Query 001126
Match_columns 1149
No_of_seqs 700 out of 3701
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 12:21:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001126.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001126hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1v0w_A Phospholipase D; hydrol 100.0 1.1E-35 3.7E-40 357.3 20.9 381 545-1041 66-476 (506)
2 3hsi_A Phosphatidylserine synt 100.0 6.6E-33 2.3E-37 328.3 22.3 353 512-1039 24-401 (458)
3 1djx_A PLC-D1, phosphoinositid 99.9 1E-25 3.6E-30 275.9 9.3 172 286-483 402-623 (624)
4 3qr0_A Phospholipase C-beta (P 99.9 3.8E-23 1.3E-27 257.9 9.8 166 286-484 555-771 (816)
5 3ohm_B 1-phosphatidylinositol- 99.9 1.7E-23 6E-28 262.1 6.7 166 286-484 630-845 (885)
6 2zkm_X 1-phosphatidylinositol- 99.9 3.2E-23 1.1E-27 259.7 6.4 165 286-483 583-798 (799)
7 1xdp_A Polyphosphate kinase; P 99.9 4.1E-21 1.4E-25 235.9 18.1 272 544-1041 346-633 (687)
8 2o8r_A Polyphosphate kinase; s 99.8 3.2E-21 1.1E-25 235.2 13.7 270 544-1041 351-639 (705)
9 2fk9_A Protein kinase C, ETA t 99.8 1.1E-20 3.7E-25 193.3 12.9 141 329-483 11-156 (157)
10 2dmh_A Myoferlin; beta-sandwic 99.8 7.9E-19 2.7E-23 174.5 15.5 124 345-487 5-136 (140)
11 2ep6_A MCTP2 protein; beta san 99.8 9.6E-19 3.3E-23 172.7 15.2 122 344-484 10-132 (133)
12 3b7y_A E3 ubiquitin-protein li 99.8 1.5E-18 5.2E-23 175.2 15.9 123 346-484 19-153 (153)
13 1wfj_A Putative elicitor-respo 99.8 4.6E-19 1.6E-23 175.3 11.2 125 344-488 7-134 (136)
14 3kwu_A MUNC13-1; calcium bindi 99.8 4.2E-18 1.4E-22 171.0 18.0 120 345-483 15-146 (148)
15 1gmi_A Protein kinase C, epsil 99.8 9.7E-19 3.3E-23 173.6 13.1 130 343-485 2-134 (136)
16 1rlw_A Phospholipase A2, CALB 99.8 2.7E-18 9.3E-23 167.4 11.2 118 346-484 2-125 (126)
17 3m7f_B E3 ubiquitin-protein li 99.7 1.4E-17 4.9E-22 172.4 15.8 124 346-485 7-142 (176)
18 3pyc_A E3 ubiquitin-protein li 99.7 4.2E-17 1.4E-21 160.7 14.9 120 347-482 5-131 (132)
19 2nq3_A Itchy homolog E3 ubiqui 99.7 3E-17 1E-21 170.3 13.2 127 343-487 32-164 (173)
20 2b3r_A Phosphatidylinositol-4- 99.7 3.8E-16 1.3E-20 154.9 13.3 105 344-464 17-130 (134)
21 1rsy_A Synaptotagmin I; calciu 99.7 3.7E-16 1.3E-20 157.9 12.4 105 345-464 40-150 (152)
22 2d8k_A Synaptotagmin VII; exoc 99.6 5.5E-16 1.9E-20 154.4 12.8 105 346-465 25-136 (141)
23 3fbk_A RGS3, RGP3, regulator o 99.6 2.7E-16 9.2E-21 159.2 10.6 108 344-467 24-140 (153)
24 3f04_A Synaptotagmin-1; C2A, c 99.6 2.9E-16 1E-20 156.6 10.5 104 345-463 32-141 (143)
25 4ggj_A Mitochondrial cardiolip 99.6 6E-16 2E-20 163.7 13.4 133 545-761 46-178 (196)
26 1rh8_A Piccolo protein; beta-s 99.6 1.6E-16 5.6E-21 158.1 8.5 109 343-466 14-140 (142)
27 1a25_A CALB, protein kinase C 99.6 5.5E-16 1.9E-20 156.0 12.1 106 344-465 28-140 (149)
28 2bwq_A Regulating synaptic mem 99.6 4.9E-16 1.7E-20 152.0 11.1 101 346-462 17-128 (129)
29 1v27_A Regulating synaptic mem 99.6 3.8E-16 1.3E-20 154.9 10.3 106 346-467 20-136 (141)
30 2q3x_A Regulating synaptic mem 99.6 4.2E-16 1.4E-20 161.0 10.4 106 345-465 28-140 (171)
31 3fdw_A Synaptotagmin-like prot 99.6 4.2E-16 1.5E-20 156.6 10.2 108 346-468 22-138 (148)
32 2z0u_A WW domain-containing pr 99.6 2.5E-16 8.6E-21 160.5 8.6 103 346-463 42-154 (155)
33 3rdl_A Protein kinase C alpha 99.6 8.2E-16 2.8E-20 151.8 11.9 105 345-465 14-125 (137)
34 2r83_A Synaptotagmin-1; C2A-C2 99.6 2E-15 6.9E-20 167.2 16.1 127 345-486 17-149 (284)
35 1wfm_A Synaptotagmin XIII; C2 99.6 1.3E-15 4.5E-20 151.6 12.9 102 346-465 25-133 (138)
36 2dmg_A KIAA1228 protein; beta- 99.6 8.6E-16 2.9E-20 153.0 11.0 107 346-468 23-139 (142)
37 2chd_A Rabphilin-3A, exophilin 99.6 1.5E-15 5E-20 151.4 11.2 105 345-464 27-140 (142)
38 1w15_A Synaptotagmin IV; metal 99.6 1.3E-15 4.5E-20 153.8 9.5 108 345-469 28-143 (153)
39 1ugk_A Synaptotagmin IV, KIAA1 99.6 3.6E-15 1.2E-19 147.9 12.4 105 345-464 20-133 (138)
40 3n5a_A Synaptotagmin-7; calciu 99.6 8.8E-16 3E-20 151.6 7.6 108 346-470 15-130 (138)
41 2cjt_A UNC-13 homolog A, MUNC1 99.6 4.7E-15 1.6E-19 146.9 12.2 116 346-482 4-130 (131)
42 2cm5_A Rabphilin-3A; protein t 99.6 7.9E-15 2.7E-19 150.3 13.0 106 346-468 36-149 (166)
43 1tjx_A Similar to synaptotagmi 99.6 7.6E-15 2.6E-19 149.2 12.6 91 345-450 23-121 (159)
44 2enp_A B/K protein; C2 type 1, 99.6 2.5E-15 8.7E-20 150.6 9.0 109 346-463 25-140 (147)
45 1byr_A Protein (endonuclease); 99.5 4.1E-14 1.4E-18 142.6 13.5 133 545-760 14-148 (155)
46 3l9b_A Otoferlin; C2-domain, b 99.5 3.2E-14 1.1E-18 141.6 11.9 116 348-486 22-142 (144)
47 1byr_A Protein (endonuclease); 99.5 6.8E-14 2.3E-18 141.0 12.2 119 841-1040 14-133 (155)
48 4gel_A Mitochondrial cardiolip 99.5 3.4E-14 1.2E-18 152.1 10.2 153 541-761 54-210 (220)
49 2cjs_A UNC-13 homolog A, MUNC1 99.5 4.6E-14 1.6E-18 145.7 10.6 116 347-483 14-140 (167)
50 1dqv_A Synaptotagmin III; beta 99.5 7.9E-14 2.7E-18 156.0 13.3 124 346-485 19-150 (296)
51 3jzy_A Intersectin 2; C2 domai 99.5 1.8E-13 6.2E-18 163.8 14.6 115 346-482 386-506 (510)
52 3bxj_A RAS GTPase-activating p 99.5 6.1E-15 2.1E-19 176.2 0.6 123 344-486 8-159 (483)
53 4ggj_A Mitochondrial cardiolip 99.5 1.2E-13 4.1E-18 146.1 10.3 118 841-1041 46-163 (196)
54 3nsj_A Perforin-1; pore formin 99.4 5.3E-13 1.8E-17 160.7 14.7 109 347-485 394-505 (540)
55 1cjy_A CPLA2, protein (cytosol 99.4 4.1E-13 1.4E-17 166.4 8.2 103 346-463 17-125 (749)
56 2r83_A Synaptotagmin-1; C2A-C2 99.4 3.9E-12 1.3E-16 140.8 14.4 90 346-450 149-246 (284)
57 1dqv_A Synaptotagmin III; beta 99.3 1.2E-12 4.3E-17 146.3 4.0 110 346-471 151-268 (296)
58 1xdp_A Polyphosphate kinase; P 99.1 1.1E-10 3.7E-15 143.8 12.1 119 844-1041 350-480 (687)
59 4gel_A Mitochondrial cardiolip 99.1 1.9E-10 6.3E-15 123.0 10.9 135 841-1041 58-195 (220)
60 3pfq_A PKC-B, PKC-beta, protei 99.1 1.7E-10 5.7E-15 143.3 10.6 107 344-466 169-282 (674)
61 1yrk_A NPKC-delta, protein kin 99.0 2.3E-09 7.8E-14 104.0 14.2 110 347-483 6-124 (126)
62 2enj_A NPKC-theta, protein kin 99.0 3.3E-09 1.1E-13 104.2 13.4 109 349-483 12-129 (138)
63 3hsi_A Phosphatidylserine synt 98.8 2E-08 6.8E-13 119.1 12.0 122 841-1024 37-165 (458)
64 1v0w_A Phospholipase D; hydrol 98.5 1.9E-07 6.6E-12 112.1 10.3 137 840-1039 65-208 (506)
65 2o8r_A Polyphosphate kinase; s 98.2 6E-06 2.1E-10 101.5 12.0 120 843-1041 354-487 (705)
66 3qph_A TRMB, A global transcri 95.3 0.0022 7.5E-08 73.2 -1.1 35 1003-1040 192-230 (342)
67 2f5t_X Archaeal transcriptiona 93.6 0.097 3.3E-06 56.5 6.9 50 545-607 10-59 (233)
68 3qph_A TRMB, A global transcri 93.3 0.24 8.1E-06 56.4 9.9 47 545-604 119-165 (342)
69 2wxf_A Phosphatidylinositol-4, 82.3 3.3 0.00011 53.0 9.9 71 345-433 215-294 (940)
70 2c1l_A Restriction endonucleas 79.8 3.6 0.00012 44.3 7.5 40 998-1039 103-145 (358)
71 2yrb_A Protein fantom; beta sa 78.5 6.9 0.00023 39.5 8.8 98 385-484 44-150 (156)
72 3hhm_A Phosphatidylinositol-4, 71.2 11 0.00036 48.9 10.0 90 342-448 350-453 (1091)
73 3l4c_A Dedicator of cytokinesi 69.0 8.3 0.00028 41.0 7.0 38 397-434 79-119 (220)
74 1e7u_A Phosphatidylinositol 3- 64.6 25 0.00085 45.2 11.4 76 342-433 213-296 (961)
75 2y3a_A Phosphatidylinositol-4, 60.6 6.6 0.00023 50.9 5.2 75 341-433 347-430 (1092)
76 2f5t_X Archaeal transcriptiona 45.4 28 0.00096 37.3 6.3 50 840-909 9-58 (233)
77 1q32_A TDP1P;, tyrosyl-DNA pho 32.8 22 0.00074 42.8 3.2 42 994-1035 426-487 (544)
No 1
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=100.00 E-value=1.1e-35 Score=357.31 Aligned_cols=381 Identities=15% Similarity=0.126 Sum_probs=204.4
Q ss_pred hHHHHHHHHHHHhccceEEEEeeccceeeEEeCCCCchHHHHHHHHHHHHhcC--CeEEEEEecCCCccccccccccccc
Q 001126 545 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEG--VRVLLLVWDDPTSRSILGYKMDGVM 622 (1149)
Q Consensus 545 ~~f~al~eAI~~Ak~sI~I~~W~~~p~i~L~r~~~~~~g~rL~dlL~~kA~rG--VkVrILVwD~~gs~~~~g~k~~g~m 622 (1149)
++|++|+++|++||++|+|++|.+ ++++ ..+.+|.++|++||+|| |+||||+ |+.++.....
T Consensus 66 ~~~~~l~~~I~~Ak~~I~i~~y~~------~~~d--~~g~~i~~aL~~aa~rGp~V~Vril~-D~~g~~~~~~------- 129 (506)
T 1v0w_A 66 RLLAKMTENIGNATRTVDISTLAP------FPNG--AFQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMNV------- 129 (506)
T ss_dssp HHHHHHHHHHHTCSSEEEEEEESS------CCCH--HHHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCCC-------
T ss_pred HHHHHHHHHHHHhccEEEEEEeec------cCCC--hHHHHHHHHHHHHHhCCCCcEEEEEE-eCcccccccc-------
Confidence 689999999999999999999963 1333 26789999999999999 9999997 6654321100
Q ss_pred ccccHHHHHHhccCCc------EEEEccCccccccccccccccccccccccceEEecCCCCCCCccEEEEEcccccCCCC
Q 001126 623 QTHDEETRRVFKHSSV------KVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGR 696 (1149)
Q Consensus 623 ~~~~~~t~~~l~~~gV------~v~l~p~~~~~~~~~~~~~~~~~~~rHHQKiVVVD~~~~~~~r~~vAFVGGiNL~dgR 696 (1149)
......+.|+..|+ .+.... |.. ....+.+||+|++|||++ +||+||+||++++
T Consensus 130 --~~~~~~~~L~~~g~~~~~~~~~~~~~--------~~~--~~~~~~r~H~K~~ViD~~--------~a~~Gg~Nl~~d~ 189 (506)
T 1v0w_A 130 --IPSKYRDELTAKLGKAAENITLNVAS--------MTT--SKTAFSWNHSKILVVDGQ--------SALTGGINSWKDD 189 (506)
T ss_dssp --HHHHHHHHHHHHHGGGGGGEEEEEEE--------ECS--BTTTTBCBCCCEEEETTT--------EEEEESCCCCHHH
T ss_pred --CCHHHHHHHHhcccceeecCcccccc--------ccc--cCCccccceeeEEEECCc--------EEEeeccccCccc
Confidence 01223334444333 332100 000 001134899999999997 9999999998766
Q ss_pred CCCCCCCccccccccCCCCCCCCccccCCCCCCCCCCeeeeeeEEcCHHHHHHHHHHHHHHHhhcCCC-CccccCCchhh
Q 001126 697 YDNPHHPLFRTLQTLHKDDYHNPTFTQGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKASKPH-GIKKLKSGDDA 775 (1149)
Q Consensus 697 wDt~~H~l~~~~~~~~~~Dy~np~~~~~~~~~~pr~PWHDv~vrI~GPaa~Dl~~~F~qrWn~~t~~~-~~~~l~~~~~~ 775 (1149)
|.+. ..+|||++++|+||+|.++.+.|.++|+...... .+..+. ....
T Consensus 190 y~~~------------------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~~~~~~~~~~~-~~~~ 238 (506)
T 1v0w_A 190 YLDT------------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTCQNKSNIASVW-FAAS 238 (506)
T ss_dssp HTSS------------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHHHTTTSTTTEE-EEES
T ss_pred cccC------------------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhccccCChhhhc-cccc
Confidence 6421 1379999999999999999999999999754210 000000 0000
Q ss_pred hhhhccCCCccCCCCCCCcccCCCCCcEEEEEeecCCCccccCCCChhh-----hcccccccC---c--c---cchhhHH
Q 001126 776 LLRIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKE-----ATSKNLVCG---K--N---VLIDMSI 842 (1149)
Q Consensus 776 l~~~~~~p~~~~~~~~p~~~~~~~~~~~vQvlRS~~~~s~~~~P~~p~~-----~~~~~l~~g---~--~---~~~e~sI 842 (1149)
. ..+..+.... ...|.. ....+...+|+............|..... +....++.+ + + ...+..|
T Consensus 239 ~-~~~~~~~~~~-~~~p~~-~~~~~~~~~~~~~~~~~~i~~~~P~~~~~~~~w~~~~~~~~~d~P~~~~~~~~~~~~~~~ 315 (506)
T 1v0w_A 239 G-NAGCMPTMHK-DTNPKA-SPATGNVPVIAVGGLGVGIKDVDPKSTFRPDLPTASDTKCVVGLHDNTNADRDYDTVNPE 315 (506)
T ss_dssp T-TCCCCTTHHH-HHSCSS-CCCCSSEEEEEEECCCSSSCSCCTTCCCCCCCCCCSSSCSSTTCCCTTTSCHHHHHHCHH
T ss_pred c-ccccCchhcc-ccCccc-CcccccccceecccccceeecCCccccccccCcccccceeeccccccccCcccccccccH
Confidence 0 0000000000 000000 01112233333322111111111110000 000000000 0 0 0013579
Q ss_pred HHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCCchhHH
Q 001126 843 HTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAATQR 922 (1149)
Q Consensus 843 ~~ayl~aI~~Ak~fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rgv~V~IVlP~~Peg~p~~~s~~~ 922 (1149)
.++|+++|.+||++|||++|||.+--.. ...+...++.+|.+|. ++||+|+||+|.+++..
T Consensus 316 ~~~~~~~I~~A~~~I~I~tq~~~pyf~p---------~~~~~~~i~~aL~~Aa--~rGV~VrIl~~~~~~~~-------- 376 (506)
T 1v0w_A 316 ESALRALVASAKGHIEISQQDLNATCPP---------LPRYDIRLYDALAAKM--AAGVKVRIVVSDPANRG-------- 376 (506)
T ss_dssp HHHHHHHHHTCSSEEEEEESCSSCCTTT---------SCSCCHHHHHHHHHHH--HTTCEEEEEECCGGGCC--------
T ss_pred HHHHHHHHhCcCcEEEEEeccccccccC---------cccchHHHHHHHHHHH--hCCCcEEEEeCCCCchH--------
Confidence 9999999999999999999666531100 0001235677777764 58999999999865221
Q ss_pred HHHHHHhh-hhhHHHH-----HHHHHHHcCCceeecc--cccccccccCCcccccccCCCCCCCCCCCCchhhhhcccCc
Q 001126 923 ILFWQHKT-MQMMYET-----IYKALVEVGLEGAFSP--QDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGR 994 (1149)
Q Consensus 923 il~~~~rT-m~~~~~s-----i~~~L~~~Gv~~~~~P--~~Yl~f~~Lr~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 994 (1149)
++.++... +..+.+. .-..|.+.|+.. ..+ ..-+.++.++.... +.. ...
T Consensus 377 ~~~~a~~~~~~~L~~~~~~l~~gv~ll~~g~~e-~~~~~~~~l~i~~~~~~~~---~~~------------------~~~ 434 (506)
T 1v0w_A 377 AVGSGGYSQIKSLSEISDTLRNRLANITGGQQA-AKTAMCSNLQLATFRSSPN---GKW------------------ADG 434 (506)
T ss_dssp ------CCCCSCTHHHHHHHHHHHHHHHTSHHH-HHHHHHHHEEEEECCSSSS---SSC------------------TTS
T ss_pred HHHHhHHHHHHHHHHhhhhhcccchhcccccch-hccccccceeeeeccccCc---ccc------------------ccC
Confidence 11111110 0000000 011233333200 000 00001111110000 000 001
Q ss_pred ccceeeeEEEEEeCeEEEEcccccccCCCCCCCCcceEEEEeCcchh
Q 001126 995 FMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 995 ~~iYVHSKlmIVDD~~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
...++|+|+|||||++++|||+|||.||| +|++++|+|++++
T Consensus 435 ~~~~lHaK~~vvD~~~~~vGS~N~d~rS~-----~E~~l~i~~~~~a 476 (506)
T 1v0w_A 435 HPYAQHHKLVSVDSSTFYIGSKNLYPSWL-----QDFGYIVESPEAA 476 (506)
T ss_dssp CCCCBCCEEEEETTTEEEEESCCSSCCCS-----BCEEEEEECHHHH
T ss_pred ccccceEEEEEECCcEEEEeCCCCCCcch-----hhceeEecCHHHH
Confidence 14689999999999999999999999999 3999999998754
No 2
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=100.00 E-value=6.6e-33 Score=328.30 Aligned_cols=353 Identities=15% Similarity=0.083 Sum_probs=213.8
Q ss_pred ccCCeeEecccccCCCCCCCcccccCCCccchhhHHHHHHHHHHHhccceEEEEeeccceeeEEeCCCCchHHHHHHHHH
Q 001126 512 RKGGKVTLYQDAHVPDGCLPHLGLDRGMSYVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLR 591 (1149)
Q Consensus 512 ~~Gn~V~ly~dg~~~~~~~~~i~l~~g~~y~~~~~f~al~eAI~~Ak~sI~I~~W~~~p~i~L~r~~~~~~g~rL~dlL~ 591 (1149)
..||+|++|.+|+ ++|++++++|++||++|+|++|.| .++ ..+..|.++|+
T Consensus 24 ~~~n~v~~l~~g~--------------------~~~~~l~~~I~~A~~~I~i~~~~~-------~~d--~~g~~l~~aL~ 74 (458)
T 3hsi_A 24 LQAEQIEFLGSSA--------------------EFKTQIIELIRNAKKRIYVTALYW-------QKD--EAGQEILDEIY 74 (458)
T ss_dssp CCGGGEEECCCHH--------------------HHHHHHHHHHHTCSSEEEEEESCB-------CSS--HHHHHHHHHHH
T ss_pred ccCCeEEEEeCHH--------------------HHHHHHHHHHHhcCCEEEEEEEEE-------ecC--cHHHHHHHHHH
Confidence 3589999999996 789999999999999999999955 344 37889999999
Q ss_pred HHHhc--CCeEEEEEecCCC-cccccccccccccccc-cHHHHHHhc--cCCcEEE--Ecc-Cccccccccccccccccc
Q 001126 592 SKSQE--GVRVLLLVWDDPT-SRSILGYKMDGVMQTH-DEETRRVFK--HSSVKVL--LCP-RIAGKRHSWAKQKEVGTI 662 (1149)
Q Consensus 592 ~kA~r--GVkVrILVwD~~g-s~~~~g~k~~g~m~~~-~~~t~~~l~--~~gV~v~--l~p-~~~~~~~~~~~~~~~~~~ 662 (1149)
+||+| ||+||||+ |+.. .+...| ..... .......|. +++|+|. ++. +.. + ...+
T Consensus 75 ~aa~r~~GV~Vril~-D~~~~~r~~~g-----~~~~~~~~~~~~~L~~~g~nv~v~~~~f~~p~~-----~-----~~~~ 138 (458)
T 3hsi_A 75 RVKQENPHLDVKVLI-DWHRAQRNLLG-----AEKSATNADWYCEQRQTYQLPDDPNMFFGVPIN-----T-----REVF 138 (458)
T ss_dssp HHHHHSTTCEEEEEE-ETTGGGSCCC----------CCHHHHHHHHHHHHTCTTCCCCEEEECSS-----S-----SGGG
T ss_pred HHHhcCCCCEEEEEE-ECccccccccc-----cccccccHHHHHHHHhhCCCceEeeeecCCccc-----c-----cccc
Confidence 99999 99999996 7631 111111 00000 112223332 3337776 653 210 1 1246
Q ss_pred cccccceEEecCCCCCCCccEEEEEcccccCCCCCCCCCCCccccccccCCCCCCCCccccCCCCCCCCCCeeeeeeEEc
Q 001126 663 YTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPLFRTLQTLHKDDYHNPTFTQGNTTGCPREPWHDLHSKID 742 (1149)
Q Consensus 663 ~rHHQKiVVVD~~~~~~~r~~vAFVGGiNL~dgRwDt~~H~l~~~~~~~~~~Dy~np~~~~~~~~~~pr~PWHDv~vrI~ 742 (1149)
.++|+|++|||++ + ++||+||+++|+... + ....|+| +.|.
T Consensus 139 ~r~H~Ki~viD~~--------v-~~~G~Ni~d~y~~~~------------------~----------~~~~drd--~~i~ 179 (458)
T 3hsi_A 139 GVLHVKGFVFDDT--------V-LYSGASINNVYLHQF------------------E----------KYRYDRY--QKIT 179 (458)
T ss_dssp CCEECCEEEETTE--------E-EEESCCBSTTTTTCS------------------S----------CCEECCE--EEEE
T ss_pred CcceeeEEEECCC--------E-EEEeeecCHHHhcCC------------------c----------ccCcchh--hhhc
Confidence 7899999999995 7 556699999766321 0 1135778 4489
Q ss_pred CHHHHHHHHHHH--HHHHhhcCCCCcccc--CC---chhhhhhh-ccCCCccCCCCCCCcccCCCCCcEEEEEeecCCCc
Q 001126 743 GPAAYDVLTNFE--ERWRKASKPHGIKKL--KS---GDDALLRI-ERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTS 814 (1149)
Q Consensus 743 GPaa~Dl~~~F~--qrWn~~t~~~~~~~l--~~---~~~~l~~~-~~~p~~~~~~~~p~~~~~~~~~~~vQvlRS~~~~s 814 (1149)
||.+.|....|. ..|+...-.. ...+ .. +....... +..+...... .+. ...+...+++.....
T Consensus 180 g~~~~D~~~~~~~~~~~~g~~v~~-l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~---~~~~~~~~~v~p~~~--- 251 (458)
T 3hsi_A 180 HAELADSMVNFINDYLLDFSAVYP-LDVTNRPRTKEIRGNIRAYRKDLAQNGEYS-LKS---AVKLPNVLSVSPLFG--- 251 (458)
T ss_dssp CHHHHHHHHHHHHHTTCCTTTCEE-SSSSCCCCGGGTHHHHHHHHHHHHHHCCCC-CSS---CBSSCSSCEEEEEEE---
T ss_pred CchHHHHHHHHHHhhhhcCccchh-hHHHhcccchhhHHHHHHHHHhhhhccccc-ccc---cCCCCceEEEecCCC---
Confidence 999999999994 4465322100 0000 00 00000000 0000000000 000 000011123322100
Q ss_pred cccCCCChhhhcccccccCcccchhhHHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHH
Q 001126 815 VRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADK 894 (1149)
Q Consensus 815 ~~~~P~~p~~~~~~~l~~g~~~~~e~sI~~ayl~aI~~Ak~fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~a 894 (1149)
| +. .+..|..+|+++|.+|++.|||+++||+++. .+..+|..|
T Consensus 252 ----~-------------~~---~~~~i~~~~~~lI~~A~~~I~I~tpYf~p~~-----------------~~~~aL~~A 294 (458)
T 3hsi_A 252 ----L-------------GA---SGNELNQVIEDLFLQVQKKLVICTPYFNFPR-----------------TLQHKIATL 294 (458)
T ss_dssp ----E-------------SS---SSCHHHHHHHHHHHTCSSEEEEECSSSCCCH-----------------HHHHHHHHH
T ss_pred ----C-------------CC---chhHHHHHHHHHHHhcccEEEEEEeccCCCH-----------------HHHHHHHHH
Confidence 0 00 1247899999999999999999999999864 466666665
Q ss_pred HHcCCCcEEEEEecCCCCCCCCCchhHHHHHHHHhhh--hhHHHHH---HHHHHHcC---CceeecccccccccccCCcc
Q 001126 895 IRAHERFAAYIVIPMWPEGVPTGAATQRILFWQHKTM--QMMYETI---YKALVEVG---LEGAFSPQDYLNFFCLGNRE 966 (1149)
Q Consensus 895 ira~rgv~V~IVlP~~Peg~p~~~s~~~il~~~~rTm--~~~~~si---~~~L~~~G---v~~~~~P~~Yl~f~~Lr~r~ 966 (1149)
+++||+|+||+|...........+++++.+..... ....+.+ ++.|.++| ++++. |
T Consensus 295 --a~rGV~VrIi~~~~~and~y~~~~~~~~~~~~~~~lye~~~~~f~~~~~~l~~~G~i~V~i~~----~---------- 358 (458)
T 3hsi_A 295 --LENGKRVEIIVGDKVANDFYIPPEQPFKMAGALPYLYESNLRRFCEKFETQIESGQLVVRLWR----D---------- 358 (458)
T ss_dssp --HTTTCEEEEEEECGGGSTTCCCTTSCCCGGGGHHHHHHHHHHHHHHHTHHHHHHTSEEEEEEC----B----------
T ss_pred --HHCCCeEEEEECCccccCCccCCcchhhhhcchHHHHHHhhhhhHHHHHHHHhCCCeEEEEEe----c----------
Confidence 47999999999985311100011122222222110 0000111 34677788 54431 0
Q ss_pred cccccCCCCCCCCCCCCchhhhhcccCcccceeeeEEEEEeCeEEEEcccccccCCCCCCCCcceEEEEeCcc
Q 001126 967 VIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPE 1039 (1149)
Q Consensus 967 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~iYVHSKlmIVDD~~viIGSANiN~RSm~G~~DsEiav~i~dp~ 1039 (1149)
...++|+|+|||||++++|||+|||.||+. +|+|++++|+|++
T Consensus 359 ----------------------------~~~~lHaK~~vvD~~~~~vGS~N~d~RS~~--lN~E~~~~i~~~~ 401 (458)
T 3hsi_A 359 ----------------------------GDNTYHLKGVWVDDRYILLTGNNLNPRAWR--LDAENGLLIYDPQ 401 (458)
T ss_dssp ----------------------------TTBEECCCEEEETTTEEEEECCCCSHHHHH--TCEEEEEEEECTT
T ss_pred ----------------------------CCCceeEEEEEECCeEEEecCCCCCcchhh--hCceeEEEEeCCc
Confidence 135899999999999999999999999998 9999999999986
No 3
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.92 E-value=1e-25 Score=275.94 Aligned_cols=172 Identities=27% Similarity=0.320 Sum_probs=147.7
Q ss_pred CCCCCcccCCCCCcc-cCccccCCCCcCCCCCCcccCCCCCCCCCcccccC--CCCCcceeee-----------------
Q 001126 286 SSPGGFYGYPNDSFS-SYPERAYLGMIDSSNHLVYAHSDSFNGQNMQIVPS--TKGSLKVLLL----------------- 345 (1149)
Q Consensus 286 ~~~~~~~~~~~~~~~-~~~~~~~~~r~~ssn~~p~~~~~~~~~~g~q~Va~--q~~~~~~~Ll----------------- 345 (1149)
..+.+|+.||.++|+ +| |+|.|+|||||+|+.+|. +||||||+ |+.++.++|.
T Consensus 402 ~~~~~~~~~n~~~l~RvY---P~g~R~~SSN~~P~~~W~----~G~QmvAlN~Qt~d~~m~ln~g~F~~ng~~GYvlKP~ 474 (624)
T 1djx_A 402 ESGNGFVRHNVSCLSRIY---PAGWRTDSSNYSPVEMWN----GGCQIVALNFQTPGPEMDVYLGCFQDNGGCGYVLKPA 474 (624)
T ss_dssp HHHHHHHHHHHHSCEEEE---CCTTCTTCCCCCSHHHHT----TTCCEEEECTTCCSHHHHHHHHHHHSGGGCSEEECCG
T ss_pred HhHHHHHHHhhhcceeec---cCCccCCCCCCCchHHhh----ccceeeeecccCCchHHhHHHHHhhcCCCCccEECCH
Confidence 446789999999999 99 999999999999998877 99999999 8888755332
Q ss_pred ---------------------ceEEEEEEEEeeCCCCCCC--CCccccccccccCCCCCCCCcEEEEEECC----EEEee
Q 001126 346 ---------------------HGNLDIWIYSAKNLPNMDM--FHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGR 398 (1149)
Q Consensus 346 ---------------------hGtL~VtVieAk~L~~~D~--~g~~~~~~~~k~~~~~~~sDPYV~V~l~g----~~~~r 398 (1149)
.++|+|+|++|++|+.+|. .+. +||||+|.+.+ ...+|
T Consensus 475 ~lr~~~~~f~p~~~~~~~~~~~~~L~V~Vi~A~~L~~~d~~~~~~---------------~DPYV~V~l~g~~~d~~~~k 539 (624)
T 1djx_A 475 FLRDPNTTFNSRALTQGPWWRPERLRVRIISGQQLPKVNKNKNSI---------------VDPKVIVEIHGVGRDTGSRQ 539 (624)
T ss_dssp GGGCTTCCCCTTSCCSSTTCCCEEEEEEEEEEESCCCCSSCSSSC---------------CCEEEEEEEESSGGGCEEEE
T ss_pred HHcCCCCCcCcccccccCCccceEEEEEEEEcCCCCcccccccCC---------------CCcEEEEEEecCCCCcceee
Confidence 3479999999999998874 343 89999999965 23469
Q ss_pred eeeecCC-CCCeeceEEEEEccCCC-ceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCCCCCCCCCce
Q 001126 399 TFVISNS-EDPVWQQHFYVPVAHSA-AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGAT 475 (1149)
Q Consensus 399 TkVi~nt-~nPvWNE~F~f~v~~~~-~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~~~g~ 475 (1149)
|++++++ +||+|||+|.|.+..+. +.|+|+|||+|.. ++++||+++|||.+|..|. +|++|.+.+|++.. .+.
T Consensus 540 Tkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~~-~~~ 615 (624)
T 1djx_A 540 TAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQHP-SAT 615 (624)
T ss_dssp CCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEEE-EEE
T ss_pred cccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCCC-ceE
Confidence 9999997 99999999999998764 7899999999985 6899999999999999874 69999999998753 468
Q ss_pred eEEEEEee
Q 001126 476 LTLSIQYT 483 (1149)
Q Consensus 476 L~L~L~f~ 483 (1149)
|.|.++|.
T Consensus 616 L~v~i~~~ 623 (624)
T 1djx_A 616 LFVKISIQ 623 (624)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 88888875
No 4
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.88 E-value=3.8e-23 Score=257.89 Aligned_cols=166 Identities=24% Similarity=0.327 Sum_probs=139.6
Q ss_pred CCCCCcccCCCCCcc-cCccccCCCCcCCCCCCcccCCCCCCCCCcccccC--CCCCcceeeec----------------
Q 001126 286 SSPGGFYGYPNDSFS-SYPERAYLGMIDSSNHLVYAHSDSFNGQNMQIVPS--TKGSLKVLLLH---------------- 346 (1149)
Q Consensus 286 ~~~~~~~~~~~~~~~-~~~~~~~~~r~~ssn~~p~~~~~~~~~~g~q~Va~--q~~~~~~~Llh---------------- 346 (1149)
..+.+|+.||.++|+ +| |+|.|+|||||+|+.+|. +||||||+ |+.++.++|.+
T Consensus 555 ~~~~~~v~~n~~~l~RvY---P~g~RidSSNy~P~~~W~----~G~QmVALN~QT~d~~m~LN~g~F~~nG~cGYVLKP~ 627 (816)
T 3qr0_A 555 DNPEDFVDYNKKQITRIY---PKGTRVDSSNYVPQIYWN----AGCQLVALNFQCFDIAMCVNLGVFEYNGCSGYLLKPE 627 (816)
T ss_dssp HCHHHHHHHTTTSCEEEE---CCTTCTTCCCCCTHHHHT----TTCSEECBCTTCCSHHHHHHHHHTTTTTTCSEEECCH
T ss_pred hhhHHHHHhhhcccceeC---CCccccCCCCCCchhhcc----cCceEEeecCcCCChhhhhhhhhhccCCceeeeecCh
Confidence 456789999999999 99 999999999999998888 99999999 98887554433
Q ss_pred ----------------------eEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCE------EEee
Q 001126 347 ----------------------GNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGA------VVGR 398 (1149)
Q Consensus 347 ----------------------GtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~------~~~r 398 (1149)
++|+|+|++|++|+.. . +||||+|.|.+. ...|
T Consensus 628 ~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~~----~---------------~DPYV~V~l~g~p~d~~~~k~k 688 (816)
T 3qr0_A 628 FMRKLDKRFDPFTESTVDGVVAGTIEIKIISAQFLSDK----Q---------------ISSYVEVEMYGLPTDTVRKKFK 688 (816)
T ss_dssp HHHCTTCCCCTTCCSCCTTSCCEEEEEEEEEEECCCSS----C---------------CCEEEEEEEESSGGGCEEEEEE
T ss_pred HhcCCCcccCCCCCCCcCCccceEEEEEEEEcccCCCC----C---------------CCCeEEEEEeCCCcccccceee
Confidence 3699999999999742 2 799999999751 3359
Q ss_pred eeeecC-CCCCeeceE-EEEE-ccCCC-ceEEEEEEEccCCCCcceeeEEEeceeeccCCceeeeEeeccCCCCCCCCCc
Q 001126 399 TFVISN-SEDPVWQQH-FYVP-VAHSA-AEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGA 474 (1149)
Q Consensus 399 TkVi~n-t~nPvWNE~-F~f~-v~~~~-~~L~~~V~D~D~~~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~~~g 474 (1149)
|+|+.+ ++||+|||+ |.|. +..+. +.|+|+|+|++ ++|||+++|||++|..|. ++++|.+.+|++.. .+
T Consensus 689 Tkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d---ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~-~a 761 (816)
T 3qr0_A 689 TKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN---GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLG-LA 761 (816)
T ss_dssp CCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT---SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEE-EE
T ss_pred eEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC---CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCC-ce
Confidence 999986 699999998 9998 76554 78999999985 899999999999999885 67999999999764 35
Q ss_pred eeEEEEEeec
Q 001126 475 TLTLSIQYTP 484 (1149)
Q Consensus 475 ~L~L~L~f~p 484 (1149)
.|.+.+.+..
T Consensus 762 tLfv~i~~~~ 771 (816)
T 3qr0_A 762 SVFAHIVAKD 771 (816)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEe
Confidence 7777777654
No 5
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.88 E-value=1.7e-23 Score=262.11 Aligned_cols=166 Identities=24% Similarity=0.290 Sum_probs=140.2
Q ss_pred CCCCCcccCCCCCcc-cCccccCCCCcCCCCCCcccCCCCCCCCCcccccC--CCCCcceeeece---------------
Q 001126 286 SSPGGFYGYPNDSFS-SYPERAYLGMIDSSNHLVYAHSDSFNGQNMQIVPS--TKGSLKVLLLHG--------------- 347 (1149)
Q Consensus 286 ~~~~~~~~~~~~~~~-~~~~~~~~~r~~ssn~~p~~~~~~~~~~g~q~Va~--q~~~~~~~LlhG--------------- 347 (1149)
..+.+|+.||.++|+ +| |+|.|+|||||+|+.+|. +||||||+ |+.++.++|.+|
T Consensus 630 ~~~~~~~~~n~~~l~RvY---P~g~RidSSNy~P~~~W~----~G~QmVALN~QT~d~~m~lN~g~F~~nG~cGYVLKP~ 702 (885)
T 3ohm_B 630 KSPMEFVEYNKQQLSRIY---PKGTRVDSSNYMPQLFWN----VGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKPE 702 (885)
T ss_dssp HSHHHHHHHHHHSCEEEE---CCTTCTTCCCCCTHHHHT----TTCSEECBCTTCCSHHHHHHHHHHTTGGGCSEEECCG
T ss_pred hCHHHHHHHhhccceeec---cCccccCCCCCCchhhcc----cCceeeeecCCCCCcccchhhhhhccCCceeeeecCH
Confidence 456789999999999 99 999999999999998887 99999999 998886655443
Q ss_pred -----------------------EEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC-----EEEeee
Q 001126 348 -----------------------NLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG-----AVVGRT 399 (1149)
Q Consensus 348 -----------------------tL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g-----~~~~rT 399 (1149)
+|+|+|++|++|+.. . +||||+|.|.+ ....||
T Consensus 703 ~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visaq~L~~~----~---------------~DPYV~V~l~g~p~D~~~k~kT 763 (885)
T 3ohm_B 703 FMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSDR----K---------------VGIYVEVDMFGLPVDTRRKYRT 763 (885)
T ss_dssp GGTCTTCCCCTTCSSCCTTCCCEEEEEEEEEEESCCSS----C---------------CCEEEEEEEESSTTTCBCCCCC
T ss_pred HHcCCCcCcCCCcCcccCcccceEEEEEEEEeccCccc----C---------------CCcEEEEEEeCCCcccccceee
Confidence 699999999999841 2 79999999965 123599
Q ss_pred eeecC-CCCCeece-EEEEE-ccCCC-ceEEEEEEEccCCCCcceeeEEEeceeeccCCceeeeEeeccCCCCCCCCCce
Q 001126 400 FVISN-SEDPVWQQ-HFYVP-VAHSA-AEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGAT 475 (1149)
Q Consensus 400 kVi~n-t~nPvWNE-~F~f~-v~~~~-~~L~~~V~D~D~~~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~~~g~ 475 (1149)
+|+.+ ++||+||| +|.|. |..+. +.|+|+|||+| ++|||+++|||..|..|. ++++|.+.+|++.. .+.
T Consensus 764 kvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d---ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l~-~at 836 (885)
T 3ohm_B 764 RTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG---GKFVGHRILPVSAIRSGY---HYVCLRNEANQPLC-LPA 836 (885)
T ss_dssp CCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT---TEEEEEEEEETTTCCCEE---EEEEEECTTSCEEE-EEE
T ss_pred EEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC---ccEEeeEEEEHHHcCCCc---eEEEecCCCCCccC-ceE
Confidence 99986 69999999 69998 65553 78999999987 899999999999999885 57999999998753 458
Q ss_pred eEEEEEeec
Q 001126 476 LTLSIQYTP 484 (1149)
Q Consensus 476 L~L~L~f~p 484 (1149)
|.|.+.+..
T Consensus 837 Lfv~i~~~~ 845 (885)
T 3ohm_B 837 LLIYTEASD 845 (885)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 888888653
No 6
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.87 E-value=3.2e-23 Score=259.73 Aligned_cols=165 Identities=22% Similarity=0.271 Sum_probs=138.8
Q ss_pred CCCCCcccCCCCCcc-cCccccCCCCcCCCCCCcccCCCCCCCCCcccccC--CCCCcceeeece---------------
Q 001126 286 SSPGGFYGYPNDSFS-SYPERAYLGMIDSSNHLVYAHSDSFNGQNMQIVPS--TKGSLKVLLLHG--------------- 347 (1149)
Q Consensus 286 ~~~~~~~~~~~~~~~-~~~~~~~~~r~~ssn~~p~~~~~~~~~~g~q~Va~--q~~~~~~~LlhG--------------- 347 (1149)
..+.+|+.||.++|+ +| |+|.|+|||||+|+.+|. +||||||+ |+.++.++|.+|
T Consensus 583 ~~~~~~~~~n~~~l~RvY---P~g~R~~SSN~~P~~~W~----~G~QmVAlN~Qt~d~~m~ln~g~F~~nG~cGYVlKP~ 655 (799)
T 2zkm_X 583 KASVQFVDYNKRQMSRIY---PKGTRMDSSNYMPQMFWN----AGCQMVALNFQTMDLPMQQNMAVFEFNGQSGYLLKHE 655 (799)
T ss_dssp HSHHHHHHHHHHSEEEEE---CCTTCTTCCCCCSHHHHH----TTCSEECBCTTCCSHHHHHHHHHTTTGGGCSEEECCG
T ss_pred HCHHHHHHHhhhcceeec---cCCCcCCCCCCCcHHHHh----ccceEeeeccccCchHHHHHHhhhhccCCCCceECCH
Confidence 456789999999999 99 999999999999997777 99999999 998886655433
Q ss_pred -----------------------EEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC-----EEEeee
Q 001126 348 -----------------------NLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG-----AVVGRT 399 (1149)
Q Consensus 348 -----------------------tL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g-----~~~~rT 399 (1149)
+|+|+|++|++|+. +. +||||+|.+.+ .+..||
T Consensus 656 ~lr~~~~~f~p~~~~~~~~~~~~~L~V~Visa~~L~~----~~---------------~DPYV~V~l~g~p~d~~~k~kT 716 (799)
T 2zkm_X 656 FMRRPDKQFNPFSVDRIDVVVATTLSITVISGQFLSE----RS---------------VRTYVEVELFGLPGDPKRRYRT 716 (799)
T ss_dssp GGTCTTSCCCTTSCCTTTTTTCEEEEEEEEEEESCCS----SC---------------CCEEEEEEEECCTTSCCCCEEC
T ss_pred HHhCCCccCCCcccccccceeeeeEEEEEEeccccCc----cC---------------CCcEEEEEEEecCCCcccceee
Confidence 79999999999984 22 89999999954 123599
Q ss_pred e-eecC-CCCCeece-EEEE-EccCCC-ceEEEEEEEccCCCCcceeeEEEeceeeccCCceeeeEeeccCCCCCCCCCc
Q 001126 400 F-VISN-SEDPVWQQ-HFYV-PVAHSA-AEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGA 474 (1149)
Q Consensus 400 k-Vi~n-t~nPvWNE-~F~f-~v~~~~-~~L~~~V~D~D~~~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~~~g 474 (1149)
+ |+++ ++||+||| +|.| .|..+. +.|+|+|+|+| +++||+++|||++|..|. +|++|.+..|++.. .+
T Consensus 717 k~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d---~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~~-~~ 789 (799)
T 2zkm_X 717 KLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG---NKFLGHRIIPINALNSGY---HHLCLHSESNMPLT-MP 789 (799)
T ss_dssp CCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT---TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEEE-EE
T ss_pred cccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC---CCccceEeeehhhcCCCc---EEEeccCCCCCCCC-ce
Confidence 9 8865 69999999 6999 776554 68999999987 899999999999999874 68999998888664 45
Q ss_pred eeEEEEEee
Q 001126 475 TLTLSIQYT 483 (1149)
Q Consensus 475 ~L~L~L~f~ 483 (1149)
.|.|.+++.
T Consensus 790 ~Lfv~i~~~ 798 (799)
T 2zkm_X 790 ALFIFLEMK 798 (799)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEE
Confidence 777877764
No 7
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.85 E-value=4.1e-21 Score=235.87 Aligned_cols=272 Identities=13% Similarity=0.100 Sum_probs=182.1
Q ss_pred hhHHHHHHHHHHHhcc-----ceEEEEeeccceeeEEeCCCCchHHHHHHHHHHHHhcCCeEEEEEecCCCccccccccc
Q 001126 544 GKCWYDICNAISQAQR-----LIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKM 618 (1149)
Q Consensus 544 ~~~f~al~eAI~~Ak~-----sI~I~~W~~~p~i~L~r~~~~~~g~rL~dlL~~kA~rGVkVrILVwD~~gs~~~~g~k~ 618 (1149)
.+.|+.+++.|++|++ +|+|+.|.+. ++ ..|.++|++||++||+|+||+ |..+....
T Consensus 346 ~~sf~~v~~~I~~A~~dp~v~~I~it~Y~~~-------~d-----~~I~~AL~~AA~rGV~VrVLv-d~~a~~~~----- 407 (687)
T 1xdp_A 346 YHTFEHVLELLRQASFDPSVLAIKINIYRVA-------KD-----SRIIDSMIHAAHNGKKVTVVV-ELQARFDE----- 407 (687)
T ss_dssp TBCTHHHHHHHHHHHHCTTEEEEEEEESSCC-------TT-----CHHHHHHHHHHHTTCEEEEEE-CTTCSSTT-----
T ss_pred hhhhhhHHHHHHHHhhCCcceEEEEEeeeec-------Cc-----HHHHHHHHHHHhcCCEEEEEE-CCCcccch-----
Confidence 3578999999999997 9999888542 22 589999999999999999997 76552110
Q ss_pred ccccccccHHHHHHhccCCcEEEEccCccccccccccccccccccccccceEEecCCCCCCCccEEEEEcccccCCCCCC
Q 001126 619 DGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYD 698 (1149)
Q Consensus 619 ~g~m~~~~~~t~~~l~~~gV~v~l~p~~~~~~~~~~~~~~~~~~~rHHQKiVVVD~~~~~~~r~~vAFVGGiNL~dgRwD 698 (1149)
.....+.+.|..+||+|..+.+ .++.|.|++|||++.++ .-+..||+||.|+....+
T Consensus 408 -----~~n~~~~~~L~~aGV~V~~~~~----------------~~k~H~Ki~VID~re~~-~i~~~a~iGS~N~d~rs~- 464 (687)
T 1xdp_A 408 -----EANIHWAKRLTEAGVHVIFSAP----------------GLKIHAKLFLISRKENG-EVVRYAHIGTGNFNEKTA- 464 (687)
T ss_dssp -----TTTTTTTHHHHHHTCEEEECCT----------------TCEECCEEEEEEEEETT-EEEEEEEEESSCSCTTGG-
T ss_pred -----hhHHHHHHHHHHCCCEEEEecC----------------CccccceEEEEEeccCC-eEEEEEEEeCCcCCcchh-
Confidence 0011344556788999977532 24689999999952111 001239999999877421
Q ss_pred CCCCCccccccccCCCCCCCCccccCCCCCCCCCCeeeeeeEEcCH-HHHHHHHHHHHHHHhhcCCCCccccCCchhhhh
Q 001126 699 NPHHPLFRTLQTLHKDDYHNPTFTQGNTTGCPREPWHDLHSKIDGP-AAYDVLTNFEERWRKASKPHGIKKLKSGDDALL 777 (1149)
Q Consensus 699 t~~H~l~~~~~~~~~~Dy~np~~~~~~~~~~pr~PWHDv~vrI~GP-aa~Dl~~~F~qrWn~~t~~~~~~~l~~~~~~l~ 777 (1149)
.-|+|+++++.|+ +|.++...|...|....... +
T Consensus 465 ---------------------------------~~n~D~~l~i~~~~i~~~l~~~F~~~~~~s~~~~-------~----- 499 (687)
T 1xdp_A 465 ---------------------------------RLYTDYSLLTADARITNEVRRVFNFIENPYRPVT-------F----- 499 (687)
T ss_dssp ---------------------------------GTEEEEEEEECCHHHHHHHHHHHHHHHCTTSCCC-------C-----
T ss_pred ---------------------------------hhcceEEEEEeCHHHHHHHHHHHHHHHhhccccc-------h-----
Confidence 2589999999987 69999999999998643210 0
Q ss_pred hhccCCCccCCCCCCCcccCCCCCcEEEEEeecCCCccccCCCChhhhcccccccCcccchhhHHHHHHHHHHHhhcc--
Q 001126 778 RIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQH-- 855 (1149)
Q Consensus 778 ~~~~~p~~~~~~~~p~~~~~~~~~~~vQvlRS~~~~s~~~~P~~p~~~~~~~l~~g~~~~~e~sI~~ayl~aI~~Ak~-- 855 (1149)
. .+ +.+ |.. ....+...+...|+.|++
T Consensus 500 -----~-----------------~l----~~s---------P~~----------------~~~~l~~~I~~ei~~A~~g~ 528 (687)
T 1xdp_A 500 -----D-----------------YL----MVS---------PQN----------------SRRLLYEMVDREIANAQQGL 528 (687)
T ss_dssp -----S-----------------SC----EEE---------TTS----------------HHHHHHHHHHHHHHHHHTTC
T ss_pred -----h-----------------he----eeC---------Cch----------------hhHHHHHHHHHHHHHHHcCC
Confidence 0 00 001 100 122455566667888887
Q ss_pred --EEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCC---CCCCCchhHHHHHHHHhh
Q 001126 856 --FIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPE---GVPTGAATQRILFWQHKT 930 (1149)
Q Consensus 856 --fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rgv~V~IVlP~~Pe---g~p~~~s~~~il~~~~rT 930 (1149)
+|+|.+.| +++. .+..+|.+| +++||+|.||+...-. |.|. .++
T Consensus 529 ~~~I~i~~~~-lpD~-----------------~ii~AL~~A--a~rGV~VrLivrg~c~l~pgvp~-~sd---------- 577 (687)
T 1xdp_A 529 PSGITLKLNN-LVDK-----------------GLVDRLYAA--SSSGVPVNLLVRGMCSLIPNLEG-ISD---------- 577 (687)
T ss_dssp CCCEEEEESC-BCCH-----------------HHHHHHHHH--HHTTCCEEEEESSCBCBCTTCTT-TST----------
T ss_pred CCEEEEEeCC-CCCH-----------------HHHHHHHHH--HHCCCEEEEEEecccccCCCCCC-CCC----------
Confidence 89999887 4542 455666665 3689999999965310 1010 000
Q ss_pred hhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCchhhhhcccCcccceeeeEEEEE---e
Q 001126 931 MQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIV---D 1007 (1149)
Q Consensus 931 m~~~~~si~~~L~~~Gv~~~~~P~~Yl~f~~Lr~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~iYVHSKlmIV---D 1007 (1149)
.+.+.. ++ . ...=|+|+++. |
T Consensus 578 ---------------ni~V~s-------~~--------------------------------~--r~Leh~rI~~f~~~d 601 (687)
T 1xdp_A 578 ---------------NIRAIS-------IV--------------------------------D--RYLEHDRVYIFENGG 601 (687)
T ss_dssp ---------------TEEEEE-------EC--------------------------------S--SSEECCCEEEECGGG
T ss_pred ---------------CEEEEE-------eh--------------------------------h--HHhhCCeEEEEcCCC
Confidence 011100 00 0 01228888888 8
Q ss_pred CeEEEEcccccccCCCCCCCCcceEEEEeCcchh
Q 001126 1008 DEYVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 1008 D~~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
|++++||||||+.|||. +|.|+++.|+|+++.
T Consensus 602 d~~~~IGSAN~d~Rsl~--~n~Ev~~~I~d~~~~ 633 (687)
T 1xdp_A 602 DKKVYLSSADWMTRNID--YRIEVATPLLDPRLK 633 (687)
T ss_dssp SCEEEEESCCBSHHHHH--SEEEEEEECCSHHHH
T ss_pred CCEEEEEcCccchhhhh--hheeeeEEecCHHHH
Confidence 89999999999999998 999999999998753
No 8
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=99.84 E-value=3.2e-21 Score=235.22 Aligned_cols=270 Identities=14% Similarity=0.179 Sum_probs=180.7
Q ss_pred hhHHHHHHHHHHHhcc-----ceEEEEeeccceeeEEeCCCCchHHHHHHHHHHHHhcCCeEEEEEecCCCccccccccc
Q 001126 544 GKCWYDICNAISQAQR-----LIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKM 618 (1149)
Q Consensus 544 ~~~f~al~eAI~~Ak~-----sI~I~~W~~~p~i~L~r~~~~~~g~rL~dlL~~kA~rGVkVrILVwD~~gs~~~~g~k~ 618 (1149)
.+.|+.++++|++|++ +|.++.|.+ .++ ..|.++|++||++||+|+||| | .+++...
T Consensus 351 ~~sf~~vi~~I~~A~~DP~V~sIk~tlYr~-------~~d-----s~Iv~ALi~AA~rGv~V~vLv-e-l~arfde---- 412 (705)
T 2o8r_A 351 YYTYDYVVRLLMEAAISPDVSEIRLTQYRV-------AEN-----SSIISALEAAAQSGKKVSVFV-E-LKARFDE---- 412 (705)
T ss_dssp TBCSHHHHHHHHHHHTCTTEEEEEEEESCC-------CSC-----CHHHHHHHHHHHTTCEEEEEE-C-CCSCC------
T ss_pred hHhHHHHHHHHHHhccCCCceEEEEEEEEE-------cCC-----HHHHHHHHHHHHCCCEEEEEE-e-CCCCcch----
Confidence 3679999999999999 999998855 222 589999999999999999997 7 5543210
Q ss_pred ccccccccHHHHHHhccCCcEEEEccCccccccccccccccccccccccceEEecCC--CCCCCccEEEEEcccccCCCC
Q 001126 619 DGVMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDAD--AGYNRRKIIAFVGGLDLCDGR 696 (1149)
Q Consensus 619 ~g~m~~~~~~t~~~l~~~gV~v~l~p~~~~~~~~~~~~~~~~~~~rHHQKiVVVD~~--~~~~~r~~vAFVGGiNL~dgR 696 (1149)
..+..+.+.|+.+||+|...- .++++|+|++|||++ .+++- +..+++|.-|..+.
T Consensus 413 -----e~ni~wa~~Le~aGv~Vv~g~----------------~~lk~H~Ki~lIdrr~~~~g~~-~~y~~igtGN~n~~- 469 (705)
T 2o8r_A 413 -----ENNLRLSERMRRSGIRIVYSM----------------PGLKVHAKTALILYHTPAGERP-QGIALLSTGNFNET- 469 (705)
T ss_dssp -------CHHHHHHHHHHTCEEEECC----------------TTCCBCCCEEEEEECCCSSSCC-CEEEEEESSCSSCC-
T ss_pred -----hhhHHHHHHHHHCCCEEEEcc----------------CCCCceeEEEEEecccccCCce-eEEEeccccceeee-
Confidence 112356778889999987631 246799999999985 33211 12333332222221
Q ss_pred CCCCCCCccccccccCCCCCCCCccccCCCCCCCCCCeeeeeeEEcCH-HHHHHHHHHHHHHHhhcCCCCccccCCchhh
Q 001126 697 YDNPHHPLFRTLQTLHKDDYHNPTFTQGNTTGCPREPWHDLHSKIDGP-AAYDVLTNFEERWRKASKPHGIKKLKSGDDA 775 (1149)
Q Consensus 697 wDt~~H~l~~~~~~~~~~Dy~np~~~~~~~~~~pr~PWHDv~vrI~GP-aa~Dl~~~F~qrWn~~t~~~~~~~l~~~~~~ 775 (1149)
...-|.|+++...+| ++.|+...|...|......
T Consensus 470 ---------------------------------tariy~D~~l~t~~~~i~~dl~~vF~~~tg~~~~~------------ 504 (705)
T 2o8r_A 470 ---------------------------------TARIYSDTTLMTANTDIVHDVYRLFRILDGDPEPA------------ 504 (705)
T ss_dssp ---------------------------------CSSCEEEEEEEECCHHHHHHHHHHHHHHTTCCCCS------------
T ss_pred ---------------------------------EEEEEeeeeeeecChHHHHHHHHHHHHHhCCCCCC------------
Confidence 012477888888776 6799999996665421000
Q ss_pred hhhhccCCCccCCCCCCCcccCCCCCcEEEEEeecCCCccccCCCChhhhcccccccCcccchhhHHHHHHHHHHHhhcc
Q 001126 776 LLRIERIPGIIGISDAPSVRENDAESWHVQIFRSIDSTSVRGFPKDPKEATSKNLVCGKNVLIDMSIHTAYVKAIRSAQH 855 (1149)
Q Consensus 776 l~~~~~~p~~~~~~~~p~~~~~~~~~~~vQvlRS~~~~s~~~~P~~p~~~~~~~l~~g~~~~~e~sI~~ayl~aI~~Ak~ 855 (1149)
.+ .|++-+ |.. ....|.+.+..+|.+|++
T Consensus 505 -------------------------~~-~~l~~s---------P~~----------------~~~~i~~~i~~eI~~Ak~ 533 (705)
T 2o8r_A 505 -------------------------RF-SRLLVA---------RYN----------------MGEAITNLIEREIENVKR 533 (705)
T ss_dssp -------------------------CC-SSCEET---------TTT----------------HHHHHHHHHHHHHHHHHT
T ss_pred -------------------------Cc-eEEEEC---------Cch----------------HHHHHHHHHHHHHHHHhc
Confidence 00 121111 111 134789999999999999
Q ss_pred ----EEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCC----CCCCCCCchhHHHHHHH
Q 001126 856 ----FIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMW----PEGVPTGAATQRILFWQ 927 (1149)
Q Consensus 856 ----fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rgv~V~IVlP~~----Peg~p~~~s~~~il~~~ 927 (1149)
+|+|.++| +++. .+..+|.+| +.+||+|.||+-.. | |.+ .+
T Consensus 534 G~~a~I~ik~n~-l~D~-----------------~ii~aL~~A--s~~GV~V~LIVRGiC~L~P-gv~--~s-------- 582 (705)
T 2o8r_A 534 GKRGYMLLKMNG-LQDK-----------------NVITQLYRA--SEAGVEIDLIVRGICCLVP-DMP--QS-------- 582 (705)
T ss_dssp TCCCEEEEEESC-BCCH-----------------HHHHHHHHH--HHTTCEEEEEESSCBCSCC-SSG--GG--------
T ss_pred CCCCEEEEEcCC-CCCH-----------------HHHHHHHHH--HHCCCeEEEEEccccccCC-CCC--CC--------
Confidence 99999998 5543 466666665 35899999999431 1 000 00
Q ss_pred HhhhhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCchhhhhcccCcccceeeeEEEEE-
Q 001126 928 HKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVHSKGMIV- 1006 (1149)
Q Consensus 928 ~rTm~~~~~si~~~L~~~Gv~~~~~P~~Yl~f~~Lr~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~iYVHSKlmIV- 1006 (1149)
..+.+.. ++ . ...=|+|++++
T Consensus 583 -----------------dni~V~S-------iv--------------------------------g--r~Leh~RIy~f~ 604 (705)
T 2o8r_A 583 -----------------RNIRVTR-------LV--------------------------------D--MYLEHSRIWCFH 604 (705)
T ss_dssp -----------------TTEEEEE-------CC--------------------------------S--SSEECCCEEEEC
T ss_pred -----------------CCeEEEe-------eH--------------------------------H--HHHhcCEEEEEE
Confidence 0111110 00 0 01238899999
Q ss_pred --eCeEEEEcccccccCCCCCCCCcceEEEEeCcchh
Q 001126 1007 --DDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 1007 --DD~~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
||+++.||||||+.|||. ++-|+++.|+|+++.
T Consensus 605 ~gd~~~~~IGSAn~m~Rnl~--~r~Ev~~~i~d~~~~ 639 (705)
T 2o8r_A 605 NGGKEEVFISSADWMKRNLY--NRIETACPVLDPTLR 639 (705)
T ss_dssp GGGSCEEEEESCCBCHHHHH--TSBCEEEECCSHHHH
T ss_pred CCCCcEEEEeccccchhhhh--heeEEEEEEcCHHHH
Confidence 999999999999999998 999999999999753
No 9
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.83 E-value=1.1e-20 Score=193.32 Aligned_cols=141 Identities=18% Similarity=0.299 Sum_probs=107.9
Q ss_pred CcccccCCCCCcceeeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCC
Q 001126 329 NMQIVPSTKGSLKVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDP 408 (1149)
Q Consensus 329 g~q~Va~q~~~~~~~LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~nt~nP 408 (1149)
..-.||.......+.+++|+|+|+|++|++|+.+|..+++. +|.+ ...++||||+|.+++++++||+++++|+||
T Consensus 11 ~~~~~~~~~~~~~~~~~~g~L~V~VieA~~L~~~D~~~~~~--~f~~---~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP 85 (157)
T 2fk9_A 11 SSGLVPRGSMSSGTMKFNGYLRVRIGEAVGLQPTRWSLRHS--LFKK---GHQLLDPYLTVSVDQVRVGQTSTKQKTNKP 85 (157)
T ss_dssp CSCCCC-------CCCEEEEEEEEEEEEECCCCCHHHHHTT--TSSS---SCCCCCEEEEEEETTEEEEECCCCSSCSSC
T ss_pred cCccccCCCCcchhccCccEEEEEEEEEECCCCcccccccc--cccc---CCCCCCeEEEEEECCEeeEEeeecCCCCCC
Confidence 34456654444456788999999999999999888532110 1110 012389999999999888899999999999
Q ss_pred eeceEEEEEccCCCceEEEEEEEccCCC-CcceeeEEEeceeeccC----CceeeeEeeccCCCCCCCCCceeEEEEEee
Q 001126 409 VWQQHFYVPVAHSAAEVHFFVKDSDVVG-SELIGTVAIPVEQIYSG----GKVEGTYPVLNGSGKPCKPGATLTLSIQYT 483 (1149)
Q Consensus 409 vWNE~F~f~v~~~~~~L~~~V~D~D~~~-ddfIG~v~Ipl~~L~~G----~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~ 483 (1149)
+|||+|.|.+.. ...|.|+|||+|..+ |++||++.|++++|..+ ...+.||+|.. .|+|+|+++|.
T Consensus 86 ~WNE~F~f~v~~-~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------~G~i~l~l~~~ 156 (157)
T 2fk9_A 86 TYNEEFCANVTD-GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------EGKVFVVITLT 156 (157)
T ss_dssp EEEEEEEEEEEE-ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------SCEEEEEEEEC
T ss_pred ccCcEEEEEcCC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------CcEEEEEEEEE
Confidence 999999999864 468999999999865 88999999999999865 67899999942 36899999884
No 10
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=7.9e-19 Score=174.45 Aligned_cols=124 Identities=27% Similarity=0.463 Sum_probs=107.8
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeceEEEEEccCC---
Q 001126 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHS--- 421 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~nt~nPvWNE~F~f~v~~~--- 421 (1149)
..|.|.|+|++|++|+.+|. +. +||||+|.+.+++ +||++++++.||+|||+|.|.+...
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~---------------~dpyv~v~~~~~~-~kT~v~~~t~nP~wne~f~f~v~~~~~~ 67 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GK---------------PDPIVSVIFKDEK-KKTKKVDNELNPVWNEILEFDLRGIPLD 67 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SC---------------CCEEEEEECSSCE-EECCCCCSCSSCEEEEEEEEECSSCCCC
T ss_pred CCcEEEEEEEEeeCCCCCCC-CC---------------CCeEEEEEECCEe-EEeeeecCCCCCccCcEEEEEecccccC
Confidence 45789999999999999887 65 8999999999877 5999999999999999999998653
Q ss_pred -CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEe---eccCCCCCCCCCceeEEEEEeecccc
Q 001126 422 -AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYP---VLNGSGKPCKPGATLTLSIQYTPMER 487 (1149)
Q Consensus 422 -~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~p---L~~~~Gk~~~~~g~L~L~L~f~p~~~ 487 (1149)
...|+|+|||+|.. .+++||++.|++.+|..+...+.|++ |.+.+++. ..|+|+|+++|.|...
T Consensus 68 ~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~--~~G~l~l~~~~~p~~~ 136 (140)
T 2dmh_A 68 FSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQD--TGATIDLVIGYDPPSG 136 (140)
T ss_dssp TTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCE--EEEEEEEEEEECCCBS
T ss_pred CCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCC--CCCEEEEEEEEECCCC
Confidence 47899999999986 57899999999999998888889988 77666653 3489999999998543
No 11
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=9.6e-19 Score=172.68 Aligned_cols=122 Identities=22% Similarity=0.331 Sum_probs=107.1
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeceEEEEEccCCCc
Q 001126 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAA 423 (1149)
Q Consensus 344 LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~nt~nPvWNE~F~f~v~~~~~ 423 (1149)
-..|+|.|+|++|++|+.+|..|. +||||+|.+.+.+. ||++++++.||+|||+|.|.+.+...
T Consensus 10 ~~~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~-kT~~~~~t~nP~wne~f~f~~~~~~~ 73 (133)
T 2ep6_A 10 KDVGILQVKVLKAADLLAADFSGK---------------SDPFCLLELGNDRL-QTHTVYKNLNPEWNKVFTFPIKDIHD 73 (133)
T ss_dssp CCSEEEEEEEEEEESCCCSSSSSC---------------CCEEEEEEETTEEE-ECCCCSSCSSCCCCEEEEEEESCTTC
T ss_pred CCceEEEEEEEeeECCCCCCCCCC---------------cCeEEEEEECCEEE-EeeeecCCCCCccccEEEEEecCCCC
Confidence 346899999999999999988776 89999999999875 99999999999999999999987778
Q ss_pred eEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCCCCCCCCCceeEEEEEeec
Q 001126 424 EVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTP 484 (1149)
Q Consensus 424 ~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~p 484 (1149)
.|+|+|||+|.. .+++||++.|++.++..|. ..|++|.+.+++. ...|+|+|+++|..
T Consensus 74 ~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~~ 132 (133)
T 2ep6_A 74 VLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLIY 132 (133)
T ss_dssp EEEEEEEEEETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEEE
T ss_pred EEEEEEEECCCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEEe
Confidence 999999999986 5889999999999998764 5899998766543 34679999999863
No 12
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.78 E-value=1.5e-18 Score=175.18 Aligned_cols=123 Identities=20% Similarity=0.341 Sum_probs=99.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC-----EEEeeeeeecCCCCCeeceEEEEEccC
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG-----AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g-----~~~~rTkVi~nt~nPvWNE~F~f~v~~ 420 (1149)
.|.|+|+|++|++|+.+|..+. +||||+|.+.+ ....||++++++.||+|||+|.|.+..
T Consensus 19 ~~~L~V~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 83 (153)
T 3b7y_A 19 SRIVRVRVIAGIGLAKKDILGA---------------SDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP 83 (153)
T ss_dssp CEEEEEEEEEEESCC----------------------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT
T ss_pred ccEEEEEEEEeeCCCCCCCCCC---------------CCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC
Confidence 4679999999999999888776 89999999974 345699999999999999999999987
Q ss_pred CCceEEEEEEEccCC-CCcceeeEEEeceeeccCCce------eeeEeeccCCCCCCCCCceeEEEEEeec
Q 001126 421 SAAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKV------EGTYPVLNGSGKPCKPGATLTLSIQYTP 484 (1149)
Q Consensus 421 ~~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~------~~W~pL~~~~Gk~~~~~g~L~L~L~f~p 484 (1149)
....|+|+|||+|.. .+++||++.|++.+|..+... +.||+|...+++. +..|+|+|+++|.|
T Consensus 84 ~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~~P 153 (153)
T 3b7y_A 84 QQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLP 153 (153)
T ss_dssp TTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEECC
T ss_pred CCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEEeC
Confidence 778999999999986 588999999999999876432 5899997654432 45689999999986
No 13
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.78 E-value=4.6e-19 Score=175.31 Aligned_cols=125 Identities=23% Similarity=0.423 Sum_probs=108.9
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeec-CCCCCeeceEEEEEccCCC
Q 001126 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVIS-NSEDPVWQQHFYVPVAHSA 422 (1149)
Q Consensus 344 LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~-nt~nPvWNE~F~f~v~~~~ 422 (1149)
...|+|+|+|++|++|+.+|..+. +||||+|.+.+.+. ||++++ ++.||+|||+|.|.+....
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~-kT~~~~~~~~nP~Wne~f~f~v~~~~ 70 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNN---------------MDPYVQLTCRTQDQ-KSNVAEGMGTTPEWNETFIFTVSEGT 70 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCS---------------SCCCEEEESSSCEE-ECCCCTTCCSSCEEEEEEEEEEESSC
T ss_pred CCcEEEEEEEEeccCCCCcccCCC---------------cCceEEEEECCccc-eeEeccCCCCCCccCcEEEEEECCCC
Confidence 356899999999999999988776 89999999999875 999998 8999999999999998877
Q ss_pred ceEEEEEEEccCC-CCcceeeEEEeceee-ccCCceeeeEeeccCCCCCCCCCceeEEEEEeeccccc
Q 001126 423 AEVHFFVKDSDVV-GSELIGTVAIPVEQI-YSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPMERL 488 (1149)
Q Consensus 423 ~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L-~~G~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~p~~~~ 488 (1149)
..|+|+|||+|.. .|++||++.|++.++ ..+...+.||+|. .+++ ..|+|+|+++|.|...+
T Consensus 71 ~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~---~~G~i~l~l~~~p~~~~ 134 (136)
T 1wfj_A 71 TELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEE---YKGEIWVALSFKPSGPS 134 (136)
T ss_dssp CEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTE---EEEEEEEEEEEEECCSC
T ss_pred CEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCc---cCEEEEEEEEEEeCCCC
Confidence 8999999999985 588999999999999 4566678999997 4443 34799999999997654
No 14
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.78 E-value=4.2e-18 Score=171.01 Aligned_cols=120 Identities=25% Similarity=0.390 Sum_probs=104.6
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeceEEEEEccCCCce
Q 001126 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSAAE 424 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~nt~nPvWNE~F~f~v~~~~~~ 424 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+++... ||+++.++.||+|||+|.|.+......
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~-kT~~~~~t~nP~Wne~f~f~v~~~~~~ 78 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDKTGS---------------SDPYVTVQVGKTKK-RTKTIYGNLNPVWEENFHFECHNSSDR 78 (148)
T ss_dssp CCEEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEETTEEE-ECCCCCSCSSCEEEEEEEEEECSTTCE
T ss_pred cccEEEEEEEeeeCCCCCCCCCC---------------cCeEEEEEECCEEE-ECCccCCCCCCCcccEEEEEecCCCCE
Confidence 46899999999999999988776 89999999988765 999999999999999999999887889
Q ss_pred EEEEEEEccCC------------CCcceeeEEEeceeeccCCceeeeEeeccCCCCCCCCCceeEEEEEee
Q 001126 425 VHFFVKDSDVV------------GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYT 483 (1149)
Q Consensus 425 L~~~V~D~D~~------------~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~ 483 (1149)
|.|+|||+|.. .+++||++.|++.++. ...+.|++|....++. ...|+|+|+|+|.
T Consensus 79 l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~-~~~G~i~l~l~~e 146 (148)
T 3kwu_A 79 IKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS-AVSGAIRLHISVE 146 (148)
T ss_dssp EEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC-CCCCEEEEEEEEE
T ss_pred EEEEEEECCCCccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC-CCceEEEEEEEEE
Confidence 99999999974 6899999999999994 4567999997554433 3457999999985
No 15
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.78 E-value=9.7e-19 Score=173.58 Aligned_cols=130 Identities=17% Similarity=0.326 Sum_probs=104.3
Q ss_pred eeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeceEEEEEccCCC
Q 001126 343 LLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSA 422 (1149)
Q Consensus 343 ~LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~nt~nPvWNE~F~f~v~~~~ 422 (1149)
.+++|+|+|+|++|++|+.+|.++.+. +++. .+...+||||+|.+++..++||+++.+|.||+|||+|.|.+...
T Consensus 2 ~~~~g~L~v~v~~a~~L~~~d~~~~~~---~g~~-~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~- 76 (136)
T 1gmi_A 2 VVFNGLLKIKICEAVSLKPTAWSLRDA---VGPR-PQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG- 76 (136)
T ss_dssp CCEEEEEEEEEEEEESCCCCHHHHCC----CCSS-CCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE-
T ss_pred cccceEEEEEEEeCcCCCCcccccccc---cccc-cCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC-
Confidence 357899999999999999887543210 1100 01123899999999998888999999999999999999998755
Q ss_pred ceEEEEEEEccCC-CCcceeeEEEeceeeccC--CceeeeEeeccCCCCCCCCCceeEEEEEeecc
Q 001126 423 AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSG--GKVEGTYPVLNGSGKPCKPGATLTLSIQYTPM 485 (1149)
Q Consensus 423 ~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G--~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~p~ 485 (1149)
..|.|+|||+|.. .|++||++.|++.++..+ ...+.|++|. +.|+|+|+++|.+.
T Consensus 77 ~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~--------~~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 77 RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLE--------PEGKVYVIIDLSGS 134 (136)
T ss_dssp CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECB--------SSCEEEEEEEEEEE
T ss_pred CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcC--------CCeEEEEEEEEEec
Confidence 7899999999985 488999999999999864 3458999984 13699999999764
No 16
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.75 E-value=2.7e-18 Score=167.37 Aligned_cols=118 Identities=21% Similarity=0.352 Sum_probs=99.0
Q ss_pred ceEEEEEEEEeeCCCCC---CCCCccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeecCCCCCeeceEEEEEccC
Q 001126 346 HGNLDIWIYSAKNLPNM---DMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~---D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g--~~~~rTkVi~nt~nPvWNE~F~f~v~~ 420 (1149)
+|.|.|+|++|++|+.+ |..+. +||||+|.+.+ ...+||++++++.||+|||+|.|.+..
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~---------------~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 66 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDT---------------PDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDP 66 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCC---------------CCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECT
T ss_pred CcEEEEEEEeeeCCCCCCccccCCC---------------CCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecC
Confidence 47899999999999975 44454 89999999986 244699999999999999999999954
Q ss_pred C-CceEEEEEEEccCCCCcceeeEEEeceeeccCCceeeeEeeccCCCCCCCCCceeEEEEEeec
Q 001126 421 S-AAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTP 484 (1149)
Q Consensus 421 ~-~~~L~~~V~D~D~~~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~p 484 (1149)
. ...|.|+|||+|..++++||++.|+|.+|..|...+.|++|.. . ..|.|+|+|+..|
T Consensus 67 ~~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~-~-----~~g~i~~~le~~~ 125 (126)
T 1rlw_A 67 NQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ-V-----TEMVLEMSLEVAS 125 (126)
T ss_dssp TSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEETT-T-----EEEEEEEEEECCC
T ss_pred CCCCEEEEEEEECCCCCCceeEEEEEEHHHccCCCcEEEEEEcCC-C-----ceEEEEEEEEeCC
Confidence 4 5789999999999889999999999999999988899999953 1 2246777666443
No 17
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.74 E-value=1.4e-17 Score=172.45 Aligned_cols=124 Identities=21% Similarity=0.352 Sum_probs=98.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC-----EEEeeeeeecCCCCCeeceEEEEEccC
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG-----AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g-----~~~~rTkVi~nt~nPvWNE~F~f~v~~ 420 (1149)
.|+|.|+|++|++|+.+|..+. +||||+|.+.+ ....||+|++++.||+|||+|.|.+..
T Consensus 7 ~g~L~V~v~~a~~L~~~d~~g~---------------~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~ 71 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDILGA---------------SDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP 71 (176)
T ss_dssp CEEEEEEEEEEESCC---CCCC---------------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT
T ss_pred cEEEEEEEEEeeCCCCcCCCCC---------------cCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC
Confidence 4789999999999999988776 89999999975 144699999999999999999999987
Q ss_pred CCceEEEEEEEccCC-CCcceeeEEEeceeeccCCce-e-----eeEeeccCCCCCCCCCceeEEEEEeecc
Q 001126 421 SAAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKV-E-----GTYPVLNGSGKPCKPGATLTLSIQYTPM 485 (1149)
Q Consensus 421 ~~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~-~-----~W~pL~~~~Gk~~~~~g~L~L~L~f~p~ 485 (1149)
....|.|+|||+|.. .++|||++.|+|.+|..+... + .||+|....++. +..|+|+|+|+|.|.
T Consensus 72 ~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 72 QRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTYLPK 142 (176)
T ss_dssp TTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEECC-
T ss_pred CCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEEEeC
Confidence 778999999999985 589999999999999876432 2 799997654432 345799999999997
No 18
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.72 E-value=4.2e-17 Score=160.70 Aligned_cols=120 Identities=21% Similarity=0.307 Sum_probs=98.7
Q ss_pred eEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC-EEEeeeeeecCCCCCeeceEEEEEccCCCceE
Q 001126 347 GNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG-AVVGRTFVISNSEDPVWQQHFYVPVAHSAAEV 425 (1149)
Q Consensus 347 GtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g-~~~~rTkVi~nt~nPvWNE~F~f~v~~~~~~L 425 (1149)
..|+|+|++|++|+.+|..|. +||||+|.+.+ ...+||+++++++||+|||+|.|.+.... .|
T Consensus 5 ~~L~V~v~~a~~L~~~d~~g~---------------sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~-~l 68 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDFFRL---------------PDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTD-SI 68 (132)
T ss_dssp EEEEEEEEEEESCCCCSTTCC---------------CCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTC-CE
T ss_pred EEEEEEEEEeECCCCCCCCCC---------------cCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCC-EE
Confidence 369999999999999998876 89999999975 34569999999999999999999997654 59
Q ss_pred EEEEEEccCCC----CcceeeEEEeceeec-cCCceeeeEeeccCCC-CCCCCCceeEEEEEe
Q 001126 426 HFFVKDSDVVG----SELIGTVAIPVEQIY-SGGKVEGTYPVLNGSG-KPCKPGATLTLSIQY 482 (1149)
Q Consensus 426 ~~~V~D~D~~~----ddfIG~v~Ipl~~L~-~G~~~~~W~pL~~~~G-k~~~~~g~L~L~L~f 482 (1149)
.|+|||+|..+ |+|||++.|++.+|. .+.....|++|....+ +..+..|+|+|+|++
T Consensus 69 ~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 69 TISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp EEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred EEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 99999999865 789999999999883 3344458899976532 223456899999875
No 19
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.71 E-value=3e-17 Score=170.35 Aligned_cols=127 Identities=24% Similarity=0.349 Sum_probs=102.2
Q ss_pred eeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeceEEEEEccCCC
Q 001126 343 LLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSA 422 (1149)
Q Consensus 343 ~LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~nt~nPvWNE~F~f~v~~~~ 422 (1149)
....++|.|+|++|++|++.+..++ +||||+|.+++.+ +||+|+++++||+|||+|.|.+. ..
T Consensus 32 ~~~~~~L~V~V~~A~~L~~~~~~~~---------------sDPYv~v~~~~~~-~kT~v~~~tlnP~Wne~f~f~v~-~~ 94 (173)
T 2nq3_A 32 LTMKSQLQITVISAKLKENKKNWFG---------------PSPYVEVTVDGQS-KKTEKCNNTNSPKWKQPLTVIVT-PV 94 (173)
T ss_dssp CSCCEEEEEEEEEEEECCCC--CCC---------------CCEEEEEEETTEE-EECCCCSSCSSCEEEEEEEEEEC-TT
T ss_pred cCCceEEEEEEEEeECCCCcccCCC---------------CCeEEEEEECCEE-eEccccCCCCCCeECCEEEEEeC-CC
Confidence 3457889999999999995443333 8999999999944 59999999999999999999985 47
Q ss_pred ceEEEEEEEccCC-CCcceeeEEEeceeeccCC-----ceeeeEeeccCCCCCCCCCceeEEEEEeecccc
Q 001126 423 AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGG-----KVEGTYPVLNGSGKPCKPGATLTLSIQYTPMER 487 (1149)
Q Consensus 423 ~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~-----~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~p~~~ 487 (1149)
..|.|+|||+|.. .+++||++.|++.+|..+. ..+.|++|...++. .+..|+|+|.+.+.+...
T Consensus 95 ~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~-~~~~G~L~v~l~~l~~~~ 164 (173)
T 2nq3_A 95 SKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEP-TETIGDLSICLDGLQLES 164 (173)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCT-TSEEEEEEEEEESEECC-
T ss_pred CEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCC-CcccEEEEEEEeeeecch
Confidence 8999999999986 5889999999999997542 23579999876432 234579999999987643
No 20
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.66 E-value=3.8e-16 Score=154.86 Aligned_cols=105 Identities=14% Similarity=0.269 Sum_probs=89.8
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeecCCCCCeeceEEEEE-c
Q 001126 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA----GAVVGRTFVISNSEDPVWQQHFYVP-V 418 (1149)
Q Consensus 344 LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~----g~~~~rTkVi~nt~nPvWNE~F~f~-v 418 (1149)
...|.|.|+|++|++|+. +..+. +||||+|.+. +....||++++++.||+|||+|.|. +
T Consensus 17 ~~~~~L~V~V~~a~~L~~-~~~g~---------------~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v 80 (134)
T 2b3r_A 17 YRNGTLFIMVMHIKDLVT-EDGAD---------------PNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGY 80 (134)
T ss_dssp EETTEEEEEEEEEECCCC-TTSCC---------------CCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESC
T ss_pred ecCCEEEEEEEEeeCCCC-CCCCC---------------CCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCc
Confidence 456789999999999995 66555 8999999992 2334599999999999999999999 7
Q ss_pred cCC---CceEEEEEEEccCCC-CcceeeEEEeceeeccCCceeeeEeecc
Q 001126 419 AHS---AAEVHFFVKDSDVVG-SELIGTVAIPVEQIYSGGKVEGTYPVLN 464 (1149)
Q Consensus 419 ~~~---~~~L~~~V~D~D~~~-ddfIG~v~Ipl~~L~~G~~~~~W~pL~~ 464 (1149)
... ...|.|+|||+|..+ +++||++.|++.++..+...+.||+|.+
T Consensus 81 ~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 81 SKETLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp CHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred CHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 532 478999999999864 8899999999999998888899999964
No 21
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.66 E-value=3.7e-16 Score=157.89 Aligned_cols=105 Identities=26% Similarity=0.320 Sum_probs=91.9
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeecCCCCCeeceEEEEEccCC-
Q 001126 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA--GAVVGRTFVISNSEDPVWQQHFYVPVAHS- 421 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~--g~~~~rTkVi~nt~nPvWNE~F~f~v~~~- 421 (1149)
..+.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+...
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 104 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDMGGT---------------SDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE 104 (152)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHH
T ss_pred CCCEEEEEEEEeECCCCccCCCC---------------cCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHH
Confidence 35789999999999999988776 8999999994 23345999999999999999999998643
Q ss_pred --CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeecc
Q 001126 422 --AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLN 464 (1149)
Q Consensus 422 --~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~ 464 (1149)
...|.|+|||+|.. .+++||++.|++.++..|...+.|++|.+
T Consensus 105 l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 105 LGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp HTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred cCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 47899999999985 58899999999999998888899999964
No 22
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=5.5e-16 Score=154.38 Aligned_cols=105 Identities=23% Similarity=0.251 Sum_probs=91.0
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeecCCCCCeeceEEEEEccC---
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA--GAVVGRTFVISNSEDPVWQQHFYVPVAH--- 420 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~--g~~~~rTkVi~nt~nPvWNE~F~f~v~~--- 420 (1149)
.+.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+..
T Consensus 25 ~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~ 89 (141)
T 2d8k_A 25 ESTLTVKIMKAQELPAKDFSGT---------------SDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEK 89 (141)
T ss_dssp SCCEEEEEEEEESCCCCSSSSC---------------CCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHH
T ss_pred CCEEEEEEEEeECCCCCCCCCC---------------CCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHH
Confidence 4679999999999999988776 8999999994 3344699999999999999999998532
Q ss_pred -CCceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccC
Q 001126 421 -SAAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 421 -~~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~ 465 (1149)
....|.|+|||+|.. .+++||++.|++.+|..+...+.|++|...
T Consensus 90 ~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 90 VVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp HTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred cccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 247899999999985 588999999999999988888999999754
No 23
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.65 E-value=2.7e-16 Score=159.19 Aligned_cols=108 Identities=23% Similarity=0.356 Sum_probs=90.4
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCCCCCeeceEEEEEc-
Q 001126 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVPV- 418 (1149)
Q Consensus 344 LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g----~~~~rTkVi~nt~nPvWNE~F~f~v- 418 (1149)
...|.|.|+|++|++|+.+| .+. +||||+|.+.. ....||++++++.||+|||+|.|.+
T Consensus 24 ~~~~~L~V~v~~a~~L~~~d-~g~---------------~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 87 (153)
T 3fbk_A 24 AQDRVLLLHIIEGKGLISKQ-PGT---------------CDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQ 87 (153)
T ss_dssp ESSSEEEEEEEEEESCCCCS-SSC---------------CCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECC
T ss_pred CCCCEEEEEEEEeeCCCCCC-CCC---------------CCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecc
Confidence 34678999999999999888 455 89999999932 2345999999999999999999998
Q ss_pred -cCCCceEEEEEEEccCC-C-CcceeeEEEeceeecc-CCceeeeEeeccCCC
Q 001126 419 -AHSAAEVHFFVKDSDVV-G-SELIGTVAIPVEQIYS-GGKVEGTYPVLNGSG 467 (1149)
Q Consensus 419 -~~~~~~L~~~V~D~D~~-~-ddfIG~v~Ipl~~L~~-G~~~~~W~pL~~~~G 467 (1149)
......|.|+|||+|.. . +++||++.|++.+|.. +...+.||+|.+...
T Consensus 88 ~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~~ 140 (153)
T 3fbk_A 88 EEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEHL 140 (153)
T ss_dssp GGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTTG
T ss_pred cHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChhh
Confidence 44446799999999985 3 8999999999999984 677889999986543
No 24
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.65 E-value=2.9e-16 Score=156.60 Aligned_cols=104 Identities=26% Similarity=0.320 Sum_probs=91.1
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeecCCCCCeeceEEEEEccCC-
Q 001126 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA--GAVVGRTFVISNSEDPVWQQHFYVPVAHS- 421 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~--g~~~~rTkVi~nt~nPvWNE~F~f~v~~~- 421 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+...
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 96 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDMGGT---------------SDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE 96 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGGGBC---------------CCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHH
T ss_pred CCCEEEEEEEEecCCCCCCCCCC---------------cCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhh
Confidence 45789999999999998887765 8999999993 33446999999999999999999998643
Q ss_pred --CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeec
Q 001126 422 --AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVL 463 (1149)
Q Consensus 422 --~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~ 463 (1149)
...|+|+|||+|.. .+++||++.|+|.++..+...+.|++|.
T Consensus 97 l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 97 LGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp HTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred cCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 37899999999985 5889999999999999888889999995
No 25
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.65 E-value=6e-16 Score=163.72 Aligned_cols=133 Identities=17% Similarity=0.207 Sum_probs=99.3
Q ss_pred hHHHHHHHHHHHhccceEEEEeeccceeeEEeCCCCchHHHHHHHHHHHHhcCCeEEEEEecCCCccccccccccccccc
Q 001126 545 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQT 624 (1149)
Q Consensus 545 ~~f~al~eAI~~Ak~sI~I~~W~~~p~i~L~r~~~~~~g~rL~dlL~~kA~rGVkVrILVwD~~gs~~~~g~k~~g~m~~ 624 (1149)
+.|.+|+++|++||++|+|+.|.|. + ..|.++|++||+|||+||||+ |......
T Consensus 46 ~~~~~ll~~I~~A~~sI~i~~y~~~-------~------~~i~~aL~~aa~rGV~Vrii~-D~~~~~~------------ 99 (196)
T 4ggj_A 46 SSLSRLLRALLAARSSLELCLFAFS-------S------PQLGRAVQLLHQRGVRVRVIT-DCDYMAL------------ 99 (196)
T ss_dssp CHHHHHHHHHHTCSSEEEEEESCBC-------C------HHHHHHHHHHHHTTCEEEEEE-SSCCC--------------
T ss_pred HHHHHHHHHHHHhheEEEEEEEEeC-------C------HHHHHHHHHHHHcCCcEEEEE-ecccccc------------
Confidence 6899999999999999999999662 2 579999999999999999997 7532110
Q ss_pred ccHHHHHHhccCCcEEEEccCccccccccccccccccccccccceEEecCCCCCCCccEEEEEcccccCCCCCCCCCCCc
Q 001126 625 HDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPL 704 (1149)
Q Consensus 625 ~~~~t~~~l~~~gV~v~l~p~~~~~~~~~~~~~~~~~~~rHHQKiVVVD~~~~~~~r~~vAFVGGiNL~dgRwDt~~H~l 704 (1149)
.......|...||+|+.... ....|+|++|||++ ++|+||.|++...+.
T Consensus 100 -~~~~~~~l~~~gi~v~~~~~----------------~~~~H~K~~viD~~--------~~~~GS~N~t~~~~~------ 148 (196)
T 4ggj_A 100 -NGSQIGLLRKAGIQVRHDQD----------------LGYMHHKFAIVDKK--------VLITGSLNWTTQAIQ------ 148 (196)
T ss_dssp --CCHHHHHHHTTCEEEECCS----------------SSCCCCEEEEETTT--------EEEEESCCBCHHHHH------
T ss_pred -cHHHHHHHHhcCCCcccccc----------------cccccCcEEEEcce--------EEEecCccCChhhhc------
Confidence 01134457788999876532 13479999999997 999999998774321
Q ss_pred cccccccCCCCCCCCccccCCCCCCCCCCeeeeeeEEcCHHHHHHHHHHHHHHHhhc
Q 001126 705 FRTLQTLHKDDYHNPTFTQGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAS 761 (1149)
Q Consensus 705 ~~~~~~~~~~Dy~np~~~~~~~~~~pr~PWHDv~vrI~GPaa~Dl~~~F~qrWn~~t 761 (1149)
..|-++.+.-.+++|..+.+.|.+.|+...
T Consensus 149 ---------------------------~n~E~~~~i~~~~~~~~~~~~F~~~W~~~~ 178 (196)
T 4ggj_A 149 ---------------------------NNRENVLIMEDTEYVRLFLEEFERIWEEFD 178 (196)
T ss_dssp ---------------------------HCCEEEEEECCHHHHHHHHHHHHHHHHHTC
T ss_pred ---------------------------ccceeEEEEECHHHHHHHHHHHHHHHHhCC
Confidence 123334444445589999999999999754
No 26
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.65 E-value=1.6e-16 Score=158.13 Aligned_cols=109 Identities=25% Similarity=0.298 Sum_probs=93.4
Q ss_pred eeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCE-------------EEeeeeeecCCCCCe
Q 001126 343 LLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGA-------------VVGRTFVISNSEDPV 409 (1149)
Q Consensus 343 ~LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~-------------~~~rTkVi~nt~nPv 409 (1149)
....|.|.|+|++|++|+.+|..|. +||||+|.+.+. ...||+++++++||+
T Consensus 14 ~y~~~~L~V~v~~a~~L~~~d~~g~---------------~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~ 78 (142)
T 1rh8_A 14 NYDLGNLIIHILQARNLVPRDNNGY---------------SDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPE 78 (142)
T ss_dssp EEETTEEEEEEEEEESCCCCSSSSC---------------SCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCE
T ss_pred EEcCCEEEEEEEEecCCCCCCCCCC---------------CCceEEEEEecCCCcccccccccccceeeccccCCCCCCC
Confidence 3447899999999999999998776 899999999863 235999999999999
Q ss_pred eceEEEEE-ccC---CCceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCC
Q 001126 410 WQQHFYVP-VAH---SAAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGS 466 (1149)
Q Consensus 410 WNE~F~f~-v~~---~~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~ 466 (1149)
|||+|.|. +.. ....|.|+|||+|.. .+++||++.|++.++..+...+.||+|....
T Consensus 79 wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 79 WNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp EEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred CCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 99999997 542 246899999999986 5889999999999998877788999997543
No 27
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=5.5e-16 Score=156.00 Aligned_cols=106 Identities=24% Similarity=0.371 Sum_probs=92.0
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCCCCCeeceEEEEEcc
Q 001126 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVPVA 419 (1149)
Q Consensus 344 LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g----~~~~rTkVi~nt~nPvWNE~F~f~v~ 419 (1149)
...|.|.|+|++|++|+.+|..+. +||||+|.+.. ....||++++++.||+|||+|.|.+.
T Consensus 28 ~~~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 92 (149)
T 1a25_A 28 IDREVLIVVVRDAKNLVPMDPNGL---------------SDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLK 92 (149)
T ss_dssp ESSSEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECC
T ss_pred ecCCEEEEEEEEeeCCCCCCCCCC---------------cCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEec
Confidence 346889999999999999988776 89999999974 34469999999999999999999987
Q ss_pred CC--CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccC
Q 001126 420 HS--AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 420 ~~--~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~ 465 (1149)
.. ...|.|+|||+|.. .+++||++.|++.+|..+ ..+.||+|.+.
T Consensus 93 ~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 93 ESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp SGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred cccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 54 36899999999986 588999999999999876 47899999753
No 28
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.64 E-value=4.9e-16 Score=151.98 Aligned_cols=101 Identities=25% Similarity=0.339 Sum_probs=83.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeecCCCCCeeceEEEEEccC-
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA----GAVVGRTFVISNSEDPVWQQHFYVPVAH- 420 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~----g~~~~rTkVi~nt~nPvWNE~F~f~v~~- 420 (1149)
.|.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+..
T Consensus 17 ~~~L~v~v~~a~~L~~~d~~~~---------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~ 81 (129)
T 2bwq_A 17 GHQLIVTILGAKDLPSREDGRP---------------RNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 81 (129)
T ss_dssp TTEEEEEEEEEESCCCCTTSCC---------------BCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCG
T ss_pred CCEEEEEEEEeeCCCCCCCCCC---------------CCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCH
Confidence 4789999999999999988776 8999999992 3344699999999999999999999532
Q ss_pred ---CCceEEEEEEEccCCC---CcceeeEEEeceeeccCCceeeeEee
Q 001126 421 ---SAAEVHFFVKDSDVVG---SELIGTVAIPVEQIYSGGKVEGTYPV 462 (1149)
Q Consensus 421 ---~~~~L~~~V~D~D~~~---ddfIG~v~Ipl~~L~~G~~~~~W~pL 462 (1149)
....|.|+|||+|..+ +++||++.|++.++.... .+.||+|
T Consensus 82 ~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L 128 (129)
T 2bwq_A 82 REFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKL 128 (129)
T ss_dssp GGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEEC
T ss_pred HHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEEC
Confidence 2378999999999865 899999999999988644 7899998
No 29
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.64 E-value=3.8e-16 Score=154.93 Aligned_cols=106 Identities=24% Similarity=0.318 Sum_probs=89.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeecCCCCCeeceEEEEEccC-
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA----GAVVGRTFVISNSEDPVWQQHFYVPVAH- 420 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~----g~~~~rTkVi~nt~nPvWNE~F~f~v~~- 420 (1149)
.|.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+..
T Consensus 20 ~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~ 84 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSREDGRP---------------RNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHR 84 (141)
T ss_dssp TTEEEEEEEEEESCCCCSSSCC---------------CCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCT
T ss_pred CCEEEEEEEEccCCCCcCCCCC---------------CCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCH
Confidence 4689999999999999988776 8999999993 2344699999999999999999999532
Q ss_pred C---CceEEEEEEEccCCC---CcceeeEEEeceeeccCCceeeeEeeccCCC
Q 001126 421 S---AAEVHFFVKDSDVVG---SELIGTVAIPVEQIYSGGKVEGTYPVLNGSG 467 (1149)
Q Consensus 421 ~---~~~L~~~V~D~D~~~---ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~G 467 (1149)
. ...|.|+|||+|..+ +++||++.|++.++.... .+.||+|...+.
T Consensus 85 ~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~~ 136 (141)
T 1v27_A 85 REFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHDS 136 (141)
T ss_dssp TGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCSS
T ss_pred HHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECccccc
Confidence 2 378999999999865 889999999999987554 789999986543
No 30
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.64 E-value=4.2e-16 Score=161.00 Aligned_cols=106 Identities=20% Similarity=0.285 Sum_probs=92.2
Q ss_pred eceEEEEEEEEeeCCCCCCC-CCccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeecCCCCCeeceEEEEEcc
Q 001126 345 LHGNLDIWIYSAKNLPNMDM-FHKTLGGMFNSQMNTKITSDPYVTIAVAG--A--VVGRTFVISNSEDPVWQQHFYVPVA 419 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~-~g~~~~~~~~k~~~~~~~sDPYV~V~l~g--~--~~~rTkVi~nt~nPvWNE~F~f~v~ 419 (1149)
..|.|.|+|++|++|+.+|. .+. +||||+|.+.. . ..+||+|+++++||+|||+|.|.+.
T Consensus 28 ~~~~L~V~v~~a~~L~~~d~~~g~---------------~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 92 (171)
T 2q3x_A 28 KKGQLEVEVIRARSLTQKPGSKST---------------PAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDES 92 (171)
T ss_dssp ETTEEEEEEEEEESCCCCC---CC---------------CEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSC
T ss_pred CCCEEEEEEEEeeCCCCCCcCCCC---------------CCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEec
Confidence 57899999999999999885 565 89999999853 2 3569999999999999999999997
Q ss_pred CCCceEEEEEE-EccCC-CCcceeeEEEeceeeccCCceeeeEeeccC
Q 001126 420 HSAAEVHFFVK-DSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 420 ~~~~~L~~~V~-D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~ 465 (1149)
.....|.|+|| |+|.. .+++||++.|++.++..+...+.||+|...
T Consensus 93 ~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 93 PQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp CTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 66789999999 99985 578999999999999988888999999754
No 31
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.63 E-value=4.2e-16 Score=156.62 Aligned_cols=108 Identities=15% Similarity=0.252 Sum_probs=90.5
Q ss_pred ceEEEEEEEEeeCCCCCC-CCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCCCCCeeceEEEEEccC
Q 001126 346 HGNLDIWIYSAKNLPNMD-MFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D-~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g----~~~~rTkVi~nt~nPvWNE~F~f~v~~ 420 (1149)
.|.|.|+|++|++|+.+| ..+. +||||+|.+.. ....||++++++.||+|||+|.|.+..
T Consensus 22 ~~~L~V~v~~a~~L~~~d~~~~~---------------~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 86 (148)
T 3fdw_A 22 TQSLVVHVKECHQLAYADEAKKR---------------SNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPE 86 (148)
T ss_dssp TTEEEEEEEEEESCCCSBTTTTB---------------CCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCS
T ss_pred CCEEEEEEEEecCCCCcccCCCC---------------CCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeCh
Confidence 578999999999999887 4555 89999999963 224599999999999999999999876
Q ss_pred C---CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCCCC
Q 001126 421 S---AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGK 468 (1149)
Q Consensus 421 ~---~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk 468 (1149)
. ...|.|+|||+|.. .+++||++.|+|.++..+...+.||+|..+.+.
T Consensus 87 ~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~~ 138 (148)
T 3fdw_A 87 SLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKISA 138 (148)
T ss_dssp TTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC---
T ss_pred hHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCcccc
Confidence 4 35799999999985 488999999999999887778899999765444
No 32
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.63 E-value=2.5e-16 Score=160.51 Aligned_cols=103 Identities=20% Similarity=0.272 Sum_probs=89.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC---E--EEeeeeeecCCCCCeeceEEEEEccC
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG---A--VVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g---~--~~~rTkVi~nt~nPvWNE~F~f~v~~ 420 (1149)
.|.|.|+|++|++|+.+|..|. +||||+|.+.. . ...||+|+++|+||+|||+|.|.+..
T Consensus 42 ~~~L~V~Vi~a~~L~~~d~~g~---------------sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 42 NKQFAILIIQLSNLSALLQQQD---------------QKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp TTEEEEEEEEEECGGGTCCSCC---------------SEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred CCEEEEEEEEccCcCCcccCCC---------------CCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 4689999999999999998776 89999999964 2 24699999999999999999999865
Q ss_pred C---CceEEEEEEEccCC-CCcceeeEEEeceeec-cCCceeeeEeec
Q 001126 421 S---AAEVHFFVKDSDVV-GSELIGTVAIPVEQIY-SGGKVEGTYPVL 463 (1149)
Q Consensus 421 ~---~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~-~G~~~~~W~pL~ 463 (1149)
. ...|+|+|||+|.. ++++||++.|++.++. .+...+.||+|+
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 3 36899999999985 5889999999999996 466778999995
No 33
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.63 E-value=8.2e-16 Score=151.76 Aligned_cols=105 Identities=25% Similarity=0.377 Sum_probs=91.3
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeecCCCCCeeceEEEEEccC
Q 001126 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA----GAVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~----g~~~~rTkVi~nt~nPvWNE~F~f~v~~ 420 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+. +....||++++++.||+|||+|.|.+..
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~~~~---------------~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 78 (137)
T 3rdl_A 14 TDEKLHVTVRDAKNLIPMDPNGL---------------SDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKP 78 (137)
T ss_dssp ETTEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCG
T ss_pred cCCEEEEEEEEeeCCCCCCCCCC---------------CCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCc
Confidence 56899999999999999988776 8999999994 3344699999999999999999999865
Q ss_pred C--CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccC
Q 001126 421 S--AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 421 ~--~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~ 465 (1149)
. ...|.|+|||+|.. .+++||++.|++.+|..+. .+.||+|.+.
T Consensus 79 ~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 79 SDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred hhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 4 35799999999985 5889999999999998765 7899999764
No 34
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=2e-15 Score=167.22 Aligned_cols=127 Identities=24% Similarity=0.316 Sum_probs=107.5
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeecCCCCCeeceEEEEEccCC-
Q 001126 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--AVVGRTFVISNSEDPVWQQHFYVPVAHS- 421 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g--~~~~rTkVi~nt~nPvWNE~F~f~v~~~- 421 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+.. ....||++++++.||+|||+|.|.+...
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~---------------~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~ 81 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGT---------------SDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSE 81 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSS---------------CCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGG
T ss_pred CCCEEEEEEEEeeCCCCCCCCCC---------------CCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHH
Confidence 35789999999999999988776 89999999953 2345999999999999999999998653
Q ss_pred --CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCCCCCCCCCceeEEEEEeeccc
Q 001126 422 --AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPME 486 (1149)
Q Consensus 422 --~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~p~~ 486 (1149)
...|+|+|+|+|.. .+++||++.|++.++..+...+.|++|....+......|+|.+.++|.|..
T Consensus 82 ~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~ 149 (284)
T 2r83_A 82 LAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTA 149 (284)
T ss_dssp CTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTT
T ss_pred hCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcC
Confidence 37899999999985 589999999999999988888999999876543334557999999998754
No 35
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=1.3e-15 Score=151.61 Aligned_cols=102 Identities=15% Similarity=0.172 Sum_probs=87.4
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE---CCEEEeeeeeecCCCCCeeceEEEEEccCC-
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV---AGAVVGRTFVISNSEDPVWQQHFYVPVAHS- 421 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l---~g~~~~rTkVi~nt~nPvWNE~F~f~v~~~- 421 (1149)
.|.|.|+|++|+ ++|..+. +||||+|.+ ++....||+|+++++||+|||+|.|.+...
T Consensus 25 ~~~L~V~v~~a~---~~d~~g~---------------sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~ 86 (138)
T 1wfm_A 25 KAELFVTRLEAV---TSNHDGG---------------CDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEE 86 (138)
T ss_dssp TTEEEEEEEEEE---CCCCSSC---------------CCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTS
T ss_pred CCEEEEEEEEEE---cCCCCCC---------------cceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHH
Confidence 468999999999 3676665 899999999 344456999999999999999999998654
Q ss_pred --CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccC
Q 001126 422 --AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNG 465 (1149)
Q Consensus 422 --~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~ 465 (1149)
...|+|+|||+|.. .+++||++.|+|.++..+...+.|++|...
T Consensus 87 l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 87 LPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp STTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred cCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 36899999999985 588999999999999877778899999754
No 36
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=8.6e-16 Score=153.03 Aligned_cols=107 Identities=22% Similarity=0.257 Sum_probs=89.4
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeecCCCCCeeceEEEEEccCC
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--A--VVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g--~--~~~rTkVi~nt~nPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..+ +||||+|.+.. . ...||++++++.||+|||+|.|.+...
T Consensus 23 ~~~L~v~v~~a~~L~~~d~~g----------------~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 86 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSEDG----------------SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLP 86 (142)
T ss_dssp TTEEEEEEEEEECCCCSSTTC----------------CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHH
T ss_pred CCEEEEEEEEeECCCCCCCCC----------------CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHH
Confidence 468999999999999887654 69999999942 2 345999999999999999999998643
Q ss_pred ---CceEEEEEEEccCCC---CcceeeEEEeceeeccCCceeeeEeeccCCCC
Q 001126 422 ---AAEVHFFVKDSDVVG---SELIGTVAIPVEQIYSGGKVEGTYPVLNGSGK 468 (1149)
Q Consensus 422 ---~~~L~~~V~D~D~~~---ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk 468 (1149)
...|.|+|||+|..+ +++||++.|++.++..+...+.|++|....++
T Consensus 87 ~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~~ 139 (142)
T 2dmg_A 87 EVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSGP 139 (142)
T ss_dssp HHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCSC
T ss_pred HhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCCC
Confidence 258999999999854 46999999999999877778899999765443
No 37
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.61 E-value=1.5e-15 Score=151.36 Aligned_cols=105 Identities=24% Similarity=0.344 Sum_probs=90.6
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCCCCCeeceEEEEE-cc
Q 001126 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVP-VA 419 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g----~~~~rTkVi~nt~nPvWNE~F~f~-v~ 419 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+.+ ....||++++++.||+|||+|.|. +.
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~ 91 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGL---------------ADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGIT 91 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSC---------------CCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCC
T ss_pred CCCEEEEEEEEecCCCCCCCCCC---------------CCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccC
Confidence 45789999999999999988776 89999999975 244699999999999999999998 54
Q ss_pred CC---CceEEEEEEEccCCC-CcceeeEEEeceeeccCCceeeeEeecc
Q 001126 420 HS---AAEVHFFVKDSDVVG-SELIGTVAIPVEQIYSGGKVEGTYPVLN 464 (1149)
Q Consensus 420 ~~---~~~L~~~V~D~D~~~-ddfIG~v~Ipl~~L~~G~~~~~W~pL~~ 464 (1149)
.. ...|+|+|||+|..+ +++||++.|++.+|..+.....|++|..
T Consensus 92 ~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 92 EEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp HHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred HHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 32 268999999999864 7899999999999998888888998853
No 38
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.60 E-value=1.3e-15 Score=153.76 Aligned_cols=108 Identities=22% Similarity=0.330 Sum_probs=86.3
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEE--EeeeeeecCCCCCeeceEEEEEccC
Q 001126 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAV--VGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~g~~--~~rTkVi~nt~nPvWNE~F~f~v~~ 420 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+ ++.. ..||+++++++||+|||+|.|.+..
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 92 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGL---------------SDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPC 92 (153)
T ss_dssp TTTEEEEEEEEEESCC------C---------------CCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCS
T ss_pred CCCEEEEEEEEeECCCCcCCCCC---------------CCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCH
Confidence 35789999999999999888776 899999999 5543 4599999999999999999999876
Q ss_pred CC---ceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCCCCC
Q 001126 421 SA---AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKP 469 (1149)
Q Consensus 421 ~~---~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~ 469 (1149)
.. ..|+|+|||+|.. .+++||++.|++.+ .+...+.|++|++..+++
T Consensus 93 ~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~p~~~ 143 (153)
T 1w15_A 93 ESLEEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICDFPRRQ 143 (153)
T ss_dssp SSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHHSTTCC
T ss_pred HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHhCCCCe
Confidence 52 6799999999985 58899999999988 345567899998766654
No 39
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.60 E-value=3.6e-15 Score=147.91 Aligned_cols=105 Identities=24% Similarity=0.365 Sum_probs=87.9
Q ss_pred eceEEEEEEEEeeCCCCCCCC-CccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeecCCCCCeeceEEEEE-ccC
Q 001126 345 LHGNLDIWIYSAKNLPNMDMF-HKTLGGMFNSQMNTKITSDPYVTIAVAG--AVVGRTFVISNSEDPVWQQHFYVP-VAH 420 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~-g~~~~~~~~k~~~~~~~sDPYV~V~l~g--~~~~rTkVi~nt~nPvWNE~F~f~-v~~ 420 (1149)
..|.|.|+|++|++|+.+|.. +. +||||+|.+.. ....||++++++.||+|||+|.|. +..
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~---------------~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~ 84 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMT---------------SDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPY 84 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTB---------------CEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCC---------------CCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCH
Confidence 357899999999999999875 55 89999999953 345699999999999999999996 654
Q ss_pred C---CceEEEEEEEccCC-CCcceeeEEEeceeeccCC-ceeeeEeecc
Q 001126 421 S---AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGG-KVEGTYPVLN 464 (1149)
Q Consensus 421 ~---~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~-~~~~W~pL~~ 464 (1149)
. ...|.|+|||+|.. .+++||++.|+|.+|..+. ....|++|..
T Consensus 85 ~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 85 TQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp TTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred HHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 3 36899999999985 5889999999999998763 4467799864
No 40
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.59 E-value=8.8e-16 Score=151.55 Aligned_cols=108 Identities=19% Similarity=0.301 Sum_probs=91.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCCCCCeeceEEEEEccCC
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g----~~~~rTkVi~nt~nPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..+. +||||+|.+.+ ...+||++++++.||+|||+|.|.+...
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~g~---------------~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~ 79 (138)
T 3n5a_A 15 ANSIIVNIIKARNLKAMDIGGT---------------SDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTE 79 (138)
T ss_dssp TTEEEEEEEEEESCCCCBTTTB---------------CCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGG
T ss_pred CCeEEEEEEEeeCCCCcCCCCC---------------cCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChh
Confidence 4789999999999999888776 89999999964 2446999999999999999999998655
Q ss_pred C---ceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCCCCCC
Q 001126 422 A---AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPC 470 (1149)
Q Consensus 422 ~---~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~ 470 (1149)
. ..|.|+|||+|.. .+++||++.|++.++.. ..+.|++|+...+++.
T Consensus 80 ~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~--~~~~W~~l~~~~~~~~ 130 (138)
T 3n5a_A 80 KLRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPG--EVKHWKDMIARPRQPV 130 (138)
T ss_dssp GGGGEEEEEEEEECCSSSCCEEEEEEEESSSSCHH--HHHHHHHHHHSTTCCE
T ss_pred hcCceEEEEEEEECCCCCCCcEEEEEEEccccCCh--HHHHHHHHHhCCCCeE
Confidence 4 6799999999985 58899999999997543 4568999988777643
No 41
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.59 E-value=4.7e-15 Score=146.92 Aligned_cols=116 Identities=20% Similarity=0.279 Sum_probs=81.5
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeec-CCCCCeeceEEEEEccCCCce
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVIS-NSEDPVWQQHFYVPVAHSAAE 424 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~-nt~nPvWNE~F~f~v~~~~~~ 424 (1149)
.|.|.|+|++|++|.. .+. +||||+|.. ... ||+++. ++.||+|||+|.|.+......
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~---------------~DPYv~v~~--~~~-kt~~~~~~t~nP~WnE~f~f~v~~~~~~ 62 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEK---------------FNTYVTLKV--QNV-KSTTIAVRGSQPSWEQDFMFEINRLDLG 62 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGG---------------CEEEEEEEE--TTE-EEECCCEESSSCEEEEEEEEEECCCSSE
T ss_pred ceEEEEEEEEeECCCC---CCC---------------cCeEEEEEe--cCE-EEeEecCCCCCceECCEEEEEEeCCCCe
Confidence 3789999999998852 344 899999992 222 555554 699999999999999877788
Q ss_pred EEEEEEEccCCCCcceeeEEEeceeeccCC------ceeeeEeeccCCCCCC----CCCceeEEEEEe
Q 001126 425 VHFFVKDSDVVGSELIGTVAIPVEQIYSGG------KVEGTYPVLNGSGKPC----KPGATLTLSIQY 482 (1149)
Q Consensus 425 L~~~V~D~D~~~ddfIG~v~Ipl~~L~~G~------~~~~W~pL~~~~Gk~~----~~~g~L~L~L~f 482 (1149)
|.|+|||+|..+|++||++.|+|++|.... ....|+.+..++|+.+ ..++.+.+.++|
T Consensus 63 L~~~V~D~d~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 63 LTVEVWNKGLIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EEEEEEECCSSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred EEEEEEECCCCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 999999999667899999999999986432 1123344443444432 234567777776
No 42
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.58 E-value=7.9e-15 Score=150.27 Aligned_cols=106 Identities=22% Similarity=0.341 Sum_probs=90.2
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeecCCCCCeeceEEEEEccCC
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG----AVVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g----~~~~rTkVi~nt~nPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..+. +||||+|.+.+ ....||++++++.||+|||+|.|.+...
T Consensus 36 ~~~L~V~v~~a~~L~~~d~~g~---------------~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 100 (166)
T 2cm5_A 36 QGGLIVGIIRCVHLAAMDANGY---------------SDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHS 100 (166)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGG
T ss_pred CCEEEEEEEEeECCCCccCCCC---------------CCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchH
Confidence 5789999999999999988776 89999999975 2456999999999999999999998653
Q ss_pred ---CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCCCC
Q 001126 422 ---AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGK 468 (1149)
Q Consensus 422 ---~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk 468 (1149)
...|.|+|||+|.. .+++||++.|++.++. ...+.|++|+...++
T Consensus 101 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~W~~l~~~~~~ 149 (166)
T 2cm5_A 101 DLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWYECLKNKDK 149 (166)
T ss_dssp GGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH--HHHHHHHHHHHCTTC
T ss_pred hcCCCEEEEEEEECCCCCCCcEEEeEEEecccCC--chhHHHHHHHhCCCC
Confidence 35899999999986 5889999999999864 345678888766655
No 43
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.58 E-value=7.6e-15 Score=149.22 Aligned_cols=91 Identities=30% Similarity=0.399 Sum_probs=78.9
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeecCCCCCeeceEEEEEccC
Q 001126 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--A--VVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g--~--~~~rTkVi~nt~nPvWNE~F~f~v~~ 420 (1149)
..|.|.|+|++|++|+.+|..+. +||||+|.+.. . ..+||++++++.||+|||+|.|.+..
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~---------------~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 87 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGL---------------SDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPF 87 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CCCEEEEEEEEeeCCCCccCCCC---------------CCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCH
Confidence 35789999999999999998776 89999999952 2 34699999999999999999999865
Q ss_pred C---CceEEEEEEEccCC-CCcceeeEEEeceee
Q 001126 421 S---AAEVHFFVKDSDVV-GSELIGTVAIPVEQI 450 (1149)
Q Consensus 421 ~---~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L 450 (1149)
. ...|.|+|||+|.. .+++||++.|++..+
T Consensus 88 ~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 88 EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred HHhCCcEEEEEEEECCCCCCCceEEEEEECCCCC
Confidence 4 35799999999985 588999999999865
No 44
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=2.5e-15 Score=150.63 Aligned_cols=109 Identities=19% Similarity=0.248 Sum_probs=87.5
Q ss_pred ceEEEEEEEEeeCCCCC-CCCCccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeecCCCCCeeceEEEEEccCC-
Q 001126 346 HGNLDIWIYSAKNLPNM-DMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--AVVGRTFVISNSEDPVWQQHFYVPVAHS- 421 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~-D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g--~~~~rTkVi~nt~nPvWNE~F~f~v~~~- 421 (1149)
.|.|.|+|++|++|+.. |..|. .+. ...+||||+|.+.. ....||+|++++.||+|||+|.|.+...
T Consensus 25 ~~~L~V~v~~a~~L~~~~d~~g~--~~~-------~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 95 (147)
T 2enp_A 25 HNHLTVRVIEARDLPPPISHDGS--RQD-------MAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLE 95 (147)
T ss_dssp TTEEEEEEEEEECCCCSCSSCCS--SCT-------TCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHH
T ss_pred CCEEEEEEEEEeCCCCccccccc--ccc-------CCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHH
Confidence 57899999999999983 54431 000 01289999999963 2346999999999999999999998653
Q ss_pred --CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeec
Q 001126 422 --AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVL 463 (1149)
Q Consensus 422 --~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~ 463 (1149)
...|+|+|||+|.. .+++||++.|+|.++..+...+.|++|.
T Consensus 96 l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~ 140 (147)
T 2enp_A 96 AQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALI 140 (147)
T ss_dssp HHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCB
T ss_pred hccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEee
Confidence 35899999999985 5789999999999998776677899996
No 45
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.53 E-value=4.1e-14 Score=142.64 Aligned_cols=133 Identities=17% Similarity=0.214 Sum_probs=103.6
Q ss_pred hHHHHHHHHHHHhccceEEEEeeccceeeEEeCCCCchHHHHHHHHHHHHhcCCeEEEEEecCCCccccccccccccccc
Q 001126 545 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDGVMQT 624 (1149)
Q Consensus 545 ~~f~al~eAI~~Ak~sI~I~~W~~~p~i~L~r~~~~~~g~rL~dlL~~kA~rGVkVrILVwD~~gs~~~~g~k~~g~m~~ 624 (1149)
+.++.++++|++|+++|+|+.|.|. + ..|.++|.+|++|||+||||+ |...... .
T Consensus 14 ~~~~~~~~~i~~A~~~I~i~~~~~~-------~------~~i~~aL~~a~~rGV~Vril~-~~~~~~~-----------~ 68 (155)
T 1byr_A 14 SARVLVLSAIDSAKTSIRMMAYSFT-------A------PDIMKALVAAKKRGVDVKIVI-DERGNTG-----------R 68 (155)
T ss_dssp HHHHHHHHHHHHCSSEEEEEESSBC-------C------HHHHHHHHHHHHTTCEEEEEE-ESTTCCS-----------H
T ss_pred cHHHHHHHHHHHHhhEEEEEEEEeC-------C------HHHHHHHHHHHHCCCEEEEEE-eCccccc-----------c
Confidence 5689999999999999999998652 1 579999999999999999997 5543210 0
Q ss_pred ccHHHHHHhccCCcEEEEccCccccccccccccccccccccccceEEecCCCCCCCccEEEEEcccccCCCCCCCCCCCc
Q 001126 625 HDEETRRVFKHSSVKVLLCPRIAGKRHSWAKQKEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGRYDNPHHPL 704 (1149)
Q Consensus 625 ~~~~t~~~l~~~gV~v~l~p~~~~~~~~~~~~~~~~~~~rHHQKiVVVD~~~~~~~r~~vAFVGGiNL~dgRwDt~~H~l 704 (1149)
......+.|.+.|++++.+.. ...+|.|++|||++ ++++||.|++...+
T Consensus 69 ~~~~~~~~L~~~gv~v~~~~~----------------~~~~H~K~~iiD~~--------~~~iGS~N~~~~~~------- 117 (155)
T 1byr_A 69 ASIAAMNYIANSGIPLRTDSN----------------FPIQHDKVIIVDNV--------TVETGSFNFTKAAE------- 117 (155)
T ss_dssp HHHHHHHHHHHTTCCEEEECS----------------SSCCCCCEEEETTT--------EEEEESCCBSHHHH-------
T ss_pred ccHHHHHHHHHCCCeEEEcCC----------------cccccceEEEECCC--------EEEEECCCCCcccc-------
Confidence 112345556778999887632 12589999999997 99999999986311
Q ss_pred cccccccCCCCCCCCccccCCCCCCCCCCeeeeeeEEcCH--HHHHHHHHHHHHHHhh
Q 001126 705 FRTLQTLHKDDYHNPTFTQGNTTGCPREPWHDLHSKIDGP--AAYDVLTNFEERWRKA 760 (1149)
Q Consensus 705 ~~~~~~~~~~Dy~np~~~~~~~~~~pr~PWHDv~vrI~GP--aa~Dl~~~F~qrWn~~ 760 (1149)
..|++..+.|+|+ .+.++...|.+.|+.+
T Consensus 118 ---------------------------~~n~E~~~~i~~~~~l~~~~~~~f~~~w~~~ 148 (155)
T 1byr_A 118 ---------------------------TKNSENAVVIWNMPKLAESFLEHWQDRWNQG 148 (155)
T ss_dssp ---------------------------HTSCEEEEEEESCHHHHHHHHHHHHHHHHTC
T ss_pred ---------------------------ccCcccEEEEcCcHHHHHHHHHHHHHHHHhC
Confidence 1467899999993 8999999999999875
No 46
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.53 E-value=3.2e-14 Score=141.57 Aligned_cols=116 Identities=16% Similarity=0.310 Sum_probs=103.5
Q ss_pred EEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeec-CCCCCeeceEEEEEccCC---Cc
Q 001126 348 NLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVIS-NSEDPVWQQHFYVPVAHS---AA 423 (1149)
Q Consensus 348 tL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~-nt~nPvWNE~F~f~v~~~---~~ 423 (1149)
.|+|+|.+|++|+ ++ +|||++|.+.+.+. |||+++ ++.||+|||.|.|++..+ ..
T Consensus 22 sL~V~l~~a~~Lp-----g~---------------~Dp~akv~FRg~k~-kTkvi~~~~~npvfnE~F~wpl~~~ld~~e 80 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GR---------------ADRIAKVTFRGQSF-YSRVLENCEDVADFDETFRWPVASSIDRNE 80 (144)
T ss_dssp EEEEEEEEEESCC-----SC---------------EEEEEEEEETTEEE-ECCCEEEECSCEEEEEEEEEEESSCCCTTC
T ss_pred EEEEEEEEecCCC-----CC---------------CCCeEEEEEeccce-eeEEeccCCCCceEcceEEecCCCCCCCCC
Confidence 3999999999999 33 89999999998885 999998 699999999999998765 37
Q ss_pred eEEEEEEEccC-CCCcceeeEEEeceeeccCCceeeeEeeccCCCCCCCCCceeEEEEEeeccc
Q 001126 424 EVHFFVKDSDV-VGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPME 486 (1149)
Q Consensus 424 ~L~~~V~D~D~-~~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~p~~ 486 (1149)
.|.|.|+|++. .++++||++.|+|.++..+.....+.+|++.++++.+ +.|.|.|+|.|.+
T Consensus 81 ~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~--a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 81 VLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIK--TSLSMEVRYQAAD 142 (144)
T ss_dssp EEEEEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEE--EEEEEEEEEEETT
T ss_pred EEEEEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCccc--cEEEEEEEecCCC
Confidence 89999999998 4688999999999999987777888999999999865 7999999999865
No 47
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.50 E-value=6.8e-14 Score=141.03 Aligned_cols=119 Identities=19% Similarity=0.136 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCCchh
Q 001126 841 SIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAAT 920 (1149)
Q Consensus 841 sI~~ayl~aI~~Ak~fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rgv~V~IVlP~~Peg~p~~~s~ 920 (1149)
++.++++++|++|+++|+|+++||. + ..+..+|.+|. ++||+|+||++.....
T Consensus 14 ~~~~~~~~~i~~A~~~I~i~~~~~~-~-----------------~~i~~aL~~a~--~rGV~Vril~~~~~~~------- 66 (155)
T 1byr_A 14 SARVLVLSAIDSAKTSIRMMAYSFT-A-----------------PDIMKALVAAK--KRGVDVKIVIDERGNT------- 66 (155)
T ss_dssp HHHHHHHHHHHHCSSEEEEEESSBC-C-----------------HHHHHHHHHHH--HTTCEEEEEEESTTCC-------
T ss_pred cHHHHHHHHHHHHhhEEEEEEEEeC-C-----------------HHHHHHHHHHH--HCCCEEEEEEeCcccc-------
Confidence 6889999999999999999998883 2 24666777664 5899999999975321
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCchhhhhcccCcccceee
Q 001126 921 QRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVH 1000 (1149)
Q Consensus 921 ~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~~Yl~f~~Lr~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~iYVH 1000 (1149)
.+ .....++.|.+.|+++++.. ....+|
T Consensus 67 ----~~-------~~~~~~~~L~~~gv~v~~~~-----------------------------------------~~~~~H 94 (155)
T 1byr_A 67 ----GR-------ASIAAMNYIANSGIPLRTDS-----------------------------------------NFPIQH 94 (155)
T ss_dssp ----SH-------HHHHHHHHHHHTTCCEEEEC-----------------------------------------SSSCCC
T ss_pred ----cc-------ccHHHHHHHHHCCCeEEEcC-----------------------------------------Cccccc
Confidence 00 11246778889999876410 012679
Q ss_pred eEEEEEeCeEEEEcccccccCCCCCCCCcceEEEEeCc-ch
Q 001126 1001 SKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQP-EY 1040 (1149)
Q Consensus 1001 SKlmIVDD~~viIGSANiN~RSm~G~~DsEiav~i~dp-~~ 1040 (1149)
+|+|||||++++|||+||+.||+. .|.|+++.+.++ +.
T Consensus 95 ~K~~iiD~~~~~iGS~N~~~~~~~--~n~E~~~~i~~~~~l 133 (155)
T 1byr_A 95 DKVIIVDNVTVETGSFNFTKAAET--KNSENAVVIWNMPKL 133 (155)
T ss_dssp CCEEEETTTEEEEESCCBSHHHHH--TSCEEEEEEESCHHH
T ss_pred ceEEEECCCEEEEECCCCCccccc--cCcccEEEEcCcHHH
Confidence 999999999999999999999997 799999999984 54
No 48
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.50 E-value=3.4e-14 Score=152.05 Aligned_cols=153 Identities=13% Similarity=0.100 Sum_probs=106.6
Q ss_pred cchhhHHHHHHHHHHHhccceEEEEeeccceeeEEeCCCCchHHHHHHHHHHHHhcCCeEEEEEecCCCccccccccccc
Q 001126 541 YVHGKCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDDPTSRSILGYKMDG 620 (1149)
Q Consensus 541 y~~~~~f~al~eAI~~Ak~sI~I~~W~~~p~i~L~r~~~~~~g~rL~dlL~~kA~rGVkVrILVwD~~gs~~~~g~k~~g 620 (1149)
+...+.++.|+++|++||++|+|+.|.|. + ..|.++|++||+|||+||||+ |..++....
T Consensus 54 ~~~~~~~~~ii~~I~~A~~sI~i~~Y~~~-------~------~~I~~aL~~Aa~RGV~VRii~-D~~~~~~~~------ 113 (220)
T 4gel_A 54 HCSLRNVAKIVEQIDRAVYSIDLAIYTFT-------S------LFLADSIKRALQRGVIIRIIS-DGEMVYSKG------ 113 (220)
T ss_dssp TCHHHHHHHHHHHHHTCSSEEEEECSCBC-------C------HHHHHHHHHHHHHTCEEEEEC-CTTTTTSTT------
T ss_pred cCcHHHHHHHHHHHHHhhhEEEEEEEEeC-------C------HHHHHHHHHHHHcCCeEEEEE-echhhhhhH------
Confidence 44557899999999999999999998662 2 579999999999999999996 876542210
Q ss_pred ccccccHHHHHHhccCCcEEEEccCcccccccccc-c---cccccccccccceEEecCCCCCCCccEEEEEcccccCCCC
Q 001126 621 VMQTHDEETRRVFKHSSVKVLLCPRIAGKRHSWAK-Q---KEVGTIYTHHQKTVIVDADAGYNRRKIIAFVGGLDLCDGR 696 (1149)
Q Consensus 621 ~m~~~~~~t~~~l~~~gV~v~l~p~~~~~~~~~~~-~---~~~~~~~rHHQKiVVVD~~~~~~~r~~vAFVGGiNL~dgR 696 (1149)
.....+...++.+............++- + ...+...++|.|++|||++ ++++|+.|++..-
T Consensus 114 -------~~~~~~~~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~~--------~v~~GS~N~t~~s 178 (220)
T 4gel_A 114 -------SQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCYS--------IVISGSVNWTALG 178 (220)
T ss_dssp -------CHHHHHHHTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCCC--------EEEEESCCBSHHH
T ss_pred -------HHHHHHHhcCCcEEeecccccccceeEEEcchhcccccccccceeccccccc--------eEEecCccccccc
Confidence 1122334455555443221111111110 0 0112346788899999986 9999999987631
Q ss_pred CCCCCCCccccccccCCCCCCCCccccCCCCCCCCCCeeeeeeEEcCHHHHHHHHHHHHHHHhhc
Q 001126 697 YDNPHHPLFRTLQTLHKDDYHNPTFTQGNTTGCPREPWHDLHSKIDGPAAYDVLTNFEERWRKAS 761 (1149)
Q Consensus 697 wDt~~H~l~~~~~~~~~~Dy~np~~~~~~~~~~pr~PWHDv~vrI~GPaa~Dl~~~F~qrWn~~t 761 (1149)
. ...|.|+.+...|++|.++.+.|.+.|+...
T Consensus 179 ~---------------------------------~~N~E~~~vi~~~~~a~~~~~~F~~~W~~~~ 210 (220)
T 4gel_A 179 L---------------------------------GGNWENCIITADDKLTATFQAEFQRMWRAFA 210 (220)
T ss_dssp H---------------------------------HTSBEEEEEECCHHHHHHHHHHHHHHHHHSE
T ss_pred c---------------------------------ccCceEEEEEECHHHHHHHHHHHHHHHHhcc
Confidence 1 1368899999999999999999999999753
No 49
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.50 E-value=4.6e-14 Score=145.66 Aligned_cols=116 Identities=20% Similarity=0.274 Sum_probs=84.3
Q ss_pred eEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeec-CCCCCeeceEEEEEccCCCceE
Q 001126 347 GNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVIS-NSEDPVWQQHFYVPVAHSAAEV 425 (1149)
Q Consensus 347 GtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~-nt~nPvWNE~F~f~v~~~~~~L 425 (1149)
|.|.|+|++|++|.. .+. +||||+|.. +.. ||+++. ++.||+|||+|.|.+......|
T Consensus 14 ~~L~V~V~~A~~l~~---~g~---------------~DPYV~v~~--~~~-kt~~~~~~t~nP~WnE~f~f~v~~~~~~L 72 (167)
T 2cjs_A 14 SLLCVGVKKAKFDGA---QEK---------------FNTYVTLKV--QNV-ESTTIAVRGSQPSWEQDFMFEINRLDLGL 72 (167)
T ss_dssp CEEEEEEEEEECSSC---GGG---------------CEEEEEEEE--TTE-EEECCCEESSSCEEEEEEEEECCCTTSEE
T ss_pred EEEEEEEEEEECCCC---CCC---------------CCeEEEEEe--cce-EEEEecCCCCCCCCCCEEEEEeeCCCCEE
Confidence 569999999998852 344 899999992 222 676665 6999999999999998877889
Q ss_pred EEEEEEccCCCCcceeeEEEeceeeccCC------ceeeeEeeccCCCCCCC----CCceeEEEEEee
Q 001126 426 HFFVKDSDVVGSELIGTVAIPVEQIYSGG------KVEGTYPVLNGSGKPCK----PGATLTLSIQYT 483 (1149)
Q Consensus 426 ~~~V~D~D~~~ddfIG~v~Ipl~~L~~G~------~~~~W~pL~~~~Gk~~~----~~g~L~L~L~f~ 483 (1149)
.|+|||+|..+|++||++.|+|++|.... ....|+.+...+|+.++ ..+++++.++|.
T Consensus 73 ~~~V~D~d~~~dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e 140 (167)
T 2cjs_A 73 TVEVWNKGLIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFE 140 (167)
T ss_dssp EEEEEECCSSCCEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEE
T ss_pred EEEEEECCCCCCceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEee
Confidence 99999999667999999999999986432 11234444444544322 123456666653
No 50
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.50 E-value=7.9e-14 Score=156.03 Aligned_cols=124 Identities=26% Similarity=0.330 Sum_probs=99.4
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEEEeeeeeecCCCCCeeceEEEEEccCC--
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAVVGRTFVISNSEDPVWQQHFYVPVAHS-- 421 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~g~~~~rTkVi~nt~nPvWNE~F~f~v~~~-- 421 (1149)
.|.|.|+|++|++|+.+|..+. +||||+|.+ ++....||+|+++++||+|||+|.|.+...
T Consensus 19 ~~~L~v~v~~a~~L~~~d~~g~---------------~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l 83 (296)
T 1dqv_A 19 SDQLVVRILQALDLPAKDSNGF---------------SDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAEL 83 (296)
T ss_dssp SCEEEEEEEEEECCCCCSTTSC---------------CCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGG
T ss_pred CCEEEEEEEEeECCCCcCCCCC---------------cCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHh
Confidence 4689999999999999998776 899999999 333445999999999999999999998643
Q ss_pred -CceEEEEEEEccCC-CCcceeeEEEe-ceeecc-CCceeeeEeeccCCCCCCCCCceeEEEEEeecc
Q 001126 422 -AAEVHFFVKDSDVV-GSELIGTVAIP-VEQIYS-GGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPM 485 (1149)
Q Consensus 422 -~~~L~~~V~D~D~~-~ddfIG~v~Ip-l~~L~~-G~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~p~ 485 (1149)
...|+|+|||+|.. .+++||++.|+ +.++.. +...+.|++|....++. ...|+|++.+.|.|.
T Consensus 84 ~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 84 AQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEK-ADLGELNFSLCYLPT 150 (296)
T ss_dssp SSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCC-SCCCEEEEEEEEETT
T ss_pred cCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccc-cccceEEEEEEeccc
Confidence 25899999999985 58899999996 444443 34457899997654432 345799999998764
No 51
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.47 E-value=1.8e-13 Score=163.81 Aligned_cols=115 Identities=18% Similarity=0.276 Sum_probs=98.1
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeceEEEEEccCCC-ce
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHSA-AE 424 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~nt~nPvWNE~F~f~v~~~~-~~ 424 (1149)
.|+|.|+|++|++|+.+|..|. +||||+|.+++.. .||+|+.++.||+|||+|.|.+.... ..
T Consensus 386 ~~~l~v~v~~a~~L~~~d~~~~---------------sdpyv~v~~~~~~-~~T~~~~~t~nP~w~e~f~f~~~~~~~~~ 449 (510)
T 3jzy_A 386 IGRLMVHVIEATELKACKPNGK---------------SNPYCEISMGSQS-YTTRTIQDTLNPKWNFNCQFFIKDLYQDV 449 (510)
T ss_dssp CEEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEETTEE-EECCCCSSCSSCEEEEEEEEEESCTTTCE
T ss_pred CceEEEEeceeecCCCCCCCCC---------------CCeEEEEEECCee-ccCCccCCCCCCccCceEEEEecCCCCCE
Confidence 4689999999999999998876 8999999998876 49999999999999999999997664 67
Q ss_pred EEEEEEEccCC-CCcceeeEEEeceeeccCCc----eeeeEeeccCCCCCCCCCceeEEEEEe
Q 001126 425 VHFFVKDSDVV-GSELIGTVAIPVEQIYSGGK----VEGTYPVLNGSGKPCKPGATLTLSIQY 482 (1149)
Q Consensus 425 L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~----~~~W~pL~~~~Gk~~~~~g~L~L~L~f 482 (1149)
|+|+|||+|.. .|++||++.+++.+|..+.. .+.|++|.+. ..|+|+|.+.+
T Consensus 450 l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~~G~i~l~~~l 506 (510)
T 3jzy_A 450 LCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------PTGEVWVRFDL 506 (510)
T ss_dssp EEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------SSCEEEEEEEE
T ss_pred EEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC------CCceEEEEEEE
Confidence 99999999985 48899999999999986543 6789998532 23577777665
No 52
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.46 E-value=6.1e-15 Score=176.19 Aligned_cols=123 Identities=22% Similarity=0.364 Sum_probs=22.6
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCC---CCCeeceEEEEEccC
Q 001126 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNS---EDPVWQQHFYVPVAH 420 (1149)
Q Consensus 344 LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~nt---~nPvWNE~F~f~v~~ 420 (1149)
-..|.|+|+|++|++|+.+ .||||++.+++...+||+++++| .||+|||+|.|.+..
T Consensus 8 r~~~~L~V~VieAk~L~~~--------------------ddpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~ 67 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPK--------------------KRYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLP 67 (483)
T ss_dssp EEEECC-----------------------------------------------------------------CCEECC---
T ss_pred eeccEEEEEEEEcCCcCCC--------------------CCCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCC
Confidence 3457899999999999853 38999999999877899999999 999999999999765
Q ss_pred CCceEEEEEEEc-c----CCCCcceeeEEEeceeeccCCceeeeEeeccCCC---------------------CCCCCCc
Q 001126 421 SAAEVHFFVKDS-D----VVGSELIGTVAIPVEQIYSGGKVEGTYPVLNGSG---------------------KPCKPGA 474 (1149)
Q Consensus 421 ~~~~L~~~V~D~-D----~~~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~G---------------------k~~~~~g 474 (1149)
....|.|+|||. | ..+|++||++.|+++++..|...+.||+|.+.++ +..+.+|
T Consensus 68 ~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~G 147 (483)
T 3bxj_A 68 AVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGSGGKGKGGCP 147 (483)
T ss_dssp ---------------------------------------CCEECC-----------------------------------
T ss_pred CccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccccccCCCCCc
Confidence 568899999994 5 2678999999999999998888899999976543 1123457
Q ss_pred eeEEEEEeeccc
Q 001126 475 TLTLSIQYTPME 486 (1149)
Q Consensus 475 ~L~L~L~f~p~~ 486 (1149)
.|+|+++|.+..
T Consensus 148 ~lrL~v~~~~~~ 159 (483)
T 3bxj_A 148 AVRLKARYQTMS 159 (483)
T ss_dssp ---CEEEEEECC
T ss_pred eEEEEEEeeeee
Confidence 999999997753
No 53
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.46 E-value=1.2e-13 Score=146.11 Aligned_cols=118 Identities=16% Similarity=0.170 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCCchh
Q 001126 841 SIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAAT 920 (1149)
Q Consensus 841 sI~~ayl~aI~~Ak~fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rgv~V~IVlP~~Peg~p~~~s~ 920 (1149)
+....++++|++||+.|+|+. |++.+ .+|+.+|.+| ++|||+|+||+...-..
T Consensus 46 ~~~~~ll~~I~~A~~sI~i~~-y~~~~-----------------~~i~~aL~~a--a~rGV~Vrii~D~~~~~------- 98 (196)
T 4ggj_A 46 SSLSRLLRALLAARSSLELCL-FAFSS-----------------PQLGRAVQLL--HQRGVRVRVITDCDYMA------- 98 (196)
T ss_dssp CHHHHHHHHHHTCSSEEEEEE-SCBCC-----------------HHHHHHHHHH--HHTTCEEEEEESSCCC--------
T ss_pred HHHHHHHHHHHHhheEEEEEE-EEeCC-----------------HHHHHHHHHH--HHcCCcEEEEEeccccc-------
Confidence 456789999999999999998 55443 2577777776 46899999999642110
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCchhhhhcccCcccceee
Q 001126 921 QRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIYVH 1000 (1149)
Q Consensus 921 ~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~~Yl~f~~Lr~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~iYVH 1000 (1149)
...+.+..|.++|+++++.. ....+|
T Consensus 99 -------------~~~~~~~~l~~~gi~v~~~~-----------------------------------------~~~~~H 124 (196)
T 4ggj_A 99 -------------LNGSQIGLLRKAGIQVRHDQ-----------------------------------------DLGYMH 124 (196)
T ss_dssp ---------------CCHHHHHHHTTCEEEECC-----------------------------------------SSSCCC
T ss_pred -------------ccHHHHHHHHhcCCCccccc-----------------------------------------cccccc
Confidence 00123567889999876310 013579
Q ss_pred eEEEEEeCeEEEEcccccccCCCCCCCCcceEEEEeCcchh
Q 001126 1001 SKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 1001 SKlmIVDD~~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
+|+||||++++++||+||+.||+. .|.|..++++|++.+
T Consensus 125 ~K~~viD~~~~~~GS~N~t~~~~~--~n~E~~~~i~~~~~~ 163 (196)
T 4ggj_A 125 HKFAIVDKKVLITGSLNWTTQAIQ--NNRENVLIMEDTEYV 163 (196)
T ss_dssp CEEEEETTTEEEEESCCBCHHHHH--HCCEEEEEECCHHHH
T ss_pred CcEEEEcceEEEecCccCChhhhc--ccceeEEEEECHHHH
Confidence 999999999999999999999998 799999999988753
No 54
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.43 E-value=5.3e-13 Score=160.70 Aligned_cols=109 Identities=21% Similarity=0.258 Sum_probs=91.6
Q ss_pred eEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEeeeeeecCCCCCeeceEEEEEccC--CCce
Q 001126 347 GNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAH--SAAE 424 (1149)
Q Consensus 347 GtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~rTkVi~nt~nPvWNE~F~f~v~~--~~~~ 424 (1149)
|.|+|+|++|++|+. |.+|+ +||||+|.+++.+ .||+|+++++||+|||+|.|.+.. ....
T Consensus 394 ~~L~V~V~~A~~L~~-D~~g~---------------sDPYV~v~l~~~~-~kTkvik~tlNP~Wne~f~f~~~~~~~~~~ 456 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DYTTA---------------TDAYLKVFFGGQE-FRTGVVWNNNNPRWTDKMDFENVLLSTGGP 456 (540)
T ss_dssp EEEEEEEEEEESCCC-SSCSC---------------CCEEEEEEETTEE-EECCCBCSCSSCBCCCCEEEEEEETTTCCC
T ss_pred cEEEEEEEEccCCCc-ccCCC---------------cCeEEEEEECCEe-eeeeeecCCCCCCCCeEEEEEEecCCCCCE
Confidence 689999999999998 88886 9999999999977 699999999999999999998643 4578
Q ss_pred EEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCCCCCCCCCceeEEEEEeecc
Q 001126 425 VHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCKPGATLTLSIQYTPM 485 (1149)
Q Consensus 425 L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~p~ 485 (1149)
|+|+|||+|.. .|||||++.++|. .|. .+.|++|- .|.|+++++..=.
T Consensus 457 L~~~V~D~D~~~~dD~LG~~~~~L~---~g~-~~~~~~l~---------~G~l~~~~~~~c~ 505 (540)
T 3nsj_A 457 LRVQVWDADYGWDDDLLGSCDRSPH---SGF-HEVTCELN---------HGRVKFSYHAKCL 505 (540)
T ss_dssp EEEEEEECCSSSCCEEEEEEEECCC---SEE-EEEEEECS---------SSEEEEEEEEEEC
T ss_pred EEEEEEECCCCCCCCEEEEEEEEee---CCc-EEEEEEcC---------CeEEEEEEEEEEC
Confidence 99999999985 5789999999987 343 56788861 1478888775533
No 55
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.37 E-value=4.1e-13 Score=166.43 Aligned_cols=103 Identities=22% Similarity=0.366 Sum_probs=91.9
Q ss_pred ceEEEEEEEEeeCCCC---CCCCCccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeecCCCCCeeceEEEEEccC
Q 001126 346 HGNLDIWIYSAKNLPN---MDMFHKTLGGMFNSQMNTKITSDPYVTIAVAG--AVVGRTFVISNSEDPVWQQHFYVPVAH 420 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~---~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g--~~~~rTkVi~nt~nPvWNE~F~f~v~~ 420 (1149)
.|+|+|+|++|++|+. +|..|. +||||+|.+.+ ...+||+|+++++||+|||+|.|.+..
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~~g~---------------sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~ 81 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDMLDT---------------PDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDP 81 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHHHCC---------------CCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECT
T ss_pred ccEEEEEEEEEECCCCccccCCCCC---------------cCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecC
Confidence 4789999999999998 777665 89999999985 234599999999999999999999987
Q ss_pred C-CceEEEEEEEccCCCCcceeeEEEeceeeccCCceeeeEeec
Q 001126 421 S-AAEVHFFVKDSDVVGSELIGTVAIPVEQIYSGGKVEGTYPVL 463 (1149)
Q Consensus 421 ~-~~~L~~~V~D~D~~~ddfIG~v~Ipl~~L~~G~~~~~W~pL~ 463 (1149)
. ...|+|+|||+|..++++||++.|+|.+|..|...+.|++|.
T Consensus 82 ~~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~ 125 (749)
T 1cjy_A 82 NQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFN 125 (749)
T ss_dssp TSCCBCEEEEEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEET
T ss_pred CCCCEEEEEEEECCCCCCceeEEEEEEHHHcCCCCceEEEEecC
Confidence 4 578999999999977999999999999999888889999994
No 56
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.36 E-value=3.9e-12 Score=140.81 Aligned_cols=90 Identities=31% Similarity=0.437 Sum_probs=77.9
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC--CE--EEeeeeeecCCCCCeeceEEEEEccCC
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA--GA--VVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~--g~--~~~rTkVi~nt~nPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..+. +||||+|.+. +. ...||+|++++.||+|||+|.|.+...
T Consensus 149 ~~~l~v~v~~a~~L~~~d~~~~---------------~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 213 (284)
T 2r83_A 149 AGKLTVVILEAKNLKKMDVGGL---------------SDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFE 213 (284)
T ss_dssp TTEEEEEEEEEESCCCCSTTSC---------------CCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTT
T ss_pred CCceEEEEEEeECCCCcCCCCC---------------cCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHH
Confidence 4679999999999999998776 8999999984 33 346999999999999999999998755
Q ss_pred ---CceEEEEEEEccCC-CCcceeeEEEeceee
Q 001126 422 ---AAEVHFFVKDSDVV-GSELIGTVAIPVEQI 450 (1149)
Q Consensus 422 ---~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L 450 (1149)
...|.|+|||+|.. .+++||++.|++..+
T Consensus 214 ~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 214 QIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp TGGGEEEEEEEEECCSSSCCCEEEEEEEETTCC
T ss_pred HhCceEEEEEEEeCCCCCCCcEEEEEEECCCCC
Confidence 25799999999985 588999999999875
No 57
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.27 E-value=1.2e-12 Score=146.30 Aligned_cols=110 Identities=27% Similarity=0.353 Sum_probs=89.6
Q ss_pred ceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC--CE--EEeeeeeecCCCCCeeceEEEEEccCC
Q 001126 346 HGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA--GA--VVGRTFVISNSEDPVWQQHFYVPVAHS 421 (1149)
Q Consensus 346 hGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~--g~--~~~rTkVi~nt~nPvWNE~F~f~v~~~ 421 (1149)
.|.|.|+|++|++|+.+|..|. +||||+|.+. +. ...||++++++.||+|||+|.|.+...
T Consensus 151 ~~~l~v~v~~a~~L~~~d~~g~---------------~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~ 215 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDLTGF---------------SDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPE 215 (296)
T ss_dssp TTEEEEEEEEEESCCCCSSSSC---------------CCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSG
T ss_pred cceeEEEEEEeecCCccCCCCC---------------CCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHH
Confidence 4789999999999999998876 8999999996 32 345999999999999999999998754
Q ss_pred C---ceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCCCCCCC
Q 001126 422 A---AEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGSGKPCK 471 (1149)
Q Consensus 422 ~---~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~Gk~~~ 471 (1149)
. ..|.|+|||+|.. .+++||++.|++.++.. ...++|++|+...+++..
T Consensus 216 ~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~-~~~~~W~~~~~~~~~~~~ 268 (296)
T 1dqv_A 216 SVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP-HGREHWAEMLANPRKPVE 268 (296)
T ss_dssp GGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH-HHHHHHHTSSSSSSSCSC
T ss_pred HccCcEEEEEEEeCCCCCCCceEEEEEECCccCCc-hhHHHHHHHHhCCCCcee
Confidence 2 5799999999986 58899999999987643 134678777765565543
No 58
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.13 E-value=1.1e-10 Score=143.81 Aligned_cols=119 Identities=21% Similarity=0.236 Sum_probs=89.7
Q ss_pred HHHHHHHHhhcc-----EEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCCc
Q 001126 844 TAYVKAIRSAQH-----FIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGA 918 (1149)
Q Consensus 844 ~ayl~aI~~Ak~-----fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rgv~V~IVlP~~Peg~p~~~ 918 (1149)
++++++|++|++ .|+| ++||+... ..++.+|++| +++|++|+||++...... ...
T Consensus 350 ~~v~~~I~~A~~dp~v~~I~i-t~Y~~~~d----------------~~I~~AL~~A--A~rGV~VrVLvd~~a~~~-~~~ 409 (687)
T 1xdp_A 350 EHVLELLRQASFDPSVLAIKI-NIYRVAKD----------------SRIIDSMIHA--AHNGKKVTVVVELQARFD-EEA 409 (687)
T ss_dssp HHHHHHHHHHHHCTTEEEEEE-EESSCCTT----------------CHHHHHHHHH--HHTTCEEEEEECTTCSST-TTT
T ss_pred hhHHHHHHHHhhCCcceEEEE-EeeeecCc----------------HHHHHHHHHH--HhcCCEEEEEECCCcccc-hhh
Confidence 468899999997 9999 99999432 1567777776 468999999999864110 000
Q ss_pred hhHHHHHHHHhhhhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCchhhhhcccCcccce
Q 001126 919 ATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMIY 998 (1149)
Q Consensus 919 s~~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~~Yl~f~~Lr~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~iY 998 (1149)
....++.|.++|+++++.- ....
T Consensus 410 ----------------n~~~~~~L~~aGV~V~~~~-----------------------------------------~~~k 432 (687)
T 1xdp_A 410 ----------------NIHWAKRLTEAGVHVIFSA-----------------------------------------PGLK 432 (687)
T ss_dssp ----------------TTTTTHHHHHHTCEEEECC-----------------------------------------TTCE
T ss_pred ----------------HHHHHHHHHHCCCEEEEec-----------------------------------------CCcc
Confidence 1135688999999986410 0124
Q ss_pred eeeEEEEEe----CeE---EEEcccccccCCCCCCCCcceEEEEeCcchh
Q 001126 999 VHSKGMIVD----DEY---VILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 999 VHSKlmIVD----D~~---viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
+|+|+|||| |++ +.|||+|+|.||+. .++|+++.+.+++.+
T Consensus 433 ~H~Ki~VID~re~~~i~~~a~iGS~N~d~rs~~--~n~D~~l~i~~~~i~ 480 (687)
T 1xdp_A 433 IHAKLFLISRKENGEVVRYAHIGTGNFNEKTAR--LYTDYSLLTADARIT 480 (687)
T ss_dssp ECCEEEEEEEEETTEEEEEEEEESSCSCTTGGG--TEEEEEEEECCHHHH
T ss_pred ccceEEEEEeccCCeEEEEEEEeCCcCCcchhh--hcceEEEEEeCHHHH
Confidence 899999999 454 99999999999998 899999999988643
No 59
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.11 E-value=1.9e-10 Score=122.99 Aligned_cols=135 Identities=17% Similarity=0.019 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCCchh
Q 001126 841 SIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTGAAT 920 (1149)
Q Consensus 841 sI~~ayl~aI~~Ak~fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rgv~V~IVlP~~Peg~p~~~s~ 920 (1149)
...+.++++|.+||+.|+|+. |++++ .+|+.+|.+| ++|||+|+||+....... .
T Consensus 58 ~~~~~ii~~I~~A~~sI~i~~-Y~~~~-----------------~~I~~aL~~A--a~RGV~VRii~D~~~~~~----~- 112 (220)
T 4gel_A 58 RNVAKIVEQIDRAVYSIDLAI-YTFTS-----------------LFLADSIKRA--LQRGVIIRIISDGEMVYS----K- 112 (220)
T ss_dssp HHHHHHHHHHHTCSSEEEEEC-SCBCC-----------------HHHHHHHHHH--HHHTCEEEEECCTTTTTS----T-
T ss_pred HHHHHHHHHHHHhhhEEEEEE-EEeCC-----------------HHHHHHHHHH--HHcCCeEEEEEechhhhh----h-
Confidence 456778999999999999997 55554 2577788877 468999999997532110 0
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHcCCceeecccccccccccCCccc---ccccCCCCCCCCCCCCchhhhhcccCcccc
Q 001126 921 QRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREV---IDQTDTSLSGNPTAPNTPEALSRKSGRFMI 997 (1149)
Q Consensus 921 ~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~~Yl~f~~Lr~r~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~i 997 (1149)
...+..|...|+.+.+.... ...+.. +++. ... .+...
T Consensus 113 ---------------~~~~~~~~~~~~~~~~~~~~------~~~h~K~~viD~~--------------~~~----~~~~~ 153 (220)
T 4gel_A 113 ---------------GSQISMLAQLGVPVRVPITT------NLMHNKFCIIDGF--------------ERV----EEIRL 153 (220)
T ss_dssp ---------------TCHHHHHHHTTCCEEECCSS------SCBCCCEEEESCH--------------HHH----HHHHH
T ss_pred ---------------HHHHHHHHhcCCcEEeeccc------ccccceeEEEcch--------------hcc----ccccc
Confidence 01345566677765431000 000000 0000 000 00123
Q ss_pred eeeeEEEEEeCeEEEEcccccccCCCCCCCCcceEEEEeCcchh
Q 001126 998 YVHSKGMIVDDEYVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 998 YVHSKlmIVDD~~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
..|.|++|+|++++++||+||+.||+. .|.|..+++.++..+
T Consensus 154 ~~H~K~~v~D~~~v~~GS~N~t~~s~~--~N~E~~~vi~~~~~a 195 (220)
T 4gel_A 154 LRKLKFMRPCYSIVISGSVNWTALGLG--GNWENCIITADDKLT 195 (220)
T ss_dssp HTTCSCCCCCCCEEEEESCCBSHHHHH--TSBEEEEEECCHHHH
T ss_pred ccceeccccccceEEecCccccccccc--cCceEEEEEECHHHH
Confidence 568888888899999999999999998 799999999988654
No 60
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.08 E-value=1.7e-10 Score=143.33 Aligned_cols=107 Identities=24% Similarity=0.407 Sum_probs=90.9
Q ss_pred eeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeecCCCCCeeceEEEEEcc
Q 001126 344 LLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVA----GAVVGRTFVISNSEDPVWQQHFYVPVA 419 (1149)
Q Consensus 344 LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~----g~~~~rTkVi~nt~nPvWNE~F~f~v~ 419 (1149)
+..+.|.|+|++|++|..+|..|. +||||+|.+. .....||+++++++||+|||+|.|.+.
T Consensus 169 ~~~~~L~V~v~~a~~L~~~d~~g~---------------sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~ 233 (674)
T 3pfq_A 169 IDREVLIVVVRDAKNLVPMDPNGL---------------SDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLK 233 (674)
T ss_dssp ECSSEEEEEEEEEESCCCCSTTSS---------------CCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECC
T ss_pred eccceeeeeeecccccCCCCcccc---------------cCcccccccccCccccccccccccccccCCCccceeeeecc
Confidence 456789999999999999998886 8999999992 223359999999999999999999986
Q ss_pred CC--CceEEEEEEEccCC-CCcceeeEEEeceeeccCCceeeeEeeccCC
Q 001126 420 HS--AAEVHFFVKDSDVV-GSELIGTVAIPVEQIYSGGKVEGTYPVLNGS 466 (1149)
Q Consensus 420 ~~--~~~L~~~V~D~D~~-~ddfIG~v~Ipl~~L~~G~~~~~W~pL~~~~ 466 (1149)
.. ...|.|+|||+|.. .|++||++.+++.++..+. .+.|++|++..
T Consensus 234 ~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~~ 282 (674)
T 3pfq_A 234 ESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQE 282 (674)
T ss_dssp STTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCTT
T ss_pred cCCccceeeeEEeecccccccccccccccchhhhccCC-cccceeecccc
Confidence 44 36799999999984 5889999999999998654 58999998643
No 61
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.04 E-value=2.3e-09 Score=104.00 Aligned_cols=110 Identities=18% Similarity=0.231 Sum_probs=85.5
Q ss_pred eEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEEe---ee-eeecCCCCCeeceEEEEEccCCC
Q 001126 347 GNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVVG---RT-FVISNSEDPVWQQHFYVPVAHSA 422 (1149)
Q Consensus 347 GtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~~---rT-kVi~nt~nPvWNE~F~f~v~~~~ 422 (1149)
+.|+|.+.++.--+-+.. + ...||||.|.++..... +| ..+++|..|+|||+|.-.+. ..
T Consensus 6 ~flRi~~~~~~~~~~~~~-~--------------~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~G 69 (126)
T 1yrk_A 6 PFLRIAFNSYELGSLQAE-D--------------EANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EG 69 (126)
T ss_dssp CEEEEEEEEEECSSCCCS-S--------------SSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TT
T ss_pred ccEEeeeccccccccCCc-c--------------ccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CC
Confidence 348999877764221111 1 12799999999987765 87 77777999999999999976 45
Q ss_pred ceEEEEEEEccCCCCcceeeEEEeceeec-----cCCceeeeEeeccCCCCCCCCCceeEEEEEee
Q 001126 423 AEVHFFVKDSDVVGSELIGTVAIPVEQIY-----SGGKVEGTYPVLNGSGKPCKPGATLTLSIQYT 483 (1149)
Q Consensus 423 ~~L~~~V~D~D~~~ddfIG~v~Ipl~~L~-----~G~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~ 483 (1149)
..|.|.|++... +|++.|+|++++|. .+...+.|++|. +.|+|++.++|+
T Consensus 70 r~l~i~Vfh~a~---~fvAn~tV~~edL~~~c~~~~g~~e~WvdLe--------P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 70 RVIQIVLMRAAE---EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQ--------PQAKVLMSVQYF 124 (126)
T ss_dssp CEEEEEEEEETT---EEEEEEEEEHHHHHHHHHTTTTEEEEEEECB--------SSCEEEEEEEEE
T ss_pred EEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEe
Confidence 689999997655 99999999999998 345678999993 345899999875
No 62
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.99 E-value=3.3e-09 Score=104.18 Aligned_cols=109 Identities=18% Similarity=0.290 Sum_probs=87.0
Q ss_pred EEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEECCEEE---eee-eeecCCCCCeeceEEEEEccCCCce
Q 001126 349 LDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAVAGAVV---GRT-FVISNSEDPVWQQHFYVPVAHSAAE 424 (1149)
Q Consensus 349 L~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l~g~~~---~rT-kVi~nt~nPvWNE~F~f~v~~~~~~ 424 (1149)
|+|.+.+..--+-+...+. ..||||.|.++.... ++| ..+++|..|+|||+|.-.|. ....
T Consensus 12 lRi~l~~~~~~~~~~~~~~--------------~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~ 76 (138)
T 2enj_A 12 LRIGLSNFDCGSCQSCQGE--------------AVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRV 76 (138)
T ss_dssp EEEEEEEEECCCCCCSCCC--------------CCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCE
T ss_pred eEEEeeccccCCCCCcccc--------------cCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeE
Confidence 8999988775443221111 279999999998877 899 77888999999999998876 4568
Q ss_pred EEEEEEEccCCCCcceeeEEEeceeec-----cCCceeeeEeeccCCCCCCCCCceeEEEEEee
Q 001126 425 VHFFVKDSDVVGSELIGTVAIPVEQIY-----SGGKVEGTYPVLNGSGKPCKPGATLTLSIQYT 483 (1149)
Q Consensus 425 L~~~V~D~D~~~ddfIG~v~Ipl~~L~-----~G~~~~~W~pL~~~~Gk~~~~~g~L~L~L~f~ 483 (1149)
|.|.|++... +|+..|+|++++|. .+...+.|++|. +.|+|++.++|.
T Consensus 77 l~i~Vfh~a~---~fVAn~tV~~edL~~~ck~~~g~~e~WvdLe--------P~Gkl~v~i~~~ 129 (138)
T 2enj_A 77 MQIIVKGKNV---DLISETTVELYSLAERCRKNNGKTEIWLELK--------PQGRMLMNARYF 129 (138)
T ss_dssp EEEEEECSSC---SCCEEEEEESHHHHHHHHHTTTCEEEEEECB--------SSCEEEEEEEEC
T ss_pred EEEEEEcCCC---CeeeEEEEEHHHHHhhhccCCCceEEEEecc--------cCcEEEEEEEEE
Confidence 9999996554 99999999999998 345678999993 345899999985
No 63
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=98.77 E-value=2e-08 Score=119.11 Aligned_cols=122 Identities=22% Similarity=0.307 Sum_probs=84.5
Q ss_pred HHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCC-CCch
Q 001126 841 SIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVP-TGAA 919 (1149)
Q Consensus 841 sI~~ayl~aI~~Ak~fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rgv~V~IVlP~~Peg~p-~~~s 919 (1149)
.+..+++++|++||++|+|++.||.++. +..+++.+|.+|.++++||+|+|+++.....-. .+..
T Consensus 37 ~~~~~l~~~I~~A~~~I~i~~~~~~~d~--------------~g~~l~~aL~~aa~r~~GV~Vril~D~~~~~r~~~g~~ 102 (458)
T 3hsi_A 37 EFKTQIIELIRNAKKRIYVTALYWQKDE--------------AGQEILDEIYRVKQENPHLDVKVLIDWHRAQRNLLGAE 102 (458)
T ss_dssp HHHHHHHHHHHTCSSEEEEEESCBCSSH--------------HHHHHHHHHHHHHHHSTTCEEEEEEETTGGGSCCC---
T ss_pred HHHHHHHHHHHhcCCEEEEEEEEEecCc--------------HHHHHHHHHHHHHhcCCCCEEEEEEECccccccccccc
Confidence 5788999999999999999999998753 245788888888776779999999997421000 0000
Q ss_pred hHHHHHHHHhhhhhHHHHHHHHHHHcC--Ccee--ecccccccccc--cCCcccccccCCCCCCCCCCCCchhhhhcccC
Q 001126 920 TQRILFWQHKTMQMMYETIYKALVEVG--LEGA--FSPQDYLNFFC--LGNREVIDQTDTSLSGNPTAPNTPEALSRKSG 993 (1149)
Q Consensus 920 ~~~il~~~~rTm~~~~~si~~~L~~~G--v~~~--~~P~~Yl~f~~--Lr~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r 993 (1149)
.. ....+++..|+++| +++. . |. ++.++
T Consensus 103 --~~---------~~~~~~~~~L~~~g~nv~v~~~~--------f~~p~~~~~--------------------------- 136 (458)
T 3hsi_A 103 --KS---------ATNADWYCEQRQTYQLPDDPNMF--------FGVPINTRE--------------------------- 136 (458)
T ss_dssp -------------CCHHHHHHHHHHHHTCTTCCCCE--------EEECSSSSG---------------------------
T ss_pred --cc---------cccHHHHHHHHhhCCCceEeeee--------cCCcccccc---------------------------
Confidence 00 00135678888877 6554 2 11 11000
Q ss_pred cccceeeeEEEEEeCeEEEEcccccccCCCC
Q 001126 994 RFMIYVHSKGMIVDDEYVILGSANINQRSME 1024 (1149)
Q Consensus 994 ~~~iYVHSKlmIVDD~~viIGSANiN~RSm~ 1024 (1149)
.....|.|++||||++++.| +||+++.+.
T Consensus 137 -~~~r~H~Ki~viD~~v~~~G-~Ni~d~y~~ 165 (458)
T 3hsi_A 137 -VFGVLHVKGFVFDDTVLYSG-ASINNVYLH 165 (458)
T ss_dssp -GGCCEECCEEEETTEEEEES-CCBSTTTTT
T ss_pred -ccCcceeeEEEECCCEEEEe-eecCHHHhc
Confidence 12368999999999998777 999999986
No 64
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=98.51 E-value=1.9e-07 Score=112.08 Aligned_cols=137 Identities=12% Similarity=0.110 Sum_probs=86.3
Q ss_pred hHHHHHHHHHHHhhccEEEEEEeee-ecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCC--cEEEEEecCCCCCCCC
Q 001126 840 MSIHTAYVKAIRSAQHFIYIENQYF-IGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHER--FAAYIVIPMWPEGVPT 916 (1149)
Q Consensus 840 ~sI~~ayl~aI~~Ak~fIYIENQYF-i~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rg--v~V~IVlP~~Peg~p~ 916 (1149)
..+..+++++|++||++|+|+..+| ..+. +...++.+|.+|. +|| |+|+||+...+.+...
T Consensus 65 ~~~~~~l~~~I~~Ak~~I~i~~y~~~~~d~--------------~g~~i~~aL~~aa--~rGp~V~Vril~D~~g~~~~~ 128 (506)
T 1v0w_A 65 KRLLAKMTENIGNATRTVDISTLAPFPNGA--------------FQDAIVAGLKESA--AKGNKLKVRILVGAAPVYHMN 128 (506)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEEESSCCCHH--------------HHHHHHHHHHHHH--HTTCCEEEEEEEECCC--CCC
T ss_pred HHHHHHHHHHHHHhccEEEEEEeeccCCCh--------------HHHHHHHHHHHHH--hCCCCcEEEEEEeCccccccc
Confidence 4689999999999999999997653 3221 1345777777764 567 9999999874321100
Q ss_pred CchhHHHHHHHHhhhhhHHHHHHHHHHHcCCceeeccccccccc--ccCCcccccccCCCCCCCCCCCCchhhhhcccCc
Q 001126 917 GAATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFF--CLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGR 994 (1149)
Q Consensus 917 ~~s~~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~~Yl~f~--~Lr~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 994 (1149)
. ....+.+.|+++|+++.. ++.+. .+... ..+
T Consensus 129 --~--------------~~~~~~~~L~~~g~~~~~----~~~~~~~~~~~~--------------------------~~~ 162 (506)
T 1v0w_A 129 --V--------------IPSKYRDELTAKLGKAAE----NITLNVASMTTS--------------------------KTA 162 (506)
T ss_dssp --C--------------HHHHHHHHHHHHHGGGGG----GEEEEEEEECSB--------------------------TTT
T ss_pred --c--------------CCHHHHHHHHhcccceee----cCcccccccccc--------------------------CCc
Confidence 0 112456778877765421 11111 00000 000
Q ss_pred ccceeeeEEEEEeCeEEEEccccc-ccCCCCC-CCCcceEEEEeCcc
Q 001126 995 FMIYVHSKGMIVDDEYVILGSANI-NQRSMEG-TRDTEIAMGAYQPE 1039 (1149)
Q Consensus 995 ~~iYVHSKlmIVDD~~viIGSANi-N~RSm~G-~~DsEiav~i~dp~ 1039 (1149)
....|.|++|||++++++||+|| +++.+.. ..-.++.+.+..+.
T Consensus 163 -~~r~H~K~~ViD~~~a~~Gg~Nl~~d~y~~~~~~~~D~~v~i~G~~ 208 (506)
T 1v0w_A 163 -FSWNHSKILVVDGQSALTGGINSWKDDYLDTTHPVSDVDLALTGPA 208 (506)
T ss_dssp -TBCBCCCEEEETTTEEEEESCCCCHHHHTSSSSCCBEEEEEEESHH
T ss_pred -cccceeeEEEECCcEEEeeccccCccccccCCCCceEEEEEEECHH
Confidence 12579999999999999999998 6665531 02378888888764
No 65
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=98.16 E-value=6e-06 Score=101.52 Aligned_cols=120 Identities=13% Similarity=0.139 Sum_probs=88.3
Q ss_pred HHHHHHHHHhhcc-----EEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecCCCCCCCCC
Q 001126 843 HTAYVKAIRSAQH-----FIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPMWPEGVPTG 917 (1149)
Q Consensus 843 ~~ayl~aI~~Ak~-----fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rgv~V~IVlP~~Peg~p~~ 917 (1149)
.++++++|++|++ .|.|+ .|.++.. ..|+.+|++| |++|++|+||+....-.. ..
T Consensus 354 f~~vi~~I~~A~~DP~V~sIk~t-lYr~~~d----------------s~Iv~ALi~A--A~rGv~V~vLvel~arfd-ee 413 (705)
T 2o8r_A 354 YDYVVRLLMEAAISPDVSEIRLT-QYRVAEN----------------SSIISALEAA--AQSGKKVSVFVELKARFD-EE 413 (705)
T ss_dssp SHHHHHHHHHHHTCTTEEEEEEE-ESCCCSC----------------CHHHHHHHHH--HHTTCEEEEEECCCSCC----
T ss_pred HHHHHHHHHHhccCCCceEEEEE-EEEEcCC----------------HHHHHHHHHH--HHCCCEEEEEEeCCCCcc-hh
Confidence 3679999999999 99964 5666532 2577888887 468999999998532110 00
Q ss_pred chhHHHHHHHHhhhhhHHHHHHHHHHHcCCceeecccccccccccCCcccccccCCCCCCCCCCCCchhhhhcccCcccc
Q 001126 918 AATQRILFWQHKTMQMMYETIYKALVEVGLEGAFSPQDYLNFFCLGNREVIDQTDTSLSGNPTAPNTPEALSRKSGRFMI 997 (1149)
Q Consensus 918 ~s~~~il~~~~rTm~~~~~si~~~L~~~Gv~~~~~P~~Yl~f~~Lr~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~i 997 (1149)
++ ....++|+++|+++.+. +. ..
T Consensus 414 ~n----------------i~wa~~Le~aGv~Vv~g---------~~--------------------------------~l 436 (705)
T 2o8r_A 414 NN----------------LRLSERMRRSGIRIVYS---------MP--------------------------------GL 436 (705)
T ss_dssp -C----------------HHHHHHHHHHTCEEEEC---------CT--------------------------------TC
T ss_pred hh----------------HHHHHHHHHCCCEEEEc---------cC--------------------------------CC
Confidence 11 13568899999998541 00 12
Q ss_pred eeeeEEEEEeCe---------EEEEcccccccCCCCCCCCcceEEEEeCcchh
Q 001126 998 YVHSKGMIVDDE---------YVILGSANINQRSMEGTRDTEIAMGAYQPEYT 1041 (1149)
Q Consensus 998 YVHSKlmIVDD~---------~viIGSANiN~RSm~G~~DsEiav~i~dp~~~ 1041 (1149)
.+|+|++|||++ |+-+|+.|+|+.+.. .-+++++.+.++..+
T Consensus 437 k~H~Ki~lIdrr~~~~g~~~~y~~igtGN~n~~tar--iy~D~~l~t~~~~i~ 487 (705)
T 2o8r_A 437 KVHAKTALILYHTPAGERPQGIALLSTGNFNETTAR--IYSDTTLMTANTDIV 487 (705)
T ss_dssp CBCCCEEEEEECCCSSSCCCEEEEEESSCSSCCCSS--CEEEEEEEECCHHHH
T ss_pred CceeEEEEEecccccCCceeEEEeccccceeeeEEE--EEeeeeeeecChHHH
Confidence 479999999987 788999999999997 789999999888753
No 66
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=95.30 E-value=0.0022 Score=73.23 Aligned_cols=35 Identities=11% Similarity=-0.066 Sum_probs=29.8
Q ss_pred EEEEeCeEEEEccccc----ccCCCCCCCCcceEEEEeCcch
Q 001126 1003 GMIVDDEYVILGSANI----NQRSMEGTRDTEIAMGAYQPEY 1040 (1149)
Q Consensus 1003 lmIVDD~~viIGSANi----N~RSm~G~~DsEiav~i~dp~~ 1040 (1149)
++|+|++++++|++|. +.||+. .+.| ++++.|+.+
T Consensus 192 l~ivD~~~alv~~~~~~~~~~~rS~~--~~~e-aliv~~~~l 230 (342)
T 3qph_A 192 IGMTDGKEVVTIQNATFDSIGPPSFK--STYP-EIIFSQYSL 230 (342)
T ss_dssp EEEETTTEEEEECSSSCCSSCCCEEE--ECCH-HHHHHHHHH
T ss_pred EEEEECCEEEEecccccccccccccc--cccc-EEEEECHHH
Confidence 5999999999999998 349998 7888 888877764
No 67
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=93.59 E-value=0.097 Score=56.49 Aligned_cols=50 Identities=18% Similarity=0.062 Sum_probs=43.0
Q ss_pred hHHHHHHHHHHHhccceEEEEeeccceeeEEeCCCCchHHHHHHHHHHHHhcCCeEEEEEecC
Q 001126 545 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLVWDD 607 (1149)
Q Consensus 545 ~~f~al~eAI~~Ak~sI~I~~W~~~p~i~L~r~~~~~~g~rL~dlL~~kA~rGVkVrILVwD~ 607 (1149)
...+.+.+.|++|+++|+|..|. ..-.+|.+.|++|++|||.|+|+++..
T Consensus 10 ~Ii~r~~e~I~~A~~el~lsi~~-------------e~l~~l~~~L~~A~~rGV~V~liv~~~ 59 (233)
T 2f5t_X 10 EAIEMFRESLYSAKNEVIVVTPS-------------EFFETIREDLIKTLERGVTVSLYIDKI 59 (233)
T ss_dssp HHHHHHHHHHHTCSSEEEEEECG-------------GGHHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred HHHHHHHHHHHHhhhEEEEEeCH-------------HHHHHHHHHHHHHHHCCCEEEEEEcCC
Confidence 45789999999999999998771 245789999999999999999999653
No 68
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=93.29 E-value=0.24 Score=56.43 Aligned_cols=47 Identities=19% Similarity=0.113 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHhccceEEEEeeccceeeEEeCCCCchHHHHHHHHHHHHhcCCeEEEEE
Q 001126 545 KCWYDICNAISQAQRLIYITGWSVWHKVKLVRDASPALDCTLGELLRSKSQEGVRVLLLV 604 (1149)
Q Consensus 545 ~~f~al~eAI~~Ak~sI~I~~W~~~p~i~L~r~~~~~~g~rL~dlL~~kA~rGVkVrILV 604 (1149)
.....+.+.|.+|+++|++..|.- .-..+.+.|+++++|||+|++++
T Consensus 119 ~I~~ri~eli~~A~~eI~i~~~~~-------------~l~~l~~~L~~a~~RGV~Vrvi~ 165 (342)
T 3qph_A 119 EAIEMFRESLYSAKNEVIVVTPSE-------------FFETIREDLIKTLERGVTVSLYI 165 (342)
T ss_dssp HHHHHHHHHHHHCSSEEEEEECHH-------------HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhhheEEEEEeCHH-------------HHHHHHHHHHHHHhCCCEEEEEE
Confidence 458899999999999999998721 23677789999999999999997
No 69
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=82.29 E-value=3.3 Score=53.04 Aligned_cols=71 Identities=13% Similarity=0.247 Sum_probs=49.5
Q ss_pred eceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeecCCCCCeeceEEEEEcc
Q 001126 345 LHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAVVG---RTFVISNSEDPVWQQHFYVPVA 419 (1149)
Q Consensus 345 lhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~g~~~~---rTkVi~nt~nPvWNE~F~f~v~ 419 (1149)
+...|.|+|..+.++...+ . .+-||++.| +++... .|+.+.-..+|.|||.+.|++.
T Consensus 215 ~~~~f~i~i~~~~~~~~~~---~---------------~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~ 276 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNADE---R---------------MKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDIS 276 (940)
T ss_dssp CCSEEEEEEEEEECCCC---------------------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEE
T ss_pred cCCceEEEEEEecccCCCC---C---------------ceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccc
Confidence 3456999999999986321 1 578888877 554432 4555555788999998777753
Q ss_pred --CC--CceEEEEEEEcc
Q 001126 420 --HS--AAEVHFFVKDSD 433 (1149)
Q Consensus 420 --~~--~~~L~~~V~D~D 433 (1149)
+. .+.|.|+||+..
T Consensus 277 i~dLPr~a~L~~ti~~~~ 294 (940)
T 2wxf_A 277 VCDLPRMARLCFALYAVV 294 (940)
T ss_dssp GGGCCTTCEEEEEEEEEC
T ss_pred cccCCcccEEEEEEEEec
Confidence 32 588999999853
No 70
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=79.79 E-value=3.6 Score=44.28 Aligned_cols=40 Identities=18% Similarity=0.163 Sum_probs=34.8
Q ss_pred eeeeEEEEE---eCeEEEEcccccccCCCCCCCCcceEEEEeCcc
Q 001126 998 YVHSKGMIV---DDEYVILGSANINQRSMEGTRDTEIAMGAYQPE 1039 (1149)
Q Consensus 998 YVHSKlmIV---DD~~viIGSANiN~RSm~G~~DsEiav~i~dp~ 1039 (1149)
.+|+|+-.. |...+||||.|+..--|. .|-|++|.+++..
T Consensus 103 i~HaK~Yg~~~n~g~~LIV~SgNfT~pGms--QNvE~sllld~~T 145 (358)
T 2c1l_A 103 ILHAKLYGTSNNLGESLVVSSGNFTGPGMS--QNIEASLLLDNNT 145 (358)
T ss_dssp CBCCEEEEEEETTEEEEEEESCCBSTTTTT--TSBEEEEEECHHH
T ss_pred ecchhhhcccCCCceEEEEecCCccccccc--cceeEEEEEcCCC
Confidence 579998776 568899999999999998 8999999997764
No 71
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=78.55 E-value=6.9 Score=39.52 Aligned_cols=98 Identities=14% Similarity=0.115 Sum_probs=69.6
Q ss_pred cEEEEEECCEEEeeeeeecCCCCCeeceEEEEEccCC--------CceEEEEEEEccCCCCcceeeEEEeceeeccC-Cc
Q 001126 385 PYVTIAVAGAVVGRTFVISNSEDPVWQQHFYVPVAHS--------AAEVHFFVKDSDVVGSELIGTVAIPVEQIYSG-GK 455 (1149)
Q Consensus 385 PYV~V~l~g~~~~rTkVi~nt~nPvWNE~F~f~v~~~--------~~~L~~~V~D~D~~~ddfIG~v~Ipl~~L~~G-~~ 455 (1149)
.||++.+-.-....|-++. +.+|.+|-+-.+.|... ...|.|++....-..-+.||++.|++.+|... ..
T Consensus 44 tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g~~~~tla~~~I~l~~lLe~~~~ 122 (156)
T 2yrb_A 44 TFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILEKSGR 122 (156)
T ss_dssp EEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECSSCEEEEEEEEECCSHHHHCCSC
T ss_pred EEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeCCCceEEEEEEEEhHHhhCcCCc
Confidence 3566665554444666665 89999999888877544 24688888776444456999999999999843 44
Q ss_pred eeeeEeeccCCCCCCCCCceeEEEEEeec
Q 001126 456 VEGTYPVLNGSGKPCKPGATLTLSIQYTP 484 (1149)
Q Consensus 456 ~~~W~pL~~~~Gk~~~~~g~L~L~L~f~p 484 (1149)
+.+..+|.+.+|+. ..-|.|.+.|++..
T Consensus 123 i~g~~~L~g~~g~~-~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 123 IFCTASLIGTKGDI-PNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEEEECBSSSCC-TTSEEEEEEEEEEE
T ss_pred eEEEEEEEcCCCCc-ceEEEEEEEEEEec
Confidence 66778998887742 13469999998763
No 72
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=71.22 E-value=11 Score=48.94 Aligned_cols=90 Identities=14% Similarity=0.185 Sum_probs=57.4
Q ss_pred eeeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeecCCCCCeeceEEEE
Q 001126 342 VLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAVVG---RTFVISNSEDPVWQQHFYV 416 (1149)
Q Consensus 342 ~~LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~g~~~~---rTkVi~nt~nPvWNE~F~f 416 (1149)
+|-+...+.|+|..+.++.. +.... .+-||++.| +++... +|+.+. ..+|.|||-..|
T Consensus 350 lw~~~~~f~v~i~~~~~~n~-~~~~~---------------~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f 412 (1091)
T 3hhm_A 350 LWVINSALRIKILCATYVNV-NIRDI---------------DKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNY 412 (1091)
T ss_dssp GGGCCSEEEEEEEEESCCCC-CCSSC---------------CCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEE
T ss_pred hhhCCCCEEEEEEEecCCCC-Ccccc---------------ceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEe
Confidence 46667789999999998863 22111 577998888 333221 444333 567889997777
Q ss_pred Ec--cCC--CceEEEEEEEccCC-----CCcceeeEEEece
Q 001126 417 PV--AHS--AAEVHFFVKDSDVV-----GSELIGTVAIPVE 448 (1149)
Q Consensus 417 ~v--~~~--~~~L~~~V~D~D~~-----~ddfIG~v~Ipl~ 448 (1149)
++ .+. .+.|.|+|++.... ....||-+.++|-
T Consensus 413 ~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lf 453 (1091)
T 3hhm_A 413 DIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLF 453 (1091)
T ss_dssp EEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESB
T ss_pred cCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeE
Confidence 64 333 58999999986542 1235666666653
No 73
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=69.00 E-value=8.3 Score=41.05 Aligned_cols=38 Identities=11% Similarity=0.308 Sum_probs=31.4
Q ss_pred eeeeeecCCCCCeeceEEEEEccCC---CceEEEEEEEccC
Q 001126 397 GRTFVISNSEDPVWQQHFYVPVAHS---AAEVHFFVKDSDV 434 (1149)
Q Consensus 397 ~rTkVi~nt~nPvWNE~F~f~v~~~---~~~L~~~V~D~D~ 434 (1149)
.+|.|...+.+|.|+|++.+.+... ...|.|+++....
T Consensus 79 ~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 79 YKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp EECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred EEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 4889999999999999999987644 3789999987554
No 74
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=64.61 E-value=25 Score=45.15 Aligned_cols=76 Identities=11% Similarity=0.056 Sum_probs=48.5
Q ss_pred eeeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEEEe--eeeeecCCCCCeeceEEEEE
Q 001126 342 VLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAVVG--RTFVISNSEDPVWQQHFYVP 417 (1149)
Q Consensus 342 ~~LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~g~~~~--rTkVi~nt~nPvWNE~F~f~ 417 (1149)
+|-+...++|+|..+......+ .. .++-||++.| +++... +|+-+.-+.+|.|||-+.|+
T Consensus 213 lw~~~~~f~i~i~~~~~~~~~~-~~---------------~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~ 276 (961)
T 1e7u_A 213 LWDCDRKFRVKIRGIDIPVLPR-TA---------------DLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFS 276 (961)
T ss_dssp CSCCCSEEEEEEEEEECSSCCT-TS---------------CEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEE
T ss_pred eeeccCceEEEEeecccccccC-CC---------------CceEEEEEEEEECCEEcccceeeccccCCCcccceeEEec
Confidence 4555667899999886421110 11 1578888766 555443 44444446789999987776
Q ss_pred cc--CC--CceEEEEEEEcc
Q 001126 418 VA--HS--AAEVHFFVKDSD 433 (1149)
Q Consensus 418 v~--~~--~~~L~~~V~D~D 433 (1149)
+. +. .+.|.|+|++..
T Consensus 277 i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 277 IKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp EEGGGCCTTCEEEEEEEEEE
T ss_pred cccccCCcccEEEEEEEecc
Confidence 43 32 588999999754
No 75
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=60.59 E-value=6.6 Score=50.95 Aligned_cols=75 Identities=13% Similarity=0.178 Sum_probs=51.5
Q ss_pred ceeeeceEEEEEEEEeeCCCCCCCCCccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeecCCCCCeeceEEE
Q 001126 341 KVLLLHGNLDIWIYSAKNLPNMDMFHKTLGGMFNSQMNTKITSDPYVTIAV--AGAVVG---RTFVISNSEDPVWQQHFY 415 (1149)
Q Consensus 341 ~~~LlhGtL~VtVieAk~L~~~D~~g~~~~~~~~k~~~~~~~sDPYV~V~l--~g~~~~---rTkVi~nt~nPvWNE~F~ 415 (1149)
.+|-+...+.|+|..+.++...+ . .+-||++.| +++... +|+.+.-..+|.|||-+.
T Consensus 347 s~~~~~~~f~i~i~~~~~~~~~~---~---------------~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~ 408 (1092)
T 2y3a_A 347 HIWDNNNPFQITLVKGNKLNTEE---T---------------VKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLE 408 (1092)
T ss_dssp -CCCCCSEEEEEECCCCCCCCCS---S---------------CCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEE
T ss_pred ehhhcCCCEEEEEEEeccCCCCC---C---------------ceEEEEEEEEECCEEccCceecccccCCCCCccceeEE
Confidence 45677788999999999886321 1 567777555 555442 455555477899999877
Q ss_pred EEcc--CC--CceEEEEEEEcc
Q 001126 416 VPVA--HS--AAEVHFFVKDSD 433 (1149)
Q Consensus 416 f~v~--~~--~~~L~~~V~D~D 433 (1149)
|++. +. .+.|.|+||+..
T Consensus 409 f~i~~~dLPr~a~L~~ti~~~~ 430 (1092)
T 2y3a_A 409 FDINICDLPRMARLCFAVYAVL 430 (1092)
T ss_dssp EEEESSSCCTTCEEEEECCCC-
T ss_pred eCCccccCChhcEEEEEEEEec
Confidence 7653 32 488999998853
No 76
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=45.44 E-value=28 Score=37.27 Aligned_cols=50 Identities=10% Similarity=0.055 Sum_probs=36.6
Q ss_pred hHHHHHHHHHHHhhccEEEEEEeeeecCCCCcccccccCcCCccHHHHHHHHHHHHHcCCCcEEEEEecC
Q 001126 840 MSIHTAYVKAIRSAQHFIYIENQYFIGSSYNWSSYRDLGANNLIPMEIALKIADKIRAHERFAAYIVIPM 909 (1149)
Q Consensus 840 ~sI~~ayl~aI~~Ak~fIYIENQYFi~~~~~w~~~~~~g~~n~I~~~ial~Ia~aira~rgv~V~IVlP~ 909 (1149)
..|.+-..++|++|++.|+|+ ++.. . -.++...|.+| .++||.|+|++..
T Consensus 9 e~Ii~r~~e~I~~A~~el~ls----i~~e-------------~-l~~l~~~L~~A--~~rGV~V~liv~~ 58 (233)
T 2f5t_X 9 DEAIEMFRESLYSAKNEVIVV----TPSE-------------F-FETIREDLIKT--LERGVTVSLYIDK 58 (233)
T ss_dssp HHHHHHHHHHHHTCSSEEEEE----ECGG-------------G-HHHHHHHHHHH--HHTTCEEEEEESS
T ss_pred HHHHHHHHHHHHHhhhEEEEE----eCHH-------------H-HHHHHHHHHHH--HHCCCEEEEEEcC
Confidence 468888999999999999993 3322 1 13455566655 3689999999975
No 77
>1q32_A TDP1P;, tyrosyl-DNA phosphodiesterase; DNA repair, replication, transcription, hydrolase, replication,transcription, hydrolase; 2.03A {Saccharomyces cerevisiae} SCOP: d.136.1.3 d.136.1.3
Probab=32.84 E-value=22 Score=42.80 Aligned_cols=42 Identities=29% Similarity=0.233 Sum_probs=29.9
Q ss_pred cccceeeeEEEEE---------e---C----eEEEEcccccccCCCC----CCCCcceEEEE
Q 001126 994 RFMIYVHSKGMIV---------D---D----EYVILGSANINQRSME----GTRDTEIAMGA 1035 (1149)
Q Consensus 994 ~~~iYVHSKlmIV---------D---D----~~viIGSANiN~RSm~----G~~DsEiav~i 1035 (1149)
|....-|.|++|- | | .|++||||||..-.+. --++.||+|++
T Consensus 426 R~~a~PHiKty~r~~~~~~~~~~~~~~~~~i~W~lltSaNLSkaAWG~~~k~irnyElGVL~ 487 (544)
T 1q32_A 426 RGTTPAHSKFYMHCATNSAGPCDASQVFKELEWCLYTSANLSQTAWGTVSRKPRNYEAGVLY 487 (544)
T ss_dssp TTTCCBCCEEEEEEEECC-------CTTSEESEEEEESCCBSHHHHCCSSSCCSSBEEEEEE
T ss_pred CCCccCceEEEEeeccccccccccCCCccceeEEEEccccCCHHHhhhhhccccceEeEEEe
Confidence 4457889999873 2 1 4899999999643321 01799999999
Done!