Query 001122
Match_columns 1149
No_of_seqs 682 out of 3692
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 12:09:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001122hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v0w_A Phospholipase D; hydrol 100.0 2.5E-35 8.4E-40 354.2 21.0 373 545-1041 66-476 (506)
2 3hsi_A Phosphatidylserine synt 100.0 1.1E-32 3.9E-37 326.2 22.0 353 512-1039 24-401 (458)
3 1djx_A PLC-D1, phosphoinositid 99.9 2.7E-26 9.3E-31 281.1 8.7 172 286-483 402-623 (624)
4 3qr0_A Phospholipase C-beta (P 99.9 8.3E-24 2.8E-28 263.8 9.6 166 286-484 555-771 (816)
5 3ohm_B 1-phosphatidylinositol- 99.9 3.6E-24 1.2E-28 268.3 5.8 166 286-484 630-845 (885)
6 2zkm_X 1-phosphatidylinositol- 99.9 8.6E-24 2.9E-28 264.8 6.1 165 286-483 583-798 (799)
7 1xdp_A Polyphosphate kinase; P 99.9 7.8E-21 2.7E-25 233.3 19.9 271 545-1041 347-633 (687)
8 2fk9_A Protein kinase C, ETA t 99.8 6.9E-21 2.4E-25 194.7 12.4 142 328-483 10-156 (157)
9 2o8r_A Polyphosphate kinase; s 99.8 1.1E-19 3.6E-24 222.0 21.7 270 545-1041 352-639 (705)
10 2dmh_A Myoferlin; beta-sandwic 99.8 5.5E-19 1.9E-23 175.6 15.2 124 345-487 5-136 (140)
11 2ep6_A MCTP2 protein; beta san 99.8 7.2E-19 2.4E-23 173.6 15.1 122 344-484 10-132 (133)
12 3b7y_A E3 ubiquitin-protein li 99.8 1.2E-18 4E-23 176.0 15.6 123 346-484 19-153 (153)
13 1gmi_A Protein kinase C, epsil 99.8 5.8E-19 2E-23 175.2 12.4 130 343-485 2-134 (136)
14 1wfj_A Putative elicitor-respo 99.8 3.9E-19 1.3E-23 175.8 10.6 125 344-488 7-134 (136)
15 3kwu_A MUNC13-1; calcium bindi 99.8 4E-18 1.4E-22 171.1 17.5 121 344-483 14-146 (148)
16 1rlw_A Phospholipase A2, CALB 99.8 2.2E-18 7.4E-23 168.0 10.6 118 346-484 2-125 (126)
17 3m7f_B E3 ubiquitin-protein li 99.7 1.1E-17 3.8E-22 173.3 15.5 124 346-485 7-142 (176)
18 3pyc_A E3 ubiquitin-protein li 99.7 2.9E-17 9.8E-22 161.9 14.3 119 348-482 6-131 (132)
19 2nq3_A Itchy homolog E3 ubiqui 99.7 2.8E-17 9.4E-22 170.6 12.7 127 343-487 32-164 (173)
20 2b3r_A Phosphatidylinositol-4- 99.7 3.6E-16 1.2E-20 155.0 13.2 105 344-464 17-130 (134)
21 1rsy_A Synaptotagmin I; calciu 99.7 3E-16 1E-20 158.5 11.8 105 345-464 40-150 (152)
22 2d8k_A Synaptotagmin VII; exoc 99.6 4.6E-16 1.6E-20 154.9 12.3 105 346-465 25-136 (141)
23 3f04_A Synaptotagmin-1; C2A, c 99.6 2.6E-16 8.8E-21 157.0 10.1 104 345-463 32-141 (143)
24 1a25_A CALB, protein kinase C 99.6 4.4E-16 1.5E-20 156.7 11.5 105 345-465 29-140 (149)
25 1rh8_A Piccolo protein; beta-s 99.6 1.3E-16 4.6E-21 158.7 7.7 107 344-465 15-139 (142)
26 3fbk_A RGS3, RGP3, regulator o 99.6 2.5E-16 8.6E-21 159.4 9.7 106 345-466 25-139 (153)
27 1v27_A Regulating synaptic mem 99.6 3E-16 1E-20 155.7 9.9 106 346-467 20-136 (141)
28 2bwq_A Regulating synaptic mem 99.6 4.2E-16 1.4E-20 152.4 10.7 101 346-462 17-128 (129)
29 3fdw_A Synaptotagmin-like prot 99.6 2.8E-16 9.6E-21 157.9 9.6 108 346-468 22-138 (148)
30 2q3x_A Regulating synaptic mem 99.6 3.4E-16 1.2E-20 161.7 10.4 106 345-465 28-140 (171)
31 2z0u_A WW domain-containing pr 99.6 2.1E-16 7.3E-21 161.1 8.3 103 346-463 42-154 (155)
32 4ggj_A Mitochondrial cardiolip 99.6 9.5E-16 3.3E-20 162.2 13.4 132 545-760 46-178 (196)
33 2r83_A Synaptotagmin-1; C2A-C2 99.6 1.6E-15 5.4E-20 168.1 15.6 128 345-487 17-150 (284)
34 3rdl_A Protein kinase C alpha 99.6 9.2E-16 3.1E-20 151.4 12.2 105 345-465 14-125 (137)
35 1wfm_A Synaptotagmin XIII; C2 99.6 1.2E-15 4E-20 152.0 12.8 102 346-465 25-133 (138)
36 2dmg_A KIAA1228 protein; beta- 99.6 7.6E-16 2.6E-20 153.4 10.6 107 346-468 23-139 (142)
37 2chd_A Rabphilin-3A, exophilin 99.6 1.3E-15 4.4E-20 151.8 10.6 105 345-464 27-140 (142)
38 1w15_A Synaptotagmin IV; metal 99.6 1.3E-15 4.4E-20 153.8 9.5 107 346-469 29-143 (153)
39 1ugk_A Synaptotagmin IV, KIAA1 99.6 3.6E-15 1.2E-19 148.0 12.0 105 345-464 20-133 (138)
40 3n5a_A Synaptotagmin-7; calciu 99.6 8.7E-16 3E-20 151.6 7.5 107 346-469 15-129 (138)
41 2cjt_A UNC-13 homolog A, MUNC1 99.6 5E-15 1.7E-19 146.7 11.9 116 346-482 4-130 (131)
42 1tjx_A Similar to synaptotagmi 99.6 5.7E-15 1.9E-19 150.2 12.3 90 346-450 24-121 (159)
43 2cm5_A Rabphilin-3A; protein t 99.6 6.8E-15 2.3E-19 150.8 12.5 106 346-468 36-149 (166)
44 2enp_A B/K protein; C2 type 1, 99.6 2.7E-15 9.1E-20 150.5 8.1 109 346-463 25-140 (147)
45 3l9b_A Otoferlin; C2-domain, b 99.5 2.1E-14 7.3E-19 142.8 11.7 117 348-487 22-143 (144)
46 1byr_A Protein (endonuclease); 99.5 7.2E-14 2.4E-18 140.9 12.7 133 545-759 14-148 (155)
47 1dqv_A Synaptotagmin III; beta 99.5 6.7E-14 2.3E-18 156.6 12.5 124 346-485 19-150 (296)
48 1byr_A Protein (endonuclease); 99.5 6.8E-14 2.3E-18 141.0 11.4 119 841-1040 14-133 (155)
49 2cjs_A UNC-13 homolog A, MUNC1 99.5 4.4E-14 1.5E-18 145.8 10.0 85 347-452 14-99 (167)
50 4gel_A Mitochondrial cardiolip 99.5 4.6E-14 1.6E-18 151.0 9.9 153 541-760 54-210 (220)
51 3jzy_A Intersectin 2; C2 domai 99.5 1.3E-13 4.6E-18 164.9 14.3 115 346-482 386-506 (510)
52 3bxj_A RAS GTPase-activating p 99.5 5.4E-15 1.8E-19 176.7 1.2 124 343-486 7-159 (483)
53 4ggj_A Mitochondrial cardiolip 99.5 1.4E-13 4.7E-18 145.6 10.2 132 841-1064 46-177 (196)
54 3nsj_A Perforin-1; pore formin 99.4 3.3E-13 1.1E-17 162.5 13.9 107 347-483 394-503 (540)
55 1cjy_A CPLA2, protein (cytosol 99.4 3.3E-13 1.1E-17 167.2 7.6 103 346-463 17-125 (749)
56 2r83_A Synaptotagmin-1; C2A-C2 99.4 3.1E-12 1.1E-16 141.6 14.3 90 346-450 149-246 (284)
57 1dqv_A Synaptotagmin III; beta 99.3 1.1E-12 3.7E-17 146.8 3.6 109 346-470 151-267 (296)
58 1xdp_A Polyphosphate kinase; P 99.1 1.3E-10 4.6E-15 143.0 12.1 119 844-1041 350-480 (687)
59 4gel_A Mitochondrial cardiolip 99.1 1.9E-10 6.4E-15 122.9 10.9 138 841-1041 58-195 (220)
60 3pfq_A PKC-B, PKC-beta, protei 99.1 1.3E-10 4.6E-15 144.2 10.4 107 344-466 169-282 (674)
61 1yrk_A NPKC-delta, protein kin 99.1 1.6E-09 5.6E-14 105.0 14.1 89 383-483 27-124 (126)
62 2enj_A NPKC-theta, protein kin 99.0 2.6E-09 9E-14 104.8 13.6 109 349-483 12-129 (138)
63 3hsi_A Phosphatidylserine synt 98.7 3.1E-08 1.1E-12 117.4 11.9 122 841-1024 37-165 (458)
64 1v0w_A Phospholipase D; hydrol 98.5 2E-07 7E-12 111.8 10.3 137 840-1039 65-208 (506)
65 2o8r_A Polyphosphate kinase; s 98.1 6.9E-06 2.3E-10 101.0 12.0 120 843-1041 354-487 (705)
66 3qph_A TRMB, A global transcri 94.9 0.0098 3.4E-07 67.8 2.7 35 1003-1040 192-230 (342)
67 3qph_A TRMB, A global transcri 94.2 0.077 2.6E-06 60.5 7.9 47 545-604 119-165 (342)
68 2f5t_X Archaeal transcriptiona 93.2 0.12 4E-06 55.9 6.8 50 545-607 10-59 (233)
69 2c1l_A Restriction endonucleas 84.5 1.7 5.8E-05 46.7 7.1 40 998-1039 103-145 (358)
70 2wxf_A Phosphatidylinositol-4, 77.6 5.3 0.00018 51.2 9.6 70 346-433 216-294 (940)
71 2yrb_A Protein fantom; beta sa 74.3 8.3 0.00028 38.9 8.1 97 386-484 45-150 (156)
72 3hhm_A Phosphatidylinositol-4, 68.4 13 0.00044 48.2 9.9 89 342-447 350-452 (1091)
73 3l4c_A Dedicator of cytokinesi 65.5 10 0.00035 40.4 6.8 38 397-434 79-119 (220)
74 1e7u_A Phosphatidylinositol 3- 57.9 37 0.0013 43.6 11.2 75 343-433 214-296 (961)
75 2y3a_A Phosphatidylinositol-4, 51.9 10 0.00035 49.3 4.8 75 341-433 347-430 (1092)
76 2f5t_X Archaeal transcriptiona 42.7 33 0.0011 36.8 6.2 50 840-909 9-58 (233)
77 1q32_A TDP1P;, tyrosyl-DNA pho 31.0 25 0.00087 42.2 3.3 42 994-1035 426-487 (544)
78 1jy1_A TDP1, tyrosyl-DNA phosp 22.0 54 0.0018 38.6 3.9 49 986-1035 335-399 (464)
No 1
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=100.00 E-value=2.5e-35 Score=354.17 Aligned_cols=373 Identities=16% Similarity=0.136 Sum_probs=203.4
Q ss_pred HHHHHHHHHHHHhhcceEEEEEeccceeeEEeCCCCchHHHHHHHHHHHhhcC--CcEEEEEecCCCccccccccccccc
Q 001122 545 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEG--VRVLLLVWDDPTSRSILGYKMDGVM 622 (1149)
Q Consensus 545 ~~f~al~eAI~~Ar~sI~I~~W~~~p~i~L~rd~~~~~g~~L~dlL~~kA~rG--VkVrILvwD~~gs~~~~g~k~~g~~ 622 (1149)
++|++|+++|++||++|+|++|.+ ++++ ..+.+|.++|++||+|| |+||||+ |+.++....
T Consensus 66 ~~~~~l~~~I~~Ak~~I~i~~y~~------~~~d--~~g~~i~~aL~~aa~rGp~V~Vril~-D~~g~~~~~-------- 128 (506)
T 1v0w_A 66 RLLAKMTENIGNATRTVDISTLAP------FPNG--AFQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMN-------- 128 (506)
T ss_dssp HHHHHHHHHHHTCSSEEEEEEESS------CCCH--HHHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCC--------
T ss_pred HHHHHHHHHHHHhccEEEEEEeec------cCCC--hHHHHHHHHHHHHHhCCCCcEEEEEE-eCccccccc--------
Confidence 689999999999999999999953 1333 36789999999999999 9999997 664432110
Q ss_pred ccccHHHHHHhhcCCc------EEEEccCcccccccccccccccccccccceeEEecCCCCCCCccEEEEEccccCCCCC
Q 001122 623 QTHDEETRRVFKHSSV------KVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGR 696 (1149)
Q Consensus 623 ~t~~~~t~~~l~~~gV------~v~l~p~~~~~~~~~~~~~~~~~~~~HHQKiVVVD~~~~~~~r~~vAFVGGiDL~dgR 696 (1149)
.......+.|+..|+ .+... . |.. . ...+.+||+|++|||++ +||+||+||++++
T Consensus 129 -~~~~~~~~~L~~~g~~~~~~~~~~~~-~-------~~~-~-~~~~~r~H~K~~ViD~~--------~a~~Gg~Nl~~d~ 189 (506)
T 1v0w_A 129 -VIPSKYRDELTAKLGKAAENITLNVA-S-------MTT-S-KTAFSWNHSKILVVDGQ--------SALTGGINSWKDD 189 (506)
T ss_dssp -CHHHHHHHHHHHHHGGGGGGEEEEEE-E-------ECS-B-TTTTBCBCCCEEEETTT--------EEEEESCCCCHHH
T ss_pred -cCCHHHHHHHHhcccceeecCccccc-c-------ccc-c-CCccccceeeEEEECCc--------EEEeeccccCccc
Confidence 001223344444333 22210 0 000 0 01124899999999996 9999999998766
Q ss_pred CCCCCCCcccccccccCCCCCCCcccCCCCCCCCCCeeeeeeEEcCHHHHHHHHHHHHHHHhhcCCC-CccccC---c--
Q 001122 697 YDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPH-GIKKLK---S-- 770 (1149)
Q Consensus 697 wDt~~H~l~~~l~~~~~~Dy~np~~~~~~~~~pr~PWHDv~vrI~GPaa~Dl~~~F~qrWn~at~~~-~~~~l~---~-- 770 (1149)
|.+. ..+|||++++|+||+|.++...|.++|+...... .+..+. .
T Consensus 190 y~~~-----------------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~~~~~~~~~~~~~~~~ 240 (506)
T 1v0w_A 190 YLDT-----------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKSNIASVWFAASGN 240 (506)
T ss_dssp HTSS-----------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHHTTTSTTTEEEEESTT
T ss_pred cccC-----------------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhccccCChhhhccccccc
Confidence 6421 1479999999999999999999999999664210 000000 0
Q ss_pred ---chhhhhhhccCCCccCCCCCCCcccCCCCCceEEEEEeccCCcccccCCCChhh-----hhccccccC---ccc---
Q 001122 771 ---GDDALLRIERIPGIIGISDAPSVRENDAESWHVQVIFRSIDSTSVRGFPKDPKE-----ATSKNLVCG---KNV--- 836 (1149)
Q Consensus 771 ---~~~~ll~~~~~p~~~~~~~~p~~~~~~~~~~~VQ~vlRS~~~~s~~~fP~~P~~-----~~~~~l~~g---~~~--- 836 (1149)
... ... ...|. . ....+...+| +...+........|..... +....++.+ +..
T Consensus 241 ~~~~~~-~~~-~~~p~---------~-~~~~~~~~~~-~~~~~~~~i~~~~P~~~~~~~~w~~~~~~~~~d~P~~~~~~~ 307 (506)
T 1v0w_A 241 AGCMPT-MHK-DTNPK---------A-SPATGNVPVI-AVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTNADR 307 (506)
T ss_dssp CCCCTT-HHH-HHSCS---------S-CCCCSSEEEE-EEECCCSSSCSCCTTCCCCCCCCCCSSSCSSTTCCCTTTSCH
T ss_pred cccCch-hcc-ccCcc---------c-Ccccccccce-ecccccceeecCCccccccccCcccccceeeccccccccCcc
Confidence 000 000 00010 0 0111222333 2221111111111110000 000000000 000
Q ss_pred --cchHHHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCC
Q 001122 837 --LIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGV 914 (1149)
Q Consensus 837 --~~e~sI~~ayl~aI~~Ar~~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rgv~V~IVlP~~Peg~ 914 (1149)
..+..|..+|+++|.+||++|||++|||.+--. . ...+...++.+|.+|. ++||+|+||+|..++..
T Consensus 308 ~~~~~~~~~~~~~~~I~~A~~~I~I~tq~~~pyf~-p--------~~~~~~~i~~aL~~Aa--~rGV~VrIl~~~~~~~~ 376 (506)
T 1v0w_A 308 DYDTVNPEESALRALVASAKGHIEISQQDLNATCP-P--------LPRYDIRLYDALAAKM--AAGVKVRIVVSDPANRG 376 (506)
T ss_dssp HHHHHCHHHHHHHHHHHTCSSEEEEEESCSSCCTT-T--------SCSCCHHHHHHHHHHH--HTTCEEEEEECCGGGCC
T ss_pred cccccccHHHHHHHHHhCcCcEEEEEecccccccc-C--------cccchHHHHHHHHHHH--hCCCcEEEEeCCCCchH
Confidence 013579999999999999999999966653110 0 0001235677777764 58999999999865221
Q ss_pred CCCchhHHHHHHHHHh-HhhHHH---H--HHHHHHHcCCceeecc--cccccccccCCcccccccCCCCCCCCCCCCChh
Q 001122 915 PTGAATQRILFWQHKT-MQMMYE---T--IYKALVEVGLEGAFSP--QDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPE 986 (1149)
Q Consensus 915 p~~~s~~~il~~~~rT-m~~~~~---s--i~~~L~~~Gv~~~~~P--~dYl~f~~L~~re~~~~~~~~~~~~~~~~n~~~ 986 (1149)
++.++... +..+.+ . .-..|.+.|+.. ..+ ..-+.++.++... .+..
T Consensus 377 --------~~~~a~~~~~~~L~~~~~~l~~gv~ll~~g~~e-~~~~~~~~l~i~~~~~~~---~~~~------------- 431 (506)
T 1v0w_A 377 --------AVGSGGYSQIKSLSEISDTLRNRLANITGGQQA-AKTAMCSNLQLATFRSSP---NGKW------------- 431 (506)
T ss_dssp --------------CCCCSCTHHHHHHHHHHHHHHHTSHHH-HHHHHHHHEEEEECCSSS---SSSC-------------
T ss_pred --------HHHHhHHHHHHHHHHhhhhhcccchhcccccch-hccccccceeeeeccccC---cccc-------------
Confidence 11111100 000000 0 011233333200 000 0000111111000 0000
Q ss_pred hhccccCcccceeeeEEEEEeCeEEEEcccCcccccCCCCCCcceEEEEeCcchh
Q 001122 987 ALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 987 ~~~~~~r~~~iYVHSKlmIVDD~~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
......++|+|+|||||++++|||+|||.||| +|+++.|++++++
T Consensus 432 -----~~~~~~~lHaK~~vvD~~~~~vGS~N~d~rS~-----~E~~l~i~~~~~a 476 (506)
T 1v0w_A 432 -----ADGHPYAQHHKLVSVDSSTFYIGSKNLYPSWL-----QDFGYIVESPEAA 476 (506)
T ss_dssp -----TTSCCCCBCCEEEEETTTEEEEESCCSSCCCS-----BCEEEEEECHHHH
T ss_pred -----ccCccccceEEEEEECCcEEEEeCCCCCCcch-----hhceeEecCHHHH
Confidence 00113589999999999999999999999999 3999999998753
No 2
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=100.00 E-value=1.1e-32 Score=326.22 Aligned_cols=353 Identities=14% Similarity=0.086 Sum_probs=213.1
Q ss_pred cccceeEecccccCCCCCCCceeecCCCccchhHHHHHHHHHHHHhhcceEEEEEeccceeeEEeCCCCchHHHHHHHHH
Q 001122 512 RKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLR 591 (1149)
Q Consensus 512 ~~Gn~V~ly~dg~~~~~~~p~i~l~~g~~y~~~~~f~al~eAI~~Ar~sI~I~~W~~~p~i~L~rd~~~~~g~~L~dlL~ 591 (1149)
..||+|+++.+|+ ++|++++++|++||++|+|++|.| .++ ..|..|.++|+
T Consensus 24 ~~~n~v~~l~~g~--------------------~~~~~l~~~I~~A~~~I~i~~~~~-------~~d--~~g~~l~~aL~ 74 (458)
T 3hsi_A 24 LQAEQIEFLGSSA--------------------EFKTQIIELIRNAKKRIYVTALYW-------QKD--EAGQEILDEIY 74 (458)
T ss_dssp CCGGGEEECCCHH--------------------HHHHHHHHHHHTCSSEEEEEESCB-------CSS--HHHHHHHHHHH
T ss_pred ccCCeEEEEeCHH--------------------HHHHHHHHHHHhcCCEEEEEEEEE-------ecC--cHHHHHHHHHH
Confidence 3589999999996 789999999999999999999954 444 37889999999
Q ss_pred HHhhc--CCcEEEEEecCCC-cccccccccccccccc-cHHHHHHhhc--CCcEEE--Ecc-Cccccccccccccccccc
Q 001122 592 SKSQE--GVRVLLLVWDDPT-SRSILGYKMDGVMQTH-DEETRRVFKH--SSVKVL--LCP-RIAGKRHSWAKQKEVGTI 662 (1149)
Q Consensus 592 ~kA~r--GVkVrILvwD~~g-s~~~~g~k~~g~~~t~-~~~t~~~l~~--~gV~v~--l~p-~~~~~~~~~~~~~~~~~~ 662 (1149)
+||+| ||+||||+ |+.. .+...| ..... .......|.. ++|+|. ++. +.. + ...+
T Consensus 75 ~aa~r~~GV~Vril~-D~~~~~r~~~g-----~~~~~~~~~~~~~L~~~g~nv~v~~~~f~~p~~-----~-----~~~~ 138 (458)
T 3hsi_A 75 RVKQENPHLDVKVLI-DWHRAQRNLLG-----AEKSATNADWYCEQRQTYQLPDDPNMFFGVPIN-----T-----REVF 138 (458)
T ss_dssp HHHHHSTTCEEEEEE-ETTGGGSCCC----------CCHHHHHHHHHHHHTCTTCCCCEEEECSS-----S-----SGGG
T ss_pred HHHhcCCCCEEEEEE-ECccccccccc-----cccccccHHHHHHHHhhCCCceEeeeecCCccc-----c-----cccc
Confidence 99999 99999997 7631 111011 00000 1122333333 337776 553 211 1 1245
Q ss_pred ccccceeEEecCCCCCCCccEEEEEccccCCCCCCCCCCCCcccccccccCCCCCCCcccCCCCCCCCCCeeeeeeEEcC
Q 001122 663 YTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDG 742 (1149)
Q Consensus 663 ~~HHQKiVVVD~~~~~~~r~~vAFVGGiDL~dgRwDt~~H~l~~~l~~~~~~Dy~np~~~~~~~~~pr~PWHDv~vrI~G 742 (1149)
.++|+|++|||++ + ++||+||+++|+... .....|+| +.|.|
T Consensus 139 ~r~H~Ki~viD~~--------v-~~~G~Ni~d~y~~~~---------------------------~~~~~drd--~~i~g 180 (458)
T 3hsi_A 139 GVLHVKGFVFDDT--------V-LYSGASINNVYLHQF---------------------------EKYRYDRY--QKITH 180 (458)
T ss_dssp CCEECCEEEETTE--------E-EEESCCBSTTTTTCS---------------------------SCCEECCE--EEEEC
T ss_pred CcceeeEEEECCC--------E-EEEeeecCHHHhcCC---------------------------cccCcchh--hhhcC
Confidence 7899999999995 7 556699999776321 01234778 44899
Q ss_pred HHHHHHHHHHH--HHHHhhcCCCCcccc--Cc---chhhhhhh-ccCCCccCCCCCCCcccCCCCCceEEEEEeccCCcc
Q 001122 743 PAAYDVLTNFE--ERWRKASKPHGIKKL--KS---GDDALLRI-ERIPGIIGISDAPSVRENDAESWHVQVIFRSIDSTS 814 (1149)
Q Consensus 743 Paa~Dl~~~F~--qrWn~at~~~~~~~l--~~---~~~~ll~~-~~~p~~~~~~~~p~~~~~~~~~~~VQ~vlRS~~~~s 814 (1149)
|.+.|....|. ..|+...-.. +... .. +......+ +.++... ... .+....+...+| +..-.
T Consensus 181 ~~~~D~~~~~~~~~~~~g~~v~~-l~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~--~~~~~~~~~~~~-v~p~~---- 250 (458)
T 3hsi_A 181 AELADSMVNFINDYLLDFSAVYP-LDVTNRPRTKEIRGNIRAYRKDLAQNG--EYS--LKSAVKLPNVLS-VSPLF---- 250 (458)
T ss_dssp HHHHHHHHHHHHHTTCCTTTCEE-SSSSCCCCGGGTHHHHHHHHHHHHHHC--CCC--CSSCBSSCSSCE-EEEEE----
T ss_pred chHHHHHHHHHHhhhhcCccchh-hHHHhcccchhhHHHHHHHHHhhhhcc--ccc--ccccCCCCceEE-EecCC----
Confidence 99999999984 4465322100 0000 00 00000000 0000000 000 000000111233 21100
Q ss_pred cccCCCChhhhhccccccCccccchHHHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHH
Q 001122 815 VRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADK 894 (1149)
Q Consensus 815 ~~~fP~~P~~~~~~~l~~g~~~~~e~sI~~ayl~aI~~Ar~~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~a 894 (1149)
.| +. .+..|..+|+++|.+|++.|||+++||+++. ++..+|..|
T Consensus 251 ------~~----------~~---~~~~i~~~~~~lI~~A~~~I~I~tpYf~p~~-----------------~~~~aL~~A 294 (458)
T 3hsi_A 251 ------GL----------GA---SGNELNQVIEDLFLQVQKKLVICTPYFNFPR-----------------TLQHKIATL 294 (458)
T ss_dssp ------EE----------SS---SSCHHHHHHHHHHHTCSSEEEEECSSSCCCH-----------------HHHHHHHHH
T ss_pred ------CC----------CC---chhHHHHHHHHHHHhcccEEEEEEeccCCCH-----------------HHHHHHHHH
Confidence 00 00 1346899999999999999999999999864 466666665
Q ss_pred HHcCCCcEEEEEecCCCCCCCCCchhHHHHHHHHHhH--hhHHHHH---HHHHHHcC---CceeecccccccccccCCcc
Q 001122 895 IRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTM--QMMYETI---YKALVEVG---LEGAFSPQDYLNFFCLGNRE 966 (1149)
Q Consensus 895 i~a~rgv~V~IVlP~~Peg~p~~~s~~~il~~~~rTm--~~~~~si---~~~L~~~G---v~~~~~P~dYl~f~~L~~re 966 (1149)
+++||+|+||+|...........+++++.+..... ....+.+ ++.|.++| ++++. |
T Consensus 295 --a~rGV~VrIi~~~~~and~y~~~~~~~~~~~~~~~lye~~~~~f~~~~~~l~~~G~i~V~i~~----~---------- 358 (458)
T 3hsi_A 295 --LENGKRVEIIVGDKVANDFYIPPEQPFKMAGALPYLYESNLRRFCEKFETQIESGQLVVRLWR----D---------- 358 (458)
T ss_dssp --HTTTCEEEEEEECGGGSTTCCCTTSCCCGGGGHHHHHHHHHHHHHHHTHHHHHHTSEEEEEEC----B----------
T ss_pred --HHCCCeEEEEECCccccCCccCCcchhhhhcchHHHHHHhhhhhHHHHHHHHhCCCeEEEEEe----c----------
Confidence 47899999999985311100011122222221110 0000111 34677788 44431 0
Q ss_pred cccccCCCCCCCCCCCCChhhhccccCcccceeeeEEEEEeCeEEEEcccCcccccCCCCCCcceEEEEeCcc
Q 001122 967 VIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPE 1039 (1149)
Q Consensus 967 ~~~~~~~~~~~~~~~~n~~~~~~~~~r~~~iYVHSKlmIVDD~~viIGSANiN~RSm~G~~DsEiav~i~dp~ 1039 (1149)
...++|+|+|||||++++|||+|||.||+. +|+|++++|++++
T Consensus 359 ----------------------------~~~~lHaK~~vvD~~~~~vGS~N~d~RS~~--lN~E~~~~i~~~~ 401 (458)
T 3hsi_A 359 ----------------------------GDNTYHLKGVWVDDRYILLTGNNLNPRAWR--LDAENGLLIYDPQ 401 (458)
T ss_dssp ----------------------------TTBEECCCEEEETTTEEEEECCCCSHHHHH--TCEEEEEEEECTT
T ss_pred ----------------------------CCCceeEEEEEECCeEEEecCCCCCcchhh--hCceeEEEEeCCc
Confidence 124899999999999999999999999998 8999999999986
No 3
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.92 E-value=2.7e-26 Score=281.09 Aligned_cols=172 Identities=27% Similarity=0.318 Sum_probs=148.8
Q ss_pred CCCCCcccCCCCCcc-cCCcccCCCCcCCCCCCcccCCCCCCCCCcccccC--CCCCcceeeec----------------
Q 001122 286 SSPGGFYGYPNDSFS-SYPERAYLGMIDSSNHLVYAHSDSFNGQNMQIVPS--TKGSLKVLLLH---------------- 346 (1149)
Q Consensus 286 ~~~~~~~~~~~~~~~-~~~~~~~~~r~dSSn~~p~~~~~~~h~~g~q~Va~--q~~~~~~~Ll~---------------- 346 (1149)
..+.+|+.||.++|+ +| |+|.|+|||||+|+.+|+ +||||||+ |+.++.|+|.+
T Consensus 402 ~~~~~~~~~n~~~l~RvY---P~g~R~~SSN~~P~~~W~----~G~QmvAlN~Qt~d~~m~ln~g~F~~ng~~GYvlKP~ 474 (624)
T 1djx_A 402 ESGNGFVRHNVSCLSRIY---PAGWRTDSSNYSPVEMWN----GGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPA 474 (624)
T ss_dssp HHHHHHHHHHHHSCEEEE---CCTTCTTCCCCCSHHHHT----TTCCEEEECTTCCSHHHHHHHHHHHSGGGCSEEECCG
T ss_pred HhHHHHHHHhhhcceeec---cCCccCCCCCCCchHHhh----ccceeeeecccCCchHHhHHHHHhhcCCCCccEECCH
Confidence 446789999999999 99 999999999999999999 99999999 99888654432
Q ss_pred ----------------------eEEEEEEEEeeCCCCCCC--CCccccccccccCCCCCCCCcEEEEEECC----EEEee
Q 001122 347 ----------------------GNLDIWIYSAKNLPNMDM--FHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGR 398 (1149)
Q Consensus 347 ----------------------GtL~VtVieAr~L~~~D~--~g~~~~~~~~k~~~~~~~sDPYV~V~l~~----~~~~r 398 (1149)
++|+|+|++|++|+.+|. .+. +||||+|.+.+ ...+|
T Consensus 475 ~lr~~~~~f~p~~~~~~~~~~~~~L~V~Vi~A~~L~~~d~~~~~~---------------~DPYV~V~l~g~~~d~~~~k 539 (624)
T 1djx_A 475 FLRDPNTTFNSRALTQGPWWRPERLRVRIISGQQLPKVNKNKNSI---------------VDPKVIVEIHGVGRDTGSRQ 539 (624)
T ss_dssp GGGCTTCCCCTTSCCSSTTCCCEEEEEEEEEEESCCCCSSCSSSC---------------CCEEEEEEEESSGGGCEEEE
T ss_pred HHcCCCCCcCcccccccCCccceEEEEEEEEcCCCCcccccccCC---------------CCcEEEEEEecCCCCcceee
Confidence 379999999999998874 343 89999999955 23469
Q ss_pred eeeeeCC-CCCeeceEEEEEccCCC-cEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCCCCCCCCCCCc
Q 001122 399 TFVISNS-EDPVWQQHFYVPVAHSA-AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGAT 475 (1149)
Q Consensus 399 TkVi~nt-~NPvWNE~F~f~v~~~~-~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~~~~g~ 475 (1149)
|++++++ +||+|||+|.|.+..+. +.|+|+|||+|.. ++++||+++|||.+|..|. +|++|.+.+|++.. .+.
T Consensus 540 Tkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~~-~~~ 615 (624)
T 1djx_A 540 TAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQHP-SAT 615 (624)
T ss_dssp CCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEEE-EEE
T ss_pred cccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCCC-ceE
Confidence 9999997 99999999999998764 7899999999985 6899999999999999874 69999999998753 468
Q ss_pred EEEEEEee
Q 001122 476 LTLSIQYT 483 (1149)
Q Consensus 476 L~L~l~f~ 483 (1149)
|.|.++|.
T Consensus 616 L~v~i~~~ 623 (624)
T 1djx_A 616 LFVKISIQ 623 (624)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99988875
No 4
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.89 E-value=8.3e-24 Score=263.79 Aligned_cols=166 Identities=24% Similarity=0.327 Sum_probs=141.1
Q ss_pred CCCCCcccCCCCCcc-cCCcccCCCCcCCCCCCcccCCCCCCCCCcccccC--CCCCcceeeece---------------
Q 001122 286 SSPGGFYGYPNDSFS-SYPERAYLGMIDSSNHLVYAHSDSFNGQNMQIVPS--TKGSLKVLLLHG--------------- 347 (1149)
Q Consensus 286 ~~~~~~~~~~~~~~~-~~~~~~~~~r~dSSn~~p~~~~~~~h~~g~q~Va~--q~~~~~~~Ll~G--------------- 347 (1149)
..+.+|+.||.++|+ +| |+|.|+|||||+|+.+|+ +||||||+ |+.++.|+|.+|
T Consensus 555 ~~~~~~v~~n~~~l~RvY---P~g~RidSSNy~P~~~W~----~G~QmVALN~QT~d~~m~LN~g~F~~nG~cGYVLKP~ 627 (816)
T 3qr0_A 555 DNPEDFVDYNKKQITRIY---PKGTRVDSSNYVPQIYWN----AGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPE 627 (816)
T ss_dssp HCHHHHHHHTTTSCEEEE---CCTTCTTCCCCCTHHHHT----TTCSEECBCTTCCSHHHHHHHHHTTTTTTCSEEECCH
T ss_pred hhhHHHHHhhhcccceeC---CCccccCCCCCCchhhcc----cCceEEeecCcCCChhhhhhhhhhccCCceeeeecCh
Confidence 456789999999999 99 999999999999999999 99999999 999886655433
Q ss_pred -----------------------EEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCE------EEee
Q 001122 348 -----------------------NLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGA------VVGR 398 (1149)
Q Consensus 348 -----------------------tL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~------~~~r 398 (1149)
+|+|+|++|++|+.. . +||||+|.+.+. ...|
T Consensus 628 ~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~~----~---------------~DPYV~V~l~g~p~d~~~~k~k 688 (816)
T 3qr0_A 628 FMRKLDKRFDPFTESTVDGVVAGTIEIKIISAQFLSDK----Q---------------ISSYVEVEMYGLPTDTVRKKFK 688 (816)
T ss_dssp HHHCTTCCCCTTCCSCCTTSCCEEEEEEEEEEECCCSS----C---------------CCEEEEEEEESSGGGCEEEEEE
T ss_pred HhcCCCcccCCCCCCCcCCccceEEEEEEEEcccCCCC----C---------------CCCeEEEEEeCCCcccccceee
Confidence 699999999999742 2 799999999651 3349
Q ss_pred eeeeeC-CCCCeeceE-EEEE-ccCCC-cEEEEEEEEccCCCCcceeeEEEeceeeccCCceeeeeeecCCCCCCCCCCC
Q 001122 399 TFVISN-SEDPVWQQH-FYVP-VAHSA-AEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGA 474 (1149)
Q Consensus 399 TkVi~n-t~NPvWNE~-F~f~-v~~~~-~~L~~~V~D~D~~~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~~~~g 474 (1149)
|+++++ ++||+|||+ |.|. +..+. +.|+|+|+|++ ++|||+++|||++|..|. ++++|.+.+|++.. .+
T Consensus 689 Tkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d---ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~-~a 761 (816)
T 3qr0_A 689 TKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN---GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLG-LA 761 (816)
T ss_dssp CCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT---SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEE-EE
T ss_pred eEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC---CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCC-ce
Confidence 999986 699999998 9998 75553 78999999985 899999999999999885 67999999998764 35
Q ss_pred cEEEEEEeec
Q 001122 475 TLTLSIQYTP 484 (1149)
Q Consensus 475 ~L~L~l~f~p 484 (1149)
.|.|.+....
T Consensus 762 tLfv~i~~~~ 771 (816)
T 3qr0_A 762 SVFAHIVAKD 771 (816)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEe
Confidence 7888887654
No 5
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.89 E-value=3.6e-24 Score=268.25 Aligned_cols=166 Identities=24% Similarity=0.286 Sum_probs=141.2
Q ss_pred CCCCCcccCCCCCcc-cCCcccCCCCcCCCCCCcccCCCCCCCCCcccccC--CCCCcceeeece---------------
Q 001122 286 SSPGGFYGYPNDSFS-SYPERAYLGMIDSSNHLVYAHSDSFNGQNMQIVPS--TKGSLKVLLLHG--------------- 347 (1149)
Q Consensus 286 ~~~~~~~~~~~~~~~-~~~~~~~~~r~dSSn~~p~~~~~~~h~~g~q~Va~--q~~~~~~~Ll~G--------------- 347 (1149)
..+.+|+.||.++|+ +| |+|.|+|||||+|+.+|+ +||||||+ |+.++.|+|.+|
T Consensus 630 ~~~~~~~~~n~~~l~RvY---P~g~RidSSNy~P~~~W~----~G~QmVALN~QT~d~~m~lN~g~F~~nG~cGYVLKP~ 702 (885)
T 3ohm_B 630 KSPMEFVEYNKQQLSRIY---PKGTRVDSSNYMPQLFWN----VGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKPE 702 (885)
T ss_dssp HSHHHHHHHHHHSCEEEE---CCTTCTTCCCCCTHHHHT----TTCSEECBCTTCCSHHHHHHHHHHTTGGGCSEEECCG
T ss_pred hCHHHHHHHhhccceeec---cCccccCCCCCCchhhcc----cCceeeeecCCCCCcccchhhhhhccCCceeeeecCH
Confidence 456789999999999 99 999999999999999999 99999999 999987765544
Q ss_pred -----------------------EEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC-----EEEeee
Q 001122 348 -----------------------NLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG-----AVVGRT 399 (1149)
Q Consensus 348 -----------------------tL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~-----~~~~rT 399 (1149)
+|+|+|++|++|+.. . +||||+|.+.+ ....||
T Consensus 703 ~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~~----~---------------~DPYV~V~l~g~p~D~~~k~kT 763 (885)
T 3ohm_B 703 FMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSDR----K---------------VGIYVEVDMFGLPVDTRRKYRT 763 (885)
T ss_dssp GGTCTTCCCCTTCSSCCTTCCCEEEEEEEEEEESCCSS----C---------------CCEEEEEEEESSTTTCBCCCCC
T ss_pred HHcCCCcCcCCCcCcccCcccceEEEEEEEEeccCccc----C---------------CCcEEEEEEeCCCcccccceee
Confidence 699999999999732 2 79999999965 122599
Q ss_pred eeeeC-CCCCeece-EEEEE-ccCC-CcEEEEEEEEccCCCCcceeeEEEeceeeccCCceeeeeeecCCCCCCCCCCCc
Q 001122 400 FVISN-SEDPVWQQ-HFYVP-VAHS-AAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGAT 475 (1149)
Q Consensus 400 kVi~n-t~NPvWNE-~F~f~-v~~~-~~~L~~~V~D~D~~~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~~~~g~ 475 (1149)
+|+.+ ++||+||| +|.|. |..+ .+.|+|+|||+| ++|||+++|||..|..|. ++++|.+..|++.. .+.
T Consensus 764 kvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d---ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l~-~at 836 (885)
T 3ohm_B 764 RTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG---GKFVGHRILPVSAIRSGY---HYVCLRNEANQPLC-LPA 836 (885)
T ss_dssp CCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT---TEEEEEEEEETTTCCCEE---EEEEEECTTSCEEE-EEE
T ss_pred EEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC---ccEEeeEEEEHHHcCCCc---eEEEecCCCCCccC-ceE
Confidence 99976 69999999 69998 6544 378999999987 899999999999999885 57999999998753 458
Q ss_pred EEEEEEeec
Q 001122 476 LTLSIQYTP 484 (1149)
Q Consensus 476 L~L~l~f~p 484 (1149)
|.|.|.+..
T Consensus 837 Lfv~i~~~~ 845 (885)
T 3ohm_B 837 LLIYTEASD 845 (885)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 888888653
No 6
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.88 E-value=8.6e-24 Score=264.82 Aligned_cols=165 Identities=22% Similarity=0.269 Sum_probs=140.1
Q ss_pred CCCCCcccCCCCCcc-cCCcccCCCCcCCCCCCcccCCCCCCCCCcccccC--CCCCcceeeece---------------
Q 001122 286 SSPGGFYGYPNDSFS-SYPERAYLGMIDSSNHLVYAHSDSFNGQNMQIVPS--TKGSLKVLLLHG--------------- 347 (1149)
Q Consensus 286 ~~~~~~~~~~~~~~~-~~~~~~~~~r~dSSn~~p~~~~~~~h~~g~q~Va~--q~~~~~~~Ll~G--------------- 347 (1149)
..+.+|+.||.++|+ +| |+|.|+|||||+|+.+|+ +||||||+ |+.++.|+|.+|
T Consensus 583 ~~~~~~~~~n~~~l~RvY---P~g~R~~SSN~~P~~~W~----~G~QmVAlN~Qt~d~~m~ln~g~F~~nG~cGYVlKP~ 655 (799)
T 2zkm_X 583 KASVQFVDYNKRQMSRIY---PKGTRMDSSNYMPQMFWN----AGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHE 655 (799)
T ss_dssp HSHHHHHHHHHHSEEEEE---CCTTCTTCCCCCSHHHHH----TTCSEECBCTTCCSHHHHHHHHHTTTGGGCSEEECCG
T ss_pred HCHHHHHHHhhhcceeec---cCCCcCCCCCCCcHHHHh----ccceEeeeccccCchHHHHHHhhhhccCCCCceECCH
Confidence 456789999999999 99 999999999999999999 99999999 999987765543
Q ss_pred -----------------------EEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC-----EEEeee
Q 001122 348 -----------------------NLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG-----AVVGRT 399 (1149)
Q Consensus 348 -----------------------tL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~-----~~~~rT 399 (1149)
+|+|+|++|++|+. ++ +||||+|.+.+ .+..||
T Consensus 656 ~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visa~~L~~----~~---------------~DPYV~V~l~g~p~d~~~k~kT 716 (799)
T 2zkm_X 656 FMRRPDKQFNPFSVDRIDVVVATTLSITVISGQFLSE----RS---------------VRTYVEVELFGLPGDPKRRYRT 716 (799)
T ss_dssp GGTCTTSCCCTTSCCTTTTTTCEEEEEEEEEEESCCS----SC---------------CCEEEEEEEECCTTSCCCCEEC
T ss_pred HHhCCCccCCCcccccccceeeeeEEEEEEeccccCc----cC---------------CCcEEEEEEEecCCCcccceee
Confidence 69999999999984 22 79999999953 123489
Q ss_pred e-eeeC-CCCCeece-EEEE-EccCC-CcEEEEEEEEccCCCCcceeeEEEeceeeccCCceeeeeeecCCCCCCCCCCC
Q 001122 400 F-VISN-SEDPVWQQ-HFYV-PVAHS-AAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGA 474 (1149)
Q Consensus 400 k-Vi~n-t~NPvWNE-~F~f-~v~~~-~~~L~~~V~D~D~~~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~~~~g 474 (1149)
+ ++++ ++||+||| +|.| .+..+ .+.|+|+|+|+| +++||+++|||.+|..|. +|++|.+..|++.. .+
T Consensus 717 k~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d---~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~~-~~ 789 (799)
T 2zkm_X 717 KLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG---NKFLGHRIIPINALNSGY---HHLCLHSESNMPLT-MP 789 (799)
T ss_dssp CCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT---TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEEE-EE
T ss_pred cccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC---CCccceEeeehhhcCCCc---EEEeccCCCCCCCC-ce
Confidence 9 8865 79999999 6999 77555 368999999987 899999999999999874 68999998888664 46
Q ss_pred cEEEEEEee
Q 001122 475 TLTLSIQYT 483 (1149)
Q Consensus 475 ~L~L~l~f~ 483 (1149)
.|.|.+++.
T Consensus 790 ~Lfv~i~~~ 798 (799)
T 2zkm_X 790 ALFIFLEMK 798 (799)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 888888774
No 7
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.85 E-value=7.8e-21 Score=233.33 Aligned_cols=271 Identities=13% Similarity=0.117 Sum_probs=182.0
Q ss_pred HHHHHHHHHHHHhhc-----ceEEEEEeccceeeEEeCCCCchHHHHHHHHHHHhhcCCcEEEEEecCCCcccccccccc
Q 001122 545 KCWYDICNAISQAQR-----LIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMD 619 (1149)
Q Consensus 545 ~~f~al~eAI~~Ar~-----sI~I~~W~~~p~i~L~rd~~~~~g~~L~dlL~~kA~rGVkVrILvwD~~gs~~~~g~k~~ 619 (1149)
+.|+.+++.|++|++ +|+|+.|.+. + +..|.++|++||++||+|+||+ |..+....
T Consensus 347 ~sf~~v~~~I~~A~~dp~v~~I~it~Y~~~-------~-----d~~I~~AL~~AA~rGV~VrVLv-d~~a~~~~------ 407 (687)
T 1xdp_A 347 HTFEHVLELLRQASFDPSVLAIKINIYRVA-------K-----DSRIIDSMIHAAHNGKKVTVVV-ELQARFDE------ 407 (687)
T ss_dssp BCTHHHHHHHHHHHHCTTEEEEEEEESSCC-------T-----TCHHHHHHHHHHHTTCEEEEEE-CTTCSSTT------
T ss_pred hhhhhHHHHHHHHhhCCcceEEEEEeeeec-------C-----cHHHHHHHHHHHhcCCEEEEEE-CCCcccch------
Confidence 568999999999997 9999888542 2 2579999999999999999997 76542110
Q ss_pred cccccccHHHHHHhhcCCcEEEEccCcccccccccccccccccccccceeEEecCCCCCCCccEEEEEccccCCCCCCCC
Q 001122 620 GVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDN 699 (1149)
Q Consensus 620 g~~~t~~~~t~~~l~~~gV~v~l~p~~~~~~~~~~~~~~~~~~~~HHQKiVVVD~~~~~~~r~~vAFVGGiDL~dgRwDt 699 (1149)
.......+.|..+||+|..+.+ .++.|+|++|||++.++ .-+..|||||.|+....+
T Consensus 408 ----~~n~~~~~~L~~aGV~V~~~~~----------------~~k~H~Ki~VID~re~~-~i~~~a~iGS~N~d~rs~-- 464 (687)
T 1xdp_A 408 ----EANIHWAKRLTEAGVHVIFSAP----------------GLKIHAKLFLISRKENG-EVVRYAHIGTGNFNEKTA-- 464 (687)
T ss_dssp ----TTTTTTTHHHHHHTCEEEECCT----------------TCEECCEEEEEEEEETT-EEEEEEEEESSCSCTTGG--
T ss_pred ----hhHHHHHHHHHHCCCEEEEecC----------------CccccceEEEEEeccCC-eEEEEEEEeCCcCCcchh--
Confidence 0011345567788999976532 24689999999952111 001239999999877421
Q ss_pred CCCCcccccccccCCCCCCCcccCCCCCCCCCCeeeeeeEEcCH-HHHHHHHHHHHHHHhhcCCCCccccCcchhhhhhh
Q 001122 700 PHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGP-AAYDVLTNFEERWRKASKPHGIKKLKSGDDALLRI 778 (1149)
Q Consensus 700 ~~H~l~~~l~~~~~~Dy~np~~~~~~~~~pr~PWHDv~vrI~GP-aa~Dl~~~F~qrWn~at~~~~~~~l~~~~~~ll~~ 778 (1149)
.-|+|+++++.|+ +|.++...|...|.......
T Consensus 465 -------------------------------~~n~D~~l~i~~~~i~~~l~~~F~~~~~~s~~~~--------------- 498 (687)
T 1xdp_A 465 -------------------------------RLYTDYSLLTADARITNEVRRVFNFIENPYRPVT--------------- 498 (687)
T ss_dssp -------------------------------GTEEEEEEEECCHHHHHHHHHHHHHHHCTTSCCC---------------
T ss_pred -------------------------------hhcceEEEEEeCHHHHHHHHHHHHHHHhhccccc---------------
Confidence 3479999999987 69999999999997642210
Q ss_pred ccCCCccCCCCCCCcccCCCCCceEEEEEeccCCcccccCCCChhhhhccccccCccccchHHHHHHHHHHHHhhcc---
Q 001122 779 ERIPGIIGISDAPSVRENDAESWHVQVIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQH--- 855 (1149)
Q Consensus 779 ~~~p~~~~~~~~p~~~~~~~~~~~VQ~vlRS~~~~s~~~fP~~P~~~~~~~l~~g~~~~~e~sI~~ayl~aI~~Ar~--- 855 (1149)
...+ +. + |.. ....+...+...|..|++
T Consensus 499 -------------------~~~l----~~-s---------P~~----------------~~~~l~~~I~~ei~~A~~g~~ 529 (687)
T 1xdp_A 499 -------------------FDYL----MV-S---------PQN----------------SRRLLYEMVDREIANAQQGLP 529 (687)
T ss_dssp -------------------CSSC----EE-E---------TTS----------------HHHHHHHHHHHHHHHHHTTCC
T ss_pred -------------------hhhe----ee-C---------Cch----------------hhHHHHHHHHHHHHHHHcCCC
Confidence 0000 10 1 100 122455566667888887
Q ss_pred -EEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCC---CCCCCchhHHHHHHHHHhH
Q 001122 856 -FIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPE---GVPTGAATQRILFWQHKTM 931 (1149)
Q Consensus 856 -~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rgv~V~IVlP~~Pe---g~p~~~s~~~il~~~~rTm 931 (1149)
+|+|.+.| +++. .+..+|.+|. .+||+|.||+..... |.+. .++
T Consensus 530 ~~I~i~~~~-lpD~-----------------~ii~AL~~Aa--~rGV~VrLivrg~c~l~pgvp~-~sd----------- 577 (687)
T 1xdp_A 530 SGITLKLNN-LVDK-----------------GLVDRLYAAS--SSGVPVNLLVRGMCSLIPNLEG-ISD----------- 577 (687)
T ss_dssp CCEEEEESC-BCCH-----------------HHHHHHHHHH--HTTCCEEEEESSCBCBCTTCTT-TST-----------
T ss_pred CEEEEEeCC-CCCH-----------------HHHHHHHHHH--HCCCEEEEEEecccccCCCCCC-CCC-----------
Confidence 89999887 4442 4666676663 689999999964310 1110 000
Q ss_pred hhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCChhhhccccCcccceeeeEEEEE---eC
Q 001122 932 QMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIV---DD 1008 (1149)
Q Consensus 932 ~~~~~si~~~L~~~Gv~~~~~P~dYl~f~~L~~re~~~~~~~~~~~~~~~~n~~~~~~~~~r~~~iYVHSKlmIV---DD 1008 (1149)
.+.++. | + + ...=|+|++++ ||
T Consensus 578 --------------ni~V~s----~---~--------------------------------~--r~Leh~rI~~f~~~dd 602 (687)
T 1xdp_A 578 --------------NIRAIS----I---V--------------------------------D--RYLEHDRVYIFENGGD 602 (687)
T ss_dssp --------------TEEEEE----E---C--------------------------------S--SSEECCCEEEECGGGS
T ss_pred --------------CEEEEE----e---h--------------------------------h--HHhhCCeEEEEcCCCC
Confidence 011100 0 0 0 01238899988 88
Q ss_pred eEEEEcccCcccccCCCCCCcceEEEEeCcchh
Q 001122 1009 EYVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 1009 ~~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
++++||||||+.|||. ++.|+++.|+|+++.
T Consensus 603 ~~~~IGSAN~d~Rsl~--~n~Ev~~~I~d~~~~ 633 (687)
T 1xdp_A 603 KKVYLSSADWMTRNID--YRIEVATPLLDPRLK 633 (687)
T ss_dssp CEEEEESCCBSHHHHH--SEEEEEEECCSHHHH
T ss_pred CEEEEEcCccchhhhh--hheeeeEEecCHHHH
Confidence 9999999999999998 899999999998753
No 8
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.84 E-value=6.9e-21 Score=194.73 Aligned_cols=142 Identities=18% Similarity=0.300 Sum_probs=108.6
Q ss_pred CCcccccCCCCCcceeeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCC
Q 001122 328 QNMQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSED 407 (1149)
Q Consensus 328 ~g~q~Va~q~~~~~~~Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~nt~N 407 (1149)
+..-+|+.......+.+++|+|+|+|++|++|+++|..+++. ++++ ...++||||+|.+++++++||+++++|+|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~g~L~V~VieA~~L~~~D~~~~~~--~f~~---~~g~sDPYv~v~l~~~~~~kT~v~~ktln 84 (157)
T 2fk9_A 10 HSSGLVPRGSMSSGTMKFNGYLRVRIGEAVGLQPTRWSLRHS--LFKK---GHQLLDPYLTVSVDQVRVGQTSTKQKTNK 84 (157)
T ss_dssp CCSCCCC-------CCCEEEEEEEEEEEEECCCCCHHHHHTT--TSSS---SCCCCCEEEEEEETTEEEEECCCCSSCSS
T ss_pred ccCccccCCCCcchhccCccEEEEEEEEEECCCCcccccccc--cccc---CCCCCCeEEEEEECCEeeEEeeecCCCCC
Confidence 344456654344456788999999999999999888532110 1110 01238999999999988889999999999
Q ss_pred CeeceEEEEEccCCCcEEEEEEEEccCCC-CcceeeEEEeceeeccC----CceeeeeeecCCCCCCCCCCCcEEEEEEe
Q 001122 408 PVWQQHFYVPVAHSAAEVHFFVKDSDVVG-SELIGTVAIPVEQIYSG----GKVEGTYPVLNGSGKPCKPGATLTLSIQY 482 (1149)
Q Consensus 408 PvWNE~F~f~v~~~~~~L~~~V~D~D~~~-ddfIG~a~IpL~~L~~G----~~~~~W~~L~~~~gk~~~~~g~L~L~l~f 482 (1149)
|+|||+|.|.+.. ...|.|+|||+|..+ |++||++.|++++|..+ ...+.||+|.. .|+|+|+++|
T Consensus 85 P~WNE~F~f~v~~-~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------~G~i~l~l~~ 155 (157)
T 2fk9_A 85 PTYNEEFCANVTD-GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------EGKVFVVITL 155 (157)
T ss_dssp CEEEEEEEEEEEE-ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------SCEEEEEEEE
T ss_pred CccCcEEEEEcCC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------CcEEEEEEEE
Confidence 9999999999864 468999999999865 88999999999999865 67899999942 4689999998
Q ss_pred e
Q 001122 483 T 483 (1149)
Q Consensus 483 ~ 483 (1149)
.
T Consensus 156 ~ 156 (157)
T 2fk9_A 156 T 156 (157)
T ss_dssp C
T ss_pred E
Confidence 4
No 9
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=99.83 E-value=1.1e-19 Score=221.96 Aligned_cols=270 Identities=13% Similarity=0.167 Sum_probs=181.4
Q ss_pred HHHHHHHHHHHHhhc-----ceEEEEEeccceeeEEeCCCCchHHHHHHHHHHHhhcCCcEEEEEecCCCcccccccccc
Q 001122 545 KCWYDICNAISQAQR-----LIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMD 619 (1149)
Q Consensus 545 ~~f~al~eAI~~Ar~-----sI~I~~W~~~p~i~L~rd~~~~~g~~L~dlL~~kA~rGVkVrILvwD~~gs~~~~g~k~~ 619 (1149)
+.|+.++++|++|++ +|.++.|.+ .++ ..|.++|++||++||+|+||| | .+++...
T Consensus 352 ~sf~~vi~~I~~A~~DP~V~sIk~tlYr~-------~~d-----s~Iv~ALi~AA~rGv~V~vLv-e-l~arfde----- 412 (705)
T 2o8r_A 352 YTYDYVVRLLMEAAISPDVSEIRLTQYRV-------AEN-----SSIISALEAAAQSGKKVSVFV-E-LKARFDE----- 412 (705)
T ss_dssp BCSHHHHHHHHHHHTCTTEEEEEEEESCC-------CSC-----CHHHHHHHHHHHTTCEEEEEE-C-CCSCC-------
T ss_pred HhHHHHHHHHHHhccCCCceEEEEEEEEE-------cCC-----HHHHHHHHHHHHCCCEEEEEE-e-CCCCcch-----
Confidence 679999999999999 999998854 222 589999999999999999997 7 5543210
Q ss_pred cccccccHHHHHHhhcCCcEEEEccCcccccccccccccccccccccceeEEecCC--CCCCCccEEEEEccccCCCCCC
Q 001122 620 GVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDAD--AGYNRRKIIAFVGGLDLCDGRY 697 (1149)
Q Consensus 620 g~~~t~~~~t~~~l~~~gV~v~l~p~~~~~~~~~~~~~~~~~~~~HHQKiVVVD~~--~~~~~r~~vAFVGGiDL~dgRw 697 (1149)
..+..+.+.|+.+||+|...- ..+++|+|++|||++ .+++- +..+++|.-|+.+.
T Consensus 413 ----e~ni~wa~~Le~aGv~Vv~g~----------------~~lk~H~Ki~lIdrr~~~~g~~-~~y~~igtGN~n~~-- 469 (705)
T 2o8r_A 413 ----ENNLRLSERMRRSGIRIVYSM----------------PGLKVHAKTALILYHTPAGERP-QGIALLSTGNFNET-- 469 (705)
T ss_dssp ------CHHHHHHHHHHTCEEEECC----------------TTCCBCCCEEEEEECCCSSSCC-CEEEEEESSCSSCC--
T ss_pred ----hhhHHHHHHHHHCCCEEEEcc----------------CCCCceeEEEEEecccccCCce-eEEEeccccceeee--
Confidence 112356778889999987531 246799999999985 33221 12344432222221
Q ss_pred CCCCCCcccccccccCCCCCCCcccCCCCCCCCCCeeeeeeEEcCH-HHHHHHHHHHHHHHhhcCCCCccccCcchhhhh
Q 001122 698 DNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGP-AAYDVLTNFEERWRKASKPHGIKKLKSGDDALL 776 (1149)
Q Consensus 698 Dt~~H~l~~~l~~~~~~Dy~np~~~~~~~~~pr~PWHDv~vrI~GP-aa~Dl~~~F~qrWn~at~~~~~~~l~~~~~~ll 776 (1149)
...-|.|+++...+| ++.|+...|...|....
T Consensus 470 -------------------------------tariy~D~~l~t~~~~i~~dl~~vF~~~tg~~~---------------- 502 (705)
T 2o8r_A 470 -------------------------------TARIYSDTTLMTANTDIVHDVYRLFRILDGDPE---------------- 502 (705)
T ss_dssp -------------------------------CSSCEEEEEEEECCHHHHHHHHHHHHHHTTCCC----------------
T ss_pred -------------------------------EEEEEeeeeeeecChHHHHHHHHHHHHHhCCCC----------------
Confidence 112478888888886 67999999965553210
Q ss_pred hhccCCCccCCCCCCCcccCCCCCceEEEEEeccCCcccccCCCChhhhhccccccCccccchHHHHHHHHHHHHhhcc-
Q 001122 777 RIERIPGIIGISDAPSVRENDAESWHVQVIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQH- 855 (1149)
Q Consensus 777 ~~~~~p~~~~~~~~p~~~~~~~~~~~VQ~vlRS~~~~s~~~fP~~P~~~~~~~l~~g~~~~~e~sI~~ayl~aI~~Ar~- 855 (1149)
+..+ .|++. + |.. ....|.+.+..+|.+|++
T Consensus 503 ---------------------~~~~-~~l~~-s---------P~~----------------~~~~i~~~i~~eI~~Ak~G 534 (705)
T 2o8r_A 503 ---------------------PARF-SRLLV-A---------RYN----------------MGEAITNLIEREIENVKRG 534 (705)
T ss_dssp ---------------------CSCC-SSCEE-T---------TTT----------------HHHHHHHHHHHHHHHHHTT
T ss_pred ---------------------CCCc-eEEEE-C---------Cch----------------HHHHHHHHHHHHHHHHhcC
Confidence 0001 23121 2 111 134789999999999999
Q ss_pred ---EEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCC---CCCCCchhHHHHHHHHH
Q 001122 856 ---FIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPE---GVPTGAATQRILFWQHK 929 (1149)
Q Consensus 856 ---~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rgv~V~IVlP~~Pe---g~p~~~s~~~il~~~~r 929 (1149)
+|+|.++| +++. .+..+|.+|. .+||+|.||+-.... |.+ .+
T Consensus 535 ~~a~I~ik~n~-l~D~-----------------~ii~aL~~As--~~GV~V~LIVRGiC~L~Pgv~--~s---------- 582 (705)
T 2o8r_A 535 KRGYMLLKMNG-LQDK-----------------NVITQLYRAS--EAGVEIDLIVRGICCLVPDMP--QS---------- 582 (705)
T ss_dssp CCCEEEEEESC-BCCH-----------------HHHHHHHHHH--HTTCEEEEEESSCBCSCCSSG--GG----------
T ss_pred CCCEEEEEcCC-CCCH-----------------HHHHHHHHHH--HCCCeEEEEEccccccCCCCC--CC----------
Confidence 99999998 5542 5666777663 589999999933110 000 00
Q ss_pred hHhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCChhhhccccCcccceeeeEEEEE---
Q 001122 930 TMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIV--- 1006 (1149)
Q Consensus 930 Tm~~~~~si~~~L~~~Gv~~~~~P~dYl~f~~L~~re~~~~~~~~~~~~~~~~n~~~~~~~~~r~~~iYVHSKlmIV--- 1006 (1149)
..+.+.. ++ + ...=|+|++++
T Consensus 583 ---------------dni~V~S-------iv--------------------------------g--r~Leh~RIy~f~~g 606 (705)
T 2o8r_A 583 ---------------RNIRVTR-------LV--------------------------------D--MYLEHSRIWCFHNG 606 (705)
T ss_dssp ---------------TTEEEEE-------CC--------------------------------S--SSEECCCEEEECGG
T ss_pred ---------------CCeEEEe-------eH--------------------------------H--HHHhcCEEEEEECC
Confidence 0111110 00 0 01338899999
Q ss_pred eCeEEEEcccCcccccCCCCCCcceEEEEeCcchh
Q 001122 1007 DDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 1007 DD~~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
||+++.||||||+.|||. ++.|+++.|+|+++.
T Consensus 607 d~~~~~IGSAn~m~Rnl~--~r~Ev~~~i~d~~~~ 639 (705)
T 2o8r_A 607 GKEEVFISSADWMKRNLY--NRIETACPVLDPTLR 639 (705)
T ss_dssp GSCEEEEESCCBCHHHHH--TSBCEEEECCSHHHH
T ss_pred CCcEEEEeccccchhhhh--heeEEEEEEcCHHHH
Confidence 999999999999999998 999999999999753
No 10
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=5.5e-19 Score=175.59 Aligned_cols=124 Identities=27% Similarity=0.463 Sum_probs=107.8
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeeceEEEEEccCC---
Q 001122 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHS--- 421 (1149)
Q Consensus 345 l~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~nt~NPvWNE~F~f~v~~~--- 421 (1149)
..|+|.|+|++|++|+.+|. +. +||||+|.+.+++ .||++++++.||+|||+|.|.+...
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~---------------~dpyv~v~~~~~~-~kT~v~~~t~nP~wne~f~f~v~~~~~~ 67 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GK---------------PDPIVSVIFKDEK-KKTKKVDNELNPVWNEILEFDLRGIPLD 67 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SC---------------CCEEEEEECSSCE-EECCCCCSCSSCEEEEEEEEECSSCCCC
T ss_pred CCcEEEEEEEEeeCCCCCCC-CC---------------CCeEEEEEECCEe-EEeeeecCCCCCccCcEEEEEecccccC
Confidence 45789999999999999887 65 8999999999887 5999999999999999999998643
Q ss_pred -CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeee---ecCCCCCCCCCCCcEEEEEEeecccc
Q 001122 422 -AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYP---VLNGSGKPCKPGATLTLSIQYTPMER 487 (1149)
Q Consensus 422 -~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~---L~~~~gk~~~~~g~L~L~l~f~p~~~ 487 (1149)
...|.|+|||+|.. .+++||++.|++.+|..+...+.|++ |.+.+++. ..|+|+|+++|.|...
T Consensus 68 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~--~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 68 FSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQD--TGATIDLVIGYDPPSG 136 (140)
T ss_dssp TTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCE--EEEEEEEEEEECCCBS
T ss_pred CCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCC--CCCEEEEEEEEECCCC
Confidence 47899999999986 57899999999999998888889988 77666553 3479999999998543
No 11
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=7.2e-19 Score=173.57 Aligned_cols=122 Identities=22% Similarity=0.331 Sum_probs=107.1
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeeceEEEEEccCCCc
Q 001122 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAA 423 (1149)
Q Consensus 344 Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~nt~NPvWNE~F~f~v~~~~~ 423 (1149)
...|+|.|+|++|++|+.+|..|. +||||+|.+++.+. ||++++++.||+|||+|.|.+.....
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~-kT~~~~~t~nP~wne~f~f~~~~~~~ 73 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGK---------------SDPFCLLELGNDRL-QTHTVYKNLNPEWNKVFTFPIKDIHD 73 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSC---------------CCEEEEEEETTEEE-ECCCCSSCSSCCCCEEEEEEESCTTC
T ss_pred CCceEEEEEEEeeECCCCCCCCCC---------------cCeEEEEEECCEEE-EeeeecCCCCCccccEEEEEecCCCC
Confidence 345899999999999999998776 89999999999875 99999999999999999999987778
Q ss_pred EEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCCCCCCCCCCCcEEEEEEeec
Q 001122 424 EVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTP 484 (1149)
Q Consensus 424 ~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~p 484 (1149)
.|.|+|||+|.. .+++||++.|++.++..|. ..||+|.+.+++. ...|+|+|+++|..
T Consensus 74 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 74 VLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY 132 (133)
T ss_dssp EEEEEEEEEETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred EEEEEEEECCCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence 999999999996 5899999999999998764 5899998766543 34679999999863
No 12
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=1.2e-18 Score=176.02 Aligned_cols=123 Identities=20% Similarity=0.341 Sum_probs=99.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC-----EEEeeeeeeeCCCCCeeceEEEEEccC
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG-----AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~-----~~~~rTkVi~nt~NPvWNE~F~f~v~~ 420 (1149)
.|+|.|+|++|++|+.+|..|. +||||+|.+.+ ....||++++++.||+|||+|.|.+..
T Consensus 19 ~~~L~V~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 83 (153)
T 3b7y_A 19 SRIVRVRVIAGIGLAKKDILGA---------------SDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP 83 (153)
T ss_dssp CEEEEEEEEEEESCC----------------------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT
T ss_pred ccEEEEEEEEeeCCCCCCCCCC---------------CCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC
Confidence 3689999999999999988776 89999999974 245699999999999999999999987
Q ss_pred CCcEEEEEEEEccCC-CCcceeeEEEeceeeccCCce------eeeeeecCCCCCCCCCCCcEEEEEEeec
Q 001122 421 SAAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKV------EGTYPVLNGSGKPCKPGATLTLSIQYTP 484 (1149)
Q Consensus 421 ~~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~------~~W~~L~~~~gk~~~~~g~L~L~l~f~p 484 (1149)
....|+|+|||+|.. .+++||++.|++.+|..+... +.||+|....++. +..|+|+|+++|.|
T Consensus 84 ~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 84 QQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLP 153 (153)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEECC
T ss_pred CCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEeC
Confidence 778999999999986 588999999999999876432 5899997654432 45689999999986
No 13
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.78 E-value=5.8e-19 Score=175.19 Aligned_cols=130 Identities=17% Similarity=0.326 Sum_probs=104.7
Q ss_pred eeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeeceEEEEEccCCC
Q 001122 343 LLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSA 422 (1149)
Q Consensus 343 ~Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~nt~NPvWNE~F~f~v~~~~ 422 (1149)
.+++|+|+|+|++|++|+++|.++++. +++. .+...+||||+|.+++..+++|+++.++.||+|||+|.|.+...
T Consensus 2 ~~~~g~L~v~v~~a~~L~~~d~~~~~~---~g~~-~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~- 76 (136)
T 1gmi_A 2 VVFNGLLKIKICEAVSLKPTAWSLRDA---VGPR-PQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG- 76 (136)
T ss_dssp CCEEEEEEEEEEEEESCCCCHHHHCC----CCSS-CCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-
T ss_pred cccceEEEEEEEeCcCCCCcccccccc---cccc-cCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-
Confidence 467899999999999999888644210 1110 01123899999999998888999999999999999999998755
Q ss_pred cEEEEEEEEccCC-CCcceeeEEEeceeeccC--CceeeeeeecCCCCCCCCCCCcEEEEEEeecc
Q 001122 423 AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSG--GKVEGTYPVLNGSGKPCKPGATLTLSIQYTPM 485 (1149)
Q Consensus 423 ~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G--~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~p~ 485 (1149)
..|.|+|||+|.. .|++||++.|++.++..+ ...+.|++|. +.|+|+|+++|.+.
T Consensus 77 ~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 77 RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE--------PEGKVYVIIDLSGS 134 (136)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------SSCEEEEEEEEEEE
T ss_pred CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC--------CCeEEEEEEEEEec
Confidence 7999999999985 588999999999999864 3458999984 13699999999764
No 14
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.78 E-value=3.9e-19 Score=175.81 Aligned_cols=125 Identities=23% Similarity=0.423 Sum_probs=109.0
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeee-CCCCCeeceEEEEEccCCC
Q 001122 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVIS-NSEDPVWQQHFYVPVAHSA 422 (1149)
Q Consensus 344 Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~-nt~NPvWNE~F~f~v~~~~ 422 (1149)
...|+|.|+|++|++|+.+|..+. +||||+|.+.+.+. ||++++ ++.||+|||+|.|.+....
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~-kT~~~~~~~~nP~Wne~f~f~v~~~~ 70 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNN---------------MDPYVQLTCRTQDQ-KSNVAEGMGTTPEWNETFIFTVSEGT 70 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCS---------------SCCCEEEESSSCEE-ECCCCTTCCSSCEEEEEEEEEEESSC
T ss_pred CCcEEEEEEEEeccCCCCcccCCC---------------cCceEEEEECCccc-eeEeccCCCCCCccCcEEEEEECCCC
Confidence 356899999999999999998776 89999999999875 999998 8999999999999998777
Q ss_pred cEEEEEEEEccCC-CCcceeeEEEeceee-ccCCceeeeeeecCCCCCCCCCCCcEEEEEEeeccccc
Q 001122 423 AEVHFFVKDSDVV-GSELIGTVAIPVEQI-YSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERL 488 (1149)
Q Consensus 423 ~~L~~~V~D~D~~-~ddfIG~a~IpL~~L-~~G~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~p~~~d 488 (1149)
..|+|+|||+|.. +|++||++.|+|.++ ..+...+.||+|. .+++ ..|+|+|+++|.|...+
T Consensus 71 ~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~---~~G~i~l~l~~~p~~~~ 134 (136)
T 1wfj_A 71 TELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEE---YKGEIWVALSFKPSGPS 134 (136)
T ss_dssp CEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTE---EEEEEEEEEEEEECCSC
T ss_pred CEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCc---cCEEEEEEEEEEeCCCC
Confidence 8999999999985 589999999999999 4566678999997 3333 34799999999997664
No 15
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.77 E-value=4e-18 Score=171.10 Aligned_cols=121 Identities=25% Similarity=0.381 Sum_probs=104.5
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeeceEEEEEccCCCc
Q 001122 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAA 423 (1149)
Q Consensus 344 Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~nt~NPvWNE~F~f~v~~~~~ 423 (1149)
+..|.|.|+|++|++|+.+|..|. +||||+|.+++.+. ||++++++.||+|||+|.|.+.....
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~-kT~~~~~t~nP~Wne~f~f~v~~~~~ 77 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGS---------------SDPYVTVQVGKTKK-RTKTIYGNLNPVWEENFHFECHNSSD 77 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEETTEEE-ECCCCCSCSSCEEEEEEEEEECSTTC
T ss_pred ccccEEEEEEEeeeCCCCCCCCCC---------------cCeEEEEEECCEEE-ECCccCCCCCCCcccEEEEEecCCCC
Confidence 346899999999999999998776 89999999988775 99999999999999999999987778
Q ss_pred EEEEEEEEccCC------------CCcceeeEEEeceeeccCCceeeeeeecCCCCCCCCCCCcEEEEEEee
Q 001122 424 EVHFFVKDSDVV------------GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYT 483 (1149)
Q Consensus 424 ~L~~~V~D~D~~------------~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~ 483 (1149)
.|.|+|||+|.. ++++||++.|++.++. ...+.||+|....++. ...|+|+|+|+|.
T Consensus 78 ~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 78 RIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp EEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred EEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 999999999974 6899999999999994 4567999997554433 3457999999985
No 16
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=2.2e-18 Score=168.04 Aligned_cols=118 Identities=21% Similarity=0.352 Sum_probs=99.2
Q ss_pred ceEEEEEEEEeeCCCCC---CCCCccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeeeCCCCCeeceEEEEEccC
Q 001122 346 HGNLDIWIYSAKNLPNM---DMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~---D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~--~~~~rTkVi~nt~NPvWNE~F~f~v~~ 420 (1149)
.|.|.|+|++|++|+.+ |..|. +||||+|.+.+ ...+||++++++.||+|||+|.|.+..
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~---------------~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 66 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDT---------------PDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDP 66 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCC---------------CCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECT
T ss_pred CcEEEEEEEeeeCCCCCCccccCCC---------------CCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecC
Confidence 47899999999999975 55555 89999999986 244699999999999999999999954
Q ss_pred C-CcEEEEEEEEccCCCCcceeeEEEeceeeccCCceeeeeeecCCCCCCCCCCCcEEEEEEeec
Q 001122 421 S-AAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTP 484 (1149)
Q Consensus 421 ~-~~~L~~~V~D~D~~~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~p 484 (1149)
. ...|.|+|||+|..++++||++.|+|.+|..|...+.|++|.. . ..|.|+|+|+..|
T Consensus 67 ~~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~-~-----~~g~i~~~le~~~ 125 (126)
T 1rlw_A 67 NQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ-V-----TEMVLEMSLEVAS 125 (126)
T ss_dssp TSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEETT-T-----EEEEEEEEEECCC
T ss_pred CCCCEEEEEEEECCCCCCceeEEEEEEHHHccCCCcEEEEEEcCC-C-----ceEEEEEEEEeCC
Confidence 3 5789999999999889999999999999999988999999953 1 2357777776543
No 17
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.74 E-value=1.1e-17 Score=173.30 Aligned_cols=124 Identities=21% Similarity=0.352 Sum_probs=98.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC-----EEEeeeeeeeCCCCCeeceEEEEEccC
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG-----AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~-----~~~~rTkVi~nt~NPvWNE~F~f~v~~ 420 (1149)
.|+|.|+|++|++|+.+|..|+ +||||+|.+.+ ....||++++++.||+|||+|.|.+..
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~---------------~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~ 71 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGA---------------SDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP 71 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCC---------------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT
T ss_pred cEEEEEEEEEeeCCCCcCCCCC---------------cCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC
Confidence 4789999999999999998776 89999999975 134699999999999999999999987
Q ss_pred CCcEEEEEEEEccCC-CCcceeeEEEeceeeccCCce-e-----eeeeecCCCCCCCCCCCcEEEEEEeecc
Q 001122 421 SAAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKV-E-----GTYPVLNGSGKPCKPGATLTLSIQYTPM 485 (1149)
Q Consensus 421 ~~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~-~-----~W~~L~~~~gk~~~~~g~L~L~l~f~p~ 485 (1149)
....|.|+|||+|.. .++|||++.|+|.+|..+... + .||+|....++. +..|+|+|+|+|.|.
T Consensus 72 ~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 72 QRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLPK 142 (176)
T ss_dssp TTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEECC-
T ss_pred CCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEEEeC
Confidence 778999999999985 589999999999999876433 2 799997654432 345899999999997
No 18
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.72 E-value=2.9e-17 Score=161.86 Aligned_cols=119 Identities=21% Similarity=0.322 Sum_probs=98.4
Q ss_pred EEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC-EEEeeeeeeeCCCCCeeceEEEEEccCCCcEEE
Q 001122 348 NLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG-AVVGRTFVISNSEDPVWQQHFYVPVAHSAAEVH 426 (1149)
Q Consensus 348 tL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~-~~~~rTkVi~nt~NPvWNE~F~f~v~~~~~~L~ 426 (1149)
.|+|+|++|++|+.+|..|. +||||+|.+++ ....||+++++++||+|||+|.|.+.... .|.
T Consensus 6 ~L~V~v~~a~~L~~~d~~g~---------------sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l~ 69 (132)
T 3pyc_A 6 KIRLTVLCAKNLAKKDFFRL---------------PDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SIT 69 (132)
T ss_dssp EEEEEEEEEESCCCCSTTCC---------------CCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CEE
T ss_pred EEEEEEEEeECCCCCCCCCC---------------cCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EEE
Confidence 69999999999999998886 89999999975 34469999999999999999999997654 499
Q ss_pred EEEEEccCCC----CcceeeEEEeceeec-cCCceeeeeeecCCCC-CCCCCCCcEEEEEEe
Q 001122 427 FFVKDSDVVG----SELIGTVAIPVEQIY-SGGKVEGTYPVLNGSG-KPCKPGATLTLSIQY 482 (1149)
Q Consensus 427 ~~V~D~D~~~----ddfIG~a~IpL~~L~-~G~~~~~W~~L~~~~g-k~~~~~g~L~L~l~f 482 (1149)
|+|||+|..+ |+|||++.|++.+|. .+.....|++|....+ +..+..|+|+|+|++
T Consensus 70 ~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 70 ISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp EEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred EEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 9999999865 789999999999883 3344458899976532 223456899999875
No 19
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=2.8e-17 Score=170.62 Aligned_cols=127 Identities=24% Similarity=0.349 Sum_probs=102.1
Q ss_pred eeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeeceEEEEEccCCC
Q 001122 343 LLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSA 422 (1149)
Q Consensus 343 ~Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~nt~NPvWNE~F~f~v~~~~ 422 (1149)
....++|.|+|++|++|++.+..++ +||||+|.+++.+ .||+++++++||+|||+|.|.+. ..
T Consensus 32 ~~~~~~L~V~V~~A~~L~~~~~~~~---------------sDPYv~v~~~~~~-~kT~v~~~tlnP~Wne~f~f~v~-~~ 94 (173)
T 2nq3_A 32 LTMKSQLQITVISAKLKENKKNWFG---------------PSPYVEVTVDGQS-KKTEKCNNTNSPKWKQPLTVIVT-PV 94 (173)
T ss_dssp CSCCEEEEEEEEEEEECCCC--CCC---------------CCEEEEEEETTEE-EECCCCSSCSSCEEEEEEEEEEC-TT
T ss_pred cCCceEEEEEEEEeECCCCcccCCC---------------CCeEEEEEECCEE-eEccccCCCCCCeECCEEEEEeC-CC
Confidence 3456789999999999994433343 7999999999954 59999999999999999999986 47
Q ss_pred cEEEEEEEEccCC-CCcceeeEEEeceeeccCC-----ceeeeeeecCCCCCCCCCCCcEEEEEEeecccc
Q 001122 423 AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGG-----KVEGTYPVLNGSGKPCKPGATLTLSIQYTPMER 487 (1149)
Q Consensus 423 ~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~-----~~~~W~~L~~~~gk~~~~~g~L~L~l~f~p~~~ 487 (1149)
..|.|+|||+|.. .++|||++.|+|.+|..+. ..+.|++|...+++ ....|+|+|.+.+.+...
T Consensus 95 ~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~-~~~~G~L~v~l~~l~~~~ 164 (173)
T 2nq3_A 95 SKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEP-TETIGDLSICLDGLQLES 164 (173)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCT-TSEEEEEEEEEESEECC-
T ss_pred CEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCC-CcccEEEEEEEeeeecch
Confidence 8999999999986 5789999999999997532 23679999866432 234579999999987643
No 20
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.66 E-value=3.6e-16 Score=154.99 Aligned_cols=105 Identities=14% Similarity=0.268 Sum_probs=89.6
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeeeCCCCCeeceEEEEE-c
Q 001122 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA----GAVVGRTFVISNSEDPVWQQHFYVP-V 418 (1149)
Q Consensus 344 Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~----~~~~~rTkVi~nt~NPvWNE~F~f~-v 418 (1149)
...|.|.|+|++|++|+. +..+. +||||+|.+. +....||++++++.||+|||+|.|. +
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~---------------~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v 80 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGAD---------------PNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGY 80 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCC---------------CCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESC
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCC---------------CCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCc
Confidence 356789999999999995 66665 8999999992 2334599999999999999999999 6
Q ss_pred cC---CCcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecC
Q 001122 419 AH---SAAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLN 464 (1149)
Q Consensus 419 ~~---~~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~ 464 (1149)
.. ....|.|+|||+|.. .+++||++.|+|.++..+...+.||+|.+
T Consensus 81 ~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 81 SKETLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp CHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred CHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 53 247899999999986 48899999999999998888899999964
No 21
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=3e-16 Score=158.51 Aligned_cols=105 Identities=26% Similarity=0.320 Sum_probs=91.7
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeeeCCCCCeeceEEEEEccCC-
Q 001122 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA--GAVVGRTFVISNSEDPVWQQHFYVPVAHS- 421 (1149)
Q Consensus 345 l~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~--~~~~~rTkVi~nt~NPvWNE~F~f~v~~~- 421 (1149)
..+.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+...
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 104 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGT---------------SDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE 104 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHH
T ss_pred CCCEEEEEEEEeECCCCccCCCC---------------cCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHH
Confidence 34789999999999999988776 8999999994 23345999999999999999999998643
Q ss_pred --CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecC
Q 001122 422 --AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLN 464 (1149)
Q Consensus 422 --~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~ 464 (1149)
...|.|+|||+|.. .+++||++.|++.++..|...+.||+|.+
T Consensus 105 l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 105 LGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp HTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred cCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 47899999999985 58899999999999998888899999964
No 22
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=4.6e-16 Score=154.92 Aligned_cols=105 Identities=23% Similarity=0.251 Sum_probs=90.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeeeCCCCCeeceEEEEEccC---
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA--GAVVGRTFVISNSEDPVWQQHFYVPVAH--- 420 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~--~~~~~rTkVi~nt~NPvWNE~F~f~v~~--- 420 (1149)
.+.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+..
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~ 89 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGT---------------SDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEK 89 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSC---------------CCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHH
T ss_pred CCEEEEEEEEeECCCCCCCCCC---------------CCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHH
Confidence 4679999999999999988776 8999999994 2334599999999999999999998532
Q ss_pred -CCcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCC
Q 001122 421 -SAAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 421 -~~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~ 465 (1149)
....|.|+|||+|.. .+++||++.|++.+|..+...+.||+|...
T Consensus 90 ~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 90 VVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp HTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred cccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 247899999999985 589999999999999988888999999754
No 23
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.65 E-value=2.6e-16 Score=157.00 Aligned_cols=104 Identities=26% Similarity=0.320 Sum_probs=91.0
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeeeCCCCCeeceEEEEEccCC-
Q 001122 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA--GAVVGRTFVISNSEDPVWQQHFYVPVAHS- 421 (1149)
Q Consensus 345 l~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~--~~~~~rTkVi~nt~NPvWNE~F~f~v~~~- 421 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+...
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 96 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGT---------------SDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE 96 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBC---------------CCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHH
T ss_pred CCCEEEEEEEEecCCCCCCCCCC---------------cCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhh
Confidence 45789999999999998887776 8999999993 33346999999999999999999998643
Q ss_pred --CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeec
Q 001122 422 --AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVL 463 (1149)
Q Consensus 422 --~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~ 463 (1149)
...|+|+|||+|.. .+++||++.|+|.++..+...+.|++|.
T Consensus 97 l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 97 LGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp HTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred cCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 37899999999985 5899999999999999988889999995
No 24
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=4.4e-16 Score=156.66 Aligned_cols=105 Identities=24% Similarity=0.366 Sum_probs=91.5
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCeeceEEEEEccC
Q 001122 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 345 l~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~----~~~~rTkVi~nt~NPvWNE~F~f~v~~ 420 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+.. ....||++++++.||+|||+|.|.+..
T Consensus 29 ~~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (149)
T 1a25_A 29 DREVLIVVVRDAKNLVPMDPNGL---------------SDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKE 93 (149)
T ss_dssp SSSEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCS
T ss_pred cCCEEEEEEEEeeCCCCCCCCCC---------------cCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEecc
Confidence 46789999999999999988776 89999999963 334599999999999999999999875
Q ss_pred C--CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCC
Q 001122 421 S--AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 421 ~--~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~ 465 (1149)
. ...|.|+|||+|.. .+++||++.|++.+|..+ ..+.||+|.+.
T Consensus 94 ~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 94 SDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred ccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 4 36899999999986 588999999999999876 47899999753
No 25
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=1.3e-16 Score=158.70 Aligned_cols=107 Identities=25% Similarity=0.308 Sum_probs=92.5
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCE-------------EEeeeeeeeCCCCCee
Q 001122 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGA-------------VVGRTFVISNSEDPVW 410 (1149)
Q Consensus 344 Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~-------------~~~rTkVi~nt~NPvW 410 (1149)
...|.|.|+|++|++|+.+|..|. +||||+|.+.+. ...||+++++++||+|
T Consensus 15 y~~~~L~V~v~~a~~L~~~d~~g~---------------~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~w 79 (142)
T 1rh8_A 15 YDLGNLIIHILQARNLVPRDNNGY---------------SDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEW 79 (142)
T ss_dssp EETTEEEEEEEEEESCCCCSSSSC---------------SCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEE
T ss_pred EcCCEEEEEEEEecCCCCCCCCCC---------------CCceEEEEEecCCCcccccccccccceeeccccCCCCCCCC
Confidence 447899999999999999998776 899999999863 2359999999999999
Q ss_pred ceEEEEE-ccC---CCcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCC
Q 001122 411 QQHFYVP-VAH---SAAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 411 NE~F~f~-v~~---~~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~ 465 (1149)
||+|.|. +.. ....|.|+|||+|.. .+++||++.|+|.++..+...+.||+|...
T Consensus 80 ne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 80 NQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp EEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred CCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 9999997 532 246899999999986 588999999999999887778899999754
No 26
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.64 E-value=2.5e-16 Score=159.40 Aligned_cols=106 Identities=24% Similarity=0.381 Sum_probs=89.5
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCeeceEEEEEc--
Q 001122 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVPV-- 418 (1149)
Q Consensus 345 l~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~----~~~~rTkVi~nt~NPvWNE~F~f~v-- 418 (1149)
..|.|.|+|++|++|+.+| .+. +||||+|.+.. ....||++++++.||+|||+|.|.+
T Consensus 25 ~~~~L~V~v~~a~~L~~~d-~g~---------------~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 88 (153)
T 3fbk_A 25 QDRVLLLHIIEGKGLISKQ-PGT---------------CDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQE 88 (153)
T ss_dssp SSSEEEEEEEEEESCCCCS-SSC---------------CCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCG
T ss_pred CCCEEEEEEEEeeCCCCCC-CCC---------------CCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEeccc
Confidence 4578999999999999888 465 89999999932 2335999999999999999999998
Q ss_pred cCCCcEEEEEEEEccCC-C-CcceeeEEEeceeecc-CCceeeeeeecCCC
Q 001122 419 AHSAAEVHFFVKDSDVV-G-SELIGTVAIPVEQIYS-GGKVEGTYPVLNGS 466 (1149)
Q Consensus 419 ~~~~~~L~~~V~D~D~~-~-ddfIG~a~IpL~~L~~-G~~~~~W~~L~~~~ 466 (1149)
......|.|+|||+|.. + ++|||++.|+|.+|.. +...+.||+|.+..
T Consensus 89 ~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 89 EDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp GGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred HHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 44446799999999985 3 8999999999999984 77889999998654
No 27
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=3e-16 Score=155.68 Aligned_cols=106 Identities=24% Similarity=0.318 Sum_probs=89.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeeeCCCCCeeceEEEEEccC-
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA----GAVVGRTFVISNSEDPVWQQHFYVPVAH- 420 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~----~~~~~rTkVi~nt~NPvWNE~F~f~v~~- 420 (1149)
.+.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+..
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 84 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRP---------------RNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 84 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCC---------------CCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCT
T ss_pred CCEEEEEEEEccCCCCcCCCCC---------------CCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCH
Confidence 3689999999999999998776 8999999993 2334599999999999999999999532
Q ss_pred C---CcEEEEEEEEccCCC---CcceeeEEEeceeeccCCceeeeeeecCCCC
Q 001122 421 S---AAEVHFFVKDSDVVG---SELIGTVAIPVEQIYSGGKVEGTYPVLNGSG 467 (1149)
Q Consensus 421 ~---~~~L~~~V~D~D~~~---ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~g 467 (1149)
. ...|.|+|||+|..+ +++||++.|+|.++.... .+.||+|...+.
T Consensus 85 ~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~ 136 (141)
T 1v27_A 85 REFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDS 136 (141)
T ss_dssp TGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSS
T ss_pred HHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECccccc
Confidence 2 378999999999865 899999999999987644 789999986543
No 28
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=4.2e-16 Score=152.41 Aligned_cols=101 Identities=25% Similarity=0.339 Sum_probs=83.7
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeeeCCCCCeeceEEEEEccC-
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA----GAVVGRTFVISNSEDPVWQQHFYVPVAH- 420 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~----~~~~~rTkVi~nt~NPvWNE~F~f~v~~- 420 (1149)
.|.|.|+|++|++|+.+|..|. +||||+|.+. +....||++++++.||+|||+|.|.+..
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~---------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 81 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRP---------------RNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 81 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCC---------------BCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCG
T ss_pred CCEEEEEEEEeeCCCCCCCCCC---------------CCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCH
Confidence 4689999999999999988776 8999999992 2334599999999999999999999532
Q ss_pred ---CCcEEEEEEEEccCCC---CcceeeEEEeceeeccCCceeeeeee
Q 001122 421 ---SAAEVHFFVKDSDVVG---SELIGTVAIPVEQIYSGGKVEGTYPV 462 (1149)
Q Consensus 421 ---~~~~L~~~V~D~D~~~---ddfIG~a~IpL~~L~~G~~~~~W~~L 462 (1149)
....|.|+|||+|..+ +++||++.|++.++.... .+.||+|
T Consensus 82 ~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 82 REFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp GGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred HHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 2368999999999865 899999999999988644 7899998
No 29
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.64 E-value=2.8e-16 Score=157.91 Aligned_cols=108 Identities=15% Similarity=0.252 Sum_probs=90.5
Q ss_pred ceEEEEEEEEeeCCCCCC-CCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCeeceEEEEEccC
Q 001122 346 HGNLDIWIYSAKNLPNMD-MFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D-~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~----~~~~rTkVi~nt~NPvWNE~F~f~v~~ 420 (1149)
.|.|.|+|++|++|+.+| ..+. +||||+|.+.. ....||++++++.||+|||+|.|.+..
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~---------------~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 86 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKR---------------SNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPE 86 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTB---------------CCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCS
T ss_pred CCEEEEEEEEecCCCCcccCCCC---------------CCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeCh
Confidence 478999999999999887 4565 89999999963 124599999999999999999999865
Q ss_pred C---CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCCCCC
Q 001122 421 S---AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGK 468 (1149)
Q Consensus 421 ~---~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk 468 (1149)
. ...|.|+|||+|.. .+++||++.|+|.++..+...+.||+|..+.+.
T Consensus 87 ~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~ 138 (148)
T 3fdw_A 87 SLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISA 138 (148)
T ss_dssp TTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC---
T ss_pred hHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCcccc
Confidence 4 35799999999985 488999999999999987778899999765444
No 30
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.64 E-value=3.4e-16 Score=161.69 Aligned_cols=106 Identities=20% Similarity=0.285 Sum_probs=92.2
Q ss_pred eceEEEEEEEEeeCCCCCCC-CCccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeeeCCCCCeeceEEEEEcc
Q 001122 345 LHGNLDIWIYSAKNLPNMDM-FHKTLGGMFNSQMNTKITSDPYVTIAVAG--A--VVGRTFVISNSEDPVWQQHFYVPVA 419 (1149)
Q Consensus 345 l~GtL~VtVieAr~L~~~D~-~g~~~~~~~~k~~~~~~~sDPYV~V~l~~--~--~~~rTkVi~nt~NPvWNE~F~f~v~ 419 (1149)
..|.|.|+|++|++|+.+|. .+. +||||+|.+.. . ...||+++++++||+|||+|.|.+.
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~---------------~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 92 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKST---------------PAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDES 92 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CC---------------CEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCC---------------CCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEec
Confidence 57899999999999999985 565 89999999853 2 3569999999999999999999997
Q ss_pred CCCcEEEEEEE-EccCC-CCcceeeEEEeceeeccCCceeeeeeecCC
Q 001122 420 HSAAEVHFFVK-DSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 420 ~~~~~L~~~V~-D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~ 465 (1149)
.....|.|+|| |+|.. .+++||++.|+|.++..+...+.||+|...
T Consensus 93 ~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 93 PQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp CTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 66789999999 99985 578999999999999988888999999754
No 31
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.64 E-value=2.1e-16 Score=161.06 Aligned_cols=103 Identities=20% Similarity=0.272 Sum_probs=89.5
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC---E--EEeeeeeeeCCCCCeeceEEEEEccC
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG---A--VVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~---~--~~~rTkVi~nt~NPvWNE~F~f~v~~ 420 (1149)
.|.|.|+|++|++|+.+|..|. +||||+|.+.. . ...||+++++|+||+|||+|.|.+..
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~---------------sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQD---------------QKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCC---------------SEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred CCEEEEEEEEccCcCCcccCCC---------------CCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 4689999999999999998776 89999999964 2 24599999999999999999999864
Q ss_pred C---CcEEEEEEEEccCC-CCcceeeEEEeceeec-cCCceeeeeeec
Q 001122 421 S---AAEVHFFVKDSDVV-GSELIGTVAIPVEQIY-SGGKVEGTYPVL 463 (1149)
Q Consensus 421 ~---~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~-~G~~~~~W~~L~ 463 (1149)
. ...|.|+|||+|.. ++++||++.|++.++. .+...+.||+|+
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 3 36899999999985 5889999999999996 467788999995
No 32
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.63 E-value=9.5e-16 Score=162.16 Aligned_cols=132 Identities=17% Similarity=0.202 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHhhcceEEEEEeccceeeEEeCCCCchHHHHHHHHHHHhhcCCcEEEEEecCCCccccccccccccccc
Q 001122 545 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQT 624 (1149)
Q Consensus 545 ~~f~al~eAI~~Ar~sI~I~~W~~~p~i~L~rd~~~~~g~~L~dlL~~kA~rGVkVrILvwD~~gs~~~~g~k~~g~~~t 624 (1149)
++|.+|+++|++||++|+|+.|.|. + ..|.++|++||+|||+||||+ |......
T Consensus 46 ~~~~~ll~~I~~A~~sI~i~~y~~~-------~------~~i~~aL~~aa~rGV~Vrii~-D~~~~~~------------ 99 (196)
T 4ggj_A 46 SSLSRLLRALLAARSSLELCLFAFS-------S------PQLGRAVQLLHQRGVRVRVIT-DCDYMAL------------ 99 (196)
T ss_dssp CHHHHHHHHHHTCSSEEEEEESCBC-------C------HHHHHHHHHHHHTTCEEEEEE-SSCCC--------------
T ss_pred HHHHHHHHHHHHhheEEEEEEEEeC-------C------HHHHHHHHHHHHcCCcEEEEE-ecccccc------------
Confidence 5799999999999999999998652 2 579999999999999999997 7532110
Q ss_pred ccHHHHHHhhcCCcEEEEccCcccccccccccccccccccccceeEEecCCCCCCCccEEEEEccccCCCCCCCCCCCCc
Q 001122 625 HDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPL 704 (1149)
Q Consensus 625 ~~~~t~~~l~~~gV~v~l~p~~~~~~~~~~~~~~~~~~~~HHQKiVVVD~~~~~~~r~~vAFVGGiDL~dgRwDt~~H~l 704 (1149)
.......|...||+|..... ....|+|++|||++ ++|+||.|++...+.
T Consensus 100 -~~~~~~~l~~~gi~v~~~~~----------------~~~~H~K~~viD~~--------~~~~GS~N~t~~~~~------ 148 (196)
T 4ggj_A 100 -NGSQIGLLRKAGIQVRHDQD----------------LGYMHHKFAIVDKK--------VLITGSLNWTTQAIQ------ 148 (196)
T ss_dssp --CCHHHHHHHTTCEEEECCS----------------SSCCCCEEEEETTT--------EEEEESCCBCHHHHH------
T ss_pred -cHHHHHHHHhcCCCcccccc----------------cccccCcEEEEcce--------EEEecCccCChhhhc------
Confidence 01134567788999876432 13479999999996 999999998774321
Q ss_pred ccccccccCCCCCCCcccCCCCCCCCCCeeeeeeEEc-CHHHHHHHHHHHHHHHhhc
Q 001122 705 FRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKID-GPAAYDVLTNFEERWRKAS 760 (1149)
Q Consensus 705 ~~~l~~~~~~Dy~np~~~~~~~~~pr~PWHDv~vrI~-GPaa~Dl~~~F~qrWn~at 760 (1149)
..| +..+.+. +++|..+.+.|.+.|+...
T Consensus 149 --------------------------~n~-E~~~~i~~~~~~~~~~~~F~~~W~~~~ 178 (196)
T 4ggj_A 149 --------------------------NNR-ENVLIMEDTEYVRLFLEEFERIWEEFD 178 (196)
T ss_dssp --------------------------HCC-EEEEEECCHHHHHHHHHHHHHHHHHTC
T ss_pred --------------------------ccc-eeEEEEECHHHHHHHHHHHHHHHHhCC
Confidence 112 3444554 5579999999999999764
No 33
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=1.6e-15 Score=168.08 Aligned_cols=128 Identities=23% Similarity=0.311 Sum_probs=107.7
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeeeCCCCCeeceEEEEEccCC-
Q 001122 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--AVVGRTFVISNSEDPVWQQHFYVPVAHS- 421 (1149)
Q Consensus 345 l~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~--~~~~rTkVi~nt~NPvWNE~F~f~v~~~- 421 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+.. ....||+++++++||+|||+|.|.+...
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~---------------~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~ 81 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGT---------------SDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE 81 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSS---------------CCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGG
T ss_pred CCCEEEEEEEEeeCCCCCCCCCC---------------CCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHH
Confidence 35789999999999999998776 89999999953 2335999999999999999999998643
Q ss_pred --CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCCCCCCCCCCCcEEEEEEeecccc
Q 001122 422 --AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMER 487 (1149)
Q Consensus 422 --~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~p~~~ 487 (1149)
...|.|+|||+|.. .+++||++.|+|.+|..+...+.|++|....+......|+|.+.++|.|...
T Consensus 82 ~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~ 150 (284)
T 2r83_A 82 LAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAG 150 (284)
T ss_dssp CTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTTT
T ss_pred hCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcCC
Confidence 37899999999985 5899999999999999888889999998665433345679999999987543
No 34
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.63 E-value=9.2e-16 Score=151.40 Aligned_cols=105 Identities=25% Similarity=0.377 Sum_probs=91.1
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeeeCCCCCeeceEEEEEccC
Q 001122 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA----GAVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 345 l~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~----~~~~~rTkVi~nt~NPvWNE~F~f~v~~ 420 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+..
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~---------------~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 78 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGL---------------SDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKP 78 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCG
T ss_pred cCCEEEEEEEEeeCCCCCCCCCC---------------CCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCc
Confidence 56899999999999999988776 8999999993 2334599999999999999999999864
Q ss_pred C--CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCC
Q 001122 421 S--AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 421 ~--~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~ 465 (1149)
. ...|.|+|||+|.. .+++||++.|+|.+|..+. .+.||+|.+.
T Consensus 79 ~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 79 SDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred hhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 3 35899999999985 5889999999999998765 7899999764
No 35
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=1.2e-15 Score=152.00 Aligned_cols=102 Identities=15% Similarity=0.172 Sum_probs=87.5
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE---CCEEEeeeeeeeCCCCCeeceEEEEEccCC-
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV---AGAVVGRTFVISNSEDPVWQQHFYVPVAHS- 421 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l---~~~~~~rTkVi~nt~NPvWNE~F~f~v~~~- 421 (1149)
.+.|.|+|++|+ ++|..|. +||||+|.+ ++....||+|+++++||+|||+|.|.+...
T Consensus 25 ~~~L~V~v~~a~---~~d~~g~---------------sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~ 86 (138)
T 1wfm_A 25 KAELFVTRLEAV---TSNHDGG---------------CDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEE 86 (138)
T ss_dssp TTEEEEEEEEEE---CCCCSSC---------------CCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTS
T ss_pred CCEEEEEEEEEE---cCCCCCC---------------cceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHH
Confidence 468999999999 3677776 899999999 344456999999999999999999998654
Q ss_pred --CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCC
Q 001122 422 --AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 422 --~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~ 465 (1149)
...|+|+|||+|.. .+++||++.|+|.++..+...+.|++|...
T Consensus 87 l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 87 LPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp STTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred cCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 36899999999985 588999999999999877778899999754
No 36
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=7.6e-16 Score=153.40 Aligned_cols=107 Identities=22% Similarity=0.257 Sum_probs=89.3
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeeeCCCCCeeceEEEEEccCC
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--A--VVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~--~--~~~rTkVi~nt~NPvWNE~F~f~v~~~ 421 (1149)
.+.|.|+|++|++|+.+|..+ +||||+|.+.. . ...||++++++.||+|||+|.|.+...
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g----------------~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 86 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG----------------SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLP 86 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC----------------CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHH
T ss_pred CCEEEEEEEEeECCCCCCCCC----------------CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHH
Confidence 468999999999999887654 69999999942 1 335999999999999999999998542
Q ss_pred ---CcEEEEEEEEccCCC---CcceeeEEEeceeeccCCceeeeeeecCCCCC
Q 001122 422 ---AAEVHFFVKDSDVVG---SELIGTVAIPVEQIYSGGKVEGTYPVLNGSGK 468 (1149)
Q Consensus 422 ---~~~L~~~V~D~D~~~---ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk 468 (1149)
...|.|+|||+|..+ +++||++.|++.++..+...+.||+|....++
T Consensus 87 ~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 87 EVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSGP 139 (142)
T ss_dssp HHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCSC
T ss_pred HhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCCC
Confidence 258999999999854 46999999999999877778899999865433
No 37
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.61 E-value=1.3e-15 Score=151.76 Aligned_cols=105 Identities=23% Similarity=0.318 Sum_probs=90.4
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCeeceEEEEE-cc
Q 001122 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVP-VA 419 (1149)
Q Consensus 345 l~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~----~~~~rTkVi~nt~NPvWNE~F~f~-v~ 419 (1149)
..|.|.|+|++|++|+.+|..|. +||||+|.+.+ ....||++++++.||+|||+|.|. +.
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~ 91 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGL---------------ADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGIT 91 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSC---------------CCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCC
T ss_pred CCCEEEEEEEEecCCCCCCCCCC---------------CCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccC
Confidence 45789999999999999998776 89999999965 234599999999999999999998 54
Q ss_pred CC---CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecC
Q 001122 420 HS---AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLN 464 (1149)
Q Consensus 420 ~~---~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~ 464 (1149)
.. ...|.|+|||+|.. .+++||++.|++.+|..+.....|++|..
T Consensus 92 ~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 92 EEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp HHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred HHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 32 26899999999986 47899999999999998888888998853
No 38
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.60 E-value=1.3e-15 Score=153.81 Aligned_cols=107 Identities=22% Similarity=0.338 Sum_probs=85.5
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEE--EeeeeeeeCCCCCeeceEEEEEccCC
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAV--VGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~~~~--~~rTkVi~nt~NPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..+. +||||+|.+ ++.. ..||+++++++||+|||+|.|.+...
T Consensus 29 ~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 93 (153)
T 1w15_A 29 TNTLTVVVLKARHLPKSDVSGL---------------SDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCE 93 (153)
T ss_dssp TTEEEEEEEEEESCC------C---------------CCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSS
T ss_pred CCEEEEEEEEeECCCCcCCCCC---------------CCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHH
Confidence 4789999999999999988776 899999999 5543 45999999999999999999998755
Q ss_pred C---cEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCCCCCC
Q 001122 422 A---AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKP 469 (1149)
Q Consensus 422 ~---~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~ 469 (1149)
. ..|.|+|||+|.. .+++||++.|++.+ .+...+.|++|++..+++
T Consensus 94 ~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~p~~~ 143 (153)
T 1w15_A 94 SLEEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICDFPRRQ 143 (153)
T ss_dssp SSTTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHHSTTCC
T ss_pred HhCceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHhCCCCe
Confidence 2 6899999999985 58899999999988 345567899998765553
No 39
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.59 E-value=3.6e-15 Score=147.95 Aligned_cols=105 Identities=24% Similarity=0.365 Sum_probs=87.6
Q ss_pred eceEEEEEEEEeeCCCCCCCC-CccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeeeCCCCCeeceEEEEE-ccC
Q 001122 345 LHGNLDIWIYSAKNLPNMDMF-HKTLGGMFNSQMNTKITSDPYVTIAVAG--AVVGRTFVISNSEDPVWQQHFYVP-VAH 420 (1149)
Q Consensus 345 l~GtL~VtVieAr~L~~~D~~-g~~~~~~~~k~~~~~~~sDPYV~V~l~~--~~~~rTkVi~nt~NPvWNE~F~f~-v~~ 420 (1149)
..+.|.|+|++|++|+.+|.+ +. +||||+|.+.. ....||++++++.||+|||+|.|. +..
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~---------------~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~ 84 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMT---------------SDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPY 84 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTB---------------CEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCC---------------CCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCH
Confidence 347899999999999999875 65 89999999953 344699999999999999999996 654
Q ss_pred C---CcEEEEEEEEccCC-CCcceeeEEEeceeeccCC-ceeeeeeecC
Q 001122 421 S---AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGG-KVEGTYPVLN 464 (1149)
Q Consensus 421 ~---~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~-~~~~W~~L~~ 464 (1149)
. ...|.|+|||+|.. .+++||++.|+|.+|..+. ....|++|..
T Consensus 85 ~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 85 TQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp TTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred HHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 2 36899999999985 5889999999999998753 4467799864
No 40
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.59 E-value=8.7e-16 Score=151.58 Aligned_cols=107 Identities=20% Similarity=0.304 Sum_probs=90.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCeeceEEEEEccCC
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~----~~~~rTkVi~nt~NPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..|. +||||+|.+.+ ....||++++++.||+|||+|.|.+...
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~ 79 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGT---------------SDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTE 79 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTB---------------CCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGG
T ss_pred CCeEEEEEEEeeCCCCcCCCCC---------------cCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChh
Confidence 4789999999999999988776 89999999964 2346999999999999999999998655
Q ss_pred C---cEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCCCCCC
Q 001122 422 A---AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKP 469 (1149)
Q Consensus 422 ~---~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~ 469 (1149)
. ..|.|+|||+|.. .+++||++.|++.++.. ..+.|++|+...+++
T Consensus 80 ~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~--~~~~W~~l~~~~~~~ 129 (138)
T 3n5a_A 80 KLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPG--EVKHWKDMIARPRQP 129 (138)
T ss_dssp GGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCHH--HHHHHHHHHHSTTCC
T ss_pred hcCceEEEEEEEECCCCCCCcEEEEEEEccccCCh--HHHHHHHHHhCCCCe
Confidence 3 6899999999985 58899999999998543 456899998776664
No 41
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.58 E-value=5e-15 Score=146.70 Aligned_cols=116 Identities=20% Similarity=0.279 Sum_probs=81.2
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeee-CCCCCeeceEEEEEccCCCcE
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVIS-NSEDPVWQQHFYVPVAHSAAE 424 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~-nt~NPvWNE~F~f~v~~~~~~ 424 (1149)
.|.|.|+|++|++|.. .|. +||||+|... .. ||+++. ++.||+|||+|.|.+......
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~---------------~DPYv~v~~~--~~-kt~~~~~~t~nP~WnE~f~f~v~~~~~~ 62 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEK---------------FNTYVTLKVQ--NV-KSTTIAVRGSQPSWEQDFMFEINRLDLG 62 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGG---------------CEEEEEEEET--TE-EEECCCEESSSCEEEEEEEEEECCCSSE
T ss_pred ceEEEEEEEEeECCCC---CCC---------------cCeEEEEEec--CE-EEeEecCCCCCceECCEEEEEEeCCCCe
Confidence 3789999999998852 344 8999999932 22 555554 699999999999999877788
Q ss_pred EEEEEEEccCCCCcceeeEEEeceeeccCC------ceeeeeeecCCCCCCC----CCCCcEEEEEEe
Q 001122 425 VHFFVKDSDVVGSELIGTVAIPVEQIYSGG------KVEGTYPVLNGSGKPC----KPGATLTLSIQY 482 (1149)
Q Consensus 425 L~~~V~D~D~~~ddfIG~a~IpL~~L~~G~------~~~~W~~L~~~~gk~~----~~~g~L~L~l~f 482 (1149)
|.|+|||+|..+|++||++.|+|.+|.... ....|+.+...+|+.+ ..++.+.+.++|
T Consensus 63 L~~~V~D~d~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 63 LTVEVWNKGLIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EEEEEEECCSSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred EEEEEEECCCCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 999999999667899999999999986432 1122344443444432 234567777776
No 42
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.58 E-value=5.7e-15 Score=150.15 Aligned_cols=90 Identities=30% Similarity=0.409 Sum_probs=78.4
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeeeCCCCCeeceEEEEEccCC
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--A--VVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~--~--~~~rTkVi~nt~NPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..|. +||||+|.+.. . ...||++++++.||+|||+|.|.+...
T Consensus 24 ~~~L~V~v~~a~~L~~~d~~g~---------------~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 88 (159)
T 1tjx_A 24 AGKLTVVILEAKNLKKMDVGGL---------------SDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFE 88 (159)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CCEEEEEEEEeeCCCCccCCCC---------------CCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHH
Confidence 5789999999999999998776 89999999952 2 346999999999999999999998644
Q ss_pred ---CcEEEEEEEEccCC-CCcceeeEEEeceee
Q 001122 422 ---AAEVHFFVKDSDVV-GSELIGTVAIPVEQI 450 (1149)
Q Consensus 422 ---~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L 450 (1149)
...|.|+|||+|.. .+++||++.|++..+
T Consensus 89 ~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 89 QIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred HhCCcEEEEEEEECCCCCCCceEEEEEECCCCC
Confidence 35799999999985 588999999999865
No 43
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.58 E-value=6.8e-15 Score=150.77 Aligned_cols=106 Identities=22% Similarity=0.341 Sum_probs=89.7
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCeeceEEEEEccCC
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~----~~~~rTkVi~nt~NPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..|. +||||+|.+.+ ....||++++++.||+|||+|.|.+...
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~---------------~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 100 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGY---------------SDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHS 100 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CCEEEEEEEEeECCCCccCCCC---------------CCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchH
Confidence 5789999999999999998776 89999999975 2346999999999999999999998643
Q ss_pred ---CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCCCCC
Q 001122 422 ---AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGK 468 (1149)
Q Consensus 422 ---~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk 468 (1149)
...|.|+|||+|.. .+++||++.|++.++. ...+.|++|++..++
T Consensus 101 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~W~~l~~~~~~ 149 (166)
T 2cm5_A 101 DLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWYECLKNKDK 149 (166)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH--HHHHHHHHHHHCTTC
T ss_pred hcCCCEEEEEEEECCCCCCCcEEEeEEEecccCC--chhHHHHHHHhCCCC
Confidence 35899999999986 5889999999999864 345678888766554
No 44
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=2.7e-15 Score=150.47 Aligned_cols=109 Identities=19% Similarity=0.257 Sum_probs=87.5
Q ss_pred ceEEEEEEEEeeCCCCC-CCCCccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeeeCCCCCeeceEEEEEccCC-
Q 001122 346 HGNLDIWIYSAKNLPNM-DMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--AVVGRTFVISNSEDPVWQQHFYVPVAHS- 421 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~-D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~--~~~~rTkVi~nt~NPvWNE~F~f~v~~~- 421 (1149)
.|.|.|+|++|++|+.. |..|. ++ ....+||||+|.+.. ....||++++++.||+|||+|.|.+...
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~--~~-------~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 95 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGS--RQ-------DMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLE 95 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCS--SC-------TTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHH
T ss_pred CCEEEEEEEEEeCCCCccccccc--cc-------cCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHH
Confidence 47899999999999983 55431 00 011289999999963 2345999999999999999999998643
Q ss_pred --CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeec
Q 001122 422 --AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVL 463 (1149)
Q Consensus 422 --~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~ 463 (1149)
...|+|+|||+|.. .+++||++.|+|.+|..+...+.|++|.
T Consensus 96 l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~ 140 (147)
T 2enp_A 96 AQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALI 140 (147)
T ss_dssp HHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred hccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEee
Confidence 35899999999985 5789999999999998776678899996
No 45
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.54 E-value=2.1e-14 Score=142.83 Aligned_cols=117 Identities=16% Similarity=0.304 Sum_probs=103.9
Q ss_pred EEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeee-CCCCCeeceEEEEEccCC---Cc
Q 001122 348 NLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVIS-NSEDPVWQQHFYVPVAHS---AA 423 (1149)
Q Consensus 348 tL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~-nt~NPvWNE~F~f~v~~~---~~ 423 (1149)
.|+|+|.+|.+|+ |+ +|||++|.+.+.+. |||+++ ++.||+|||.|.|++..+ .+
T Consensus 22 sL~V~l~~a~~Lp-----g~---------------~Dp~akv~FRg~k~-kTkvi~~~~~npvfnE~F~wpl~~~ld~~e 80 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GR---------------ADRIAKVTFRGQSF-YSRVLENCEDVADFDETFRWPVASSIDRNE 80 (144)
T ss_dssp EEEEEEEEEESCC-----SC---------------EEEEEEEEETTEEE-ECCCEEEECSCEEEEEEEEEEESSCCCTTC
T ss_pred EEEEEEEEecCCC-----CC---------------CCCeEEEEEeccce-eeEEeccCCCCceEcceEEecCCCCCCCCC
Confidence 3999999999999 34 89999999998885 999998 599999999999998654 47
Q ss_pred EEEEEEEEccC-CCCcceeeEEEeceeeccCCceeeeeeecCCCCCCCCCCCcEEEEEEeecccc
Q 001122 424 EVHFFVKDSDV-VGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMER 487 (1149)
Q Consensus 424 ~L~~~V~D~D~-~~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~p~~~ 487 (1149)
.|.|.|+|++. .++++||++.|+|.+|..+.....+.+|+|.++++.+ +.|.|.|+|.|.+.
T Consensus 81 ~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~--a~I~l~l~Y~pp~g 143 (144)
T 3l9b_A 81 VLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIK--TSLSMEVRYQAADG 143 (144)
T ss_dssp EEEEEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEE--EEEEEEEEEEETTC
T ss_pred EEEEEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccc--cEEEEEEEecCCCC
Confidence 89999999998 5688999999999999987778888999999999765 79999999998653
No 46
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.51 E-value=7.2e-14 Score=140.87 Aligned_cols=133 Identities=17% Similarity=0.239 Sum_probs=103.1
Q ss_pred HHHHHHHHHHHHhhcceEEEEEeccceeeEEeCCCCchHHHHHHHHHHHhhcCCcEEEEEecCCCccccccccccccccc
Q 001122 545 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQT 624 (1149)
Q Consensus 545 ~~f~al~eAI~~Ar~sI~I~~W~~~p~i~L~rd~~~~~g~~L~dlL~~kA~rGVkVrILvwD~~gs~~~~g~k~~g~~~t 624 (1149)
..++.+.++|++|+++|+|+.|.|. ...|.++|.++++|||+||||+ |...... .
T Consensus 14 ~~~~~~~~~i~~A~~~I~i~~~~~~-------------~~~i~~aL~~a~~rGV~Vril~-~~~~~~~-----------~ 68 (155)
T 1byr_A 14 SARVLVLSAIDSAKTSIRMMAYSFT-------------APDIMKALVAAKKRGVDVKIVI-DERGNTG-----------R 68 (155)
T ss_dssp HHHHHHHHHHHHCSSEEEEEESSBC-------------CHHHHHHHHHHHHTTCEEEEEE-ESTTCCS-----------H
T ss_pred cHHHHHHHHHHHHhhEEEEEEEEeC-------------CHHHHHHHHHHHHCCCEEEEEE-eCccccc-----------c
Confidence 5689999999999999999998652 1578999999999999999997 5433210 0
Q ss_pred ccHHHHHHhhcCCcEEEEccCcccccccccccccccccccccceeEEecCCCCCCCccEEEEEccccCCCCCCCCCCCCc
Q 001122 625 HDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPL 704 (1149)
Q Consensus 625 ~~~~t~~~l~~~gV~v~l~p~~~~~~~~~~~~~~~~~~~~HHQKiVVVD~~~~~~~r~~vAFVGGiDL~dgRwDt~~H~l 704 (1149)
......+.|+..|+++..+.. ...+|.|++|||++ ++++||.|++...+
T Consensus 69 ~~~~~~~~L~~~gv~v~~~~~----------------~~~~H~K~~iiD~~--------~~~iGS~N~~~~~~------- 117 (155)
T 1byr_A 69 ASIAAMNYIANSGIPLRTDSN----------------FPIQHDKVIIVDNV--------TVETGSFNFTKAAE------- 117 (155)
T ss_dssp HHHHHHHHHHHTTCCEEEECS----------------SSCCCCCEEEETTT--------EEEEESCCBSHHHH-------
T ss_pred ccHHHHHHHHHCCCeEEEcCC----------------cccccceEEEECCC--------EEEEECCCCCcccc-------
Confidence 112345567788999877532 12589999999996 99999999986311
Q ss_pred ccccccccCCCCCCCcccCCCCCCCCCCeeeeeeEEcC-H-HHHHHHHHHHHHHHhh
Q 001122 705 FRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDG-P-AAYDVLTNFEERWRKA 759 (1149)
Q Consensus 705 ~~~l~~~~~~Dy~np~~~~~~~~~pr~PWHDv~vrI~G-P-aa~Dl~~~F~qrWn~a 759 (1149)
..|++..+.|+| | .+.++...|.+.|+.+
T Consensus 118 --------------------------~~n~E~~~~i~~~~~l~~~~~~~f~~~w~~~ 148 (155)
T 1byr_A 118 --------------------------TKNSENAVVIWNMPKLAESFLEHWQDRWNQG 148 (155)
T ss_dssp --------------------------HTSCEEEEEEESCHHHHHHHHHHHHHHHHTC
T ss_pred --------------------------ccCcccEEEEcCcHHHHHHHHHHHHHHHHhC
Confidence 235789999999 3 7999999999999865
No 47
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.49 E-value=6.7e-14 Score=156.60 Aligned_cols=124 Identities=26% Similarity=0.330 Sum_probs=99.2
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEEEeeeeeeeCCCCCeeceEEEEEccCC--
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAVVGRTFVISNSEDPVWQQHFYVPVAHS-- 421 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~~~~~~rTkVi~nt~NPvWNE~F~f~v~~~-- 421 (1149)
.|.|.|+|++|++|+.+|..|. +||||+|.+ ++....||+++++++||+|||+|.|.+...
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~---------------~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 83 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGF---------------SDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAEL 83 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSC---------------CCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGG
T ss_pred CCEEEEEEEEeECCCCcCCCCC---------------cCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHh
Confidence 4689999999999999998776 899999999 233345999999999999999999998543
Q ss_pred -CcEEEEEEEEccCC-CCcceeeEEEe-ceeecc-CCceeeeeeecCCCCCCCCCCCcEEEEEEeecc
Q 001122 422 -AAEVHFFVKDSDVV-GSELIGTVAIP-VEQIYS-GGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPM 485 (1149)
Q Consensus 422 -~~~L~~~V~D~D~~-~ddfIG~a~Ip-L~~L~~-G~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~p~ 485 (1149)
...|+|+|||+|.. .+++||++.|+ +.++.. +...+.|++|....++. ...|+|++.+.|.|.
T Consensus 84 ~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 84 AQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEK-ADLGELNFSLCYLPT 150 (296)
T ss_dssp SSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCC-SCCCEEEEEEEEETT
T ss_pred cCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccc-cccceEEEEEEeccc
Confidence 25899999999985 58999999996 444443 34567899997654432 345799999998764
No 48
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.49 E-value=6.8e-14 Score=141.04 Aligned_cols=119 Identities=19% Similarity=0.147 Sum_probs=93.1
Q ss_pred HHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCCchh
Q 001122 841 SIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAAT 920 (1149)
Q Consensus 841 sI~~ayl~aI~~Ar~~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rgv~V~IVlP~~Peg~p~~~s~ 920 (1149)
++.++++++|++|+++|+|+++||. + ..+..+|.+|. ++||+|+||++..... .
T Consensus 14 ~~~~~~~~~i~~A~~~I~i~~~~~~-~-----------------~~i~~aL~~a~--~rGV~Vril~~~~~~~------~ 67 (155)
T 1byr_A 14 SARVLVLSAIDSAKTSIRMMAYSFT-A-----------------PDIMKALVAAK--KRGVDVKIVIDERGNT------G 67 (155)
T ss_dssp HHHHHHHHHHHHCSSEEEEEESSBC-C-----------------HHHHHHHHHHH--HTTCEEEEEEESTTCC------S
T ss_pred cHHHHHHHHHHHHhhEEEEEEEEeC-C-----------------HHHHHHHHHHH--HCCCEEEEEEeCcccc------c
Confidence 6889999999999999999998883 2 25667777664 5899999999975320 0
Q ss_pred HHHHHHHHHhHhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCChhhhccccCcccceee
Q 001122 921 QRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVH 1000 (1149)
Q Consensus 921 ~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~dYl~f~~L~~re~~~~~~~~~~~~~~~~n~~~~~~~~~r~~~iYVH 1000 (1149)
+ .....++.|.+.|+++++.. ....+|
T Consensus 68 -----~-------~~~~~~~~L~~~gv~v~~~~-----------------------------------------~~~~~H 94 (155)
T 1byr_A 68 -----R-------ASIAAMNYIANSGIPLRTDS-----------------------------------------NFPIQH 94 (155)
T ss_dssp -----H-------HHHHHHHHHHHTTCCEEEEC-----------------------------------------SSSCCC
T ss_pred -----c-------ccHHHHHHHHHCCCeEEEcC-----------------------------------------Cccccc
Confidence 1 11246778889999876310 012689
Q ss_pred eEEEEEeCeEEEEcccCcccccCCCCCCcceEEEEeCc-ch
Q 001122 1001 SKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQP-EY 1040 (1149)
Q Consensus 1001 SKlmIVDD~~viIGSANiN~RSm~G~~DsEiav~i~dp-~~ 1040 (1149)
+|+|||||++++|||+||+.||+. .|.|+++.+.++ +.
T Consensus 95 ~K~~iiD~~~~~iGS~N~~~~~~~--~n~E~~~~i~~~~~l 133 (155)
T 1byr_A 95 DKVIIVDNVTVETGSFNFTKAAET--KNSENAVVIWNMPKL 133 (155)
T ss_dssp CCEEEETTTEEEEESCCBSHHHHH--TSCEEEEEEESCHHH
T ss_pred ceEEEECCCEEEEECCCCCccccc--cCcccEEEEcCcHHH
Confidence 999999999999999999999997 799999999984 54
No 49
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.49 E-value=4.4e-14 Score=145.80 Aligned_cols=85 Identities=24% Similarity=0.311 Sum_probs=71.4
Q ss_pred eEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeee-CCCCCeeceEEEEEccCCCcEE
Q 001122 347 GNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVIS-NSEDPVWQQHFYVPVAHSAAEV 425 (1149)
Q Consensus 347 GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~-nt~NPvWNE~F~f~v~~~~~~L 425 (1149)
|.|.|+|++|++|. ..++ +||||+|.. +. .||+++. ++.||+|||+|.|.+......|
T Consensus 14 ~~L~V~V~~A~~l~---~~g~---------------~DPYV~v~~--~~-~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L 72 (167)
T 2cjs_A 14 SLLCVGVKKAKFDG---AQEK---------------FNTYVTLKV--QN-VESTTIAVRGSQPSWEQDFMFEINRLDLGL 72 (167)
T ss_dssp CEEEEEEEEEECSS---CGGG---------------CEEEEEEEE--TT-EEEECCCEESSSCEEEEEEEEECCCTTSEE
T ss_pred EEEEEEEEEEECCC---CCCC---------------CCeEEEEEe--cc-eEEEEecCCCCCCCCCCEEEEEeeCCCCEE
Confidence 57999999999884 2344 899999992 22 2666665 6999999999999998777889
Q ss_pred EEEEEEccCCCCcceeeEEEeceeecc
Q 001122 426 HFFVKDSDVVGSELIGTVAIPVEQIYS 452 (1149)
Q Consensus 426 ~~~V~D~D~~~ddfIG~a~IpL~~L~~ 452 (1149)
.|+|||+|..+|++||++.|+|.+|..
T Consensus 73 ~~~V~D~d~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 73 TVEVWNKGLIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp EEEEEECCSSCCEEEEEEEEEGGGSCB
T ss_pred EEEEEECCCCCCceEEEEEEEHHHhcc
Confidence 999999996679999999999999864
No 50
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.48 E-value=4.6e-14 Score=151.00 Aligned_cols=153 Identities=13% Similarity=0.101 Sum_probs=106.4
Q ss_pred cchhHHHHHHHHHHHHhhcceEEEEEeccceeeEEeCCCCchHHHHHHHHHHHhhcCCcEEEEEecCCCccccccccccc
Q 001122 541 YVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDG 620 (1149)
Q Consensus 541 y~~~~~f~al~eAI~~Ar~sI~I~~W~~~p~i~L~rd~~~~~g~~L~dlL~~kA~rGVkVrILvwD~~gs~~~~g~k~~g 620 (1149)
+...+.++.|+++|++||++|+|+.|.|. + ..|.++|++||+|||+||||+ |...+....
T Consensus 54 ~~~~~~~~~ii~~I~~A~~sI~i~~Y~~~-------~------~~I~~aL~~Aa~RGV~VRii~-D~~~~~~~~------ 113 (220)
T 4gel_A 54 HCSLRNVAKIVEQIDRAVYSIDLAIYTFT-------S------LFLADSIKRALQRGVIIRIIS-DGEMVYSKG------ 113 (220)
T ss_dssp TCHHHHHHHHHHHHHTCSSEEEEECSCBC-------C------HHHHHHHHHHHHHTCEEEEEC-CTTTTTSTT------
T ss_pred cCcHHHHHHHHHHHHHhhhEEEEEEEEeC-------C------HHHHHHHHHHHHcCCeEEEEE-echhhhhhH------
Confidence 45567899999999999999999998652 2 579999999999999999996 875542110
Q ss_pred ccccccHHHHHHhhcCCcEEEEccCccccccccc--cc--ccccccccccceeEEecCCCCCCCccEEEEEccccCCCCC
Q 001122 621 VMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWA--KQ--KEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGR 696 (1149)
Q Consensus 621 ~~~t~~~~t~~~l~~~gV~v~l~p~~~~~~~~~~--~~--~~~~~~~~HHQKiVVVD~~~~~~~r~~vAFVGGiDL~dgR 696 (1149)
.....+...++.+............++ .. ...+...+.|.|++|||+. ++++||.|++..-
T Consensus 114 -------~~~~~~~~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~~--------~v~~GS~N~t~~s 178 (220)
T 4gel_A 114 -------SQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYS--------IVISGSVNWTALG 178 (220)
T ss_dssp -------CHHHHHHHTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCCC--------EEEEESCCBSHHH
T ss_pred -------HHHHHHHhcCCcEEeecccccccceeEEEcchhcccccccccceeccccccc--------eEEecCccccccc
Confidence 122334445555544322111111110 00 0112346788888888885 9999999987632
Q ss_pred CCCCCCCcccccccccCCCCCCCcccCCCCCCCCCCeeeeeeEEcCHHHHHHHHHHHHHHHhhc
Q 001122 697 YDNPHHPLFRTLQTLHKDDYHNPTFTGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAS 760 (1149)
Q Consensus 697 wDt~~H~l~~~l~~~~~~Dy~np~~~~~~~~~pr~PWHDv~vrI~GPaa~Dl~~~F~qrWn~at 760 (1149)
. ...|.|+.+...|++|.++.+.|.+.|+...
T Consensus 179 ~--------------------------------~~N~E~~~vi~~~~~a~~~~~~F~~~W~~~~ 210 (220)
T 4gel_A 179 L--------------------------------GGNWENCIITADDKLTATFQAEFQRMWRAFA 210 (220)
T ss_dssp H--------------------------------HTSBEEEEEECCHHHHHHHHHHHHHHHHHSE
T ss_pred c--------------------------------ccCceEEEEEECHHHHHHHHHHHHHHHHhcc
Confidence 1 2467899998899999999999999999753
No 51
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.48 E-value=1.3e-13 Score=164.94 Aligned_cols=115 Identities=18% Similarity=0.276 Sum_probs=98.4
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeeceEEEEEccCCC-cE
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSA-AE 424 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~nt~NPvWNE~F~f~v~~~~-~~ 424 (1149)
.|+|.|+|++|++|+.+|..|. +||||+|.+++.+ .+|++++++.||+|||+|.|.+.... ..
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~---------------sdpyv~v~~~~~~-~~T~~~~~t~nP~w~e~f~f~~~~~~~~~ 449 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGK---------------SNPYCEISMGSQS-YTTRTIQDTLNPKWNFNCQFFIKDLYQDV 449 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEETTEE-EECCCCSSCSSCEEEEEEEEEESCTTTCE
T ss_pred CceEEEEeceeecCCCCCCCCC---------------CCeEEEEEECCee-ccCCccCCCCCCccCceEEEEecCCCCCE
Confidence 3689999999999999998886 8999999998876 49999999999999999999987654 67
Q ss_pred EEEEEEEccCC-CCcceeeEEEeceeeccCCc----eeeeeeecCCCCCCCCCCCcEEEEEEe
Q 001122 425 VHFFVKDSDVV-GSELIGTVAIPVEQIYSGGK----VEGTYPVLNGSGKPCKPGATLTLSIQY 482 (1149)
Q Consensus 425 L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~----~~~W~~L~~~~gk~~~~~g~L~L~l~f 482 (1149)
|+|+|||+|.. .+++||++.+++.+|..|.. .+.|++|.+. ..|+|+|.+.+
T Consensus 450 l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~~G~i~l~~~l 506 (510)
T 3jzy_A 450 LCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------PTGEVWVRFDL 506 (510)
T ss_dssp EEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------SSCEEEEEEEE
T ss_pred EEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC------CCceEEEEEEE
Confidence 99999999985 48899999999999987643 6789998533 23577777765
No 52
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.47 E-value=5.4e-15 Score=176.66 Aligned_cols=124 Identities=22% Similarity=0.355 Sum_probs=23.3
Q ss_pred eeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCC---CCCeeceEEEEEcc
Q 001122 343 LLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNS---EDPVWQQHFYVPVA 419 (1149)
Q Consensus 343 ~Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~nt---~NPvWNE~F~f~v~ 419 (1149)
....|.|+|+|++|++|+++ .||||++.+++...+||+++++| .||+|||+|.|.+.
T Consensus 7 ~r~~~~L~V~VieAk~L~~~--------------------ddpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~ 66 (483)
T 3bxj_A 7 RRVDNVLKLWIIEARELPPK--------------------KRYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNL 66 (483)
T ss_dssp EEEEECC-----------------------------------------------------------------CCEECC--
T ss_pred ceeccEEEEEEEEcCCcCCC--------------------CCCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecC
Confidence 34568899999999999853 38999999998877899999999 99999999999976
Q ss_pred CCCcEEEEEEEEc-c----CCCCcceeeEEEeceeeccCCceeeeeeecCCCC---------------------CCCCCC
Q 001122 420 HSAAEVHFFVKDS-D----VVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSG---------------------KPCKPG 473 (1149)
Q Consensus 420 ~~~~~L~~~V~D~-D----~~~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~g---------------------k~~~~~ 473 (1149)
.....|.|+|||+ | ..+|++||++.|++.+|..|...+.||+|.+.++ +..+.+
T Consensus 67 ~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~ 146 (483)
T 3bxj_A 67 PAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGC 146 (483)
T ss_dssp ----------------------------------------CCEECC----------------------------------
T ss_pred CCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCC
Confidence 5568899999994 5 2678999999999999998888899999976543 112345
Q ss_pred CcEEEEEEeeccc
Q 001122 474 ATLTLSIQYTPME 486 (1149)
Q Consensus 474 g~L~L~l~f~p~~ 486 (1149)
|.|+|+++|.+..
T Consensus 147 G~lrL~v~~~~~~ 159 (483)
T 3bxj_A 147 PAVRLKARYQTMS 159 (483)
T ss_dssp ----CEEEEEECC
T ss_pred ceEEEEEEeeeee
Confidence 7999999997754
No 53
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.45 E-value=1.4e-13 Score=145.63 Aligned_cols=132 Identities=16% Similarity=0.166 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCCchh
Q 001122 841 SIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAAT 920 (1149)
Q Consensus 841 sI~~ayl~aI~~Ar~~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rgv~V~IVlP~~Peg~p~~~s~ 920 (1149)
+....++++|++||++|+|+. |++++ .+|+.+|.+| ++|||+|+||+...-.. .
T Consensus 46 ~~~~~ll~~I~~A~~sI~i~~-y~~~~-----------------~~i~~aL~~a--a~rGV~Vrii~D~~~~~----~-- 99 (196)
T 4ggj_A 46 SSLSRLLRALLAARSSLELCL-FAFSS-----------------PQLGRAVQLL--HQRGVRVRVITDCDYMA----L-- 99 (196)
T ss_dssp CHHHHHHHHHHTCSSEEEEEE-SCBCC-----------------HHHHHHHHHH--HHTTCEEEEEESSCCC--------
T ss_pred HHHHHHHHHHHHhheEEEEEE-EEeCC-----------------HHHHHHHHHH--HHcCCcEEEEEeccccc----c--
Confidence 456789999999999999997 55543 2577788776 46899999999642110 0
Q ss_pred HHHHHHHHHhHhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCChhhhccccCcccceee
Q 001122 921 QRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVH 1000 (1149)
Q Consensus 921 ~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~dYl~f~~L~~re~~~~~~~~~~~~~~~~n~~~~~~~~~r~~~iYVH 1000 (1149)
..+.+..|.++|+++++.. ....+|
T Consensus 100 --------------~~~~~~~l~~~gi~v~~~~-----------------------------------------~~~~~H 124 (196)
T 4ggj_A 100 --------------NGSQIGLLRKAGIQVRHDQ-----------------------------------------DLGYMH 124 (196)
T ss_dssp ---------------CCHHHHHHHTTCEEEECC-----------------------------------------SSSCCC
T ss_pred --------------cHHHHHHHHhcCCCccccc-----------------------------------------cccccc
Confidence 0123567889999886310 012579
Q ss_pred eEEEEEeCeEEEEcccCcccccCCCCCCcceEEEEeCcchhhhhccCCCCchhHHHHHHHHHHH
Q 001122 1001 SKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYTWARMKRHPYGQIYGYRMSLWAEH 1064 (1149)
Q Consensus 1001 SKlmIVDD~~viIGSANiN~RSm~G~~DsEiav~i~dp~~~~~~~~~~~~g~i~~lR~~Lw~EH 1064 (1149)
+|+||||++++++||+||+.||+. .|.|..++++|++.+. .....=.++|.+.
T Consensus 125 ~K~~viD~~~~~~GS~N~t~~~~~--~n~E~~~~i~~~~~~~---------~~~~~F~~~W~~~ 177 (196)
T 4ggj_A 125 HKFAIVDKKVLITGSLNWTTQAIQ--NNRENVLIMEDTEYVR---------LFLEEFERIWEEF 177 (196)
T ss_dssp CEEEEETTTEEEEESCCBCHHHHH--HCCEEEEEECCHHHHH---------HHHHHHHHHHHHT
T ss_pred CcEEEEcceEEEecCccCChhhhc--ccceeEEEEECHHHHH---------HHHHHHHHHHHhC
Confidence 999999999999999999999998 7999999999887532 1222336788753
No 54
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.44 E-value=3.3e-13 Score=162.51 Aligned_cols=107 Identities=21% Similarity=0.264 Sum_probs=90.6
Q ss_pred eEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeeceEEEEEccC--CCcE
Q 001122 347 GNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAH--SAAE 424 (1149)
Q Consensus 347 GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~~rTkVi~nt~NPvWNE~F~f~v~~--~~~~ 424 (1149)
|.|.|+|++|++|+. |.+|+ +||||+|.+++.+ .||+|+++++||+|||+|.|.+.. ....
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~---------------sDPYV~v~l~~~~-~kTkvik~tlNP~Wne~f~f~~~~~~~~~~ 456 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTA---------------TDAYLKVFFGGQE-FRTGVVWNNNNPRWTDKMDFENVLLSTGGP 456 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSC---------------CCEEEEEEETTEE-EECCCBCSCSSCBCCCCEEEEEEETTTCCC
T ss_pred cEEEEEEEEccCCCc-ccCCC---------------cCeEEEEEECCEe-eeeeeecCCCCCCCCeEEEEEEecCCCCCE
Confidence 689999999999998 98887 8999999999977 699999999999999999998642 4578
Q ss_pred EEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCCCCCCCCCCCcEEEEEEee
Q 001122 425 VHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYT 483 (1149)
Q Consensus 425 L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~ 483 (1149)
|+|+|||+|.. .|||||++.++|. .|. .+.|++|- .|.|+++++.+
T Consensus 457 L~~~V~D~D~~~~dD~LG~~~~~L~---~g~-~~~~~~l~---------~G~l~~~~~~~ 503 (540)
T 3nsj_A 457 LRVQVWDADYGWDDDLLGSCDRSPH---SGF-HEVTCELN---------HGRVKFSYHAK 503 (540)
T ss_dssp EEEEEEECCSSSCCEEEEEEEECCC---SEE-EEEEEECS---------SSEEEEEEEEE
T ss_pred EEEEEEECCCCCCCCEEEEEEEEee---CCc-EEEEEEcC---------CeEEEEEEEEE
Confidence 99999999995 5689999999987 353 56788861 14788877754
No 55
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.37 E-value=3.3e-13 Score=167.25 Aligned_cols=103 Identities=22% Similarity=0.366 Sum_probs=91.8
Q ss_pred ceEEEEEEEEeeCCCC---CCCCCccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeeeCCCCCeeceEEEEEccC
Q 001122 346 HGNLDIWIYSAKNLPN---MDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~---~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~--~~~~rTkVi~nt~NPvWNE~F~f~v~~ 420 (1149)
.|+|.|+|++|++|+. +|..|+ +||||+|.+.+ ....||+|+++++||+|||+|.|.+..
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~---------------sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~ 81 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDT---------------PDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDP 81 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCC---------------CCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECT
T ss_pred ccEEEEEEEEEECCCCccccCCCCC---------------cCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecC
Confidence 3689999999999998 777666 89999999984 234599999999999999999999976
Q ss_pred C-CcEEEEEEEEccCCCCcceeeEEEeceeeccCCceeeeeeec
Q 001122 421 S-AAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVL 463 (1149)
Q Consensus 421 ~-~~~L~~~V~D~D~~~ddfIG~a~IpL~~L~~G~~~~~W~~L~ 463 (1149)
. ...|+|+|||+|..++++||++.|+|.+|..|...+.|++|.
T Consensus 82 ~~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 82 NQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp TSCCBCEEEEEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred CCCCEEEEEEEECCCCCCceeEEEEEEHHHcCCCCceEEEEecC
Confidence 4 578999999999977999999999999999888889999995
No 56
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.37 E-value=3.1e-12 Score=141.60 Aligned_cols=90 Identities=31% Similarity=0.437 Sum_probs=77.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC--CE--EEeeeeeeeCCCCCeeceEEEEEccCC
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA--GA--VVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~--~~--~~~rTkVi~nt~NPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..+. +||||+|.+. +. ...||++++++.||+|||+|.|.+...
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~---------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 213 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGL---------------SDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFE 213 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTT
T ss_pred CCceEEEEEEeECCCCcCCCCC---------------cCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHH
Confidence 4679999999999999998776 8999999984 33 345999999999999999999998654
Q ss_pred ---CcEEEEEEEEccCC-CCcceeeEEEeceee
Q 001122 422 ---AAEVHFFVKDSDVV-GSELIGTVAIPVEQI 450 (1149)
Q Consensus 422 ---~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L 450 (1149)
...|.|+|||+|.. ++++||++.|++..+
T Consensus 214 ~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 214 QIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp TGGGEEEEEEEEECCSSSCCCEEEEEEEETTCC
T ss_pred HhCceEEEEEEEeCCCCCCCcEEEEEEECCCCC
Confidence 35799999999985 588999999999874
No 57
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.27 E-value=1.1e-12 Score=146.79 Aligned_cols=109 Identities=28% Similarity=0.348 Sum_probs=88.8
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC--CE--EEeeeeeeeCCCCCeeceEEEEEccCC
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA--GA--VVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~--~~--~~~rTkVi~nt~NPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..|. +||||+|.+. +. ...||++++++.||+|||+|.|.+...
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~---------------~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 215 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGF---------------SDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPE 215 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSC---------------CCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSG
T ss_pred cceeEEEEEEeecCCccCCCCC---------------CCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHH
Confidence 3789999999999999998876 8999999996 32 335999999999999999999998754
Q ss_pred ---CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCCCCCCC
Q 001122 422 ---AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPC 470 (1149)
Q Consensus 422 ---~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~gk~~ 470 (1149)
...|.|+|||+|.. ++++||++.|++.++.. ...+.|+.|+...+++.
T Consensus 216 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~-~~~~~W~~~~~~~~~~~ 267 (296)
T 1dqv_A 216 SVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP-HGREHWAEMLANPRKPV 267 (296)
T ss_dssp GGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH-HHHHHHHTSSSSSSSCS
T ss_pred HccCcEEEEEEEeCCCCCCCceEEEEEECCccCCc-hhHHHHHHHHhCCCCce
Confidence 25799999999985 58899999999987643 13467777776555544
No 58
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.12 E-value=1.3e-10 Score=143.04 Aligned_cols=119 Identities=21% Similarity=0.237 Sum_probs=89.7
Q ss_pred HHHHHHHHhhcc-----EEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCCc
Q 001122 844 TAYVKAIRSAQH-----FIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGA 918 (1149)
Q Consensus 844 ~ayl~aI~~Ar~-----~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rgv~V~IVlP~~Peg~p~~~ 918 (1149)
.+++++|++|++ .|+| ++||+... ..++.+|++| +++|++|+||++..... ....
T Consensus 350 ~~v~~~I~~A~~dp~v~~I~i-t~Y~~~~d----------------~~I~~AL~~A--A~rGV~VrVLvd~~a~~-~~~~ 409 (687)
T 1xdp_A 350 EHVLELLRQASFDPSVLAIKI-NIYRVAKD----------------SRIIDSMIHA--AHNGKKVTVVVELQARF-DEEA 409 (687)
T ss_dssp HHHHHHHHHHHHCTTEEEEEE-EESSCCTT----------------CHHHHHHHHH--HHTTCEEEEEECTTCSS-TTTT
T ss_pred hhHHHHHHHHhhCCcceEEEE-EeeeecCc----------------HHHHHHHHHH--HhcCCEEEEEECCCccc-chhh
Confidence 468899999997 9999 89998432 1577777776 46899999999976411 0001
Q ss_pred hhHHHHHHHHHhHhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCChhhhccccCcccce
Q 001122 919 ATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIY 998 (1149)
Q Consensus 919 s~~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~dYl~f~~L~~re~~~~~~~~~~~~~~~~n~~~~~~~~~r~~~iY 998 (1149)
...+++.|.++|+++++. . ....
T Consensus 410 ----------------n~~~~~~L~~aGV~V~~~----~-------------------------------------~~~k 432 (687)
T 1xdp_A 410 ----------------NIHWAKRLTEAGVHVIFS----A-------------------------------------PGLK 432 (687)
T ss_dssp ----------------TTTTTHHHHHHTCEEEEC----C-------------------------------------TTCE
T ss_pred ----------------HHHHHHHHHHCCCEEEEe----c-------------------------------------CCcc
Confidence 113568899999998641 0 0124
Q ss_pred eeeEEEEEeC----eE---EEEcccCcccccCCCCCCcceEEEEeCcchh
Q 001122 999 VHSKGMIVDD----EY---VILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 999 VHSKlmIVDD----~~---viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
+|+|+||||+ ++ +.|||+|+|.||+. .++|+++.+.+++.+
T Consensus 433 ~H~Ki~VID~re~~~i~~~a~iGS~N~d~rs~~--~n~D~~l~i~~~~i~ 480 (687)
T 1xdp_A 433 IHAKLFLISRKENGEVVRYAHIGTGNFNEKTAR--LYTDYSLLTADARIT 480 (687)
T ss_dssp ECCEEEEEEEEETTEEEEEEEEESSCSCTTGGG--TEEEEEEEECCHHHH
T ss_pred ccceEEEEEeccCCeEEEEEEEeCCcCCcchhh--hcceEEEEEeCHHHH
Confidence 9999999994 54 99999999999997 899999999988643
No 59
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.11 E-value=1.9e-10 Score=122.94 Aligned_cols=138 Identities=16% Similarity=0.006 Sum_probs=87.9
Q ss_pred HHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCCchh
Q 001122 841 SIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAAT 920 (1149)
Q Consensus 841 sI~~ayl~aI~~Ar~~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rgv~V~IVlP~~Peg~p~~~s~ 920 (1149)
...+.++++|.+||+.|+|+. |++++ .+|+.+|.+|. +|||+|+||+....... .
T Consensus 58 ~~~~~ii~~I~~A~~sI~i~~-Y~~~~-----------------~~I~~aL~~Aa--~RGV~VRii~D~~~~~~----~- 112 (220)
T 4gel_A 58 RNVAKIVEQIDRAVYSIDLAI-YTFTS-----------------LFLADSIKRAL--QRGVIIRIISDGEMVYS----K- 112 (220)
T ss_dssp HHHHHHHHHHHTCSSEEEEEC-SCBCC-----------------HHHHHHHHHHH--HHTCEEEEECCTTTTTS----T-
T ss_pred HHHHHHHHHHHHhhhEEEEEE-EEeCC-----------------HHHHHHHHHHH--HcCCeEEEEEechhhhh----h-
Confidence 456778999999999999997 66554 26788888774 68999999997532110 0
Q ss_pred HHHHHHHHHhHhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCChhhhccccCcccceee
Q 001122 921 QRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVH 1000 (1149)
Q Consensus 921 ~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~dYl~f~~L~~re~~~~~~~~~~~~~~~~n~~~~~~~~~r~~~iYVH 1000 (1149)
...+..|...|+.+.+... ....+...-... + .... .+.....|
T Consensus 113 ---------------~~~~~~~~~~~~~~~~~~~------~~~~h~K~~viD----------~-~~~~----~~~~~~~H 156 (220)
T 4gel_A 113 ---------------GSQISMLAQLGVPVRVPIT------TNLMHNKFCIID----------G-FERV----EEIRLLRK 156 (220)
T ss_dssp ---------------TCHHHHHHHTTCCEEECCS------SSCBCCCEEEES----------C-HHHH----HHHHHHTT
T ss_pred ---------------HHHHHHHHhcCCcEEeecc------cccccceeEEEc----------c-hhcc----cccccccc
Confidence 0124556667766543100 000000000000 0 0000 00123568
Q ss_pred eEEEEEeCeEEEEcccCcccccCCCCCCcceEEEEeCcchh
Q 001122 1001 SKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 1001 SKlmIVDD~~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
.|++|+|+.++++||+||+.||+. .|.|..+++.++..+
T Consensus 157 ~K~~v~D~~~v~~GS~N~t~~s~~--~N~E~~~vi~~~~~a 195 (220)
T 4gel_A 157 LKFMRPCYSIVISGSVNWTALGLG--GNWENCIITADDKLT 195 (220)
T ss_dssp CSCCCCCCCEEEEESCCBSHHHHH--TSBEEEEEECCHHHH
T ss_pred eeccccccceEEecCccccccccc--cCceEEEEEECHHHH
Confidence 888888899999999999999998 699999999988653
No 60
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.09 E-value=1.3e-10 Score=144.15 Aligned_cols=107 Identities=24% Similarity=0.407 Sum_probs=90.7
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeeeCCCCCeeceEEEEEcc
Q 001122 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA----GAVVGRTFVISNSEDPVWQQHFYVPVA 419 (1149)
Q Consensus 344 Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~----~~~~~rTkVi~nt~NPvWNE~F~f~v~ 419 (1149)
+..+.|.|+|++|++|..+|..|. +||||+|.+. .....||+++++++||+|||+|.|.+.
T Consensus 169 ~~~~~L~V~v~~a~~L~~~d~~g~---------------sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~ 233 (674)
T 3pfq_A 169 IDREVLIVVVRDAKNLVPMDPNGL---------------SDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLK 233 (674)
T ss_dssp ECSSEEEEEEEEEESCCCCSTTSS---------------CCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECC
T ss_pred eccceeeeeeecccccCCCCcccc---------------cCcccccccccCccccccccccccccccCCCccceeeeecc
Confidence 346789999999999999998887 8999999992 222349999999999999999999986
Q ss_pred CC--CcEEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeeeecCCC
Q 001122 420 HS--AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGS 466 (1149)
Q Consensus 420 ~~--~~~L~~~V~D~D~~-~ddfIG~a~IpL~~L~~G~~~~~W~~L~~~~ 466 (1149)
.. ...|.|+|||+|.. .|++||++.+++.++..+. .++|+.|++..
T Consensus 234 ~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~ 282 (674)
T 3pfq_A 234 ESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQE 282 (674)
T ss_dssp STTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCTT
T ss_pred cCCccceeeeEEeecccccccccccccccchhhhccCC-cccceeecccc
Confidence 43 36799999999984 5889999999999998654 58999998643
No 61
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.06 E-value=1.6e-09 Score=105.00 Aligned_cols=89 Identities=19% Similarity=0.340 Sum_probs=75.5
Q ss_pred CCcEEEEEECCEEEe---ee-eeeeCCCCCeeceEEEEEccCCCcEEEEEEEEccCCCCcceeeEEEeceeec-----cC
Q 001122 383 SDPYVTIAVAGAVVG---RT-FVISNSEDPVWQQHFYVPVAHSAAEVHFFVKDSDVVGSELIGTVAIPVEQIY-----SG 453 (1149)
Q Consensus 383 sDPYV~V~l~~~~~~---rT-kVi~nt~NPvWNE~F~f~v~~~~~~L~~~V~D~D~~~ddfIG~a~IpL~~L~-----~G 453 (1149)
.||||.|.++..... +| ..+++|..|+|||+|.-.+. ....|.|.|++... +|++.++|++++|. .+
T Consensus 27 lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~---~fvAn~tV~~edL~~~c~~~~ 102 (126)
T 1yrk_A 27 NQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAAE---EPVSEVTVGVSVLAERCKKNN 102 (126)
T ss_dssp CCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEETT---EEEEEEEEEHHHHHHHHHTTT
T ss_pred CCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCC
Confidence 799999999987765 77 66777999999999999987 45699999997665 99999999999998 45
Q ss_pred CceeeeeeecCCCCCCCCCCCcEEEEEEee
Q 001122 454 GKVEGTYPVLNGSGKPCKPGATLTLSIQYT 483 (1149)
Q Consensus 454 ~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~ 483 (1149)
...+.|++|. +.|+|++.++|+
T Consensus 103 g~~e~WvdLe--------P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 103 GKAEFWLDLQ--------PQAKVLMSVQYF 124 (126)
T ss_dssp TEEEEEEECB--------SSCEEEEEEEEE
T ss_pred CceEEEEecc--------cCcEEEEEEEEe
Confidence 5778999994 346899999875
No 62
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.01 E-value=2.6e-09 Score=104.83 Aligned_cols=109 Identities=18% Similarity=0.290 Sum_probs=87.0
Q ss_pred EEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEE---eee-eeeeCCCCCeeceEEEEEccCCCcE
Q 001122 349 LDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVV---GRT-FVISNSEDPVWQQHFYVPVAHSAAE 424 (1149)
Q Consensus 349 L~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~~~~~---~rT-kVi~nt~NPvWNE~F~f~v~~~~~~ 424 (1149)
|+|.+.+++-.+-+...+. ..||||.|.++.... ++| ..+++|..|+|||+|.-.+. ....
T Consensus 12 lRi~l~~~~~~~~~~~~~~--------------~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~ 76 (138)
T 2enj_A 12 LRIGLSNFDCGSCQSCQGE--------------AVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRV 76 (138)
T ss_dssp EEEEEEEEECCCCCCSCCC--------------CCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCE
T ss_pred eEEEeeccccCCCCCcccc--------------cCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeE
Confidence 8999887765442221111 279999999998877 888 77777999999999999876 4569
Q ss_pred EEEEEEEccCCCCcceeeEEEeceeec-----cCCceeeeeeecCCCCCCCCCCCcEEEEEEee
Q 001122 425 VHFFVKDSDVVGSELIGTVAIPVEQIY-----SGGKVEGTYPVLNGSGKPCKPGATLTLSIQYT 483 (1149)
Q Consensus 425 L~~~V~D~D~~~ddfIG~a~IpL~~L~-----~G~~~~~W~~L~~~~gk~~~~~g~L~L~l~f~ 483 (1149)
|.|.|++... +||+.++|++++|. .+...+.|++|. +.|+|++.++|.
T Consensus 77 l~i~Vfh~a~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--------P~Gkl~v~i~~~ 129 (138)
T 2enj_A 77 MQIIVKGKNV---DLISETTVELYSLAERCRKNNGKTEIWLELK--------PQGRMLMNARYF 129 (138)
T ss_dssp EEEEEECSSC---SCCEEEEEESHHHHHHHHHTTTCEEEEEECB--------SSCEEEEEEEEC
T ss_pred EEEEEEcCCC---CeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEE
Confidence 9999997554 99999999999998 455779999994 346899999985
No 63
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=98.72 E-value=3.1e-08 Score=117.42 Aligned_cols=122 Identities=22% Similarity=0.299 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCC-CCch
Q 001122 841 SIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVP-TGAA 919 (1149)
Q Consensus 841 sI~~ayl~aI~~Ar~~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rgv~V~IVlP~~Peg~p-~~~s 919 (1149)
.+..+++++|++||++|+||..||.++. +..+++.+|.+|.++++||+|+||++.....-. .+..
T Consensus 37 ~~~~~l~~~I~~A~~~I~i~~~~~~~d~--------------~g~~l~~aL~~aa~r~~GV~Vril~D~~~~~r~~~g~~ 102 (458)
T 3hsi_A 37 EFKTQIIELIRNAKKRIYVTALYWQKDE--------------AGQEILDEIYRVKQENPHLDVKVLIDWHRAQRNLLGAE 102 (458)
T ss_dssp HHHHHHHHHHHTCSSEEEEEESCBCSSH--------------HHHHHHHHHHHHHHHSTTCEEEEEEETTGGGSCCC---
T ss_pred HHHHHHHHHHHhcCCEEEEEEEEEecCc--------------HHHHHHHHHHHHHhcCCCCEEEEEEECccccccccccc
Confidence 5789999999999999999999998653 245788888888777779999999997421000 0000
Q ss_pred hHHHHHHHHHhHhhHHHHHHHHHHHcC--Ccee--ecccccccccc--cCCcccccccCCCCCCCCCCCCChhhhccccC
Q 001122 920 TQRILFWQHKTMQMMYETIYKALVEVG--LEGA--FSPQDYLNFFC--LGNREVIDQTDTSLSGNPTAPNTPEALSRKSG 993 (1149)
Q Consensus 920 ~~~il~~~~rTm~~~~~si~~~L~~~G--v~~~--~~P~dYl~f~~--L~~re~~~~~~~~~~~~~~~~n~~~~~~~~~r 993 (1149)
.. + ...+++..|+++| +++. . |. ++.++
T Consensus 103 --~~--~-------~~~~~~~~L~~~g~nv~v~~~~--------f~~p~~~~~--------------------------- 136 (458)
T 3hsi_A 103 --KS--A-------TNADWYCEQRQTYQLPDDPNMF--------FGVPINTRE--------------------------- 136 (458)
T ss_dssp ------C-------CHHHHHHHHHHHHTCTTCCCCE--------EEECSSSSG---------------------------
T ss_pred --cc--c-------ccHHHHHHHHhhCCCceEeeee--------cCCcccccc---------------------------
Confidence 00 0 0125677888877 6654 2 11 11000
Q ss_pred cccceeeeEEEEEeCeEEEEcccCcccccCC
Q 001122 994 RFMIYVHSKGMIVDDEYVILGSANINQRSME 1024 (1149)
Q Consensus 994 ~~~iYVHSKlmIVDD~~viIGSANiN~RSm~ 1024 (1149)
.....|.|++||||++++.| +||+++.+.
T Consensus 137 -~~~r~H~Ki~viD~~v~~~G-~Ni~d~y~~ 165 (458)
T 3hsi_A 137 -VFGVLHVKGFVFDDTVLYSG-ASINNVYLH 165 (458)
T ss_dssp -GGCCEECCEEEETTEEEEES-CCBSTTTTT
T ss_pred -ccCcceeeEEEECCCEEEEe-eecCHHHhc
Confidence 12368999999999998878 999999986
No 64
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=98.50 E-value=2e-07 Score=111.85 Aligned_cols=137 Identities=12% Similarity=0.117 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHhhccEEEEEEeee-ecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCC--cEEEEEecCCCCCCCC
Q 001122 840 MSIHTAYVKAIRSAQHFIYIENQYF-IGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHER--FAAYIVIPMWPEGVPT 916 (1149)
Q Consensus 840 ~sI~~ayl~aI~~Ar~~IYIENQYF-i~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rg--v~V~IVlP~~Peg~p~ 916 (1149)
.++..+++++|++||++|+|+.-+| ..+. +..+++.+|.+|. ++| |+|+||+...+.+...
T Consensus 65 ~~~~~~l~~~I~~Ak~~I~i~~y~~~~~d~--------------~g~~i~~aL~~aa--~rGp~V~Vril~D~~g~~~~~ 128 (506)
T 1v0w_A 65 KRLLAKMTENIGNATRTVDISTLAPFPNGA--------------FQDAIVAGLKESA--AKGNKLKVRILVGAAPVYHMN 128 (506)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEESSCCCHH--------------HHHHHHHHHHHHH--HTTCCEEEEEEEECCC--CCC
T ss_pred HHHHHHHHHHHHHhccEEEEEEeeccCCCh--------------HHHHHHHHHHHHH--hCCCCcEEEEEEeCccccccc
Confidence 4689999999999999999997552 3211 2346777777765 467 9999999864321100
Q ss_pred CchhHHHHHHHHHhHhhHHHHHHHHHHHcCCceeecccccccccc--cCCcccccccCCCCCCCCCCCCChhhhccccCc
Q 001122 917 GAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFC--LGNREVIDQTDTSLSGNPTAPNTPEALSRKSGR 994 (1149)
Q Consensus 917 ~~s~~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~dYl~f~~--L~~re~~~~~~~~~~~~~~~~n~~~~~~~~~r~ 994 (1149)
. ....+.+.|+++|+++.. ++.+.. +... ..+
T Consensus 129 --~--------------~~~~~~~~L~~~g~~~~~----~~~~~~~~~~~~--------------------------~~~ 162 (506)
T 1v0w_A 129 --V--------------IPSKYRDELTAKLGKAAE----NITLNVASMTTS--------------------------KTA 162 (506)
T ss_dssp --C--------------HHHHHHHHHHHHHGGGGG----GEEEEEEEECSB--------------------------TTT
T ss_pred --c--------------CCHHHHHHHHhcccceee----cCcccccccccc--------------------------CCc
Confidence 0 012456778877765421 111110 0000 000
Q ss_pred ccceeeeEEEEEeCeEEEEcccCc-ccccCCCC-CCcceEEEEeCcc
Q 001122 995 FMIYVHSKGMIVDDEYVILGSANI-NQRSMEGT-RDTEIAMGAYQPE 1039 (1149)
Q Consensus 995 ~~iYVHSKlmIVDD~~viIGSANi-N~RSm~G~-~DsEiav~i~dp~ 1039 (1149)
....|.|++|||++++++||+|| +++.+... .-.++.+.++.+.
T Consensus 163 -~~r~H~K~~ViD~~~a~~Gg~Nl~~d~y~~~~~~~~D~~v~i~G~~ 208 (506)
T 1v0w_A 163 -FSWNHSKILVVDGQSALTGGINSWKDDYLDTTHPVSDVDLALTGPA 208 (506)
T ss_dssp -TBCBCCCEEEETTTEEEEESCCCCHHHHTSSSSCCBEEEEEEESHH
T ss_pred -cccceeeEEEECCcEEEeeccccCccccccCCCCceEEEEEEECHH
Confidence 12579999999999999999998 66655310 2378888888764
No 65
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=98.14 E-value=6.9e-06 Score=101.01 Aligned_cols=120 Identities=13% Similarity=0.139 Sum_probs=88.4
Q ss_pred HHHHHHHHHhhcc-----EEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCC
Q 001122 843 HTAYVKAIRSAQH-----FIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTG 917 (1149)
Q Consensus 843 ~~ayl~aI~~Ar~-----~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rgv~V~IVlP~~Peg~p~~ 917 (1149)
..+++++|++|++ .|.|+ .|.++.. ..|+.+|++| |++|++|+|++....-.. ..
T Consensus 354 f~~vi~~I~~A~~DP~V~sIk~t-lYr~~~d----------------s~Iv~ALi~A--A~rGv~V~vLvel~arfd-ee 413 (705)
T 2o8r_A 354 YDYVVRLLMEAAISPDVSEIRLT-QYRVAEN----------------SSIISALEAA--AQSGKKVSVFVELKARFD-EE 413 (705)
T ss_dssp SHHHHHHHHHHHTCTTEEEEEEE-ESCCCSC----------------CHHHHHHHHH--HHTTCEEEEEECCCSCC----
T ss_pred HHHHHHHHHHhccCCCceEEEEE-EEEEcCC----------------HHHHHHHHHH--HHCCCEEEEEEeCCCCcc-hh
Confidence 4679999999999 99975 4655432 2578888887 468999999998532110 00
Q ss_pred chhHHHHHHHHHhHhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCChhhhccccCcccc
Q 001122 918 AATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMI 997 (1149)
Q Consensus 918 ~s~~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~dYl~f~~L~~re~~~~~~~~~~~~~~~~n~~~~~~~~~r~~~i 997 (1149)
++ ..+.++|.++|+++.+. +. ..
T Consensus 414 ~n----------------i~wa~~Le~aGv~Vv~g---------~~--------------------------------~l 436 (705)
T 2o8r_A 414 NN----------------LRLSERMRRSGIRIVYS---------MP--------------------------------GL 436 (705)
T ss_dssp -C----------------HHHHHHHHHHTCEEEEC---------CT--------------------------------TC
T ss_pred hh----------------HHHHHHHHHCCCEEEEc---------cC--------------------------------CC
Confidence 11 13578899999998641 00 12
Q ss_pred eeeeEEEEEeCe---------EEEEcccCcccccCCCCCCcceEEEEeCcchh
Q 001122 998 YVHSKGMIVDDE---------YVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 998 YVHSKlmIVDD~---------~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
.+|+|++|||++ |+.+|+.|+|..+.. .-+++++...++..+
T Consensus 437 k~H~Ki~lIdrr~~~~g~~~~y~~igtGN~n~~tar--iy~D~~l~t~~~~i~ 487 (705)
T 2o8r_A 437 KVHAKTALILYHTPAGERPQGIALLSTGNFNETTAR--IYSDTTLMTANTDIV 487 (705)
T ss_dssp CBCCCEEEEEECCCSSSCCCEEEEEESSCSSCCCSS--CEEEEEEEECCHHHH
T ss_pred CceeEEEEEecccccCCceeEEEeccccceeeeEEE--EEeeeeeeecChHHH
Confidence 579999999987 788999999999997 789999999888653
No 66
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=94.88 E-value=0.0098 Score=67.83 Aligned_cols=35 Identities=11% Similarity=-0.066 Sum_probs=29.7
Q ss_pred EEEEeCeEEEEcccCc----ccccCCCCCCcceEEEEeCcch
Q 001122 1003 GMIVDDEYVILGSANI----NQRSMEGTRDTEIAMGAYQPEY 1040 (1149)
Q Consensus 1003 lmIVDD~~viIGSANi----N~RSm~G~~DsEiav~i~dp~~ 1040 (1149)
++|+|++++++|++|. +.||+. .+.| ++.+.|+.+
T Consensus 192 l~ivD~~~alv~~~~~~~~~~~rS~~--~~~e-aliv~~~~l 230 (342)
T 3qph_A 192 IGMTDGKEVVTIQNATFDSIGPPSFK--STYP-EIIFSQYSL 230 (342)
T ss_dssp EEEETTTEEEEECSSSCCSSCCCEEE--ECCH-HHHHHHHHH
T ss_pred EEEEECCEEEEecccccccccccccc--cccc-EEEEECHHH
Confidence 5999999999999998 349997 7888 888877764
No 67
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=94.16 E-value=0.077 Score=60.45 Aligned_cols=47 Identities=19% Similarity=0.126 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHhhcceEEEEEeccceeeEEeCCCCchHHHHHHHHHHHhhcCCcEEEEE
Q 001122 545 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLV 604 (1149)
Q Consensus 545 ~~f~al~eAI~~Ar~sI~I~~W~~~p~i~L~rd~~~~~g~~L~dlL~~kA~rGVkVrILv 604 (1149)
.....+.+.|.+|+++|++..|. ..-..+.+.|+++++|||+|++++
T Consensus 119 ~I~~ri~eli~~A~~eI~i~~~~-------------~~l~~l~~~L~~a~~RGV~Vrvi~ 165 (342)
T 3qph_A 119 EAIEMFRESLYSAKNEVIVVTPS-------------EFFETIREDLIKTLERGVTVSLYI 165 (342)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECH-------------HHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhhheEEEEEeCH-------------HHHHHHHHHHHHHHhCCCEEEEEE
Confidence 45789999999999999999872 123567789999999999999997
No 68
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=93.20 E-value=0.12 Score=55.85 Aligned_cols=50 Identities=18% Similarity=0.062 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHhhcceEEEEEeccceeeEEeCCCCchHHHHHHHHHHHhhcCCcEEEEEecC
Q 001122 545 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDD 607 (1149)
Q Consensus 545 ~~f~al~eAI~~Ar~sI~I~~W~~~p~i~L~rd~~~~~g~~L~dlL~~kA~rGVkVrILvwD~ 607 (1149)
...+.+.+.|++|+++|+|..|. ..-.+|.+.|++|++|||.|+|+++..
T Consensus 10 ~Ii~r~~e~I~~A~~el~lsi~~-------------e~l~~l~~~L~~A~~rGV~V~liv~~~ 59 (233)
T 2f5t_X 10 EAIEMFRESLYSAKNEVIVVTPS-------------EFFETIREDLIKTLERGVTVSLYIDKI 59 (233)
T ss_dssp HHHHHHHHHHHTCSSEEEEEECG-------------GGHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred HHHHHHHHHHHHhhhEEEEEeCH-------------HHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 45789999999999999998771 234789999999999999999999643
No 69
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=84.49 E-value=1.7 Score=46.71 Aligned_cols=40 Identities=18% Similarity=0.163 Sum_probs=34.9
Q ss_pred eeeeEEEEE---eCeEEEEcccCcccccCCCCCCcceEEEEeCcc
Q 001122 998 YVHSKGMIV---DDEYVILGSANINQRSMEGTRDTEIAMGAYQPE 1039 (1149)
Q Consensus 998 YVHSKlmIV---DD~~viIGSANiN~RSm~G~~DsEiav~i~dp~ 1039 (1149)
.+|+|+... |.+.+||||.||..--|. .|-|+++.+++..
T Consensus 103 i~HaK~Yg~~~n~g~~LIV~SgNfT~pGms--QNvE~sllld~~T 145 (358)
T 2c1l_A 103 ILHAKLYGTSNNLGESLVVSSGNFTGPGMS--QNIEASLLLDNNT 145 (358)
T ss_dssp CBCCEEEEEEETTEEEEEEESCCBSTTTTT--TSBEEEEEECHHH
T ss_pred ecchhhhcccCCCceEEEEecCCccccccc--cceeEEEEEcCCC
Confidence 589999876 468899999999999997 8999999997764
No 70
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=77.63 E-value=5.3 Score=51.19 Aligned_cols=70 Identities=11% Similarity=0.232 Sum_probs=48.5
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeeeCCCCCeeceEEEEEcc-
Q 001122 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAVVG---RTFVISNSEDPVWQQHFYVPVA- 419 (1149)
Q Consensus 346 ~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~~~~~~---rTkVi~nt~NPvWNE~F~f~v~- 419 (1149)
...|.|+|..+.++...+ . .+-||++.+ +++... .|+.+.-..+|.|||.+.|++.
T Consensus 216 ~~~f~i~i~~~~~~~~~~---~---------------~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i 277 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNADE---R---------------MKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISV 277 (940)
T ss_dssp CSEEEEEEEEEECCCC---------------------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEG
T ss_pred CCceEEEEEEecccCCCC---C---------------ceEEEEEEEEECCEEccCceecccccCCCCcccceEEEccccc
Confidence 346899999999986321 1 577888776 554332 4555555788999998777643
Q ss_pred -CC--CcEEEEEEEEcc
Q 001122 420 -HS--AAEVHFFVKDSD 433 (1149)
Q Consensus 420 -~~--~~~L~~~V~D~D 433 (1149)
+. .+.|.|+||+..
T Consensus 278 ~dLPr~a~L~~ti~~~~ 294 (940)
T 2wxf_A 278 CDLPRMARLCFALYAVV 294 (940)
T ss_dssp GGCCTTCEEEEEEEEEC
T ss_pred ccCCcccEEEEEEEEec
Confidence 22 488999999853
No 71
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=74.30 E-value=8.3 Score=38.92 Aligned_cols=97 Identities=14% Similarity=0.116 Sum_probs=68.2
Q ss_pred EEEEEECCEEEeeeeeeeCCCCCeeceEEEEEccCCC--------cEEEEEEEEccCCCCcceeeEEEeceeeccC-Cce
Q 001122 386 YVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSA--------AEVHFFVKDSDVVGSELIGTVAIPVEQIYSG-GKV 456 (1149)
Q Consensus 386 YV~V~l~~~~~~rTkVi~nt~NPvWNE~F~f~v~~~~--------~~L~~~V~D~D~~~ddfIG~a~IpL~~L~~G-~~~ 456 (1149)
||++.+-.-....|-++. +.+|.+|-+-++.|.... ..|.|++..-.-..-+.||++.|++.+|... ..+
T Consensus 45 F~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g~~~~tla~~~I~l~~lLe~~~~i 123 (156)
T 2yrb_A 45 FCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILEKSGRI 123 (156)
T ss_dssp EEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECSSCEEEEEEEEECCSHHHHCCSCE
T ss_pred EEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeCCCceEEEEEEEEhHHhhCcCCce
Confidence 555555454444666665 899999998888875442 4688888775433345899999999999843 446
Q ss_pred eeeeeecCCCCCCCCCCCcEEEEEEeec
Q 001122 457 EGTYPVLNGSGKPCKPGATLTLSIQYTP 484 (1149)
Q Consensus 457 ~~W~~L~~~~gk~~~~~g~L~L~l~f~p 484 (1149)
.+..+|.+.+|+. ..-|.|.+.|++..
T Consensus 124 ~g~~~L~g~~g~~-~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 124 FCTASLIGTKGDI-PNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEECBSSSCC-TTSEEEEEEEEEEE
T ss_pred EEEEEEEcCCCCc-ceEEEEEEEEEEec
Confidence 6778998887742 13569999988753
No 72
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=68.39 E-value=13 Score=48.17 Aligned_cols=89 Identities=15% Similarity=0.195 Sum_probs=55.5
Q ss_pred eeeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEEE---eeeeeeeCCCCCeeceEEEE
Q 001122 342 VLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAVV---GRTFVISNSEDPVWQQHFYV 416 (1149)
Q Consensus 342 ~~Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~~~~~---~rTkVi~nt~NPvWNE~F~f 416 (1149)
+|-+...+.|+|+.+.++.. +.... .+-||++.+ +++.. .+|+.+. ..+|.|||.+.|
T Consensus 350 lw~~~~~f~v~i~~~~~~n~-~~~~~---------------~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f 412 (1091)
T 3hhm_A 350 LWVINSALRIKILCATYVNV-NIRDI---------------DKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNY 412 (1091)
T ss_dssp GGGCCSEEEEEEEEESCCCC-CCSSC---------------CCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEE
T ss_pred hhhCCCCEEEEEEEecCCCC-Ccccc---------------ceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEe
Confidence 45566789999999998862 22111 577888887 33222 1444333 567889997777
Q ss_pred Ec--cCC--CcEEEEEEEEccCCC-----CcceeeEEEec
Q 001122 417 PV--AHS--AAEVHFFVKDSDVVG-----SELIGTVAIPV 447 (1149)
Q Consensus 417 ~v--~~~--~~~L~~~V~D~D~~~-----ddfIG~a~IpL 447 (1149)
++ .+. .+.|.|+|++....+ ...||-+.++|
T Consensus 413 ~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~l 452 (1091)
T 3hhm_A 413 DIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINL 452 (1091)
T ss_dssp EEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEES
T ss_pred cCccccCChhcEEEEEEEEecCccCcccccceeEEeeeee
Confidence 64 333 589999999865421 23566665554
No 73
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=65.46 E-value=10 Score=40.38 Aligned_cols=38 Identities=11% Similarity=0.308 Sum_probs=31.3
Q ss_pred eeeeeeeCCCCCeeceEEEEEccCC---CcEEEEEEEEccC
Q 001122 397 GRTFVISNSEDPVWQQHFYVPVAHS---AAEVHFFVKDSDV 434 (1149)
Q Consensus 397 ~rTkVi~nt~NPvWNE~F~f~v~~~---~~~L~~~V~D~D~ 434 (1149)
.+|.|...+.+|.|+|++.+.+... ...|.|++++...
T Consensus 79 ~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 79 YKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp EECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred EEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 3888888899999999999998644 3789999987554
No 74
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=57.86 E-value=37 Score=43.60 Aligned_cols=75 Identities=11% Similarity=0.051 Sum_probs=47.3
Q ss_pred eeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEEEe--eeeeeeCCCCCeeceEEEEEc
Q 001122 343 LLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAVVG--RTFVISNSEDPVWQQHFYVPV 418 (1149)
Q Consensus 343 ~Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~~~~~~--rTkVi~nt~NPvWNE~F~f~v 418 (1149)
|-+...++|+|..+....... ... ++-||++.+ +++... +|.-+.-+.+|.|||.+.|++
T Consensus 214 w~~~~~f~i~i~~~~~~~~~~-~~~---------------~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i 277 (961)
T 1e7u_A 214 WDCDRKFRVKIRGIDIPVLPR-TAD---------------LTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSI 277 (961)
T ss_dssp SCCCSEEEEEEEEEECSSCCT-TSC---------------EEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEE
T ss_pred eeccCceEEEEeecccccccC-CCC---------------ceEEEEEEEEECCEEcccceeeccccCCCcccceeEEecc
Confidence 445566899999886521011 011 577888765 555443 444444467899999877764
Q ss_pred --cCC--CcEEEEEEEEcc
Q 001122 419 --AHS--AAEVHFFVKDSD 433 (1149)
Q Consensus 419 --~~~--~~~L~~~V~D~D 433 (1149)
.+. .+.|.|+||+..
T Consensus 278 ~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 278 KIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp EGGGCCTTCEEEEEEEEEE
T ss_pred ccccCCcccEEEEEEEecc
Confidence 322 488999999754
No 75
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=51.87 E-value=10 Score=49.26 Aligned_cols=75 Identities=13% Similarity=0.178 Sum_probs=50.4
Q ss_pred ceeeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeeeCCCCCeeceEEE
Q 001122 341 KVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAVVG---RTFVISNSEDPVWQQHFY 415 (1149)
Q Consensus 341 ~~~Ll~GtL~VtVieAr~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~~~~~~---rTkVi~nt~NPvWNE~F~ 415 (1149)
.+|-+...+.|+|..+.++...+ . .+-||++.+ +++... +|+.+.-..+|.|||.+.
T Consensus 347 s~~~~~~~f~i~i~~~~~~~~~~---~---------------~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~ 408 (1092)
T 2y3a_A 347 HIWDNNNPFQITLVKGNKLNTEE---T---------------VKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLE 408 (1092)
T ss_dssp -CCCCCSEEEEEECCCCCCCCCS---S---------------CCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEE
T ss_pred ehhhcCCCEEEEEEEeccCCCCC---C---------------ceEEEEEEEEECCEEccCceecccccCCCCCccceeEE
Confidence 34566778999999999886321 1 566776554 555442 455444477899999877
Q ss_pred EEcc--CC--CcEEEEEEEEcc
Q 001122 416 VPVA--HS--AAEVHFFVKDSD 433 (1149)
Q Consensus 416 f~v~--~~--~~~L~~~V~D~D 433 (1149)
|++. +. .+.|.|+||+..
T Consensus 409 f~i~~~dLPr~a~L~~ti~~~~ 430 (1092)
T 2y3a_A 409 FDINICDLPRMARLCFAVYAVL 430 (1092)
T ss_dssp EEEESSSCCTTCEEEEECCCC-
T ss_pred eCCccccCChhcEEEEEEEEec
Confidence 7653 32 488999998854
No 76
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=42.70 E-value=33 Score=36.75 Aligned_cols=50 Identities=10% Similarity=0.095 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecC
Q 001122 840 MSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPM 909 (1149)
Q Consensus 840 ~sI~~ayl~aI~~Ar~~IYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~ai~a~rgv~V~IVlP~ 909 (1149)
..|.+-..++|++|++.|+| .++.. . -.++...|.+|. ++|+.|+|++..
T Consensus 9 e~Ii~r~~e~I~~A~~el~l----si~~e-------------~-l~~l~~~L~~A~--~rGV~V~liv~~ 58 (233)
T 2f5t_X 9 DEAIEMFRESLYSAKNEVIV----VTPSE-------------F-FETIREDLIKTL--ERGVTVSLYIDK 58 (233)
T ss_dssp HHHHHHHHHHHHTCSSEEEE----EECGG-------------G-HHHHHHHHHHHH--HTTCEEEEEESS
T ss_pred HHHHHHHHHHHHHhhhEEEE----EeCHH-------------H-HHHHHHHHHHHH--HCCCEEEEEEcC
Confidence 46888899999999999999 33322 1 134566666653 689999999975
No 77
>1q32_A TDP1P;, tyrosyl-DNA phosphodiesterase; DNA repair, replication, transcription, hydrolase, replication,transcription, hydrolase; 2.03A {Saccharomyces cerevisiae} SCOP: d.136.1.3 d.136.1.3
Probab=30.97 E-value=25 Score=42.24 Aligned_cols=42 Identities=29% Similarity=0.233 Sum_probs=30.1
Q ss_pred cccceeeeEEEEE---------e---C----eEEEEcccCcccccCC----CCCCcceEEEE
Q 001122 994 RFMIYVHSKGMIV---------D---D----EYVILGSANINQRSME----GTRDTEIAMGA 1035 (1149)
Q Consensus 994 ~~~iYVHSKlmIV---------D---D----~~viIGSANiN~RSm~----G~~DsEiav~i 1035 (1149)
|....-|.|++|- | | .|++||||||-.=.+. --++.||+|++
T Consensus 426 R~~a~PHiKty~r~~~~~~~~~~~~~~~~~i~W~lltSaNLSkaAWG~~~k~irnyElGVL~ 487 (544)
T 1q32_A 426 RGTTPAHSKFYMHCATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRNYEAGVLY 487 (544)
T ss_dssp TTTCCBCCEEEEEEEECC-------CTTSEESEEEEESCCBSHHHHCCSSSCCSSBEEEEEE
T ss_pred CCCccCceEEEEeeccccccccccCCCccceeEEEEccccCCHHHhhhhhccccceEeEEEe
Confidence 4467889999873 2 2 5899999999643221 01799999999
No 78
>1jy1_A TDP1, tyrosyl-DNA phosphodiesterase; PLD superfamily, hydrolase; 1.69A {Homo sapiens} SCOP: d.136.1.3 d.136.1.3 PDB: 1rff_A* 1mu9_A 1nop_A 1mu7_A* 1rfi_A* 1rg1_A* 1rg2_A* 1rgt_A* 1rgu_A* 1rh0_A* 1qzq_A
Probab=22.04 E-value=54 Score=38.64 Aligned_cols=49 Identities=22% Similarity=0.222 Sum_probs=0.0
Q ss_pred hhhccccCcccceeeeEEEEEeC------eEEEEcccCc----------ccccCCCCCCcceEEEE
Q 001122 986 EALSRKSGRFMIYVHSKGMIVDD------EYVILGSANI----------NQRSMEGTRDTEIAMGA 1035 (1149)
Q Consensus 986 ~~~~~~~r~~~iYVHSKlmIVDD------~~viIGSANi----------N~RSm~G~~DsEiav~i 1035 (1149)
+..+...+|....-|.|+.+-=+ .|++|||||| |...+.- ++.||+|++
T Consensus 335 ~w~~~~~~R~~a~pHiKty~r~~~~~~~~~W~lltSaNLSkaAWG~~~k~~~~l~I-~nyElGVl~ 399 (464)
T 1jy1_A 335 KWSAETSGRSNAMPHIKTYMRPSPDFSKIAWFLVTSANLSKAAWGALEKNGTQLMI-RSYELGVLF 399 (464)
T ss_dssp CCCCGGGTCTTSCBCCEEEEEECTTSSEEEEEEEESCCBSHHHHCEEETTTTEEEE-CSBEEEEEE
T ss_pred HhccCccCCCCcCCceeeEEecCCCCCeecEEEEccccCCHHHhCccccCCCceeE-eeeeeeEEE
Done!