408 (1150)
Q Consensus 373 l~-~g~~~~~~~~~~Td~dG~f~f~L---~pG~Y~l~~~~ 408 (1150)
+. .+. .......||.+|.|...| .+|.++|.+..
T Consensus 247 f~~~G~--~v~~s~~T~~~G~~t~t~t~~~aG~~tVtA~~ 284 (492)
T 1cwv_A 247 FTQNGV--PVSISPITEQPDSYTATVVGNSVGDVTITPQV 284 (492)
T ss_dssp EEEEES--CCEECCCEECSSCEEEEEECSSCEEEEEEEEE
T ss_pred EecCCc--eeeeeeEecCCceEEEEEEcCcceEEEEEEEE
Confidence 54 222 112344688999998873 46888888877
No 14
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=97.91 E-value=1.5e-05 Score=93.28 Aligned_cols=73 Identities=22% Similarity=0.275 Sum_probs=58.1
Q ss_pred eC-ceEEEEEEeec-CCccccCCCCCCcceEEEEEeCCCceEEEEEeCCCceEEEccccCccEEEEEEcC-CceEE
Q 001120 73 TG-FTLLGRVVGAI-GGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHP-NLSVE 145 (1150)
Q Consensus 73 ~g-~~IsG~V~~~~-G~~s~~~~g~plaGv~V~L~~~~g~~i~~ttTd~~G~f~f~~L~pG~Y~l~a~~~-g~~~~ 145 (1150)
.| ..|.|.|..+. +++--.+.+.||+||+|+|++.+|.++.+++||++|.|.|.+|+||.|+|++..| ||.+.
T Consensus 303 ~G~~~igg~Vw~D~n~nG~~D~~e~gl~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~Gy~~t 378 (429)
T 3irp_X 303 AGFGGFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPEGYIPT 378 (429)
T ss_dssp SCEEEEEEEEEECTTSSSSSCCSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCTTEEEC
T ss_pred cceEEEccEEEEeCCCCCCcCcCCCCcCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCCCCEEc
Confidence 35 47889996532 1111112467999999999999999999999999999999999999999998775 88765
No 15
>3tkv_A FDEC fragment B, attaching and effacing protein, pathogenesis FACT; invasin, intimin, adhesion vaccination, bacterial immunoglob domain; 1.90A {Escherichia coli} PDB: 4e9l_A
Probab=97.84 E-value=7e-05 Score=87.87 Aligned_cols=218 Identities=14% Similarity=0.185 Sum_probs=127.4
Q ss_pred CCCCCcceEEEEEeCCCc-----eEEEEEeCCCceEEEc---cccCccEEEEEEcCCceEEeeccEEEEEccccee----
Q 001120 93 KGGGPSNVNVELLSHSGD-----LISSVITSSEGSYLFK---NIIPGKYKLRASHPNLSVEVRGSTEVELGFENGE---- 160 (1150)
Q Consensus 93 ~g~plaGv~V~L~~~~g~-----~i~~ttTd~~G~f~f~---~L~pG~Y~l~a~~~g~~~~~~~~~~V~v~~~~~~---- 160 (1150)
+|+|++|..|......|. .....+++.+|.|.+. +-.+|.|.|.+.-.+-... .....|++..+...
T Consensus 119 ~gnpv~g~~V~~~~~~g~~~~~~t~~~~t~~~~G~~tatlT~~t~aG~~~Vta~v~g~~~~-~~~~~vtf~a~~~sa~~s 197 (414)
T 3tkv_A 119 NDNPVTGLNPDAPSLSGAAAAGSTASGWTDNGDGTWTAQISLGTTAGELDVMPKLNGQDAA-ANAAKVTVVADALSSNQS 197 (414)
T ss_dssp TCCBCCSCCCCCCEEESGGGTTCEECCCEECSSSEEEEEEECCSCCEEEEEECEETTEECS-SSCEEEEEBCCSBCTTTC
T ss_pred CCCCcCCCEEEEEecCCCcccceeccceEECCCcEEEEEEEeccccccEEEEEEECCeecc-ccceeEEEEcCCCcceee
Confidence 579999987766433332 2445567899998765 4458999999987665432 11234444433211
Q ss_pred ---eeeeeeecCcE--EEEEEEe-CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEEC---ccC
Q 001120 161 ---VDDIFFAPGYE--IRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFK---SVP 231 (1150)
Q Consensus 161 ---~~~~l~i~g~~--i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~---~Lp 231 (1150)
+.+.-...|-. +.-+|.+ .|+|++|..|.+...... ..+..+...+++.+|.|+.. +..
T Consensus 198 ~l~~~~~~~~Ag~~~t~t~~v~Da~GNpv~g~~V~f~~~~~~------------~~~~t~s~~tt~~~G~~~~t~ta~t~ 265 (414)
T 3tkv_A 198 KVSVAEDHVKAGESTTVTLVAKDAHGNAISGLSLSASLTGTA------------SEGATVSSWTEKGDGSYVATLTTGGK 265 (414)
T ss_dssp EEEESCSEEETTCEEEEEEECBBTTCCBCCSCCEEEEEESGG------------GTTCEECCCEEEETTEEEEEEECCSC
T ss_pred EEEEcccceecCCEEEEEEEEEcCCCCCcCCCEEEEEEccCC------------CCCceecceEECCCcEEEEEEEcCcc
Confidence 11111122322 3333333 599999988876543210 00112335678899999877 567
Q ss_pred CeeEEEEEEEecCCe-----EEEecCc-----eEEEEEeccceeeeccEEEeceEEEEEEEeCCCccccCeEEEE---cc
Q 001120 232 CGQYELVPHYKGENT-----VFDVSPS-----LVSMSVRHQHVTVPEKFQVTGFSVGGRVVDENDMGVEGVKILV---DG 298 (1150)
Q Consensus 232 pG~Y~v~~~~~~~~~-----~~~~~P~-----~~~vtV~~~~~~l~~~f~~~g~sV~G~V~d~~G~plaGA~V~l---~G 298 (1150)
+|.|.|.+...+... .+.+.|. ...+.+......- . ....+.-+|.|..|.||+|..|.+ +|
T Consensus 266 aG~~~Vta~v~g~~~~~~~~~vt~~a~~~~~~~s~l~~~~~~~~a-~----~~~~vt~tv~D~~GNpv~g~~V~f~~~~g 340 (414)
T 3tkv_A 266 TGELRVMPLFNGQPAATEAAQLTVIAGEMSSANSTLVADNKTPTV-K----TTTELTFTMKDAYGNPVTGLKPDAPVFSG 340 (414)
T ss_dssp CEEEEEEEEETTEECSSSCEEEEEECCSBCTTTCEEEESCSSCBT-T----CEEEEEEECBBTTSCBCCSCCCCCCEEES
T ss_pred cceEEEEEEECCEeccccceEEEEecCCccccceEEEeCCceeec-C----CeEEEEEEEEeCCCCCCCCcEEEEEeccc
Confidence 899999997554321 1111111 1112221111000 0 013466688899999999999876 33
Q ss_pred e----------eeeEeCCCceEEEC---ccCCccEEEEEEecc
Q 001120 299 H----------ERSITDRDGYYKLD---QVTSNRYTIEAVKVH 328 (1150)
Q Consensus 299 ~----------~~~~TD~dG~f~l~---~L~pG~Ytv~~~~~~ 328 (1150)
. ...+||.+|.|... +-.+|.|+|.+...+
T Consensus 341 ~~~~~~~~~t~~~~tt~~~G~~~~tlta~t~aG~~~vta~v~g 383 (414)
T 3tkv_A 341 AASTGSERPSAGNWTEKGNGVYVSTLTLGSAAGQLSVMPRVNG 383 (414)
T ss_dssp GGGCSSSCCEECCCEEEETTEEEEEEECCSCCEEEEEECEETT
T ss_pred ceeeccCCCccceeEECCCCEEEEEEEccceeeEEEEEEEECC
Confidence 1 12489999999773 346799999988765
No 16
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.73 E-value=4.9e-05 Score=89.71 Aligned_cols=77 Identities=19% Similarity=0.268 Sum_probs=59.9
Q ss_pred eEEEEEEEeCCCccccCeEEEEcce--eeeEeCCCceEEECccCCccEEEEEEeccccccceeeEEEcCCcc--eeeeEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILVDGH--ERSITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNMA--SIADIK 350 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l~G~--~~~~TD~dG~f~l~~L~pG~Ytv~~~~~~y~~~~~~~v~v~p~~~--~i~dI~ 350 (1150)
..|+|+|+|.+|+||+||.|.+.|. ..++||++|.|.+ .|+||+|+|++++.+|.....+.+.+..+.. ...++.
T Consensus 337 ~gv~G~V~D~~G~pi~gA~V~v~g~~~~~~~Td~~G~y~~-~l~pG~Y~l~vs~~Gy~~~~~~~v~v~~~~~~~~~~~~~ 415 (435)
T 3mn8_A 337 IGIKGLVTDASGFPIADANVYVAGLEEKPMRTSKRGEYWR-LLTPGLYSVHASAFGYQTSAPQQVRVTNDNQEALRLDFK 415 (435)
T ss_dssp SSEEEEEECSSSCBCTTCEEEETTCTTSCEECCTTCEEEE-CCCSEEEEEEEEBTTBCCCCCEEEEECCCSSSCEECCEE
T ss_pred ceeEEEEECCCCCccCceEEEEecccccceEeCCCCeEEE-ecCCCcEEEEEEEcccccceEEEEEEecCCcceeEEEEE
Confidence 3599999999999999999999773 4579999999988 5999999999999998332233567766542 234565
Q ss_pred Ee
Q 001120 351 AI 352 (1150)
Q Consensus 351 ~~ 352 (1150)
+.
T Consensus 416 L~ 417 (435)
T 3mn8_A 416 LA 417 (435)
T ss_dssp CC
T ss_pred Ee
Confidence 54
No 17
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.71 E-value=8.7e-05 Score=86.19 Aligned_cols=75 Identities=19% Similarity=0.158 Sum_probs=59.2
Q ss_pred eEEEEEEEeC-CCccccCeEEEEccee-eeEeCCCceEEECccCCccEEEEEEeccccccceeeEEEcCCcceeeeEEE
Q 001120 275 FSVGGRVVDE-NDMGVEGVKILVDGHE-RSITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKA 351 (1150)
Q Consensus 275 ~sV~G~V~d~-~G~plaGA~V~l~G~~-~~~TD~dG~f~l~~L~pG~Ytv~~~~~~y~~~~~~~v~v~p~~~~i~dI~~ 351 (1150)
..|+|+|+|+ +|+||+||.|.+.|.. .++||++|.|.+ .|+||+|+|++++.+|..... .+.+..+.....++.+
T Consensus 301 ~~i~G~V~D~~~g~pi~~A~V~v~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~-~v~v~~~~~~~~~~~L 377 (380)
T 1h8l_A 301 RGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWR-LLVQGTYKVTASARGYDPVTK-TVEVDSKGGVQVNFTL 377 (380)
T ss_dssp CEEEEEEEETTTCSBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTBCCEEE-EEEECSSCEEECCEEE
T ss_pred ccceEEEEeCCCCCccCceEEEEecCcceeEECCCEEEEE-ecCCCcEEEEEEEcCccceEE-EEEEcCCCeEEEEEEe
Confidence 5799999997 8999999999996644 479999999999 699999999999999865543 4566555433334443
No 18
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=97.70 E-value=0.0001 Score=71.19 Aligned_cols=76 Identities=14% Similarity=0.236 Sum_probs=58.6
Q ss_pred eeeeeEEEEEEecCCCCCcccceEEEEeCCCccccceeecCCceEEEeecCCcceEEeecc--cccccCCCceeEEecCC
Q 001120 804 QKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLL--KEYAFSPPAQAIELGSG 881 (1150)
Q Consensus 804 ~kl~~i~v~v~~~~~~~~pl~gvllslsg~~~~r~n~~t~~~G~~~f~~L~PG~Y~~~~~~--key~~~p~~~~i~v~~g 881 (1150)
-+.+.|.++++|.+ |++|+||.|.|...++-.-...+ .+|.+.|.+|.||+|+|++.. ..|.+. .+..|+|.+.
T Consensus 25 ~~~~~v~i~K~D~~--g~~L~GA~F~l~~~~g~~v~~~~-sdG~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~i~ftV~~~ 100 (121)
T 2x5p_A 25 DSATHIKFSKRDID--GKELAGATMELRDSSGKTISTWI-SDGQVKDFYLMPGKYTFVETAAPDGYEVA-TAITFTVNEQ 100 (121)
T ss_dssp CCCEEEEEEEECTT--CCBCCCCEEEEECTTSCEEEEEE-CCSSCEEEEECSEEEEEEEEECCTTCCCC-CCEEEEECTT
T ss_pred CCcEEEEEEEECCC--CCCcCCCEEEEEECCCCEEEEEE-eCCEEEEcccCCcEEEEEEEeCCCCcccC-CCEEEEEcCC
Confidence 35678889999874 89999999999987542111122 369999999999999999873 579996 7788999765
Q ss_pred ce
Q 001120 882 ES 883 (1150)
Q Consensus 882 ~~ 883 (1150)
..
T Consensus 101 g~ 102 (121)
T 2x5p_A 101 GQ 102 (121)
T ss_dssp CC
T ss_pred ce
Confidence 43
No 19
>1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1
Probab=97.56 E-value=0.11 Score=59.75 Aligned_cols=295 Identities=15% Similarity=0.230 Sum_probs=152.4
Q ss_pred eEEEEEEeecCCccccCCCCCCcceEEEEEeCCCceEEEE--EeCCCceEEEccccC---c---cEEEEEEc-CCceEEe
Q 001120 76 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSV--ITSSEGSYLFKNIIP---G---KYKLRASH-PNLSVEV 146 (1150)
Q Consensus 76 ~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g~~i~~t--tTd~~G~f~f~~L~p---G---~Y~l~a~~-~g~~~~~ 146 (1150)
.|+|+-.-.+.+. .+|..+.-++|.|+.. |..+.+. ..+.+-.|+|.+||- | .|.|.+.. +||...+
T Consensus 4 ~v~~~K~W~d~~n---~dg~rP~~i~v~L~~~-G~~~~~~~l~~~~~W~~~F~~Lpk~~~G~~i~YtV~E~~~~gY~~~~ 79 (373)
T 1d2p_A 4 SSIGEKVWDDKDN---QDGKRPEKVSVNLLAN-GEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTTDI 79 (373)
T ss_dssp EEEEEEEEESTTT---TTCCCCSEEEEEEEET-TEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCCTTEEEEE
T ss_pred EEEEEEEecCCCc---cCCCCCceEEEEEEeC-CcEeeeEEECCCCCceEEEcCCccCCCCCEEEEEEEecCCCCcEEee
Confidence 4677543321211 1356778899999874 6444332 233456899999987 4 89999854 5786553
Q ss_pred eccEEEEEcccceeeeeeeeecCcEEEEE-EEeC-----CcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeC
Q 001120 147 RGSTEVELGFENGEVDDIFFAPGYEIRGL-VVAQ-----GNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSD 220 (1150)
Q Consensus 147 ~~~~~V~v~~~~~~~~~~l~i~g~~i~G~-V~~~-----G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TD 220 (1150)
.+. .+ .+.......+|.++ +..+ |..-..+.|.|+..... . + .......+
T Consensus 80 ~G~-~I---------tN~~~p~~~~i~VtK~W~D~~n~dg~rP~~I~v~L~~~G~~-~------------g-~~~~l~~~ 135 (373)
T 1d2p_A 80 NGT-TI---------TNKYTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQDGKA-T------------G-KTAILNES 135 (373)
T ss_dssp ETT-EE---------EEEECTTEEEEEEEEEEESTTTTTSCCCSEEEEEEEETTEE-E------------E-EEEEEEGG
T ss_pred cCc-EE---------EeccCCcceEEEEEEEECCCCcccCCCCceEEEEEEECCEE-c------------c-eEEEEecC
Confidence 332 11 11111112234433 4443 32336799999985211 0 0 01223345
Q ss_pred CCceEEECccCCe------eEEEEEEEecCCeEEEecCceEEEEEeccceeeeccEEEeceEEEEEEEe--C---CCccc
Q 001120 221 ADGKFMFKSVPCG------QYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTGFSVGGRVVD--E---NDMGV 289 (1150)
Q Consensus 221 a~G~f~f~~LppG------~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g~sV~G~V~d--~---~G~pl 289 (1150)
.+..|+|.+||.. .|+|.+....+++.-.+.-.. .+...+.....+.-.+|.|.-.. . +|..-
T Consensus 136 n~W~~tf~~Lp~~~~G~~i~YtV~Ev~~~~GY~~~~~~~~------~~~~tITNt~~p~~~~i~v~K~W~d~~~~dg~rP 209 (373)
T 1d2p_A 136 NNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTHVDNND------MGNLITTNKYTPETTSSIGEKVWDDKDNQDGKRP 209 (373)
T ss_dssp GTTEEEEEEEESBSSSSBCCEEEEECSCCTTCEEEEECSC------TTSEEEEEECCCCEEEEEEEEEEESTTTTTSCCC
T ss_pred CceEEEEccCCcccCCCEEEEEEEEeccCCCcEEEEcccc------cccEEEEeccccccccccceEEEcCCCcccccCC
Confidence 6789999999986 799998422233221111100 00111110000112345555442 2 25556
Q ss_pred cCeEEEE--cceeee---EeC-CCceEEECccCC---c---cEEEEEE-eccccccceeeEEEcCCcceeeeE-EEeeeE
Q 001120 290 EGVKILV--DGHERS---ITD-RDGYYKLDQVTS---N---RYTIEAV-KVHYKFNKLKEYMVLPNMASIADI-KAISYD 355 (1150)
Q Consensus 290 aGA~V~l--~G~~~~---~TD-~dG~f~l~~L~p---G---~Ytv~~~-~~~y~~~~~~~v~v~p~~~~i~dI-~~~~~~ 355 (1150)
+.++|.| +|..+. .+. .+-+|+|.+||- | .|+|+.. .++|... +. + -.|.+- .....+
T Consensus 210 ~~I~V~L~~~G~~~~~~~l~~~~~W~~~f~~Lp~y~~G~~i~YtV~E~~v~gY~~~------~~-g-~~ItNt~~p~~~~ 281 (373)
T 1d2p_A 210 EKVSVNLLANGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTTD------IN-G-TTITNKYTPGETS 281 (373)
T ss_dssp SCEEEEEEETTEEEEEEEECGGGTSEEEEEEEESEETTEECCEEEEECCCTTEEEE------EE-T-TEEEEEECTTEEE
T ss_pred ceEEEEEecCCeEeeeEEecCCCCcEEEEecCCccCCCcEEEEEEEEecCCCcEEE------Ec-C-eEEEcccccccce
Confidence 6788888 887652 333 345899999975 4 4888654 3555321 11 1 111111 011235
Q ss_pred EEEEEEEcCC-----cc--cEEEEEEcCCCcce--eeeeeeCCCeEEEEE-EcCe------eEEEEEEeecCCCCCce
Q 001120 356 ICGVVRTVGS-----GN--KVKVALTHGPDKVK--PQVKQTDNNGNFCFE-VPPG------EYRLSAMAATPESSSGI 417 (1150)
Q Consensus 356 V~G~V~~~~~-----~~--~a~Vtl~~g~~~~~--~~~~~Td~dG~f~f~-L~pG------~Y~l~~~~~~~~~~~G~ 417 (1150)
|+++-...+. .. ...|.|.. ++... ......+.+.+|.|. |+.. .|+|.+... ++||
T Consensus 282 v~v~K~W~d~~~~~g~rP~si~V~L~~-dG~~~~~~~~l~~~n~W~~tf~~L~~~~~G~~i~YtV~E~~~----~~GY 354 (373)
T 1d2p_A 282 ATVTKNWDDNNNQDGKRPTEIKVELYQ-DGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTK----VKGY 354 (373)
T ss_dssp EEEEEEEESGGGTTSCCCSEEEEEEEE-TTEEEEEEEEEETTTTTEEEEEEEESEETTEECCEEEEECSC----CTTE
T ss_pred eEEEEEECCCCcccCCCCceEEEEEEe-CCcEeeeEEEecCCCceEEEEcCCCccCCCCEEEEEEEEecC----CCCc
Confidence 5665555432 22 35566642 23221 111223445689999 9874 899999741 3675
No 20
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=97.52 E-value=0.00017 Score=85.36 Aligned_cols=63 Identities=22% Similarity=0.275 Sum_probs=53.9
Q ss_pred eEEEEEEEeCCCccccCeEEEEccee-eeEeCCCceEEECccCCccEEEEEEeccccccceeeEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILVDGHE-RSITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMV 339 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l~G~~-~~~TD~dG~f~l~~L~pG~Ytv~~~~~~y~~~~~~~v~v 339 (1150)
..|+|+|+|.+|+||+||.|.+.|.. .++||.+|.|.+ .|+||+|+|++++.+|..... .+.+
T Consensus 321 ~~i~G~V~D~~g~pi~gA~V~v~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~-~v~v 384 (439)
T 2nsm_A 321 QGIKGMVLDQNYNNLANAVISVSGINHDVTSGDHGDYFR-LLLPGIYTVSATAPGYDPETV-TVTV 384 (439)
T ss_dssp CSEEEEEECTTSCBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTEECEEE-EEEE
T ss_pred cceEEEEEcCCCCCccceEEEEEcccceeEECCCCeEEE-ccCCeeEEEEEEecCceeEEE-EEEE
Confidence 46999999999999999999997654 379999999988 699999999999999865544 4555
No 21
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=97.49 E-value=0.00014 Score=70.24 Aligned_cols=56 Identities=18% Similarity=0.269 Sum_probs=45.6
Q ss_pred EEeeEcCCCCccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecCC
Q 001120 898 TGTITLLSGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGF 956 (1150)
Q Consensus 898 ~G~v~~~~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~ 956 (1150)
.-++.. +|+||+||.|++.+.++....+.+| +|++.+.+|.||+||..+++++++|
T Consensus 32 i~K~D~-~g~~L~GA~F~l~~~~g~~v~~~~s--dG~~~~~~L~~G~Y~l~EtkAP~GY 87 (121)
T 2x5p_A 32 FSKRDI-DGKELAGATMELRDSSGKTISTWIS--DGQVKDFYLMPGKYTFVETAAPDGY 87 (121)
T ss_dssp EEEECT-TCCBCCCCEEEEECTTSCEEEEEEC--CSSCEEEEECSEEEEEEEEECCTTC
T ss_pred EEEECC-CCCCcCCCEEEEEECCCCEEEEEEe--CCEEEEcccCCcEEEEEEEeCCCCc
Confidence 334544 7899999999999877766666665 5999999999999989999998743
No 22
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=97.38 E-value=0.044 Score=73.58 Aligned_cols=208 Identities=16% Similarity=0.162 Sum_probs=114.4
Q ss_pred CCCCcc---eEEEEEeCCCceEEEE--EeCCCceEEEc-----cccCccEEEEEEcCCc-----eEEe----eccEEEEE
Q 001120 94 GGGPSN---VNVELLSHSGDLISSV--ITSSEGSYLFK-----NIIPGKYKLRASHPNL-----SVEV----RGSTEVEL 154 (1150)
Q Consensus 94 g~plaG---v~V~L~~~~g~~i~~t--tTd~~G~f~f~-----~L~pG~Y~l~a~~~g~-----~~~~----~~~~~V~v 154 (1150)
..|+.. ++|+|.+++|..+.+. .++..|.|..+ +...|.|+|++...+- .+.+ .++.+|.+
T Consensus 128 ~~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~~~~~~~~~F~VeeYvlP~feV~i 207 (1325)
T 2pn5_A 128 LKPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQV 207 (1325)
T ss_dssp SSCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEETTEEEEEEEEEECCSCCCCEEEEE
T ss_pred ccccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeCCCcEEEEEEEEEeccCceEEEEE
Confidence 456653 7899999999766543 45788887663 3466999999976431 1221 23344444
Q ss_pred cccceeeeeeeeecCcEEEEEEEe---CCcceec-eEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEEC--
Q 001120 155 GFENGEVDDIFFAPGYEIRGLVVA---QGNPILG-VHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFK-- 228 (1150)
Q Consensus 155 ~~~~~~~~~~l~i~g~~i~G~V~~---~G~Pl~G-a~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~-- 228 (1150)
.... .....+-.+..+|.. .|.|++| +.|.+...+.. .....++|.+|.+.+.
T Consensus 208 ~~~~-----~~~~~~~~~~v~v~a~Y~~G~Pv~G~~~v~v~~~~~~----------------~~~~~~~d~~G~~~~~~~ 266 (1325)
T 2pn5_A 208 MPSV-----IPLEEHQAVNLTIEANYHFGKPVQGVAKVELYLDDDK----------------LKLKKELTVYGKGQVELR 266 (1325)
T ss_dssp EESS-----CCBGGGCEEEEEEEEEESSSCBCEEEEEEEEEETTTT----------------EEEEEEEEEESEEEEEEE
T ss_pred ecCc-----eEEecCCeEEEEEEEEEcCCCeeeeEEEEEEEECCCC----------------cceeEEEecCcEEEEEEe
Confidence 3221 112234445555553 5999999 88887765310 1235667888888763
Q ss_pred --ccC--Ce--eEEEEEEEe--cCCeE------EEecCceEEEEEeccceeeeccEEEec--eEEEEEEEeCCCccccCe
Q 001120 229 --SVP--CG--QYELVPHYK--GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDENDMGVEGV 292 (1150)
Q Consensus 229 --~Lp--pG--~Y~v~~~~~--~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~G~plaGA 292 (1150)
.+. +. .|.+.+... +.+.. +.+.+....+.+.... .+..+| +.+.-.+.+.+|+|+++.
T Consensus 267 ~~~~~~~~~~~~~~v~a~V~e~~tg~~~~~~~~i~i~~~~~~i~~~~~~-----~~~~~g~~~~~~v~~~~~dG~p~~~~ 341 (1325)
T 2pn5_A 267 FDNFAMDADQQDVPVKVSFVEQYTNRTVVKQSQITVYRYAYRVELIKES-----PQFRPGLPFKCALQFTHHDGTPAKGI 341 (1325)
T ss_dssp CSSCCCSSSEEEEEEEEEEEETTTCCEEEEEEEEEEESSSCEEEEEESS-----SSBCTTSCEEEEEEEECTTSCBCTTC
T ss_pred hhHhccccccceEEEEEEEEECCCcEEEEeeEEEEEEEeeEEEEEEeCC-----CcccCCCCEEEEEEEECCCCCcCCCC
Confidence 111 11 344444322 11111 1122333223222110 011123 345556778899999997
Q ss_pred E--EEE---cceeeeEeCCCceEEEC--ccCCccEE-EEEEec
Q 001120 293 K--ILV---DGHERSITDRDGYYKLD--QVTSNRYT-IEAVKV 327 (1150)
Q Consensus 293 ~--V~l---~G~~~~~TD~dG~f~l~--~L~pG~Yt-v~~~~~ 327 (1150)
. |.+ +.....+||++|...|. -...|.|. |++...
T Consensus 342 ~~~v~~~~~~~~~~~~t~~~G~~~~~~~~~~~g~y~~l~v~~~ 384 (1325)
T 2pn5_A 342 SGKVEVSDVRFETTTTSDNDGLIKLELQPSEGTEQLSIHFNAV 384 (1325)
T ss_dssp EEEEEEGGGTEEEEEECCTTSEEEEEECCCTTCCEEEEEEECT
T ss_pred ceeEEEEEecceEEEEeCCCCcEEEEEECCCCCeEEEEEEEEc
Confidence 5 544 22334689999975553 22347886 887653
No 23
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=97.33 E-value=0.0003 Score=82.87 Aligned_cols=66 Identities=20% Similarity=0.237 Sum_probs=54.5
Q ss_pred eEEEEEEEeCCCccccCeEEEEccee-e--eEeCCCceEEECccCCccEEEEEEeccccccceeeEEEcCC
Q 001120 275 FSVGGRVVDENDMGVEGVKILVDGHE-R--SITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPN 342 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l~G~~-~--~~TD~dG~f~l~~L~pG~Ytv~~~~~~y~~~~~~~v~v~p~ 342 (1150)
..|+|+|.|.+|+||+||.|.+.|.. . ++||.+|.|.+ .|+||+|+|++++.+|..... .+.+..+
T Consensus 296 ~~I~G~V~D~~g~pi~gA~V~v~g~~~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~~-~v~v~~~ 364 (426)
T 1uwy_A 296 LGVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYL-LLLPGSYIINVTVPGHDPHIT-KVIIPEK 364 (426)
T ss_dssp CSEEEEEECTTSCBCCSCEEEETTCCCSSCCBCCTTCEEEE-CCCSEEEEEEEECSSSCCEEE-EEEECSS
T ss_pred ceeEEEEECCCCCccCceEEEEEeccccceeEeCCCCEEEe-ccCCeeEEEEEEEcCcccEEE-EEEEeCC
Confidence 46999999999999999999996543 3 69999999999 699999999999999865443 3555544
No 24
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=97.30 E-value=0.027 Score=69.73 Aligned_cols=208 Identities=16% Similarity=0.156 Sum_probs=114.0
Q ss_pred eEEEEEeCCCceEEE--EEeC-CCceEEEc-----cccCccEEEEEEcCC---ce----EEe----eccEEEEEccccee
Q 001120 100 VNVELLSHSGDLISS--VITS-SEGSYLFK-----NIIPGKYKLRASHPN---LS----VEV----RGSTEVELGFENGE 160 (1150)
Q Consensus 100 v~V~L~~~~g~~i~~--ttTd-~~G~f~f~-----~L~pG~Y~l~a~~~g---~~----~~~----~~~~~V~v~~~~~~ 160 (1150)
++|+|.+++|..+.+ ..+| .+|.|.++ +.+.|.|.|++...+ .. +.+ .++.+|.+....
T Consensus 141 v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~-- 218 (645)
T 2hr0_A 141 VMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYENSPQQVFSTEFEVKEYVLPSFEVIVEPTE-- 218 (645)
T ss_dssp EEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEETTCTTSEEEEEEECCCSCCCCCEEEEEESS--
T ss_pred EEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEECCCCCceEEEEEEEeeccCCeEEEEEEcCc--
Confidence 788899999966543 3444 78877663 346699999996532 11 221 233444443221
Q ss_pred eeeeeeecC--cEEEEEEEe---CCcceec-eEEEEEECCCC--cccCCCCCCCcccccceeeEEEeCCCceEEECc---
Q 001120 161 VDDIFFAPG--YEIRGLVVA---QGNPILG-VHIYLYSDDVG--KVDCPQGSGNALGERKALCHAVSDADGKFMFKS--- 229 (1150)
Q Consensus 161 ~~~~l~i~g--~~i~G~V~~---~G~Pl~G-a~V~L~~~~~~--~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~--- 229 (1150)
.....+ -.+..+|.. .|+|++| |.|........ ...| ........+|.+|+|.|.-
T Consensus 219 ---~~~~~~~~~~~~v~v~a~Y~~G~Pv~G~a~v~~~~~~~~~~~~~~----------~~~~~~~~~dg~g~~~l~~~~~ 285 (645)
T 2hr0_A 219 ---KFYYIYNEKGLEVTITARFLYGKKVEGTAFVIFGIQDGEQRISLP----------ESLKRIPIEDGSGEVVLSRKVL 285 (645)
T ss_dssp ---SSEETTCTTCEEEEEEEECTTSCBCCEEEEEEEEEEETTEEEECG----------GGCEEEEEBTTEEEEEECHHHH
T ss_pred ---eeEecCCCcEEEEEEEEEEcCCCeeeeEEEEEEEEeeCCeeeecC----------chheeEEeeCCeEEEEEeHHHh
Confidence 112233 445556653 5999999 66654321100 0000 0012466789999999851
Q ss_pred -----------cCCeeEEEEEEE-e--cCCeE------EEecCceEEEEEeccceeeeccEEEece--EEEEEEEeCCCc
Q 001120 230 -----------VPCGQYELVPHY-K--GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTGF--SVGGRVVDENDM 287 (1150)
Q Consensus 230 -----------LppG~Y~v~~~~-~--~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g~--sV~G~V~d~~G~ 287 (1150)
+.+..+.+.+.- + +.... +.+.+....+.+.... .+-.+|. .+.-.+.+.+|+
T Consensus 286 ~~~~~~~~~~~~~~~~~~v~a~V~e~~g~~~~~~~~~~i~i~~~~~~i~~~~~~-----~~~~~g~~~~~~v~~~~~dG~ 360 (645)
T 2hr0_A 286 LDGVQNLRAEDLVGKSLYVSATVILHSGSDMVQAERSGIPIVTSPYQIHFTKTP-----KYFKPGMPFDLMVFVTNPDGS 360 (645)
T ss_dssp HTSCSSCSGGGGTTCEEEEEEEEEESSSSCEEEEEEEEEEEESCSCEEECSSSC-----SBCCTTSEEEEEEEEECSSSS
T ss_pred hhhhcccccccccCcEEEEEEEEEECCCCeEEEeeeeeEEEEEeeEEEEEEeCc-----cccCCCCcEEEEEEEEcCCCC
Confidence 112246666542 2 22211 1233333333332111 1112333 344456788999
Q ss_pred cccCeEEEE-cc-eeeeEeCCCc--eEEECccCC--ccEEEEEEecc
Q 001120 288 GVEGVKILV-DG-HERSITDRDG--YYKLDQVTS--NRYTIEAVKVH 328 (1150)
Q Consensus 288 plaGA~V~l-~G-~~~~~TD~dG--~f~l~~L~p--G~Ytv~~~~~~ 328 (1150)
|++|..|.+ .| ....+||++| .|.| +++. |.|.|++....
T Consensus 361 p~~~~~v~l~~~~~~~~~t~~~G~~~~~i-~~~~~~g~y~l~v~~~~ 406 (645)
T 2hr0_A 361 PAYRVPVAVQGEDTVQSLTQGDGVAKLSI-NTHPSQKPLSITVRTKK 406 (645)
T ss_dssp BCSCCCEEESSSCCSCCCCCTTSEEEEEE-ECCSCSSCEEEEEEECC
T ss_pred ccCCEEEEEecCcceeeEECCCCcEEEEE-ECCCCCeEEEEEEEEcC
Confidence 999999998 44 3336889999 4555 3444 88999987654
No 25
>1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1
Probab=97.30 E-value=0.06 Score=61.81 Aligned_cols=259 Identities=14% Similarity=0.206 Sum_probs=138.8
Q ss_pred CceEeeCCeee---e---EEEEEEECCCCcccCCceEEEEEcCCCcCCcceeeEEEe--CceEEEEEEeecCCccccCCC
Q 001120 23 DSIHGCGGFVE---G---SFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFRFT--GFTLLGRVVGAIGGESCLDKG 94 (1150)
Q Consensus 23 ~~~~g~ggfv~---G---~Y~L~~~~P~Gw~f~p~~v~v~Vd~~~~s~~~dinf~~~--g~~IsG~V~~~~G~~s~~~~g 94 (1150)
+=-+.|.++-+ | .|.|+..+|+||. ..+++. +|.-... ...|+.+-.-.+++. .+|
T Consensus 46 ~W~~~F~~Lpk~~~G~~i~YtV~E~~~~gY~-------~~~~G~------~ItN~~~p~~~~i~VtK~W~D~~n---~dg 109 (373)
T 1d2p_A 46 NWKYEFKDLPKYDEGKKIEYTVTEDHVKDYT-------TDINGT------TITNKYTPGETSATVTKNWDDNNN---QDG 109 (373)
T ss_dssp TTEEEEEEEESEETTEECCEEEEECCCTTEE-------EEEETT------EEEEEECTTEEEEEEEEEEESTTT---TTS
T ss_pred CceEEEcCCccCCCCCEEEEEEEecCCCCcE-------EeecCc------EEEeccCCcceEEEEEEEECCCCc---ccC
Confidence 44566666666 3 7999779999985 234442 2222221 224555432221211 135
Q ss_pred CCCcceEEEEEeCCCceEEE---EEeCCCceEEEccccCc------cEEEEE--EcCCceEEeeccEEEEEcccceeeee
Q 001120 95 GGPSNVNVELLSHSGDLISS---VITSSEGSYLFKNIIPG------KYKLRA--SHPNLSVEVRGSTEVELGFENGEVDD 163 (1150)
Q Consensus 95 ~plaGv~V~L~~~~g~~i~~---ttTd~~G~f~f~~L~pG------~Y~l~a--~~~g~~~~~~~~~~V~v~~~~~~~~~ 163 (1150)
..+..++|+|+. +|..+.. ...+.+..|+|.+||.. .|+|.+ ..+||.....+.. .+...+.+
T Consensus 110 ~rP~~I~v~L~~-~G~~~g~~~~l~~~n~W~~tf~~Lp~~~~G~~i~YtV~Ev~~~~GY~~~~~~~~-----~~~~tITN 183 (373)
T 1d2p_A 110 KRPTEIKVELYQ-DGKATGKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTHVDNND-----MGNLITTN 183 (373)
T ss_dssp CCCSEEEEEEEE-TTEEEEEEEEEEGGGTTEEEEEEEESBSSSSBCCEEEEECSCCTTCEEEEECSC-----TTSEEEEE
T ss_pred CCCceEEEEEEE-CCEEcceEEEEecCCceEEEEccCCcccCCCEEEEEEEEeccCCCcEEEEcccc-----cccEEEEe
Confidence 567889999987 5643332 33366789999999886 899998 3478876532210 01111211
Q ss_pred eeeecCcEEEEE-EEeC-----CcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccCC---e-
Q 001120 164 IFFAPGYEIRGL-VVAQ-----GNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPC---G- 233 (1150)
Q Consensus 164 ~l~i~g~~i~G~-V~~~-----G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~Lpp---G- 233 (1150)
.....-..|.|. +..+ |...+.++|.|+..... + .......+.+-+|+|.+||. |
T Consensus 184 t~~p~~~~i~v~K~W~d~~~~dg~rP~~I~V~L~~~G~~-~--------------~~~~l~~~~~W~~~f~~Lp~y~~G~ 248 (373)
T 1d2p_A 184 KYTPETTSSIGEKVWDDKDNQDGKRPEKVSVNLLANGEK-V--------------KTLDVTSETNWKYEFKDLPKYDEGK 248 (373)
T ss_dssp ECCCCEEEEEEEEEEESTTTTTSCCCSCEEEEEEETTEE-E--------------EEEEECGGGTSEEEEEEEESEETTE
T ss_pred ccccccccccceEEEcCCCcccccCCceEEEEEecCCeE-e--------------eeEEecCCCCcEEEEecCCccCCCc
Confidence 111111245554 4442 44557899999986311 0 01122233456999999985 4
Q ss_pred --eEEEEEEEecCCeEEEecCceEEEEEeccceeeeccEEEeceEEEEEEEe--C---CCccccCeEEEE--cceeee--
Q 001120 234 --QYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTGFSVGGRVVD--E---NDMGVEGVKILV--DGHERS-- 302 (1150)
Q Consensus 234 --~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g~sV~G~V~d--~---~G~plaGA~V~l--~G~~~~-- 302 (1150)
.|+|.+... +++ ..++.+-. +.....+...+|.+.-.. . +|..-+.++|.| +|+...
T Consensus 249 ~i~YtV~E~~v-~gY---------~~~~~g~~--ItNt~~p~~~~v~v~K~W~d~~~~~g~rP~si~V~L~~dG~~~~~~ 316 (373)
T 1d2p_A 249 KIEYTVTEDHV-KDY---------TTDINGTT--ITNKYTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQDGKATGKT 316 (373)
T ss_dssp ECCEEEEECCC-TTE---------EEEEETTE--EEEEECTTEEEEEEEEEEESGGGTTSCCCSEEEEEEEETTEEEEEE
T ss_pred EEEEEEEEecC-CCc---------EEEEcCeE--EEcccccccceeEEEEEECCCCcccCCCCceEEEEEEeCCcEeeeE
Confidence 488887422 122 12222211 111111112334443332 2 233335678877 887652
Q ss_pred --Ee-CCCceEEECccCC---c---cEEEEEE--ecccc
Q 001120 303 --IT-DRDGYYKLDQVTS---N---RYTIEAV--KVHYK 330 (1150)
Q Consensus 303 --~T-D~dG~f~l~~L~p---G---~Ytv~~~--~~~y~ 330 (1150)
.+ +.+..|+|.+|+. | .|+|+.. .++|.
T Consensus 317 ~~l~~~n~W~~tf~~L~~~~~G~~i~YtV~E~~~~~GY~ 355 (373)
T 1d2p_A 317 AILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYT 355 (373)
T ss_dssp EEEETTTTTEEEEEEEESEETTEECCEEEEECSCCTTEE
T ss_pred EEecCCCceEEEEcCCCccCCCCEEEEEEEEecCCCCcE
Confidence 23 3445899999986 4 7999875 35664
No 26
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=97.28 E-value=0.0004 Score=88.45 Aligned_cols=82 Identities=15% Similarity=0.250 Sum_probs=67.1
Q ss_pred EeeeeeEEEEEEecCCCCCcccceEEEEeCCCc-c-ccceeecCCceEEEeecCCcceEEeecc--cccccCCCceeEEe
Q 001120 803 CQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDG-Y-RNNSVSWAGGSFHFDNLFPGNFYLRPLL--KEYAFSPPAQAIEL 878 (1150)
Q Consensus 803 ~~kl~~i~v~v~~~~~~~~pl~gvllslsg~~~-~-r~n~~t~~~G~~~f~~L~PG~Y~~~~~~--key~~~p~~~~i~v 878 (1150)
....|.|.|+++|++ |+||+||.|.|...++ . -...+||++|.+.|.+|.||+|+|++.. ..|.++.....|+|
T Consensus 44 ~~~~G~~~i~K~d~~--~~~L~GA~F~l~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~~~~~~v~v 121 (893)
T 2ww8_A 44 SPAIGKVVIKETGEG--GALLGDAVFELKNNTDGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEV 121 (893)
T ss_dssp --CCEEEEEEEECST--TCBCCCCEEEEEETTTCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCCCCEEEEEE
T ss_pred CcceEEEEEEEECCC--CCccCCCEEEEEECCCCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecCCccEEEEE
Confidence 445788899999964 8999999999987753 2 2346799999999999999999999874 57999999999999
Q ss_pred cCCceEEE
Q 001120 879 GSGESREV 886 (1150)
Q Consensus 879 ~~g~~~~v 886 (1150)
.+.....+
T Consensus 122 ~~~g~~~v 129 (893)
T 2ww8_A 122 EKNGRTTV 129 (893)
T ss_dssp CTTCCEEE
T ss_pred CCCceEEE
Confidence 87765544
No 27
>3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii}
Probab=97.05 E-value=0.0008 Score=74.93 Aligned_cols=84 Identities=10% Similarity=0.168 Sum_probs=58.2
Q ss_pred eeeeeEEEEEEecCC---CCCcccceEEEEeCCCc-c-----------------ccceeecCCceEEEeec---------
Q 001120 804 QKLSQISVRIYSKDD---AGEPIPSVLLSLSGDDG-Y-----------------RNNSVSWAGGSFHFDNL--------- 853 (1150)
Q Consensus 804 ~kl~~i~v~v~~~~~---~~~pl~gvllslsg~~~-~-----------------r~n~~t~~~G~~~f~~L--------- 853 (1150)
...|+|.|+++|+++ .+++|+||.|.|...++ | ...+.||++|.+.|.+|
T Consensus 156 ~~~g~i~i~KvD~~~~~~~~~~L~GA~F~L~~~~~~~~~~~~~~~~g~~i~~~~~~~~tTd~~G~~~~~gL~~~d~~~~~ 235 (290)
T 3qdh_A 156 SRWGDLLIKKVDNHQQGQDKAGLQGAQFQLYKAKNAYAGTCTKDKEGDPIAINGETTLTTDAQGAINVKGLFISDSIDGA 235 (290)
T ss_dssp EEEEEEEEEEC----------CCTTCEEEEEEESSTTCSSCCSCEESSCCCBTTBSSEECCTTSEEEEEEEEEEESCCCT
T ss_pred EEEeeEEEEEECCCCCcccCcccCCCEEEEEECCCcccceeeccccCceEecCCceEEEECCCCEEEEeCcccccccccc
Confidence 457899999999863 25899999999986533 1 12478999999999999
Q ss_pred --------CCcceEEeecc--cccccCCC---ceeEEecCCceEEEE
Q 001120 854 --------FPGNFYLRPLL--KEYAFSPP---AQAIELGSGESREVI 887 (1150)
Q Consensus 854 --------~PG~Y~~~~~~--key~~~p~---~~~i~v~~g~~~~v~ 887 (1150)
.+|+|+|++.. ..|.+... ...|+|+.|++..+.
T Consensus 236 ~~~~~~~~~~~~Y~l~EtkAP~GY~l~~~~~~~~~~~v~~~~~~~~~ 282 (290)
T 3qdh_A 236 NRDNQKDATARCYVLVETKAPAGYVLPAGDGAVTPVKIEVGAVTTDN 282 (290)
T ss_dssp TSSCCTTCSEEEEEEEEEECCTTBCCCCGGGGEEEEEEEC------C
T ss_pred cccccccCCCceEEEEEccCCCCeEcCcCcCCceeEEEECCCCccEE
Confidence 68999999873 57999987 677888888765433
No 28
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=96.91 E-value=0.0013 Score=76.18 Aligned_cols=84 Identities=18% Similarity=0.271 Sum_probs=69.5
Q ss_pred eEEeeeeeEEEEEEecCCCCCcccceEEEEeCCCccccceeecCCceEEEeecCCcceEEeecccccccCCCceeEEecC
Q 001120 801 FSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSPPAQAIELGS 880 (1150)
Q Consensus 801 f~~~kl~~i~v~v~~~~~~~~pl~gvllslsg~~~~r~n~~t~~~G~~~f~~L~PG~Y~~~~~~key~~~p~~~~i~v~~ 880 (1150)
|-.+-.+.|..+|.|. .+|+||+||.+.|.|.. ...+||.+|.|.+ .|.||+|.|+.....|. +..+.|.|.+
T Consensus 295 ~~~~v~~~i~G~V~D~-~~g~pi~~A~V~v~~~~---~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--~~~~~v~v~~ 367 (380)
T 1h8l_A 295 FIKQVHRGIWGFVLDA-TDGRGILNATISVADIN---HPVTTYKDGDYWR-LLVQGTYKVTASARGYD--PVTKTVEVDS 367 (380)
T ss_dssp HHHGGGCEEEEEEEET-TTCSBCTTCEEEETTEE---EEEECCTTSEEEE-CCCSEEEEEEEECTTBC--CEEEEEEECS
T ss_pred hhhhccccceEEEEeC-CCCCccCceEEEEecCc---ceeEECCCEEEEE-ecCCCcEEEEEEEcCcc--ceEEEEEEcC
Confidence 4344568899999996 34999999999999863 4578999999988 69999999999999997 5567899999
Q ss_pred CceEEEEEEEE
Q 001120 881 GESREVIFQAT 891 (1150)
Q Consensus 881 g~~~~v~~~~~ 891 (1150)
+++..++|...
T Consensus 368 ~~~~~~~~~L~ 378 (380)
T 1h8l_A 368 KGGVQVNFTLS 378 (380)
T ss_dssp SCEEECCEEEC
T ss_pred CCeEEEEEEec
Confidence 99887777654
No 29
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=96.91 E-value=0.0017 Score=76.82 Aligned_cols=64 Identities=20% Similarity=0.344 Sum_probs=51.9
Q ss_pred ceEEEEEEeecCCccccCCCCCCcceEEEEEeCCCceEEEEEeCCCceEEEccccCccEEEEEEcCCceEEeeccEEEEE
Q 001120 75 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVEL 154 (1150)
Q Consensus 75 ~~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g~~i~~ttTd~~G~f~f~~L~pG~Y~l~a~~~g~~~~~~~~~~V~v 154 (1150)
..|+|+|.+. +|+|++||+|.+.+. -..++||.+|.|.+ .|+||+|+|.+++.||.... ..|.+
T Consensus 321 ~~i~G~V~D~--------~g~pi~gA~V~v~~~----~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~~~~---~~v~v 384 (439)
T 2nsm_A 321 QGIKGMVLDQ--------NYNNLANAVISVSGI----NHDVTSGDHGDYFR-LLLPGIYTVSATAPGYDPET---VTVTV 384 (439)
T ss_dssp CSEEEEEECT--------TSCBCTTCEEEETTE----EEEEECCTTSEEEE-CCCSEEEEEEEECTTEECEE---EEEEE
T ss_pred cceEEEEEcC--------CCCCccceEEEEEcc----cceeEECCCCeEEE-ccCCeeEEEEEEecCceeEE---EEEEE
Confidence 4699999875 469999999998532 24688999999987 59999999999999997652 35665
No 30
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=96.88 E-value=0.0013 Score=76.83 Aligned_cols=55 Identities=18% Similarity=0.280 Sum_probs=46.7
Q ss_pred cEEEEEEEeC----------CcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccCCeeEEEEE
Q 001120 170 YEIRGLVVAQ----------GNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVP 239 (1150)
Q Consensus 170 ~~i~G~V~~~----------G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~LppG~Y~v~~ 239 (1150)
+.+.|.|+.+ +.||+||.|.|++.+ |..+.+++||++|.|.|.+|+||.|+|.+
T Consensus 306 ~~igg~Vw~D~n~nG~~D~~e~gl~gv~v~L~d~~----------------G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~ 369 (429)
T 3irp_X 306 GGFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPT----------------GIRLATTTTDITGHYNFDNLTNGNYLVEF 369 (429)
T ss_dssp EEEEEEEEECTTSSSSSCCSSCBCTTCEEEEECTT----------------SCEEEEEECCTTSEEEEEEEESEEEEEEE
T ss_pred EEEccEEEEeCCCCCCcCcCCCCcCCeEEEEEcCC----------------CCEEEEEEeCCCCeEEeCCCCCCcEEEEE
Confidence 4788999842 469999999999763 34578999999999999999999999987
Q ss_pred E
Q 001120 240 H 240 (1150)
Q Consensus 240 ~ 240 (1150)
.
T Consensus 370 ~ 370 (429)
T 3irp_X 370 V 370 (429)
T ss_dssp C
T ss_pred E
Confidence 4
No 31
>3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X*
Probab=96.86 E-value=0.0025 Score=74.93 Aligned_cols=79 Identities=16% Similarity=0.196 Sum_probs=65.8
Q ss_pred eeeeEEEEEEecCCCCCcccceEEEEeCCCc-c-------------ccceeecCCceEEEeec-----------------
Q 001120 805 KLSQISVRIYSKDDAGEPIPSVLLSLSGDDG-Y-------------RNNSVSWAGGSFHFDNL----------------- 853 (1150)
Q Consensus 805 kl~~i~v~v~~~~~~~~pl~gvllslsg~~~-~-------------r~n~~t~~~G~~~f~~L----------------- 853 (1150)
..|+|.|+++|+++.+.+|+||.|.|...++ + ...++||++|.+.|.+|
T Consensus 305 ~tG~i~i~Kvd~~d~~~~L~GA~F~L~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~gL~~~~~~~~~~~~~~~~~ 384 (436)
T 3hr6_A 305 KFGQITIEKSFDGNTPGADRTATFQLHRCEADGSLVKSDPPISLDGKQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDA 384 (436)
T ss_dssp EEEEEEEEEEETTBCCCTTCCCEEEEEEECTTSCBCTTCCCCCBTTBCCEECCTTSEEEEEEEEEEEEEEETTEEEEEET
T ss_pred EEeeEEEEEeCCCCCCcccCCCEEEEEECCCCccccccCCceeeccceEEEeCCCcEEEEeCcccccccccccccccccc
Confidence 5788999999986568999999999975432 1 13468999999999999
Q ss_pred ---CCcceEEeecc--cccccCCCceeEEecCCce
Q 001120 854 ---FPGNFYLRPLL--KEYAFSPPAQAIELGSGES 883 (1150)
Q Consensus 854 ---~PG~Y~~~~~~--key~~~p~~~~i~v~~g~~ 883 (1150)
.+|+|+|++.. ..|.+.+.+..|+|.+++.
T Consensus 385 ~~~~~g~Y~lvETkAP~GY~l~~~pi~fti~~~~~ 419 (436)
T 3hr6_A 385 WAGKGTEFCLVETATASGYELLPKPVIVKLEANES 419 (436)
T ss_dssp TTTSCSEEEEEEEECCTTCBCCSSCEEECCCCCTT
T ss_pred ccCCCCeEEEEEecCCCCcCcCCCcEEEEEecCCc
Confidence 57999999874 5799999999999998866
No 32
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=96.62 E-value=0.00097 Score=66.35 Aligned_cols=55 Identities=16% Similarity=0.403 Sum_probs=43.6
Q ss_pred ccccceeecCCceEEEeecCCcceEEeecc-----cccccCCCc----eeEEecCCceEEEEEE
Q 001120 835 GYRNNSVSWAGGSFHFDNLFPGNFYLRPLL-----KEYAFSPPA----QAIELGSGESREVIFQ 889 (1150)
Q Consensus 835 ~~r~n~~t~~~G~~~f~~L~PG~Y~~~~~~-----key~~~p~~----~~i~v~~g~~~~v~~~ 889 (1150)
.|+.-.++|++|.|.|.+|+||+|||...+ .+|...|.. +.|+|+.||+.+|.++
T Consensus 86 ~y~r~t~cD~~G~F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~lmk~V~v~ggq~~~v~l~ 149 (150)
T 3qec_A 86 TYVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLT 149 (150)
T ss_dssp GGCEEEECCTTSEEEEEEECSEEEEEEEEEEEEEESSSSEEEEEEEEEEEEEESSSCCCCEEEC
T ss_pred cceeEEEeCCCCcEEECCCCCccEEEEEEEEeccCCCCCcccccceEEEEEEEcCCcEEEEEec
Confidence 466677999999999999999999987643 356554433 4589999999998874
No 33
>3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A
Probab=96.60 E-value=0.005 Score=69.41 Aligned_cols=77 Identities=13% Similarity=0.188 Sum_probs=62.9
Q ss_pred eeeEEEEEEecCCCCCcccceEEEEeCCCc--cc------------------------cceeecCCceEEEeecC-----
Q 001120 806 LSQISVRIYSKDDAGEPIPSVLLSLSGDDG--YR------------------------NNSVSWAGGSFHFDNLF----- 854 (1150)
Q Consensus 806 l~~i~v~v~~~~~~~~pl~gvllslsg~~~--~r------------------------~n~~t~~~G~~~f~~L~----- 854 (1150)
.+++.|.++|++ ++.+|+||.|.|...++ ++ ..+.||++|.+.|.+|.
T Consensus 181 tg~~~i~KvD~~-~~~~L~GA~F~L~~~~g~~~~~~~~~~k~~~~~~~~~~~~~~g~~~~~tt~~~G~~~~~gL~~~~~~ 259 (319)
T 3pf2_A 181 TGGKRFVKKDST-ETQTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDA 259 (319)
T ss_dssp CEEEEEEEEETT-SCSBCCCCEEEEEETTSCBCBCCHHHHHHCCCGGGBSSCCCTTSBCEEECCTTSEEEEEEECCSTTS
T ss_pred EeeEEEEEeCCC-CCcccCCCEEEEEeCCCCEEeeeeeccccccccceeccccccCceeEEEECCCCEEEEccccccccc
Confidence 488899999974 48999999999976543 21 13579999999999999
Q ss_pred --Cc---ceEEeecc--cccccCCCceeEEecCCce
Q 001120 855 --PG---NFYLRPLL--KEYAFSPPAQAIELGSGES 883 (1150)
Q Consensus 855 --PG---~Y~~~~~~--key~~~p~~~~i~v~~g~~ 883 (1150)
|| +|+|++.. ..|.+.+.+..|+|.++..
T Consensus 260 ~~~G~~~~Y~l~EtkAP~GY~l~~~~~~f~v~~~~~ 295 (319)
T 3pf2_A 260 NAEGTAVTYKLKETKAPEGYVIPDKEIEFTVSQTSY 295 (319)
T ss_dssp CTTCCCEEEEEEEEECCTTBCCCSSCEEEEECTTSS
T ss_pred cCCCCcceEEEEEeeCCCCcccCCCcEEEEEecCCc
Confidence 68 99999873 5799999999999987753
No 34
>3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris}
Probab=96.34 E-value=0.0033 Score=74.83 Aligned_cols=79 Identities=10% Similarity=0.124 Sum_probs=64.7
Q ss_pred eeeeEEEEEEecCC--CCCcccceEEEEeCCCc------cc-----------------cceeecCCceEEEeecC-----
Q 001120 805 KLSQISVRIYSKDD--AGEPIPSVLLSLSGDDG------YR-----------------NNSVSWAGGSFHFDNLF----- 854 (1150)
Q Consensus 805 kl~~i~v~v~~~~~--~~~pl~gvllslsg~~~------~r-----------------~n~~t~~~G~~~f~~L~----- 854 (1150)
..|++.|.++|+++ .+.+|+||.|.|...++ ++ ..++||++|.+.|.+|.
T Consensus 352 ~~G~v~i~KvD~dd~~~~~~LaGAeF~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~~G~~~i~gL~~~d~~ 431 (488)
T 3uxf_A 352 KYGKVILTKTGTDDLADKTKYNGAQFQVYECTKTASGATLRDSDPSTQTVDPLTIGGEKTFTTAGQGTVEINYLRANDYV 431 (488)
T ss_dssp EEEEEEEEEEETTCCSCGGGGTTCEEEEEEEEEETTEEEECCSCTTSSSCCCCCBTTBSCEECBTTTEEEEEEEECTTEE
T ss_pred EEeeEEEEEecCCcCCCCcccCCCEEEEEeccCCcccceeeecccccccccceecCCceEEEECCCCEEEEcCeEeeccc
Confidence 46899999999853 58999999999965432 11 24689999999999999
Q ss_pred ----------CcceEEeecc--cccccCCCceeEEecCCce
Q 001120 855 ----------PGNFYLRPLL--KEYAFSPPAQAIELGSGES 883 (1150)
Q Consensus 855 ----------PG~Y~~~~~~--key~~~p~~~~i~v~~g~~ 883 (1150)
+|+|+|++.. ..|.+.+.+..|+|.+++.
T Consensus 432 ~~~~~~~~~~~~~Y~l~EtkAP~GY~l~~~pi~f~v~~~~~ 472 (488)
T 3uxf_A 432 NGAKKDQLTDEDYYCLVETKAPEGYNLQADPLPFRVLAEKA 472 (488)
T ss_dssp TTEECCSCCTTSEEEEEEEECCTTBCCCSSCEEECCCHHHH
T ss_pred ccccccccCCCCcEEEEEeeCCCCcccCCCcEEEEEecCcc
Confidence 7899999874 5799999999999988765
No 35
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=96.30 E-value=0.0056 Score=72.10 Aligned_cols=86 Identities=16% Similarity=0.196 Sum_probs=67.2
Q ss_pred EeeeeeEEEEEEecCCCCCcccceEEEEeCCCccccceeecCCceEEEeecCCcceEEeeccccc-ccCCCceeEEecCC
Q 001120 803 CQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEY-AFSPPAQAIELGSG 881 (1150)
Q Consensus 803 ~~kl~~i~v~v~~~~~~~~pl~gvllslsg~~~~r~n~~t~~~G~~~f~~L~PG~Y~~~~~~key-~~~p~~~~i~v~~g 881 (1150)
.+...+|..+|.|++ |+||+||.+.|.|.. .....||.+|.|.+ .|.||+|.|......| . +..+.|.|..+
T Consensus 333 ~~~~~gv~G~V~D~~--G~pi~gA~V~v~g~~--~~~~~Td~~G~y~~-~l~pG~Y~l~vs~~Gy~~--~~~~~v~v~~~ 405 (435)
T 3mn8_A 333 RQAHIGIKGLVTDAS--GFPIADANVYVAGLE--EKPMRTSKRGEYWR-LLTPGLYSVHASAFGYQT--SAPQQVRVTND 405 (435)
T ss_dssp HGGGSSEEEEEECSS--SCBCTTCEEEETTCT--TSCEECCTTCEEEE-CCCSEEEEEEEEBTTBCC--CCCEEEEECCC
T ss_pred ccccceeEEEEECCC--CCccCceEEEEeccc--ccceEeCCCCeEEE-ecCCCcEEEEEEEccccc--ceEEEEEEecC
Confidence 344567999999874 999999999998831 24678999999977 5999999999999999 5 45777888888
Q ss_pred c--eEEEEEEEEeeeE
Q 001120 882 E--SREVIFQATRVAY 895 (1150)
Q Consensus 882 ~--~~~v~~~~~r~~~ 895 (1150)
+ ...++|+..+..-
T Consensus 406 ~~~~~~~~~~L~~~~~ 421 (435)
T 3mn8_A 406 NQEALRLDFKLAPVET 421 (435)
T ss_dssp SSSCEECCEECCBC--
T ss_pred CcceeEEEEEEeecCC
Confidence 7 4477777766543
No 36
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=96.28 E-value=0.0046 Score=72.71 Aligned_cols=85 Identities=12% Similarity=0.244 Sum_probs=66.6
Q ss_pred eEEeeeeeEEEEEEecCCCCCcccceEEEEeCCCccccc--eeecCCceEEEeecCCcceEEeecccccccCCCceeEEe
Q 001120 801 FSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNN--SVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSPPAQAIEL 878 (1150)
Q Consensus 801 f~~~kl~~i~v~v~~~~~~~~pl~gvllslsg~~~~r~n--~~t~~~G~~~f~~L~PG~Y~~~~~~key~~~p~~~~i~v 878 (1150)
|-.+..+.|..+|.|++ |+||+||.+.+.|.. .. .+||.+|.|.+ .|.||+|.|......|. +..+.|.|
T Consensus 290 ~l~qv~~~I~G~V~D~~--g~pi~gA~V~v~g~~---~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~--~~~~~v~v 361 (426)
T 1uwy_A 290 YIKQVHLGVKGQVFDQN--GNPLPNVIVEVQDRK---HICPYRTNKYGEYYL-LLLPGSYIINVTVPGHD--PHITKVII 361 (426)
T ss_dssp HHGGGGCSEEEEEECTT--SCBCCSCEEEETTCC---CSSCCBCCTTCEEEE-CCCSEEEEEEEECSSSC--CEEEEEEE
T ss_pred hhccccceeEEEEECCC--CCccCceEEEEEecc---ccceeEeCCCCEEEe-ccCCeeEEEEEEEcCcc--cEEEEEEE
Confidence 43445678999999864 999999999999874 34 68999999998 59999999999888887 55566888
Q ss_pred cCCc----eEEEEEEEEee
Q 001120 879 GSGE----SREVIFQATRV 893 (1150)
Q Consensus 879 ~~g~----~~~v~~~~~r~ 893 (1150)
.+++ +..+.|+....
T Consensus 362 ~~~~~~~~~~~~~~~L~~~ 380 (426)
T 1uwy_A 362 PEKSQNFSALKKDILLPFQ 380 (426)
T ss_dssp CSSCSSSSCEECCEECSSC
T ss_pred eCCCccccceEEEEEEecC
Confidence 8776 55565555443
No 37
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=96.22 E-value=0.0071 Score=66.77 Aligned_cols=68 Identities=25% Similarity=0.542 Sum_probs=54.4
Q ss_pred EeceEEEEEEEeC-------CCccccCeEEEEcceee-eEeCCCceEEECccCCcc--EEEEEEeccccccceeeEEE
Q 001120 272 VTGFSVGGRVVDE-------NDMGVEGVKILVDGHER-SITDRDGYYKLDQVTSNR--YTIEAVKVHYKFNKLKEYMV 339 (1150)
Q Consensus 272 ~~g~sV~G~V~d~-------~G~plaGA~V~l~G~~~-~~TD~dG~f~l~~L~pG~--Ytv~~~~~~y~~~~~~~v~v 339 (1150)
..+++|+|.|... ....-+|++|++.|... ++||++|+|++.++|+|+ |+|..++++|.-.....+.+
T Consensus 155 ~~~~~vsGYi~~~~~~~~~~~~~~~~G~~V~i~gt~~sa~tD~~G~f~I~~vp~~~~~ytl~i~~~g~l~~~i~~~~v 232 (321)
T 3kcp_A 155 IEGYKVSGYILPDFSFDATVAPLVKAGFKVEIVGTELYAVTDANGYFEITGVPANASGYTLKISRATYLDRVIANVVV 232 (321)
T ss_dssp CSSEEEEEEEEESSCCCTTTHHHHHSCCEEEETTSSCEEECCTTSEEEEEEECCEEEEEEEEEECTEECCEEEEEEEE
T ss_pred CCCceEEEEEccccccccccchhccCCcEEEEEeccceeEECCCceEEEeccCCCCccEEEEEeecCceeeeeeeeEE
Confidence 4578999999863 24557899999977654 799999999999999998 99999999986655533333
No 38
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=96.17 E-value=0.0086 Score=76.32 Aligned_cols=80 Identities=26% Similarity=0.370 Sum_probs=63.8
Q ss_pred eeeeeEEEEEEecCCCCCcccceEEEEeCCCc-----cc--------cceeecCCceEEEeecCCcceEEeecc--cccc
Q 001120 804 QKLSQISVRIYSKDDAGEPIPSVLLSLSGDDG-----YR--------NNSVSWAGGSFHFDNLFPGNFYLRPLL--KEYA 868 (1150)
Q Consensus 804 ~kl~~i~v~v~~~~~~~~pl~gvllslsg~~~-----~r--------~n~~t~~~G~~~f~~L~PG~Y~~~~~~--key~ 868 (1150)
.+.+++.++++|+++ +++|+||.|.|...++ |+ ....||++|.+.|.+|.+|+|+|++.. +.|.
T Consensus 733 ~~~g~i~~~Kvd~~~-~~~L~GA~F~L~~~~~~~~~~y~~~~~~g~~~~~~Td~~G~~~~~gL~~G~Y~L~EtkAP~GY~ 811 (893)
T 2ww8_A 733 KKLGDIEFIKVNKND-KKPLRGAVFSLQKQHPDYPDIYGAIDQNGTYQNVRTGEDGKLTFKNLSDGKYRLFENSEPAGYK 811 (893)
T ss_dssp BCCEEEEEEEEETTT-CCBCSSCEEEEEEECSSCSSCEECSSSSCTTSSEECCTTCEEEEEEECSEEEEEEEEECCTTBC
T ss_pred eecceeEEEEEcCCC-CeecCCCEEEEEECCCCccccceeeccCCceEEEEECCCCcEEEecccCceEEEEEEeCCCCcC
Confidence 457899999999853 6899999999976532 21 246799999999999999999999873 5899
Q ss_pred cCCCc--eeEEecCCceE
Q 001120 869 FSPPA--QAIELGSGESR 884 (1150)
Q Consensus 869 ~~p~~--~~i~v~~g~~~ 884 (1150)
+.... ..|+|.+++..
T Consensus 812 l~~~~~~i~ftI~~~~~~ 829 (893)
T 2ww8_A 812 PVQNKPIVAFQIVNGEVR 829 (893)
T ss_dssp CCEEEEEEEEEEETTEEE
T ss_pred cCCCCccEEEEEecCccc
Confidence 87643 67889887644
No 39
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=95.98 E-value=0.0042 Score=62.85 Aligned_cols=54 Identities=17% Similarity=0.409 Sum_probs=40.7
Q ss_pred cccceeecCCceEEEeecCCcceEEeecc---cc--cccCCC----ceeEEecCCceEEEEEE
Q 001120 836 YRNNSVSWAGGSFHFDNLFPGNFYLRPLL---KE--YAFSPP----AQAIELGSGESREVIFQ 889 (1150)
Q Consensus 836 ~r~n~~t~~~G~~~f~~L~PG~Y~~~~~~---ke--y~~~p~----~~~i~v~~g~~~~v~~~ 889 (1150)
|..-.++|++|.|.|.+|+||+|||...+ .+ |...+. .+.|+|+.||+.+|++.
T Consensus 107 y~r~t~~D~~G~F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~l~k~Vtv~~Ge~~~v~L~ 169 (170)
T 1xpn_A 107 YVREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTKLVTVSGSQPQKVLLT 169 (170)
T ss_dssp HCEEEEECSSCEEEECSCCSEEEEEEEEEEEEEEETTEEEEEEEEEEEEEEECCSSCEEEEEC
T ss_pred ceeEEEecCCCcEEecCCCCccEEEEEEEeccCccccccccccceEEEEEEeCCCcEEEEEec
Confidence 66777899999999999999999998743 22 221121 24489999999998873
No 40
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=95.82 E-value=0.0074 Score=65.35 Aligned_cols=48 Identities=25% Similarity=0.430 Sum_probs=41.7
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----ccee--------------eeEeCCCceEEECccCCccEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTI 322 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~~--------------~~~TD~dG~f~l~~L~pG~Ytv 322 (1150)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|+|.-+.||.|.+
T Consensus 103 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~ 169 (254)
T 2boy_A 103 LIFRGEVVDQEGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI 169 (254)
T ss_dssp EEEEEEEECTTSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccC
Confidence 4689999999999999999999 3422 3589999999999999999986
No 41
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=95.76 E-value=0.015 Score=64.72 Aligned_cols=48 Identities=27% Similarity=0.359 Sum_probs=41.5
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----cce--------------eeeEeCCCceEEECccCCccEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGH--------------ERSITDRDGYYKLDQVTSNRYTI 322 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~--------------~~~~TD~dG~f~l~~L~pG~Ytv 322 (1150)
..|.|+|+|.+|+||+||.|.+ +|. -...||++|+|.|.-+.||.|.+
T Consensus 137 l~v~G~V~D~~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~i 203 (312)
T 2xsu_A 137 LIIEGTVTDTEGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGC 203 (312)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCcccC
Confidence 4689999999999999999999 332 13589999999999999999985
No 42
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=95.72 E-value=3.5 Score=46.12 Aligned_cols=295 Identities=15% Similarity=0.145 Sum_probs=139.8
Q ss_pred CCceEEEEEeccchhhhhccccceeEEEEeCCCceEEeccCCCCceEEE--EEeCCCeEEeee------c---cceeEEe
Q 001120 736 LSGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNV--EASKPGYYLRQV------G---PNSFSCQ 804 (1150)
Q Consensus 736 l~gv~i~i~~~~~~~~~~~~~~~~~~~~~Td~~G~f~~gpL~~~~~y~v--~a~k~gy~l~~~------~---~~~f~~~ 804 (1150)
+.|-.|.....+.. .+......+....-+|.+..|.++..|.+ .|...+-.-.+. . +-.+...
T Consensus 32 ~~~Y~v~~~~~~~~------~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~p~p~~l~~~ 105 (375)
T 3t1w_A 32 ITGYRITTTPTNGQ------QGNSLEEVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPEVPQLTDLSFV 105 (375)
T ss_dssp CCEEEEEEEETTCT------TSCCEEEEEETTCCEEEECCCCTTCCEEEEEEEEETTEECCCEEEEECCCCCCCSCCEEE
T ss_pred eeeEEEEEEECCCC------CCcceeEEcCCCccEEEEcCCcCCCEEEEEEEEEcCCCCCCcEEeeEcCCCCCCceEEEE
Confidence 45556666544321 11223345566778899999998766655 444333211111 0 1233333
Q ss_pred ee--eeEEEEEEecCCCCCcccceEEEEeCCCc---cccceeecCCceEEEeecCCcceE-Ee--ecccccccCCCceeE
Q 001120 805 KL--SQISVRIYSKDDAGEPIPSVLLSLSGDDG---YRNNSVSWAGGSFHFDNLFPGNFY-LR--PLLKEYAFSPPAQAI 876 (1150)
Q Consensus 805 kl--~~i~v~v~~~~~~~~pl~gvllslsg~~~---~r~n~~t~~~G~~~f~~L~PG~Y~-~~--~~~key~~~p~~~~i 876 (1150)
.. .+|.|.-... .+.++.+-.+.....+. ..........-.+.+.+|.||+-| ++ +.-..-.-.|+...+
T Consensus 106 ~~~~~si~l~W~~~--~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~ 183 (375)
T 3t1w_A 106 DITDSSIGLRWTPL--NSSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQ 183 (375)
T ss_dssp CCCSSEEEEECCCC--CCTTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTEECCCEEEEE
T ss_pred ecCCCeEEEEEECC--CCCCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCcccCCeeeee
Confidence 32 3444444332 13456666665543321 112234556678999999999744 44 332211111111111
Q ss_pred EecCCceEEEEEEEEeeeEeEEEeeE--cCCCCccCCcEEEEEeCC--CceeEEEeeCCCceEEecCCCCCcEEEEEEEE
Q 001120 877 ELGSGESREVIFQATRVAYSATGTIT--LLSGQPKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVK 952 (1150)
Q Consensus 877 ~v~~g~~~~v~~~~~r~~~s~~G~v~--~~~g~p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~ 952 (1150)
.........+.+.... ..++ .|+ .+.+.++.+-.|+....+ ............-.|.|.||.||+.|.+++.+
T Consensus 184 ~t~~~~p~~l~~~~~~-~~si--~l~W~~p~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 260 (375)
T 3t1w_A 184 QTAVPPPTDLRFTNIG-PDTM--RVTWAPPPSIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSS 260 (375)
T ss_dssp ECCCCCCEEEEEESCC-SSCE--EEEEECCSSCCCCEEEEEEEEGGGTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEE
T ss_pred ecCCCCCceeEEEecc-cCEE--EEEEcCCCCCCccEEEEEEEeCCCCCCcEEEEcCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 1111122222211000 0101 111 122344566666665432 22333344455589999999999999999997
Q ss_pred ecCCCCcceeccCCceEEEEecCccceeceEEEEecCCcEEEEEEEEeccccccccceEEEEEecCCCCceEEEEeeCCc
Q 001120 953 KDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLPMS 1032 (1150)
Q Consensus 953 ~~~~~~~~i~~~~p~~~~v~v~~~d~~~~~f~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~v~~~~~~~~~ 1032 (1150)
....| ...|....+.....--.++.+..+. ...+.|+ =... ........|..+.............-...
T Consensus 261 ~~~~g-----~s~~~~~~~~t~p~~P~~l~~~~~~-~~sv~l~--W~~p--~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~ 330 (375)
T 3t1w_A 261 VYEQH-----ESTPLRGRQKTGLDSPTGIDFSDIT-ANSFTVH--WIAP--RATITGYRIRHHPEHFSGRPREDRVPHSR 330 (375)
T ss_dssp EETTE-----ECCCEEEEEECCCCCCEEEEEESCC-SSCEEEE--EECC--SSCCSEEEEEEEETTCCSSCEEEEEETTC
T ss_pred EcCCC-----cCCceeeEEecCCCCCCccEeeecc-CCEEEEE--ECCC--CcceeeEEEEEEECCCCCcceeEEcCCCc
Confidence 54322 1223333333222223343332221 1222122 2221 12234555666554432333332222345
Q ss_pred eeEEeecCCCC-cEEEEEEe
Q 001120 1033 NFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 1033 ~~f~~~~l~~~-~y~v~l~s 1051 (1150)
..|.+..|.+| .|.+++..
T Consensus 331 ~~~~i~~L~p~t~Y~~~V~A 350 (375)
T 3t1w_A 331 NSITLTNLTPGTEYVVSIVA 350 (375)
T ss_dssp CEEEECSCCTTCEEEEEEEE
T ss_pred cEEEECCCCCCCEEEEEEEE
Confidence 67899999999 69888886
No 43
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=95.66 E-value=2.4 Score=56.86 Aligned_cols=163 Identities=16% Similarity=0.158 Sum_probs=88.9
Q ss_pred cCccEEEEEEc-CCceEEeeccEEEEEccccee----eeeeeeecCcEEEEEEE--e-CCcceec---eEEEEEECCCCc
Q 001120 129 IPGKYKLRASH-PNLSVEVRGSTEVELGFENGE----VDDIFFAPGYEIRGLVV--A-QGNPILG---VHIYLYSDDVGK 197 (1150)
Q Consensus 129 ~pG~Y~l~a~~-~g~~~~~~~~~~V~v~~~~~~----~~~~l~i~g~~i~G~V~--~-~G~Pl~G---a~V~L~~~~~~~ 197 (1150)
.+|.|.|.+.. .+..+. .+..|.+...... .+..+--+|-.|.-++. + +..|+.. +.|.|.+.++..
T Consensus 71 ~~~~~~l~~~~~~~~~f~--~~~~v~~~~~~~~~fi~TDr~iYrPGqtV~~r~~~~~~~~~p~~~~~~v~v~l~dp~g~~ 148 (1325)
T 2pn5_A 71 TAGNYKITIDGQRGFSFH--KEAELVYLSKSISGLIQVDKPVFKPGDTVNFRVIVLDTELKPPARVKSVYVTIRDPQRNV 148 (1325)
T ss_dssp CSCCEEEEEEEESSCCCE--EEEEEEECSCSEEEEEEESCSEECTTCEEEEEEEEEETTSSCCSSCCEEEEEEECTTCCE
T ss_pred CCCcEEEEEEecCCccEE--EEEEEEEEcccccEEEecCCCccCCCCEEEEEEEEecCCccccccCccEEEEEECCCCCE
Confidence 35789887765 455443 2245555433332 23445556766665544 3 4677764 678888764332
Q ss_pred ccCCCCCCCcccccceeeEEEeCCCceEEE-----CccCCeeEEEEEEEecCC---eEEE---ecCceEEEEEeccceee
Q 001120 198 VDCPQGSGNALGERKALCHAVSDADGKFMF-----KSVPCGQYELVPHYKGEN---TVFD---VSPSLVSMSVRHQHVTV 266 (1150)
Q Consensus 198 ~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f-----~~LppG~Y~v~~~~~~~~---~~~~---~~P~~~~vtV~~~~~~l 266 (1150)
+ ......++..|.|.. .+.+.|.|+|.+...+.. ..|. +.+...++++......+
T Consensus 149 i--------------~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~~~~ 214 (1325)
T 2pn5_A 149 I--------------RKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVEGEELVSKTFEVKEYVLSTFDVQVMPSVIPL 214 (1325)
T ss_dssp E--------------EEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEETTEEEEEEEEEECCSCCCCEEEEEEESSCCB
T ss_pred E--------------EEEecccCCCCeEecceECCCCccccceEEEEEeCCCcEEEEEEEEEeccCceEEEEEecCceEE
Confidence 1 123445667776654 344679999999754321 1222 23334455443321111
Q ss_pred eccEEEec--eEEEEEEEeCCCccccC-eEEEE--cc---eeeeEeCCCceEEE
Q 001120 267 PEKFQVTG--FSVGGRVVDENDMGVEG-VKILV--DG---HERSITDRDGYYKL 312 (1150)
Q Consensus 267 ~~~f~~~g--~sV~G~V~d~~G~plaG-A~V~l--~G---~~~~~TD~dG~f~l 312 (1150)
..+ +.+.+...--.|+|++| |.|.+ ++ ....++|.+|.+.+
T Consensus 215 -----~~~~~~~v~v~a~Y~~G~Pv~G~~~v~v~~~~~~~~~~~~~d~~G~~~~ 263 (1325)
T 2pn5_A 215 -----EEHQAVNLTIEANYHFGKPVQGVAKVELYLDDDKLKLKKELTVYGKGQV 263 (1325)
T ss_dssp -----GGGCEEEEEEEEEESSSCBCEEEEEEEEEETTTTEEEEEEEEEESEEEE
T ss_pred -----ecCCeEEEEEEEEEcCCCeeeeEEEEEEEECCCCcceeEEEecCcEEEE
Confidence 112 23333334447999999 77776 22 12357889998776
No 44
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=95.55 E-value=0.016 Score=64.44 Aligned_cols=48 Identities=27% Similarity=0.487 Sum_probs=41.6
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----ccee--------------eeEeCCCceEEECccCCccEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTI 322 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~~--------------~~~TD~dG~f~l~~L~pG~Ytv 322 (1150)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|+|.-+.||.|.+
T Consensus 133 l~v~G~V~D~~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~~ 199 (311)
T 2azq_A 133 MFLQGQVFDANGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGC 199 (311)
T ss_dssp EEEEEEEECSSSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEEC
T ss_pred EEEEEEEEcCCCCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcCC
Confidence 4689999999999999999999 3422 2589999999999999999985
No 45
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=95.51 E-value=0.016 Score=62.40 Aligned_cols=48 Identities=29% Similarity=0.465 Sum_probs=41.5
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----cce-------------------eeeEeCCCceEEECccCCccEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGH-------------------ERSITDRDGYYKLDQVTSNRYTI 322 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~-------------------~~~~TD~dG~f~l~~L~pG~Ytv 322 (1150)
..|.|+|+|.+|+||+||.|.+ +|. -...||++|+|+|.-+.||.|.+
T Consensus 79 i~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 150 (241)
T 2bum_B 79 VIVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPW 150 (241)
T ss_dssp EEEEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCcccc
Confidence 4689999999999999999999 332 12489999999999999999987
No 46
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=95.44 E-value=1.6 Score=47.23 Aligned_cols=195 Identities=16% Similarity=0.225 Sum_probs=94.5
Q ss_pred ecCCceEEEeecCCcceE-Ee--ecccccccCCCceeEEecC--CceEEEEEEEEeeeEeEEEeeE-cCCCCccCCcEEE
Q 001120 842 SWAGGSFHFDNLFPGNFY-LR--PLLKEYAFSPPAQAIELGS--GESREVIFQATRVAYSATGTIT-LLSGQPKDGVSVE 915 (1150)
Q Consensus 842 t~~~G~~~f~~L~PG~Y~-~~--~~~key~~~p~~~~i~v~~--g~~~~v~~~~~r~~~s~~G~v~-~~~g~p~~gv~v~ 915 (1150)
....-.+.+.+|.||+-| ++ +.-..-.-.++...+...+ ..-..+.+... ...++ .|+ .....++.+-.|+
T Consensus 70 ~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~~~-~~~sv--~l~W~~p~~~~~~Y~v~ 146 (290)
T 3r8q_A 70 APDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDA-TETTI--TISWRTKTETITGFQVD 146 (290)
T ss_dssp CTTCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCCCCCEEEEEEEE-CSSCE--EEEEECCSCCCCEEEEE
T ss_pred CCCccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCCCCCceeEEEEc-CCCeE--EEEEeCCCCcccEEEEE
Confidence 344568999999999755 44 3322222122222222221 12223322210 01111 111 1112356677777
Q ss_pred EEeCCCc-eeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCCCcceeccCCceEEEEecCccceeceEEEEecCCcEEE
Q 001120 916 ARSESKG-YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFEQPEKTIL 994 (1150)
Q Consensus 916 ~~~~~~~-~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d~~~~~f~~~~~~~~~~i 994 (1150)
....++. ..........-.|.|.||.||+.|.+++.+....| .+.|..........--.++.+... ....+.|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g-----~s~~~~~~~~t~p~~P~~l~~~~~-~~~sv~l 220 (290)
T 3r8q_A 147 AVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNA-----RSSPVVIDASTAIDAPSNLRFLAT-TPNSLLV 220 (290)
T ss_dssp EEESSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTE-----ECCCEEEEEECCCCCCEEEEEEEE-ETTEEEE
T ss_pred EEECCCCcceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCc-----ccCCEEEEecCCCCCCCccEEEee-CCCEEEE
Confidence 6654422 23333444566899999999999999999754322 223444444333333344444333 1222222
Q ss_pred EEEEEeccccccccceEEEEEecCCCCceEEEE-ee-CCceeEEeecCCCC-cEEEEEEe
Q 001120 995 SGHVEGNRIKELNSHLLVEIKSASDTSKVESVI-SL-PMSNFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 995 ~g~V~~~~~~~~~~~l~v~l~~~~~~~~v~~~~-~~-~~~~~f~~~~l~~~-~y~v~l~s 1051 (1150)
+ =... ........|..+...... .... .. .....|.+..|.+| .|.+++..
T Consensus 221 ~--W~~p--~~~~~~Y~v~~~~~~~~~--~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 274 (290)
T 3r8q_A 221 S--WQPP--RARITGYIIKYEKPGSPP--REVVPRPRPGVTEATITGLEPGTEYTIYVIA 274 (290)
T ss_dssp E--EECC--SSCCCEEEEEEECTTSCC--EECSSCCCTTCCEEEECSCCTTCEEEEEEEE
T ss_pred E--EeCC--CCcccEEEEEEEeCCCCc--ceeEeccCCCccEEEECCCCCCCEEEEEEEE
Confidence 2 1111 122344556555532221 1111 11 23467889999998 68888875
No 47
>3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A
Probab=95.40 E-value=0.033 Score=62.70 Aligned_cols=75 Identities=13% Similarity=0.191 Sum_probs=54.3
Q ss_pred EEeeEcCCCCccCCcEEEEEeCCCcee-------------------------EEEeeCCCceEEecCCC-------CC--
Q 001120 898 TGTITLLSGQPKDGVSVEARSESKGYY-------------------------EETVTDTSGSYRLRGLH-------PD-- 943 (1150)
Q Consensus 898 ~G~v~~~~g~p~~gv~v~~~~~~~~~~-------------------------~~~~Td~~G~~~i~gL~-------Pg-- 943 (1150)
+=+|..-++.+|+||.|++....+... ...+||++|.+.|.||. ||
T Consensus 186 i~KvD~~~~~~L~GA~F~L~~~~g~~~~~~~~~~k~~~~~~~~~~~~~~g~~~~~tt~~~G~~~~~gL~~~~~~~~~G~~ 265 (319)
T 3pf2_A 186 FVKKDSTETQTLGGAEFDLLASDGTAVKWTDALIKANTNKNYIAGEAVTGQPIKLKSHTDGTFEIKGLAYAVDANAEGTA 265 (319)
T ss_dssp EEEEETTSCSBCCCCEEEEEETTSCBCBCCHHHHHHCCCGGGBSSCCCTTSBCEEECCTTSEEEEEEECCSTTSCTTCCC
T ss_pred EEEeCCCCCcccCCCEEEEEeCCCCEEeeeeeccccccccceeccccccCceeEEEECCCCEEEEccccccccccCCCCc
Confidence 455665578999999999987653211 26789999999999999 58
Q ss_pred -cEEEEEEEEecCCCCcceeccCCceEEEEecCccc
Q 001120 944 -TTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDI 978 (1150)
Q Consensus 944 -~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d~ 978 (1150)
+||.++++++++| . . .+..+.++|...+.
T Consensus 266 ~~Y~l~EtkAP~GY--~-l---~~~~~~f~v~~~~~ 295 (319)
T 3pf2_A 266 VTYKLKETKAPEGY--V-I---PDKEIEFTVSQTSY 295 (319)
T ss_dssp EEEEEEEEECCTTB--C-C---CSSCEEEEECTTSS
T ss_pred ceEEEEEeeCCCCc--c-c---CCCcEEEEEecCCc
Confidence 9999999999853 1 1 23445555555444
No 48
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=95.34 E-value=0.047 Score=64.94 Aligned_cols=70 Identities=20% Similarity=0.211 Sum_probs=50.9
Q ss_pred eEEEEEEeecCCccccCCCCCCcceEEEEEeCCCceEEEEEeCCCceEEEccccCccEEEEEEcCCceEEeeccEEEEEc
Q 001120 76 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVELG 155 (1150)
Q Consensus 76 ~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g~~i~~ttTd~~G~f~f~~L~pG~Y~l~a~~~g~~~~~~~~~~V~v~ 155 (1150)
+|+|+|. | .|.+.+.|.+.+..+. ...+.||++|.|++.+|+||+|+|.+.++|+... ...|+|.
T Consensus 259 tVsG~V~---G--------~~~~~~avv~~~~k~~-qywt~td~~G~FtI~~V~pGtY~L~a~~~G~~~~---~~~VtV~ 323 (508)
T 1nkg_A 259 KVAGTAS---G--------ADSSMDWVVHWYNDAA-QYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVA---TSSVTVS 323 (508)
T ss_dssp EEEEEEE---S--------SCTTSCEEEEEECSSC-EEEEECCTTCEEECCCBCSEEEEEEEEETTEEEE---EEEEEEC
T ss_pred EEEEEEc---C--------ccCCceEEEEEcCCCc-eeEEEECCCCcEEeCCcCCceEEEEEEECceEEE---EeEEEEc
Confidence 6889876 3 4433344444444443 4578899999999999999999999999999544 3567777
Q ss_pred cccee
Q 001120 156 FENGE 160 (1150)
Q Consensus 156 ~~~~~ 160 (1150)
.+...
T Consensus 324 aG~t~ 328 (508)
T 1nkg_A 324 AGSTT 328 (508)
T ss_dssp TTCEE
T ss_pred CCCee
Confidence 66543
No 49
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=95.26 E-value=0.013 Score=55.54 Aligned_cols=59 Identities=20% Similarity=0.328 Sum_probs=47.1
Q ss_pred eEEEEEEeecCCccccCCCCCCcceEEEEEeCCCceEEEEEeCCCceEEE---ccccCccEEEEEEcCCc
Q 001120 76 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLF---KNIIPGKYKLRASHPNL 142 (1150)
Q Consensus 76 ~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g~~i~~ttTd~~G~f~f---~~L~pG~Y~l~a~~~g~ 142 (1150)
.|+-.|++.. .|.|.+|+.|+|...+ +.+.+.+||+||+... ..+.+|.|+|+.....|
T Consensus 11 ~lstHVLDt~-------~G~PAagv~V~L~~~~-~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~tg~Y 72 (116)
T 3qva_A 11 TLSTHILDIS-------TGTPAEGVTVSLSREG-ETLANLVTNAQGRIATFSAAPLPAGRYCLTAETGAW 72 (116)
T ss_dssp CEEEEEEETT-------TTEECTTCEEEEEETT-EEEEEEECCTTSEECCSCSSCBCSSEEEEEECHHHH
T ss_pred CeeeEEeecC-------CCcCCCCCEEEEEEcc-EeEEEeccCCCCCccccccccCCCceEEEEEeHHHH
Confidence 4788888752 5899999999999776 6788999999999842 34678999999865444
No 50
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=95.20 E-value=4 Score=50.19 Aligned_cols=159 Identities=19% Similarity=0.199 Sum_probs=82.5
Q ss_pred cE-EEEEEcCCceEEeeccEEEEEccccee----eeeeeeecCcEEEEEEE--e-CCcceec-eEEEEEECCCCcccCCC
Q 001120 132 KY-KLRASHPNLSVEVRGSTEVELGFENGE----VDDIFFAPGYEIRGLVV--A-QGNPILG-VHIYLYSDDVGKVDCPQ 202 (1150)
Q Consensus 132 ~Y-~l~a~~~g~~~~~~~~~~V~v~~~~~~----~~~~l~i~g~~i~G~V~--~-~G~Pl~G-a~V~L~~~~~~~~~~~~ 202 (1150)
.| .|.+..++..+. ..|.+...... .+..+--+|-.|.-++. + +..|+.+ +.|.|.+.++..+
T Consensus 82 ~~v~l~~~~~~~~~~----~~v~~~~~~~~~fi~TDR~iYrPGqtV~~r~i~~d~~~~p~~~~v~v~l~dP~g~~i---- 153 (645)
T 2hr0_A 82 KFVTVQATFGTQVVE----KVVLVSLQSGYLFIQTDKTIYTPGSTVLYRIFTVNHKLLPVGRTVMVNIENPEGIPV---- 153 (645)
T ss_dssp CEEEEEEEETTEEEE----EEEEEECCCCEEEEEESCSBCCTTSEEEEEEEEECTTSCBCCCEEEEEEECTTSCEE----
T ss_pred eEEEEEEEeCCeEEE----EEEEEecCCccEEEEcCCccCCCCCEEEEEEEEECCCCcccCceEEEEEECCCCCEE----
Confidence 47 677766665432 23434332221 13344446666666654 2 3456543 4566665543221
Q ss_pred CCCCcccccceeeEEEeC-CCceEEE-----CccCCeeEEEEEEEecC--C---eEEE---ecCceEEEEEeccceeeec
Q 001120 203 GSGNALGERKALCHAVSD-ADGKFMF-----KSVPCGQYELVPHYKGE--N---TVFD---VSPSLVSMSVRHQHVTVPE 268 (1150)
Q Consensus 203 g~~~~~~~g~~~~~a~TD-a~G~f~f-----~~LppG~Y~v~~~~~~~--~---~~~~---~~P~~~~vtV~~~~~~l~~ 268 (1150)
......+| ..|.|.+ .+.+.|.|+|.+...+. . ..|. +.|..+++++.....
T Consensus 154 ----------~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~~~~F~VeeYvlP~feV~i~~~~~---- 219 (645)
T 2hr0_A 154 ----------KQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYENSPQQVFSTEFEVKEYVLPSFEVIVEPTEK---- 219 (645)
T ss_dssp ----------EEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEETTCTTSEEEEEEECCCSCCCCCEEEEEESSS----
T ss_pred ----------EEEEeeccccCCeEEEEEECCCccccccEEEEEEECCCCCceEEEEEEEeeccCCeEEEEEEcCce----
Confidence 11334555 7886654 34467999999975321 1 1232 344445555543221
Q ss_pred cEEEec----eEEEEEEEeCCCccccC-eEEEE----ccee---------eeEeCCCceEEEC
Q 001120 269 KFQVTG----FSVGGRVVDENDMGVEG-VKILV----DGHE---------RSITDRDGYYKLD 313 (1150)
Q Consensus 269 ~f~~~g----~sV~G~V~d~~G~plaG-A~V~l----~G~~---------~~~TD~dG~f~l~ 313 (1150)
+...+ +.+.....---|+|++| |.|.+ ++.. ...+|.+|.|.|.
T Consensus 220 -~~~~~~~~~~~v~v~a~Y~~G~Pv~G~a~v~~~~~~~~~~~~~~~~~~~~~~~dg~g~~~l~ 281 (645)
T 2hr0_A 220 -FYYIYNEKGLEVTITARFLYGKKVEGTAFVIFGIQDGEQRISLPESLKRIPIEDGSGEVVLS 281 (645)
T ss_dssp -SEETTCTTCEEEEEEEECTTSCBCCEEEEEEEEEEETTEEEECGGGCEEEEEBTTEEEEEEC
T ss_pred -eEecCCCcEEEEEEEEEEcCCCeeeeEEEEEEEEeeCCeeeecCchheeEEeeCCeEEEEEe
Confidence 11122 23333444457999999 77654 2211 2358899999974
No 51
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=95.13 E-value=0.019 Score=63.25 Aligned_cols=49 Identities=31% Similarity=0.432 Sum_probs=42.3
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----cce-------------eeeEeCCCceEEECccCCccEEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGH-------------ERSITDRDGYYKLDQVTSNRYTIE 323 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~-------------~~~~TD~dG~f~l~~L~pG~Ytv~ 323 (1150)
..|.|+|+|.+|+||+||.|.+ +|. -...||++|+|+|.-+.||.|.+.
T Consensus 134 l~v~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~p 200 (293)
T 1tmx_A 134 CWVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPIP 200 (293)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccCC
Confidence 4689999999999999999999 342 125899999999999999999864
No 52
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=95.12 E-value=0.022 Score=61.78 Aligned_cols=49 Identities=27% Similarity=0.417 Sum_probs=41.6
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----ccee--------------eeEeCCCceEEECccCCccEEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTIE 323 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~~--------------~~~TD~dG~f~l~~L~pG~Ytv~ 323 (1150)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|-+-
T Consensus 100 l~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypip 167 (260)
T 3th1_A 100 LIIRGTVRSDTGELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQIP 167 (260)
T ss_dssp EEEEEEEEETTSCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCCC
Confidence 4589999999999999999998 3321 25899999999999999999763
No 53
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=95.10 E-value=0.038 Score=61.51 Aligned_cols=53 Identities=23% Similarity=0.396 Sum_probs=43.4
Q ss_pred eEEEEEEeecCCccccCCCCCCcceEEEEEeCC--Cc------------eEEEEEeCCCceEEEccccCccEEEE
Q 001120 76 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--GD------------LISSVITSSEGSYLFKNIIPGKYKLR 136 (1150)
Q Consensus 76 ~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~--g~------------~i~~ttTd~~G~f~f~~L~pG~Y~l~ 136 (1150)
.+.|+|.+. +|+|++||.|+++..+ |. .-....||++|+|+|.-|.||.|.+.
T Consensus 138 ~v~G~V~D~--------~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ip 204 (312)
T 2xsu_A 138 IIEGTVTDT--------EGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGCP 204 (312)
T ss_dssp EEEEEEEET--------TSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEECC--------CCCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCcccCC
Confidence 478999985 4699999999999654 31 12467899999999999999999864
No 54
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=95.09 E-value=0.044 Score=65.16 Aligned_cols=66 Identities=12% Similarity=0.067 Sum_probs=48.2
Q ss_pred eEEEEEEEeCCCccccC-eEEEEc--c-eeeeEeCCCceEEECccCCccEEEEEEeccccccceeeEEEcCCcc
Q 001120 275 FSVGGRVVDENDMGVEG-VKILVD--G-HERSITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNMA 344 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaG-A~V~l~--G-~~~~~TD~dG~f~l~~L~pG~Ytv~~~~~~y~~~~~~~v~v~p~~~ 344 (1150)
.+|+|+|. |+|.+. |.|.++ + +.-+.||++|.|++.+|+||+|+|.+.++++.+... .+.|.++..
T Consensus 258 GtVsG~V~---G~~~~~~avv~~~~k~~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~~~~~~-~VtV~aG~t 327 (508)
T 1nkg_A 258 GKVAGTAS---GADSSMDWVVHWYNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATS-SVTVSAGST 327 (508)
T ss_dssp BEEEEEEE---SSCTTSCEEEEEECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEE-EEEECTTCE
T ss_pred cEEEEEEc---CccCCceEEEEEcCCCceeEEEECCCCcEEeCCcCCceEEEEEEECceEEEEe-EEEEcCCCe
Confidence 58999988 665332 333322 2 233799999999999999999999999999754443 577777653
No 55
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=95.04 E-value=0.019 Score=63.90 Aligned_cols=48 Identities=21% Similarity=0.432 Sum_probs=41.3
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----ccee----------------eeEeCCCceEEECccCCccEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGHE----------------RSITDRDGYYKLDQVTSNRYTI 322 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~~----------------~~~TD~dG~f~l~~L~pG~Ytv 322 (1150)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|+|.-+.||.|.+
T Consensus 134 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 202 (311)
T 1dmh_A 134 LILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC 202 (311)
T ss_dssp EEEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEEcCCCCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccC
Confidence 4589999999999999999998 3321 2589999999999999999986
No 56
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=94.98 E-value=1 Score=61.78 Aligned_cols=210 Identities=15% Similarity=0.106 Sum_probs=105.1
Q ss_pred ceEEEEEeCCCceEEE-EEeCCCceEEE------ccccCccEEEEEEcCCce-------EEe----eccEEEEEccccee
Q 001120 99 NVNVELLSHSGDLISS-VITSSEGSYLF------KNIIPGKYKLRASHPNLS-------VEV----RGSTEVELGFENGE 160 (1150)
Q Consensus 99 Gv~V~L~~~~g~~i~~-ttTd~~G~f~f------~~L~pG~Y~l~a~~~g~~-------~~~----~~~~~V~v~~~~~~ 160 (1150)
-++|+|.+++|..+.+ ..+...|.|.| ++.+.|.|.|++...++. +.+ .++..|++....
T Consensus 158 ~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~s~~F~VeEYvlP~feV~i~~~~-- 235 (1676)
T 3cu7_A 158 ETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKEDFSTTGTAYFEVKEYVLPHFSVSIEPEY-- 235 (1676)
T ss_dssp CEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSSSCCCEEEEEEEECEECCCSSEECCEESC--
T ss_pred ceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecCCCCceEEEEEEEccccCceEEEEEEccC--
Confidence 3789999999955432 33448898884 445679999999865421 111 122233332111
Q ss_pred eeeeeeecC-cEEEEEEEe---CCcce-ec-eEEEEEECCCCcccCCCCCCC-cccccceeeEEEeCCCceEEEC----c
Q 001120 161 VDDIFFAPG-YEIRGLVVA---QGNPI-LG-VHIYLYSDDVGKVDCPQGSGN-ALGERKALCHAVSDADGKFMFK----S 229 (1150)
Q Consensus 161 ~~~~l~i~g-~~i~G~V~~---~G~Pl-~G-a~V~L~~~~~~~~~~~~g~~~-~~~~g~~~~~a~TDa~G~f~f~----~ 229 (1150)
..+.+.. -.+..+|.. -|.|+ .| +.|.+.... .|...... .+. .... ++..+|.+.|. .
T Consensus 236 --~~~~~~d~~~~~v~v~A~Y~yG~PV~~G~a~v~~~~~~----~~~~~~~~~~~~---~~~~-~~l~~G~~~~~~~~~~ 305 (1676)
T 3cu7_A 236 --NFIGYKNFKNFEITIKARYFYNKVVTEADVYITFGIRE----DLKDDQKEMMQT---AMQN-TMLINGIAQVTFDSET 305 (1676)
T ss_dssp --SEECSTTSSCCEEEECEEETTTEECSEEEEEEEEEEES----CSSCSCCEEESS---CCBC-CCEETTBEEEECCTTT
T ss_pred --cEEEecCCCEEEEEEEEEEcCCceeecCeEEEEEEEee----ccCCCcceeccc---ceEE-EEeccceEEEEEeHHH
Confidence 1122222 344445543 59999 88 666544321 00000000 000 0011 12137777662 1
Q ss_pred cC------------CeeEEEEEEEe---cCCeE------EEecCceEEEEEeccceeeeccEEEec--eEEEEEEEeCCC
Q 001120 230 VP------------CGQYELVPHYK---GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDEND 286 (1150)
Q Consensus 230 Lp------------pG~Y~v~~~~~---~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~G 286 (1150)
+. +..+.|.+... +.... +.+.+....+.+... + .+-.+| +.+.-.+.+.+|
T Consensus 306 ~~~~~~~~~~~~~~~~~l~v~a~V~E~~gg~~~~~~~~~i~i~~~~~~i~~~~~----~-~~~k~g~p~~~~v~~~~~dG 380 (1676)
T 3cu7_A 306 AVKELSYYSLEDLNNKYLYIAVTVIESTGGFSEEAEIPGIKYVLSPYKLNLVAT----P-LFLKPGIPYPIKVQVKDSLD 380 (1676)
T ss_dssp TTTTTSSCCCSTTCCSEEEEEEEEEESSSCCCEEEEECCCEECSCSEEECCBSC----C-SEECSSSCEEEEEEEEETTC
T ss_pred hhhhccccchhhccCceEEEEEEEEECCCCeEEEeeEEEEEEEeeeEEEEEecC----C-CcccCCCcEEEEEEEEcCCC
Confidence 11 33566665421 11111 123333333332211 1 122233 345556788899
Q ss_pred ccccCeEEEEcc-ee-------------eeEeCCCc--eEEECccCCcc--EEEEEEe
Q 001120 287 MGVEGVKILVDG-HE-------------RSITDRDG--YYKLDQVTSNR--YTIEAVK 326 (1150)
Q Consensus 287 ~plaGA~V~l~G-~~-------------~~~TD~dG--~f~l~~L~pG~--Ytv~~~~ 326 (1150)
+|+++..|.+.. .. ..+||++| .|.| +++.|. |.|++..
T Consensus 381 ~p~~~~~v~l~~~~~~~~~~~~~~~~~~~~~t~~~G~~~~~~-~~~~~~~~~~l~v~~ 437 (1676)
T 3cu7_A 381 QLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVL-NLPSGVTVLEFNVKT 437 (1676)
T ss_dssp CBCCSCEEEEEEEEEETTSCEEECCCEEEECCSSSCEEEEEE-CCCTTEEEEEEEEEE
T ss_pred CccCcceEEEeccccccccccccccccceeEECCCCeEEEEE-ECCCCCeEEEEEEEE
Confidence 999999998832 11 35789999 5666 455554 6777764
No 57
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=94.95 E-value=0.027 Score=60.28 Aligned_cols=48 Identities=31% Similarity=0.511 Sum_probs=41.2
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----ccee-------------------eeEeCCCceEEECccCCccEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGHE-------------------RSITDRDGYYKLDQVTSNRYTI 322 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~~-------------------~~~TD~dG~f~l~~L~pG~Ytv 322 (1150)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|.+
T Consensus 78 i~l~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 149 (238)
T 3t63_M 78 IIVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPAPW 149 (238)
T ss_dssp EEEEEEEEETTSCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcCccC
Confidence 4589999999999999999998 2311 1489999999999999999987
No 58
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=94.83 E-value=0.033 Score=60.29 Aligned_cols=51 Identities=24% Similarity=0.386 Sum_probs=42.2
Q ss_pred EEEeeEcCCCCccCCcEEEEEeC--CC------------ceeEEEeeCCCceEEecCCCCCcEEEE
Q 001120 897 ATGTITLLSGQPKDGVSVEARSE--SK------------GYYEETVTDTSGSYRLRGLHPDTTYVI 948 (1150)
Q Consensus 897 ~~G~v~~~~g~p~~gv~v~~~~~--~~------------~~~~~~~Td~~G~~~i~gL~Pg~~y~i 948 (1150)
+.|+|.+.+|+|++||.||+--- ++ ..+....||++|.|+++-+.||+ |.|
T Consensus 105 l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~-Y~~ 169 (254)
T 2boy_A 105 FRGEVVDQEGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAP-YEI 169 (254)
T ss_dssp EEEEEECTTSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCC-EEC
T ss_pred EEEEEECCCCCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCcc-ccC
Confidence 48999999999999999999622 12 23678999999999999999997 553
No 59
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=94.76 E-value=0.051 Score=60.47 Aligned_cols=53 Identities=30% Similarity=0.497 Sum_probs=43.5
Q ss_pred eEEEEEEeecCCccccCCCCCCcceEEEEEeCC--Cce------------EEEEEeCCCceEEEccccCccEEEE
Q 001120 76 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--GDL------------ISSVITSSEGSYLFKNIIPGKYKLR 136 (1150)
Q Consensus 76 ~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~--g~~------------i~~ttTd~~G~f~f~~L~pG~Y~l~ 136 (1150)
.+.|+|.+. +|+|++||.|+++..+ |.+ -....||++|+|+|.-+.||.|.+-
T Consensus 134 ~v~G~V~D~--------~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~~p 200 (311)
T 2azq_A 134 FLQGQVFDA--------NGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGCD 200 (311)
T ss_dssp EEEEEEECS--------SSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEECC
T ss_pred EEEEEEEcC--------CCCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcCCC
Confidence 478999985 4699999999999665 421 2367899999999999999999864
No 60
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=94.73 E-value=0.032 Score=61.49 Aligned_cols=49 Identities=31% Similarity=0.401 Sum_probs=41.8
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----ccee--------------eeEeCCCceEEECccCCccEEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTIE 323 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~~--------------~~~TD~dG~f~l~~L~pG~Ytv~ 323 (1150)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|+|.-+.||.|.+-
T Consensus 130 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~p 197 (290)
T 3n9t_A 130 ALVYGRVLDVQGRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPIP 197 (290)
T ss_dssp EEEEEEEEETTSCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCCC
Confidence 4589999999999999999998 3321 24899999999999999999873
No 61
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=94.71 E-value=0.022 Score=54.02 Aligned_cols=60 Identities=15% Similarity=0.234 Sum_probs=46.1
Q ss_pred eEEEEEEeecCCccccCCCCCCcceEEEEEeCCC---ceEEEEEeCCCceEE----EccccCccEEEEEEcCCc
Q 001120 76 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSG---DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 142 (1150)
Q Consensus 76 ~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g---~~i~~ttTd~~G~f~----f~~L~pG~Y~l~a~~~g~ 142 (1150)
.|+=.|++. +.|.|.+|+.|+|...++ +.+.+.+||+||+.. =..+.+|.|+|++....|
T Consensus 5 ~lstHVLDt-------~~G~PAagv~V~L~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 71 (114)
T 2g2n_A 5 ILSVHILNQ-------QTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDY 71 (114)
T ss_dssp CEEEEEEET-------TTTEECCSCEEEEEEECSSSEEEEEEEECCTTSEESCCSCSSCCCSEEEEEEECHHHH
T ss_pred CeEEEEecC-------CCcCCCCCCEEEEEEeCCCCcEEEEEEecCCCCccccccCCCCCCceEEEEEEEhhHh
Confidence 367788875 268999999999987554 468899999999972 224678999999865444
No 62
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=94.64 E-value=0.024 Score=59.71 Aligned_cols=48 Identities=17% Similarity=0.309 Sum_probs=40.3
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----cce-------------------eeeEe-CCCceEEECccCCccEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGH-------------------ERSIT-DRDGYYKLDQVTSNRYTI 322 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~-------------------~~~~T-D~dG~f~l~~L~pG~Ytv 322 (1150)
..|.|+|+|.+|+||+||.|.+ +|. -...| |++|+|+|.-+.||.|..
T Consensus 53 l~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~yp~ 125 (209)
T 2bum_A 53 IRLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVPG 125 (209)
T ss_dssp EEEEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCCBC
T ss_pred EEEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCcccC
Confidence 4689999999999999999999 331 12467 999999999999999874
No 63
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=94.63 E-value=0.029 Score=58.63 Aligned_cols=49 Identities=27% Similarity=0.268 Sum_probs=41.6
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----ccee--------------eeEeCCC-ceEEECccCCccEEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRD-GYYKLDQVTSNRYTIE 323 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~~--------------~~~TD~d-G~f~l~~L~pG~Ytv~ 323 (1150)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++ |+|+|.-+.||.|...
T Consensus 49 l~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~~ 117 (200)
T 3t63_A 49 ILLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNNA 117 (200)
T ss_dssp EEEEECEECTTSCBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEECT
T ss_pred EEEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCCC
Confidence 4689999999999999999998 3321 2489999 9999999999999863
No 64
>3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B
Probab=94.61 E-value=2.2 Score=47.87 Aligned_cols=136 Identities=18% Similarity=0.287 Sum_probs=72.0
Q ss_pred CCccCCcEEEEEeCCC--ceeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCCCcceeccCCceEEEEecCccceeceE
Q 001120 906 GQPKDGVSVEARSESK--GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDF 983 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~~--~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d~~~~~f 983 (1150)
+.++.+-.|+....+. ...+.......-.|.|.||.||+.|.+++.+....| ...|..........-..++.+
T Consensus 121 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g-----~s~~s~~~~~t~~~~p~~l~~ 195 (375)
T 3t1w_A 121 SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYDISVITLINGG-----ESAPTTLTQQTAVPPPTDLRF 195 (375)
T ss_dssp CTTEEEEEEEEEESSSCCSCEEEEECTTCCEEEEECCCTTCEEEEEEEEEETTE-----ECCCEEEEEECCCCCCEEEEE
T ss_pred CCCceEEEEEEEECCCCCceeEEEcCCCcceEEEeCCCCCCEEEEEEEEEeCCc-----ccCCeeeeeecCCCCCceeEE
Confidence 3456666777665432 233445555677899999999999999999754322 222333333222222333333
Q ss_pred EEEecCCcEEEEEEEEeccccccccceEEEEEecCCCCceEEEEeeC-CceeEEeecCCCC-cEEEEEEe
Q 001120 984 LVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLP-MSNFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 984 ~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~v~~~~~~~-~~~~f~~~~l~~~-~y~v~l~s 1051 (1150)
.... ...+.|+ =.... ...+....|+.+.......... ..++ ....+.+..|.++ .|.+++..
T Consensus 196 ~~~~-~~si~l~--W~~p~-~~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A 260 (375)
T 3t1w_A 196 TNIG-PDTMRVT--WAPPP-SIDLTNFLVRYSPVKNEEDVAE-LSISPSDNAVVLTNLLPGTEYVVSVSS 260 (375)
T ss_dssp ESCC-SSCEEEE--EECCS-SCCCCEEEEEEEEGGGTTCCEE-EEECTTCCEEEECSCCTTCEEEEEEEE
T ss_pred Eecc-cCEEEEE--EcCCC-CCCccEEEEEEEeCCCCCCcEE-EEcCCCcCEEEeCCCCCCCEEEEEEEE
Confidence 2221 1222222 11111 1122345566655433333333 3333 3478999999999 58888875
No 65
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=94.57 E-value=0.035 Score=60.81 Aligned_cols=49 Identities=29% Similarity=0.561 Sum_probs=41.7
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----ccee--------------eeEeCCCceEEECccCCccEEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGHE--------------RSITDRDGYYKLDQVTSNRYTIE 323 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~~--------------~~~TD~dG~f~l~~L~pG~Ytv~ 323 (1150)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|.+-
T Consensus 132 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~p 199 (280)
T 3hhy_A 132 LVFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQIP 199 (280)
T ss_dssp EEEEEEEECTTSCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcCCC
Confidence 4589999999999999999998 3321 25899999999999999999864
No 66
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=94.54 E-value=7.3 Score=43.27 Aligned_cols=282 Identities=16% Similarity=0.182 Sum_probs=135.5
Q ss_pred EEEeCCCceEEeccCCCCceEEE--EEeCCCeEEee------e---ccceeEEee--eeeEEEEEEecCCCCCcccceEE
Q 001120 762 ETSTGADGSFIGGPLYDDITYNV--EASKPGYYLRQ------V---GPNSFSCQK--LSQISVRIYSKDDAGEPIPSVLL 828 (1150)
Q Consensus 762 ~~~Td~~G~f~~gpL~~~~~y~v--~a~k~gy~l~~------~---~~~~f~~~k--l~~i~v~v~~~~~~~~pl~gvll 828 (1150)
.......-.|.+..|.++..|.+ .|...+-.-.+ . .+..+.... -.+|.|+-.... +.++.+-.+
T Consensus 51 ~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~~~p~~l~~~~~~~~si~l~W~~p~--~~~~~~Y~v 128 (368)
T 1fnf_A 51 EVVHADQSSCTFDNLSPGLEYNVSVYTVKDDKESVPISDTIIPAVPPPTDLRFTNIGPDTMRVTWAPPP--SIDLTNFLV 128 (368)
T ss_dssp EEECTTCCEEECCCCCTTSCEEEEEEEEETTEECCCEEEEECCCCCCCEEEEEESCCSSCEEEEEECCT--TCCCSEEEE
T ss_pred EEecCCcCEEEECCCCCCCEEEEEEEEEcCCCccCceeeeecCCCcCCceeEEEEcCCCeEEEEeeCCC--CCCCcEEEE
Confidence 34555667899999998776655 44433211111 0 022333322 335555555432 345666666
Q ss_pred EEeCCCc---cccceeecCCceEEEeecCCcceE-Ee--ecccccccCC----------CceeEEecC--CceEEEEEEE
Q 001120 829 SLSGDDG---YRNNSVSWAGGSFHFDNLFPGNFY-LR--PLLKEYAFSP----------PAQAIELGS--GESREVIFQA 890 (1150)
Q Consensus 829 slsg~~~---~r~n~~t~~~G~~~f~~L~PG~Y~-~~--~~~key~~~p----------~~~~i~v~~--g~~~~v~~~~ 890 (1150)
.....++ .+.-.+....-.+.+.+|.||+.| ++ +.-..-.-.| .+..+.+.. .....|.|..
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~~~~~~P~~l~~~~~~~~sv~l~W~~ 208 (368)
T 1fnf_A 129 RYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQHESTPLRGRQKTGLDSPTGIDFSDITANSFTVHWIA 208 (368)
T ss_dssp EEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEESCCSSEEEEEEEC
T ss_pred EEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCCCCCCeEeeecCCCCCCCccEEEEccCCEEEEEEeC
Confidence 5443211 111123445678999999999855 44 3322111111 111122221 1222333322
Q ss_pred EeeeEeEEEeeEcCCCCccCCcEEEEEeCC--CceeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCCCcceeccCCce
Q 001120 891 TRVAYSATGTITLLSGQPKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPES 968 (1150)
Q Consensus 891 ~r~~~s~~G~v~~~~g~p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~ 968 (1150)
++ .++.+-.|+....+ +...........-.|.|.||.||+.|.+++.+....|. ..+..
T Consensus 209 -------------p~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~-----~~~~~ 269 (368)
T 1fnf_A 209 -------------PR-ATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVALNGREE-----SPLLI 269 (368)
T ss_dssp -------------CS-SCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEEEETTEE-----CCCEE
T ss_pred -------------CC-CCcCEEEEEEecCCCCCCccEEEeCCCcCEEEECCCCCCCEEEEEEEEEeCCcc-----CCccc
Confidence 11 24555666655432 22333344445678999999999999999998643221 11111
Q ss_pred EEEEecCccceeceEEEEecCCcEEEEEEEEeccccccccceEEEEEecCCCCceEEEEee-CCceeEEeecCCCC-cEE
Q 001120 969 VTVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISL-PMSNFFQVKDLPKG-KHL 1046 (1150)
Q Consensus 969 ~~v~v~~~d~~~~~f~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~v~~~~~~-~~~~~f~~~~l~~~-~y~ 1046 (1150)
......+.--.++...... ...+.|+ =.... .-.....|+.+.......... ..+ .....|.+..|.+| .|.
T Consensus 270 ~~~~t~p~~P~~l~~~~~~-~~sv~l~--W~~p~--~~i~~Y~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~p~t~Y~ 343 (368)
T 1fnf_A 270 GQQSTVSDVPRDLEVVAAT-PTSLLIS--WDAPA--VTVRYYRITYGETGGNSPVQE-FTVPGSKSTATISGLKPGVDYT 343 (368)
T ss_dssp EEEECCCCSCEEEEEEEEE-TTEEEEE--EECCS--SCCSEEEEEEEETTCCSCCEE-EEEETTCCEEEECSCCTTCCEE
T ss_pred ccccCCCCCCCeeEEEecC-CCEEEEE--eeCCC--CccceEEEEEEECCCCCccEE-EEcCCCeeEEEecCCCCCCEEE
Confidence 1111111111333333321 1222122 11111 113355566655433333333 233 34567899999999 588
Q ss_pred EEEEecCCCcceeeeeeeEEEEEE
Q 001120 1047 LQLRSSLPSSTHRFESEIIEVDLE 1070 (1150)
Q Consensus 1047 v~l~s~l~~~~~~~~~~~~~v~~~ 1070 (1150)
+++...-..-.-.+.+..+.+.|+
T Consensus 344 ~~V~A~~~~G~g~~s~~~~~i~~~ 367 (368)
T 1fnf_A 344 ITVYAVTGRGDSPASSKPISINYR 367 (368)
T ss_dssp EEEEEECCCSSSCCBCCCEEEEEC
T ss_pred EEEEEeCCCCcCcccCceeeeeee
Confidence 888764332222344455555553
No 67
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=94.51 E-value=0.058 Score=59.98 Aligned_cols=68 Identities=9% Similarity=0.217 Sum_probs=46.6
Q ss_pred EEEEEEEe-CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccCCeeEEEE
Q 001120 171 EIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELV 238 (1150)
Q Consensus 171 ~i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~LppG~Y~v~ 238 (1150)
.+.|+|++ +|+||+||.|.++..+..-....+................||++|+|.|..+.||.|.+-
T Consensus 135 ~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~p 203 (311)
T 1dmh_A 135 ILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGCP 203 (311)
T ss_dssp EEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEEcCCCCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccCC
Confidence 57899996 699999999999987532111100000000112236788999999999999999999863
No 68
>3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii}
Probab=94.44 E-value=0.031 Score=62.15 Aligned_cols=64 Identities=17% Similarity=0.274 Sum_probs=47.3
Q ss_pred CCCCcceEEEEEeCCCc------------eE-----EEEEeCCCceEEEccc-----------------cCccEEEEEEc
Q 001120 94 GGGPSNVNVELLSHSGD------------LI-----SSVITSSEGSYLFKNI-----------------IPGKYKLRASH 139 (1150)
Q Consensus 94 g~plaGv~V~L~~~~g~------------~i-----~~ttTd~~G~f~f~~L-----------------~pG~Y~l~a~~ 139 (1150)
..+|+||.|+|++..+. ++ ...+||++|.+.|.+| ++|.|.|.+.+
T Consensus 175 ~~~L~GA~F~L~~~~~~~~~~~~~~~~g~~i~~~~~~~~tTd~~G~~~~~gL~~~d~~~~~~~~~~~~~~~~~Y~l~Etk 254 (290)
T 3qdh_A 175 KAGLQGAQFQLYKAKNAYAGTCTKDKEGDPIAINGETTLTTDAQGAINVKGLFISDSIDGANRDNQKDATARCYVLVETK 254 (290)
T ss_dssp --CCTTCEEEEEEESSTTCSSCCSCEESSCCCBTTBSSEECCTTSEEEEEEEEEEESCCCTTSSCCTTCSEEEEEEEEEE
T ss_pred CcccCCCEEEEEECCCcccceeeccccCceEecCCceEEEECCCCEEEEeCcccccccccccccccccCCCceEEEEEcc
Confidence 47999999999986542 22 3578999999999999 67999999865
Q ss_pred --CCceEEeec---cEEEEEcccc
Q 001120 140 --PNLSVEVRG---STEVELGFEN 158 (1150)
Q Consensus 140 --~g~~~~~~~---~~~V~v~~~~ 158 (1150)
.||.+. .. ..+|+|..+.
T Consensus 255 AP~GY~l~-~~~~~~~~~~v~~~~ 277 (290)
T 3qdh_A 255 APAGYVLP-AGDGAVTPVKIEVGA 277 (290)
T ss_dssp CCTTBCCC-CGGGGEEEEEEEC--
T ss_pred CCCCeEcC-cCcCCceeEEEECCC
Confidence 489876 33 4677776553
No 69
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=94.40 E-value=0.048 Score=59.13 Aligned_cols=51 Identities=29% Similarity=0.459 Sum_probs=42.8
Q ss_pred EEEeeEcCCCCccCCcEEEEEe--CCC------------ceeEEEeeCCCceEEecCCCCCcEEEE
Q 001120 897 ATGTITLLSGQPKDGVSVEARS--ESK------------GYYEETVTDTSGSYRLRGLHPDTTYVI 948 (1150)
Q Consensus 897 ~~G~v~~~~g~p~~gv~v~~~~--~~~------------~~~~~~~Td~~G~~~i~gL~Pg~~y~i 948 (1150)
+.|+|.+.+|+|++||.||+-- .++ ..++...||++|+|+++-+.||+ |-|
T Consensus 102 v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~-Ypi 166 (260)
T 3th1_A 102 IRGTVRSDTGELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVP-YQI 166 (260)
T ss_dssp EEEEEEETTSCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCC-EEC
T ss_pred EEEEEECCCCCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCC-CCC
Confidence 5899999999999999999852 111 35789999999999999999998 543
No 70
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=94.40 E-value=0.058 Score=56.40 Aligned_cols=66 Identities=12% Similarity=0.122 Sum_probs=46.4
Q ss_pred EEEEEEEe-CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCC-ceEEECccCCeeEEEE
Q 001120 171 EIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDAD-GKFMFKSVPCGQYELV 238 (1150)
Q Consensus 171 ~i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~-G~f~f~~LppG~Y~v~ 238 (1150)
.+.|+|++ +|+||+||.|.++..+..-....+...+ + .....+...||++ |+|.|..+.||.|...
T Consensus 50 ~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~-~-~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~~ 117 (200)
T 3t63_A 50 LLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLE-N-AFNSFGRTATTFDAGEWTLHTVKPGVVNNA 117 (200)
T ss_dssp EEEECEECTTSCBCSSCEEEEEECCTTSCCCCBCCTT-S-SBCSEEEEECCSSCCSEEEEEECCCCEECT
T ss_pred EEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCC-C-CccccceEecCCCCCEEEEEEECCcCcCCC
Confidence 57899996 6999999999999875321111111100 0 1123678899999 9999999999999763
No 71
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=94.37 E-value=0.026 Score=53.68 Aligned_cols=59 Identities=24% Similarity=0.353 Sum_probs=45.1
Q ss_pred EEEEEEeecCCccccCCCCCCcceEEEEEeCC--C--ceEEEEEeCCCceEE----EccccCccEEEEEEcCCc
Q 001120 77 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G--DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 142 (1150)
Q Consensus 77 IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~--g--~~i~~ttTd~~G~f~----f~~L~pG~Y~l~a~~~g~ 142 (1150)
|+=.|++. +.|.|.+|+.|+|...+ + +.+.+.+||+||+.. -..+.+|.|+|++....|
T Consensus 3 lstHVLDt-------~~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 69 (115)
T 1f86_A 3 LMVKVLDA-------VRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 69 (115)
T ss_dssp EEEEEEET-------TTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred eeEEEccC-------CCCCcCCCCEEEEEEcCCCCCcEEEEEeecCCCccccCcCCCCCCcceEEEEEEEhhHh
Confidence 56678775 26899999999998743 3 468899999999983 234678999999865444
No 72
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=94.35 E-value=0.092 Score=46.57 Aligned_cols=51 Identities=22% Similarity=0.109 Sum_probs=41.5
Q ss_pred EEEEEEeCCCccccCeEEEE---ccee-----eeEeCCCceEEECccCCccEEEEEEecc
Q 001120 277 VGGRVVDENDMGVEGVKILV---DGHE-----RSITDRDGYYKLDQVTSNRYTIEAVKVH 328 (1150)
Q Consensus 277 V~G~V~d~~G~plaGA~V~l---~G~~-----~~~TD~dG~f~l~~L~pG~Ytv~~~~~~ 328 (1150)
+.-+|+|.+|+|++||.|.+ |-.+ ...||++|.+.| -.--|+-.|.+.+++
T Consensus 3 ~~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~-~~G~Gd~~v~A~k~G 61 (82)
T 3e8v_A 3 GSVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASL-TAGKGDMLVWASKDG 61 (82)
T ss_dssp EEEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEE-ECCSEEEEEEEEETT
T ss_pred EEEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEE-EEcCCceEEEeccCC
Confidence 44489999999999999988 4322 248999999999 566788999998887
No 73
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=94.23 E-value=0.055 Score=58.16 Aligned_cols=69 Identities=20% Similarity=0.267 Sum_probs=50.4
Q ss_pred EEEeeEcCCCCccCCcEEEEEeC--CCc-----------------eeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCC
Q 001120 897 ATGTITLLSGQPKDGVSVEARSE--SKG-----------------YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFG 957 (1150)
Q Consensus 897 ~~G~v~~~~g~p~~gv~v~~~~~--~~~-----------------~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~ 957 (1150)
+.|+|.+.+|+|++||.||+--- ++. .++...||++|.|+++-+.||+ |.+.. +
T Consensus 81 v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~-Yp~~~------~ 153 (241)
T 2bum_B 81 VHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGP-YPWRN------R 153 (241)
T ss_dssp EEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCC-EEESS------S
T ss_pred EEEEEECCCCCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCc-cccCC------C
Confidence 38999999999999999998521 121 3577899999999999999997 66421 1
Q ss_pred CcceeccCCceEEEEecC
Q 001120 958 STKIERASPESVTVKVGS 975 (1150)
Q Consensus 958 ~~~i~~~~p~~~~v~v~~ 975 (1150)
.+-- -|.|+.+.|-.
T Consensus 154 -~~~~--RpaHIH~~V~a 168 (241)
T 2bum_B 154 -INEW--RPAHIHFSLIA 168 (241)
T ss_dssp -TTEE--ECSEEEEEEEC
T ss_pred -CCCC--cCceEEEEEeC
Confidence 1111 36788777753
No 74
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=94.23 E-value=0.054 Score=59.74 Aligned_cols=66 Identities=23% Similarity=0.304 Sum_probs=46.8
Q ss_pred EEEEEEEe-CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccCCeeEEEEE
Q 001120 171 EIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVP 239 (1150)
Q Consensus 171 ~i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~LppG~Y~v~~ 239 (1150)
.+.|+|++ +|+||+||.|.++..+..-....+ .+.. +........||++|+|.|..+.||.|.+-.
T Consensus 135 ~v~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~--~~~~-~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~p~ 201 (293)
T 1tmx_A 135 WVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQ--YDDD-RTAARAHLLSGPDGGYAFWAITPTPYPIPH 201 (293)
T ss_dssp EEEEEEEETTSCBCTTCEEEEECCCTTSCCGGG--SSSC-CCCSEEEEECCTTSEEEEEEECCCCEECCC
T ss_pred EEEEEEECCCCCCCCCceeEEEecCCCCcccCC--ccCC-CCCceeEEEeCCCceEEEEEECCCcccCCC
Confidence 46899996 699999999999987532110000 0011 122367889999999999999999998643
No 75
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=94.22 E-value=0.069 Score=58.45 Aligned_cols=66 Identities=17% Similarity=0.295 Sum_probs=46.5
Q ss_pred EEEEEEEe-CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccCCeeEEEE
Q 001120 171 EIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELV 238 (1150)
Q Consensus 171 ~i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~LppG~Y~v~ 238 (1150)
.+.|+|.+ +|+||+||.|.++..+..-........ .+ .....+...||++|+|.|..+.||.|.+-
T Consensus 133 ~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~-~~-~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~p 199 (280)
T 3hhy_A 133 VFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPH-LP-EWNLRGTIIADEEGRYEITTIQPAPYQIP 199 (280)
T ss_dssp EEEEEEECTTSCBCSSCEEEEECCCTTSCCTTSSTT-SC-TTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEECCCCCCCCCcEEEEEecCCCCCCCCCCCC-CC-CCcceEEEEeCCCceEEEEEECCcCcCCC
Confidence 57899996 699999999999977532111100000 01 11236788999999999999999999764
No 76
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=94.22 E-value=4.3 Score=49.84 Aligned_cols=212 Identities=19% Similarity=0.166 Sum_probs=106.0
Q ss_pred eEEEEEeCCCceEEEEE-e-CCCceEEEccc-cCccEEEEEEcCC----c--eEEe----eccEEEEEcccceeeeeeee
Q 001120 100 VNVELLSHSGDLISSVI-T-SSEGSYLFKNI-IPGKYKLRASHPN----L--SVEV----RGSTEVELGFENGEVDDIFF 166 (1150)
Q Consensus 100 v~V~L~~~~g~~i~~tt-T-d~~G~f~f~~L-~pG~Y~l~a~~~g----~--~~~~----~~~~~V~v~~~~~~~~~~l~ 166 (1150)
++|+|.+++|..+.... + +-.+.|.+..- +.|.|+|++...+ + .+.+ .++..|.+..... .+.
T Consensus 139 ~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~~~~~~~~~~F~Veeyv~P~feV~~~~~~~----~~~ 214 (627)
T 3hrz_A 139 VIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEHSPENYTAYFDVRKYVLPSFEVRLQPSEK----FFY 214 (627)
T ss_dssp EEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEETTCSCCEEEEEEECCCCCCSEEEEEEESSS----EEE
T ss_pred EEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEECCCceEEEEEEEEeEEECCcEEEEEecCcc----eEE
Confidence 67888999997665422 2 23566666644 5699999987543 1 1222 2334554432211 111
Q ss_pred ec-CcEEEEEEEe---CCcceece-EEEEEE--CCCCcccCCCCCCCcccccceeeEEEeCCCceEEECcc---------
Q 001120 167 AP-GYEIRGLVVA---QGNPILGV-HIYLYS--DDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSV--------- 230 (1150)
Q Consensus 167 i~-g~~i~G~V~~---~G~Pl~Ga-~V~L~~--~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~L--------- 230 (1150)
+. +-.+..+|.+ -|+|+.|. .+.+.. .+.....| .........|..|.|.|..-
T Consensus 215 ~~~~~~~~~~v~a~y~~G~Pv~G~v~v~~~~~~~~~~~~~~----------~~~~~~~~~~G~g~~~l~~~~~~~~~~~~ 284 (627)
T 3hrz_A 215 IDGNENFHVSITARYLYGEEVEGVAFVLFGVKIDDAKKSIP----------DSLTRIPIIDGDGKATLKRDTFRSRFPNL 284 (627)
T ss_dssp TTCCCCEEEEEEEEETTSCBCCEEEEEEEEEEETTEEEECG----------GGCEEEEEBTTEEEEEECHHHHHHHCCCG
T ss_pred ecCCCEEEEEEEEEECCCCEeccEEEEEEEEccCCceeecc----------chheeEEecCCeEEEEEEHHHhhhhhcch
Confidence 22 4455556653 59999983 333321 11000000 00012345677888876521
Q ss_pred ---CCeeEEEEEEEe-cCCeEEEecCceEEEEEeccceeee----ccEEEec--eEEEEEEEeCCCccccCeEEEE-cce
Q 001120 231 ---PCGQYELVPHYK-GENTVFDVSPSLVSMSVRHQHVTVP----EKFQVTG--FSVGGRVVDENDMGVEGVKILV-DGH 299 (1150)
Q Consensus 231 ---ppG~Y~v~~~~~-~~~~~~~~~P~~~~vtV~~~~~~l~----~~f~~~g--~sV~G~V~d~~G~plaGA~V~l-~G~ 299 (1150)
-...+.|.+.-. .+......+ ....+.+......+. ..+-.+| +.+.-+|.+.+|.|+++..|.+ .+.
T Consensus 285 ~~~~~~~l~v~a~V~~e~gt~~~~~-~~~~i~i~~~~~~i~f~~~~~~~kpG~p~~~~v~v~~~dg~P~~~~~V~v~~~~ 363 (627)
T 3hrz_A 285 NELVGHTLYASVTVMTESGSDMVVT-EQSGIHIVASPYQIHFTKTPKYFKPGMPYELTVYVTNPDGSPAAHVPVVSEAFH 363 (627)
T ss_dssp GGGTTCEEEEEEEEEETTSSCEEEE-EEEEEEEESSSCEEECTTSCSEECTTSCEEEEEEEECTTSCBCTTCEEEEGGGT
T ss_pred hhhcCcEEEEEEEEEEecCCeEEEc-ccceEEEEeecEEEEEEeccccccCCCcEEEEEEEECCCCCcCCCceEEEEcCc
Confidence 122455555322 111111100 001122221111110 1122344 4455566788999999999998 344
Q ss_pred eeeEeCCCceEEEC-ccCC--ccEEEEEEe
Q 001120 300 ERSITDRDGYYKLD-QVTS--NRYTIEAVK 326 (1150)
Q Consensus 300 ~~~~TD~dG~f~l~-~L~p--G~Ytv~~~~ 326 (1150)
...+||++|...|. +.+. +.++|++..
T Consensus 364 ~~~~td~~G~a~f~i~t~~~~~~l~i~~~~ 393 (627)
T 3hrz_A 364 SMGTTLSDGTAKLILNIPLNAQSLPITVRT 393 (627)
T ss_dssp EEEECCTTSEEEEEECCCTTCSEEEEEEEE
T ss_pred ceeEECCCCeEEEEEECCCCCcEEEEEEEe
Confidence 45689999976553 2332 457777654
No 77
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=94.18 E-value=0.11 Score=55.65 Aligned_cols=68 Identities=18% Similarity=0.265 Sum_probs=46.8
Q ss_pred EEEEEEEe-CCcceeceEEEEEECCCCcccCCC-CCCCcccc--cceeeEEEeCCCceEEECccCCeeEEEE
Q 001120 171 EIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQ-GSGNALGE--RKALCHAVSDADGKFMFKSVPCGQYELV 238 (1150)
Q Consensus 171 ~i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~-g~~~~~~~--g~~~~~a~TDa~G~f~f~~LppG~Y~v~ 238 (1150)
.+.|+|++ +|+||+||.|.++..+..-....+ .....+.+ ....+...||++|+|.|..+.||.|.+-
T Consensus 79 ~l~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~p 150 (238)
T 3t63_M 79 IVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPAPWR 150 (238)
T ss_dssp EEEEEEEETTSCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEES
T ss_pred EEEEEEECCCCCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcCccCC
Confidence 57899996 699999999999987532111100 00001111 1235778999999999999999999873
No 78
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=94.12 E-value=0.023 Score=54.46 Aligned_cols=60 Identities=17% Similarity=0.308 Sum_probs=47.3
Q ss_pred eEEEEEEeecCCccccCCCCCCcceEEEEEeCCCceEEEEEeCCCceE-----EEccccCccEEEEEEcCCc
Q 001120 76 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSY-----LFKNIIPGKYKLRASHPNL 142 (1150)
Q Consensus 76 ~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g~~i~~ttTd~~G~f-----~f~~L~pG~Y~l~a~~~g~ 142 (1150)
.|+=.|++. +.|.|.+|+.|+|...+.+.+.+.+||+||+. .=..+.+|.|+|++....|
T Consensus 10 ~lstHVLDt-------~~G~PAagv~V~L~~~~~~~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~tg~Y 74 (121)
T 2h0e_A 10 KLTTHILDL-------TCGKPAANVKIGLKRLGESIMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFHAGDY 74 (121)
T ss_dssp EEECCEEET-------TTTEECTTCEEEEEETTSCCCEEEECCTTSSCSSCSEEGGGCCSEEEEEEECHHHH
T ss_pred CeeEEEecC-------CCcCCCCCCEEEEEECCceEEEEEecCCCCCccCCcCCCCCcCceEEEEEEEhHHh
Confidence 467778875 26899999999999765667889999999997 2235778999999865444
No 79
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=94.12 E-value=0.08 Score=58.30 Aligned_cols=66 Identities=20% Similarity=0.239 Sum_probs=46.5
Q ss_pred EEEEEEEe-CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccCCeeEEEE
Q 001120 171 EIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELV 238 (1150)
Q Consensus 171 ~i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~LppG~Y~v~ 238 (1150)
.+.|+|.+ +|+||+||.|.++..+..-....+.. +.+ .....+...||++|+|.|..+.||.|.+-
T Consensus 131 ~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~-~~~-~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~p 197 (290)
T 3n9t_A 131 LVYGRVLDVQGRPVVGAVLDVWQTADNGMYSGQDP-DQP-FGNLRGRYRSDNDGCFAIQTTVPVCYPIP 197 (290)
T ss_dssp EEEEEEEETTSCBCSSCEEEEECCCTTSCCTTTST-TSC-TTTTEEEEECCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCC-CCC-CCCceeEEEeCCCceEEEEEeCCCCcCCC
Confidence 46899996 69999999999997753211110000 011 11236788999999999999999999874
No 80
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=94.09 E-value=6.6 Score=48.12 Aligned_cols=213 Identities=15% Similarity=0.119 Sum_probs=103.0
Q ss_pred eEEEEEeCCCceEE-EEEeCCCceEEEc-----cccCccEEEEEEcCC-----c--eEEe----eccEEEEEcccceeee
Q 001120 100 VNVELLSHSGDLIS-SVITSSEGSYLFK-----NIIPGKYKLRASHPN-----L--SVEV----RGSTEVELGFENGEVD 162 (1150)
Q Consensus 100 v~V~L~~~~g~~i~-~ttTd~~G~f~f~-----~L~pG~Y~l~a~~~g-----~--~~~~----~~~~~V~v~~~~~~~~ 162 (1150)
++|.+.+++|..+. ...+..+|.|.++ +.+.|.|+|.+...+ + .+.+ .+...|.+........
T Consensus 155 ~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~~~~~~~s~~F~VeeyvlP~feV~i~~~~~~~~ 234 (656)
T 4fxk_A 155 ITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFSDGLESNSSTQFEVKKYVLPNFEVKITPGKPYIL 234 (656)
T ss_dssp EEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEESSCTTCCCCEEEEECCCCCCSEEEEEEESSSSCC
T ss_pred ceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEcCCCceeEEEEEEEEEEecCcEEEEEecCcceee
Confidence 67888999996553 3455678988765 345699999986432 1 1322 2345555543221100
Q ss_pred eeeeecCcEEEEEEEe---CCcceec-eEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECc---------
Q 001120 163 DIFFAPGYEIRGLVVA---QGNPILG-VHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKS--------- 229 (1150)
Q Consensus 163 ~~l~i~g~~i~G~V~~---~G~Pl~G-a~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~--------- 229 (1150)
.....+-.+..+|.. -|+|++| +.+......... ............++.+|...+.-
T Consensus 235 -~~~~~~~~~~v~v~a~Y~~G~PV~G~~~v~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 304 (656)
T 4fxk_A 235 -TVPGHLDEMQLDIQARYIYGKPVQGVAYVRFGLLDEDG---------KKTFFRGLESQTKLVNGQSHISLSKAEFQDAL 304 (656)
T ss_dssp -EETTEECCCEEEEEEEETTCCCCCSEEEEEEEECCTTS---------CCEEEEEEEEEEECSSSEEEEECCHHHHHHHH
T ss_pred -eccCCCCeEEEEEEEEEccCccEeeEEEEEEEEecCCC---------CccccccccccEEeecCEEEEEECHHHhhhhh
Confidence 000012233444543 5999998 455443321100 00000112345667788776641
Q ss_pred ---------cCCeeEEEEEEEe---cCCeE------EEecCceEEEEEeccceeeeccEEEec--eEEEEEEEeCCCccc
Q 001120 230 ---------VPCGQYELVPHYK---GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDENDMGV 289 (1150)
Q Consensus 230 ---------LppG~Y~v~~~~~---~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~G~pl 289 (1150)
..+..+.+.+.-. +.... +.+.+....+...... . +-.+| +.+.-.+.+.+|+|+
T Consensus 305 ~~~~~~~~~~~~~~l~v~a~V~e~~g~~~~~~~~~~i~~~~~~~~i~~~~~~----~-~~kpg~p~~~~v~v~~~dG~P~ 379 (656)
T 4fxk_A 305 EKLNMGITDLQGLRLYVAAAIIESPGGEMEEAELTSWYFVSSPFSLDLSKTK----R-HLVPGAPFLLQALVREMSGSPA 379 (656)
T ss_dssp HHTSCCSSTTTTTCEECEEEEECCSSSCCCEEECCCEECCSSSSEEECCSSC----S-CCCTTSBCCEEEEEECSSSSCC
T ss_pred cccccccccccCceEEEEEEEEECCCCeEEEEEEEEEEEecccEEEEEeccC----C-eEcCCCcEEEEEEEECCCCCCC
Confidence 1122344444321 11110 1111112222211110 1 11123 345556778899999
Q ss_pred cCeEEEEcc--------ee----eeEeCCCceEEECccCC---ccEEEEEEec
Q 001120 290 EGVKILVDG--------HE----RSITDRDGYYKLDQVTS---NRYTIEAVKV 327 (1150)
Q Consensus 290 aGA~V~l~G--------~~----~~~TD~dG~f~l~~L~p---G~Ytv~~~~~ 327 (1150)
++..|.+.- .. ...+|.+|.+.+.-..| |.|.+++...
T Consensus 380 ~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~ 432 (656)
T 4fxk_A 380 SGIPVKVSATVSSPGSVPEVQDIQQNTDGSGQVSIPIIIPQTISELQLSVSAG 432 (656)
T ss_dssp CSCCEEEEEEEECGGGCEEEEEEEECCCTTSEEEECCBCCTTCSEEEEEEEES
T ss_pred CCceEEEEEEEeccceEEeeeEEEEEecCCceEEEEEeCCCCCcEEEEEEEeC
Confidence 998887711 01 13678888887753322 4566666543
No 81
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=94.03 E-value=0.035 Score=61.36 Aligned_cols=71 Identities=23% Similarity=0.310 Sum_probs=52.4
Q ss_pred EEEcccceeeeeeeeecCcEEEEEEEeC--------CcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCc
Q 001120 152 VELGFENGEVDDIFFAPGYEIRGLVVAQ--------GNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADG 223 (1150)
Q Consensus 152 V~v~~~~~~~~~~l~i~g~~i~G~V~~~--------G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G 223 (1150)
+.+..+...+.+...+.++.++|-|..+ ...-+|++|++...+ .+++||++|
T Consensus 140 ~~~~nG~V~V~~~~~~~~~~vsGYi~~~~~~~~~~~~~~~~G~~V~i~gt~--------------------~sa~tD~~G 199 (321)
T 3kcp_A 140 TDLINGGVLVTNKPVIEGYKVSGYILPDFSFDATVAPLVKAGFKVEIVGTE--------------------LYAVTDANG 199 (321)
T ss_dssp CEEECEEEEECCCCCCSSEEEEEEEEESSCCCTTTHHHHHSCCEEEETTSS--------------------CEEECCTTS
T ss_pred eEEECCEEEECCCCCCCCceEEEEEccccccccccchhccCCcEEEEEecc--------------------ceeEECCCc
Confidence 3344444445555666788999998842 345678888876542 699999999
Q ss_pred eEEECccCCee--EEEEEEEe
Q 001120 224 KFMFKSVPCGQ--YELVPHYK 242 (1150)
Q Consensus 224 ~f~f~~LppG~--Y~v~~~~~ 242 (1150)
.|++.++|+|. |+|....+
T Consensus 200 ~f~I~~vp~~~~~ytl~i~~~ 220 (321)
T 3kcp_A 200 YFEITGVPANASGYTLKISRA 220 (321)
T ss_dssp EEEEEEECCEEEEEEEEEECT
T ss_pred eEEEeccCCCCccEEEEEeec
Confidence 99999999998 99999643
No 82
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=93.96 E-value=0.27 Score=67.44 Aligned_cols=214 Identities=14% Similarity=0.155 Sum_probs=108.8
Q ss_pred eEEEEEeCCCceEEE--EE-eCCCceEEEc-----cccCccEEEEEEcCCceEEeeccEEEEEccc---ce--eee--ee
Q 001120 100 VNVELLSHSGDLISS--VI-TSSEGSYLFK-----NIIPGKYKLRASHPNLSVEVRGSTEVELGFE---NG--EVD--DI 164 (1150)
Q Consensus 100 v~V~L~~~~g~~i~~--tt-Td~~G~f~f~-----~L~pG~Y~l~a~~~g~~~~~~~~~~V~v~~~---~~--~~~--~~ 164 (1150)
++|+|.+++|..+.. .. ||..|.|.++ +.+.|.|.|++...+..-. ..+..|.|..= .. .+. ..
T Consensus 162 v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~-~~~~~F~VeEYvlP~feV~i~~~~~ 240 (1661)
T 2b39_A 162 VFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYEDSPQQ-VFSAEFEVKEYVLPSFEVQLEPEEK 240 (1661)
T ss_dssp EEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEETTEEEE-EEEEEEEECCCCCCSBCCEEECSSS
T ss_pred EEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEeecCCCc-eEEEEEEEEEccCCcEEEEEEcCcc
Confidence 789999999966543 23 4588877653 3366999999975431100 01123333210 00 010 11
Q ss_pred eeecC--cEEEEEEEe---CCcceeceEE-EEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEEC--ccC-----
Q 001120 165 FFAPG--YEIRGLVVA---QGNPILGVHI-YLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFK--SVP----- 231 (1150)
Q Consensus 165 l~i~g--~~i~G~V~~---~G~Pl~Ga~V-~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~--~Lp----- 231 (1150)
....+ -.+..+|.. .|.|++|... .+........ ...+ ........+|.+|+|.|. .++
T Consensus 241 ~~~~~~~~~~~v~v~a~Y~~G~Pv~G~~~v~~~~~~~~~~------~~~~--~~~~~~~~~dg~G~~~l~~~~~~~~~~~ 312 (1661)
T 2b39_A 241 FYYIDDPDGLKVNIIARFLYGEQVDGTAFVIFGVQDGDRR------ISLT--HSLTRVPINDGNGEAILKRQVLLNGVQP 312 (1661)
T ss_dssp SCCSSCSSCCCEEEECBBSSSCBCCEEEEEEEEEECSSCE------ECCG--GGCEEEEESSSCEEECCCTTTTSSSCTT
T ss_pred eEecCCCcEEEEEEEEEEcCCCceeeEEEEEEEEecCCcc------cccC--cceeeeEecCCeEEEEEehHHhhccccc
Confidence 11112 334555553 5999998643 2221110000 0000 001235678999999984 111
Q ss_pred -------CeeEEEEEEE-e--cCCeE------EEecCceEEEEEeccceeeeccEEEeceEEEE--EEEeCCCccccCeE
Q 001120 232 -------CGQYELVPHY-K--GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTGFSVGG--RVVDENDMGVEGVK 293 (1150)
Q Consensus 232 -------pG~Y~v~~~~-~--~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g~sV~G--~V~d~~G~plaGA~ 293 (1150)
.-.+.|.+.. . +.... +.+.+....+.+... ..+..+|....+ .+++.+|+|+++..
T Consensus 313 ~~~~~~~~~~~~v~a~V~e~~gg~~~~~~~~~i~i~~~~~~i~~~~~-----~~~~~~g~~~~~~v~~~~~dG~p~~~~~ 387 (1661)
T 2b39_A 313 SRADALVGKSIYVSATVILQSGSDMVEAERTGIPIVTSPYQIHFTKT-----PKFFKPAMPFDLMVYVTNPDGSPARHIP 387 (1661)
T ss_dssp CHHHHSSSCBCEEEEEEEETTTCCCCEECCCCCBCCSCSSBCCBSSC-----CSEECSSEEEECCBBCBBTTTBCCSSCC
T ss_pred CChhhccCcEEEEEEEEEEcCCceEEEeeeEEEEEEEeeEEEEEEeC-----CCccCCCCcEEEEEEEEcCCCCCcCCce
Confidence 1245555532 1 21111 112233222222111 112233443333 44677999999999
Q ss_pred EEE-cceeeeEeCCCc--eEEECccC--CccEEEEEEecc
Q 001120 294 ILV-DGHERSITDRDG--YYKLDQVT--SNRYTIEAVKVH 328 (1150)
Q Consensus 294 V~l-~G~~~~~TD~dG--~f~l~~L~--pG~Ytv~~~~~~ 328 (1150)
|.+ .+....+||++| .|.| +++ .|.|.|++....
T Consensus 388 v~v~~~~~~~~t~~~G~~~~~i-~~~~~~g~y~l~v~~~d 426 (1661)
T 2b39_A 388 VVTQGSNVQSLTQDDGVAKLSI-NTQNKRDPLTITVRTKK 426 (1661)
T ss_dssp EEETTCCCCCCCSSSCBCCCEE-EECSCCSCEEEEEEECC
T ss_pred EEEeccceEEEECCCCeEEEEE-ECCCCCcEEEEEEEEcC
Confidence 988 444446889999 5666 344 478999987643
No 83
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=93.95 E-value=0.051 Score=58.86 Aligned_cols=48 Identities=27% Similarity=0.447 Sum_probs=40.8
Q ss_pred eEEEEEEEeCCCccccCeEEEE-----ccee---------------eeEeCCCceEEECccCCccEEE
Q 001120 275 FSVGGRVVDENDMGVEGVKILV-----DGHE---------------RSITDRDGYYKLDQVTSNRYTI 322 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l-----~G~~---------------~~~TD~dG~f~l~~L~pG~Ytv 322 (1150)
..|.|+|+|.+|+||+||.|.+ +|.. ...||++|+|.|.-+.||.|-+
T Consensus 104 l~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 171 (257)
T 3o5u_A 104 MRFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEI 171 (257)
T ss_dssp EEEEEEEECTTCCBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEECCCCCCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcCC
Confidence 4589999999999999999998 2311 2489999999999999999975
No 84
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=93.93 E-value=2.9 Score=43.15 Aligned_cols=143 Identities=15% Similarity=0.146 Sum_probs=79.0
Q ss_pred eEEEEEEEeCCCccccCeEEEEcceeeeEeC-CCceEEECccCCccEEEEEEeccccccc----eeeEEEcCCcceeeeE
Q 001120 275 FSVGGRVVDENDMGVEGVKILVDGHERSITD-RDGYYKLDQVTSNRYTIEAVKVHYKFNK----LKEYMVLPNMASIADI 349 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l~G~~~~~TD-~dG~f~l~~L~pG~Ytv~~~~~~y~~~~----~~~v~v~p~~~~i~dI 349 (1150)
..|.+... .+ .++..++|.+||..+.... ..-.|.+..+++|.|+|++++-...-+. ...+.+..+.++...|
T Consensus 19 vtv~~~As-~d-~~V~~Ve~~~dg~~v~~~t~~~ys~~~~~~~~G~htlta~A~D~aGn~s~s~~v~vtV~~~~~Ptv~i 96 (190)
T 3pdd_A 19 INISATVK-SK-TPVSKVEFYNGDTLISSDTTAPYTAKITGAAVGAYNLKAVAVLSDGRRIESPVTPVLVKVIVKPTVKL 96 (190)
T ss_dssp EEEEEEEC-CS-SCEEEEEEEETTEEEEEECSSSEEEEECSCCSEEEEEEEEEEETTSCEEECCCEEEEEECCCCCEEEE
T ss_pred EEEEEEEe-CC-CCEEEEEEEECCEEEccccCCceEEEeccCCCccEEEEEEEEECCCCEeeecceeEEeccCCCCceee
Confidence 45666666 33 4899999999998875322 2235666678899999998764321111 1134444333222233
Q ss_pred EEe----------eeEEEEEEEEcCCcccEEEEEEcCCCcceeeeeeeCCCeEEEEE--EcCeeEEEEEEeecCCCCCce
Q 001120 350 KAI----------SYDICGVVRTVGSGNKVKVALTHGPDKVKPQVKQTDNNGNFCFE--VPPGEYRLSAMAATPESSSGI 417 (1150)
Q Consensus 350 ~~~----------~~~V~G~V~~~~~~~~a~Vtl~~g~~~~~~~~~~Td~dG~f~f~--L~pG~Y~l~~~~~~~~~~~G~ 417 (1150)
... ...|++...+.++ ...+|.+..+.. ..-++..+.|.+. .++|.|+|.+.+.+. .|-
T Consensus 97 tsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~~~dg~-----~v~t~t~~~y~~~~~~~~G~~tl~a~A~D~---aGn 167 (190)
T 3pdd_A 97 TAPKSNVVAYGNEFLKITATASDSDG-KISRVDFLVDGE-----VIGSDREAPYEYEWKAVEGNHEISVIAYDD---DDA 167 (190)
T ss_dssp EECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEEEETTE-----EEEEECSSSEEEEEECCSEEEEEEEEEEET---TCC
T ss_pred cCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEEEECCE-----EEecccCCCEEEEEecCCeeEEEEEEEEEC---CCC
Confidence 221 1245554443222 245666653221 1223445556665 588999999988764 332
Q ss_pred eeeCceEEEEE
Q 001120 418 LFLPPYADVVV 428 (1150)
Q Consensus 418 ~~~p~~~~V~V 428 (1150)
.-....+.|+|
T Consensus 168 ~s~s~~vtvtv 178 (190)
T 3pdd_A 168 ASTPDSVKIFV 178 (190)
T ss_dssp BCCCEEEEEEE
T ss_pred EEecceEEEEE
Confidence 22344555665
No 85
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=93.88 E-value=0.031 Score=53.41 Aligned_cols=59 Identities=19% Similarity=0.333 Sum_probs=45.1
Q ss_pred EEEEEEeecCCccccCCCCCCcceEEEEEeCC--C--ceEEEEEeCCCceEE----EccccCccEEEEEEcCCc
Q 001120 77 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G--DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 142 (1150)
Q Consensus 77 IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~--g--~~i~~ttTd~~G~f~----f~~L~pG~Y~l~a~~~g~ 142 (1150)
|+=.|++. +.|.|.+|+.|+|...+ + +.+.+.+||+||+.. =..+.+|.|+|++....|
T Consensus 4 lstHVLDt-------~~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Y 70 (119)
T 1oo2_A 4 LMVKILDA-------VKGTPAGSVALKVSQKTADGGWTQIATGVTDATGEIHNLITEQQFPAGVYRVEFDTKAY 70 (119)
T ss_dssp EEEEEEET-------TTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSCCTTCSCGGGCCSEEEEEEECHHHH
T ss_pred eeEEEecC-------CCcCCCCCCEEEEEEeCCCCCcEEEEEEecCCCCcccCcCCCCCCCceEEEEEEEhHHh
Confidence 66778775 26899999999998642 3 468899999999972 234678999999865444
No 86
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=93.85 E-value=0.037 Score=53.45 Aligned_cols=60 Identities=23% Similarity=0.381 Sum_probs=46.3
Q ss_pred eEEEEEEeecCCccccCCCCCCcceEEEEEeCC--C--ceEEEEEeCCCceEE----EccccCccEEEEEEcCCc
Q 001120 76 TLLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G--DLISSVITSSEGSYL----FKNIIPGKYKLRASHPNL 142 (1150)
Q Consensus 76 ~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~--g--~~i~~ttTd~~G~f~----f~~L~pG~Y~l~a~~~g~ 142 (1150)
.|+=.|++.. .|.|.+|+.|+|...+ + +.+.+.+||+||+.. -..+.+|.|+|++.-..|
T Consensus 11 ~LStHVLDt~-------~G~PAagv~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 78 (127)
T 2h4e_A 11 PLMVKVLDAV-------RGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 78 (127)
T ss_dssp CEEEEEEETT-------TTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred CEEEEEecCC-------CcCCCCCCEEEEEEeCCCCCeEEEEEeecCCCccccCcCCCCCccceEEEEEEEhHHh
Confidence 4777888752 6899999999998743 3 468899999999983 234678999999865444
No 87
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=93.74 E-value=0.087 Score=57.02 Aligned_cols=67 Identities=21% Similarity=0.220 Sum_probs=46.6
Q ss_pred EEEEEEEe-CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccCCeeEEEE
Q 001120 171 EIRGLVVA-QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELV 238 (1150)
Q Consensus 171 ~i~G~V~~-~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~LppG~Y~v~ 238 (1150)
.+.|+|.+ +|+||+||.|.++..+..-....... ..+......+...||++|+|.|..+.||.|-+-
T Consensus 105 ~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~-~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~p 172 (257)
T 3o5u_A 105 RFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSP-ALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEIP 172 (257)
T ss_dssp EEEEEEECTTCCBCTTCEEEEECCCTTSCCTTSCT-TSCSSCTTEEEECCCTTSEEEEEEECCCCEECC
T ss_pred EEEEEEECCCCCCCCCcEEEEEecCCCCCCCCcCC-CCCcccCceeEEEeCCCceEEEEEECCCCcCCC
Confidence 47899996 69999999999997753211110000 011102246788999999999999999999763
No 88
>3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X*
Probab=93.51 E-value=0.059 Score=63.29 Aligned_cols=65 Identities=14% Similarity=0.176 Sum_probs=50.3
Q ss_pred CCCCcceEEEEEeCCCce-------------EEEEEeCCCceEEEccc--------------------cCccEEEEEEc-
Q 001120 94 GGGPSNVNVELLSHSGDL-------------ISSVITSSEGSYLFKNI--------------------IPGKYKLRASH- 139 (1150)
Q Consensus 94 g~plaGv~V~L~~~~g~~-------------i~~ttTd~~G~f~f~~L--------------------~pG~Y~l~a~~- 139 (1150)
+.+|+||.|+|++.++.. ....+||++|.+.|.+| .+|.|.|.+++
T Consensus 320 ~~~L~GA~F~L~~~~~~~~~~~~~~~~~~~~~~~~tTd~~G~~~~~gL~~~~~~~~~~~~~~~~~~~~~~g~Y~lvETkA 399 (436)
T 3hr6_A 320 PGADRTATFQLHRCEADGSLVKSDPPISLDGKQEFVTGQDGKAVLSGIHLGTLQLESNVMKYTDAWAGKGTEFCLVETAT 399 (436)
T ss_dssp CCTTCCCEEEEEEECTTSCBCTTCCCCCBTTBCCEECCTTSEEEEEEEEEEEEEEETTEEEEEETTTTSCSEEEEEEEEC
T ss_pred CcccCCCEEEEEECCCCccccccCCceeeccceEEEeCCCcEEEEeCccccccccccccccccccccCCCCeEEEEEecC
Confidence 689999999999766421 13568999999999999 47999999875
Q ss_pred -CCceEEeeccEEEEEcccce
Q 001120 140 -PNLSVEVRGSTEVELGFENG 159 (1150)
Q Consensus 140 -~g~~~~~~~~~~V~v~~~~~ 159 (1150)
.||.+. ...+.|+|..++.
T Consensus 400 P~GY~l~-~~pi~fti~~~~~ 419 (436)
T 3hr6_A 400 ASGYELL-PKPVIVKLEANES 419 (436)
T ss_dssp CTTCBCC-SSCEEECCCCCTT
T ss_pred CCCcCcC-CCcEEEEEecCCc
Confidence 489876 3447788776554
No 89
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=93.48 E-value=4.2 Score=55.28 Aligned_cols=208 Identities=21% Similarity=0.219 Sum_probs=107.2
Q ss_pred eEEEEEeCCCceEEEEE-e-CCCceEEEccc-cCccEEEEEEcCCc------eEEe----eccEEEEEcccceeeeeeee
Q 001120 100 VNVELLSHSGDLISSVI-T-SSEGSYLFKNI-IPGKYKLRASHPNL------SVEV----RGSTEVELGFENGEVDDIFF 166 (1150)
Q Consensus 100 v~V~L~~~~g~~i~~tt-T-d~~G~f~f~~L-~pG~Y~l~a~~~g~------~~~~----~~~~~V~v~~~~~~~~~~l~ 166 (1150)
++|+|.+++|..+.... + +-.+.|.+..- +.|.|+|.+...+- .+.+ .++.+|.+..... .+.
T Consensus 161 ~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~~~~~~~~~~F~VeeYvlP~FeV~v~~~~~----~~~ 236 (1642)
T 3prx_B 161 VIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEHSPENYTAYFDVRKYVLPSFEVRLQPSEK----FFY 236 (1642)
T ss_dssp EEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEETTEEEEEEEEEEECSCCCCSEEEEEEESSS----EEE
T ss_pred EEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeCCCCcEEEEEEEEEEEecCcEEEEEeccce----eEE
Confidence 67788899986654432 2 24566666654 55999999875432 1211 2334444432211 111
Q ss_pred ec-CcEEEEEEEe---CCcceeceEEEEEE---CCCCcccCCCCCCCcccccceeeEEEeCCCceEEECcc------CC-
Q 001120 167 AP-GYEIRGLVVA---QGNPILGVHIYLYS---DDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSV------PC- 232 (1150)
Q Consensus 167 i~-g~~i~G~V~~---~G~Pl~Ga~V~L~~---~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~L------pp- 232 (1150)
+. +-.+...|.+ -|+|++|.....+. .+....-| ........+|.+|.|.|.-- +.
T Consensus 237 ~~~~~~~~v~V~ArY~yGkPV~G~v~v~fg~~~~~~~~~~~----------~~l~~~~~~dg~G~~~~~~~~~~~~~~~~ 306 (1642)
T 3prx_B 237 IDGNENFHVSITARYLYGEEVEGVAFVLFGVKIDDAKKSIP----------DSLTRIPIIDGDGKATLKRDTFRSRFPNL 306 (1642)
T ss_dssp TTSCCCEEEEEEEEETTSCBCCEEEEEEEEEEETTEEEECG----------GGCEEEEEBTTEEEEEECHHHHHHHCCCG
T ss_pred ecCCCeEEEEEEEEeCCCCceeeeEEEEEEeccCCCccccc----------cccceeEEecCcEEEEEehhhhccccccc
Confidence 22 3345556654 49999986333221 11000000 00123457899999997521 11
Q ss_pred -----eeEEEEEEEe---cCCeE------EEecCceEEEEEeccceeeeccEEEec--eEEEEEEEeCCCccccCeEEEE
Q 001120 233 -----GQYELVPHYK---GENTV------FDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDENDMGVEGVKILV 296 (1150)
Q Consensus 233 -----G~Y~v~~~~~---~~~~~------~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~G~plaGA~V~l 296 (1150)
..+.|.+.-. +.... ..+.+....+.+... ..+-.+| +.+.-+|.+++|.|+++..|.+
T Consensus 307 ~~~~~~~l~V~atV~eE~gg~~~~~~~~~i~i~~~~~~i~f~~~-----~~~~kpG~p~~~~v~v~~~dg~P~~~~~V~v 381 (1642)
T 3prx_B 307 NELVGHTLYASVTVMTESGSDMVVTEQSGIHIVASPYQIHFTKT-----PKYFKPGMPYELTVYVTNPDGSPAAHVPVVS 381 (1642)
T ss_dssp GGTSSEEEEEEEEEEETTSSCEEEEEEEEEEEESCSCEEECTTS-----CSEECTTSCEEEEEEEECTTSCBCCSCEEEE
T ss_pred ccccceEEEEEEEEEEeCCCCEEEeeeeeEEEEecceEEEEEeC-----ccccCCCCCEEEEEEEECCCCCCCCCceEEE
Confidence 1234443321 21111 112222222222211 1233345 4455566788999999999999
Q ss_pred -cceeeeEeCCCceEEEC-ccCC--ccEEEEEEe
Q 001120 297 -DGHERSITDRDGYYKLD-QVTS--NRYTIEAVK 326 (1150)
Q Consensus 297 -~G~~~~~TD~dG~f~l~-~L~p--G~Ytv~~~~ 326 (1150)
.+....+||++|...|. +.+. ..++|+++.
T Consensus 382 ~~~~~~~tTd~~G~a~f~i~t~~~~~~l~i~~~~ 415 (1642)
T 3prx_B 382 EAFHSMGTTLSDGTAKLILNIPLNAQSLPITVRT 415 (1642)
T ss_dssp GGGTEEEECCTTSEEEEEECCCTTCCCCEEEEEC
T ss_pred EeccceeeeCCCceEEEEEECCCCCcEEEEEEEE
Confidence 34444689999976553 2333 457777763
No 90
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=93.32 E-value=0.046 Score=54.34 Aligned_cols=28 Identities=21% Similarity=0.471 Sum_probs=25.4
Q ss_pred ceEEEEEeCCCceEEEccccCccEEEEE
Q 001120 110 DLISSVITSSEGSYLFKNIIPGKYKLRA 137 (1150)
Q Consensus 110 ~~i~~ttTd~~G~f~f~~L~pG~Y~l~a 137 (1150)
..+.++++|++|+|.|.+|+||+|.|.+
T Consensus 86 ~y~r~t~cD~~G~F~F~~Lp~G~Yyl~a 113 (150)
T 3qec_A 86 TYVREATTDQNGRFDFDHIPNGTYYISS 113 (150)
T ss_dssp GGCEEEECCTTSEEEEEEECSEEEEEEE
T ss_pred cceeEEEeCCCCcEEECCCCCccEEEEE
Confidence 3467899999999999999999999986
No 91
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=93.30 E-value=9.9 Score=40.46 Aligned_cols=192 Identities=12% Similarity=0.132 Sum_probs=97.2
Q ss_pred cCCceEEEeecCCcc-eEEe--ecccccccCCCceeEEecCCceEEEEEEEEeeeEeEEEeeE--cCCCCccCCcEEEEE
Q 001120 843 WAGGSFHFDNLFPGN-FYLR--PLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTIT--LLSGQPKDGVSVEAR 917 (1150)
Q Consensus 843 ~~~G~~~f~~L~PG~-Y~~~--~~~key~~~p~~~~i~v~~g~~~~v~~~~~r~~~s~~G~v~--~~~g~p~~gv~v~~~ 917 (1150)
...-.+.+.+|.||+ |.++ +.-..-.-.|....+....+.-..+.+.... ..++ .|+ ... .++.+-.|+..
T Consensus 65 ~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~-~~sv--~l~W~~p~-~~i~~Y~v~~~ 140 (283)
T 1tdq_A 65 PPLSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPKNLRVGSRT-ATSL--DLEWDNSE-AEAQEYKVVYS 140 (283)
T ss_dssp TTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEEEC-SSCE--EEEEECCS-SCCSEEEEEEE
T ss_pred CCCCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCCceEEEecC-CCeE--EEEecCCC-CCccEEEEEEE
Confidence 345678999999998 4454 3322212223333333344444444432211 1111 122 122 35667777776
Q ss_pred eCCCc-eeEEEeeCC---CceEEecCCCCCcEEEEEEEEecCCCCcceeccCCceEEEEecCccceeceEEEEecCCcEE
Q 001120 918 SESKG-YYEETVTDT---SGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFEQPEKTI 993 (1150)
Q Consensus 918 ~~~~~-~~~~~~Td~---~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d~~~~~f~~~~~~~~~~ 993 (1150)
..++. ......... .-.|.|.||.||..|.+++.+....| .+.|......-...-..++...... ...+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g-----~s~~~~~~~~t~~~~P~~l~~~~~~-~~sv~ 214 (283)
T 1tdq_A 141 TLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSK-----QSIPATMNARTELDSPRDLMVTASS-ETSIS 214 (283)
T ss_dssp ETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTE-----ECCCEEEEEECCCCCCEEEEEEEEC-SSCEE
T ss_pred eCCCCcceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCC-----CCcceEEEecCCCCCCCccEEeEec-CCEEE
Confidence 55432 223333333 67899999999999999999854221 2334333333223333444444332 22222
Q ss_pred EEEEEEeccccccccceEEEEEecCCCCceEEEEee-CCceeEEeecCCCC-cEEEEEEe
Q 001120 994 LSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISL-PMSNFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 994 i~g~V~~~~~~~~~~~l~v~l~~~~~~~~v~~~~~~-~~~~~f~~~~l~~~-~y~v~l~s 1051 (1150)
|+ =... ........|+.+..+... .. ..+ .....|.+..|.+| .|.+++..
T Consensus 215 l~--W~~p--~~~i~~Y~v~~~~~~~~~--~~-~~~~~~~~~~~i~~L~p~t~Y~~~V~A 267 (283)
T 1tdq_A 215 LI--WTKA--SGPIDHYRITFTPSSGIS--SE-VTVPRDRTSYTLTDLEPGAEYIISITA 267 (283)
T ss_dssp EE--EECC--CSCCSEEEEEEECSSSCC--EE-EEEESSCSEEEECCCCTTCCEEEEEEE
T ss_pred EE--EeCC--CCcccEEEEEEEcCCCCe--eE-EEeCCCccEEEECCCCCCCEEEEEEEE
Confidence 22 2111 112335556665543222 22 222 33467889999998 58888875
No 92
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=93.21 E-value=0.029 Score=54.79 Aligned_cols=61 Identities=23% Similarity=0.354 Sum_probs=46.9
Q ss_pred ceEEEEEEeecCCccccCCCCCCcceEEEEEeCCC-----ceEEEEEeCCCceEE--E--ccccCccEEEEEEcCCc
Q 001120 75 FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSG-----DLISSVITSSEGSYL--F--KNIIPGKYKLRASHPNL 142 (1150)
Q Consensus 75 ~~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g-----~~i~~ttTd~~G~f~--f--~~L~pG~Y~l~a~~~g~ 142 (1150)
..|+-.|++.. .|.|.+|+.|+|...++ +.+.+.+||+||+.. + ..+.+|.|+|++....|
T Consensus 26 ~~LTtHVLDt~-------~G~PAagv~V~L~~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 95 (138)
T 3iwv_A 26 SPLSTHVLNIA-------QGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKY 95 (138)
T ss_dssp CCEECCEEETT-------TTEECTTCEEEEEEECSSSCCEEEEEEEECCTTSCCTTSSCTTTCCSEEEEEEECHHHH
T ss_pred CCceEEEeecC-------CccCCCCCEEEEEEECCCCCCcEEEEEEecCCCCCcCCccCcccCCCceEEEEEehHHH
Confidence 35788888752 58999999999986542 457899999999985 2 24778999999865444
No 93
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=93.16 E-value=0.21 Score=44.24 Aligned_cols=50 Identities=16% Similarity=0.130 Sum_probs=39.6
Q ss_pred CCCCCcceEEEE--EeCCC-ceEEEEEeCCCceEEEccccCccEEEEEEcCCce
Q 001120 93 KGGGPSNVNVEL--LSHSG-DLISSVITSSEGSYLFKNIIPGKYKLRASHPNLS 143 (1150)
Q Consensus 93 ~g~plaGv~V~L--~~~~g-~~i~~ttTd~~G~f~f~~L~pG~Y~l~a~~~g~~ 143 (1150)
+|+|++||+|++ ++-.- -.+++..||++|.++|. .--|+-.|.+.+.||-
T Consensus 11 ~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~-~G~Gd~~v~A~k~G~~ 63 (82)
T 3e8v_A 11 EGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRF 63 (82)
T ss_dssp TSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEE
T ss_pred CCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEE-EcCCceEEEeccCCEE
Confidence 479999977765 44321 34678899999999999 7778999999999974
No 94
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=93.08 E-value=0.063 Score=53.18 Aligned_cols=59 Identities=24% Similarity=0.379 Sum_probs=45.0
Q ss_pred EEEEEEeecCCccccCCCCCCcceEEEEEeCC--C--ceEEEEEeCCCceEEE----ccccCccEEEEEEcCCc
Q 001120 77 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHS--G--DLISSVITSSEGSYLF----KNIIPGKYKLRASHPNL 142 (1150)
Q Consensus 77 IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~--g--~~i~~ttTd~~G~f~f----~~L~pG~Y~l~a~~~g~ 142 (1150)
|+-.|++.. +|.|.+|+.|+|...+ + +.+.+.+||+|||..- ..+.+|.|+|...-..|
T Consensus 32 LTtHVLDt~-------~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 98 (147)
T 4ank_A 32 LMVKVLDAV-------RGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 98 (147)
T ss_dssp EEEEEEETT-------TTEECCSCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred eEEEEEeCC-------CCcCCCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCCccccCCceEEEEEEHHHH
Confidence 678888752 5899999999998643 3 5688999999999852 23567999999865444
No 95
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=92.94 E-value=0.098 Score=55.10 Aligned_cols=67 Identities=15% Similarity=0.157 Sum_probs=49.7
Q ss_pred EEEeeEcCCCCccCCcEEEEEeCC--C-----------------ceeEEEee-CCCceEEecCCCCCcEEEEEEEEecCC
Q 001120 897 ATGTITLLSGQPKDGVSVEARSES--K-----------------GYYEETVT-DTSGSYRLRGLHPDTTYVIKVVKKDGF 956 (1150)
Q Consensus 897 ~~G~v~~~~g~p~~gv~v~~~~~~--~-----------------~~~~~~~T-d~~G~~~i~gL~Pg~~y~i~~~~~~~~ 956 (1150)
+.|+|.+.+|+|++||.||+---+ + ..+....| |++|.|+++-+.||+ |... +
T Consensus 55 v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~-yp~~----~-- 127 (209)
T 2bum_A 55 LEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGA-VPGR----K-- 127 (209)
T ss_dssp EEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCC-CBCS----T--
T ss_pred EEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCc-ccCC----C--
Confidence 389999999999999999985211 1 13677888 999999999999998 4421 1
Q ss_pred CCcceeccCCceEEEEecC
Q 001120 957 GSTKIERASPESVTVKVGS 975 (1150)
Q Consensus 957 ~~~~i~~~~p~~~~v~v~~ 975 (1150)
|. ..|.|+.+.|..
T Consensus 128 G~-----~R~~HIH~~V~~ 141 (209)
T 2bum_A 128 GS-----TQAPHISLIIFA 141 (209)
T ss_dssp TC-----BCCCCEEEEEEC
T ss_pred CC-----ccCcEEEEEEEC
Confidence 21 247788877743
No 96
>2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A
Probab=92.87 E-value=0.2 Score=58.54 Aligned_cols=75 Identities=19% Similarity=0.257 Sum_probs=52.9
Q ss_pred eeEEEEEEecCCCCCcccceEEEEeCCCc--ccc-ceeecCCceEEEeecCCcceEEeec--ccccccCCCceeEEecCC
Q 001120 807 SQISVRIYSKDDAGEPIPSVLLSLSGDDG--YRN-NSVSWAGGSFHFDNLFPGNFYLRPL--LKEYAFSPPAQAIELGSG 881 (1150)
Q Consensus 807 ~~i~v~v~~~~~~~~pl~gvllslsg~~~--~r~-n~~t~~~G~~~f~~L~PG~Y~~~~~--~key~~~p~~~~i~v~~g 881 (1150)
..|.|.++|..+++++|+||.|.|...++ +.. ...++ |...+.+|.+|+|.|++. ...|.. -.++.|+|+++
T Consensus 25 t~v~i~K~~~~d~~~~L~GA~f~L~~~~g~~v~e~~w~s~--~~~~~~~L~~G~YtL~Et~AP~GY~~-a~~I~FtV~~~ 101 (457)
T 2xi9_A 25 TSVLIRKYAIGDYSKLLEGATLQLTGDNVNSFQARVFSSN--DIGERIELSDGTYTLTELNSPAGYSI-AEPITFKVEAG 101 (457)
T ss_dssp CEEEEEEEETTBCSSCCCCCEEEEC---------CEEECC--SSCEEEECCSEEEEEEEEECCTTBCC-CCCEEEEEETT
T ss_pred eeEEEEEeccCCCCCccCCcEEEEEeCCCCeeeeeEEEeC--CceeEEeeCCceEEEEEecCCCCcee-ccCEEEEecCC
Confidence 56889999876678999999999987653 221 13344 444445799999999986 357997 47799999998
Q ss_pred ceE
Q 001120 882 ESR 884 (1150)
Q Consensus 882 ~~~ 884 (1150)
+..
T Consensus 102 ~v~ 104 (457)
T 2xi9_A 102 KVY 104 (457)
T ss_dssp EEE
T ss_pred eEE
Confidence 654
No 97
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=92.81 E-value=0.071 Score=53.99 Aligned_cols=27 Identities=22% Similarity=0.488 Sum_probs=24.9
Q ss_pred eEEEEEeCCCceEEEccccCccEEEEE
Q 001120 111 LISSVITSSEGSYLFKNIIPGKYKLRA 137 (1150)
Q Consensus 111 ~i~~ttTd~~G~f~f~~L~pG~Y~l~a 137 (1150)
.+.++++|++|+|.|.+|+||+|.|.+
T Consensus 107 y~r~t~~D~~G~F~F~~Lp~G~Yyl~a 133 (170)
T 1xpn_A 107 YVREATTDQNGRFDFDHIPNGTYYISS 133 (170)
T ss_dssp HCEEEEECSSCEEEECSCCSEEEEEEE
T ss_pred ceeEEEecCCCcEEecCCCCccEEEEE
Confidence 357899999999999999999999987
No 98
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=92.80 E-value=6.7 Score=43.50 Aligned_cols=196 Identities=15% Similarity=0.206 Sum_probs=96.2
Q ss_pred CCCceEEECccC--CeeEEEEEEEecCCeEEEecCceEEEEEecc----ceeee-ccE--EEec--eEEEEEEEeCCCcc
Q 001120 220 DADGKFMFKSVP--CGQYELVPHYKGENTVFDVSPSLVSMSVRHQ----HVTVP-EKF--QVTG--FSVGGRVVDENDMG 288 (1150)
Q Consensus 220 Da~G~f~f~~Lp--pG~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~----~~~l~-~~f--~~~g--~sV~G~V~d~~G~p 288 (1150)
..+|.|.+.-.| +|.|.|...+.+.+. .-+...+.|... ...+. ..+ ...+ ..+.-...|..|.+
T Consensus 62 ~~dG~y~v~y~p~~~G~~~i~v~~~~~~i----~gsPf~~~v~~~~d~~~~~~~G~gl~~~~~g~~~~f~V~~~D~~G~~ 137 (311)
T 1wlh_A 62 NGDGTYDVEFEPKEAGDYVINLTLDGDNV----NGFPKTVTVKPAPSAEHSYAEGEGLVKVFDNAPAEFTIFAVDTKGVA 137 (311)
T ss_dssp CSSSEEEEEECCCSCSEEEEEEEESSSBC----TTCSEEEEEECCBCTTTCCEESGGGTCEESSSCEEEEEECBBSSSSB
T ss_pred CCCCEEEEEEEccCccceEEEEEECCEEC----CCCceEEEEccccccceeEEeccccceeecCCCEEEEEEecCCCCCE
Confidence 468888776654 799999998766542 222233333211 00000 000 0111 11222334555555
Q ss_pred cc----CeEEEE---cceee---eEeCCCceEEECccC--CccEEEEEEecccccc--ceeeEEEcCCcceeeeEEEeee
Q 001120 289 VE----GVKILV---DGHER---SITDRDGYYKLDQVT--SNRYTIEAVKVHYKFN--KLKEYMVLPNMASIADIKAISY 354 (1150)
Q Consensus 289 la----GA~V~l---~G~~~---~~TD~dG~f~l~~L~--pG~Ytv~~~~~~y~~~--~~~~v~v~p~~~~i~dI~~~~~ 354 (1150)
.. ...+.+ +|..+ ..-..||.|.+.-.+ +|.|+|.+.-.+-... +. .+.+.+.. ....+.+...
T Consensus 138 ~~~g~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g~~I~gSPF-~v~V~~~~-d~~~v~~~~~ 215 (311)
T 1wlh_A 138 RTDGGDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIKNMPI-DVKCIEGA-NGEDSSFGSF 215 (311)
T ss_dssp CSSCCCCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETTEECTTCSC-EEEEECCC-CGGGCEEEEE
T ss_pred EecCCCcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECCEECCCCCE-EEEECCCC-CCCceEEEeE
Confidence 42 234444 34322 244578998886553 5999999987652211 11 23343321 0011111111
Q ss_pred EEEEEEEEcCC------cccEEEEEEcCCCcceeeeeeeCCCeEEEEE---EcCeeEEEEEEeecCCCCCceeeeCceEE
Q 001120 355 DICGVVRTVGS------GNKVKVALTHGPDKVKPQVKQTDNNGNFCFE---VPPGEYRLSAMAATPESSSGILFLPPYAD 425 (1150)
Q Consensus 355 ~V~G~V~~~~~------~~~a~Vtl~~g~~~~~~~~~~Td~dG~f~f~---L~pG~Y~l~~~~~~~~~~~G~~~~p~~~~ 425 (1150)
.+.-+..+..+ .....|.+....+ ..........||.|.+. ..+|.|+|.+.- .|.......+.
T Consensus 216 ~f~V~~~D~~gn~~~~G~~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~------~g~~I~gsPf~ 288 (311)
T 1wlh_A 216 TFTVAAKNKKGEVKTYGGDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKL------NGKHIEGSPFK 288 (311)
T ss_dssp EEEEECBCTTSSBCSSCCSCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEE------TTEECTTCSEE
T ss_pred EEEEEEeccCCCeeecCCCcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEE------CCEECCCCCEE
Confidence 11111112222 2235666664334 22344556789998776 678999999987 44434444566
Q ss_pred EEE
Q 001120 426 VVV 428 (1150)
Q Consensus 426 V~V 428 (1150)
+.|
T Consensus 289 v~v 291 (311)
T 1wlh_A 289 QVL 291 (311)
T ss_dssp EEE
T ss_pred EEE
Confidence 666
No 99
>1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A
Probab=92.65 E-value=15 Score=40.73 Aligned_cols=136 Identities=14% Similarity=0.125 Sum_probs=69.0
Q ss_pred CCccCCcEEEEEeCCC--ceeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCCCcceeccCCceEEEEecCccceeceE
Q 001120 906 GQPKDGVSVEARSESK--GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDF 983 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~~--~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d~~~~~f 983 (1150)
+.++.+-.|+....++ ...+.......-.|.|.||.||+.|.+++.+....| .+.|..........--.++..
T Consensus 120 ~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g-----~s~~~~~~~~~~~~~P~~l~~ 194 (368)
T 1fnf_A 120 SIDLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVYEQH-----ESTPLRGRQKTGLDSPTGIDF 194 (368)
T ss_dssp TCCCSEEEEEEEETTCTTCCEEEEECTTCCEEEECSCCTTCEEEEEEEEEETTE-----ECCCEEEEEECCCCCCEEEEE
T ss_pred CCCCcEEEEEEEECCCCCccEEEEcCCCcceEEecCCCCCCEEEEEEEEEeCCC-----CCCCeEeeecCCCCCCCccEE
Confidence 3456677777664332 223333344566899999999999999999753222 222322222222222233322
Q ss_pred EEEecCCcEEEEEEEEeccccccccceEEEEEecCCCCceEEEEeeCCceeEEeecCCCC-cEEEEEEe
Q 001120 984 LVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 984 ~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~v~~~~~~~~~~~f~~~~l~~~-~y~v~l~s 1051 (1150)
.. .....|...=... .......+|..+.............-.....|.+..|.++ .|.+++..
T Consensus 195 ~~---~~~~sv~l~W~~p--~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A 258 (368)
T 1fnf_A 195 SD---ITANSFTVHWIAP--RATITGYRIRHHPEHFSGRPREDRVPHSRNSITLTNLTPGTEYVVSIVA 258 (368)
T ss_dssp ES---CCSSEEEEEEECC--SSCCSEEEEEEECSCCSSCCEEEEEETTCCEEEEESCCTTCEEEEEEEE
T ss_pred EE---ccCCEEEEEEeCC--CCCcCEEEEEEecCCCCCCccEEEeCCCcCEEEECCCCCCCEEEEEEEE
Confidence 21 1211222222221 1123345565554433222222122234567889999999 58888775
No 100
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=92.61 E-value=1.6 Score=45.22 Aligned_cols=101 Identities=16% Similarity=0.211 Sum_probs=57.0
Q ss_pred eEEECccCCeeEEEEEEEecCCeEEEecCceEEEEEec-cceeeec-----cEEE-ec--eEEEEEEEeCCCccccCeEE
Q 001120 224 KFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVRH-QHVTVPE-----KFQV-TG--FSVGGRVVDENDMGVEGVKI 294 (1150)
Q Consensus 224 ~f~f~~LppG~Y~v~~~~~~~~~~~~~~P~~~~vtV~~-~~~~l~~-----~f~~-~g--~sV~G~V~d~~G~plaGA~V 294 (1150)
.|.+..+++|.|.|.+......-.. -....+.|+|.. ..+.+.. .... .+ ..|++...|.+| .|..++|
T Consensus 52 s~~~~~~~~G~htlta~A~D~aGn~-s~s~~v~vtV~~~~~Ptv~itsP~~g~~~~~~~~vtl~~~AsD~~g-~V~~Ve~ 129 (190)
T 3pdd_A 52 TAKITGAAVGAYNLKAVAVLSDGRR-IESPVTPVLVKVIVKPTVKLTAPKSNVVAYGNEFLKITATASDSDG-KISRVDF 129 (190)
T ss_dssp EEEECSCCSEEEEEEEEEEETTSCE-EECCCEEEEEECCCCCEEEEEECCTTCCCBTTSEEEEEEEEECSSS-CEEEEEE
T ss_pred EEEeccCCCccEEEEEEEEECCCCE-eeecceeEEeccCCCCceeecCCCCCcEEecCCeEEEEEEEECCCC-cEEEEEE
Confidence 5566678899999988643211000 122234555552 2222210 0000 12 356666666555 5999999
Q ss_pred EEcceeeeEeCCCce--EEECccCCccEEEEEEecc
Q 001120 295 LVDGHERSITDRDGY--YKLDQVTSNRYTIEAVKVH 328 (1150)
Q Consensus 295 ~l~G~~~~~TD~dG~--f~l~~L~pG~Ytv~~~~~~ 328 (1150)
++||..+.+ +..+. |.... ++|.|+|++++-.
T Consensus 130 ~~dg~~v~t-~t~~~y~~~~~~-~~G~~tl~a~A~D 163 (190)
T 3pdd_A 130 LVDGEVIGS-DREAPYEYEWKA-VEGNHEISVIAYD 163 (190)
T ss_dssp EETTEEEEE-ECSSSEEEEEEC-CSEEEEEEEEEEE
T ss_pred EECCEEEec-ccCCCEEEEEec-CCeeEEEEEEEEE
Confidence 999987753 33444 44444 7899999988743
No 101
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=92.47 E-value=0.39 Score=52.45 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=42.0
Q ss_pred EEeCCc---ceeceE--EEEEECCCCcccCCCCCCCcccccceeeEEE-eCCCceEEECcc-CCeeEEEEEEEecCCeEE
Q 001120 176 VVAQGN---PILGVH--IYLYSDDVGKVDCPQGSGNALGERKALCHAV-SDADGKFMFKSV-PCGQYELVPHYKGENTVF 248 (1150)
Q Consensus 176 V~~~G~---Pl~Ga~--V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~-TDa~G~f~f~~L-ppG~Y~v~~~~~~~~~~~ 248 (1150)
+..+|. +|+||. |.|+..... ..+.... ||++|.+.|.+| .+|+|+|.+... .++..
T Consensus 164 ~d~~~~~~~~L~GA~~~F~l~~~~~~---------------~~~~~~~~t~~~g~~~~~gLd~~g~Y~l~Et~a-~GY~~ 227 (262)
T 2x9z_A 164 TWVDATGAPIPAGAEATFDLVNAQAG---------------KVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSI-KGYSA 227 (262)
T ss_dssp EEECTTSCBCCCCSCEEEEEEETTTC---------------CEEEEEEECTTCSEEEECSCCTTSCEEEEECCB-TTBEE
T ss_pred EcCCCCcccCcCCcEEEEEEEECCCC---------------cEEEEEEecCCceEEEEeCCCCCCCEEEEEEEe-CCccc
Confidence 444555 899966 999986421 1222333 899999999999 799999999766 66554
Q ss_pred E
Q 001120 249 D 249 (1150)
Q Consensus 249 ~ 249 (1150)
.
T Consensus 228 ~ 228 (262)
T 2x9z_A 228 D 228 (262)
T ss_dssp E
T ss_pred c
Confidence 4
No 102
>3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris}
Probab=92.13 E-value=0.07 Score=63.47 Aligned_cols=83 Identities=11% Similarity=0.050 Sum_probs=54.4
Q ss_pred CCcceeceEEEEEECCCC-----cccCCCCCCC-cccccceeeEEEeCCCceEEECccC---------------CeeEEE
Q 001120 179 QGNPILGVHIYLYSDDVG-----KVDCPQGSGN-ALGERKALCHAVSDADGKFMFKSVP---------------CGQYEL 237 (1150)
Q Consensus 179 ~G~Pl~Ga~V~L~~~~~~-----~~~~~~g~~~-~~~~g~~~~~a~TDa~G~f~f~~Lp---------------pG~Y~v 237 (1150)
++.+|+||.|.|++.+.. .+.|.+..-. .+..-......+||++|.+.|.+|+ +|.|+|
T Consensus 368 ~~~~LaGAeF~Ly~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~~G~~~i~gL~~~d~~~~~~~~~~~~~~~Y~l 447 (488)
T 3uxf_A 368 DKTKYNGAQFQVYECTKTASGATLRDSDPSTQTVDPLTIGGEKTFTTAGQGTVEINYLRANDYVNGAKKDQLTDEDYYCL 447 (488)
T ss_dssp CGGGGTTCEEEEEEEEEETTEEEECCSCTTSSSCCCCCBTTBSCEECBTTTEEEEEEEECTTEETTEECCSCCTTSEEEE
T ss_pred CCcccCCCEEEEEeccCCcccceeeecccccccccceecCCceEEEECCCCEEEEcCeEeecccccccccccCCCCcEEE
Confidence 357999999999987532 1223321100 0000001246799999999999999 679999
Q ss_pred EEEEecCCeEEEecCceEEEEEeccc
Q 001120 238 VPHYKGENTVFDVSPSLVSMSVRHQH 263 (1150)
Q Consensus 238 ~~~~~~~~~~~~~~P~~~~vtV~~~~ 263 (1150)
++...++++ .+.+..+.|+|..++
T Consensus 448 ~EtkAP~GY--~l~~~pi~f~v~~~~ 471 (488)
T 3uxf_A 448 VETKAPEGY--NLQADPLPFRVLAEK 471 (488)
T ss_dssp EEEECCTTB--CCCSSCEEECCCHHH
T ss_pred EEeeCCCCc--ccCCCcEEEEEecCc
Confidence 998766654 455667788887654
No 103
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=92.05 E-value=0.32 Score=46.21 Aligned_cols=95 Identities=15% Similarity=0.263 Sum_probs=69.4
Q ss_pred eeEEEEEEecCCCCCcccceEEEEeCC---Cccc--cceeecCCceEE----EeecCCcceEEeeccccc-------ccC
Q 001120 807 SQISVRIYSKDDAGEPIPSVLLSLSGD---DGYR--NNSVSWAGGSFH----FDNLFPGNFYLRPLLKEY-------AFS 870 (1150)
Q Consensus 807 ~~i~v~v~~~~~~~~pl~gvllslsg~---~~~r--~n~~t~~~G~~~----f~~L~PG~Y~~~~~~key-------~~~ 870 (1150)
+.|+.||.|- ..|.|-+||.+.|.-. +.++ ....||+||++. -..+.+|.|.|+.-..+| .|=
T Consensus 1 ~~lstHVLDt-~~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Yf~~~g~~~F~ 79 (115)
T 1f86_A 1 CPLMVKVLDA-VRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWKALGISPFH 79 (115)
T ss_dssp CCEEEEEEET-TTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHHHHHTTCCCSE
T ss_pred CCeeEEEccC-CCCCcCCCCEEEEEEcCCCCCcEEEEEeecCCCccccCcCCCCCCcceEEEEEEEhhHhHhhcCCCCCc
Confidence 3578899997 5699999999988642 2222 346799999983 235679999999876665 222
Q ss_pred C-CceeEEecCC--ceEEEEEEEEeeeEeEEEeeE
Q 001120 871 P-PAQAIELGSG--ESREVIFQATRVAYSATGTIT 902 (1150)
Q Consensus 871 p-~~~~i~v~~g--~~~~v~~~~~r~~~s~~G~v~ 902 (1150)
| -...+.|.+. ++-+|-+-..+-.||-+.-|+
T Consensus 80 p~V~i~F~i~d~~~~HYHVPLLlSP~~YST~~~v~ 114 (115)
T 1f86_A 80 EHAEVVFTANDSGPRRYTIAALLSPYSYSTMAVVT 114 (115)
T ss_dssp EEEEEEEEESTTSCCEEEEEEEEETTEEEEEEEEE
T ss_pred ceEEEEEEECCCCCCCEEEeEEecCCcceEEEEec
Confidence 2 2345788763 788999999999999887765
No 104
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=92.05 E-value=3.4 Score=45.90 Aligned_cols=206 Identities=12% Similarity=0.125 Sum_probs=103.4
Q ss_pred ceEEEEEeCCCceEEEEEeCCCceEEEcc--ccCccEEEEEEcCCceEEeecc-EEEEEcc----cceeee-eee--eec
Q 001120 99 NVNVELLSHSGDLISSVITSSEGSYLFKN--IIPGKYKLRASHPNLSVEVRGS-TEVELGF----ENGEVD-DIF--FAP 168 (1150)
Q Consensus 99 Gv~V~L~~~~g~~i~~ttTd~~G~f~f~~--L~pG~Y~l~a~~~g~~~~~~~~-~~V~v~~----~~~~~~-~~l--~i~ 168 (1150)
.+.|++...... -.+.+-..+|.|.+.- -.+|.|.|.+...+.++. ++ ..+.+.. ....+. ..+ ...
T Consensus 44 ~~~v~i~gp~~~-~~~~~d~~dG~y~v~y~p~~~G~~~i~v~~~~~~i~--gsPf~~~v~~~~d~~~~~~~G~gl~~~~~ 120 (311)
T 1wlh_A 44 GFVVTIEGPAPV-DPVMVDNGDGTYDVEFEPKEAGDYVINLTLDGDNVN--GFPKTVTVKPAPSAEHSYAEGEGLVKVFD 120 (311)
T ss_dssp CEEEEEESSSCC-CCBCCCCSSSEEEEEECCCSCSEEEEEEEESSSBCT--TCSEEEEEECCBCTTTCCEESGGGTCEES
T ss_pred eEEEEEECCCcc-EEEEEECCCCEEEEEEEccCccceEEEEEECCEECC--CCceEEEEccccccceeEEeccccceeec
Confidence 355666543321 1122346788887663 367999999988777653 22 3333321 111110 001 011
Q ss_pred CcEEEEEEEe---CCccee----ceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccC--CeeEEEEE
Q 001120 169 GYEIRGLVVA---QGNPIL----GVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVP--CGQYELVP 239 (1150)
Q Consensus 169 g~~i~G~V~~---~G~Pl~----Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~Lp--pG~Y~v~~ 239 (1150)
|....-.|.. .|+++. ...+.+.+.++. ...+..+-..+|.|.+.-.| +|.|.|..
T Consensus 121 g~~~~f~V~~~D~~G~~~~~g~~~~~v~i~~p~g~---------------~~~~~v~d~~dGty~v~y~p~~~G~y~i~V 185 (311)
T 1wlh_A 121 NAPAEFTIFAVDTKGVARTDGGDPFEVAINGPDGL---------------VVDAKVTDNNDGTYGVVYDAPVEGNYNVNV 185 (311)
T ss_dssp SSCEEEEEECBBSSSSBCSSCCCCEEEEEECTTSC---------------BCCCEEEEETTTEEEEEECCCSSEEEEEEE
T ss_pred CCCEEEEEEecCCCCCEEecCCCcEEEEEECCCCC---------------eeeEEEEECCCCEEEEEEECCCCEEEEEEE
Confidence 2222333331 244431 234444433211 12245556678999876655 79999999
Q ss_pred EEecCCeEEEecCceEEEEEeccceeeeccEEEeceEEEEEEEeCCCccc----cCeEEEE---cceee--eEeCCCceE
Q 001120 240 HYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTGFSVGGRVVDENDMGV----EGVKILV---DGHER--SITDRDGYY 310 (1150)
Q Consensus 240 ~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g~sV~G~V~d~~G~pl----aGA~V~l---~G~~~--~~TD~dG~f 310 (1150)
.+.+.+ +..+...+.|....- +....+....+.-...|..|+|+ ....+.+ +|... .+.+.||.|
T Consensus 186 ~~~g~~----I~gSPF~v~V~~~~d--~~~v~~~~~~f~V~~~D~~gn~~~~G~~~l~v~i~~p~g~~~~~v~d~~~G~y 259 (311)
T 1wlh_A 186 TLRGNP----IKNMPIDVKCIEGAN--GEDSSFGSFTFTVAAKNKKGEVKTYGGDKFEVSITGPAEEITLDAIDNQDGTY 259 (311)
T ss_dssp EETTEE----CTTCSCEEEEECCCC--GGGCEEEEEEEEEECBCTTSSBCSSCCSCEEEEEESCCSEEEEEEEECSSSEE
T ss_pred EECCEE----CCCCCEEEEECCCCC--CCceEEEeEEEEEEEeccCCCeeecCCCcEEEEEECCCCCceeEEEECCCCEE
Confidence 876533 333334455543210 11111111222223346677555 3456666 35222 246788988
Q ss_pred EECcc--CCccEEEEEEecc
Q 001120 311 KLDQV--TSNRYTIEAVKVH 328 (1150)
Q Consensus 311 ~l~~L--~pG~Ytv~~~~~~ 328 (1150)
.+.-. .+|.|+|.+.-.+
T Consensus 260 ~v~y~p~~~G~y~i~V~~~g 279 (311)
T 1wlh_A 260 TAAYSLVGNGRFSTGVKLNG 279 (311)
T ss_dssp EEEEEEECSEEEEEEEEETT
T ss_pred EEEEECCCCEeEEEEEEECC
Confidence 76544 5799999988765
No 105
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=92.01 E-value=12 Score=50.48 Aligned_cols=213 Identities=17% Similarity=0.200 Sum_probs=109.2
Q ss_pred CCCCcce--EEEEEeCCCceEEE--EEeCCCceEEEc-----cccCccEEEEEEcC-Cce----EEe----eccEEEEEc
Q 001120 94 GGGPSNV--NVELLSHSGDLISS--VITSSEGSYLFK-----NIIPGKYKLRASHP-NLS----VEV----RGSTEVELG 155 (1150)
Q Consensus 94 g~plaGv--~V~L~~~~g~~i~~--ttTd~~G~f~f~-----~L~pG~Y~l~a~~~-g~~----~~~----~~~~~V~v~ 155 (1150)
-.|+..- .|++.+++|..+.. ..++..|.++.+ ....|.|+|++... +-. +.+ .++.+|.+.
T Consensus 132 ~~p~~~~~~~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~~~~~~~~~F~V~eYvlP~FeV~v~ 211 (1451)
T 4acq_A 132 FHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKSGGRTEHPFTVEEFVLPKFEVQVT 211 (1451)
T ss_dssp CCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTTCCEEEEEEEECCCCCCSCEEEEE
T ss_pred CcCccCceeEEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEecCCceEEEEEEEeeeeCCcEEEEEe
Confidence 3555432 57889999976654 467888866543 22459999999764 221 211 233444443
Q ss_pred ccceeeeeeeeecCcEEEEEEEe---CCcceeceEEEEEE--CCCCcccCCCCCCCccccccee---eEEEeCCCceEEE
Q 001120 156 FENGEVDDIFFAPGYEIRGLVVA---QGNPILGVHIYLYS--DDVGKVDCPQGSGNALGERKAL---CHAVSDADGKFMF 227 (1150)
Q Consensus 156 ~~~~~~~~~l~i~g~~i~G~V~~---~G~Pl~Ga~V~L~~--~~~~~~~~~~g~~~~~~~g~~~---~~a~TDa~G~f~f 227 (1150)
... .+.+.+-.+.+.|.+ -|+|+.| .+++.- .......|.. + ....+ .+..+|.+|.+.+
T Consensus 212 ~~~-----~~~~~~~~~~~~i~a~Y~~G~pV~G-~~~v~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~G~~~~ 279 (1451)
T 4acq_A 212 VPK-----IITILEEEMNVSVCGLYTYGKPVPG-HVTVSICRKYSDASDCHG---E---DSQAFCEKFSGQLNSHGCFYQ 279 (1451)
T ss_dssp CCS-----EEESSCSCCEEEEEEECSSSCBCCC-EEEECCBCCCTTTTTSCS---S---CCCCCBCCEEEECCSSCCCEE
T ss_pred CCc-----eEeecCCEEEEEEEEEEcCCCEEcc-eEEEEEEEeccccccccc---c---ccccccceeeEEEcCCeEEEE
Confidence 221 122334345556653 4999999 344432 1100001100 0 00011 2467888998877
Q ss_pred Ccc----C------CeeEEEEEEEe--cCCe--------EEEecCceEEEEEeccceeeeccEEEec--eEEEEEEEeCC
Q 001120 228 KSV----P------CGQYELVPHYK--GENT--------VFDVSPSLVSMSVRHQHVTVPEKFQVTG--FSVGGRVVDEN 285 (1150)
Q Consensus 228 ~~L----p------pG~Y~v~~~~~--~~~~--------~~~~~P~~~~vtV~~~~~~l~~~f~~~g--~sV~G~V~d~~ 285 (1150)
.-. . ...+.|.+.-. +.+. .+..+|-.+.|. .. + .+-.+| |.+.-+|.+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~l~V~atVtE~gtg~~~~~~~~i~i~~s~~~i~f~--~t----~-~~fkPG~pf~~~v~v~~~d 352 (1451)
T 4acq_A 280 QVKTKVFQLKRKEYEMKLHTEAQIQEEGTVVELTGRQSSEITRTITKLSFV--KV----D-SHFRQGIPFFGQVRLVDGK 352 (1451)
T ss_dssp ECCGGGSCSSSSCCBCBCEEEEECSSSCCSCCEEECCCCEEECCCSEEEEE--EE----C-SEECSSSCCEEEEEEECTT
T ss_pred EEEHHHhcchhhccCeEEEEEEEEEEccceEEEeceEEEEEEeeeeEEEEe--cC----C-CcccCCCcEEEEEEEEcCC
Confidence 511 1 12344544321 1111 111222222221 11 1 122234 45666778889
Q ss_pred CccccCeEEEE--cce---eeeEeCCCceEEEC-ccC---CccEEEEEE
Q 001120 286 DMGVEGVKILV--DGH---ERSITDRDGYYKLD-QVT---SNRYTIEAV 325 (1150)
Q Consensus 286 G~plaGA~V~l--~G~---~~~~TD~dG~f~l~-~L~---pG~Ytv~~~ 325 (1150)
|.|+++..|.+ ++. ...+||++|...|. +.+ .+.++|++.
T Consensus 353 g~P~~~~~v~v~~~~~~~~~~~~t~~~G~a~f~i~~~~~~~~~l~i~~~ 401 (1451)
T 4acq_A 353 GVPIPNKVIFIRGNEANYYSNATTDEHGLVQFSINTTNVMGTSLTVRVN 401 (1451)
T ss_dssp SCBCCSCBCEEEETTTCCCCCCBCCTTSEEEEECCCCSSSCEEEEEESC
T ss_pred CCcCCCceEEEEecccceeeeeEeCCCCcEEEEEeCCCCCCcEEEEEEE
Confidence 99999998887 332 23589999976653 222 245778765
No 106
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=91.98 E-value=0.16 Score=48.08 Aligned_cols=91 Identities=21% Similarity=0.230 Sum_probs=64.2
Q ss_pred eeEEEEEEecCCCCCcccceEEEEeCCCccccceeecCCceEEE---eecCCcceEEeecccccc-------cCC-Ccee
Q 001120 807 SQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHF---DNLFPGNFYLRPLLKEYA-------FSP-PAQA 875 (1150)
Q Consensus 807 ~~i~v~v~~~~~~~~pl~gvllslsg~~~~r~n~~t~~~G~~~f---~~L~PG~Y~~~~~~key~-------~~p-~~~~ 875 (1150)
+.|+.+|.|. ..|.|-+||-+.|.--+..-....||+||++.. ..|.||.|.|+.-..+|= |=| -+..
T Consensus 10 ~~lstHVLDt-~~G~PAagv~V~L~~~~~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~tg~Yf~~~g~~~F~p~V~v~ 88 (116)
T 3qva_A 10 STLSTHILDI-STGTPAEGVTVSLSREGETLANLVTNAQGRIATFSAAPLPAGRYCLTAETGAWFARAGRESVFTRAQID 88 (116)
T ss_dssp BCEEEEEEET-TTTEECTTCEEEEEETTEEEEEEECCTTSEECCSCSSCBCSSEEEEEECHHHHHHHTTCCCSEEEEEEE
T ss_pred CCeeeEEeec-CCCcCCCCCEEEEEEccEeEEEeccCCCCCccccccccCCCceEEEEEeHHHHHhhcCCCcceeeEEEE
Confidence 6699999997 569999999999986532223467999999843 346789999987665542 333 2345
Q ss_pred EEecC--CceEEEEEEEEeeeEeEE
Q 001120 876 IELGS--GESREVIFQATRVAYSAT 898 (1150)
Q Consensus 876 i~v~~--g~~~~v~~~~~r~~~s~~ 898 (1150)
+.|++ +++-+|-+-..+-.||.|
T Consensus 89 F~i~d~~~~HYHVPLLlSP~gYSTY 113 (116)
T 3qva_A 89 FVIGEAAEDHFHLPFLIAPGGWSTY 113 (116)
T ss_dssp EEC-----CCEECCEEEETTEEEEE
T ss_pred EEeCCCCCCCEEEeEEecCCccccc
Confidence 67777 577788888888888865
No 107
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=91.59 E-value=12 Score=37.23 Aligned_cols=133 Identities=19% Similarity=0.179 Sum_probs=70.4
Q ss_pred ccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCCCcceeccCCceEEEEecCccceeceEEEEe
Q 001120 908 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFE 987 (1150)
Q Consensus 908 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d~~~~~f~~~~ 987 (1150)
++.+-.|+....++...........-.|.|.||.|++.|.+++.+..+. ..+.|....+.....--.++.+....
T Consensus 33 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~-----~~s~~~~~~~~t~p~~P~~l~~~~~~ 107 (186)
T 1qr4_A 33 KFDRYRLTYVSPSGKKNEMEIPVDSTSFILRGLDAGTEYTISLVAEKGR-----HKSKPTTIKGSTVVGSPKGISFSDIT 107 (186)
T ss_dssp CCSEEEEEEECTTCCEEEEEECTTCSEEEEESCCSSCEEEEEEEEESSS-----CBCCCEEEEEECCCCCCSCEEEESCC
T ss_pred CccEEEEEEEeCCCCeeEEECCCCCCEEEECCCCCCCEEEEEEEEEcCC-----ccCCCEEEEEECCCCCCCccEEEEeC
Confidence 4445555555333333333344455689999999999999999986431 12334444444333333444433221
Q ss_pred cCCcEEEEEEEEeccccccccceEEEEEecCCCCceEEEEeeCCceeEEeecCCCC-cEEEEEEe
Q 001120 988 QPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 988 ~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~v~~~~~~~~~~~f~~~~l~~~-~y~v~l~s 1051 (1150)
...+.|+ =... ........|+.+..+........+ -+....|.+..|.++ .|.+++..
T Consensus 108 -~~sv~l~--W~~p--~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~i~~L~p~t~Y~~~V~A 166 (186)
T 1qr4_A 108 -ENSATVS--WTPP--RSRVDSYRVSYVPITGGTPNVVTV-DGSKTRTKLVKLVPGVDYNVNIIS 166 (186)
T ss_dssp -SSCEEEE--ECCC--SSCCSEEEEEEEETTCCCCEEEEE-ETTCCEEEECSCCSSCEEEEEEEE
T ss_pred -CCEEEEE--EECC--CCcccEEEEEEEeCCCCCceEEEc-CCCcCEEEEcCCCCCCEEEEEEEE
Confidence 1222222 1111 112345556665543322222212 234567889999999 69998886
No 108
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=90.83 E-value=0.59 Score=44.23 Aligned_cols=91 Identities=20% Similarity=0.347 Sum_probs=66.0
Q ss_pred eeEEEEEEecCCCCCcccceEEEEeCC--Cccc--cceeecCCceEE----EeecCCcceEEeeccccc-------ccCC
Q 001120 807 SQISVRIYSKDDAGEPIPSVLLSLSGD--DGYR--NNSVSWAGGSFH----FDNLFPGNFYLRPLLKEY-------AFSP 871 (1150)
Q Consensus 807 ~~i~v~v~~~~~~~~pl~gvllslsg~--~~~r--~n~~t~~~G~~~----f~~L~PG~Y~~~~~~key-------~~~p 871 (1150)
+.|+.||.|. ..|.|-+||-+.|.-- ++++ ....||+||++. =..+.+|.|.|+.-..+| .|=|
T Consensus 4 ~~lstHVLDt-~~G~PAagv~V~L~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Yf~~~~~~~F~p 82 (114)
T 2g2n_A 4 NILSVHILNQ-QTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFKKQNLESFFP 82 (114)
T ss_dssp CCEEEEEEET-TTTEECCSCEEEEEEECSSSEEEEEEEECCTTSEESCCSCSSCCCSEEEEEEECHHHHHHHTTCCCSCS
T ss_pred CCeEEEEecC-CCcCCCCCCEEEEEEeCCCCcEEEEEEecCCCCccccccCCCCCCceEEEEEEEhhHhHhhcCCCCCcc
Confidence 6789999997 5699999999988642 2222 346799999972 235778999998766554 2333
Q ss_pred -CceeEEecC-CceEEEEEEEEeeeEeEE
Q 001120 872 -PAQAIELGS-GESREVIFQATRVAYSAT 898 (1150)
Q Consensus 872 -~~~~i~v~~-g~~~~v~~~~~r~~~s~~ 898 (1150)
-...+.|.+ +++-+|-+-..+-.||.|
T Consensus 83 ~V~i~F~i~d~~~HYHVPLLlSP~~YSTY 111 (114)
T 2g2n_A 83 EIPVEFHINKVNEHYHVPLLLSQYGYSTY 111 (114)
T ss_dssp CEEEEEEESSTTSCEEEEEEEETTEEEEE
T ss_pred eEEEEEEECCCCCCeEEeEEecCCccccc
Confidence 234578875 578889888888888875
No 109
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=90.60 E-value=16 Score=37.05 Aligned_cols=157 Identities=16% Similarity=0.235 Sum_probs=79.9
Q ss_pred CceeEEecC--CceEEEEEEEEeeeEeEEEeeEcCCCCccCCcEEEEEeCC--CceeEEEeeCCCceEEecCCCCCcEEE
Q 001120 872 PAQAIELGS--GESREVIFQATRVAYSATGTITLLSGQPKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYV 947 (1150)
Q Consensus 872 ~~~~i~v~~--g~~~~v~~~~~r~~~s~~G~v~~~~g~p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~Pg~~y~ 947 (1150)
++..+.+.+ ..+..|.|..-. +.++.+-.|+....+ ............-.|.|.||.|++.|.
T Consensus 25 ~P~~l~~~~~~~~sv~lsW~~p~-------------~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~ 91 (203)
T 2gee_A 25 QPTDLSFVDITDSSIGLRWTPLN-------------SSTIIGYRITVVAAGEGIPIFEDFVDSSVGYYTVTGLEPGIDYD 91 (203)
T ss_dssp CCEEEEEECCTTTCEEEEEECCS-------------SSSCCEEEEEEEESSSSSCCEEEEEETTCCEEEECSCCTTCEEE
T ss_pred CCCccEEEecCCCEEEEEecCCC-------------CCCccEEEEEEEECCCCCCceeEEcCCCccEEEeCCCCCCCEEE
Confidence 344444444 345666665422 234555566555433 122333344556789999999999999
Q ss_pred EEEEEecCCCCcceeccCCceEEEEecCccceeceEEEEecCCcEEEEEEEEeccccccccceEEEEEecCCCCceEEEE
Q 001120 948 IKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVI 1027 (1150)
Q Consensus 948 i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d~~~~~f~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~v~~~~ 1027 (1150)
+++.+....| .+.|..+.......-..++.+..... ..+.|+ =.... ...+....|..+.......... .
T Consensus 92 ~~V~a~~~~g-----~s~~~~~~t~~~~p~P~~l~~~~~~~-~sv~l~--W~~p~-~~~i~~Y~v~~~~~~~~~~~~~-~ 161 (203)
T 2gee_A 92 ISVYTVKNGG-----ESTPTTLTQQTAVPPPTDLRFTNIGP-DTMRVT--WAPPP-SIDLTNFLVRYSPVKNEEDVAE-L 161 (203)
T ss_dssp EEEEEESSSC-----BCCCEEEEEECCCCCCEEEEEEEEET-TEEEEE--EECCS-SCCCSEEEEEEEETTCGGGCEE-E
T ss_pred EEEEEEeCCC-----ccccEeeeecCCCcCCCceEEEEcCC-CEEEEE--EcCCC-CCCccEEEEEEEECCCCCccEE-E
Confidence 9999864322 12233332221111234444333311 222122 11111 1123355566555333322222 3
Q ss_pred eeC-CceeEEeecCCCC-cEEEEEEe
Q 001120 1028 SLP-MSNFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 1028 ~~~-~~~~f~~~~l~~~-~y~v~l~s 1051 (1150)
.++ ....|.+..|.++ .|.+++..
T Consensus 162 ~~~~~~~~~~i~~L~p~t~Y~~~V~A 187 (203)
T 2gee_A 162 SISPSDNAVVLTNLLPGTEYVVSVSS 187 (203)
T ss_dssp EECTTCCEEEECSCCTTCEEEEEEEE
T ss_pred EcCCCcCEEEECCCCCCCEEEEEEEE
Confidence 333 4567889999998 58888876
No 110
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=90.56 E-value=0.54 Score=45.39 Aligned_cols=98 Identities=16% Similarity=0.256 Sum_probs=71.9
Q ss_pred eeeEEEEEEecCCCCCcccceEEEEeC---CCccc--cceeecCCceEE----EeecCCcceEEeeccccc-------cc
Q 001120 806 LSQISVRIYSKDDAGEPIPSVLLSLSG---DDGYR--NNSVSWAGGSFH----FDNLFPGNFYLRPLLKEY-------AF 869 (1150)
Q Consensus 806 l~~i~v~v~~~~~~~~pl~gvllslsg---~~~~r--~n~~t~~~G~~~----f~~L~PG~Y~~~~~~key-------~~ 869 (1150)
.+.|+.+|.|- ..|.|-+||-+.|.- ++.++ ....||+||++. -..+.+|.|.|+.-..+| .|
T Consensus 9 ~~~LStHVLDt-~~G~PAagv~V~L~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Yf~~~g~~~F 87 (127)
T 2h4e_A 9 KXPLMVKVLDA-VRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSYWKALGISPF 87 (127)
T ss_dssp -CCEEEEEEET-TTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHHHHHTTCCCS
T ss_pred cCCEEEEEecC-CCcCCCCCCEEEEEEeCCCCCeEEEEEeecCCCccccCcCCCCCccceEEEEEEEhHHhHhhcCCCCC
Confidence 46799999997 569999999999863 22222 346799999983 235779999999876665 22
Q ss_pred CC-CceeEEecCC--ceEEEEEEEEeeeEeEEEeeEcC
Q 001120 870 SP-PAQAIELGSG--ESREVIFQATRVAYSATGTITLL 904 (1150)
Q Consensus 870 ~p-~~~~i~v~~g--~~~~v~~~~~r~~~s~~G~v~~~ 904 (1150)
=| -...+.|.+. +.-+|-+-..+-.||.+.-|++.
T Consensus 88 ~p~V~I~F~i~d~~~~HYHVPLLlSP~gYST~~~v~~~ 125 (127)
T 2h4e_A 88 HEHAEVVFTANDSGPRRYTIAALLSPYSYSTTAVVTNP 125 (127)
T ss_dssp EEEEEEEEEESTTSCCEEEEEEEEETTEEEEEEEEEC-
T ss_pred cceEEEEEEECCCCCCCEEEeEEecCCcceeeEEeccC
Confidence 22 2345788764 78899999999999998888764
No 111
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=90.48 E-value=0.36 Score=46.11 Aligned_cols=97 Identities=20% Similarity=0.305 Sum_probs=70.8
Q ss_pred eeEEEEEEecCCCCCcccceEEEEeCC---Cccc--cceeecCCceEE----EeecCCcceEEeeccccc-------ccC
Q 001120 807 SQISVRIYSKDDAGEPIPSVLLSLSGD---DGYR--NNSVSWAGGSFH----FDNLFPGNFYLRPLLKEY-------AFS 870 (1150)
Q Consensus 807 ~~i~v~v~~~~~~~~pl~gvllslsg~---~~~r--~n~~t~~~G~~~----f~~L~PG~Y~~~~~~key-------~~~ 870 (1150)
+.|+.||.|- ..|.|-+||.+.|.-. +.++ ....||+||++. =..+.+|.|.|+.-..+| .|=
T Consensus 2 ~~lstHVLDt-~~G~PAagv~V~L~~~~~~~~~~~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~tg~Yf~~~g~~~F~ 80 (119)
T 1oo2_A 2 CPLMVKILDA-VKGTPAGSVALKVSQKTADGGWTQIATGVTDATGEIHNLITEQQFPAGVYRVEFDTKAYWTNQGSTPFH 80 (119)
T ss_dssp CSEEEEEEET-TTTEECTTCEEEEEEECTTSCEEEEEEEECCTTSCCTTCSCGGGCCSEEEEEEECHHHHHHHTTCCCSE
T ss_pred CceeEEEecC-CCcCCCCCCEEEEEEeCCCCCcEEEEEEecCCCCcccCcCCCCCCCceEEEEEEEhHHhHhhcCCCCCc
Confidence 4688999997 5699999999998631 2222 346799999972 235779999999876665 232
Q ss_pred C-CceeEEecCC--ceEEEEEEEEeeeEeEEEeeEcC
Q 001120 871 P-PAQAIELGSG--ESREVIFQATRVAYSATGTITLL 904 (1150)
Q Consensus 871 p-~~~~i~v~~g--~~~~v~~~~~r~~~s~~G~v~~~ 904 (1150)
| -...+.|.+. ++-+|-+-..+-.||.+.-|++.
T Consensus 81 p~V~i~F~i~d~~~~HYHVPLLlSP~~YST~~~v~~~ 117 (119)
T 1oo2_A 81 EVAEVVFDAHPEGHGHYTLALLLSPFSYTTTAVVSSV 117 (119)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEETTEEEEEEEECC-
T ss_pred ceEEEEEEECCCCCCCEEEeEEecCCcceeeEEeccC
Confidence 2 2345788764 78899999999999988777653
No 112
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=90.39 E-value=0.33 Score=53.06 Aligned_cols=51 Identities=14% Similarity=0.296 Sum_probs=40.6
Q ss_pred CCCcceE--EEEEeCCC-ceEEEEE-eCCCceEEEccc-cCccEEEEEEc-CCceEE
Q 001120 95 GGPSNVN--VELLSHSG-DLISSVI-TSSEGSYLFKNI-IPGKYKLRASH-PNLSVE 145 (1150)
Q Consensus 95 ~plaGv~--V~L~~~~g-~~i~~tt-Td~~G~f~f~~L-~pG~Y~l~a~~-~g~~~~ 145 (1150)
.+|+||. |+|++.++ ..+..+. |+++|.+.|.+| .+|+|.|.+++ .||.+.
T Consensus 172 ~~L~GA~~~F~l~~~~~~~~~~~~~~t~~~g~~~~~gLd~~g~Y~l~Et~a~GY~~~ 228 (262)
T 2x9z_A 172 PIPAGAEATFDLVNAQAGKVVQTVTLTTDKNTVTVNGLDKNTEYKFVERSIKGYSAD 228 (262)
T ss_dssp BCCCCSCEEEEEEETTTCCEEEEEEECTTCSEEEECSCCTTSCEEEEECCBTTBEEE
T ss_pred cCcCCcEEEEEEEECCCCcEEEEEEecCCceEEEEeCCCCCCCEEEEEEEeCCcccc
Confidence 4899966 99998765 3443333 899999999999 79999999854 788765
No 113
>1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1
Probab=89.26 E-value=16 Score=36.10 Aligned_cols=47 Identities=17% Similarity=0.155 Sum_probs=32.9
Q ss_pred ccCCcEEEEEeCC-CceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 908 PKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 908 p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
++.+-.|+....+ +...........-.|.|.||.||+.|.+++.+..
T Consensus 121 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~ 168 (186)
T 1qr4_A 121 RVDSYRVSYVPITGGTPNVVTVDGSKTRTKLVKLVPGVDYNVNIISVK 168 (186)
T ss_dssp CCSEEEEEEEETTCCCCEEEEEETTCCEEEECSCCSSCEEEEEEEEEE
T ss_pred cccEEEEEEEeCCCCCceEEEcCCCcCEEEEcCCCCCCEEEEEEEEEc
Confidence 4666666666543 2233334445667899999999999999999853
No 114
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=88.97 E-value=0.35 Score=47.85 Aligned_cols=53 Identities=19% Similarity=0.186 Sum_probs=41.9
Q ss_pred EEEEEEeC-CCccccCeEEEE-----ccee--e--eEeCCCceEEE----CccCCccEEEEEEeccc
Q 001120 277 VGGRVVDE-NDMGVEGVKILV-----DGHE--R--SITDRDGYYKL----DQVTSNRYTIEAVKVHY 329 (1150)
Q Consensus 277 V~G~V~d~-~G~plaGA~V~l-----~G~~--~--~~TD~dG~f~l----~~L~pG~Ytv~~~~~~y 329 (1150)
|+-.|+|. .|.|.+|+.|.| +|+. + ++||+|||..- +.+.+|.|+|......|
T Consensus 32 LTtHVLDt~~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~tg~Y 98 (147)
T 4ank_A 32 LMVKVLDAVRGSPAINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKSY 98 (147)
T ss_dssp EEEEEEETTTTEECCSCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHHH
T ss_pred eEEEEEeCCCCcCCCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCCccccCCceEEEEEEHHHH
Confidence 67789997 899999999998 3332 2 59999999752 34568999999987776
No 115
>3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A
Probab=88.75 E-value=28 Score=37.15 Aligned_cols=185 Identities=17% Similarity=0.165 Sum_probs=89.8
Q ss_pred EEeCCCceEEeccCCCCceEEEEEe--CCCeEEee------e--c---cceeEEee--eeeEEEEEEecCCCCCcccceE
Q 001120 763 TSTGADGSFIGGPLYDDITYNVEAS--KPGYYLRQ------V--G---PNSFSCQK--LSQISVRIYSKDDAGEPIPSVL 827 (1150)
Q Consensus 763 ~~Td~~G~f~~gpL~~~~~y~v~a~--k~gy~l~~------~--~---~~~f~~~k--l~~i~v~v~~~~~~~~pl~gvl 827 (1150)
..+...-+|.+..|.++..|.+... ...-.-.. + . |..+.... -.+|.|.-... +.++.+-.
T Consensus 68 ~~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~s~~~~~t~~~~~~P~~l~~~~~~~~sv~l~W~~p---~~~~~~Y~ 144 (290)
T 3r8q_A 68 NLAPDSSSVVVSGLMVATKYEVSVYALKDTLTSRPAQGVVTTLENVSPPRRARVTDATETTITISWRTK---TETITGFQ 144 (290)
T ss_dssp EECTTCCEEEECSCCSSCEEEEEEEEEETTEECCCEEEEEECCCCCCCCEEEEEEEECSSCEEEEEECC---SCCCCEEE
T ss_pred EcCCCccEEEeCCCCCCCEEEEEEEEEeCCCCCCCcceeEecCCCCCCCceeEEEEcCCCeEEEEEeCC---CCcccEEE
Confidence 3445567899999999877765543 22111000 0 0 12232222 23444444332 23455555
Q ss_pred EEEeCCCc--cccceeecCCceEEEeecCCcc-eEEeecc--cccccCCCceeEEecCCceEEEEEEEEeeeEeEEEeeE
Q 001120 828 LSLSGDDG--YRNNSVSWAGGSFHFDNLFPGN-FYLRPLL--KEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTIT 902 (1150)
Q Consensus 828 lslsg~~~--~r~n~~t~~~G~~~f~~L~PG~-Y~~~~~~--key~~~p~~~~i~v~~g~~~~v~~~~~r~~~s~~G~v~ 902 (1150)
+.....++ ..........-.+.+.+|.||+ |.++-.. ..-.-.|....+....+.-..+.+... ...++ .|+
T Consensus 145 v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~p~~P~~l~~~~~-~~~sv--~l~ 221 (290)
T 3r8q_A 145 VDAVPANGQTPIQRTIKPDVRSYTITGLQPGTDYKIYLYTLNDNARSSPVVIDASTAIDAPSNLRFLAT-TPNSL--LVS 221 (290)
T ss_dssp EEEEESSSCCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEEE-ETTEE--EEE
T ss_pred EEEEECCCCcceEEecCCCccEEEECCCCCCCEEEEEEEEEeCCcccCCEEEEecCCCCCCCccEEEee-CCCEE--EEE
Confidence 55432211 1122234456689999999998 4455322 111112222222233333333333211 01111 122
Q ss_pred --cCCCCccCCcEEEEEeCCCceeEE--EeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 903 --LLSGQPKDGVSVEARSESKGYYEE--TVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 903 --~~~g~p~~gv~v~~~~~~~~~~~~--~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
...| ++.+-.|+....++..... ......-.|.|.||.||+.|.+++.+..
T Consensus 222 W~~p~~-~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~ 276 (290)
T 3r8q_A 222 WQPPRA-RITGYIIKYEKPGSPPREVVPRPRPGVTEATITGLEPGTEYTIYVIALK 276 (290)
T ss_dssp EECCSS-CCCEEEEEEECTTSCCEECSSCCCTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred EeCCCC-cccEEEEEEEeCCCCcceeEeccCCCccEEEECCCCCCCEEEEEEEEEe
Confidence 1222 5666666666443222111 1113445899999999999999999754
No 116
>1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1
Probab=88.63 E-value=27 Score=36.92 Aligned_cols=184 Identities=17% Similarity=0.195 Sum_probs=89.0
Q ss_pred EeCCCceEEeccCCCCceEEEEEeC-CCeEEee-------ec---cceeEEee--eeeEEEEEEecCCCCCcccceEEEE
Q 001120 764 STGADGSFIGGPLYDDITYNVEASK-PGYYLRQ-------VG---PNSFSCQK--LSQISVRIYSKDDAGEPIPSVLLSL 830 (1150)
Q Consensus 764 ~Td~~G~f~~gpL~~~~~y~v~a~k-~gy~l~~-------~~---~~~f~~~k--l~~i~v~v~~~~~~~~pl~gvllsl 830 (1150)
.....-.|.+..|.++..|.+.... .+..... +. |..+.... -..|.|.-.... .++.+-.+..
T Consensus 63 ~~~~~~~~~i~~L~p~t~Y~~~V~a~~~~g~s~~~~~~~~t~p~~P~~l~~~~~~~~sv~l~W~~p~---~~i~~Y~v~~ 139 (283)
T 1tdq_A 63 LQPPLSQYSVQALRPGSRYEVSISAVRGTNESDASSTQFTTEIDAPKNLRVGSRTATSLDLEWDNSE---AEAQEYKVVY 139 (283)
T ss_dssp ECTTCSEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEEECSSCEEEEEECCS---SCCSEEEEEE
T ss_pred eCCCCCEEEecCCCCCCEEEEEEEEECCCCCCCCeeEEEECCCCCCCceEEEecCCCeEEEEecCCC---CCccEEEEEE
Confidence 3456678999999998777665541 1111111 00 12333222 234444443321 3455555554
Q ss_pred eCCCc--cccceeecC---CceEEEeecCCcc-eEEeecc--cccccCCCceeEEecCCceEEEEEEEEeeeEeEEEeeE
Q 001120 831 SGDDG--YRNNSVSWA---GGSFHFDNLFPGN-FYLRPLL--KEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTIT 902 (1150)
Q Consensus 831 sg~~~--~r~n~~t~~---~G~~~f~~L~PG~-Y~~~~~~--key~~~p~~~~i~v~~g~~~~v~~~~~r~~~s~~G~v~ 902 (1150)
...++ .+.-.+... .-.+.+.+|.||+ |.++-.. ..-.-.|......-....-..+.+.... ..++ .|+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~s~~~~~~~~t~~~~P~~l~~~~~~-~~sv--~l~ 216 (283)
T 1tdq_A 140 STLAGEQYHEVLVPKGIGPTTKTTLTDLVPGTEYGVGISAVMNSKQSIPATMNARTELDSPRDLMVTASS-ETSI--SLI 216 (283)
T ss_dssp EETTCCCCEEEEEECCSSSEEEEEECSCCTTCEEEEEEEEEETTEECCCEEEEEECCCCCCEEEEEEEEC-SSCE--EEE
T ss_pred EeCCCCcceEEECCCCCcccceEEEecCCCCCEEEEEEEEEeCCCCCcceEEEecCCCCCCCccEEeEec-CCEE--EEE
Confidence 32221 112223333 6789999999998 5555332 2111111111111111122222222110 0111 111
Q ss_pred --cCCCCccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 903 --LLSGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 903 --~~~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..+ .++.+-.|+....++...+.......-.|.|.||.||+.|.+++.+..
T Consensus 217 W~~p~-~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~ 269 (283)
T 1tdq_A 217 WTKAS-GPIDHYRITFTPSSGISSEVTVPRDRTSYTLTDLEPGAEYIISITAER 269 (283)
T ss_dssp EECCC-SCCSEEEEEEECSSSCCEEEEEESSCSEEEECCCCTTCCEEEEEEEEE
T ss_pred EeCCC-CcccEEEEEEEcCCCCeeEEEeCCCccEEEECCCCCCCEEEEEEEEEc
Confidence 122 345566666664443333334444556899999999999999999753
No 117
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=87.78 E-value=0.58 Score=44.77 Aligned_cols=53 Identities=19% Similarity=0.276 Sum_probs=40.8
Q ss_pred EEEEEEe--CCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEE-----ECccCCeeEEEEEE
Q 001120 172 IRGLVVA--QGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFM-----FKSVPCGQYELVPH 240 (1150)
Q Consensus 172 i~G~V~~--~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~-----f~~LppG~Y~v~~~ 240 (1150)
|+=.|++ .|.|.+|+.|.|+..+ ...+.+.+||+|||.. =..+.+|.|+|...
T Consensus 11 lstHVLDt~~G~PAagv~V~L~~~~----------------~~~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~ 70 (121)
T 2h0e_A 11 LTTHILDLTCGKPAANVKIGLKRLG----------------ESIMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFH 70 (121)
T ss_dssp EECCEEETTTTEECTTCEEEEEETT----------------SCCCEEEECCTTSSCSSCSEEGGGCCSEEEEEEEC
T ss_pred eeEEEecCCCcCCCCCCEEEEEECC----------------ceEEEEEecCCCCCccCCcCCCCCcCceEEEEEEE
Confidence 4445665 4999999999999852 1247899999999972 23577899999984
No 118
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=87.48 E-value=1.8 Score=47.54 Aligned_cols=70 Identities=20% Similarity=0.310 Sum_probs=51.6
Q ss_pred EEEEeCCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccCCeeEEEEEEEecCCeEEEecCc
Q 001120 174 GLVVAQGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPS 253 (1150)
Q Consensus 174 G~V~~~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~LppG~Y~v~~~~~~~~~~~~~~P~ 253 (1150)
+....++..++++.|.|... +..+....||+.|.|.|..|++|.|+|.....+ + |.
T Consensus 201 ~~~~a~~~~~~~~~vpl~~~-----------------~~~va~~~~d~~G~f~~~~l~~G~y~v~v~a~g------~-p~ 256 (274)
T 1ti6_B 201 AGILVQGDCFEGAKVVLKSG-----------------GKEVASAETNFFGEFKFDALDNGEYTVEIDADG------K-SY 256 (274)
T ss_dssp EEEEETTEECTTCEEEEEET-----------------TEEEEEEECCTTSEEEEEEECSEEEEEEEEETT------E-EE
T ss_pred cccccccccccCCEEEEEcC-----------------CcEEEEEeecCcCcEEEeccCCcceEEEEecCC------C-Cc
Confidence 33446788899999999854 224678999999999999999999999997654 4 55
Q ss_pred eEEEEEeccceeee
Q 001120 254 LVSMSVRHQHVTVP 267 (1150)
Q Consensus 254 ~~~vtV~~~~~~l~ 267 (1150)
...+.|.+.+..+.
T Consensus 257 ~~~~~~~~~~~~lg 270 (274)
T 1ti6_B 257 SDTVVIDDKSVDLG 270 (274)
T ss_dssp EEEEEESSSCEEEE
T ss_pred cceeEEccCccccc
Confidence 55566644444443
No 119
>2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A
Probab=87.47 E-value=0.46 Score=55.46 Aligned_cols=63 Identities=10% Similarity=0.127 Sum_probs=40.4
Q ss_pred CCCCCcceEEEEEeCCCceEEE--EEeCCCceEEEccccCccEEEEEEc--CCceEEeeccEEEEEcccce
Q 001120 93 KGGGPSNVNVELLSHSGDLISS--VITSSEGSYLFKNIIPGKYKLRASH--PNLSVEVRGSTEVELGFENG 159 (1150)
Q Consensus 93 ~g~plaGv~V~L~~~~g~~i~~--ttTd~~G~f~f~~L~pG~Y~l~a~~--~g~~~~~~~~~~V~v~~~~~ 159 (1150)
++..|+||.++|++.+|..+.. .+++..+.+ + +|++|+|+|++.. .||... ..+.|+|..+..
T Consensus 37 ~~~~L~GA~f~L~~~~g~~v~e~~w~s~~~~~~-~-~L~~G~YtL~Et~AP~GY~~a--~~I~FtV~~~~v 103 (457)
T 2xi9_A 37 YSKLLEGATLQLTGDNVNSFQARVFSSNDIGER-I-ELSDGTYTLTELNSPAGYSIA--EPITFKVEAGKV 103 (457)
T ss_dssp CSSCCCCCEEEEC---------CEEECCSSCEE-E-ECCSEEEEEEEEECCTTBCCC--CCEEEEEETTEE
T ss_pred CCCccCCcEEEEEeCCCCeeeeeEEEeCCceeE-E-eeCCceEEEEEecCCCCceec--cCEEEEecCCeE
Confidence 3689999999999888765554 556666664 3 5999999999854 588753 348888876543
No 120
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=86.74 E-value=1.3 Score=48.67 Aligned_cols=50 Identities=20% Similarity=0.246 Sum_probs=43.4
Q ss_pred CCCCcceEEEEEeCCCceEEEEEeCCCceEEEccccCccEEEEEEcCCceEE
Q 001120 94 GGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVE 145 (1150)
Q Consensus 94 g~plaGv~V~L~~~~g~~i~~ttTd~~G~f~f~~L~pG~Y~l~a~~~g~~~~ 145 (1150)
..-++++.|.|. ..|..+....||+.|.|.|..|++|.|+|.+.+.|| ..
T Consensus 207 ~~~~~~~~vpl~-~~~~~va~~~~d~~G~f~~~~l~~G~y~v~v~a~g~-p~ 256 (274)
T 1ti6_B 207 GDCFEGAKVVLK-SGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGK-SY 256 (274)
T ss_dssp TEECTTCEEEEE-ETTEEEEEEECCTTSEEEEEEECSEEEEEEEEETTE-EE
T ss_pred cccccCCEEEEE-cCCcEEEEEeecCcCcEEEeccCCcceEEEEecCCC-Cc
Confidence 456778889888 447778889999999999999999999999999999 55
No 121
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=85.76 E-value=0.49 Score=46.19 Aligned_cols=97 Identities=21% Similarity=0.345 Sum_probs=67.5
Q ss_pred eEEeeeeeEEEEEEecCCCCCcccceEEEEeCCC----ccc--cceeecCCceEE--E--eecCCcceEEeeccccc---
Q 001120 801 FSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDD----GYR--NNSVSWAGGSFH--F--DNLFPGNFYLRPLLKEY--- 867 (1150)
Q Consensus 801 f~~~kl~~i~v~v~~~~~~~~pl~gvllslsg~~----~~r--~n~~t~~~G~~~--f--~~L~PG~Y~~~~~~key--- 867 (1150)
..+...+.|+.+|.|- ..|.|-+||.+.|.--+ .+. ....||+||++. + ..|.||.|.|+.-..+|
T Consensus 20 ~~~~~~~~LTtHVLDt-~~G~PAagv~V~L~~~~~~~~~w~~l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~tg~Yf~~ 98 (138)
T 3iwv_A 20 MSATLLSPLSTHVLNI-AQGVPGANMTIVLHRLDPVSSAWNILTTGITNDDGRCPGLITKENFIAGVYKMRFETGKYWDA 98 (138)
T ss_dssp ------CCEECCEEET-TTTEECTTCEEEEEEECSSSCCEEEEEEEECCTTSCCTTSSCTTTCCSEEEEEEECHHHHHHH
T ss_pred cccCCCCCceEEEeec-CCccCCCCCEEEEEEECCCCCCcEEEEEEecCCCCCcCCccCcccCCCceEEEEEehHHHHHh
Confidence 4455668899999997 56999999999886321 222 236799999884 2 34789999999876665
Q ss_pred ----ccCCC-ceeEEecC-CceEEEEEEEEeeeEeEE
Q 001120 868 ----AFSPP-AQAIELGS-GESREVIFQATRVAYSAT 898 (1150)
Q Consensus 868 ----~~~p~-~~~i~v~~-g~~~~v~~~~~r~~~s~~ 898 (1150)
.|=|. +..+.|.+ ++.-+|-+-..+-.||.|
T Consensus 99 ~g~~~F~p~V~V~F~i~d~~~HYHVPLLlSP~gYSTY 135 (138)
T 3iwv_A 99 LGETCFYPYVEIVFTITNTSQHYHVPLLLSRFSYSTT 135 (138)
T ss_dssp TTCCCSCSCEEEEEEECCTTSCEECCEEEETTEEEEE
T ss_pred cCCCccceeeEEEEEECCCCCCeEEeEEecCCcceee
Confidence 24443 45578886 577888888888888875
No 122
>2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A
Probab=85.36 E-value=33 Score=34.59 Aligned_cols=47 Identities=19% Similarity=0.205 Sum_probs=33.2
Q ss_pred ccCCcEEEEEeCCC--ceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 908 PKDGVSVEARSESK--GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 908 p~~gv~v~~~~~~~--~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
++.+-.|+....++ ........-..-.|.|.||.||+.|.+++.+..
T Consensus 141 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~~ 189 (203)
T 2gee_A 141 DLTNFLVRYSPVKNEEDVAELSISPSDNAVVLTNLLPGTEYVVSVSSVY 189 (203)
T ss_dssp CCSEEEEEEEETTCGGGCEEEEECTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CccEEEEEEEECCCCCccEEEEcCCCcCEEEECCCCCCCEEEEEEEEec
Confidence 66777777765332 223333344567899999999999999999753
No 123
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=84.51 E-value=8.6 Score=42.19 Aligned_cols=53 Identities=21% Similarity=0.266 Sum_probs=42.6
Q ss_pred eEEEEEEEeCCCccccCeEEEE---ccee---eeEeCCCceEEE--CccCCccEEEEEEecc
Q 001120 275 FSVGGRVVDENDMGVEGVKILV---DGHE---RSITDRDGYYKL--DQVTSNRYTIEAVKVH 328 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l---~G~~---~~~TD~dG~f~l--~~L~pG~Ytv~~~~~~ 328 (1150)
..+.-+|.| .|.||+|..|.+ +|.. ..+||++|...+ ....+|.++|++...+
T Consensus 21 ~t~tatV~D-~gnpv~g~~V~fs~~~G~l~~~~~~Td~~G~atvtltst~aG~~~VtA~v~~ 81 (282)
T 1f00_I 21 ITYTVKVMK-GDKPVSNQEVTFTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSD 81 (282)
T ss_dssp EEEEEEEEE-TTEECTTCEEEEEESSSEESCSEEECCTTSEEEEEEECSSCEEECEEEEETT
T ss_pred EEEEEEEEE-CCcccCCcEEEEEcCCCccccceeEECCCcEEEEEEEcCCceEEEEEEEECC
Confidence 356668899 999999999988 5643 269999998764 5667899999998876
No 124
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=84.06 E-value=18 Score=36.48 Aligned_cols=51 Identities=24% Similarity=0.380 Sum_probs=34.6
Q ss_pred CCCCccCCcEEEEEeCCCceeEEEeeC-----CCceEEecCCCCCcEEEEEEEEec
Q 001120 904 LSGQPKDGVSVEARSESKGYYEETVTD-----TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 904 ~~g~p~~gv~v~~~~~~~~~~~~~~Td-----~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.+|.|+.+-.|+....+.........+ .+-.|.|.||.|++.|.+++.+..
T Consensus 34 ~~g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 89 (209)
T 2vkw_A 34 TGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALN 89 (209)
T ss_dssp CCSSCCCEEEEEEEESSCCCCEEEEEEHHHHHHHSEEEECCCCTTCEEEEEEEEEE
T ss_pred CCCcceeEEEEEEeeCCCCCceEeEeeccCCCccceEEeCCCCCCCeEEEEEEEEc
Confidence 467788888888775442211111111 234899999999999999999754
No 125
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=84.01 E-value=24 Score=36.58 Aligned_cols=77 Identities=19% Similarity=0.227 Sum_probs=49.7
Q ss_pred CcEEEEEEEeCCccee----ceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccCCeeEEEEEEEecC
Q 001120 169 GYEIRGLVVAQGNPIL----GVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGE 244 (1150)
Q Consensus 169 g~~i~G~V~~~G~Pl~----Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~LppG~Y~v~~~~~~~ 244 (1150)
...+.|+|+.+|+|+. |+.+.|+-..-. . ..-.......||.|+ ..|-.|+|.|++...+.
T Consensus 7 ~a~l~G~iv~tgE~i~~~~~gv~i~l~e~g~~---------~-----~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~nGp 71 (202)
T 4fxt_A 7 KATLTGKAIYDGEAVGVRSGSSEFALFQDGYA---------L-----KGSIPVYIAQDGSYS-VSLFNGDYKLVRMGNAP 71 (202)
T ss_dssp EEEEEEEEEETTEECBCCTTTEEEEEECCC------------------CCEEEEBCTTSEEE-EEEESEEEEEEEEETCS
T ss_pred CceEEEEEEECCCEeeecCCceEEEEEEcccC---------C-----CCCeeEEEcCCCcEE-EEEEcceeEEEECCCCC
Confidence 3467999998877764 789999865210 0 012467788999999 89999999999632232
Q ss_pred CeEEEecCceEEEEEecc
Q 001120 245 NTVFDVSPSLVSMSVRHQ 262 (1150)
Q Consensus 245 ~~~~~~~P~~~~vtV~~~ 262 (1150)
-+.-...++.+.|.+.
T Consensus 72 --f~~~~~dti~v~i~G~ 87 (202)
T 4fxt_A 72 --WERPSNDTIYITVRGN 87 (202)
T ss_dssp --BCCCSSCEEEEEESSS
T ss_pred --cccCCCceEEEEECCC
Confidence 1101334566666554
No 126
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=83.50 E-value=8.4 Score=38.21 Aligned_cols=50 Identities=18% Similarity=0.252 Sum_probs=34.0
Q ss_pred CCccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 906 GQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
|.++.+-.|+....+............-.|.|.||.||+.|.+++.+...
T Consensus 131 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~ 180 (197)
T 3lpw_A 131 GSRILGYIVEMQTKGSDKWATCATVKVTEATITGLIQGEEYSFRVSAQNE 180 (197)
T ss_dssp TSCCCEEEEEEEETTCSCCEEEEEESSSEEEECCCCTTCEEEEEEEEEET
T ss_pred CCcccEEEEEEEeCCCCceEEeecccccEEEeCCcCCCCEEEEEEEEEeC
Confidence 44667777777654432222223335668999999999999999997543
No 127
>1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1
Probab=82.59 E-value=46 Score=34.08 Aligned_cols=119 Identities=18% Similarity=0.338 Sum_probs=70.9
Q ss_pred CCCCcceEEEEEeCCCceEEE--EEeCCCceEEEccccC---c---cEEEEEEc-CCceEEeeccEEEEEcccceeeeee
Q 001120 94 GGGPSNVNVELLSHSGDLISS--VITSSEGSYLFKNIIP---G---KYKLRASH-PNLSVEVRGSTEVELGFENGEVDDI 164 (1150)
Q Consensus 94 g~plaGv~V~L~~~~g~~i~~--ttTd~~G~f~f~~L~p---G---~Y~l~a~~-~g~~~~~~~~~~V~v~~~~~~~~~~ 164 (1150)
|..+.-++|.|+. +|..+.+ .+.+.+-.|+|.+||- | .|+|.+.. +||.....+. .++ +.
T Consensus 19 g~rp~~i~v~L~~-~G~~~~~~~l~~~~~W~~~F~~Lp~y~~G~~i~YtV~E~~v~gY~~~i~G~-~IT---------Nt 87 (187)
T 1d2o_A 19 GKRPEKVSVNLLA-NGEKVKTLDVTSETNWKYEFKDLPKYDEGKKIEYTVTEDHVKDYTTDINGT-TIT---------NK 87 (187)
T ss_dssp SCCCSEEEEEEEE-TTEEEEEEEEEGGGTTEEEEEEEESEETTEECCEEEEECCCTTEEEEEETT-EEE---------EE
T ss_pred CCCCceEEEEEEE-CCeEeeeEEEecCCCcEEEECCCcccCCCCEEEEEEEeCCCCCcEEeeccE-EEE---------cc
Confidence 5677889999986 4644433 3345677899999985 4 69999854 7886553221 121 11
Q ss_pred eeecCcEEEEE-EEeC-----CcceeceEEEEEECCCCcccCCCCCCCcccccceeeE---EEeCCCceEEECccCCe--
Q 001120 165 FFAPGYEIRGL-VVAQ-----GNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCH---AVSDADGKFMFKSVPCG-- 233 (1150)
Q Consensus 165 l~i~g~~i~G~-V~~~-----G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~---a~TDa~G~f~f~~LppG-- 233 (1150)
......+|.++ +..+ |.--..+.|.|+.+.. .... ...+.+..|+|.+||.-
T Consensus 88 ~~P~~~~i~V~K~W~d~~~~~~~rP~~I~v~L~~dG~-----------------~~g~~~~l~~~n~W~~tf~~Lp~~~~ 150 (187)
T 1d2o_A 88 YTPGETSATVTKNWDDNNNQDGKRPTEIKVELYQDGK-----------------ATGKTAILNESNNWTHTWTGLDEKAK 150 (187)
T ss_dssp ECTTEEEEEEEEEEESSTTSSSCCCSCEEEEEEETTE-----------------EEEEEEEESGGGTTEEEEEEEESEET
T ss_pred ccCccccceeeEEEcCCCCccCCCCceEEEEEEeCCe-----------------EeceEEEEecCCceEEEEcCCCccCC
Confidence 11112234443 4443 2222569999998521 1211 22345679999999863
Q ss_pred ----eEEEEEE
Q 001120 234 ----QYELVPH 240 (1150)
Q Consensus 234 ----~Y~v~~~ 240 (1150)
.|+|.+.
T Consensus 151 G~~i~YtV~E~ 161 (187)
T 1d2o_A 151 GQQVKYTVEEL 161 (187)
T ss_dssp TEECCEEEEEC
T ss_pred CCEEEEEEEEe
Confidence 5888874
No 128
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=82.42 E-value=48 Score=44.68 Aligned_cols=215 Identities=14% Similarity=0.107 Sum_probs=109.4
Q ss_pred eceecCCCCce-EEEEEeccchhhhhccccceeE--EEEeCCCceE----EeccCCCCceEEEEEeCC-CeEEeee----
Q 001120 729 EGSVSPPLSGV-NIRIIAAEDSQIASLKKGHLAL--ETSTGADGSF----IGGPLYDDITYNVEASKP-GYYLRQV---- 796 (1150)
Q Consensus 729 ~G~v~p~l~gv-~i~i~~~~~~~~~~~~~~~~~~--~~~Td~~G~f----~~gpL~~~~~y~v~a~k~-gy~l~~~---- 796 (1150)
...-.|.-..+ .|+|.+.+. ..+. ...++..|.| .+.+...-..|.|.|... |-..+..
T Consensus 129 ~~~~~p~~~~~~~v~i~dp~g---------~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~~~~~~~~~F~V~ 199 (1451)
T 4acq_A 129 DENFHPLNELIPLVYIQDPKG---------NRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKSGGRTEHPFTVE 199 (1451)
T ss_dssp CTTCCBCCCEEEEEEEECTTS---------CEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTTCCEEEEEEEEC
T ss_pred CCCCcCccCceeEEEEECCCC---------CEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEecCCceEEEEEEEe
Confidence 33334553333 467766543 3433 3567888854 455555556999999854 3222211
Q ss_pred c---c-c--eeEEee-----eeeEEEEEEecCCCCCcccceEEEEeCC--Cccc-------------cceeecCCceEEE
Q 001120 797 G---P-N--SFSCQK-----LSQISVRIYSKDDAGEPIPSVLLSLSGD--DGYR-------------NNSVSWAGGSFHF 850 (1150)
Q Consensus 797 ~---~-~--~f~~~k-----l~~i~v~v~~~~~~~~pl~gvllslsg~--~~~r-------------~n~~t~~~G~~~f 850 (1150)
+ | + .+...+ -..+.++|...=.-|+|++|...-..+- .+|+ ....+|.+|.+.|
T Consensus 200 eYvlP~FeV~v~~~~~~~~~~~~~~~~i~a~Y~~G~pV~G~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 279 (1451)
T 4acq_A 200 EFVLPKFEVQVTVPKIITILEEEMNVSVCGLYTYGKPVPGHVTVSICRKYSDASDCHGEDSQAFCEKFSGQLNSHGCFYQ 279 (1451)
T ss_dssp CCCCCSCEEEEECCSEEESSCSCCEEEEEEECSSSCBCCCEEEECCBCCCTTTTTSCSSCCCCCBCCEEEECCSSCCCEE
T ss_pred eeeCCcEEEEEeCCceEeecCCEEEEEEEEEEcCCCEEcceEEEEEEEeccccccccccccccccceeeEEEcCCeEEEE
Confidence 1 1 1 122111 1245566665555699999954321211 1121 0134677777666
Q ss_pred eec----------CCcceEEeecccccccC---CCceeEEecCCceEEEEEEEEee------eEeEEEeeEcCCCCccCC
Q 001120 851 DNL----------FPGNFYLRPLLKEYAFS---PPAQAIELGSGESREVIFQATRV------AYSATGTITLLSGQPKDG 911 (1150)
Q Consensus 851 ~~L----------~PG~Y~~~~~~key~~~---p~~~~i~v~~g~~~~v~~~~~r~------~~s~~G~v~~~~g~p~~g 911 (1150)
.=. ....+++.+...|---. -....|.|.. ....|.|..++. .|.+.=+|+..+|.|+++
T Consensus 280 ~~~~~~~~~~~~~~~~~l~V~atVtE~gtg~~~~~~~~i~i~~-s~~~i~f~~t~~~fkPG~pf~~~v~v~~~dg~P~~~ 358 (1451)
T 4acq_A 280 QVKTKVFQLKRKEYEMKLHTEAQIQEEGTVVELTGRQSSEITR-TITKLSFVKVDSHFRQGIPFFGQVRLVDGKGVPIPN 358 (1451)
T ss_dssp ECCGGGSCSSSSCCBCBCEEEEECSSSCCSCCEEECCCCEEEC-CCSEEEEEEECSEECSSSCCEEEEEEECTTSCBCCS
T ss_pred EEEHHHhcchhhccCeEEEEEEEEEEccceEEEeceEEEEEEe-eeeEEEEecCCCcccCCCcEEEEEEEEcCCCCcCCC
Confidence 411 12233343332221000 0000111111 012455665554 344666678999999999
Q ss_pred cEEEEEeCCCceeEEEeeCCCceEEecCCCC---CcEEEEEEEEe
Q 001120 912 VSVEARSESKGYYEETVTDTSGSYRLRGLHP---DTTYVIKVVKK 953 (1150)
Q Consensus 912 v~v~~~~~~~~~~~~~~Td~~G~~~i~gL~P---g~~y~i~~~~~ 953 (1150)
+.|++.-.......+.+||+||...+.=-.| ...+.|+++..
T Consensus 359 ~~v~v~~~~~~~~~~~~t~~~G~a~f~i~~~~~~~~~l~i~~~~~ 403 (1451)
T 4acq_A 359 KVIFIRGNEANYYSNATTDEHGLVQFSINTTNVMGTSLTVRVNYK 403 (1451)
T ss_dssp CBCEEEETTTCCCCCCBCCTTSEEEEECCCCSSSCEEEEEESCCC
T ss_pred ceEEEEecccceeeeeEeCCCCcEEEEEeCCCCCCcEEEEEEEEe
Confidence 9988875433334667899999766553233 24577776643
No 129
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=82.32 E-value=30 Score=35.31 Aligned_cols=126 Identities=13% Similarity=0.177 Sum_probs=67.4
Q ss_pred ceEEEEEeCCCceEE-EEEeCCCceEEEc--cccCccEEEEEEcCCceEEeecc-EEEEEcc---cceeee-eee--eec
Q 001120 99 NVNVELLSHSGDLIS-SVITSSEGSYLFK--NIIPGKYKLRASHPNLSVEVRGS-TEVELGF---ENGEVD-DIF--FAP 168 (1150)
Q Consensus 99 Gv~V~L~~~~g~~i~-~ttTd~~G~f~f~--~L~pG~Y~l~a~~~g~~~~~~~~-~~V~v~~---~~~~~~-~~l--~i~ 168 (1150)
.+++++.+++|.... ..+-+.+|.|.+. .-.+|.|.|.....+..+. ++ ..+.+.. +...+. +.| ...
T Consensus 35 ~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g~~i~--gSPf~~~V~~~d~~~~~~~G~GL~~~~v 112 (188)
T 2k7p_A 35 EITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDNMHIP--GSPLQFYVDYVNCGHVTAYGPGLTHGVV 112 (188)
T ss_dssp CEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETTEECT--TCSEEEEECCTTSSSCEEESSTTTEEET
T ss_pred eEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECCEecC--CCCEEEEecccCCcceEEeCccccccee
Confidence 467777788875543 3444788987664 4467999999988877654 33 4444432 111110 000 011
Q ss_pred CcEEEEEEEeCCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccC--CeeEEEEEEEec
Q 001120 169 GYEIRGLVVAQGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVP--CGQYELVPHYKG 243 (1150)
Q Consensus 169 g~~i~G~V~~~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~Lp--pG~Y~v~~~~~~ 243 (1150)
|-...-.|...++...+..|.+...+. ......-..||.|.+.=.| +|.|.|...+.+
T Consensus 113 g~~~~F~V~t~dag~g~l~v~I~gp~~-----------------~~~~~~d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (188)
T 2k7p_A 113 NKPATFTVNTKDAGEGGLSLAIEGPSK-----------------AEISCTDNQDGTCSVSYLPVLPGDYSILVKYNE 172 (188)
T ss_dssp TSCEEEEEECTTCCSSCEEEEEECSSC-----------------CEEEEEECTTSEEEEEEECCSSEEEEEEEEETT
T ss_pred CccEEEEEEeCCCCCCCeEEEEeCCCC-----------------CeEEEEECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 112222333223333444555543210 1224456678977665554 689998887655
No 130
>3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic}
Probab=82.27 E-value=10 Score=33.97 Aligned_cols=62 Identities=26% Similarity=0.400 Sum_probs=39.4
Q ss_pred ccCCcEEEEEeCC--CceeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCCCcceeccCCceEEEEec
Q 001120 908 PKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVG 974 (1150)
Q Consensus 908 p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~ 974 (1150)
++.+-.|+....+ +...+.......-.|.|.||.||+.|.|++.+... ..++.|-+..+..+
T Consensus 28 ~i~~Y~v~y~~~~~~~~~~~~~~~~~~t~~~l~gL~P~t~Y~~~V~A~~~-----~g~S~p~~~~~~~~ 91 (98)
T 3tes_A 28 AFDSFMIQYQESEKVGEAINLTVPGSERSYDLTGLKPGTEYTVSIYGVKG-----GHRSNPLSAEFTTG 91 (98)
T ss_dssp SCSEEEEEEEETTBCSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEET-----TEEBCCEEEEEECS
T ss_pred ccceEEEEEEECCCCCceEEEEcCCCcCEEEECCCCCCCEEEEEEEEEeC-----CcccCCEEEEEEcC
Confidence 4555556555433 22233344445668999999999999999998632 24556666665543
No 131
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=82.05 E-value=28 Score=35.60 Aligned_cols=59 Identities=14% Similarity=0.072 Sum_probs=40.2
Q ss_pred CCCcceEEEEEeCCCceE-EEEEeCCCceEE--EccccCccEEEEEEcCCceEEeeccEEEEE
Q 001120 95 GGPSNVNVELLSHSGDLI-SSVITSSEGSYL--FKNIIPGKYKLRASHPNLSVEVRGSTEVEL 154 (1150)
Q Consensus 95 ~plaGv~V~L~~~~g~~i-~~ttTd~~G~f~--f~~L~pG~Y~l~a~~~g~~~~~~~~~~V~v 154 (1150)
.....+++++..++|..+ +..+-..+|.|. |..-.+|.|.|.+...|.++. .....+.|
T Consensus 28 ~~~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g~~V~-gSPf~v~V 89 (191)
T 2k7q_A 28 TDLSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNGQHVA-SSPIPVVI 89 (191)
T ss_dssp CCSSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETTEECT-TCSEEEEE
T ss_pred CCCCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECCEECC-CCCEEEEE
Confidence 456678999998888543 344447789886 455567999999998887654 11245555
No 132
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=81.88 E-value=51 Score=34.08 Aligned_cols=131 Identities=17% Similarity=0.152 Sum_probs=69.9
Q ss_pred eeeeCCCeEEEEE---EcCeeEEEEEEeecCCCCCceeeeCceEEEEEc--CcccceEEEEeeeEEEEEEEeccC----C
Q 001120 384 VKQTDNNGNFCFE---VPPGEYRLSAMAATPESSSGILFLPPYADVVVK--SPLLNIEFSQALVNVLGNVACKER----C 454 (1150)
Q Consensus 384 ~~~Td~dG~f~f~---L~pG~Y~l~~~~~~~~~~~G~~~~p~~~~V~V~--~p~~~I~F~q~~a~V~G~V~~~~~----~ 454 (1150)
...-..||.|.+. -.+|.|+|.+.. .|....-..+.+.|. .....+........ |.+.+. |
T Consensus 61 ~v~d~~dGty~v~y~p~~~G~~~i~V~~------~g~~i~gSPf~v~v~~~~~~~~~~~~~~~f~----V~~~D~~G~~~ 130 (212)
T 1qfh_A 61 KVTDNNDGTYGVVYDAPVEGNYNVNVTL------RGNPIKNMPIDVKCIEGANGEDSSFGSFTFT----VAAKNKKGEVK 130 (212)
T ss_dssp EEEECSSSEEEEEECCCSSEEEEEEEEE------TTEECBTCSEEEEEECCCCGGGCEEEEEEEE----EECBCTTSSBC
T ss_pred EEEECCCcEEEEEEECcCcEEEEEEEEE------CCEecCCCcceEEEccCCCCCceEEEEEEEE----EEEeccCCCEe
Confidence 3344578999887 466999999987 343333344566662 11222333222222 223221 1
Q ss_pred ---CCceEEEEEEeCCccccCCcceeEEE-ecCCCcEEEc--ccCCccEEEEEEeecccccccCCCeeEEceEEEEEEec
Q 001120 455 ---GPLVTVTLMRLGQKHYDGTEKKTVSL-TDDSDQFLFR--DVLPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGT 528 (1150)
Q Consensus 455 ---~~~~~VtL~~~~~~~~~~~~~~~~~~-Td~~G~f~f~--~L~PG~Y~v~~~~~~~~~~~~~~~~c~~~~~~~v~V~~ 528 (1150)
...+.+.+...++ .....+ ...+|+|.+. -..||.|.|.++.. +--...++..+.|.+
T Consensus 131 ~~G~~~l~v~i~~p~g-------~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~---------g~~I~gSPF~v~V~~ 194 (212)
T 1qfh_A 131 TYGGDKFEVSITGPAE-------EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLN---------GKHIEGSPFKQVLGN 194 (212)
T ss_dssp SSCCCCEEEEEEECCS-------EEEEEEEECSSSEEEEEEEEESSEEEEEEEEET---------TEECBTCSEEEEESC
T ss_pred ecCCCcEEEEEECCCC-------ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEEC---------CEECCCCCeEEEEcC
Confidence 1245666665432 122233 3567866654 44589999999842 333345677888864
Q ss_pred Ccc---cceeEEEee
Q 001120 529 NDV---KGVEFVQKG 540 (1150)
Q Consensus 529 ~~~---~~v~F~q~G 540 (1150)
... ....|-.+|
T Consensus 195 ~~~~~~~~~~~~~~~ 209 (212)
T 1qfh_A 195 PGKKNPEVKSFTTTR 209 (212)
T ss_dssp GGGCCTTSCCEEEEE
T ss_pred CCCcCCcccccceee
Confidence 332 234565444
No 133
>2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A
Probab=81.63 E-value=8.9 Score=38.91 Aligned_cols=50 Identities=24% Similarity=0.258 Sum_probs=33.5
Q ss_pred CCCccCCcEEEEEeCCCceeEEEeeC-CCceEEecCCCCCcEEEEEEEEec
Q 001120 905 SGQPKDGVSVEARSESKGYYEETVTD-TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~~~~~~~~~Td-~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.+.++.+-.|+.....+........+ ..-.|.|.||.||+.|.+++.+..
T Consensus 136 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 186 (209)
T 2vkw_A 136 GGSPIRHYLVRYRALSSEWKPEIRLPSGSDHVMLKSLDWNAEYEVYVVAEN 186 (209)
T ss_dssp TTSCCCEEEEEEEETTSCCCCCEEECTTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCCceEEEEEECCCCCCceeeecCCCccEEEecCCCCCCEEEEEEEEEe
Confidence 45677777777765322222222223 335899999999999999999754
No 134
>3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens}
Probab=81.17 E-value=36 Score=33.40 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=69.1
Q ss_pred CCCCccCCcEEEEEeCC-CceeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCCCcceeccCC-ceEEEEecCccceec
Q 001120 904 LSGQPKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASP-ESVTVKVGSGDIKGL 981 (1150)
Q Consensus 904 ~~g~p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p-~~~~v~v~~~d~~~~ 981 (1150)
.+|.++.+-.|+....+ ............-.|.+.+|.|++.|.+++.+....|... .+.+ ...+..-...-..++
T Consensus 32 ~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~a~~~~g~~~--~s~~~~~~t~~~~p~~p~~~ 109 (197)
T 3lpw_A 32 DGGSKIKNYIVEKRESTRKAYSTVATNCHKTSWKVDQLQEGCSYYFRVLAENEYGIGL--PAETAESVKASERPLPPGKI 109 (197)
T ss_dssp CTTSCCCEEEEEEEETTCSSCEEEEEEECSSEEEECCCCTTCEEEEEEEEEETTEECC--CEECSSCEESCCCCCCCSCE
T ss_pred CCCCcccEEEEEEEECCCCccEEeecCCCccEEEEcCCCCCCEEEEEEEEEcCccccC--CCCCccceecCCCCCCCccc
Confidence 35566777777766543 2233333344667899999999999999999764322110 0000 011111011112233
Q ss_pred eEEEEecCCcEEEEEEEEecccc--ccccceEEEEEecCCCCceEEEEeeCCceeEEeecCCCC-cEEEEEEe
Q 001120 982 DFLVFEQPEKTILSGHVEGNRIK--ELNSHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 982 ~f~~~~~~~~~~i~g~V~~~~~~--~~~~~l~v~l~~~~~~~~v~~~~~~~~~~~f~~~~l~~~-~y~v~l~s 1051 (1150)
..... ....+.|+ =.....+ ...-...|..+...... ...... .....|.+..|.++ .|.+++.+
T Consensus 110 ~~~~~-~~~~v~l~--W~~p~~~~~~~i~~Y~v~~~~~~~~~-~~~~~~-~~~~~~~~~~L~p~t~Y~~~V~A 177 (197)
T 3lpw_A 110 TLMDV-TRNSVSLS--WEKPEHDGGSRILGYIVEMQTKGSDK-WATCAT-VKVTEATITGLIQGEEYSFRVSA 177 (197)
T ss_dssp EEEEE-CSSCEEEE--ECCCSCCTTSCCCEEEEEEEETTCSC-CEEEEE-ESSSEEEECCCCTTCEEEEEEEE
T ss_pred EEEec-cCCeEEEE--ecCCCcCCCCcccEEEEEEEeCCCCc-eEEeec-ccccEEEeCCcCCCCEEEEEEEE
Confidence 32222 12222222 1111100 12334556655543322 222122 23566889999998 68888876
No 135
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=80.45 E-value=47 Score=33.43 Aligned_cols=113 Identities=13% Similarity=0.106 Sum_probs=59.3
Q ss_pred cCCceEEEeecCCcceE-Eeecc-cccccCCCceeEEe--cCC----ceEEEEEEEEe-eeEeEEEeeE--cCCCCccCC
Q 001120 843 WAGGSFHFDNLFPGNFY-LRPLL-KEYAFSPPAQAIEL--GSG----ESREVIFQATR-VAYSATGTIT--LLSGQPKDG 911 (1150)
Q Consensus 843 ~~~G~~~f~~L~PG~Y~-~~~~~-key~~~p~~~~i~v--~~g----~~~~v~~~~~r-~~~s~~G~v~--~~~g~p~~g 911 (1150)
...-.+.+.+|.|++-| ++-.. ...-..+.+..+.+ .++ .-..+.+.... ...++.=+=. .-.+.++.+
T Consensus 61 ~~~~~~~i~~L~p~t~Y~~~V~A~n~~g~~~~S~~~~~~t~~~~P~~~P~~~~~~~~~~s~~sv~l~W~~p~~~~g~i~~ 140 (211)
T 3p4l_A 61 ATTLSYLVTGLKPNTLYEFSVMVTKGRRSSTWSMTAHGTTFELVPTSPPKDVTVVSKEGKPKTIIVNWQPPSEANGKITG 140 (211)
T ss_dssp ESSSEEEECSCCTTCEEEEEEEEEETTEECCCCCCEEEECCCCCCCSCCEEEEEEEETTEEEEEEEEEECCTTCCSCCCE
T ss_pred CCceEEEecCcCCCCEEEEEEEEEcCCCCCccceeEeeecccCCCCCCCcceEEEecCCCCCEEEEEECCCCCCCCCEEE
Confidence 34557999999999755 44322 12222232322222 222 22334333321 0122111111 112236777
Q ss_pred cEEEEEeCCCc----eeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 912 VSVEARSESKG----YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 912 v~v~~~~~~~~----~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
-.|+....+.. ..........-.|.|.||.||+.|.+++.+...
T Consensus 141 Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 188 (211)
T 3p4l_A 141 YIIYYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNS 188 (211)
T ss_dssp EEEEEESCTTSCGGGSEEEEEESSCSEEEECCCCTTCEEEEEEEEEET
T ss_pred EEEEEEECCCCCCCceEEEEecCCeeEEEEcCCCCCCEEEEEEEEEcC
Confidence 77777644321 233344556678999999999999999997543
No 136
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=80.01 E-value=9.2 Score=47.16 Aligned_cols=132 Identities=14% Similarity=0.084 Sum_probs=72.2
Q ss_pred EEEEEEeCC-CccccCeEEEEc---ce-eeeEeCCCceEEECccCCccEEEEEEecccccccee---------eEEEcCC
Q 001120 277 VGGRVVDEN-DMGVEGVKILVD---GH-ERSITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLK---------EYMVLPN 342 (1150)
Q Consensus 277 V~G~V~d~~-G~plaGA~V~l~---G~-~~~~TD~dG~f~l~~L~pG~Ytv~~~~~~y~~~~~~---------~v~v~p~ 342 (1150)
....|.|.. .-+++.+.|.|. |. ..+.|+.||..+|.++.||+|+|.+..+...-.... .+.+.-.
T Consensus 450 ~~v~vtd~~~~~~~~~~~v~l~~~~~~~~~~~t~~dg~~~~~~~~~G~Y~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (671)
T 1r6v_A 450 FQVVVTDAKGNFGVPTVFVSMMRDNGSCYYAKTGPDGIARFPHIDSGTYDIFVGGPDHWDRALAPYDGESIPGGYAIALR 529 (671)
T ss_dssp EEEEEECTTSCSBCTTEEEEEECSSSCCEEEECCTTSEEEEEEEECEEEEEEEEEECCCSCCSCTTTSCCCCCSCSSCSC
T ss_pred eEEEEecCCCCcCcceeEEEEecCCCceEecccCCCCceeeeccCceEEEEEEecccccCCCccccccccCCceeeeccc
Confidence 344666763 345677778773 32 236899999999999999999999876543221110 0000000
Q ss_pred cceeeeEEEee-------eEEEEEE------EEcC---CcccEEEEEEcCCCcceeeeeeeCCCeEEEEEEcCeeEEEEE
Q 001120 343 MASIADIKAIS-------YDICGVV------RTVG---SGNKVKVALTHGPDKVKPQVKQTDNNGNFCFEVPPGEYRLSA 406 (1150)
Q Consensus 343 ~~~i~dI~~~~-------~~V~G~V------~~~~---~~~~a~Vtl~~g~~~~~~~~~~Td~dG~f~f~L~pG~Y~l~~ 406 (1150)
......-.+.. ..+.++. .... .....++.+.+.......+.....++++|.|...+|.|.|..
T Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (671)
T 1r6v_A 530 MAEERQASFVGFGVSPDATQLNVNFNSTLQVKFSTNLSTLKDPQFVVVDPLLRGVYGRVAYARNQTYDLSLLSGQISFGI 609 (671)
T ss_dssp GGGCCEEEEEEEEEBTTBCEEEEECCCCEEEEECCCCTTSSSCEEEEECTTCSCEEEEEECCTTCEEECTTCEEEEEEEE
T ss_pred hhhhcccccccccccccceEEEEEEeeEEEEEecCcCCCCCCceEEEecCccccceEEeeeccCCceEeEecCCeEEEEE
Confidence 10000111111 1233221 1111 113445656554332223555667799999996799999988
Q ss_pred Ee
Q 001120 407 MA 408 (1150)
Q Consensus 407 ~~ 408 (1150)
..
T Consensus 610 ~~ 611 (671)
T 1r6v_A 610 QT 611 (671)
T ss_dssp EC
T ss_pred Ee
Confidence 76
No 137
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=79.98 E-value=30 Score=35.90 Aligned_cols=137 Identities=12% Similarity=0.162 Sum_probs=77.1
Q ss_pred ceEEEEEeCCCceE-EEEEeCCCceEEEcc--ccCccEEEEEEcCCceEEeecc-EEEEEcccceeeeeeeeecCcEEEE
Q 001120 99 NVNVELLSHSGDLI-SSVITSSEGSYLFKN--IIPGKYKLRASHPNLSVEVRGS-TEVELGFENGEVDDIFFAPGYEIRG 174 (1150)
Q Consensus 99 Gv~V~L~~~~g~~i-~~ttTd~~G~f~f~~--L~pG~Y~l~a~~~g~~~~~~~~-~~V~v~~~~~~~~~~l~i~g~~i~G 174 (1150)
.++|.+..++|..+ ...+-..+|.|.+.- -.+|.|.|.+...+..+. ++ ..+.+..+... .. ..+ ....=
T Consensus 45 ~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g~~i~--gSPf~v~v~~~~~~-~~-~~~--~~~~f 118 (212)
T 1qfh_A 45 PFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRGNPIK--NMPIDVKCIEGANG-ED-SSF--GSFTF 118 (212)
T ss_dssp CEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETTEECB--TCSEEEEEECCCCG-GG-CEE--EEEEE
T ss_pred eEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECCEecC--CCcceEEEccCCCC-Cc-eEE--EEEEE
Confidence 47777777666333 344456789988653 467999999998887654 33 45555432110 00 000 01111
Q ss_pred EEE--e-CCcce----eceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECccC--CeeEEEEEEEecCC
Q 001120 175 LVV--A-QGNPI----LGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVP--CGQYELVPHYKGEN 245 (1150)
Q Consensus 175 ~V~--~-~G~Pl----~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~Lp--pG~Y~v~~~~~~~~ 245 (1150)
.|. + .|++. ....+.+...++ ...+......+|.|.+.=.| +|.|.|...+.+.+
T Consensus 119 ~V~~~D~~G~~~~~G~~~l~v~i~~p~g----------------~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~~ 182 (212)
T 1qfh_A 119 TVAAKNKKGEVKTYGGDKFEVSITGPAE----------------EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKH 182 (212)
T ss_dssp EEECBCTTSSBCSSCCCCEEEEEEECCS----------------EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTEE
T ss_pred EEEEeccCCCEeecCCCcEEEEEECCCC----------------ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCEE
Confidence 222 1 24333 345566655421 12356667789988766554 79999999776543
Q ss_pred eEEEecCceEEEEEec
Q 001120 246 TVFDVSPSLVSMSVRH 261 (1150)
Q Consensus 246 ~~~~~~P~~~~vtV~~ 261 (1150)
+..+...+.|..
T Consensus 183 ----I~gSPF~v~V~~ 194 (212)
T 1qfh_A 183 ----IEGSPFKQVLGN 194 (212)
T ss_dssp ----CBTCSEEEEESC
T ss_pred ----CCCCCeEEEEcC
Confidence 444555666644
No 138
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=79.80 E-value=68 Score=35.32 Aligned_cols=51 Identities=24% Similarity=0.354 Sum_probs=34.6
Q ss_pred CCCccCCcEEEEEeCCCc-eeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 905 SGQPKDGVSVEARSESKG-YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~~~-~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+|.|+.+-.|+-...+.. .........+..|.|.+|.|++.|.+++.+...
T Consensus 223 ~g~pi~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~ 274 (389)
T 2jll_A 223 GGVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNG 274 (389)
T ss_dssp TTSCEEEEEEEEEETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEES
T ss_pred CCcceEEEEEEEEECCCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcC
Confidence 466777777776654422 222223345678999999999999999987543
No 139
>2kbg_A N-CAM 2, neural cell adhesion molecule 2; fibronectin type III module, beta-sheet sandwich, cell membrane, glycoprotein, immunoglobulin domain; NMR {Homo sapiens}
Probab=78.94 E-value=4.2 Score=38.30 Aligned_cols=50 Identities=20% Similarity=0.242 Sum_probs=37.4
Q ss_pred CCCCccCCcEEEEEeCC-C-ceeEEEeeCCCceEEecCCCCCcEEEEEEEEe
Q 001120 904 LSGQPKDGVSVEARSES-K-GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKK 953 (1150)
Q Consensus 904 ~~g~p~~gv~v~~~~~~-~-~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~ 953 (1150)
-+|.|+.+-.|+-...+ . -..+....-..-.|.|.||.||+.|.+++.+.
T Consensus 33 dggsPI~~Y~I~yr~~~~~~w~~~~~~~~~~~~~~l~~L~p~t~Y~frV~A~ 84 (114)
T 2kbg_A 33 DGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAA 84 (114)
T ss_dssp CSSSCCSEEEEEEEESSCCSCCEEEEEETTTCCEEECCCCTTCCEEEEEEEE
T ss_pred CCCCcccEEEEEEEeCCCCCcEEeEEcCCCcCEEEEcCCCCCCEEEEEEEEE
Confidence 36789999999988653 2 22333334455689999999999999999975
No 140
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=78.25 E-value=46 Score=36.26 Aligned_cols=46 Identities=15% Similarity=0.223 Sum_probs=27.4
Q ss_pred cceEEEEEeCCCceEEEEEeCCCceEEEc--cccCccEEEEEEcCCceE
Q 001120 98 SNVNVELLSHSGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSV 144 (1150)
Q Consensus 98 aGv~V~L~~~~g~~i~~ttTd~~G~f~f~--~L~pG~Y~l~a~~~g~~~ 144 (1150)
.+.+|.+...++..+ ...-..||.|.+. .-.||.|.|.....+.++
T Consensus 37 g~l~v~i~~p~~~~~-~~~d~~dGty~v~y~p~~~G~y~i~V~~~g~~i 84 (288)
T 2j3s_A 37 GGLSLSIEGPSKVDI-NTEDLEDGTCRVTYCPTEPGNYIINIKFADQHV 84 (288)
T ss_dssp CCEEEEEESSSCCEE-EEEECTTSEEEEEEECSSCEEEEEEEEETTEEC
T ss_pred CcEEEEEECCCCcee-EEEECCCCEEEEEEECCCCeEEEEEEEECCEEC
Confidence 345555554443212 2334667877554 346799999998777654
No 141
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=78.20 E-value=1.3e+02 Score=36.59 Aligned_cols=55 Identities=22% Similarity=0.154 Sum_probs=39.1
Q ss_pred EeEEEeeEcCCCCccCCcEEEEEeCCCceeEEEeeCCCceEEec--CCCCCcEEEEEEEEe
Q 001120 895 YSATGTITLLSGQPKDGVSVEARSESKGYYEETVTDTSGSYRLR--GLHPDTTYVIKVVKK 953 (1150)
Q Consensus 895 ~s~~G~v~~~~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~--gL~Pg~~y~i~~~~~ 953 (1150)
|.+.=+|+..+|.|++++.|++...+ ...+||+||...+. =..-...+.|+++..
T Consensus 338 ~~~~v~v~~~dg~P~~~~~V~v~~~~----~~~~td~~G~a~f~i~t~~~~~~l~i~~~~~ 394 (627)
T 3hrz_A 338 YELTVYVTNPDGSPAAHVPVVSEAFH----SMGTTLSDGTAKLILNIPLNAQSLPITVRTN 394 (627)
T ss_dssp EEEEEEEECTTSCBCTTCEEEEGGGT----EEEECCTTSEEEEEECCCTTCSEEEEEEEEC
T ss_pred EEEEEEEECCCCCcCCCceEEEEcCc----ceeEECCCCeEEEEEECCCCCcEEEEEEEeC
Confidence 54566677999999999999875322 56899999975544 222235788888764
No 142
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=76.86 E-value=33 Score=34.33 Aligned_cols=50 Identities=18% Similarity=0.301 Sum_probs=33.0
Q ss_pred CCccCCcEEEEEeCC--CceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 906 GQPKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
|.++.+-.|+....+ +...+.......-.|.|.||.||..|.+++.+...
T Consensus 27 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~n~ 78 (201)
T 2ha1_A 27 PSHISKYILRWRPKNSVGRWKEATIPGHLNSYTIKGLKPGVVYEGQLISIQQ 78 (201)
T ss_dssp STTCCEEEEEEEETTCSSCCEEEEECTTCCEEEECSCCTTEEEEEEEEEECT
T ss_pred CCCceEEEEEEEECCCCCceEEEecCCCccEEEecCCCCCCEEEEEEEEEec
Confidence 446666666665432 22223233334568999999999999999998643
No 143
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=76.61 E-value=95 Score=34.12 Aligned_cols=125 Identities=17% Similarity=0.174 Sum_probs=64.2
Q ss_pred CCcccceEEEEe--CCCccccceeecCCceEEEeecCCcceE-Eeeccc-ccccCCCcee-----------------EEe
Q 001120 820 GEPIPSVLLSLS--GDDGYRNNSVSWAGGSFHFDNLFPGNFY-LRPLLK-EYAFSPPAQA-----------------IEL 878 (1150)
Q Consensus 820 ~~pl~gvllsls--g~~~~r~n~~t~~~G~~~f~~L~PG~Y~-~~~~~k-ey~~~p~~~~-----------------i~v 878 (1150)
|.|+.+-.+... +...+........+..+.+.+|.|++.| ++.... ++-..+.+.. ...
T Consensus 224 g~pi~~y~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~y~~~v~A~N~~G~~~~s~~~~~~t~~~~~p~~p~~~~~~ 303 (389)
T 2jll_A 224 GVPIHHYQVDVKEVASEIWKIVRSHGVQTMVVLNNLEPNTTYEIRVAAVNGKGQGDYSKIEIFQTLPVREPSPPSIHGQP 303 (389)
T ss_dssp TSCEEEEEEEEEETTCSCCEEEECSTTCSEEEECSCCTTCEEEEEEEEEESSCBCCCCCCEEEECCCCCCCCCCCEEEEE
T ss_pred CcceEEEEEEEEECCCcccEEeeccCCcceEEECCccCCCEEEEEEEEEcCCccCCCCcceEEEecCCCCCCCCcccccc
Confidence 567765555433 3322332222345678999999999544 454321 1111111111 111
Q ss_pred cCCceEEEEEEEEeeeEeEEEeeEcCCCCccCCcEEEEEeCC-Cc-eeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 879 GSGESREVIFQATRVAYSATGTITLLSGQPKDGVSVEARSES-KG-YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 879 ~~g~~~~v~~~~~r~~~s~~G~v~~~~g~p~~gv~v~~~~~~-~~-~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
....+..|.|.. -...|.|+.+-.|+....+ .. ..........-.|.|.||.||+.|.+++.+...
T Consensus 304 ~~~~~v~l~W~~-----------p~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~~~t~Y~~~V~A~n~ 371 (389)
T 2jll_A 304 SSGKSFKLSITK-----------QDDGGAPILEYIVKYRSKDKEDQWLEKKVQGNKDHIILEHLQWTMGYEVQITAANR 371 (389)
T ss_dssp ETTTEEEEEECC-----------CCCCSSCCCEEEEEEEC-----CCBCCEECTTCCEEEECSCCTTCEEEEEEEEEC-
T ss_pred CcCCEEEEEEEC-----------CCCCCCcccEEEEEEEeCCCCcceeEeeccCCcceEEeCCcCCCCEEEEEEEEEcC
Confidence 122333333331 0123557777777776432 11 112223344557999999999999999998643
No 144
>1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I
Probab=76.22 E-value=20 Score=39.30 Aligned_cols=142 Identities=20% Similarity=0.144 Sum_probs=78.3
Q ss_pred EEEEEEeecCCccccCCCCCCcceEEEEEeCCCceE-EEEEeCCCceEEEc--cccCccEEEEEEcCCceEEeeccEEEE
Q 001120 77 LLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLI-SSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVEVRGSTEVE 153 (1150)
Q Consensus 77 IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g~~i-~~ttTd~~G~f~f~--~L~pG~Y~l~a~~~g~~~~~~~~~~V~ 153 (1150)
+.-+|.+ . |.|++|..|.....+|... .+.+||++|...+. ...+|.+.|.++..+-..... ...|+
T Consensus 23 ~tatV~D-~--------gnpv~g~~V~fs~~~G~l~~~~~~Td~~G~atvtltst~aG~~~VtA~v~~~~~~~~-a~~Vt 92 (282)
T 1f00_I 23 YTVKVMK-G--------DKPVSNQEVTFTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSDVAVDVK-APEVE 92 (282)
T ss_dssp EEEEEEE-T--------TEECTTCEEEEEESSSEESCSEEECCTTSEEEEEEECSSCEEECEEEEETTCCCCEE-CCCEE
T ss_pred EEEEEEE-C--------CcccCCcEEEEEcCCCccccceeEECCCcEEEEEEEcCCceEEEEEEEECCCccccc-cccce
Confidence 4556765 2 5899999999988778432 46789999998854 558899999998765211111 11222
Q ss_pred Ecccceeeee-eeeecCcEEEEEEEeCCcceeceEEEEEECCCCcccCCCCCCCcccccceeeEEEeC-CCceEEECccC
Q 001120 154 LGFENGEVDD-IFFAPGYEIRGLVVAQGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSD-ADGKFMFKSVP 231 (1150)
Q Consensus 154 v~~~~~~~~~-~l~i~g~~i~G~V~~~G~Pl~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TD-a~G~f~f~~Lp 231 (1150)
.-.. ..+.. .+.+.|....|. .....+.++.|.|...+... ......+ .-..+..| ++|..+|..
T Consensus 93 Fva~-~~i~~~~v~vng~~adg~--~p~t~~~~a~~~l~~~~~n~------~ytWsSs--~~~~~sVd~~~G~Vt~~~-- 159 (282)
T 1f00_I 93 FFTT-LTIDDGNIEIVGTGVKGK--LPTVWLQYGQVNLKASGGNG------KYTWRSA--NPAIASVDASSGQVTLKE-- 159 (282)
T ss_dssp EECC-CEECTTCEEETTTCCEES--CCSEEETTCEEECCEESTTS------CEEEEES--CTTTEEECTTTCEEEECS--
T ss_pred eecc-cccccceeeecccccCcc--CCcccccceEEEEEecCCcc------eEEEecc--CCceEEEcCCCceEEECC--
Confidence 2111 11111 122223211111 11234667788876553210 0000000 00124578 899999865
Q ss_pred CeeEEEEEEE
Q 001120 232 CGQYELVPHY 241 (1150)
Q Consensus 232 pG~Y~v~~~~ 241 (1150)
.|+-+|.+..
T Consensus 160 ~GtvtITats 169 (282)
T 1f00_I 160 KGTTTISVIS 169 (282)
T ss_dssp SSCEEEEEEE
T ss_pred CceEEEEEEc
Confidence 7888888753
No 145
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=75.61 E-value=14 Score=38.69 Aligned_cols=84 Identities=15% Similarity=0.277 Sum_probs=49.9
Q ss_pred cEEEeceEEEEEEEeCCCccc-----cCeEEEE--c----cee-eeEeCCCceEEECccCCccEEEEEEecccccc--ce
Q 001120 269 KFQVTGFSVGGRVVDENDMGV-----EGVKILV--D----GHE-RSITDRDGYYKLDQVTSNRYTIEAVKVHYKFN--KL 334 (1150)
Q Consensus 269 ~f~~~g~sV~G~V~d~~G~pl-----aGA~V~l--~----G~~-~~~TD~dG~f~l~~L~pG~Ytv~~~~~~y~~~--~~ 334 (1150)
++..+...+.|+|+. +|+|| .|+++.+ . ... -.....||.|+ ..|=.|+|.|.......-|. ..
T Consensus 5 NYDeP~a~l~G~iv~-tGE~i~~~~~~gv~i~l~E~gy~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~gnGPf~~~~~ 82 (215)
T 3hn5_A 5 NYDAPESMLTGRVMY-NGEALQLRGNEAVQLQLYQHGYAKHDPINVYVNQDGMYS-ANLFDGEYQMITKSGNGPWTSEGR 82 (215)
T ss_dssp -----CEEEEEEEEE-TTEECCCCCTTSCEEEEESSCGGGCCCEEEEBCTTSEEE-EEECSEEEEEEECTTCSSBCSTTC
T ss_pred CCCCCCceEEEEEEE-CCCEeeecCCCceEEEEEEcccCCCCCeeEEEcCCCcEE-EEEECceeEEEEecCCCCcccCCC
Confidence 355566789999994 45554 4588888 1 122 25788999999 79999999999875433233 22
Q ss_pred eeEEEcCCcceeeeEEEeee
Q 001120 335 KEYMVLPNMASIADIKAISY 354 (1150)
Q Consensus 335 ~~v~v~p~~~~i~dI~~~~~ 354 (1150)
..+.+..+.....|+.+..|
T Consensus 83 dti~v~i~G~t~~DfeVtPY 102 (215)
T 3hn5_A 83 DTINVTVAGNTVQDVEVTPY 102 (215)
T ss_dssp CCEEEEESSSEECCEECCBS
T ss_pred CeEEEEECCCeEEeEEEeee
Confidence 22233323334456665555
No 146
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=75.14 E-value=6.2 Score=40.17 Aligned_cols=50 Identities=20% Similarity=0.300 Sum_probs=32.8
Q ss_pred CCccCCcEEEEEeCC--CceeEEEeeC-CCceEEecCCCCCcEEEEEEEEecC
Q 001120 906 GQPKDGVSVEARSES--KGYYEETVTD-TSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~--~~~~~~~~Td-~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+.++.+-.|+....+ +......... ..-.|.|.||.||+.|.+++.+...
T Consensus 144 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 196 (214)
T 2ibg_A 144 EHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKLQSFSA 196 (214)
T ss_dssp GGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEEEEECS
T ss_pred CCCcceEEEEEEECCCCcceEEeeccCCcceEEEeCCCCCCCEEEEEEEEEcC
Confidence 346667777766433 2222222222 2468999999999999999998643
No 147
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=74.72 E-value=1.1e+02 Score=37.56 Aligned_cols=25 Identities=28% Similarity=0.357 Sum_probs=21.1
Q ss_pred CCceEEecCCCCCcEEEEEEEEecC
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
..-.|.|.||.|++.|.|++.+...
T Consensus 332 ~~~~~~l~~L~p~t~Y~~~V~A~n~ 356 (680)
T 1zlg_A 332 FQNSVILEKLQPDCDYVVELQAITY 356 (680)
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEEC
Confidence 3368999999999999999997543
No 148
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=74.61 E-value=78 Score=32.18 Aligned_cols=25 Identities=8% Similarity=0.131 Sum_probs=19.0
Q ss_pred eeeeCCCeEEEEE---EcCeeEEEEEEe
Q 001120 384 VKQTDNNGNFCFE---VPPGEYRLSAMA 408 (1150)
Q Consensus 384 ~~~Td~dG~f~f~---L~pG~Y~l~~~~ 408 (1150)
..+-..||.|.+. -.+|.|+|.+..
T Consensus 51 ~v~d~~dgty~v~y~P~~~G~h~i~V~~ 78 (188)
T 2k7p_A 51 TITDNKDGTVTVRYAPSEAGLHEMDIRY 78 (188)
T ss_dssp EEEECSSSEEEEEECCCCCEEEEEEEEE
T ss_pred EEEeCCCCEEEEEEEccccEeEEEEEEE
Confidence 3344678988877 456999999987
No 149
>3rfz_B Outer membrane usher protein, type 1 fimbrial SYN; beta-barrel, pilus assembly, outer-membrane, cell adhesion-T protein-chaperone complex; 2.80A {Escherichia coli} PDB: 3ohn_A 1zdv_A
Probab=74.34 E-value=11 Score=47.80 Aligned_cols=104 Identities=17% Similarity=0.103 Sum_probs=81.6
Q ss_pred eeecCCceEEEeecCCcceE---Eee--cccccccCCCceeEEecCCceEEEEEEEEeeeEeEEEeeEcCCCCccC-CcE
Q 001120 840 SVSWAGGSFHFDNLFPGNFY---LRP--LLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPKD-GVS 913 (1150)
Q Consensus 840 ~~t~~~G~~~f~~L~PG~Y~---~~~--~~key~~~p~~~~i~v~~g~~~~v~~~~~r~~~s~~G~v~~~~g~p~~-gv~ 913 (1150)
..||..|...+-.|.|=+.- |-+ +..+.++.-..+.|...+|.-..+.|...+ ...+..+++.. |+|+| |+.
T Consensus 692 ~~Td~~G~avvp~l~pY~~N~i~iD~~~Lp~dvel~~t~~~v~P~~GAvv~~~F~~~~-g~~~l~~l~~~-G~~lPfGa~ 769 (843)
T 3rfz_B 692 VRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVPTRGAIVRAEFKARV-GIKLLMTLTHN-NKPLPFGAM 769 (843)
T ss_dssp CBCCTTSEEEESCCCTTSCEEEEBCGGGSCTTEEESCSEEEECBCTTCEEEEECCEEE-SEEEEEEEEET-TEECCTTCE
T ss_pred ceECCCCeEEECCCCcccccEEEEcCCCCCCCEEEeccEEEEEECCCCEEEEEEEEEe-eEEEEEEEeeC-CCCCCCceE
Confidence 56999999999999986544 333 335688888999999999999999997654 56678889988 99998 888
Q ss_pred EEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEE
Q 001120 914 VEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVV 951 (1150)
Q Consensus 914 v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~ 951 (1150)
|. +.++ ........+|+.-|+||.|+.. +.++
T Consensus 770 V~--~~~~--~~~giVg~~G~vyl~gl~~~~~--L~V~ 801 (843)
T 3rfz_B 770 VT--SESS--QSSGIVADNGQVYLSGMPLAGK--VQVK 801 (843)
T ss_dssp EE--ESSS--SCEEECCGGGEEEEEEECSEEE--EEEE
T ss_pred EE--cCCC--cEEEEEcCCCEEEEEcCCCCcE--EEEE
Confidence 75 4332 2467899999999999988864 4454
No 150
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=73.77 E-value=3.6 Score=39.10 Aligned_cols=43 Identities=21% Similarity=0.418 Sum_probs=33.3
Q ss_pred EEEeeEcCCCCc--cCCcEEEEEeCC------CceeEEEeeCCCceEEecCC
Q 001120 897 ATGTITLLSGQP--KDGVSVEARSES------KGYYEETVTDTSGSYRLRGL 940 (1150)
Q Consensus 897 ~~G~v~~~~g~p--~~gv~v~~~~~~------~~~~~~~~Td~~G~~~i~gL 940 (1150)
+.|++.. +|+| .++|.|+..+.. ....+++.||++|+|.|.|-
T Consensus 7 V~G~L~C-~~~Pa~~~~V~V~L~d~~~~~~d~Ddll~~~~Td~~G~F~l~G~ 57 (117)
T 3uaf_A 7 ATGVLKC-PTDPEAVKKVHIDLWDAAAAAAESDDLMGRTWSDRNGNFQVTGC 57 (117)
T ss_dssp EEEEEEC-TTCGGGGSSCEEEEEEHHHHHTTSCCEEEEEECCTTSEEEEEEE
T ss_pred EEEEEEe-CCccCCCCCEEEEEEecccccCCchHhheeeEECCCCEEEEEEE
Confidence 4677764 6778 558999888621 45788999999999999984
No 151
>2l4o_A Cell WALL surface anchor family protein; RRGB, pilus, cell adhesion; NMR {Streptococcus pneumoniae}
Probab=72.40 E-value=2 Score=44.00 Aligned_cols=24 Identities=33% Similarity=0.577 Sum_probs=21.4
Q ss_pred EeCCCceEEEcccc-Ccc-EEEEEEcC
Q 001120 116 ITSSEGSYLFKNII-PGK-YKLRASHP 140 (1150)
Q Consensus 116 tTd~~G~f~f~~L~-pG~-Y~l~a~~~ 140 (1150)
+|+++| ..|.+++ .|. |.|.+.+.
T Consensus 103 ~T~~dG-~~F~~l~~~G~~Yl~vE~~~ 128 (181)
T 2l4o_A 103 LTEAEG-AKFNTANLPAAKYKIYEIHS 128 (181)
T ss_dssp ECCSSC-EEEECTTSCSSEEEEEECTT
T ss_pred eeCCCC-EEeecCccCCceEEEEEccC
Confidence 789999 9999998 899 99999763
No 152
>2cum_A Tenascin-X; hexabrachion-like, fibronectin type III domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=72.36 E-value=15 Score=33.27 Aligned_cols=24 Identities=29% Similarity=0.317 Sum_probs=20.9
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|+||.||+.|.|++.+..
T Consensus 57 ~~ts~~l~~L~p~t~Y~~~V~A~~ 80 (105)
T 2cum_A 57 GITSHQLLGLFPSTSYNARLQAMW 80 (105)
T ss_dssp SCSEEEECSCCTTCEEEEEEEEEB
T ss_pred CccEEEECCCCCCCEEEEEEEEEe
Confidence 445899999999999999999864
No 153
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=71.92 E-value=82 Score=42.92 Aligned_cols=55 Identities=24% Similarity=0.199 Sum_probs=37.0
Q ss_pred EeEEEeeEcCCCCccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCC--CcEEEEEEEEe
Q 001120 895 YSATGTITLLSGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHP--DTTYVIKVVKK 953 (1150)
Q Consensus 895 ~s~~G~v~~~~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~P--g~~y~i~~~~~ 953 (1150)
|.+.=+|+..+|+|++++.|++...+ ...+||+||...+.=-.| ...+.|+++..
T Consensus 360 ~~~~v~v~~~dg~P~~~~~V~v~~~~----~~~tTd~~G~a~f~i~t~~~~~~l~i~~~~~ 416 (1642)
T 3prx_B 360 YELTVYVTNPDGSPAAHVPVVSEAFH----SMGTTLSDGTAKLILNIPLNAQSLPITVRTN 416 (1642)
T ss_dssp EEEEEEEECTTSCBCCSCEEEEGGGT----EEEECCTTSEEEEEECCCTTCCCCEEEEECC
T ss_pred EEEEEEEECCCCCCCCCceEEEEecc----ceeeeCCCceEEEEEECCCCCcEEEEEEEEc
Confidence 43444567899999999999875322 457899999766552222 24567777753
No 154
>2ha1_A Fibronectin; beta sandwich, protein-protein complex, rigid BODY docking, cell adhesion, structural protein; NMR {Homo sapiens}
Probab=70.11 E-value=47 Score=33.17 Aligned_cols=47 Identities=19% Similarity=0.238 Sum_probs=30.7
Q ss_pred ccCCcEEEEEeCC--CceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 908 PKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 908 p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
++.+-.|+....+ ............-.|.|.||.||+.|.|++.+..
T Consensus 138 ~i~~Y~v~~~~~~~~~~~~~~~v~~~~~~~~i~~L~p~t~Y~~~V~A~~ 186 (201)
T 2ha1_A 138 TVSGFRVEYELSEEGDEPQYLDLPSTATSVNIPDLLPGRKYIVNVYQIS 186 (201)
T ss_dssp TEEEEEEEEEETTTCCCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CccEEEEEEEECCCCCceeEEEcCCceeEEEeCCCCCCCEEEEEEEEEc
Confidence 4555555555322 2222333344556899999999999999999754
No 155
>1wfu_A Unnamed protein product; FN3 domain, similar to 1700007B22RIK protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.2.1
Probab=69.71 E-value=11 Score=35.77 Aligned_cols=52 Identities=21% Similarity=0.190 Sum_probs=33.7
Q ss_pred CCc-cCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCC
Q 001120 906 GQP-KDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFG 957 (1150)
Q Consensus 906 g~p-~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~ 957 (1150)
|.+ +-+-.||..+.+........+-..=.|.|.||.||+.|.+++++....|
T Consensus 47 g~~~I~~Y~ve~~~~~~~~~~~v~~~~~t~~~v~gL~p~t~Y~frV~A~n~~G 99 (120)
T 1wfu_A 47 PQEQWLRFSIEEEDPKMHSYGVIYTGYATRHVVEGLEPRTLYKFRLKVTSPSG 99 (120)
T ss_dssp CGGGCCEEEEEEECTTTCCEEEEEEESCSEEEEESCCTTCEEEEEEEEECSSS
T ss_pred CCCceEEEEEEEecCCCCceEEEecCCccEEEECCCCCCCEEEEEEEEECCCC
Confidence 455 6788888433332222223333344699999999999999999864433
No 156
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=68.77 E-value=1.2e+02 Score=31.86 Aligned_cols=133 Identities=11% Similarity=0.063 Sum_probs=66.3
Q ss_pred ccCCcEEEEEeCCCc-----eeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCCCcceeccCCceEEEEecCcc----c
Q 001120 908 PKDGVSVEARSESKG-----YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGD----I 978 (1150)
Q Consensus 908 p~~gv~v~~~~~~~~-----~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d----~ 978 (1150)
++.+-.|+....... ..........-.|.+.||.|++.|.+++.+....| ...|....+. ..++ .
T Consensus 127 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~~g-----~g~~~~~~~~-t~~~~P~~~ 200 (290)
T 3l5i_A 127 SVKKYILEWCVLSDKAPCITDWQQEDGTVHRTYLRGNLAESKCYLITVTPVYADG-----PGSPESIKAY-LKQAPPSKG 200 (290)
T ss_dssp CCCEEEEEEEEECSSSCCCCEEEEEETTCSEEECCSCCCTTCEEEEEEEEEETTE-----ECCCEEEEEE-SSCCCCSSC
T ss_pred CCCcEEEEEEECCCCCCCCcCeEEccCCCcceEEecCcCCccEEEEEEEEEeCCc-----ccccEEEEeE-ccccCCCCC
Confidence 566666665532211 12223344456788899999999999999754322 1123333333 2222 1
Q ss_pred eeceEEEEecCCcEEEEEEEEecc---ccccccceEEEEEecCCCCceEEEEeeCCceeEEeecCCCC-cEEEEEEe
Q 001120 979 KGLDFLVFEQPEKTILSGHVEGNR---IKELNSHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 979 ~~~~f~~~~~~~~~~i~g~V~~~~---~~~~~~~l~v~l~~~~~~~~v~~~~~~~~~~~f~~~~l~~~-~y~v~l~s 1051 (1150)
-++..... ....+.|+ =.... ..-.+...+|..+...... .....-.....|.+..|.+| .|.+++..
T Consensus 201 p~~~~~~~-~~~sv~l~--W~~~~~~~~~g~i~~Y~v~~~~~~~~~--~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A 272 (290)
T 3l5i_A 201 PTVRTKKV-GKNEAVLE--WDQLPVDVQNGFIRNYTIFYRTIIGNE--TAVNVDSSHTEYTLSSLTSDTLYMVRMAA 272 (290)
T ss_dssp CCEEEEEE-CSSCEEEE--ECCCCHHHHSSCCCEEEEEEEETTSCC--EEEEEETTCSEEEECSCCTTCEEEEEEEE
T ss_pred CeeeEeec-cCCEEEEE--EcCCChhccCCEEEEEEEEEEeCCCCe--EEEEeCCCceEEEeCCCCCCCEEEEEEEE
Confidence 22322222 12222222 11001 0112345566666543222 22111234557999999999 59988875
No 157
>2ibg_A CG9211-PA, GH03927P; IHOG, fibronectin type III, protein binding; 2.20A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1 PDB: 2ibb_A
Probab=67.55 E-value=42 Score=33.74 Aligned_cols=22 Identities=18% Similarity=0.311 Sum_probs=19.2
Q ss_pred ceEEecCCCCCcEEEEEEEEec
Q 001120 933 GSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 933 G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
-.|.|.||.|++.|.+++.+..
T Consensus 70 ~~~~i~~L~p~t~Y~~~V~A~n 91 (214)
T 2ibg_A 70 FTASVTDLKPQHTYRFRILAVY 91 (214)
T ss_dssp EEEEECSCCTTCEEEEEEEEEE
T ss_pred eeEEecCCcCCCEEEEEEEEEe
Confidence 3689999999999999999753
No 158
>3rfz_B Outer membrane usher protein, type 1 fimbrial SYN; beta-barrel, pilus assembly, outer-membrane, cell adhesion-T protein-chaperone complex; 2.80A {Escherichia coli} PDB: 3ohn_A 1zdv_A
Probab=67.41 E-value=23 Score=44.84 Aligned_cols=106 Identities=8% Similarity=0.111 Sum_probs=69.2
Q ss_pred EEeCCCceEEECccCCee-EEEEEEEecCCeEEEecCceEEEEEeccceeeeccEEE-eceEEEEEEEeCCCcccc-CeE
Q 001120 217 AVSDADGKFMFKSVPCGQ-YELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQV-TGFSVGGRVVDENDMGVE-GVK 293 (1150)
Q Consensus 217 a~TDa~G~f~f~~LppG~-Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~-~g~sV~G~V~d~~G~pla-GA~ 293 (1150)
+.||..|.-.++.|.|=. -+|...-..-+...++.-....+....+.+... .|.+ .+..+-.++.++ |+||+ ||.
T Consensus 692 ~~Td~~G~avvp~l~pY~~N~i~iD~~~Lp~dvel~~t~~~v~P~~GAvv~~-~F~~~~g~~~l~~l~~~-G~~lPfGa~ 769 (843)
T 3rfz_B 692 VRTDWRGYAVLPYATEYRENRVALDTNTLADNVDLDNAVANVVPTRGAIVRA-EFKARVGIKLLMTLTHN-NKPLPFGAM 769 (843)
T ss_dssp CBCCTTSEEEESCCCTTSCEEEEBCGGGSCTTEEESCSEEEECBCTTCEEEE-ECCEEESEEEEEEEEET-TEECCTTCE
T ss_pred ceECCCCeEEECCCCcccccEEEEcCCCCCCCEEEeccEEEEEECCCCEEEE-EEEEEeeEEEEEEEeeC-CCCCCCceE
Confidence 679999999999998743 334432111111233333444444444443332 3443 456677788899 99999 899
Q ss_pred EEE-cceeeeEeCCCceEEECccCCccEEEEEE
Q 001120 294 ILV-DGHERSITDRDGYYKLDQVTSNRYTIEAV 325 (1150)
Q Consensus 294 V~l-~G~~~~~TD~dG~f~l~~L~pG~Ytv~~~ 325 (1150)
|.- +|+.+...+.+|.+-|.+|+++. +|.++
T Consensus 770 V~~~~~~~~giVg~~G~vyl~gl~~~~-~L~V~ 801 (843)
T 3rfz_B 770 VTSESSQSSGIVADNGQVYLSGMPLAG-KVQVK 801 (843)
T ss_dssp EEESSSSCEEECCGGGEEEEEEECSEE-EEEEE
T ss_pred EEcCCCcEEEEEcCCCEEEEEcCCCCc-EEEEE
Confidence 876 46667899999999999998853 45554
No 159
>2rb8_A Tenascin; beta sheet,loop design, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix, glycoprotein; 1.45A {Homo sapiens} PDB: 2rbl_A 1ten_A
Probab=66.73 E-value=40 Score=30.23 Aligned_cols=26 Identities=27% Similarity=0.662 Sum_probs=21.6
Q ss_pred eCCCceEEecCCCCCcEEEEEEEEec
Q 001120 929 TDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 929 Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.-..-.|.|.||.||+.|.|++.+..
T Consensus 52 ~~~~~~~~l~~L~p~t~Y~~~V~A~~ 77 (104)
T 2rb8_A 52 TEDENQYSIGNLKPDTEYEVSLISRR 77 (104)
T ss_dssp ETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 33456799999999999999999753
No 160
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=66.70 E-value=24 Score=34.31 Aligned_cols=45 Identities=27% Similarity=0.535 Sum_probs=31.9
Q ss_pred CCCcceEEEEEeCCCceEEEEE--eCCCc--eEEEc-------cccCccEEEEEEc
Q 001120 95 GGPSNVNVELLSHSGDLISSVI--TSSEG--SYLFK-------NIIPGKYKLRASH 139 (1150)
Q Consensus 95 ~plaGv~V~L~~~~g~~i~~tt--Td~~G--~f~f~-------~L~pG~Y~l~a~~ 139 (1150)
.+...++|++++.+|+++++.. .-+.| .|.++ .+++|.|++++.+
T Consensus 34 ~~a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a 89 (138)
T 3osv_A 34 VSSSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQT 89 (138)
T ss_dssp BCEEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEE
T ss_pred CCCcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEE
Confidence 3456799999999998876643 23557 45555 3889999998744
No 161
>3b83_A Ten-D3; beta sheet, computational redesigned protein, alternative splicing, cell adhesion, coiled coil, EGF-like domain, extracellular matrix; 2.40A {Homo sapiens}
Probab=66.67 E-value=28 Score=31.01 Aligned_cols=26 Identities=38% Similarity=0.649 Sum_probs=21.7
Q ss_pred eCCCceEEecCCCCCcEEEEEEEEec
Q 001120 929 TDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 929 Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.-..-.|.|.||.||+.|.+++.+..
T Consensus 51 ~~~~t~~~i~~L~p~t~Y~~~V~A~n 76 (100)
T 3b83_A 51 TSSITSLTLTNLEPNTTYEIRIVARN 76 (100)
T ss_dssp CTTEEEEEECSCCTTCEEEEEEEEEE
T ss_pred CCcceEEEECCCCCCCEEEEEEEEEe
Confidence 34455799999999999999999864
No 162
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=66.60 E-value=1.2e+02 Score=31.02 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=29.8
Q ss_pred ccCCcEEEEEeCC-CceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 908 PKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 908 p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
++.+-.|+....+ ............-.|.|.||.|++.|.+++.+..
T Consensus 32 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 79 (234)
T 3f7q_A 32 KPMGYRVKYWIQGDSESEAHLLDSKVPSVELTNLYPYCDYEMKVCAYG 79 (234)
T ss_dssp CCCEEEEEEEETTSCGGGCEEEEESSSEEEECSCCTTCEEEEEEEEEE
T ss_pred ccceEEEEEEECCCCccceEEEcCCccEEEECCCCCCCEEEEEEEEEe
Confidence 4455555554332 1111223334566899999999999999999753
No 163
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=66.57 E-value=12 Score=34.36 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=36.2
Q ss_pred eEEEEEEEeCCCccccCeEEEEcceeeeE-eCCCceEEECccCCccEEEEEEecc
Q 001120 275 FSVGGRVVDENDMGVEGVKILVDGHERSI-TDRDGYYKLDQVTSNRYTIEAVKVH 328 (1150)
Q Consensus 275 ~sV~G~V~d~~G~plaGA~V~l~G~~~~~-TD~dG~f~l~~L~pG~Ytv~~~~~~ 328 (1150)
..|.+...|.+| .|..++|.+||..+.. |-+-=.|.+... +|.|+|++++-.
T Consensus 19 v~i~a~A~D~dg-~V~kVef~vdg~~vg~dt~apy~~~w~~~-~G~htl~a~AtD 71 (98)
T 3pe9_A 19 LKITATASDSDG-KISRVDFLVDGEVIGSDREAPYEYEWKAV-EGNHEISVIAYD 71 (98)
T ss_dssp EEEEEEECCSSS-CEEEEEEEETTEEEEEECSSSEEEEEECC-SEEEEEEEEEEE
T ss_pred EEEEEEEEeCCC-CEEEEEEEECCEEecccccCCEEEEEEcC-CccEEEEEEEEE
Confidence 356666666655 7999999999987753 222225566555 899999988743
No 164
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=66.33 E-value=1.4e+02 Score=40.77 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=38.4
Q ss_pred EeEEEeeEcCCCCccCCcEEEEEeCCC---ce------eEEEeeCCCc--eEEecCCCCC-cEEEEEEEEec
Q 001120 895 YSATGTITLLSGQPKDGVSVEARSESK---GY------YEETVTDTSG--SYRLRGLHPD-TTYVIKVVKKD 954 (1150)
Q Consensus 895 ~s~~G~v~~~~g~p~~gv~v~~~~~~~---~~------~~~~~Td~~G--~~~i~gL~Pg-~~y~i~~~~~~ 954 (1150)
|.+.=.+...+|+|++++.|++..... .+ ....+||++| .|.|. +..+ .+|.|+++..+
T Consensus 369 ~~~~v~~~~~dG~p~~~~~v~l~~~~~~~~~~~~~~~~~~~~~t~~~G~~~~~~~-~~~~~~~~~l~v~~~d 439 (1676)
T 3cu7_A 369 YPIKVQVKDSLDQLVGGVPVTLNAQTIDVNQETSDLDPSKSVTRVDDGVASFVLN-LPSGVTVLEFNVKTDA 439 (1676)
T ss_dssp EEEEEEEEETTCCBCCSCEEEEEEEEEETTSCEEECCCEEEECCSSSCEEEEEEC-CCTTEEEEEEEEEECC
T ss_pred EEEEEEEEcCCCCccCcceEEEeccccccccccccccccceeEECCCCeEEEEEE-CCCCCeEEEEEEEEcc
Confidence 334445668999999999988764221 11 3367899999 56665 4334 35788888643
No 165
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=66.12 E-value=33 Score=35.60 Aligned_cols=53 Identities=15% Similarity=0.270 Sum_probs=38.1
Q ss_pred EeceEEEEEEEeCCCccc----cCeEEEE--cc-----eeeeEeCCCceEEECccCCccEEEEEEe
Q 001120 272 VTGFSVGGRVVDENDMGV----EGVKILV--DG-----HERSITDRDGYYKLDQVTSNRYTIEAVK 326 (1150)
Q Consensus 272 ~~g~sV~G~V~d~~G~pl----aGA~V~l--~G-----~~~~~TD~dG~f~l~~L~pG~Ytv~~~~ 326 (1150)
.+...+.|+|+. +|+|+ .|+++.| .| ..-.....||.|+ ..|=.|+|.|....
T Consensus 5 ~P~a~l~G~iv~-tgE~i~~~~~gv~i~l~e~g~~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~ 68 (202)
T 4fxt_A 5 EPKATLTGKAIY-DGEAVGVRSGSSEFALFQDGYALKGSIPVYIAQDGSYS-VSLFNGDYKLVRMG 68 (202)
T ss_dssp -CEEEEEEEEEE-TTEECBCCTTTEEEEEECCC----CCEEEEBCTTSEEE-EEEESEEEEEEEEE
T ss_pred CCCceEEEEEEE-CCCEeeecCCceEEEEEEcccCCCCCeeEEEcCCCcEE-EEEEcceeEEEECC
Confidence 344678999984 45554 4788888 22 1225788999999 89999999999543
No 166
>3qht_C Monobody YSMB-1; fibronectin type III, yeast small ubiquitin-like modifier, S NOVO protein; 2.40A {Artificial gene}
Probab=65.98 E-value=14 Score=32.80 Aligned_cols=46 Identities=22% Similarity=0.211 Sum_probs=29.5
Q ss_pred cCCcEEEEEeCCCc--eeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 909 KDGVSVEARSESKG--YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 909 ~~gv~v~~~~~~~~--~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
+.+-.|+-...++. ..+.......-.|.|.||.||+.|.|++.+..
T Consensus 32 i~~Y~v~y~~~~~~~~~~~~~v~~~~t~~~l~~L~p~t~Y~v~V~A~~ 79 (97)
T 3qht_C 32 VSYYRITYGETGGNSPVQEFTVPGSSSTATISGLSPGVDYTITVYAYY 79 (97)
T ss_dssp CCEEEEEEEESSSCSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred CCEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 44444444433221 23333444566899999999999999999753
No 167
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=65.73 E-value=55 Score=40.27 Aligned_cols=139 Identities=17% Similarity=0.178 Sum_probs=75.6
Q ss_pred EEEEEecCCCCCcccceEEEEeCCCccccceeecCCceEEEeecCCcceEEeecccccccCC-C---------ceeEEec
Q 001120 810 SVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSP-P---------AQAIELG 879 (1150)
Q Consensus 810 ~v~v~~~~~~~~pl~gvllslsg~~~~r~n~~t~~~G~~~f~~L~PG~Y~~~~~~key~~~p-~---------~~~i~v~ 879 (1150)
.+.+.|.. ..-+++.+.++|.+.++-+--..|+.+|.+.|..|.||+|.|..--.+..-.+ . .-++-++
T Consensus 451 ~v~vtd~~-~~~~~~~~~v~l~~~~~~~~~~~t~~dg~~~~~~~~~G~Y~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (671)
T 1r6v_A 451 QVVVTDAK-GNFGVPTVFVSMMRDNGSCYYAKTGPDGIARFPHIDSGTYDIFVGGPDHWDRALAPYDGESIPGGYAIALR 529 (671)
T ss_dssp EEEEECTT-SCSBCTTEEEEEECSSSCCEEEECCTTSEEEEEEEECEEEEEEEEEECCCSCCSCTTTSCCCCCSCSSCSC
T ss_pred EEEEecCC-CCcCcceeEEEEecCCCceEecccCCCCceeeeccCceEEEEEEecccccCCCccccccccCCceeeeccc
Confidence 35666653 24567788899998754222345778999999999999998865322211111 0 0001111
Q ss_pred CCceEEEEEEEE---e------eeEeEEEeeEcCCCCc--cCCcEEEEEeCC-CceeEEEeeCCCceEEecCCCCCcEEE
Q 001120 880 SGESREVIFQAT---R------VAYSATGTITLLSGQP--KDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYV 947 (1150)
Q Consensus 880 ~g~~~~v~~~~~---r------~~~s~~G~v~~~~g~p--~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~Pg~~y~ 947 (1150)
.-+...-.|.+. . ..|+-.=+|. +...+ ++.+.+-..+.. ...++.....+|++|.++-+ ||. |.
T Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 606 (671)
T 1r6v_A 530 MAEERQASFVGFGVSPDATQLNVNFNSTLQVK-FSTNLSTLKDPQFVVVDPLLRGVYGRVAYARNQTYDLSLL-SGQ-IS 606 (671)
T ss_dssp GGGCCEEEEEEEEEBTTBCEEEEECCCCEEEE-ECCCCTTSSSCEEEEECTTCSCEEEEEECCTTCEEECTTC-EEE-EE
T ss_pred hhhhcccccccccccccceEEEEEEeeEEEEE-ecCcCCCCCCceEEEecCccccceEEeeeccCCceEeEec-CCe-EE
Confidence 111122222221 1 1222211122 33333 355565555544 33566677888999999955 995 66
Q ss_pred EEEEE
Q 001120 948 IKVVK 952 (1150)
Q Consensus 948 i~~~~ 952 (1150)
|.+..
T Consensus 607 ~~~~~ 611 (671)
T 1r6v_A 607 FGIQT 611 (671)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 67763
No 168
>2crm_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=65.14 E-value=11 Score=34.62 Aligned_cols=49 Identities=18% Similarity=0.198 Sum_probs=34.9
Q ss_pred CCccCCcEEEEEeCCC-ceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 906 GQPKDGVSVEARSESK-GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~~-~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
|.++.+-.|+...... .......+...-.|.|.||.||+.|.+++.+..
T Consensus 47 g~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n 96 (120)
T 2crm_A 47 GATINKYVVEMAEGSNGNKWEMIYSGATREHLCDRLNPGCFYRLRVYCIS 96 (120)
T ss_dssp SSCCCEEEEEEEESSSSCCCEEEECSSCSEEEECSCCTTSCEEEEEEEEE
T ss_pred CCeeeEEEEEEccCCCCcCCEEEEeccccEEEECCCCCCCEEEEEEEEEc
Confidence 5678888888775432 222233334567899999999999999999854
No 169
>3teu_A Fibcon; FN3 domain, fibronectin TPYE III domain, consensus design, S de novo protein; HET: DIO; 1.00A {Synthetic}
Probab=64.26 E-value=30 Score=30.41 Aligned_cols=47 Identities=26% Similarity=0.307 Sum_probs=30.5
Q ss_pred ccCCcEEEEEeCC--CceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 908 PKDGVSVEARSES--KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 908 p~~gv~v~~~~~~--~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
++.+-.|+....+ +........-..-.|.|.||.||+.|.+++.+..
T Consensus 28 ~i~~Y~v~y~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 76 (98)
T 3teu_A 28 TITGYRITYTPSNGPGEPKELTVPPSSTSVTITGLTPGVEYVVSVYALK 76 (98)
T ss_dssp CCSEEEEEEEETTSCSCCEEEEECTTCSEEEECSCCTTCEEEEEEEEEE
T ss_pred cccEEEEEEEECCCCCceEEEEcCCCcCEEEecCCCCCCEEEEEEEEEe
Confidence 4455555555322 2223333344566899999999999999999754
No 170
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=64.25 E-value=27 Score=36.74 Aligned_cols=31 Identities=26% Similarity=0.377 Sum_probs=24.5
Q ss_pred EeeCCCc-eEEecCCCCCcEEEEEEEEecCCC
Q 001120 927 TVTDTSG-SYRLRGLHPDTTYVIKVVKKDGFG 957 (1150)
Q Consensus 927 ~~Td~~G-~~~i~gL~Pg~~y~i~~~~~~~~~ 957 (1150)
...+.++ .|.+.||.|++.|..++++.+..|
T Consensus 193 ~~v~~~~tsyt~~gLk~~TeYsF~V~A~d~~G 224 (238)
T 2w1n_A 193 AEIGKDETSYTFKKLNRHTIYNFKIAAKYSNG 224 (238)
T ss_dssp EEEETTCCEEEECSCCTTCEEEEEEEEEETTS
T ss_pred EEeeccceEEEecCCCCCCEEEEEEEEEeCCC
Confidence 3455555 799999999999999999876434
No 171
>2crz_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=63.54 E-value=11 Score=34.09 Aligned_cols=51 Identities=22% Similarity=0.261 Sum_probs=34.3
Q ss_pred CCCccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 905 SGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+|.++.+-.|+....+.........-..-.|.|.||.||+.|.+++.+...
T Consensus 37 ~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 87 (110)
T 2crz_A 37 GGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANK 87 (110)
T ss_dssp TTSCCCEEEEEEECTTSCCCEEEEEESCSEEEEESCCTTCEEEECCEEECS
T ss_pred CCceeEEEEEEEEeCCCCceEEEEeCCcEEEEECCcCCCCEEEEEEEEEcC
Confidence 356777777777643322112222334678999999999999999998643
No 172
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=63.46 E-value=85 Score=28.24 Aligned_cols=46 Identities=17% Similarity=0.198 Sum_probs=32.9
Q ss_pred CCCcc--eEEEEEeCCCceEEE--EEeCCCceEEEc-----cccCccEEEEEEcC
Q 001120 95 GGPSN--VNVELLSHSGDLISS--VITSSEGSYLFK-----NIIPGKYKLRASHP 140 (1150)
Q Consensus 95 ~plaG--v~V~L~~~~g~~i~~--ttTd~~G~f~f~-----~L~pG~Y~l~a~~~ 140 (1150)
.|+.+ +.|+|.+++|..+.+ ..++.+|.|.++ +.+.|.|.|++...
T Consensus 31 ~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 31 HPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp CBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred cCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 45544 478899999976654 566888987664 33569999999764
No 173
>3qwq_B Adnectin; cell surface receptor, tyrosine kinase, glycoprotein, adnect antitumor, drug, engineered binding protein; HET: NAG BMA MAN FUC; 2.75A {Homo sapiens} PDB: 3qwr_D*
Probab=62.94 E-value=31 Score=31.91 Aligned_cols=47 Identities=19% Similarity=0.193 Sum_probs=29.7
Q ss_pred ccCCcEEEEEeCCCc--eeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 908 PKDGVSVEARSESKG--YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 908 p~~gv~v~~~~~~~~--~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
++.+-.|+....++. ..+.......-.|.|.||.||+.|.|++.+..
T Consensus 30 ~i~~Y~v~y~~~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~v~V~A~~ 78 (114)
T 3qwq_B 30 SYQYYRITYGETGGNSPVQEFTVPGPVHTATISGLKPGVDYTITVYAVT 78 (114)
T ss_dssp CCSEEEEEEEESSCSSCCEEEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred cccEEEEEEEECCCCCccEEEEeCCCcCEEEeCCCCCCCEEEEEEEEEE
Confidence 344555554433321 22323333456799999999999999999753
No 174
>3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A
Probab=62.15 E-value=33 Score=30.65 Aligned_cols=27 Identities=30% Similarity=0.433 Sum_probs=22.0
Q ss_pred eeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 928 VTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 928 ~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.....-.|.|+||.||+.|.|++.+..
T Consensus 55 v~~~~t~~~l~~L~p~t~Y~~~V~A~~ 81 (101)
T 3k2m_C 55 VPYSSSTATISGLSPGVDYTITVYAWG 81 (101)
T ss_dssp EETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred cCCCccEEEECCCCCCCEEEEEEEEEe
Confidence 333456899999999999999999753
No 175
>1x4x_A Fibronectin type-III domain containing protein 3A; FN3, immunoglobulin-like beta- sandwich fold, KIAA0970, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=61.77 E-value=19 Score=32.51 Aligned_cols=52 Identities=23% Similarity=0.268 Sum_probs=33.9
Q ss_pred CCCccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCC
Q 001120 905 SGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFG 957 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~ 957 (1150)
+|.++.+-.|+....+.... .......-.|.|.||.|++.|.+++.+....|
T Consensus 34 ~g~~i~~Y~v~~~~~~~~~~-~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~~G 85 (106)
T 1x4x_A 34 NGTDVTEYRLEWGGVEGSMQ-ICYCGPGLSYEIKGLSPATTYYCRVQALSVVG 85 (106)
T ss_dssp SSSCCCEEEEEEESSTTSCC-EEEEESCSEEEEESCCSSCEEEEEEEEECSSC
T ss_pred CCCcceEEEEEEEcCCCceE-EEEeCCcceEEEcCCCCCCEEEEEEEEEcCCc
Confidence 45667777777654332221 12233445899999999999999999864433
No 176
>2cuh_A Tenascin-X; fibronectin type III domain, extracellular matrix, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=61.67 E-value=16 Score=33.53 Aligned_cols=26 Identities=23% Similarity=0.254 Sum_probs=21.8
Q ss_pred eCCCceEEecCCCCCcEEEEEEEEec
Q 001120 929 TDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 929 Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.-..-.|.|+||.||+.|.|++.+..
T Consensus 55 ~~~~t~~~l~~L~P~t~Y~~~V~A~~ 80 (115)
T 2cuh_A 55 PGSAVDYPLHDLVLHTNYTATVRGLR 80 (115)
T ss_dssp ETTCSEEEECSCCSSSEEEEEEEEEE
T ss_pred CCCccEEEEeCCCCCCEEEEEEEEEe
Confidence 33456899999999999999999864
No 177
>3l5i_A Interleukin-6 receptor subunit beta; cytokine receptor, fibronectin type III domain, alternative cell membrane, disulfide bond; 1.90A {Homo sapiens} PDB: 3l5j_A
Probab=61.63 E-value=22 Score=37.86 Aligned_cols=48 Identities=17% Similarity=0.191 Sum_probs=32.5
Q ss_pred ccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 908 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 908 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
++.+-.|+....++........-..-.|.|.||.||+.|.+++.+...
T Consensus 228 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~L~p~t~Y~~~V~A~n~ 275 (290)
T 3l5i_A 228 FIRNYTIFYRTIIGNETAVNVDSSHTEYTLSSLTSDTLYMVRMAAYTD 275 (290)
T ss_dssp CCCEEEEEEEETTSCCEEEEEETTCSEEEECSCCTTCEEEEEEEEEET
T ss_pred EEEEEEEEEEeCCCCeEEEEeCCCceEEEeCCCCCCCEEEEEEEEEeC
Confidence 456666666654433333333444558999999999999999997543
No 178
>1j8k_A Fibronectin; EDA, TYPEIII domain, protein binding; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=61.47 E-value=27 Score=30.44 Aligned_cols=24 Identities=29% Similarity=0.576 Sum_probs=21.0
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|.||.||+.|.|++.+..
T Consensus 53 ~~~~~~l~~L~p~t~Y~~~V~A~~ 76 (94)
T 1j8k_A 53 EEDTAELQGLRPGSEYTVSVVALH 76 (94)
T ss_dssp SCCEEEECSCCCCSEEEEEEEECS
T ss_pred CccEEEeCCCCCCCEEEEEEEEEc
Confidence 355899999999999999999864
No 179
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=61.45 E-value=96 Score=42.43 Aligned_cols=205 Identities=13% Similarity=0.158 Sum_probs=104.0
Q ss_pred ecCCCCceEEEEEeccchhhhhccccceeE--EEE-eCCCceEEec-cCC---CCceEEEEEeCCC---eEEee----ec
Q 001120 732 VSPPLSGVNIRIIAAEDSQIASLKKGHLAL--ETS-TGADGSFIGG-PLY---DDITYNVEASKPG---YYLRQ----VG 797 (1150)
Q Consensus 732 v~p~l~gv~i~i~~~~~~~~~~~~~~~~~~--~~~-Td~~G~f~~g-pL~---~~~~y~v~a~k~g---y~l~~----~~ 797 (1150)
..|.-.-+.|+|.+.+. ..+. .+. ||.+|.|... +|+ .-..|.|.+...+ ..... .+
T Consensus 155 ~~p~~~~v~v~l~dP~g---------~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~~~~~~~~~~~F~VeE 225 (1661)
T 2b39_A 155 LLPVGQTVFITIETPDG---------IPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYEDSPQQVFSAEFEVKE 225 (1661)
T ss_dssp SCCCCCCEEEEEEETTE---------EEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CcccCceEEEEEECCCC---------CEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEeecCCCceEEEEEEEEE
Confidence 33443446788877654 2332 344 5688876533 444 3469999997442 12111 11
Q ss_pred ---c---ceeEEee----e---eeEEEEEEecCCCCCcccceEE-E--EeCCC---cc----ccceeecCCceEEEe--e
Q 001120 798 ---P---NSFSCQK----L---SQISVRIYSKDDAGEPIPSVLL-S--LSGDD---GY----RNNSVSWAGGSFHFD--N 852 (1150)
Q Consensus 798 ---~---~~f~~~k----l---~~i~v~v~~~~~~~~pl~gvll-s--lsg~~---~~----r~n~~t~~~G~~~f~--~ 852 (1150)
| ..+...+ . ..+.+++...-..|.|++|... . +...+ .+ +....+|.+|.+.|. .
T Consensus 226 YvlP~feV~i~~~~~~~~~~~~~~~~v~v~a~Y~~G~Pv~G~~~v~~~~~~~~~~~~~~~~~~~~~~~dg~G~~~l~~~~ 305 (1661)
T 2b39_A 226 YVLPSFEVQLEPEEKFYYIDDPDGLKVNIIARFLYGEQVDGTAFVIFGVQDGDRRISLTHSLTRVPINDGNGEAILKRQV 305 (1661)
T ss_dssp CCCCSBCCEEECSSSSCCSSCSSCCCEEEECBBSSSCBCCEEEEEEEEEECSSCEECCGGGCEEEEESSSCEEECCCTTT
T ss_pred ccCCcEEEEEEcCcceEecCCCcEEEEEEEEEEcCCCceeeEEEEEEEEecCCcccccCcceeeeEecCCeEEEEEehHH
Confidence 1 1222111 1 3456666655556999998532 2 22221 11 123458889998884 1
Q ss_pred cC------------CcceEEeecccc-------------cccCCCceeEEecCCceEEEEEEEEeeeEeEEEeeEcCCCC
Q 001120 853 LF------------PGNFYLRPLLKE-------------YAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQ 907 (1150)
Q Consensus 853 L~------------PG~Y~~~~~~ke-------------y~~~p~~~~i~v~~g~~~~v~~~~~r~~~s~~G~v~~~~g~ 907 (1150)
+. +.++++.+..-| ..+.++...|.+..... +.-....|.+.=.+...+|+
T Consensus 306 ~~~~~~~~~~~~~~~~~~~v~a~V~e~~gg~~~~~~~~~i~i~~~~~~i~~~~~~~----~~~~g~~~~~~v~~~~~dG~ 381 (1661)
T 2b39_A 306 LLNGVQPSRADALVGKSIYVSATVILQSGSDMVEAERTGIPIVTSPYQIHFTKTPK----FFKPAMPFDLMVYVTNPDGS 381 (1661)
T ss_dssp TSSSCTTCHHHHSSSCBCEEEEEEEETTTCCCCEECCCCCBCCSCSSBCCBSSCCS----EECSSEEEECCBBCBBTTTB
T ss_pred hhcccccCChhhccCcEEEEEEEEEEcCCceEEEeeeEEEEEEEeeEEEEEEeCCC----ccCCCCcEEEEEEEEcCCCC
Confidence 11 134555542211 11222222233321110 00011123233345688999
Q ss_pred ccCCcEEEEEeCCCceeEEEeeCCCc--eEEecCCCC-CcEEEEEEEEec
Q 001120 908 PKDGVSVEARSESKGYYEETVTDTSG--SYRLRGLHP-DTTYVIKVVKKD 954 (1150)
Q Consensus 908 p~~gv~v~~~~~~~~~~~~~~Td~~G--~~~i~gL~P-g~~y~i~~~~~~ 954 (1150)
|++++.|++...+ .+.+||++| .|.|. +.+ ...|.|+++..+
T Consensus 382 p~~~~~v~v~~~~----~~~~t~~~G~~~~~i~-~~~~~g~y~l~v~~~d 426 (1661)
T 2b39_A 382 PARHIPVVTQGSN----VQSLTQDDGVAKLSIN-TQNKRDPLTITVRTKK 426 (1661)
T ss_dssp CCSSCCEEETTCC----CCCCCSSSCBCCCEEE-ECSCCSCEEEEEEECC
T ss_pred CcCCceEEEeccc----eEEEECCCCeEEEEEE-CCCCCcEEEEEEEEcC
Confidence 9999988765322 246889999 56665 322 236999998754
No 180
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=61.01 E-value=24 Score=35.71 Aligned_cols=24 Identities=29% Similarity=0.495 Sum_probs=20.6
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|.||.||+.|.+++.+..
T Consensus 162 ~~~~~~i~~L~p~t~Y~~~V~A~n 185 (215)
T 1bqu_A 162 TRSSFTVQDLKPFTEYVFRIRCMK 185 (215)
T ss_dssp CCSEEEECSCCSSEEEEEEEEEEE
T ss_pred ccceEEeCCCCCCCEEEEEEEEcc
Confidence 345899999999999999999753
No 181
>2cui_A Tenascin-X; fibronectin type III domain, extracellular matirx, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=60.55 E-value=18 Score=33.59 Aligned_cols=28 Identities=29% Similarity=0.286 Sum_probs=22.3
Q ss_pred EeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 927 TVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 927 ~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
......-.|.|+||.||+.|.|.+.+..
T Consensus 64 ~v~~~~t~~~l~gL~PgT~Y~~~V~A~~ 91 (112)
T 2cui_A 64 MVPGTRHSAVLRDLRSGTLYSLTLYGLR 91 (112)
T ss_dssp EEETTCCEEEECSCCTTCEEEEEEEEEC
T ss_pred EcCCCcCEEEeCCCCCCCEEEEEEEEEE
Confidence 3333445899999999999999999753
No 182
>2l4o_A Cell WALL surface anchor family protein; RRGB, pilus, cell adhesion; NMR {Streptococcus pneumoniae}
Probab=59.45 E-value=5.8 Score=40.59 Aligned_cols=26 Identities=15% Similarity=0.268 Sum_probs=22.3
Q ss_pred EEeCCCceEEECccC-Cee-EEEEEEEec
Q 001120 217 AVSDADGKFMFKSVP-CGQ-YELVPHYKG 243 (1150)
Q Consensus 217 a~TDa~G~f~f~~Lp-pG~-Y~v~~~~~~ 243 (1150)
..|+++| ..|.+|+ .|. |.|.+...+
T Consensus 102 ~~T~~dG-~~F~~l~~~G~~Yl~vE~~~p 129 (181)
T 2l4o_A 102 KLTEAEG-AKFNTANLPAAKYKIYEIHSL 129 (181)
T ss_dssp EECCSSC-EEEECTTSCSSEEEEEECTTS
T ss_pred eeeCCCC-EEeecCccCCceEEEEEccCC
Confidence 4899999 9999999 899 999996443
No 183
>3f7q_A Integrin beta-4, GP150; hemidesmosome, cell adhesion, carcinoma, epidermolysis bullosa, alternative splicing, disease mutation, glycoprotein; HET: 1PE PG4; 1.75A {Homo sapiens} PDB: 3f7r_A 3f7p_C 1qg3_A
Probab=59.19 E-value=36 Score=35.10 Aligned_cols=22 Identities=14% Similarity=0.231 Sum_probs=19.6
Q ss_pred ceEEecCCCCCcEEEEEEEEec
Q 001120 933 GSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 933 G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
-.|.|.||.||+.|.+++.+..
T Consensus 160 ~~~~i~~L~p~t~Y~~~V~A~n 181 (234)
T 3f7q_A 160 RMLLIENLRESQPYRYTVKARN 181 (234)
T ss_dssp CEEEEECCCTTCCEEEEEEEEE
T ss_pred eEEEeCCCCCCCeEEEEEEEEC
Confidence 4799999999999999999754
No 184
>2db8_A Tripartite motif protein 9, isoform 2; ring finger protein 91, TRIM9, KIAA0282, RNF91, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=58.91 E-value=9.7 Score=34.86 Aligned_cols=49 Identities=22% Similarity=0.311 Sum_probs=31.6
Q ss_pred CCccCCcEEEEEeCC-CceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 906 GQPKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
|.++.+-.|+....+ +... +..+..+-.|.|.||.|++.|.+++.+...
T Consensus 38 ~~~i~~Y~v~~~~~~~~~~~-~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 87 (110)
T 2db8_A 38 TVPADGYILELDDGNGGQFR-EVYVGKETMCTVDGLHFNSTYNARVKAFNK 87 (110)
T ss_dssp CSCCSEEEEEECCSSSSCCE-EEEEESCSCEEEECCCSSSCCEEEEEEECS
T ss_pred CCCccEEEEEEEeCCCCceE-EEEeCCcCEEEECCCCCCCEEEEEEEEEeC
Confidence 445666666654332 2222 222335568999999999999999997643
No 185
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=58.54 E-value=50 Score=39.50 Aligned_cols=109 Identities=18% Similarity=0.126 Sum_probs=57.4
Q ss_pred CCceEEEeecCCcceE-Eeecc--ccccc--CCCceeEEecC--CceEEEEEEEEeeeEeEEEeeE----cCCCCccCCc
Q 001120 844 AGGSFHFDNLFPGNFY-LRPLL--KEYAF--SPPAQAIELGS--GESREVIFQATRVAYSATGTIT----LLSGQPKDGV 912 (1150)
Q Consensus 844 ~~G~~~f~~L~PG~Y~-~~~~~--key~~--~p~~~~i~v~~--g~~~~v~~~~~r~~~s~~G~v~----~~~g~p~~gv 912 (1150)
..-.+.+.+|.|++-| ||-.. ..=.. .+.+..+.+.- +.-..+.+ ......++ .|+ ...+.++.+-
T Consensus 398 ~~ts~tI~gL~P~T~Y~frV~A~N~~G~~sps~~s~~v~v~T~~~~Ps~~~~-~~~s~tSV--~LsW~pP~~~ng~I~~Y 474 (536)
T 3fl7_A 398 TRTSVTVSDLEPHMNYTFTVEARNGVSGLVTSRSFRTASVSINQTEPPKVRL-EGRSTTSL--SVSWSIPPPQQSRVWKY 474 (536)
T ss_dssp CSSEEEEECCCTTCEEEEEEEEECTTGGGCSCCCEEEEEEECCSCCCCEEEE-EECCC-CC--EEEEECCTTTTTTCSEE
T ss_pred ccceeEeCCCCCCCEEEEEEEEEecCCCCCCCCccceeEEeecccCCCCCce-eeccCCeE--EEEEECCcCCCCcccEE
Confidence 3567899999999866 44322 11111 23444444442 32233322 11111111 122 1123456677
Q ss_pred EEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 913 SVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 913 ~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
.|+....+.........-..-.|.|.||.|++.|.+++.+...
T Consensus 475 ~V~y~~~~~~~~~~~v~~~~ts~~l~gL~P~T~Y~frVrA~n~ 517 (536)
T 3fl7_A 475 EVTYRKKGDSNSYNVRRTEGFSVTLDDLAPDTTYLVQVQALTQ 517 (536)
T ss_dssp EEEEEEC--CCCCEEEEESSSEEECCSCCSSCEEEEEEEEECC
T ss_pred EEEEEECCCCceEEEEcCCCCEEEECCCCCCCEEEEEEEEEcC
Confidence 7776654322222233344568999999999999999997543
No 186
>2haz_A N-CAM 1, neural cell adhesion molecule 1; fibronectin type III repeat, FN1, beta sandwich; 1.70A {Homo sapiens} SCOP: b.1.2.1
Probab=58.17 E-value=15 Score=33.17 Aligned_cols=52 Identities=21% Similarity=0.346 Sum_probs=36.0
Q ss_pred cCCCCccCCcEEEEEeCCCc-ee-E-EEe-e-CCCceEEecCCCCCcEEEEEEEEec
Q 001120 903 LLSGQPKDGVSVEARSESKG-YY-E-ETV-T-DTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 903 ~~~g~p~~gv~v~~~~~~~~-~~-~-~~~-T-d~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..+|.|+.+-.|+....+.. .. . ... . ...-.|.|.||.|++.|.+++.+..
T Consensus 31 ~~~G~pi~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n 87 (105)
T 2haz_A 31 ATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALN 87 (105)
T ss_dssp CCTTSCCCEEEEEEEETTCCCCEEEEEEHHHHHHHSEEEECSCCTTCEEEEEEEEEE
T ss_pred ccCCccccEEEEEEEECCCCCCccceEEccccCCccEEEECCCCCCCEEEEEEEEEc
Confidence 36788899999988755422 11 1 111 1 1345799999999999999999754
No 187
>2yuw_A Myosin binding protein C, SLOW type; fibronectin III domain, SLOW- type protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=56.73 E-value=17 Score=32.75 Aligned_cols=50 Identities=16% Similarity=0.187 Sum_probs=31.4
Q ss_pred CCccCCcEEEEEeCCCceeEEEee--CCCceEEecCCCCCcEEEEEEEEecC
Q 001120 906 GQPKDGVSVEARSESKGYYEETVT--DTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~~~~~~~~~T--d~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
|.++.+-.|+....+......... -..-.|.|.||.||+.|.+++.+...
T Consensus 36 ~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 87 (110)
T 2yuw_A 36 AAGLDGYVLEYCFEGTEDWIVANKDLIDKTKFTITGLPTDAKIFVRVKAVNA 87 (110)
T ss_dssp SSCEEEEEEEEEETTCSSEEECCSSCCCSSEEEECSCCTTCEEEEEEEEEET
T ss_pred CCCccEEEEEEEECCCccceEeccccCccCEEEECCCCCCCEEEEEEEEEcC
Confidence 456666666665443211111111 14557999999999999999998643
No 188
>2dkm_A Collagen alpha-1(XX) chain; FN3 domain, KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.66 E-value=12 Score=33.74 Aligned_cols=26 Identities=23% Similarity=0.342 Sum_probs=21.6
Q ss_pred eeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 928 VTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 928 ~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
....+ .|.|+||.||+.|.|++.+..
T Consensus 57 ~~~~~-~~~l~~L~p~t~Y~~~V~A~~ 82 (104)
T 2dkm_A 57 QVGRP-EVLLDGLEPGRDYEVSVQSLR 82 (104)
T ss_dssp EESSS-EEEEESCCTTCCEEEEEEEEC
T ss_pred ecCCC-EEEECCCCCCCEEEEEEEEEC
Confidence 33444 999999999999999999864
No 189
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=56.59 E-value=16 Score=34.63 Aligned_cols=49 Identities=20% Similarity=0.318 Sum_probs=34.3
Q ss_pred EEEEEEEeCCcce--eceEEEEEECCCCcccCCCCCCCcccccceeeEEEeCCCceEEECc
Q 001120 171 EIRGLVVAQGNPI--LGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKS 229 (1150)
Q Consensus 171 ~i~G~V~~~G~Pl--~Ga~V~L~~~~~~~~~~~~g~~~~~~~g~~~~~a~TDa~G~f~f~~ 229 (1150)
.+.|++.=.|+|. .+|.|.|++.+... ......+..+.||++|+|.+.+
T Consensus 6 ~V~G~L~C~~~Pa~~~~V~V~L~d~~~~~----------~d~Ddll~~~~Td~~G~F~l~G 56 (117)
T 3uaf_A 6 MATGVLKCPTDPEAVKKVHIDLWDAAAAA----------AESDDLMGRTWSDRNGNFQVTG 56 (117)
T ss_dssp EEEEEEECTTCGGGGSSCEEEEEEHHHHH----------TTSCCEEEEEECCTTSEEEEEE
T ss_pred EEEEEEEeCCccCCCCCEEEEEEeccccc----------CCchHhheeeEECCCCEEEEEE
Confidence 4688988888885 48999999732100 0001146889999999999975
No 190
>1x5x_A Fibronectin type-III domain containing protein 3A; structural genomics, KIAA0970, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=56.01 E-value=21 Score=32.03 Aligned_cols=50 Identities=18% Similarity=0.309 Sum_probs=33.6
Q ss_pred CCCccCCcEEEEEeCCC--ceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 905 SGQPKDGVSVEARSESK--GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~~--~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+|.++.+-.|+....+. ...... .-..-.|.|.||.|++.|.+++.+...
T Consensus 35 ~~~~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~~~v~~L~p~t~Y~frV~A~n~ 86 (109)
T 1x5x_A 35 PSDEGISYILEMEEETSGYGFKPKY-DGEDLAYTVKNLRRSTKYKFKVIAYNS 86 (109)
T ss_dssp CSSSSCEEEEEECCSSSSCCCEEEE-EESCSEEEEESCCSSCEEEEEEEEECS
T ss_pred CCCcccEEEEEEecCCCCcceEEeE-eCCccEEEECCCCCCCEEEEEEEEEeC
Confidence 34577777777664332 222222 233568999999999999999998643
No 191
>2dn7_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=55.04 E-value=31 Score=30.65 Aligned_cols=47 Identities=17% Similarity=0.266 Sum_probs=30.0
Q ss_pred ccCCcEEEEEeCC-CceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 908 PKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 908 p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
++-+-.|+....+ .........-..-.|.|.||.|++.|.+++.+..
T Consensus 36 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 83 (107)
T 2dn7_A 36 ELLGYRLQYCRADEARPNTIDFGKDDQHFTVTGLHKGTTYIFRLAAKN 83 (107)
T ss_dssp CCCEEEEEEEETTCSSCEEEEEETTCCEEEEECCCTTCEEEEEEEEEE
T ss_pred ceeEEEEEEEECCCCCCEEEEeCCCccEEEeCCCCCCCEEEEEEEEEc
Confidence 3555555555333 2222223334445899999999999999999753
No 192
>2dm4_A Sortilin-related receptor; beta-sandwich, sorting protein-related receptor containing LDLR class A repeats, sorla; NMR {Homo sapiens}
Probab=54.44 E-value=24 Score=31.63 Aligned_cols=22 Identities=18% Similarity=0.315 Sum_probs=19.8
Q ss_pred ceEEecCCCCCcEEEEEEEEec
Q 001120 933 GSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 933 G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
-.|.|.||.|++.|.+++.+..
T Consensus 63 ~~~~l~~L~p~t~Y~~~V~A~n 84 (108)
T 2dm4_A 63 NFTEIKNLLVNTLYTVRVAAVT 84 (108)
T ss_dssp SEEEECSCCSSCEEEEEEEEEE
T ss_pred cEEEeCCCCCCCEEEEEEEEEC
Confidence 4899999999999999999754
No 193
>1bpv_A Titin, A71, connectin; fibronectin type III; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=54.11 E-value=24 Score=32.53 Aligned_cols=54 Identities=22% Similarity=0.395 Sum_probs=36.3
Q ss_pred CCCCccCCcEEEEEeCCCc-eeEEE-eeCCCceEEecCCCCCcEEEEEEEEecCCC
Q 001120 904 LSGQPKDGVSVEARSESKG-YYEET-VTDTSGSYRLRGLHPDTTYVIKVVKKDGFG 957 (1150)
Q Consensus 904 ~~g~p~~gv~v~~~~~~~~-~~~~~-~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~ 957 (1150)
.+|.|+.+-.|+....+.. ...-. ..-..-.|.+.||.||+.|.+++.+....|
T Consensus 37 ~gg~~i~~Y~Ve~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~G 92 (112)
T 1bpv_A 37 TGGFKITSYIVEKRDLPNGRWLKANFSNILENEFTVSGLTEDAAYEFRVIAKNAAG 92 (112)
T ss_dssp CTTCCCSCCEEEEEETTSCCCEECCCSCCCSSEEEECSCCSSCCEEEEEEEECTTS
T ss_pred CCCCcccEEEEEEEECCCCceEEeecccCccCEEEECCCCCCCEEEEEEEEEECCC
Confidence 3577899999998764321 11111 112345799999999999999999864434
No 194
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=53.60 E-value=35 Score=33.06 Aligned_cols=43 Identities=26% Similarity=0.485 Sum_probs=30.8
Q ss_pred CCcceEEEEEeCCCceEEEEE--eCCCceEEEc--c-------ccCccEEEEEE
Q 001120 96 GPSNVNVELLSHSGDLISSVI--TSSEGSYLFK--N-------IIPGKYKLRAS 138 (1150)
Q Consensus 96 plaGv~V~L~~~~g~~i~~tt--Td~~G~f~f~--~-------L~pG~Y~l~a~ 138 (1150)
+...++|++++.+|+++++.. .-+.|.+.|. . ++||.|++++.
T Consensus 37 ~a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~ 90 (138)
T 3c12_A 37 SAGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITAT 90 (138)
T ss_dssp SSEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEE
T ss_pred CCCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEE
Confidence 456789999998898776643 3556665554 3 78899998875
No 195
>2ed8_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.45 E-value=31 Score=30.68 Aligned_cols=47 Identities=26% Similarity=0.370 Sum_probs=30.6
Q ss_pred ccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 908 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 908 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
++.+-.|+....+........++ .-.|.|.||.|++.|.+++.+...
T Consensus 37 ~i~~Y~v~~~~~~~~~~~~~~~~-~~~~~i~~L~p~t~Y~~~V~A~n~ 83 (106)
T 2ed8_A 37 PVQGYRLFCTEVSTGKEQNIEVD-GLSYKLEGLKKFTEYSLRFLAYNR 83 (106)
T ss_dssp CCCEEEEEEEETTTCCEEEEEEC-SSCEEEESCCTTCEEEEEEEEECS
T ss_pred CeeEEEEEEEECCCCceEEEeCC-ccEEEECCCCCCCEEEEEEEEEeC
Confidence 55666666554332111122233 578999999999999999998643
No 196
>1x5z_A Receptor-type tyrosine-protein phosphatase delta; fibronectin type III domain containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=53.42 E-value=25 Score=31.75 Aligned_cols=47 Identities=19% Similarity=0.418 Sum_probs=29.6
Q ss_pred ccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 908 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 908 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
++.+-.|+....+............-.|.|.||.|++.|.+++.+..
T Consensus 45 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 91 (115)
T 1x5z_A 45 TIANYELVYKDGEHGEEQRITIEPGTSYRLQGLKPNSLYYFRLAARS 91 (115)
T ss_dssp CCCEEEECBEESSSCCCBCCEECSSSEEEEECCCTTCEEEECEEEEC
T ss_pred CccEEEEEEEeCCCCCceEEecCCCcEEEECCCCCCCeEEEEEEEEC
Confidence 45555555543321111112233457899999999999999999754
No 197
>1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1
Probab=52.95 E-value=1.6e+02 Score=29.99 Aligned_cols=94 Identities=14% Similarity=0.236 Sum_probs=54.0
Q ss_pred EEEEEEECCCCcccCCceEEEEEcCCCcCCcceeeEEEeC--ceEEEEEEeecCCccccCCCCCCcceEEEEEeCCCceE
Q 001120 35 SFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDINFRFTG--FTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLI 112 (1150)
Q Consensus 35 ~Y~L~~~~P~Gw~f~p~~v~v~Vd~~~~s~~~dinf~~~g--~~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g~~i 112 (1150)
.|.|+..+.+||. ..+++. .|.-.... ..|+++-.-.+++. .++..+.-++|+|+. +|..+
T Consensus 64 ~YtV~E~~v~gY~-------~~i~G~------~ITNt~~P~~~~i~V~K~W~d~~~---~~~~rP~~I~v~L~~-dG~~~ 126 (187)
T 1d2o_A 64 EYTVTEDHVKDYT-------TDINGT------TITNKYTPGETSATVTKNWDDNNN---QDGKRPTEIKVELYQ-DGKAT 126 (187)
T ss_dssp CEEEEECCCTTEE-------EEEETT------EEEEEECTTEEEEEEEEEEESSTT---SSSCCCSCEEEEEEE-TTEEE
T ss_pred EEEEEeCCCCCcE-------EeeccE------EEEccccCccccceeeEEEcCCCC---ccCCCCceEEEEEEe-CCeEe
Confidence 4888776667774 223431 23322221 24555432221211 124456789999987 56544
Q ss_pred EEE---EeCCCceEEEccccC---c---cEEEEEE--cCCceEE
Q 001120 113 SSV---ITSSEGSYLFKNIIP---G---KYKLRAS--HPNLSVE 145 (1150)
Q Consensus 113 ~~t---tTd~~G~f~f~~L~p---G---~Y~l~a~--~~g~~~~ 145 (1150)
... ..+.+..|+|.+|+- | .|.|.+. .+||...
T Consensus 127 g~~~~l~~~n~W~~tf~~Lp~~~~G~~i~YtV~E~~~~~GY~~~ 170 (187)
T 1d2o_A 127 GKTAILNESNNWTHTWTGLDEKAKGQQVKYTVEELTKVKGYTTH 170 (187)
T ss_dssp EEEEEESGGGTTEEEEEEEESEETTEECCEEEEECSCCTTEEEE
T ss_pred ceEEEEecCCceEEEEcCCCccCCCCEEEEEEEEeCcCCCcEEE
Confidence 322 235567899999986 3 6999885 4788655
No 198
>1x5f_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=52.95 E-value=27 Score=31.84 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=31.8
Q ss_pred ccCCcEEEEEeCC-C-ceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 908 PKDGVSVEARSES-K-GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 908 p~~gv~v~~~~~~-~-~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
++.+-.|+....+ . ...........-.|.|+||.|++.|.+++.+..
T Consensus 48 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 96 (120)
T 1x5f_A 48 DNLTYSVFYTKEGIARERVENTSHPGEMQVTIQNLMPATVYIFRVMAQN 96 (120)
T ss_dssp CSSEEEEEEEETTCCCCEEEECSSTTCSEEEECSCCTTCEEEEEEEEEC
T ss_pred cEEEEEEEEEECCCCCceEEEeccCCccEEEeCCCCCCCEEEEEEEEEC
Confidence 6677777766543 1 112222223467899999999999999999854
No 199
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=52.80 E-value=3.7e+02 Score=32.29 Aligned_cols=57 Identities=21% Similarity=0.293 Sum_probs=37.7
Q ss_pred EEEeeEcCCCCccCCcEEEEEe--CC-----CceeEEEeeCCCceEEecCCCCC--cEEEEEEEEe
Q 001120 897 ATGTITLLSGQPKDGVSVEARS--ES-----KGYYEETVTDTSGSYRLRGLHPD--TTYVIKVVKK 953 (1150)
Q Consensus 897 ~~G~v~~~~g~p~~gv~v~~~~--~~-----~~~~~~~~Td~~G~~~i~gL~Pg--~~y~i~~~~~ 953 (1150)
+.=.+.+.+|+|.+++.|++.- .. .......++|.+|.+.+.=..|. ..|.++++..
T Consensus 367 ~~v~v~~~dG~P~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~v~~~ 432 (656)
T 4fxk_A 367 LQALVREMSGSPASGIPVKVSATVSSPGSVPEVQDIQQNTDGSGQVSIPIIIPQTISELQLSVSAG 432 (656)
T ss_dssp EEEEEECSSSSCCCSCCEEEEEEEECGGGCEEEEEEEECCCTTSEEEECCBCCTTCSEEEEEEEES
T ss_pred EEEEEECCCCCCCCCceEEEEEEEeccceEEeeeEEEEEecCCceEEEEEeCCCCCcEEEEEEEeC
Confidence 3445678999999998887642 11 11234566899999888765554 4577777654
No 200
>2dju_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=52.35 E-value=64 Score=28.29 Aligned_cols=50 Identities=18% Similarity=0.363 Sum_probs=32.3
Q ss_pred CCccCCcEEEEEeCCCc-eeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 906 GQPKDGVSVEARSESKG-YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~~~-~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+.++.+-.|+....+.. ..........-.|.|.||.|++.|.+++.+...
T Consensus 33 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 83 (106)
T 2dju_A 33 SEPVTYYGIQYRAAGTEGPFQEVDGVATTRYSIGGLSPFSEYAFRVLAVNS 83 (106)
T ss_dssp SSCCSEEEEEEEETTCCSCCCCBCCCCSSEEEEESCCTTCEEEEEEEEECS
T ss_pred CCCceEEEEEEEECCCCCCeEEccCCCccEEEEeCCCCCcEEEEEEEEEeC
Confidence 45667777776654311 111112224457999999999999999998643
No 201
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=52.16 E-value=27 Score=31.54 Aligned_cols=30 Identities=20% Similarity=0.329 Sum_probs=24.4
Q ss_pred EEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 925 EETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 925 ~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
+.......-++.|+||.||..|.|.+.+..
T Consensus 51 ~~~v~g~~~s~~l~~L~PgT~Y~V~v~a~~ 80 (95)
T 2h41_A 51 YLDLPSTATSVNIPDLLPGRKYIVNVYQIS 80 (95)
T ss_dssp EEEEETTCCEEEECSCCTTCEEEEEEEEEE
T ss_pred EEECCCCccEEEECCCCCCCEEEEEEEEEc
Confidence 445555677899999999999999999753
No 202
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=51.27 E-value=60 Score=34.61 Aligned_cols=56 Identities=20% Similarity=0.349 Sum_probs=40.9
Q ss_pred EEEeceEEEEEEEeC-CCccc------cCeEEEE--cc-----e-e-eeEeCCCceEEECccCCccEEEEEE
Q 001120 270 FQVTGFSVGGRVVDE-NDMGV------EGVKILV--DG-----H-E-RSITDRDGYYKLDQVTSNRYTIEAV 325 (1150)
Q Consensus 270 f~~~g~sV~G~V~d~-~G~pl------aGA~V~l--~G-----~-~-~~~TD~dG~f~l~~L~pG~Ytv~~~ 325 (1150)
+..+...+.|+|+|. +|+|+ .|+++.| .| . . -.....||.|+=..|=.|+|.|...
T Consensus 5 YDeP~s~l~G~ivd~~tGE~i~~~~g~~gv~i~l~E~g~~~~~~~~~~~~v~~DGtf~Nt~lF~G~Yki~~~ 76 (249)
T 4eiu_A 5 YEEPSETIWGEVVDEATGKRVLTDQGSEGIRVRLTELSWGDNVQHNPDFYCMMDGTFQNTKIFKGEYNVRID 76 (249)
T ss_dssp ---CCEEEEEEEEETTTCCBCCCCSSTTSCEEEEEECCSSCCBCCSCCEECCTTSEEEEEEECSEEEEEEEE
T ss_pred CCCCcceeEEEEEECCCCCEeeeccCCCceEEEEEecccccCCCccCCEEECCCCceeeeeEEcceeEEEeC
Confidence 445567899999996 77776 3588888 11 1 1 2477899999955789999999987
No 203
>1x4z_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=50.95 E-value=30 Score=31.71 Aligned_cols=51 Identities=18% Similarity=0.262 Sum_probs=34.6
Q ss_pred CCCccCCcEEEEEeCC--Cce--eEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 905 SGQPKDGVSVEARSES--KGY--YEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~--~~~--~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+|.|+.+-.|+..... +.. ......-..-.|.|.||.||..|.+++.+...
T Consensus 44 ~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 98 (121)
T 1x4z_A 44 GGFPIQSFRVEYKKLKKVGDWILATSAIPPSRLSVEITGLEKGISYKFRVRALNM 98 (121)
T ss_dssp TTSCCCEEEEEEEESSSCCCCEEEEEEECTTCCEEEEESCCTTCEEEEEEEEEET
T ss_pred CCCcceEEEEEEEECCCCCceEEeecccCCCcCEEEECCCCCCCEEEEEEEEEcC
Confidence 5667888888777543 211 11122334568999999999999999998643
No 204
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=49.88 E-value=34 Score=30.75 Aligned_cols=27 Identities=30% Similarity=0.460 Sum_probs=22.3
Q ss_pred eeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 928 VTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 928 ~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.....=.|.|+||.||+.|.|++.+..
T Consensus 59 v~~~~ts~~l~~L~p~t~Y~~~V~A~~ 85 (103)
T 3t04_D 59 VPGYYSTATISGLKPGVDYTITVYAYD 85 (103)
T ss_dssp EETTCCEEEECSCCTTCCEEEEEEEES
T ss_pred cCCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 333456899999999999999999864
No 205
>2ed9_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=48.08 E-value=29 Score=31.74 Aligned_cols=48 Identities=19% Similarity=0.199 Sum_probs=31.4
Q ss_pred ccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 908 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 908 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
++.+-.|+....+.........-..-.|.|.||.|++.|.+++.+...
T Consensus 60 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 107 (124)
T 2ed9_A 60 FITGYKIRHRKTTRRGEMETLEPNNLWYLFTGLEKGSQYSFQVSAMTV 107 (124)
T ss_dssp CCCEEEEEEEESSSSCCEEEECSSCSEEEEECCCSSCEEEECEEEECS
T ss_pred EEeEEEEEEEECCCCcceEEecCCcCEEEEcCCCCCCEEEEEEEEEcC
Confidence 455666666544321111223445568999999999999999997643
No 206
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=47.45 E-value=28 Score=31.60 Aligned_cols=48 Identities=15% Similarity=0.186 Sum_probs=36.8
Q ss_pred EEEEEEEeCCCcccc-CeEEEE-cceeeeEeCCCceEEECccCC-ccEEEE
Q 001120 276 SVGGRVVDENDMGVE-GVKILV-DGHERSITDRDGYYKLDQVTS-NRYTIE 323 (1150)
Q Consensus 276 sV~G~V~d~~G~pla-GA~V~l-~G~~~~~TD~dG~f~l~~L~p-G~Ytv~ 323 (1150)
.+--++.+++|+|++ ||.|.- +|+.+...+.+|..-++++++ |+.+|+
T Consensus 9 ~~ll~l~~~dG~plPfGA~V~d~~g~~~giVG~~G~vyl~gl~~~g~L~V~ 59 (94)
T 3l48_A 9 RLFAILRLADGSQPPFGASVTSEKGRELGMVADEGLAWLSGVTPGETLSVN 59 (94)
T ss_dssp CEEEEEEETTSCCCCTTCEEECTTCCEEEEBCGGGEEEESSCCTTCEEEEE
T ss_pred EEEEEEECCCCCcCCCccEEEcCCCceEEEECCCCEEEEECCCCCCEEEEE
Confidence 344467788999998 898865 567778999999999999976 444443
No 207
>2ocf_D Fibronectin; estrogen receptor, LBD, monobody, estradiol, hormone-growth complex; HET: CME EST; 2.95A {Homo sapiens}
Probab=46.78 E-value=43 Score=31.27 Aligned_cols=26 Identities=23% Similarity=0.448 Sum_probs=21.9
Q ss_pred eCCCceEEecCCCCCcEEEEEEEEec
Q 001120 929 TDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 929 Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
....-.|.|.||.||+.|.|++.+..
T Consensus 78 ~~~~t~~~l~gL~P~t~Y~~~V~A~~ 103 (121)
T 2ocf_D 78 PGSKSTATISGLKPGVDYTITVYAVT 103 (121)
T ss_dssp ETTCCEEEECCCCTTCEEEEEEEEEC
T ss_pred CCCcCEEEeCCCCCCCEEEEEEEEEe
Confidence 33456899999999999999999864
No 208
>2e3v_A Neural cell adhesion molecule 1, 140 kDa isoform; NCAM, N-CAM 1, NCAM-120, CD56 antigen, membra protein, glycoprotein, structural genomics, NPPSFA; HET: PGE BTB; 1.95A {Homo sapiens}
Probab=44.79 E-value=34 Score=31.68 Aligned_cols=51 Identities=22% Similarity=0.348 Sum_probs=32.5
Q ss_pred CCCCccCCcEEEEEeCCC-ce-e--EE-EeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 904 LSGQPKDGVSVEARSESK-GY-Y--EE-TVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 904 ~~g~p~~gv~v~~~~~~~-~~-~--~~-~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.+|.|+.+-.|+....+. .. . .. .+.-..-.|.|.+|.|++.|.+++.+..
T Consensus 33 ~~G~pI~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~rV~A~n 88 (122)
T 2e3v_A 33 TGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALN 88 (122)
T ss_dssp C--CCEEEEEEEEEETTCCSCEEEEEEHHHHHTTTEEEECSCCTTCEEEEEEEEEE
T ss_pred CCCCcceEEEEEEEECCCCCcccceeeeeecCccceEEeCCCCCCCEEEEEEEEEe
Confidence 467777788887765431 11 1 10 1112345799999999999999999754
No 209
>1x5l_A Ephrin type-A receptor 8; FN3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=44.26 E-value=34 Score=30.61 Aligned_cols=24 Identities=29% Similarity=0.528 Sum_probs=20.7
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|.||.|++.|.+++.+..
T Consensus 64 ~~~~~~i~~L~p~t~Y~~~V~A~n 87 (111)
T 1x5l_A 64 VTTRATVSGLKPGTRYVFQVRART 87 (111)
T ss_dssp SSSEEEECSCCTTCEEEECEEEEE
T ss_pred CCCEEEEcCCCCCCEEEEEEEEEe
Confidence 455899999999999999999753
No 210
>1uem_A KIAA1568 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=44.17 E-value=45 Score=30.07 Aligned_cols=49 Identities=27% Similarity=0.385 Sum_probs=30.7
Q ss_pred CCccCCcEEEEEeCC-C-ceeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 906 GQPKDGVSVEARSES-K-GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~-~-~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
+.++.+-.|+....+ . ....-...-..-.|.|.||.||+.|.+++.+..
T Consensus 43 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n 93 (117)
T 1uem_A 43 TLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAIN 93 (117)
T ss_dssp SSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEEEEEEEE
T ss_pred CcCceEEEEEEEECCCCCceeEcccccCcCEEEECCCCCCCEEEEEEEEEC
Confidence 445556666655432 1 111111222456899999999999999999854
No 211
>2edb_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.00 E-value=45 Score=30.52 Aligned_cols=25 Identities=20% Similarity=0.375 Sum_probs=21.0
Q ss_pred CCceEEecCCCCCcEEEEEEEEecC
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
..-.|.|.||.|++.|.|++.+...
T Consensus 69 ~~~~~~l~~L~p~t~Y~~~V~A~n~ 93 (116)
T 2edb_A 69 KQRYYSIERLESSSHYVISLKAFNN 93 (116)
T ss_dssp TCCEEEECSCCSSSBEEEEEEEEET
T ss_pred CeeEEEeCCCCCCCEEEEEEEEEeC
Confidence 3457999999999999999997543
No 212
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=43.78 E-value=54 Score=34.26 Aligned_cols=77 Identities=21% Similarity=0.346 Sum_probs=52.4
Q ss_pred eeeeEEEEEEecCCCCCccc-----ceEEEEeCCCcccc----ceeecCCceEEEeecCCcceEEeecccccccC--C-C
Q 001120 805 KLSQISVRIYSKDDAGEPIP-----SVLLSLSGDDGYRN----NSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFS--P-P 872 (1150)
Q Consensus 805 kl~~i~v~v~~~~~~~~pl~-----gvllslsg~~~~r~----n~~t~~~G~~~f~~L~PG~Y~~~~~~key~~~--p-~ 872 (1150)
+-+.+..+++.. |+|++ |+.+.|.-. +|.. +.....||+|. .-|+.|+|-+++.....-|- | .
T Consensus 9 P~a~l~G~iv~t---GE~i~~~~~~gv~i~l~E~-gy~~~~~~~~~v~qDGtf~-~~lF~G~Yki~~~~gnGPf~~~~~d 83 (215)
T 3hn5_A 9 PESMLTGRVMYN---GEALQLRGNEAVQLQLYQH-GYAKHDPINVYVNQDGMYS-ANLFDGEYQMITKSGNGPWTSEGRD 83 (215)
T ss_dssp -CEEEEEEEEET---TEECCCCCTTSCEEEEESS-CGGGCCCEEEEBCTTSEEE-EEECSEEEEEEECTTCSSBCSTTCC
T ss_pred CCceEEEEEEEC---CCEeeecCCCceEEEEEEc-ccCCCCCeeEEEcCCCcEE-EEEECceeEEEEecCCCCcccCCCC
Confidence 345677777732 77774 477877765 6766 35688999999 99999999999876544443 2 4
Q ss_pred ceeEEecCCceEEE
Q 001120 873 AQAIELGSGESREV 886 (1150)
Q Consensus 873 ~~~i~v~~g~~~~v 886 (1150)
++.|+|+-..+..+
T Consensus 84 ti~v~i~G~t~~Df 97 (215)
T 3hn5_A 84 TINVTVAGNTVQDV 97 (215)
T ss_dssp CEEEEESSSEECCE
T ss_pred eEEEEECCCeEEeE
Confidence 56677854433333
No 213
>3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A
Probab=43.55 E-value=2.5e+02 Score=27.72 Aligned_cols=25 Identities=36% Similarity=0.558 Sum_probs=21.1
Q ss_pred CCCceEEecCCCCCcEEEEEEEEec
Q 001120 930 DTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 930 d~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
...-.|.|.||.|++.|.+++.+..
T Consensus 61 ~~~~~~~i~~L~p~t~Y~~~V~A~n 85 (211)
T 3p4l_A 61 ATTLSYLVTGLKPNTLYEFSVMVTK 85 (211)
T ss_dssp ESSSEEEECSCCTTCEEEEEEEEEE
T ss_pred CCceEEEecCcCCCCEEEEEEEEEc
Confidence 3455899999999999999999754
No 214
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=43.40 E-value=81 Score=31.41 Aligned_cols=48 Identities=17% Similarity=0.207 Sum_probs=31.3
Q ss_pred ccCCcEEEEEeCC-C-ceeEEEeeC-CCceEEecCCCCCcEEEEEEEEecC
Q 001120 908 PKDGVSVEARSES-K-GYYEETVTD-TSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 908 p~~gv~v~~~~~~-~-~~~~~~~Td-~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
++.+-.|+....+ . ........+ ..-.|.|.||.||+.|.|++.+...
T Consensus 136 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 186 (205)
T 1cfb_A 136 PNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKVVAIND 186 (205)
T ss_dssp SSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEEEEEET
T ss_pred CceEEEEEEEECCCCCCcEEEEecCCCccEEEEcCCCCCcEEEEEEEEEcC
Confidence 3455555555433 1 133333444 4678999999999999999997543
No 215
>1x5g_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=43.26 E-value=43 Score=30.16 Aligned_cols=47 Identities=19% Similarity=0.235 Sum_probs=29.8
Q ss_pred ccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 908 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 908 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
++.+-.|+....+........+ ..-.|.|.||.|++.|.+++.+...
T Consensus 47 ~i~~Y~v~~~~~~~~~~~~~~~-~~~~~~i~~L~p~t~Y~~~V~A~n~ 93 (116)
T 1x5g_A 47 EIQNYKLYYMEKGTDKEQDVDV-SSHSYTINGLKKYTEYSFRVVAYNK 93 (116)
T ss_dssp CCSEEEEEEEETTCCCCCCEEE-CSSEEEECSCCTTCEEEEEEEEECS
T ss_pred cccEEEEEEEECCCCccEEEec-CCceEEEcCCCCCCEEEEEEEEEcC
Confidence 4556666655433111111222 3568999999999999999997543
No 216
>1x3d_A Fibronectin type-III domain containing protein 3A; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=43.10 E-value=23 Score=32.26 Aligned_cols=25 Identities=8% Similarity=0.353 Sum_probs=21.1
Q ss_pred CCceEEecCCCCCcEEEEEEEEecC
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
..-.|.|.||.|++.|.+++.+...
T Consensus 71 ~~~~~~v~~L~p~t~Y~frV~A~n~ 95 (118)
T 1x3d_A 71 SQKQFKITKLSPAMGCKFRLSARND 95 (118)
T ss_dssp SCSEEEEESCCTTCEEEEECCEEES
T ss_pred CCcEEEeCCCCCCCEEEEEEEEEEC
Confidence 4468999999999999999997543
No 217
>1x5a_A Ephrin type-A receptor 1; tyrosine-protein kinase receptor, ESK, fibronectin type III (FN3) domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.1.2.1
Probab=43.01 E-value=34 Score=30.98 Aligned_cols=22 Identities=36% Similarity=0.582 Sum_probs=19.5
Q ss_pred EEecCCCCCcEEEEEEEEecCC
Q 001120 935 YRLRGLHPDTTYVIKVVKKDGF 956 (1150)
Q Consensus 935 ~~i~gL~Pg~~y~i~~~~~~~~ 956 (1150)
|.|.||.|++.|.+++.+....
T Consensus 64 ~~i~~L~p~t~Y~f~V~A~~~~ 85 (107)
T 1x5a_A 64 VLLTKLQPDTTYIVRVRTLTPL 85 (107)
T ss_dssp EEEESCCSSCEEEEEEEEECSS
T ss_pred EEECCCCCCCEEEEEEEEECCC
Confidence 9999999999999999986543
No 218
>1wf5_A Sidekick 2 protein; FNIII domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=42.69 E-value=33 Score=31.24 Aligned_cols=50 Identities=16% Similarity=0.282 Sum_probs=30.3
Q ss_pred CCccCCcEEEEEeCCCceeE--EEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 906 GQPKDGVSVEARSESKGYYE--ETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~~~~~~--~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+.|+.+-.|+....++.... ....-..-.|.|.||.||+.|.+++.+...
T Consensus 47 ~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 98 (121)
T 1wf5_A 47 NSPLIRYILEMSENNAPWTVLLASVDPKATSVTVKGLVPARSYQFRLCAVND 98 (121)
T ss_dssp SSCEEEEEEEEECTTCCCEEEESSCCTTCCEEEEESCCTTCEEEEEEEEEES
T ss_pred CCcceEEEEEEEcCCCCceEeEcccCCCccEEEECCcCCCCEEEEEEEEEcC
Confidence 34555555555533211111 112234457999999999999999998543
No 219
>1x5y_A Myosin binding protein C, fast-type; fast MYBP-C, fibronectin type III domain containing protein, cytoskeleton, muscle contraction; NMR {Mus musculus} SCOP: b.1.2.1
Probab=42.30 E-value=31 Score=31.06 Aligned_cols=51 Identities=16% Similarity=0.159 Sum_probs=32.7
Q ss_pred CCCccCCcEEEEEeCCCc-eeEEE-eeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 905 SGQPKDGVSVEARSESKG-YYEET-VTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~~~-~~~~~-~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+|.++.+-.|+....+.. ...-. ..-..-.|.+.||.||+.|.+++.+...
T Consensus 36 ~~~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 88 (111)
T 1x5y_A 36 GAGGIDGYLVEYCLEGSEEWVPANKEPVERCGFTVKDLPTGARILFRVVGVNI 88 (111)
T ss_dssp CSSCCCEEEEEEEETTCCCCEESSSSCBSSSEEEEECCCTTCCEEEEEEEEET
T ss_pred CCCcccEEEEEEEECCCCceEEccccCCcccEEEECCCCCCCEEEEEEEEEcC
Confidence 345677777776644321 11100 1123567999999999999999998643
No 220
>2dle_A Receptor-type tyrosine-protein phosphatase ETA; protein-tyrosine phosphatase ETA, R-PTP-ETA, HPTP ETA, protein-tyrosine phosphatase receptor type J; NMR {Homo sapiens}
Probab=41.72 E-value=16 Score=33.50 Aligned_cols=23 Identities=26% Similarity=0.223 Sum_probs=20.3
Q ss_pred CceEEecCCCCCcEEEEEEEEec
Q 001120 932 SGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 932 ~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.=.|.|.||.||+.|.+.+.+..
T Consensus 58 ~t~~~i~gL~PgT~Y~~~V~A~~ 80 (104)
T 2dle_A 58 EPRAVIPGLRSSTFYNITVCPVL 80 (104)
T ss_dssp SSEEECCSCCSSCEEEEEEEEES
T ss_pred CCEEEECCCCCCCEEEEEEEEEE
Confidence 45789999999999999999864
No 221
>2yrz_A Integrin beta-4; GP150, CD104 antigen, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=41.68 E-value=45 Score=30.18 Aligned_cols=24 Identities=25% Similarity=0.447 Sum_probs=20.8
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|.||.|++.|.+++.+..
T Consensus 71 ~~~~~~i~~L~p~t~Y~~~V~A~n 94 (118)
T 2yrz_A 71 AQTSVVVEDLLPNHSYVFRVRAQS 94 (118)
T ss_dssp TCCEEEEESCCTTCEEEEEEEEEE
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEc
Confidence 356799999999999999999754
No 222
>2ee2_A Contactin-1; neural cell surface protein F3, glycoprotein GP135, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=40.46 E-value=56 Score=29.65 Aligned_cols=25 Identities=40% Similarity=0.470 Sum_probs=21.2
Q ss_pred CCceEEecCCCCCcEEEEEEEEecC
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
..-.|.|.||.|++.|.+++.+...
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~A~n~ 96 (119)
T 2ee2_A 72 QEYSARLENLLPDTQYFIEVGACNS 96 (119)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEECS
T ss_pred CEeEEEECCCCCCCEEEEEEEEEcC
Confidence 3458999999999999999998643
No 223
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=40.10 E-value=44 Score=31.15 Aligned_cols=51 Identities=12% Similarity=0.220 Sum_probs=36.5
Q ss_pred CCCCcceEEEEE-eCCCceEE-EEEeCCCce---EEEccccCccEEEEEEcC-CceE
Q 001120 94 GGGPSNVNVELL-SHSGDLIS-SVITSSEGS---YLFKNIIPGKYKLRASHP-NLSV 144 (1150)
Q Consensus 94 g~plaGv~V~L~-~~~g~~i~-~ttTd~~G~---f~f~~L~pG~Y~l~a~~~-g~~~ 144 (1150)
..++..|+|++. +..|+++. ...+.+.|. +.+.+..+|.|.|..++. +..+
T Consensus 45 ~~~~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~~~~~l 101 (108)
T 3d33_A 45 ASPDRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTPSGHL 101 (108)
T ss_dssp SSCCSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEESSCEE
T ss_pred CCcCCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeCCCCEE
Confidence 379999999999 66687664 444554433 455667899999998876 5543
No 224
>2djs_A Ephrin type-B receptor 1; tyrosine-protein kinase receptor EPH-2, NET, HEK6, ELK, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=39.95 E-value=39 Score=30.10 Aligned_cols=25 Identities=28% Similarity=0.573 Sum_probs=21.1
Q ss_pred CCceEEecCCCCCcEEEEEEEEecC
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
..-.|.|.||.|++.|.+++.+...
T Consensus 61 ~~~~~~l~~L~p~t~Y~~~V~A~n~ 85 (108)
T 2djs_A 61 QTNTARIDGLRPGMVYVVQVRARTV 85 (108)
T ss_dssp SSSEEEEESCCTTCEEEEEEEEEES
T ss_pred CccEEEEcCCCCCCEEEEEEEEEeC
Confidence 4467999999999999999997543
No 225
>2ede_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.85 E-value=63 Score=28.89 Aligned_cols=48 Identities=13% Similarity=0.194 Sum_probs=30.8
Q ss_pred ccCCcEEEEEeCC----CceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 908 PKDGVSVEARSES----KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 908 p~~gv~v~~~~~~----~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
++.+-.|+....+ .........-..-.|.|.+|.|++.|.+++.+...
T Consensus 40 ~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 91 (114)
T 2ede_A 40 KITAYILFYTLDKNIPIDDWIMETISGDRLTHQIMDLNLDTMYYFRIQARNS 91 (114)
T ss_dssp CCSEEEEEEESCSSSCTTTSEEEEEETTCCEEEECSCCSSCEEEEEEEEECS
T ss_pred ceeEEEEEEEeCCCCCccceEEEEECCCceEEEEcCCCCCCEEEEEEEEEeC
Confidence 4555555554321 11223334455668999999999999999998643
No 226
>1x4y_A Biregional cell adhesion molecule-related/DOWN- regulated oncogenes (CDON)binding...; fibronectin type III, FN3; NMR {Mus musculus} SCOP: b.1.2.1
Probab=39.81 E-value=20 Score=32.71 Aligned_cols=22 Identities=27% Similarity=0.294 Sum_probs=19.6
Q ss_pred ceEEecCCCCCcEEEEEEEEec
Q 001120 933 GSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 933 G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
=.|.|+||.|++.|.|++.+-.
T Consensus 69 ~~~~i~~L~p~t~Y~~~V~A~n 90 (114)
T 1x4y_A 69 YWHSISHLQPETSYDIKMQCFN 90 (114)
T ss_dssp CEEEECSCCTTCEEEEEEEEEC
T ss_pred eEEEcCCCCCCCEEEEEEEEEc
Confidence 4699999999999999999754
No 227
>2e7h_A Ephrin type-B receptor 4; FN3 domain, tyrosine- protein kinase receptor HTK, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.60 E-value=48 Score=29.71 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=20.2
Q ss_pred ceEEecCCCCCcEEEEEEEEecC
Q 001120 933 GSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 933 G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
-.|.|.||.|++.|.+++.+...
T Consensus 64 ~~~~i~~L~p~t~Y~~~V~A~n~ 86 (109)
T 2e7h_A 64 NRAELRGLKRGASYLVQVRARSE 86 (109)
T ss_dssp SEEEEESCCTTSCEEEEEEEECS
T ss_pred CEEEECCCCCCCeEEEEEEEEeC
Confidence 38999999999999999998643
No 228
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=39.51 E-value=1.8e+02 Score=27.95 Aligned_cols=13 Identities=23% Similarity=0.598 Sum_probs=10.1
Q ss_pred EcCeeEEEEEEee
Q 001120 397 VPPGEYRLSAMAA 409 (1150)
Q Consensus 397 L~pG~Y~l~~~~~ 409 (1150)
++||.|++++...
T Consensus 80 ~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 80 MAAGKYGITATQT 92 (138)
T ss_dssp CCSEEEEEEEEEE
T ss_pred CCCceEEEEEEEE
Confidence 6788888888764
No 229
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=39.44 E-value=5e+02 Score=31.44 Aligned_cols=24 Identities=21% Similarity=0.386 Sum_probs=20.8
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|+||.|+..|.+++.+..
T Consensus 221 ~~~~~~i~~L~P~t~Y~frV~A~n 244 (680)
T 1zlg_A 221 TDERVQLTDIRPSRWYQFRVAAVN 244 (680)
T ss_pred CCCeEEeCCCCCCCEEEEEEEEEe
Confidence 456799999999999999999754
No 230
>2ee3_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.41 E-value=47 Score=30.43 Aligned_cols=23 Identities=30% Similarity=0.273 Sum_probs=20.1
Q ss_pred CceEEecCCCCCcEEEEEEEEec
Q 001120 932 SGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 932 ~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.=.|.|.||.|++.|.|++.+-.
T Consensus 59 ~t~~~l~~L~p~T~Y~v~V~A~~ 81 (108)
T 2ee3_A 59 ATSAMLGPLSSSTTYTVRVTCLY 81 (108)
T ss_dssp CCEEEECSCCSSCEEEEEEEEEC
T ss_pred cCEEEcCCCCCCCEEEEEEEEEe
Confidence 34799999999999999999854
No 231
>2yux_A Myosin-binding protein C, SLOW-type; fibronectin III domain, structural genomics., NPPSFA; NMR {Homo sapiens}
Probab=39.39 E-value=53 Score=30.05 Aligned_cols=51 Identities=10% Similarity=0.163 Sum_probs=34.1
Q ss_pred CCCccCCcEEEEEeCC-CceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 905 SGQPKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+|.|+.+-.|+....+ .....-...-..-.|.|.||.||+.|.+++.+...
T Consensus 45 gg~~i~~Y~v~~~~~~~~~w~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~n~ 96 (120)
T 2yux_A 45 GNAAITGYTIQKADKKSMEWFTVIEHYHRTSATITELVIGNEYYFRVFSENM 96 (120)
T ss_dssp CSSCCCCCCEEEEETTTCCCEEEESSCCSSCCEECCCCSSEEEEEEECCCSS
T ss_pred CCCCceEEEEEEEECCCCceEEeeecCCcCEEEECCCCCCCEEEEEEEEeeC
Confidence 3467888888877543 22121112234557899999999999999997543
No 232
>3l48_A Outer membrane usher protein PAPC; IG fold, greek KEY, cell outer membrane, fimbrium, transmembrane, transport, transport protein; 2.10A {Escherichia coli} PDB: 2kt6_A
Probab=39.35 E-value=24 Score=32.09 Aligned_cols=52 Identities=21% Similarity=0.324 Sum_probs=34.1
Q ss_pred eEEeeeeeEEEEEEecCCCCCccc-ceEEEEeCCCccccceeecCCceEEEeecCCcc
Q 001120 801 FSCQKLSQISVRIYSKDDAGEPIP-SVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGN 857 (1150)
Q Consensus 801 f~~~kl~~i~v~v~~~~~~~~pl~-gvllslsg~~~~r~n~~t~~~G~~~f~~L~PG~ 857 (1150)
|...+--.+.+++.+.+ |+||| |+.+. .+++ +...+.+++|.+.+++|.+..
T Consensus 2 F~t~~G~~~ll~l~~~d--G~plPfGA~V~--d~~g-~~~giVG~~G~vyl~gl~~~g 54 (94)
T 3l48_A 2 FSVLKGKRLFAILRLAD--GSQPPFGASVT--SEKG-RELGMVADEGLAWLSGVTPGE 54 (94)
T ss_dssp -----CCCEEEEEEETT--SCCCCTTCEEE--CTTC-CEEEEBCGGGEEEESSCCTTC
T ss_pred cceEEEEEEEEEEECCC--CCcCCCccEEE--cCCC-ceEEEECCCCEEEEECCCCCC
Confidence 55555556778888876 89999 77664 2222 345689999999999998543
No 233
>1uc6_A CNTF receptor, ciliary neurotrophic factor receptor alpha; cytokine, leukemia inhibitory factor, cytokine receptor; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=39.06 E-value=35 Score=30.91 Aligned_cols=23 Identities=22% Similarity=0.365 Sum_probs=20.4
Q ss_pred CceEEecCCCCCcEEEEEEEEec
Q 001120 932 SGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 932 ~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.-.|.|.||+||+.|.|++++..
T Consensus 66 ~~~~~l~~L~p~t~Y~~~VRa~~ 88 (109)
T 1uc6_A 66 GTAHTITDAYAGKEYIIQVAAKD 88 (109)
T ss_dssp CSEEEETTCCSSSCEEEEEECCB
T ss_pred CCEEEEeCCCCCCEEEEEEEEEe
Confidence 45899999999999999999763
No 234
>1i1r_A GP130, interleukin-6 receptor beta chain; cytokine/receptor complex, GP130; 2.40A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1p9m_A
Probab=39.05 E-value=91 Score=33.34 Aligned_cols=24 Identities=29% Similarity=0.495 Sum_probs=20.7
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|.||.|++.|.+++.+..
T Consensus 258 ~~~~~~l~~L~p~t~Y~~rV~A~n 281 (303)
T 1i1r_A 258 TRSSFTVQDLKPFTEYVFRIRCMK 281 (303)
T ss_dssp CCSEEEECSCCTTCEEEEEEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEEEecc
Confidence 345899999999999999999753
No 235
>1cfb_A Drosophila neuroglian; neural adhesion molecule; HET: NAG; 2.00A {Drosophila melanogaster} SCOP: b.1.2.1 b.1.2.1
Probab=38.49 E-value=3e+02 Score=27.05 Aligned_cols=138 Identities=18% Similarity=0.181 Sum_probs=65.6
Q ss_pred CCCccCCcEEEEEeCC--Cce--eEEEeeCCCceEEecCCCCCcEEEEEEEEecCCCCcceeccCCc--eEEEEecC---
Q 001120 905 SGQPKDGVSVEARSES--KGY--YEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPE--SVTVKVGS--- 975 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~--~~~--~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~--~~~v~v~~--- 975 (1150)
++.++.+-.|+..... +.. .........-.|.+ ||.|++.|.+++.+....|. ..|. ...+...+
T Consensus 31 ~~~~i~~Y~v~~~~~~~~~~w~~~~~~~~~~~~~~~~-~L~p~t~Y~~~V~A~n~~G~-----~~~s~~~~~~~T~~~~P 104 (205)
T 1cfb_A 31 NRSPILHYTIQFNTSFTPASWDAAYEKVPNTDSSFVV-QMSPWANYTFRVIAFNKIGA-----SPPSAHSDSCTTQPDVP 104 (205)
T ss_dssp TTSCCCEEEEEEEESSSTTCCEEEEEEEETTCSEEEE-ECCSSEEEEEEEEEEETTEE-----CCCCCCCCCEEECCCCC
T ss_pred CCCceEEEEEEEecCCCCCCceeeeeccCCCceEEEE-eCCCCCEEEEEEEEEECCcc-----CCCCCCceeEEcCCcCC
Confidence 4566777777766432 211 11222233446777 99999999999997533221 1111 12222111
Q ss_pred -ccceeceEEEEecCCcEEEEEEEEecc---ccccccceEEEEEecCCCCceEEE-EeeCCceeEEeecCCCC-cEEEEE
Q 001120 976 -GDIKGLDFLVFEQPEKTILSGHVEGNR---IKELNSHLLVEIKSASDTSKVESV-ISLPMSNFFQVKDLPKG-KHLLQL 1049 (1150)
Q Consensus 976 -~d~~~~~f~~~~~~~~~~i~g~V~~~~---~~~~~~~l~v~l~~~~~~~~v~~~-~~~~~~~~f~~~~l~~~-~y~v~l 1049 (1150)
.--.++...... ...+.|+ =.... ..-.+-.-+|..+........... ..-.....|.+..|.++ .|.+++
T Consensus 105 ~~~P~~~~~~~~~-~~sv~l~--W~~p~~~~~ng~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 181 (205)
T 1cfb_A 105 FKNPDNVVGQGTE-PNNLVIS--WTPMPEIEHNAPNFHYYVSWKRDIPAAAWENNNIFDWRQNNIVIADQPTFVKYLIKV 181 (205)
T ss_dssp SCCCSCCEEECSS-TTCEEEE--CCCCCGGGTCSSSCEEEEEEEESSTTCCCEEEEECCTTCCEEEECSCCSSCEEEEEE
T ss_pred CCCCeeeEeecCC-CCeEEEE--EECCCccccCCCceEEEEEEEECCCCCCcEEEEecCCCccEEEEcCCCCCcEEEEEE
Confidence 111232222211 1112111 11110 001233555666655443323321 22224567899999998 598888
Q ss_pred Ee
Q 001120 1050 RS 1051 (1150)
Q Consensus 1050 ~s 1051 (1150)
..
T Consensus 182 ~A 183 (205)
T 1cfb_A 182 VA 183 (205)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 236
>2dmk_A Midline 2 isoform 2; midline defect 2, tripartite motif protein 1, midin-2, ring finger protein 60, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.71 E-value=24 Score=33.15 Aligned_cols=26 Identities=27% Similarity=0.507 Sum_probs=21.5
Q ss_pred CceEEecCCCCCcEEEEEEEEecCCC
Q 001120 932 SGSYRLRGLHPDTTYVIKVVKKDGFG 957 (1150)
Q Consensus 932 ~G~~~i~gL~Pg~~y~i~~~~~~~~~ 957 (1150)
.-.|.|+||.||+.|.+++.+....|
T Consensus 79 ~~~~~v~gL~p~t~Y~frV~A~N~~G 104 (127)
T 2dmk_A 79 QNHYTVHGLQSGTRYIFIVKAINQAG 104 (127)
T ss_dssp SSEEEEESCCSSCEEEEEEEEEESSC
T ss_pred CCeEEECCCCCCCEEEEEEEEEeCCC
Confidence 34799999999999999999865434
No 237
>2ed7_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.69 E-value=37 Score=30.68 Aligned_cols=24 Identities=25% Similarity=0.429 Sum_probs=20.9
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|.||.|++.|.+++.+..
T Consensus 72 ~~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 2ed7_A 72 GSLQLTVGNLKPEAMYTFRVVAYN 95 (119)
T ss_dssp TCCEEEECSCCSSSEEEECCEEEE
T ss_pred CceEEEeCCCCCCCEEEEEEEEEc
Confidence 466899999999999999999754
No 238
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=37.61 E-value=63 Score=31.96 Aligned_cols=79 Identities=18% Similarity=0.334 Sum_probs=44.5
Q ss_pred CCcEEEccc---CCccEEEEEEeecccccccCCCeeEE----ceEEEEEEecCcccceeEEEeeeEEEEeeccceeEEEE
Q 001120 484 SDQFLFRDV---LPGKYRLEVKRTSREASSMEDNWCWE----QSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVDAYMT 556 (1150)
Q Consensus 484 ~G~f~f~~L---~PG~Y~v~~~~~~~~~~~~~~~~c~~----~~~~~v~V~~~~~~~v~F~q~Gy~~~i~ssh~~~~~~~ 556 (1150)
++...|.+| ..|.|.|.++.+..+... .|-|. .....|.|.......+.|-.+|-|-.
T Consensus 46 ~~~vtf~~V~~~~aG~Y~l~irYang~~~~---~~~y~~~~~~r~~~v~VNG~~~~~v~fp~Tg~W~~------------ 110 (156)
T 2wz8_A 46 NNYLQFNNVYVPQAGTYRMVVQFANAEVFG---QHSYNNNVVDRYCSISVNGGPEKGHYFFNTRGWNT------------ 110 (156)
T ss_dssp TSCEEEEEEEESSCEEEEEEEEEECCCBC----------CBCCEEEEEEETTCCCEEEEECCCSSTTC------------
T ss_pred CCEEEEEEEecCCCcEEEEEEEEECCCccc---ccccCCccCcceEEEEECCceeeEEEeCCCCCCCc------------
Confidence 345555544 379999999976322211 13333 45667888766555677766552210
Q ss_pred ecCCCeeeEEEeccceeEEecC
Q 001120 557 QQDGSHVPLKVKKGSQHICVES 578 (1150)
Q Consensus 557 ~~~~~~~~l~l~kG~~~~c~~~ 578 (1150)
.....+.+.|++|.|.|.+..
T Consensus 111 -~~~~tv~V~L~aG~NtI~~~~ 131 (156)
T 2wz8_A 111 -YRTDIIDVYLNAGNNTIRFYN 131 (156)
T ss_dssp -CEEEEEEEEECSEEEEEEEEC
T ss_pred -ceEEEEEEEECCCceEEEEEe
Confidence 001123578899999988854
No 239
>2edy_A Receptor-type tyrosine-protein phosphatase F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.61 E-value=41 Score=29.51 Aligned_cols=47 Identities=30% Similarity=0.247 Sum_probs=30.0
Q ss_pred ccCCcEEEEEeCCCceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 908 PKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 908 p~~gv~v~~~~~~~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
++.+-.|+....+..... ...-..-.|.|.||.|++.|.+++.+...
T Consensus 40 ~i~~Y~i~~~~~~~~~~~-~~~~~~~~~~i~~L~p~t~Y~~~V~A~n~ 86 (103)
T 2edy_A 40 RIISYTVVFRDINSQQEL-QNITTDTRFTLTGLKPDTTYDIKVRAWTS 86 (103)
T ss_dssp CCCEEEEEEEETTSCCEE-EEEESSSCCEECSCCTTCCEEEECCEECS
T ss_pred cEeEEEEEEEECCCCccE-EEcCCcceEEEcCCCCCCEEEEEEEEECC
Confidence 455555555543322112 22234567899999999999999997543
No 240
>1wfo_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=37.14 E-value=69 Score=29.46 Aligned_cols=28 Identities=18% Similarity=0.598 Sum_probs=22.9
Q ss_pred EeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 927 TVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 927 ~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
...-..-.|.|.||.|++.|.+++.+..
T Consensus 79 ~~~~~~~~~~i~~L~p~t~Y~~~V~A~n 106 (130)
T 1wfo_A 79 VLAPSARQYTATGLKPESVYLFRITAQT 106 (130)
T ss_dssp EECTTCCEEEEESCCSSSEEEEEEEEEC
T ss_pred EeCCCceEEEEcCCCCCCEEEEEEEEEe
Confidence 3344566899999999999999999864
No 241
>1wfn_A Sidekick 2; FN3, cell adhesion, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=36.89 E-value=60 Score=29.41 Aligned_cols=25 Identities=36% Similarity=0.533 Sum_probs=21.2
Q ss_pred CCCceEEecCCCCCcEEEEEEEEec
Q 001120 930 DTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 930 d~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
-..-.|.|.||.|++.|.+++.+..
T Consensus 71 ~~~~~~~i~~L~p~t~Y~~~V~A~n 95 (119)
T 1wfn_A 71 NVTLEYRVTGLTALTTYTIEVAAMT 95 (119)
T ss_dssp SSCCEEEEESCCTTCEEEEEEEEEC
T ss_pred CCceEEEEcCCCCCCEEEEEEEEEc
Confidence 3455799999999999999999754
No 242
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=36.53 E-value=29 Score=43.30 Aligned_cols=40 Identities=20% Similarity=0.369 Sum_probs=29.5
Q ss_pred cCCCcEEEcccCCccEEEEEEeecccccccCCCeeEE--ceEEEEEEec
Q 001120 482 DDSDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWE--QSFIGVDVGT 528 (1150)
Q Consensus 482 d~~G~f~f~~L~PG~Y~v~~~~~~~~~~~~~~~~c~~--~~~~~v~V~~ 528 (1150)
....+..|.+|+||+|+++++++ .....|. ..++.|+|.+
T Consensus 741 ~~~~~~~ytnL~pG~Y~f~V~a~-------n~~g~w~~~~~~l~i~I~P 782 (795)
T 4a2l_A 741 TDSRTVSYSNLPQGTYQFLVKAA-------NSDGKWNPIPTALEIIVLP 782 (795)
T ss_dssp SSCCEEEEECCCSEEEEEEEEEE-------CTTSCBCSSCEEEEEEECC
T ss_pred CCcCeEEecccCCCeEEEEEEEE-------CCCCccCCCceEEEEEEEC
Confidence 45678999999999999999976 3344454 3466777764
No 243
>1oww_A FN, fibronectin first type III module, CIG; fibronectin type III module, structural protein; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=36.41 E-value=33 Score=31.08 Aligned_cols=34 Identities=26% Similarity=0.558 Sum_probs=24.6
Q ss_pred eEEEeeCCCceEEecCCCCCcEEEEEEEEecCCC
Q 001120 924 YEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFG 957 (1150)
Q Consensus 924 ~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~ 957 (1150)
.|-....---.|.|+||.||..|...+-+.-.+|
T Consensus 52 ke~~Ip~h~nSYtI~GL~P~~~YE~qv~S~~ryG 85 (98)
T 1oww_A 52 KEATIPGHLNSYTIKGLKPGVVYEGQLISIQQYG 85 (98)
T ss_dssp EEEEECSSCCEEEECSCCSSEEEEEEEEEEESSS
T ss_pred eEEEecCccceEEEecCCCCcEEEEEEEEeeccC
Confidence 3434444555799999999999999988754333
No 244
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=36.04 E-value=55 Score=30.03 Aligned_cols=28 Identities=21% Similarity=0.405 Sum_probs=18.0
Q ss_pred EccccCccEEEEE---EcCCceEEeeccEEEEE
Q 001120 125 FKNIIPGKYKLRA---SHPNLSVEVRGSTEVEL 154 (1150)
Q Consensus 125 f~~L~pG~Y~l~a---~~~g~~~~~~~~~~V~v 154 (1150)
+..|++|.|+|.- +.+|... +++..|+|
T Consensus 71 l~~L~~G~YtV~WrvvS~DGH~~--~G~~~FtV 101 (102)
T 2c9r_A 71 ASPLTAGTYKVDWRAVSSDTFPI--TGSVTFKV 101 (102)
T ss_dssp SSCCCSEEEEEEEEECCTTCCCE--EEEEEEEE
T ss_pred CCCCCCceEEEEEEEEecCCCcc--CCEEEEEE
Confidence 3478999999974 3455543 35566655
No 245
>1x5i_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=35.81 E-value=33 Score=31.98 Aligned_cols=26 Identities=23% Similarity=0.434 Sum_probs=21.5
Q ss_pred CCCceEEecCCCCCcEEEEEEEEecC
Q 001120 930 DTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 930 d~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
-..-.|.|+||.|++.|.|++.+...
T Consensus 78 ~~~~~~~i~~L~p~t~Y~~~V~A~n~ 103 (126)
T 1x5i_A 78 YKQRYYTIENLDPSSHYVITLKAFNN 103 (126)
T ss_dssp TTCCEEEECSCCSSCEECCEEEEECS
T ss_pred CCeeEEEEeCCCCCCEEEEEEEEEeC
Confidence 34457999999999999999997543
No 246
>3n1f_C Cell adhesion molecule-related/DOWN-regulated BY; binding sites, calcium, cell adhesion molecules, cell cycle cell LINE, conserved sequence; 1.60A {Homo sapiens} SCOP: b.1.2.1 PDB: 3d1m_C 3n1q_C 3n1m_C 3n1g_C 3n1p_C
Probab=35.58 E-value=45 Score=29.89 Aligned_cols=24 Identities=25% Similarity=0.301 Sum_probs=20.3
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.+.|.||.|++.|.|++.+-.
T Consensus 63 ~~~~~~l~~L~p~t~Y~v~V~A~n 86 (102)
T 3n1f_C 63 SKQWHMIGHLQPETSYDIKMQCFN 86 (102)
T ss_dssp TCSEEEECSCCTTCEEEEEEEEEE
T ss_pred CceEEECCCCCCCCEEEEEEEEEC
Confidence 344789999999999999999753
No 247
>1nqj_A Class 1 collagenase; beta sandwich, metalloprotease, collagen-binding domain, lithium, chlorine, hydrolase; 1.00A {Clostridium histolyticum} SCOP: b.23.2.1 PDB: 2o8o_A 1nqd_A
Probab=35.47 E-value=55 Score=31.05 Aligned_cols=12 Identities=42% Similarity=0.819 Sum_probs=9.6
Q ss_pred ecCCcceEEeec
Q 001120 852 NLFPGNFYLRPL 863 (1150)
Q Consensus 852 ~L~PG~Y~~~~~ 863 (1150)
+|.||+|||+..
T Consensus 94 ~~~pGkYYl~Vy 105 (119)
T 1nqj_A 94 KLRPGKYYLLVY 105 (119)
T ss_dssp EECSEEEEEEEE
T ss_pred EcCCcEEEEEEE
Confidence 477999999764
No 248
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=35.45 E-value=34 Score=42.55 Aligned_cols=41 Identities=24% Similarity=0.571 Sum_probs=29.3
Q ss_pred ecCCCcEEEcccCCccEEEEEEeecccccccCCCeeEEc--eEEEEEEec
Q 001120 481 TDDSDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWEQ--SFIGVDVGT 528 (1150)
Q Consensus 481 Td~~G~f~f~~L~PG~Y~v~~~~~~~~~~~~~~~~c~~~--~~~~v~V~~ 528 (1150)
+....+..|.+|+||+|+++++++ ...-.|.. .++.|+|.+
T Consensus 734 ~~~~~~~~ytnL~pG~Y~f~V~a~-------~~~g~w~~~~~~l~i~I~p 776 (781)
T 3v9f_A 734 INEQNSVTFRNIPPGKYEFLVKAR-------LHNQDWSEDTTSLRIHINP 776 (781)
T ss_dssp ESSCSEEEECSCCSEEEEEEEEEE-------ETTSCCCSCCEEEEEEECC
T ss_pred cCCcceEEEcCCCCceEEEEEEEE-------CCCCccCCCceEEEEEEcC
Confidence 456778999999999999999876 33334444 455666653
No 249
>1q38_A Fibronectin; amyloid fibril, anastellin, extracellular matrix, dynamic fluctuations, conformational exchange, chaps, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=35.32 E-value=35 Score=29.97 Aligned_cols=32 Identities=25% Similarity=0.525 Sum_probs=26.0
Q ss_pred eeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 923 YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 923 ~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..|-..-...-.|.|.||+||..|.+++.+.-
T Consensus 28 wKev~IPgh~nSYtIsGLkPGvtYegQLisV~ 59 (89)
T 1q38_A 28 WKEATIPGHLNSYTIKGLKPGVVYEGQLISIQ 59 (89)
T ss_dssp CEEEEECSSSSCCCCCCCCTTCCEEEEEEEEC
T ss_pred cEEEEcCCccceEEEeccCCCcEEEEEEEeee
Confidence 45555566678899999999999999998754
No 250
>1wis_A KIAA1514 protein; FNIII domain, sidekick-2, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=34.68 E-value=45 Score=30.82 Aligned_cols=51 Identities=16% Similarity=0.131 Sum_probs=33.4
Q ss_pred CCCccCCcEEEEEeC----CCceeEEEe---eCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 905 SGQPKDGVSVEARSE----SKGYYEETV---TDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~----~~~~~~~~~---Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+|.|+.+-.|+.... .+....-.. .-..-.|.|.||.|++.|.+++.+...
T Consensus 44 ~~~~i~~Y~v~~~~~~~~~~~~w~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~ 101 (124)
T 1wis_A 44 GKTSISRWLVEAQVGVVGEGEEWLLIHQLSNEPDARSMEVPDLNPFTCYSFRMRQVNI 101 (124)
T ss_dssp CSSCCSEEEEEECBSCCSTTSCCEEEEEEESCTTCSEEEECSCCTTSEECCCCEEECS
T ss_pred CCCcccEEEEEEEECCCCCCCCCeEeeeEccCCCceEEEeCCCCCCCEEEEEEEEEEC
Confidence 356777777777641 222222111 234558999999999999999998643
No 251
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=34.43 E-value=89 Score=28.08 Aligned_cols=49 Identities=16% Similarity=0.203 Sum_probs=27.5
Q ss_pred EEEEeCCCccccCeE--EEE---cceee----eEeCCCceEEE----C-ccCCccEEEEEEec
Q 001120 279 GRVVDENDMGVEGVK--ILV---DGHER----SITDRDGYYKL----D-QVTSNRYTIEAVKV 327 (1150)
Q Consensus 279 G~V~d~~G~plaGA~--V~l---~G~~~----~~TD~dG~f~l----~-~L~pG~Ytv~~~~~ 327 (1150)
+.++|.+..|+.+.. |.| +|+.+ ..++.+|.|.+ . +.+.|.|+|++...
T Consensus 23 ~~~~~~~~~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~ 85 (102)
T 2p9r_A 23 VVSMDENFHPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 85 (102)
T ss_dssp EEEECGGGCBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred EEEECCCCcCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEEC
Confidence 334454455555442 333 45443 35667776544 2 33569999999864
No 252
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=34.31 E-value=2.2e+02 Score=33.92 Aligned_cols=113 Identities=16% Similarity=0.101 Sum_probs=56.4
Q ss_pred CCceEEecCCCCCcEEEEEEEEecCCCCcceeccCCceEEEEec-Ccc-ceeceEEEEecCCcEEEEEEEEecc-ccccc
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVG-SGD-IKGLDFLVFEQPEKTILSGHVEGNR-IKELN 1007 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~-~~d-~~~~~f~~~~~~~~~~i~g~V~~~~-~~~~~ 1007 (1150)
..-.|.|.||.|+..|.+++.+....|... + .|.+..+.+. ..+ -.++..... ....+.|+ =.... ....+
T Consensus 398 ~~ts~tI~gL~P~T~Y~frV~A~N~~G~~s-p--s~~s~~v~v~T~~~~Ps~~~~~~~-s~tSV~Ls--W~pP~~~ng~I 471 (536)
T 3fl7_A 398 TRTSVTVSDLEPHMNYTFTVEARNGVSGLV-T--SRSFRTASVSINQTEPPKVRLEGR-STTSLSVS--WSIPPPQQSRV 471 (536)
T ss_dssp CSSEEEEECCCTTCEEEEEEEEECTTGGGC-S--CCCEEEEEEECCSCCCCEEEEEEC-CC-CCEEE--EECCTTTTTTC
T ss_pred ccceeEeCCCCCCCEEEEEEEEEecCCCCC-C--CCccceeEEeecccCCCCCceeec-cCCeEEEE--EECCcCCCCcc
Confidence 456799999999999999999864333110 0 2334444332 111 123222111 11112222 11111 01122
Q ss_pred cceEEEEEecCCCCceEEEEeeCCceeEEeecCCCC-cEEEEEEe
Q 001120 1008 SHLLVEIKSASDTSKVESVISLPMSNFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 1008 ~~l~v~l~~~~~~~~v~~~~~~~~~~~f~~~~l~~~-~y~v~l~s 1051 (1150)
....|+.+..+.. .....+ ......|.+..|.++ .|.+++..
T Consensus 472 ~~Y~V~y~~~~~~-~~~~~v-~~~~ts~~l~gL~P~T~Y~frVrA 514 (536)
T 3fl7_A 472 WKYEVTYRKKGDS-NSYNVR-RTEGFSVTLDDLAPDTTYLVQVQA 514 (536)
T ss_dssp SEEEEEEEEC--C-CCCEEE-EESSSEEECCSCCSSCEEEEEEEE
T ss_pred cEEEEEEEECCCC-ceEEEE-cCCCCEEEECCCCCCCEEEEEEEE
Confidence 3455666554333 222212 233467899999999 69998886
No 253
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=34.29 E-value=27 Score=43.25 Aligned_cols=38 Identities=11% Similarity=0.252 Sum_probs=27.5
Q ss_pred CCcEEEcccCCccEEEEEEeecccccccCCCeeEEc--eEEEEEEec
Q 001120 484 SDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWEQ--SFIGVDVGT 528 (1150)
Q Consensus 484 ~G~f~f~~L~PG~Y~v~~~~~~~~~~~~~~~~c~~~--~~~~v~V~~ 528 (1150)
..+..|.+|+||+|+++++++ .....|.. .++.|.|.+
T Consensus 709 ~~~~~ytnL~pG~Y~f~V~a~-------~~~g~w~~~~~~l~I~I~P 748 (758)
T 3ott_A 709 INRITYSNLSYGNYQLIISKL-------ERDGQPSNRPHILNIRILP 748 (758)
T ss_dssp CCEEEECSCCSEEEEEEEEEB-------CTTSCBCSSCEEEEEEECC
T ss_pred cceEEecCCCCccEEEEEEEe-------CCCCCccCccEEEEEEECC
Confidence 456899999999999999975 33334544 456777764
No 254
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=33.98 E-value=1.2e+02 Score=29.65 Aligned_cols=42 Identities=19% Similarity=0.244 Sum_probs=29.1
Q ss_pred cCCCcEEEccc---CCccEEEEEEeecccccccCCCeeEEceEEEEEEe
Q 001120 482 DDSDQFLFRDV---LPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVG 527 (1150)
Q Consensus 482 d~~G~f~f~~L---~PG~Y~v~~~~~~~~~~~~~~~~c~~~~~~~v~V~ 527 (1150)
+++|+..|..| .||.|+-.++.. .....++.||.....|+|.
T Consensus 45 ~a~G~v~F~~i~f~~~G~Y~YtI~E~----~G~~~gvtYD~~~y~VtV~ 89 (141)
T 3klq_A 45 AGSGKASFSPLTFTTVGQYTYRVYQK----PSQNKDYQADTTVFDVLVY 89 (141)
T ss_dssp ESSEEEECCCEEECSCEEEEEEEEEC----CCSSTTEECCCCEEEEEEE
T ss_pred cCCCcEEeCceEeCCCEEEEEEEEEe----CCCCCCcEEcCCEEEEEEE
Confidence 56777777655 499977777632 1224689999998877665
No 255
>1v5j_A KIAA1355 protein, RSGI RUH-008; FN3 domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, cell adhesion; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=33.72 E-value=52 Score=30.30 Aligned_cols=50 Identities=26% Similarity=0.359 Sum_probs=34.3
Q ss_pred CCCccCCcEEEEEeCCCc--eeEEEeeCCCceEEecCCCCCcEEEEEEEEec
Q 001120 905 SGQPKDGVSVEARSESKG--YYEETVTDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~~~--~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.+.|+.|-.|+....++. ...+...-..=.|.+++|.||+.|.+++.+..
T Consensus 33 ~~~~I~gY~vey~~~~~~W~~~~~~~~~~~t~~~v~~L~pg~~Y~FRV~A~n 84 (108)
T 1v5j_A 33 VPKRLDGYVLEGRQGSQGWEVLDPAVAGTETELLVPGLIKDVLYEFRLVAFA 84 (108)
T ss_dssp CSSCCCBEEEEEEETTCCCEEEEEEECSSCCEEECCCCCTTSCEECCBEEEE
T ss_pred CCCCCcEEEEEEEeCCCCcEEeeeecCCCcCEEEeCCCCCCCEEEEEEEEEc
Confidence 356788888888754332 11222222445799999999999999999753
No 256
>1uen_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, fibronectin type III, NG-CAM related cell adhesion molecule, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=33.72 E-value=45 Score=30.39 Aligned_cols=25 Identities=24% Similarity=0.331 Sum_probs=21.1
Q ss_pred CCCceEEecCCCCCcEEEEEEEEec
Q 001120 930 DTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 930 d~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
-..-.|.|.||.|++.|.|++.+..
T Consensus 77 ~~~~~~~i~~L~p~t~Y~~~V~A~n 101 (125)
T 1uen_A 77 GSKTHGMLPGLEPFSHYTLNVRVVN 101 (125)
T ss_dssp SSCSEEEEESCCSSCEEEEEEEEEE
T ss_pred CCccEEEeCCCCCCCEEEEEEEEec
Confidence 3456899999999999999999753
No 257
>2edd_A Netrin receptor DCC; tumor suppressor protein DCC, colorectal cancer suppressor, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.37 E-value=29 Score=32.48 Aligned_cols=23 Identities=39% Similarity=0.580 Sum_probs=20.5
Q ss_pred CceEEecCCCCCcEEEEEEEEec
Q 001120 932 SGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 932 ~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.-.|.|.||.|++.|.+++.+..
T Consensus 77 ~~~~~v~gL~P~T~Y~f~V~A~n 99 (123)
T 2edd_A 77 SLSYTATGLKPNTMYEFSVMVTK 99 (123)
T ss_dssp SSEEEEESCCTTCEEEEEEEECC
T ss_pred ceEEEecCCCCCCEEEEEEEEeC
Confidence 56899999999999999999854
No 258
>1k85_A Chitinase A1; fibronectin type III domain, chitin binding domain, carbohydrase, horizontal gene transfer, hydrolase; NMR {Bacillus circulans} SCOP: b.1.2.1
Probab=31.31 E-value=40 Score=29.03 Aligned_cols=25 Identities=36% Similarity=0.565 Sum_probs=20.9
Q ss_pred ceEEecCCCCCcEEEEEEEEecCCC
Q 001120 933 GSYRLRGLHPDTTYVIKVVKKDGFG 957 (1150)
Q Consensus 933 G~~~i~gL~Pg~~y~i~~~~~~~~~ 957 (1150)
-.|.+.||.||..|.+++.+.+..|
T Consensus 51 ~~~~~~~L~~~t~Y~~~V~A~n~~G 75 (88)
T 1k85_A 51 TTATISGLAADTSYTFTVKAKDAAG 75 (88)
T ss_dssp SEEEECCCCSSCEEEEEEEEEETTT
T ss_pred CEEEeCCCCCCCEEEEEEEEEeCCC
Confidence 5899999999999999999865433
No 259
>3g3l_A Putative uncharacterized membrane-associated PROT; YP_211325.1, putative membrane-associated protein of unknown function; 2.20A {Bacteroides fragilis nctc 9343}
Probab=30.57 E-value=48 Score=34.01 Aligned_cols=53 Identities=13% Similarity=0.245 Sum_probs=43.9
Q ss_pred ceEEEEEEEeC-CCccccCeEEEEcceeee-EeCCCceEEECccCCccEEEEEEeccccc
Q 001120 274 GFSVGGRVVDE-NDMGVEGVKILVDGHERS-ITDRDGYYKLDQVTSNRYTIEAVKVHYKF 331 (1150)
Q Consensus 274 g~sV~G~V~d~-~G~plaGA~V~l~G~~~~-~TD~dG~f~l~~L~pG~Ytv~~~~~~y~~ 331 (1150)
.+-|.|.|.|. .|+-|.-|+|+|+|+.+. .-+++|.|.-++ |.+.+++.+|..
T Consensus 14 KYyIaGtiTdatTGq~LttAtVTlgg~sVt~~fN~~v~ykaeg-----yslvVsa~gYy~ 68 (327)
T 3g3l_A 14 KYYIAGTITDATTGQELTTAKVTLGDKSVTSSFNEQVNYKAEG-----YALVVSADGYYP 68 (327)
T ss_dssp EEEEEEEEEETTTCCBCTTCEEEETTEEECSEEEEEECCCTTC-----EEEEEECTTBCC
T ss_pred eEEEEEEeeeccccceEEEEEEEECCeEEeeeccceeeEeecC-----ceEEEEecCcee
Confidence 36689999998 799999999999999874 667778887654 999999999843
No 260
>2ic2_A CG9211-PA, GH03927P; IHOG, hedgehog, fibronectin type III, protein binding; HET: MSE; 1.30A {Drosophila melanogaster} SCOP: b.1.2.1
Probab=30.57 E-value=31 Score=31.90 Aligned_cols=24 Identities=17% Similarity=0.325 Sum_probs=20.1
Q ss_pred eEEecCCCCCcEEEEEEEEecCCC
Q 001120 934 SYRLRGLHPDTTYVIKVVKKDGFG 957 (1150)
Q Consensus 934 ~~~i~gL~Pg~~y~i~~~~~~~~~ 957 (1150)
.|.|.||.|++.|.+++.+....|
T Consensus 72 ~~~v~~L~p~t~Y~FRV~A~N~~G 95 (115)
T 2ic2_A 72 TASVTDLKPQHTYRFRILAVYSNN 95 (115)
T ss_dssp EEEECSCCSSEEEEEEEEEEETTS
T ss_pred EEEeCCCCCCCEEEEEEEEEeCCC
Confidence 689999999999999999764333
No 261
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=30.53 E-value=4.3e+02 Score=26.49 Aligned_cols=115 Identities=14% Similarity=0.125 Sum_probs=60.9
Q ss_pred eEEEEeCCCceEEec--cCCCCceEEEEEeCCCeEEeeeccceeE---------------------EeeeeeEEEEEEec
Q 001120 760 ALETSTGADGSFIGG--PLYDDITYNVEASKPGYYLRQVGPNSFS---------------------CQKLSQISVRIYSK 816 (1150)
Q Consensus 760 ~~~~~Td~~G~f~~g--pL~~~~~y~v~a~k~gy~l~~~~~~~f~---------------------~~kl~~i~v~v~~~ 816 (1150)
...+.-..+|.|.+. |-.. ..|.|.....|.++... |+.+. +..--...++|...
T Consensus 46 ~~~v~~~~~g~y~v~ftP~~~-G~~~i~V~~~g~~V~gS-Pf~v~V~~~~~~d~~~~~~~G~Gl~~~~~g~~~~F~V~t~ 123 (191)
T 2k7q_A 46 PCLLKRLRNGHVGISFVPKET-GEHLVHVKKNGQHVASS-PIPVVISQSEIGDASRVRVSGQGLHEGHTFEPAEFIIDTR 123 (191)
T ss_dssp ECEEEECTTSCEEEECCCSSS-EEEEEEEEETTEECTTC-SEEEEECGGGTTCGGGCEEESGGGTEEESSSCEEEEEECG
T ss_pred eeEEEECCCCEEEEEEEccCC-EeEEEEEEECCEECCCC-CEEEEEcccCCCCcceEEEeCccccceecCCcEEEEEEeC
Confidence 344555778888654 5444 48888888888766422 11110 10001224444444
Q ss_pred CCCCCcccceEEEEeCCCccccceeecCCc--eEEEeecCCcceEEeecccccccCCCceeEEec
Q 001120 817 DDAGEPIPSVLLSLSGDDGYRNNSVSWAGG--SFHFDNLFPGNFYLRPLLKEYAFSPPAQAIELG 879 (1150)
Q Consensus 817 ~~~~~pl~gvllslsg~~~~r~n~~t~~~G--~~~f~~L~PG~Y~~~~~~key~~~p~~~~i~v~ 879 (1150)
| ....++.+++.|....+....-+.|| .+.|.=-.||.|.+.-...+-.+.-++..|.|.
T Consensus 124 d---ag~g~l~v~V~gp~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~V~ 185 (191)
T 2k7q_A 124 D---AGYGGLSLSIEGPSKVDINTEDLEDGTCRVTYCPTEPGNYIINIKFADQHVPGSPFSVKVT 185 (191)
T ss_dssp G---GCSEEEEEEEEESSCEEEEEEECTTSCEEEEEEESSCEEEEEEEEETTEECTTCSEEEEEE
T ss_pred C---CCCCceEEEEECCCCceEEEEECCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEEEEc
Confidence 2 12334556666654333334455667 445555667888776666655555566666554
No 262
>1va9_A DOWN syndrome cell adhesion molecule like- protein 1B; FNIII domain, dscaml1 protein, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=30.51 E-value=26 Score=31.84 Aligned_cols=22 Identities=23% Similarity=0.249 Sum_probs=19.7
Q ss_pred ceEEecCCCCCcEEEEEEEEec
Q 001120 933 GSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 933 G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
-.|.|.||.|++.|.|++.+..
T Consensus 78 ~~~~i~~L~p~t~Y~~~V~A~n 99 (122)
T 1va9_A 78 EVYTLDNLKKFAQYGVVVQAFN 99 (122)
T ss_dssp EEEEEESCCSSCCEEEEEEEEE
T ss_pred eEEEeCCCCCCCEEEEEEEEEc
Confidence 5799999999999999999754
No 263
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=30.39 E-value=2.8e+02 Score=31.69 Aligned_cols=63 Identities=13% Similarity=0.165 Sum_probs=40.5
Q ss_pred EeccceeeeccEEEec-eEEEEEEEeCCCccccCeEEEEccee-eeEeCCCceEEECccCCccEEEEEEe
Q 001120 259 VRHQHVTVPEKFQVTG-FSVGGRVVDENDMGVEGVKILVDGHE-RSITDRDGYYKLDQVTSNRYTIEAVK 326 (1150)
Q Consensus 259 V~~~~~~l~~~f~~~g-~sV~G~V~d~~G~plaGA~V~l~G~~-~~~TD~dG~f~l~~L~pG~Ytv~~~~ 326 (1150)
+..+.+++.-.+...+ ..|+.+|.+.+++.++.....+++.. ... ...+.++++|.|.|.+..
T Consensus 308 i~~g~~~l~f~~~~~~~~~v~~~v~d~~~~~~~~~~~~v~~~~~~~~-----tl~ls~~~aGhh~lvv~~ 372 (391)
T 2xwx_A 308 IGEQPIQLDLTLEAQGEMSAELTVYNHHQKPLASWSQAMTDGELKSI-----TLELSEAKAGHHMLVSRI 372 (391)
T ss_dssp CCSSCCEEEEEEEEESSEEEEEEEECTTSCEEEEEEEEECTTCEEEE-----EEECSCCCSEEEEEEEEE
T ss_pred ecCCcEEEEEEEEecCceEEEEEEEcCCCCccceeeEEEcCCCcceE-----EEEccCCCCccEEEEEEE
Confidence 3444444432233333 57888999999999998888773321 111 245678999999987765
No 264
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=30.10 E-value=2.6e+02 Score=27.56 Aligned_cols=54 Identities=24% Similarity=0.394 Sum_probs=34.8
Q ss_pred CCCCccCCcEEEEEeCCCc-eeEE-Ee---eCCCceEEecCCCCCcEEEEEEEEecCCC
Q 001120 904 LSGQPKDGVSVEARSESKG-YYEE-TV---TDTSGSYRLRGLHPDTTYVIKVVKKDGFG 957 (1150)
Q Consensus 904 ~~g~p~~gv~v~~~~~~~~-~~~~-~~---Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~ 957 (1150)
.+|.|+.+..|+....+.. .... .. ...++.+.|.+|.|++.|.+++.+....|
T Consensus 139 ~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y~~~~~A~N~~G 197 (215)
T 3mtr_A 139 TGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTYAVRLAALNGKG 197 (215)
T ss_dssp CCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEEEEEEEEEESSC
T ss_pred cCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEEEEEEEEEeCCc
Confidence 3566887777877755422 1111 11 12238899999999999999998754333
No 265
>2edx_A Protein tyrosine phosphatase, receptor type, F; LAR protein, leukocyte antigen related, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=29.61 E-value=34 Score=31.69 Aligned_cols=25 Identities=28% Similarity=0.300 Sum_probs=21.1
Q ss_pred CCCceEEecCCCCCcEEEEEEEEec
Q 001120 930 DTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 930 d~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
-..-.|.|.||.|++.|.+++.+..
T Consensus 76 ~~~~~~~i~~L~p~t~Y~~~V~A~n 100 (134)
T 2edx_A 76 REHSSWDLVGLEKWTEYRVWVRAHT 100 (134)
T ss_dssp TTCSEEEEESCCTTCEEEEEEEEEE
T ss_pred CCccEEEeCCCCCCCEEEEEEEEEc
Confidence 3456899999999999999999754
No 266
>1x5j_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=28.64 E-value=25 Score=32.33 Aligned_cols=24 Identities=38% Similarity=0.642 Sum_probs=20.6
Q ss_pred CceEEecCCCCCcEEEEEEEEecC
Q 001120 932 SGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 932 ~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
.-.|.|.||.|++.|.+++++...
T Consensus 67 ~~~~~i~gL~P~T~Y~f~V~A~~~ 90 (113)
T 1x5j_A 67 TLSYLVTGLKPNTLYEFSVMVTKG 90 (113)
T ss_dssp SSEEEEESCCTTCEECCEEEEECS
T ss_pred cCEEEeCCCCCCcEEEEEEEEecC
Confidence 457999999999999999998643
No 267
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=28.15 E-value=2e+02 Score=26.44 Aligned_cols=52 Identities=12% Similarity=0.245 Sum_probs=37.6
Q ss_pred CCCCcceEEEEEeC-CCceEEEEEeCCCceEEEc--cccCccEEEEEEcCCceEE
Q 001120 94 GGGPSNVNVELLSH-SGDLISSVITSSEGSYLFK--NIIPGKYKLRASHPNLSVE 145 (1150)
Q Consensus 94 g~plaGv~V~L~~~-~g~~i~~ttTd~~G~f~f~--~L~pG~Y~l~a~~~g~~~~ 145 (1150)
..+++.|+|++.+. .|+.+.+-+-..-..+.++ +-..|.|.|...+..|.+.
T Consensus 41 ~~~~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~IeI~~~~~~Lt 95 (101)
T 3sd2_A 41 GRAKDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYTIHIILNDCLLE 95 (101)
T ss_dssp SSCCSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEEEEEEETTEEEE
T ss_pred ccCCCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEEEEEEeCCcEEE
Confidence 37899999999987 5887766543333345555 3357899999998887764
No 268
>2dlh_A Receptor-type tyrosine-protein phosphatase delta; protein-tyrosine phosphatase delta, R-PTP-delta, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=28.07 E-value=30 Score=31.44 Aligned_cols=24 Identities=29% Similarity=0.379 Sum_probs=20.8
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|.||.|++.|.+++.+..
T Consensus 74 ~~~~~~i~~L~p~t~Y~~~V~A~n 97 (121)
T 2dlh_A 74 DSQITTIGNLVPQKTYSVKVLAFT 97 (121)
T ss_dssp SCSEECCBSCCSSCEEEEEEEEEE
T ss_pred CceEEEecCCCCCCEEEEEEEEEe
Confidence 456799999999999999999754
No 269
>1uey_A KIAA0343 protein; immunoglobulin-like beta-sandwich fold, NG-CAM related cell adhesion molecule, fibronectin type III domain, structural genomics; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=27.95 E-value=70 Score=29.38 Aligned_cols=51 Identities=14% Similarity=0.184 Sum_probs=29.4
Q ss_pred CCCccCCcEEEEEeCC---CceeEEEeeCCCceEEecCCCCCcEEEEEEEEecC
Q 001120 905 SGQPKDGVSVEARSES---KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 905 ~g~p~~gv~v~~~~~~---~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
+|.|+.+-.|+..... +..........+-.+.+.||.|++.|.+++.+...
T Consensus 43 ~~~~i~~Y~v~~~~~~~~~~~w~~~~~~~~~~~~~i~~L~p~t~Y~frV~A~n~ 96 (127)
T 1uey_A 43 NNSPITKFIIEYEDAMHKPGLWHHQTEVSGTQTTAQLNLSPYVNYSFRVMAVNS 96 (127)
T ss_dssp CSSCEEEEEEEEEBTTTCTTCEEEEEEEESSCCEEEECCCTTCEECCEEEEEES
T ss_pred CCCCceEEEEEEEECCCCCCccEEEeeeCCCceEEEecCCCCCEEEEEEEEEeC
Confidence 3455666666665332 21222222222233468899999999999997543
No 270
>2dbj_A Proto-oncogene tyrosine-protein kinase MER precursor; C-MER, receptor tyrosine kinase mertk, FN3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.10 E-value=48 Score=30.56 Aligned_cols=26 Identities=8% Similarity=0.128 Sum_probs=21.6
Q ss_pred CCCceEEecCCCCCcEEEEEEEEecC
Q 001120 930 DTSGSYRLRGLHPDTTYVIKVVKKDG 955 (1150)
Q Consensus 930 d~~G~~~i~gL~Pg~~y~i~~~~~~~ 955 (1150)
...-.|.|.||.|++.|.|++.+...
T Consensus 76 ~~~~~~~l~~L~p~t~Y~~~V~A~n~ 101 (124)
T 2dbj_A 76 QNGSRARISVQVHNATCTVRIAAVTR 101 (124)
T ss_dssp STTSCEEEECCCSSSEEEECEEEEES
T ss_pred CCcceEEecCCCCCCEEEEEEEEECC
Confidence 34458999999999999999997543
No 271
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=26.61 E-value=77 Score=29.16 Aligned_cols=28 Identities=14% Similarity=0.278 Sum_probs=17.9
Q ss_pred EccccCccEEEEE---EcCCceEEeeccEEEEE
Q 001120 125 FKNIIPGKYKLRA---SHPNLSVEVRGSTEVEL 154 (1150)
Q Consensus 125 f~~L~pG~Y~l~a---~~~g~~~~~~~~~~V~v 154 (1150)
+..|++|.|+|.- +.+|... +++..|+|
T Consensus 73 l~~L~~G~YtV~WrvvS~DGH~~--~G~~~FtV 103 (104)
T 1lyq_A 73 REPLPAGTYRVDWRAVSSDTHPI--TGNYTFTV 103 (104)
T ss_dssp SSCCCSEEEEEEEEECCTTSCCE--EEEEEEEE
T ss_pred CCCCCCceEEEEEEEEecCCCcc--CCEEEEEE
Confidence 3478999999974 3355543 35566655
No 272
>1x5h_A Neogenin; RGM binding, fibronectin type III domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=26.42 E-value=34 Score=31.72 Aligned_cols=24 Identities=29% Similarity=0.317 Sum_probs=20.8
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|.||.|++.|.+++.+..
T Consensus 75 ~~~~~~i~~L~p~t~Y~~~V~A~n 98 (132)
T 1x5h_A 75 TQLSQLIEGLDRGTEYNFRVAALT 98 (132)
T ss_dssp TCCEEEEECCCSSCEEEEECEEEE
T ss_pred CccEEEeCCCCCCCEEEEEEEEEc
Confidence 456799999999999999999754
No 273
>1ujt_A KIAA1568 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=26.35 E-value=39 Score=31.73 Aligned_cols=24 Identities=38% Similarity=0.224 Sum_probs=20.7
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|.||.|++.|.|++.+-.
T Consensus 73 ~~~~~~l~~L~p~T~Y~~~V~A~n 96 (120)
T 1ujt_A 73 TERSAVLVNLKKGVTYEIKVRPYF 96 (120)
T ss_dssp TCCEEEEESCCSSEEEEEEEEEES
T ss_pred CcCEEEECCCCCCCEEEEEEEEEC
Confidence 345899999999999999999753
No 274
>1wk0_A KIAA0970 protein; fibronectin type III domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.1.2.1
Probab=25.54 E-value=38 Score=32.79 Aligned_cols=24 Identities=25% Similarity=0.358 Sum_probs=20.3
Q ss_pred CCCceEEecCCCCCcEEEEEEEEe
Q 001120 930 DTSGSYRLRGLHPDTTYVIKVVKK 953 (1150)
Q Consensus 930 d~~G~~~i~gL~Pg~~y~i~~~~~ 953 (1150)
-..=.++|.||+|++.|.+++.+-
T Consensus 79 g~~ts~~v~~L~P~T~Y~~rV~A~ 102 (137)
T 1wk0_A 79 GEETNITLNDLKPAMDYHAKVQAE 102 (137)
T ss_dssp ESCSEEEECSCCTTCEECEEEEEE
T ss_pred cCccEEEEcCCCCCCEEEEEEEEE
Confidence 344577999999999999999875
No 275
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=25.54 E-value=2.5e+02 Score=29.92 Aligned_cols=57 Identities=14% Similarity=0.279 Sum_probs=44.6
Q ss_pred eeeeEEEEEEecCCCCCccc------ceEEEEeCCCcccc------ceeecCCceEEEeecCCcceEEeec
Q 001120 805 KLSQISVRIYSKDDAGEPIP------SVLLSLSGDDGYRN------NSVSWAGGSFHFDNLFPGNFYLRPL 863 (1150)
Q Consensus 805 kl~~i~v~v~~~~~~~~pl~------gvllslsg~~~~r~------n~~t~~~G~~~f~~L~PG~Y~~~~~ 863 (1150)
+-+.+..+++|. .+|+|+. |+.+.|.-- +|.. +.....||+|.=.-|+.|+|-+++.
T Consensus 8 P~s~l~G~ivd~-~tGE~i~~~~g~~gv~i~l~E~-g~~~~~~~~~~~~v~~DGtf~Nt~lF~G~Yki~~~ 76 (249)
T 4eiu_A 8 PSETIWGEVVDE-ATGKRVLTDQGSEGIRVRLTEL-SWGDNVQHNPDFYCMMDGTFQNTKIFKGEYNVRID 76 (249)
T ss_dssp CCEEEEEEEEET-TTCCBCCCCSSTTSCEEEEEEC-CSSCCBCCSCCEECCTTSEEEEEEECSEEEEEEEE
T ss_pred CcceeEEEEEEC-CCCCEeeeccCCCceEEEEEec-ccccCCCccCCEEECCCCceeeeeEEcceeEEEeC
Confidence 457788999997 3588885 478887765 5644 3457899999999999999999875
No 276
>3n06_B PRL-R, prolactin receptor; PH dependence, hematopoietic cytokine, hormone-hormone recep complex; 2.00A {Homo sapiens} PDB: 3mzg_B 3n0p_B 3ncb_B 1bp3_B 3d48_R 3nce_B 3ncc_B 3ncf_B 3ew3_B 3npz_B 1f6f_B 2lfg_A
Probab=25.34 E-value=97 Score=31.08 Aligned_cols=26 Identities=23% Similarity=0.538 Sum_probs=21.7
Q ss_pred eCCCceEEecCCCCCcEEEEEEEEec
Q 001120 929 TDTSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 929 Td~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
....-.|.|.||.|++.|.|++++..
T Consensus 161 ~~~~~~~~l~~L~p~t~Y~v~Vra~~ 186 (210)
T 3n06_B 161 AGQQTEFKILSLHPGQKYLVQVRCKP 186 (210)
T ss_dssp EETCSEEEECCCCTTCEEEEEEEEEE
T ss_pred ccCceEEEEeccCCCCEEEEEEEEec
Confidence 34456899999999999999999753
No 277
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=24.79 E-value=9.8e+02 Score=28.81 Aligned_cols=221 Identities=11% Similarity=0.041 Sum_probs=102.5
Q ss_pred eeEEEEEEecCCCCCcccceEEEEeCCCc--cccc-e-ee---cCCceEEEeecC---CcceEEeecc-ccccc-CC---
Q 001120 807 SQISVRIYSKDDAGEPIPSVLLSLSGDDG--YRNN-S-VS---WAGGSFHFDNLF---PGNFYLRPLL-KEYAF-SP--- 871 (1150)
Q Consensus 807 ~~i~v~v~~~~~~~~pl~gvllslsg~~~--~r~n-~-~t---~~~G~~~f~~L~---PG~Y~~~~~~-key~~-~p--- 871 (1150)
|.+.+..... |.|.+.++-...|..+ ++.. + +. +.+..+.|...+ -|.|.+..+. ..|.- .|
T Consensus 92 g~l~v~c~~~---g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~ 168 (731)
T 2v5y_A 92 GLLNVYVKVN---NGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHF 168 (731)
T ss_dssp EEEEEEEEET---TCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEE
T ss_pred ceEEEEEecC---CCCccceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeeccccccccc
Confidence 3445554432 7888888888888643 1111 1 11 344445555543 3544443221 11211 11
Q ss_pred -CceeEEecCCceEEEEEEEEeeeEeEEEeeEcCCCCccCCcEEEEEeCCCc-eeEE--Ee---eCCCceEEecCCCCCc
Q 001120 872 -PAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPKDGVSVEARSESKG-YYEE--TV---TDTSGSYRLRGLHPDT 944 (1150)
Q Consensus 872 -~~~~i~v~~g~~~~v~~~~~r~~~s~~G~v~~~~g~p~~gv~v~~~~~~~~-~~~~--~~---Td~~G~~~i~gL~Pg~ 944 (1150)
..+.+.+.+|++..+...+. |.|.+.+.+-....++. +... .. ...+|.+.|++|.|.+
T Consensus 169 ~~~~~~~v~~G~~v~l~C~~~--------------g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d 234 (731)
T 2v5y_A 169 LRIQNVEVNAGQFATFQCSAI--------------GRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRD 234 (731)
T ss_dssp CCCCCEEEETTSCEEEEEEEE--------------SCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTT
T ss_pred ccccceEEeCCCcEEEEEEeC--------------CCCCCceeEEEecCCCccccccceEEeccccceEEEEEccccccc
Confidence 12346788888877766543 34444333211111110 0000 00 1124899999999998
Q ss_pred EEEEEEEEecCCCCcceeccCCceEEEEecCccceeceEEEEecCCcEEEEEEEEeccccccccceEEEEEecCCCCceE
Q 001120 945 TYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVE 1024 (1150)
Q Consensus 945 ~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d~~~~~f~~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l~~~~~~~~v~ 1024 (1150)
.|..++.+....|.. ...+..+.|...+.-......+... ...+.|+......+-+..+....|+.+.. +....
T Consensus 235 ~g~Y~c~A~n~~G~~---~s~~~~l~V~~~P~~~~~p~~~~~~-~~~v~l~w~~~~~~g~~~i~~Y~v~~~~~--~~~~~ 308 (731)
T 2v5y_A 235 AGKYRCMIRTEGGVG---ISNYAELVVKEPPVPIAPPQLASVG-ATYLWIQLNANSINGDGPIVAREVEYCTA--SGSWN 308 (731)
T ss_dssp CEEEEEEEEETTEEE---ECCCEEEEEECCCCBSSCCEEEEEC-SSCEEEECCCSSBSSCSCCCEEEEEEEES--SSSCE
T ss_pred CeEEEEEEECCCCCc---ceeeEEEEEecCCCCCCCcceeccC-CceEEEEeCCcccCCCCccEEEEEEEEEC--CCCce
Confidence 666666654222210 1223445554443333344444442 22233332211100011233445555543 22222
Q ss_pred EEEeeCCceeEEeecCCCC-cEEEEEEe
Q 001120 1025 SVISLPMSNFFQVKDLPKG-KHLLQLRS 1051 (1150)
Q Consensus 1025 ~~~~~~~~~~f~~~~l~~~-~y~v~l~s 1051 (1150)
. ........+.+..|.++ .|.+++..
T Consensus 309 ~-~~~~~~~~~~i~~L~p~t~Y~~~V~A 335 (731)
T 2v5y_A 309 D-RQPVDSTSYKIGHLDPDTEYEISVLL 335 (731)
T ss_dssp E-EEECCSSEEEECSCCTTCEEEEEEEE
T ss_pred E-EeccCcceEEEeCCCCCCEEEEEEEE
Confidence 2 23344577888899887 57777654
No 278
>2w1n_A O-GLCNACASE NAGJ; hexosaminidase, glycoside hydrolase, fibronectin type-III, beta-N-acetylglucosaminidase, cohesin, hydrolase; 1.80A {Clostridium perfringens}
Probab=24.79 E-value=1.1e+02 Score=32.18 Aligned_cols=42 Identities=19% Similarity=0.423 Sum_probs=34.0
Q ss_pred CCccccCeEEEEcceeeeEeCCCc-eEEECccCCcc-EEEEEEe
Q 001120 285 NDMGVEGVKILVDGHERSITDRDG-YYKLDQVTSNR-YTIEAVK 326 (1150)
Q Consensus 285 ~G~plaGA~V~l~G~~~~~TD~dG-~f~l~~L~pG~-Ytv~~~~ 326 (1150)
++.+|.|-.+.-+|+.++..+.++ .|++.+|.|.+ |++++.+
T Consensus 176 ~~~GI~gY~ly~~g~~v~~v~~~~tsyt~~gLk~~TeYsF~V~A 219 (238)
T 2w1n_A 176 TTEGLEGYILYKDGKKVAEIGKDETSYTFKKLNRHTIYNFKIAA 219 (238)
T ss_dssp CCTTEEEEEEEETTEEEEEEETTCCEEEECSCCTTCEEEEEEEE
T ss_pred CCCCceeEEEEeCCceeEEeeccceEEEecCCCCCCEEEEEEEE
Confidence 345588888888888888888887 89999999987 8887765
No 279
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=23.97 E-value=1.1e+02 Score=30.76 Aligned_cols=29 Identities=28% Similarity=0.493 Sum_probs=23.0
Q ss_pred eeCCCceEEecCCCCCcEEEEEEEEecCC
Q 001120 928 VTDTSGSYRLRGLHPDTTYVIKVVKKDGF 956 (1150)
Q Consensus 928 ~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~ 956 (1150)
+....=+|.|.||.|++.|.+++.+-...
T Consensus 152 v~~~~t~~~l~gL~p~t~Y~~~V~A~~~~ 180 (195)
T 2qbw_A 152 VPYSSSTATISGLKPGVDYTITVYAYSDY 180 (195)
T ss_dssp EETTCSEEEECSCCTTCEEEEEEEEESST
T ss_pred eCCCCCEEEeCCCCCCCEEEEEEEEEeCC
Confidence 33344679999999999999999986543
No 280
>2ekj_A Collagen alpha-1(XX) chain; KIAA1510, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.30 E-value=15 Score=33.27 Aligned_cols=24 Identities=21% Similarity=0.199 Sum_probs=20.8
Q ss_pred CCceEEecCCCCCcEEEEEEEEec
Q 001120 931 TSGSYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 931 ~~G~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
..-.|.|+||.|++.|.|++.+..
T Consensus 59 ~~~~~~l~~L~p~t~Y~~~V~A~~ 82 (105)
T 2ekj_A 59 ARSHVTLPDLQAATKYRVLVSAIY 82 (105)
T ss_dssp TSSEEEECSCCSSCCCBCBBCBBC
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEe
Confidence 456899999999999999999754
No 281
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=23.21 E-value=1.4e+02 Score=28.24 Aligned_cols=57 Identities=21% Similarity=0.327 Sum_probs=36.0
Q ss_pred CcceEEEEEeCCCceEE-EEEeCCCceEEEccc--cCccEEEEEEcCCceEEeecc-EEEEEc
Q 001120 97 PSNVNVELLSHSGDLIS-SVITSSEGSYLFKNI--IPGKYKLRASHPNLSVEVRGS-TEVELG 155 (1150)
Q Consensus 97 laGv~V~L~~~~g~~i~-~ttTd~~G~f~f~~L--~pG~Y~l~a~~~g~~~~~~~~-~~V~v~ 155 (1150)
-..++|.+.+.+|..+. ..+-..||.|.+.-. .+|.|.|.+...|.++. ++ ..|.+.
T Consensus 42 ~~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~--gSPF~v~v~ 102 (124)
T 2dmb_A 42 KGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIP--NSPFTVMAT 102 (124)
T ss_dssp SCCEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEESSCBCT--TCSEEEEEE
T ss_pred CCcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECCEECC--CCCeEEEEE
Confidence 34577888777764332 334457898876533 56899999887776553 23 455554
No 282
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=23.00 E-value=2.2e+02 Score=26.83 Aligned_cols=22 Identities=18% Similarity=0.344 Sum_probs=15.6
Q ss_pred cCCCcEEEccc--CCccEEEEEEe
Q 001120 482 DDSDQFLFRDV--LPGKYRLEVKR 503 (1150)
Q Consensus 482 d~~G~f~f~~L--~PG~Y~v~~~~ 503 (1150)
..+|+|.+.=. .||.|+|.++.
T Consensus 64 ~~dGty~V~Y~p~~~G~y~I~V~~ 87 (124)
T 2dmb_A 64 NEDGTYDIFYTAAKPGTYVIYVRF 87 (124)
T ss_dssp CTTSCEEEEEECSSCEEEEEEEEE
T ss_pred CCCCEEEEEEEcCCCEEEEEEEEE
Confidence 45788776432 48999999874
No 283
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=22.50 E-value=75 Score=39.35 Aligned_cols=26 Identities=19% Similarity=0.484 Sum_probs=21.1
Q ss_pred EeCCCceEEECccCCeeEEEEEEEec
Q 001120 218 VSDADGKFMFKSVPCGQYELVPHYKG 243 (1150)
Q Consensus 218 ~TDa~G~f~f~~LppG~Y~v~~~~~~ 243 (1150)
.++...+.+|.+||||+|++.+....
T Consensus 733 ~~~~~~~~~ytnL~pG~Y~f~V~a~~ 758 (781)
T 3v9f_A 733 TINEQNSVTFRNIPPGKYEFLVKARL 758 (781)
T ss_dssp EESSCSEEEECSCCSEEEEEEEEEEE
T ss_pred CcCCcceEEEcCCCCceEEEEEEEEC
Confidence 44567889999999999999886443
No 284
>2h41_A Fibronectin; beta sandwich, cell adhesion, structural protein; NMR {Homo sapiens} PDB: 2h45_A
Probab=22.39 E-value=1.6e+02 Score=26.29 Aligned_cols=29 Identities=24% Similarity=0.492 Sum_probs=23.3
Q ss_pred eeEEEecCCCcEEEcccCCcc-EEEEEEee
Q 001120 476 KTVSLTDDSDQFLFRDVLPGK-YRLEVKRT 504 (1150)
Q Consensus 476 ~~~~~Td~~G~f~f~~L~PG~-Y~v~~~~~ 504 (1150)
....+....-++.+.+|.||+ |.|.+..-
T Consensus 50 ~~~~v~g~~~s~~l~~L~PgT~Y~V~v~a~ 79 (95)
T 2h41_A 50 QYLDLPSTATSVNIPDLLPGRKYIVNVYQI 79 (95)
T ss_dssp EEEEEETTCCEEEECSCCTTCEEEEEEEEE
T ss_pred eEEECCCCccEEEECCCCCCCEEEEEEEEE
Confidence 345556677899999999998 99999753
No 285
>3klq_A Putative pilus anchoring protein; CNAB fold, inverse IGG fold, polyproline-II-like helix, cell; 1.90A {Streptococcus pyogenes}
Probab=22.18 E-value=2.7e+02 Score=27.07 Aligned_cols=61 Identities=18% Similarity=0.191 Sum_probs=39.4
Q ss_pred ccEEEEEEcCCCcceeeeeeeCCCeEEEEE-E---cCeeEEEEEEeecCCCCCceeeeCceEEEEE
Q 001120 367 NKVKVALTHGPDKVKPQVKQTDNNGNFCFE-V---PPGEYRLSAMAATPESSSGILFLPPYADVVV 428 (1150)
Q Consensus 367 ~~a~Vtl~~g~~~~~~~~~~Td~dG~f~f~-L---~pG~Y~l~~~~~~~~~~~G~~~~p~~~~V~V 428 (1150)
....++|...+.-....+.+.+++|+..|. + .||.|+-.+... +....|+.+....+.|+|
T Consensus 24 ~~Fsf~L~~~dPmP~~~tvt~~a~G~v~F~~i~f~~~G~Y~YtI~E~-~G~~~gvtYD~~~y~VtV 88 (141)
T 3klq_A 24 TPFSVALESIDAMKTIEEITIAGSGKASFSPLTFTTVGQYTYRVYQK-PSQNKDYQADTTVFDVLV 88 (141)
T ss_dssp CEEEEEEEETTTTEEEEEEEEESSEEEECCCEEECSCEEEEEEEEEC-CCSSTTEECCCCEEEEEE
T ss_pred ceEEEEEEeCCCCCCcEEEEEcCCCcEEeCceEeCCCEEEEEEEEEe-CCCCCCcEEcCCEEEEEE
Confidence 446666653321111345667899998885 4 899987777653 233478888888877775
No 286
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=21.82 E-value=80 Score=39.22 Aligned_cols=42 Identities=12% Similarity=0.312 Sum_probs=27.1
Q ss_pred eCCCceEEECccCCeeEEEEEEEecCCeEEEecCceEEEEEe
Q 001120 219 SDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVR 260 (1150)
Q Consensus 219 TDa~G~f~f~~LppG~Y~v~~~~~~~~~~~~~~P~~~~vtV~ 260 (1150)
+....+.++.+||||+|++.+......-.+.-.+..+.|.|.
T Consensus 740 ~~~~~~~~ytnL~pG~Y~f~V~a~n~~g~w~~~~~~l~i~I~ 781 (795)
T 4a2l_A 740 LTDSRTVSYSNLPQGTYQFLVKAANSDGKWNPIPTALEIIVL 781 (795)
T ss_dssp ESSCCEEEEECCCSEEEEEEEEEECTTSCBCSSCEEEEEEEC
T ss_pred CCCcCeEEecccCCCeEEEEEEEECCCCccCCCceEEEEEEE
Confidence 356778999999999999998654433222223344555543
No 287
>1bqu_A Protein (GP130); cytokine receptor, glycoprotein 130, interleukine 6 R beta subunit, signaling protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 1pvh_A 1bj8_A
Probab=21.10 E-value=4.2e+02 Score=26.05 Aligned_cols=25 Identities=12% Similarity=-0.109 Sum_probs=20.8
Q ss_pred CCceEEecCC-CCCcEEEEEEEEecC
Q 001120 931 TSGSYRLRGL-HPDTTYVIKVVKKDG 955 (1150)
Q Consensus 931 ~~G~~~i~gL-~Pg~~y~i~~~~~~~ 955 (1150)
..-.+.|.+| .|++.|.+++.+...
T Consensus 60 ~~~~~~i~~L~~~~t~Y~~~V~A~n~ 85 (215)
T 1bqu_A 60 TPTSCTVDYSTVYFVNIEVWVEAENA 85 (215)
T ss_dssp CTTEEECSSCCCTTSCEEEEEEEEET
T ss_pred CcceEEEcCCccccccEEEEEEEEec
Confidence 3467899999 999999999997643
No 288
>1cd9_B G-CSF-R, protein (G-CSF receptor); class1 cytokine, hematopoietic receptor, signal transduction cytokine; HET: NAG; 2.80A {Mus musculus} SCOP: b.1.2.1 b.1.2.1 PDB: 1pgr_B 1cto_A 1gcf_A
Probab=21.06 E-value=5.2e+02 Score=25.45 Aligned_cols=21 Identities=19% Similarity=0.033 Sum_probs=18.0
Q ss_pred eEEecCCCCCcEEEEEEEEec
Q 001120 934 SYRLRGLHPDTTYVIKVVKKD 954 (1150)
Q Consensus 934 ~~~i~gL~Pg~~y~i~~~~~~ 954 (1150)
.|.+.+|.|+..|.|++.+..
T Consensus 69 ~~~~~~L~~~~~Y~~~V~A~N 89 (215)
T 1cd9_B 69 SIPRKNLLLYQYMAIWVQAEN 89 (215)
T ss_dssp EEEGGGCCTTSCEEEEEEEEE
T ss_pred EECCcccccceEEEEEEEEEC
Confidence 577889999999999998754
No 289
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=21.03 E-value=2.4e+02 Score=25.15 Aligned_cols=25 Identities=8% Similarity=0.133 Sum_probs=19.3
Q ss_pred eeeeCCCeEEEEE---EcCeeEEEEEEe
Q 001120 384 VKQTDNNGNFCFE---VPPGEYRLSAMA 408 (1150)
Q Consensus 384 ~~~Td~dG~f~f~---L~pG~Y~l~~~~ 408 (1150)
...-..||.|++. -.+|.|+|.+.-
T Consensus 39 ~v~d~~dGtY~v~ytP~e~G~h~v~V~~ 66 (93)
T 2d7n_A 39 NITDNKDGTITVRYAPTEKGLHQMGIKY 66 (93)
T ss_dssp EEEECSSSCEEEEECCSSCEEEEEEEEE
T ss_pred EEEECCCCEEEEEEEccCCEEEEEEEEE
Confidence 4455678999887 455999999987
No 290
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.24 E-value=2.2e+02 Score=25.66 Aligned_cols=62 Identities=8% Similarity=0.142 Sum_probs=0.0
Q ss_pred CCCCcceEEEEEeCCC-ceEEEEEeCCCceEEEccc--cCccEEEEEEcCCceEEeeccEEEEEcc
Q 001120 94 GGGPSNVNVELLSHSG-DLISSVITSSEGSYLFKNI--IPGKYKLRASHPNLSVEVRGSTEVELGF 156 (1150)
Q Consensus 94 g~plaGv~V~L~~~~g-~~i~~ttTd~~G~f~f~~L--~pG~Y~l~a~~~g~~~~~~~~~~V~v~~ 156 (1150)
+..-..+++++.+++| ..-...+-..||.|.+.-. .+|.|.|.+...|.++. -....+.|..
T Consensus 26 ~~g~~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~~I~-GSPF~v~V~~ 90 (95)
T 2ee9_A 26 AVRKGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIP-ESPLQFYVNY 90 (95)
T ss_dssp CCCTTSEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEESSCBCT-TCSEEEEECC
T ss_pred CCCCCCEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEECCEECC-CCCeEEEEec
No 291
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=20.05 E-value=3.5e+02 Score=24.50 Aligned_cols=15 Identities=13% Similarity=0.277 Sum_probs=11.8
Q ss_pred ECccCCccEEEEEEe
Q 001120 312 LDQVTSNRYTIEAVK 326 (1150)
Q Consensus 312 l~~L~pG~Ytv~~~~ 326 (1150)
+..|++|+|+|.-+.
T Consensus 71 l~~L~~G~YtV~Wrv 85 (102)
T 2c9r_A 71 ASPLTAGTYKVDWRA 85 (102)
T ss_dssp SSCCCSEEEEEEEEE
T ss_pred CCCCCCceEEEEEEE
Confidence 458999999997554
Done!