Your job contains 1 sequence.
>001133
MSDINSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQACPAYLLNLRCPHS
LYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLEDAELPLESSRFQ
SHQSSTHLHSSPLKNLAKQRDHMFHKECERITFQEFQKDPVELAEENTEMEFFSQPKHSS
SLLDGSFAECLPIVPPKIDHRVWTIESSWFQDHQPSRHLFSPPLENLKKEGDHLFRKECE
RITFGDAEKDPAELQEENTEMEYVPQPKYSFGLSDGSFAKCLPIVPWKIDRHAWTIESSR
FQYHQSSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHTPELKEENSKRELVSQPKY
SSKLLDCPFAECLSPVLRKIDLHGWTSGNRFSLKGSYFLETCFLADGRSSIPVEGDLLNS
QRGYEYLQIEPGVSNGASGTASPLDKDEFSNEFEVSKDIKKPLRLSCFSQGSPPLGGPLF
SGGEERCESSTGCFKYKRKRKRVCYDKRMDILEADFSNQSFDSFSRTPLQDEASCSQHLP
RLSTAGDITAGFDLMSRASLNLFPSHAEPFTKETNFLSDSIEPVGNSVSDYKALNSVWCS
KISDPFPQGASWNDGHFIYNNALEGHSILGEGTSCGQLADTEENYKFDYDSKLRRSNQEK
CTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREHSDVPFDKTDWLCSVLSSIEYDNP
ETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRRYISLNCCSVEAGKSNAHTLHCAK
NSPEAGAFKHLQQSSGVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAENFKLSLCP
HAHLGAQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPDS
INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL
DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP
CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV
EELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSSELWHGLHRGEISLKRASRRLL
TGVRG
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 001133
(1145 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
DICTYBASE|DDB_G0283883 - symbol:mlh3 "MutL DNA mismatch r... 295 2.2e-26 3
RGD|1309227 - symbol:Mlh3 "mutL homolog 3 (E. coli)" spec... 198 1.9e-23 4
UNIPROTKB|E2QZJ2 - symbol:MLH3 "Uncharacterized protein" ... 206 4.3e-23 4
UNIPROTKB|E1BNK2 - symbol:MLH3 "Uncharacterized protein" ... 207 5.9e-23 4
UNIPROTKB|F1S2R6 - symbol:MLH3 "Uncharacterized protein" ... 206 1.8e-22 4
UNIPROTKB|E2QZI8 - symbol:MLH3 "Uncharacterized protein" ... 206 6.8e-19 2
UNIPROTKB|E1C7F3 - symbol:LOC100859200 "Uncharacterized p... 217 5.3e-18 3
SGD|S000006085 - symbol:MLH3 "Protein involved in mismatc... 163 8.8e-17 3
ZFIN|ZDB-GENE-060810-45 - symbol:mlh3 "mutL homolog 3 (E.... 153 2.5e-16 3
UNIPROTKB|Q9UHC1 - symbol:MLH3 "DNA mismatch repair prote... 196 3.7e-16 2
UNIPROTKB|Q9Y6S7 - symbol:unknown "Putative uncharacteriz... 221 6.3e-15 1
UNIPROTKB|Q5B515 - symbol:AN4365.2 "DNA mismatch repair p... 238 1.4e-14 2
POMBASE|SPAC19G12.02c - symbol:pms1 "MutL family mismatch... 208 1.8e-13 2
CGD|CAL0003904 - symbol:orf19.7257 species:5476 "Candida ... 221 2.5e-13 2
UNIPROTKB|Q75F21 - symbol:AAL093C "AAL093Cp" species:2848... 163 2.6e-13 4
UNIPROTKB|G3V419 - symbol:MLH3 "DNA mismatch repair prote... 162 1.1e-12 2
UNIPROTKB|H0YJB4 - symbol:MLH3 "DNA mismatch repair prote... 196 6.8e-12 1
UNIPROTKB|H0YJA3 - symbol:MLH3 "DNA mismatch repair prote... 162 1.4e-10 1
UNIPROTKB|Q22B61 - symbol:TTHERM_01109940 "DNA mismatch r... 163 6.8e-08 3
TAIR|locus:2133274 - symbol:PMS1 "POSTMEIOTIC SEGREGATION... 158 1.2e-07 2
DICTYBASE|DDB_G0283981 - symbol:pms1 "MutL DNA mismatch r... 149 1.6e-07 2
UNIPROTKB|Q69L72 - symbol:OSJNBa0016G10.12 "Os02g0592300 ... 147 2.6e-07 2
UNIPROTKB|F1NQJ2 - symbol:Gga.22468 "Uncharacterized prot... 156 2.8e-07 2
ZFIN|ZDB-GENE-030131-686 - symbol:pms2 "PMS2 postmeiotic ... 171 1.3e-06 3
TIGR_CMR|SPO_3362 - symbol:SPO_3362 "DNA mismatch repair ... 114 4.7e-06 3
RGD|1305483 - symbol:Pms2 "PMS2 postmeiotic segregation i... 154 6.1e-06 3
UNIPROTKB|F1NQJ3 - symbol:Gga.22468 "Uncharacterized prot... 142 7.8e-06 2
UNIPROTKB|C9J167 - symbol:PMS2 "Mismatch repair endonucle... 150 1.4e-05 2
UNIPROTKB|I3L0B5 - symbol:PMS2 "Mismatch repair endonucle... 150 1.7e-05 2
UNIPROTKB|P54278 - symbol:PMS2 "Mismatch repair endonucle... 150 1.9e-05 2
MGI|MGI:104288 - symbol:Pms2 "postmeiotic segregation inc... 152 2.4e-05 2
WB|WBGene00004064 - symbol:pms-2 species:6239 "Caenorhabd... 114 3.0e-05 3
UNIPROTKB|G5EFG5 - symbol:pms-2 "Protein PMS-2, isoform a... 114 3.0e-05 3
UNIPROTKB|D3ZZF0 - symbol:Pms2 "Protein Pms2" species:101... 154 3.1e-05 3
UNIPROTKB|A9WJ86 - symbol:mutL "DNA mismatch repair prote... 105 3.1e-05 4
UNIPROTKB|Q8TTB5 - symbol:mutL "DNA mismatch repair prote... 97 3.6e-05 2
UNIPROTKB|Q7SAM1 - symbol:NCU08020 "Putative uncharacteri... 151 4.2e-05 2
UNIPROTKB|F1RFM9 - symbol:PMS2 "Uncharacterized protein" ... 149 6.4e-05 3
TIGR_CMR|CHY_1396 - symbol:CHY_1396 "DNA mismatch repair ... 105 9.7e-05 3
ASPGD|ASPL0000093218 - symbol:AN11853 species:162425 "Eme... 135 0.00011 1
ASPGD|ASPL0000095187 - symbol:AN11854 species:162425 "Eme... 135 0.00011 1
UNIPROTKB|Q5AZG4 - symbol:AN6316.2 "ATP-binding protein (... 135 0.00011 1
TIGR_CMR|APH_0939 - symbol:APH_0939 "DNA mismatch repair ... 130 0.00016 1
UNIPROTKB|A8JCH6 - symbol:CHLREDRAFT_152712 "Predicted pr... 128 0.00017 2
UNIPROTKB|Q22CH2 - symbol:TTHERM_01044360 "Putative uncha... 125 0.00018 1
UNIPROTKB|F1PNW0 - symbol:PMS2 "Uncharacterized protein" ... 148 0.00027 3
UNIPROTKB|F1PNU2 - symbol:PMS2 "Uncharacterized protein" ... 148 0.00030 3
UNIPROTKB|A8IT98 - symbol:CHLREDRAFT_101121 "Predicted pr... 85 0.00033 2
TIGR_CMR|DET_1195 - symbol:DET_1195 "DNA mismatch repair ... 75 0.00040 3
>DICTYBASE|DDB_G0283883 [details] [associations]
symbol:mlh3 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283883 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AAFI02000057 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390 PANTHER:PTHR10073
KO:K08739 RefSeq:XP_638891.4 EnsemblProtists:DDB0232420
GeneID:8624288 KEGG:ddi:DDB_G0283883 InParanoid:Q54QI0 OMA:NECNIPF
Uniprot:Q54QI0
Length = 1658
Score = 295 (108.9 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 77/219 (35%), Positives = 116/219 (52%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGK-SVAY 959
I K L++ K + Q D KF+ A G + ++DQHA ERI+LE L K GE K +
Sbjct: 1459 IPKEMLQNFKFITQWDNKFLICEADGIVLILDQHAVSERIKLEILERKYF-GENKFDLCP 1517
Query: 960 LDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAV 1019
+ L E +L++ + + ++ WG+ +FNK T I + V
Sbjct: 1518 MPERTRWSLTEYELELMRIYTKPLEQWGF--------KWTFNK---------TSINISQV 1560
Query: 1020 P--CIFGVNLSDVDLLEFLQQLADTDGS-STTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1076
P C+ G+ ++D L EFL QL + G+ S PP+ R+L SKACR AI FG+ L C
Sbjct: 1561 PMFCLVGLGVND--LREFLYQLESSKGATSNRPPAAHRILASKACRTAIKFGNKLSREIC 1618
Query: 1077 ALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1115
++E+L + ++ FQCAHGRP+ +PL+N L + L
Sbjct: 1619 IKLLEDLNECNIPFQCAHGRPSIIPLINYGKLFSSVKGL 1657
Score = 102 (41.0 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 28/100 (28%), Positives = 49/100 (49%)
Query: 4 INSRYVCKGPIHKLLNHLAASFDCSDSW-KANNGFLK-GKRSKSQACPAYLLNLRCPHSL 61
+N+R V +H+ +N L + ++ KAN K K+ + P ++L LRC
Sbjct: 309 LNNRIVLNTKLHRHVNQLYQKYRLFNATRKANANVSKIAKKEVIDSNPIFILFLRCSQLE 368
Query: 62 YDLTFDPL-KTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 100
Y+ +++P KT + F DW+ LA I+ + K + D
Sbjct: 369 YERSYEPSSKTFLEFNDWKKPLAEIQNVLTKFLTKHRSDD 408
Score = 50 (22.7 bits), Expect = 2.2e-26, Sum P(3) = 2.2e-26
Identities = 39/198 (19%), Positives = 77/198 (38%)
Query: 195 PPKIDHRVWTIESSWFQDHQPSRHLFSPPLENLKKEGDHLFRKECERITFGDA---EKDP 251
PP+I + SS QD + + L SPP ++ +H + E + + EK+
Sbjct: 1256 PPQIQNN-----SSSDQDEEYNASLTSPPPSPKQQYQNHYEQNEKGNLFIKEEKEKEKEK 1310
Query: 252 AELQEENTEMEYVPQPKYSFGLSDGSFAKCLPIVPWKIDRHAWTIESSRFQYHQSSPHLY 311
+ +E+ E E + + L + + K D ++ H H
Sbjct: 1311 EKEKEKEKEKELEKEKELEKELEKEKELEKEKELKKKNDDEVQQVQEKEHDDHCCPTHNI 1370
Query: 312 SSPLENLSKEGDHLFREECERITFGEFEKHTPELKEEN-SKRELVSQPKYSSKLLDCPFA 370
L LS G+ +E + + G+ ++ + + + SK EL + Y+ + F
Sbjct: 1371 GDHL-TLSGIGN--IKEHQDDESLGDDDEEKEFIHDSDYSKIELAKKYNYTDDRISPFFD 1427
Query: 371 ECLSPVLRKIDLHGWTSG 388
+ + P + D++ SG
Sbjct: 1428 KSIKPGVEMKDININVSG 1445
Score = 41 (19.5 bits), Expect = 4.2e-20, Sum P(2) = 4.2e-20
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 868 NNNISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA 924
NNN++ + N +N I++G + + F + + L L+ + KK I ++A
Sbjct: 167 NNNVNNNNINNNNNNSIANGTIVKIRDLFKNYPVRRQGLYHPN-LKLIIKKRIEIIA 222
Score = 40 (19.1 bits), Expect = 2.6e-24, Sum P(4) = 2.6e-24
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 675 NSSEDFCKYLQEHDPCNKFSREHSD 699
N +D LQ DP SR+ +D
Sbjct: 674 NKKDDTASTLQTTDPYESSSRDVTD 698
Score = 38 (18.4 bits), Expect = 8.6e-20, Sum P(2) = 8.6e-20
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 868 NNNISCDIHNQDNI 881
NN+ SCD +N +N+
Sbjct: 158 NNSSSCD-NNNNNV 170
Score = 37 (18.1 bits), Expect = 4.9e-25, Sum P(3) = 4.9e-25
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 210 FQDHQPSRHLFSPPLENLKKEGD 232
F + + S L S P++ LK E D
Sbjct: 1055 FDEDEKSNTL-SSPIKKLKTEND 1076
Score = 37 (18.1 bits), Expect = 2.6e-24, Sum P(4) = 2.6e-24
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 316 ENLSKEGDHLFREECE--RITFGEFEKHTPELKEENSKRELVS 356
EN +G + ++ + +I E E+H LKE +++ ++
Sbjct: 503 ENEDHQGMQIGFDDLDNNQIDSSEDEEHLKRLKEIEEEKQYIN 545
>RGD|1309227 [details] [associations]
symbol:Mlh3 "mutL homolog 3 (E. coli)" species:10116 "Rattus
norvegicus" [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000795 "synaptonemal complex" evidence=ISO;IBA] [GO:0001673
"male germ cell nucleus" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005712 "chiasma"
evidence=ISO;IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=ISO;IBA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007130
"synaptonemal complex assembly" evidence=IEA;ISO] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007140 "male
meiosis" evidence=IEA;ISO] [GO:0007144 "female meiosis I"
evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0019237
"centromeric DNA binding" evidence=IEA;ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 RGD:1309227
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0016887
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 GO:GO:0003697
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0007130
EMBL:CH473982 GO:GO:0007144 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 CTD:27030
KO:K08739 GeneTree:ENSGT00550000074903 IPI:IPI00877366
RefSeq:NP_001101513.1 UniGene:Rn.119254 Ensembl:ENSRNOT00000033493
GeneID:314320 KEGG:rno:314320 UCSC:RGD:1309227 OrthoDB:EOG4K9BB9
NextBio:667464 Uniprot:D4ADG4
Length = 1442
Score = 198 (74.8 bits), Expect = 1.9e-23, Sum P(4) = 1.9e-23
Identities = 67/225 (29%), Positives = 105/225 (46%)
Query: 924 AGGTLAV-IDQHAADERIRLEELRHKVLSGEG-KSVAYLDAEQELVLPEIGY-------Q 974
AGG L V +DQHAA ER+RLE+L + +S ++P + +
Sbjct: 1202 AGGNLLVLVDQHAAHERVRLEQLITDSYEKQAPQSAGRKKLLSSTIIPPLAITVSEEQRR 1261
Query: 975 LLQNFAEQIKDWGWICNIHTQGSRSF---NKNLNLLQRQITVITLLAVPCIFGVNLSDVD 1031
LL+++ + ++D G S L ++R+ + P + + ++
Sbjct: 1262 LLRSYHKHLEDLGLELLFPDASDSSILVGKVPLCFVEREANELRRGRSPVTKSI-VEEL- 1319
Query: 1032 LLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1090
+ E L+ L T G T P +V +VL S+AC GAI F D L E ++E L L F
Sbjct: 1320 IREQLELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLCQLPF 1379
Query: 1091 QCAHGRPTTVPLVNLEALH--KQI----AQLNNSSELWHGLHRGE 1129
QCAHGRP+ +PL +L+ L KQ+ +L + WH + E
Sbjct: 1380 QCAHGRPSMLPLADLDHLEQEKQVKPNLTKLRKMAHAWHLFGKAE 1424
Score = 115 (45.5 bits), Expect = 1.9e-23, Sum P(4) = 1.9e-23
Identities = 29/94 (30%), Positives = 50/94 (53%)
Query: 4 INSRYVCKGPIHKLLNHLAA--SFDC-----SDSWKANNGFLKGKRSKSQACPAYLLNLR 56
+N R V + +HKL++ L S C S S + N+ RS S+ Y++N++
Sbjct: 254 VNRRLVLRTKLHKLIDFLLRKESIICRPKNGSASRQMNSS--PRHRSASELHGIYVINVQ 311
Query: 57 CPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 90
CP YD+ +P KT + F++W+ VL ++ I+
Sbjct: 312 CPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIK 345
Score = 103 (41.3 bits), Expect = 1.9e-23, Sum P(4) = 1.9e-23
Identities = 32/79 (40%), Positives = 40/79 (50%)
Query: 882 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 927
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1146 VDVSSGQAGSLAVKIHNVLYPYRFTKEMIHSVQVLQQVDNKFIACLMSSRTDGSGQAGGN 1205
Query: 928 LAV-IDQHAADERIRLEEL 945
L V +DQHAA ER+RLE+L
Sbjct: 1206 LLVLVDQHAAHERVRLEQL 1224
Score = 51 (23.0 bits), Expect = 1.9e-23, Sum P(4) = 1.9e-23
Identities = 21/71 (29%), Positives = 32/71 (45%)
Query: 304 HQSSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHTPELKEEN--SKRELVSQPKYS 361
H++SP ++SSP++ H EE E E + T + N E+ SQ +
Sbjct: 501 HETSPKMFSSPIQT------HHPLEESEADLEIEMKSSTVNVMAANIPPNSEIQSQLE-- 552
Query: 362 SKLLDCPFAEC 372
+L D P EC
Sbjct: 553 -QLEDAPEVEC 562
Score = 49 (22.3 bits), Expect = 2.8e-16, Sum P(3) = 2.8e-16
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 346 KEENSKRELVSQPKY--SSKL-------LDCPFAE---CLSPVLRKIDLHGW 385
K ++ R++ S P++ +S+L + CPF E C+ P I+ W
Sbjct: 282 KNGSASRQMNSSPRHRSASELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNW 333
>UNIPROTKB|E2QZJ2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019237 "centromeric DNA binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0007140 "male
meiosis" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0006298 GO:GO:0019237
GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:AAEX03005855
Ensembl:ENSCAFT00000026947 Uniprot:E2QZJ2
Length = 1424
Score = 206 (77.6 bits), Expect = 4.3e-23, Sum P(4) = 4.3e-23
Identities = 71/225 (31%), Positives = 111/225 (49%)
Query: 924 AGGTLAV-IDQHAADERIRLEEL-----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQ 974
AGG L V +DQHAA ER+RLE+L + G G+ + + ++ + E +
Sbjct: 1184 AGGNLLVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLSSTVSPPLKIRVTEEQRR 1243
Query: 975 LLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDVD 1031
LL+ + + ++D G I T S + L ++R+ + P N+ +
Sbjct: 1244 LLRCYHKNLEDLGLEILFPDTNDSLVLVGKVPLCFIEREANELRRGRSPVTR--NIVEEF 1301
Query: 1032 LLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1090
+ E ++ L T G T P +V +VL S+AC GAI F D L E ++E L L F
Sbjct: 1302 IREQVELLQTTGGIQRTLPLTVQKVLASQACHGAIKFNDGLSREESCRLIEALSWCQLPF 1361
Query: 1091 QCAHGRPTTVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1129
QCAHGRP+ +PL +++ L KQI A+L ++ WH + E
Sbjct: 1362 QCAHGRPSMLPLADIDHLGQEKQIKPNLAKLRKMAQAWHLFGKAE 1406
Score = 114 (45.2 bits), Expect = 4.3e-23, Sum P(4) = 4.3e-23
Identities = 29/100 (29%), Positives = 52/100 (52%)
Query: 4 INSRYVCKGPIHKLLNHLAA--SFDC-----SDSWKANNGFLKGKRSKSQACPAYLLNLR 56
+N R V + +HK ++ L S C S S + N+ R+ + Y++N++
Sbjct: 254 VNKRLVLRTKLHKFIDFLLRRESIICKPKNGSSSRQVNSS--PRHRANPELHGIYVINMQ 311
Query: 57 CPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 96
C YD+ +P KT + F+DW+ VL I+ A++ ++KK
Sbjct: 312 CQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVKM-FLKK 350
Score = 104 (41.7 bits), Expect = 4.3e-23, Sum P(4) = 4.3e-23
Identities = 32/79 (40%), Positives = 41/79 (51%)
Query: 882 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 927
+D+SSG L+ P K + +VLQQVD KFI + AGG
Sbjct: 1128 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1187
Query: 928 LAV-IDQHAADERIRLEEL 945
L V +DQHAA ER+RLE+L
Sbjct: 1188 LLVLVDQHAAHERVRLEQL 1206
Score = 39 (18.8 bits), Expect = 4.3e-23, Sum P(4) = 4.3e-23
Identities = 22/81 (27%), Positives = 31/81 (38%)
Query: 295 TIESSRFQYHQSSP-H--LYSSPLENLSK---EGDHLFREECERITFGEFEKHTPELKEE 348
T +S + Y P H + S L+ E L ++ E GE EKH E
Sbjct: 439 TNDSFLYNYESVDPSHSKVMESSLQTKDSSCSESGILEQQTAEVSESGENEKHKKLCLEL 498
Query: 349 NSKRELVSQPKYSSKLLDCPF 369
NS L + S++ PF
Sbjct: 499 NSSENL---SRIHSEMFASPF 516
Score = 38 (18.4 bits), Expect = 4.0e-16, Sum P(3) = 4.0e-16
Identities = 13/52 (25%), Positives = 23/52 (44%)
Query: 346 KEENSKRELVSQPKYSS--KL-------LDCPFAE---CLSPVLRKIDLHGW 385
K +S R++ S P++ + +L + C F E C+ P I+ W
Sbjct: 282 KNGSSSRQVNSSPRHRANPELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDW 333
>UNIPROTKB|E1BNK2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:DAAA02029619 IPI:IPI00924115
Ensembl:ENSBTAT00000061421 ArrayExpress:E1BNK2 Uniprot:E1BNK2
Length = 1452
Score = 207 (77.9 bits), Expect = 5.9e-23, Sum P(4) = 5.9e-23
Identities = 69/219 (31%), Positives = 108/219 (49%)
Query: 924 AGGTLAV-IDQHAADERIRLEEL-----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQ 974
AGG L V +DQHAA ERIRLE+L + G G+ + + E+ + E +
Sbjct: 1214 AGGNLLVLVDQHAAHERIRLEQLIIDSYEKQQPQGFGRKKLLSSIVSPPLEITVTEEQRR 1273
Query: 975 LLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDV- 1030
LL+ + + ++D G I T S + L ++R+ + + G+ +
Sbjct: 1274 LLRCYHKNLEDLGLEIVFPDTSDSLVLIGKVPLCFVEREASELRRGRSTVTKGIVEEFIR 1333
Query: 1031 DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1090
+ +E LQ G T P +V +VL S+AC GAI F D L E ++E L L F
Sbjct: 1334 EQVELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSFEESCRLIEALSWCQLPF 1391
Query: 1091 QCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWH 1123
QCAHGRP+ +PL N++ L ++ +A+L ++ WH
Sbjct: 1392 QCAHGRPSMLPLANIDHLEQEKQTKPNLAKLRRMAQAWH 1430
Score = 110 (43.8 bits), Expect = 5.9e-23, Sum P(4) = 5.9e-23
Identities = 33/124 (26%), Positives = 63/124 (50%)
Query: 4 INSRYVCKGPIHKLLNHLAA--SFDCSD-SWKANNGFLKGKRSKS--QACPAYLLNLRCP 58
+N R V + +HKL++ L S C S A+ R +S + Y++N++C
Sbjct: 254 VNKRLVLRTKLHKLIDFLLRKESIICKPKSGSASRQVNSNPRPRSNPELHGIYVINVQCQ 313
Query: 59 HSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK----IAHDSFDV-DMLEDAELP 113
YD+ +P KT + F++W+ +L I+ +++ ++KK + S D+ + ED +
Sbjct: 314 FCEYDVCLEPAKTLIEFQNWDTLLICIQEGVKT-FLKKEKLFVELSSEDIKEFSEDNDFS 372
Query: 114 LESS 117
L S+
Sbjct: 373 LFSA 376
Score = 104 (41.7 bits), Expect = 5.9e-23, Sum P(4) = 5.9e-23
Identities = 33/79 (41%), Positives = 40/79 (50%)
Query: 882 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 927
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 928 LAV-IDQHAADERIRLEEL 945
L V +DQHAA ERIRLE+L
Sbjct: 1218 LLVLVDQHAAHERIRLEQL 1236
Score = 41 (19.5 bits), Expect = 5.9e-23, Sum P(4) = 5.9e-23
Identities = 20/81 (24%), Positives = 31/81 (38%)
Query: 295 TIESSRFQYHQSSP-H--LYSSPLEN---LSKEGDHLFREECERITFGEFEKHTPELKEE 348
T +S + Y P H + S L+N + +L +E GE +KH E
Sbjct: 438 TNDSFLYTYKSDGPAHCKMAESSLQNEDSACSQSRNLEQETAGASELGENKKHKKSCLEH 497
Query: 349 NSKRELVSQPKYSSKLLDCPF 369
NS +S++ PF
Sbjct: 498 NSSENPCGT---TSEMFGSPF 515
Score = 40 (19.1 bits), Expect = 7.4e-23, Sum P(4) = 7.4e-23
Identities = 12/51 (23%), Positives = 25/51 (49%)
Query: 295 TIESSR-FQYHQSSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHTPE 344
T++S + F+ +P S P+ + +G+ LF ++ E + + PE
Sbjct: 919 TLDSCKLFKNEHKNPESDSIPMSDSVTQGN-LFSKDSETYSNNNTTEKIPE 968
Score = 39 (18.8 bits), Expect = 2.7e-16, Sum P(3) = 2.7e-16
Identities = 6/19 (31%), Positives = 8/19 (42%)
Query: 367 CPFAECLSPVLRKIDLHGW 385
C + CL P I+ W
Sbjct: 315 CEYDVCLEPAKTLIEFQNW 333
>UNIPROTKB|F1S2R6 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0006298
GO:GO:0019237 GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:CT737372
Ensembl:ENSSSCT00000002644 Uniprot:F1S2R6
Length = 1427
Score = 206 (77.6 bits), Expect = 1.8e-22, Sum P(4) = 1.8e-22
Identities = 74/233 (31%), Positives = 112/233 (48%)
Query: 924 AGGTLAV-IDQHAADERIRLEEL------RHKVLSGEGKSV---AYLDAEQELVLPEIGY 973
AGG L V +DQHAA ERIRLE+L + G G+ + ++ E+ + E
Sbjct: 1186 AGGNLLVLVDQHAAHERIRLEQLIAVDSYEKQQAQGSGRKKLLSSTVNPPLEIPVTEEQR 1245
Query: 974 QLLQNFAEQIKDWGWICNIHTQGSRSF---NKNLNLLQRQITVITLLAVPCIFGVNLSDV 1030
+LL+ + + ++D G R L ++R+ L ++ +
Sbjct: 1246 RLLRCYHKNLEDLGLEIIFPDTSDRLVLVGKVPLCFVEREAN--ELRRGRSTVTKSIVEE 1303
Query: 1031 DLLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1089
+ E ++ L T G T P +V +VL S+AC GAI F DSL E ++E L L
Sbjct: 1304 FIREQVELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDSLSLEESCRLIEALSWCQLP 1363
Query: 1090 FQCAHGRPTTVPLVNLEALH--KQI----AQLNNSSELWHGLHRGEISLKRAS 1136
FQCAHGRP+ +PL +++ L KQI A+L ++ WH + E S R S
Sbjct: 1364 FQCAHGRPSMLPLADVDHLEQEKQIKPNLAKLRRMTQAWHLFGKAEGSDTRQS 1416
Score = 104 (41.7 bits), Expect = 1.8e-22, Sum P(4) = 1.8e-22
Identities = 33/79 (41%), Positives = 40/79 (50%)
Query: 882 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 927
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1130 VDVSSGQAESLAVKIHNILYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEEDGEAGGN 1189
Query: 928 LAV-IDQHAADERIRLEEL 945
L V +DQHAA ERIRLE+L
Sbjct: 1190 LLVLVDQHAAHERIRLEQL 1208
Score = 104 (41.7 bits), Expect = 1.8e-22, Sum P(4) = 1.8e-22
Identities = 25/98 (25%), Positives = 51/98 (52%)
Query: 4 INSRYVCKGPIHKLLNHLAA--SFDCSD-SWKANNGFLKGKRSKS--QACPAYLLNLRCP 58
+N R + + +HKL++ L S C + A+ G R + + Y++N++C
Sbjct: 254 VNKRLILRTKLHKLIDFLLRKESIICKPKNGSASRQMNCGPRPRPNPELHGIYVINMQCQ 313
Query: 59 HSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 96
YD+ +P KT + F++W+ +L I+ ++ ++KK
Sbjct: 314 FCEYDVCLEPAKTLIEFQNWDTLLVCIQEGVKM-FLKK 350
Score = 43 (20.2 bits), Expect = 1.8e-22, Sum P(4) = 1.8e-22
Identities = 26/89 (29%), Positives = 37/89 (41%)
Query: 283 PIVPWKIDRHA-----WTIESSRFQYHQSS--P--HLYSSPLENLSKEGDHLFRE-ECER 332
P +PWK + H I + + +SS P H++ S SKE D L ++ C R
Sbjct: 791 PDIPWKDENHLDNSGICKITTLKHNDSRSSCQPASHMFYSEKFPFSKEEDCLEQQMPCLR 850
Query: 333 ---ITFGEFEKHTPE-LKEENSKRELVSQ 357
IT E + L E S L S+
Sbjct: 851 ESPITLNELSHFNRKPLDGEKSPESLASK 879
Score = 40 (19.1 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 365 LDCPFAE---CLSPVLRKIDLHGW 385
+ C F E CL P I+ W
Sbjct: 310 MQCQFCEYDVCLEPAKTLIEFQNW 333
>UNIPROTKB|E2QZI8 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR014790 Pfam:PF08676 SMART:SM00853
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 PANTHER:PTHR10073 GeneTree:ENSGT00550000074903
EMBL:AAEX03005855 Ensembl:ENSCAFT00000026951 Uniprot:E2QZI8
Length = 467
Score = 206 (77.6 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 71/225 (31%), Positives = 111/225 (49%)
Query: 924 AGGTLAV-IDQHAADERIRLEEL-----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQ 974
AGG L V +DQHAA ER+RLE+L + G G+ + + ++ + E +
Sbjct: 227 AGGNLLVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLSSTVSPPLKIRVTEEQRR 286
Query: 975 LLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDVD 1031
LL+ + + ++D G I T S + L ++R+ + P N+ +
Sbjct: 287 LLRCYHKNLEDLGLEILFPDTNDSLVLVGKVPLCFIEREANELRRGRSPVTR--NIVEEF 344
Query: 1032 LLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1090
+ E ++ L T G T P +V +VL S+AC GAI F D L E ++E L L F
Sbjct: 345 IREQVELLQTTGGIQRTLPLTVQKVLASQACHGAIKFNDGLSREESCRLIEALSWCQLPF 404
Query: 1091 QCAHGRPTTVPLVNLEAL--HKQI----AQLNNSSELWHGLHRGE 1129
QCAHGRP+ +PL +++ L KQI A+L ++ WH + E
Sbjct: 405 QCAHGRPSMLPLADIDHLGQEKQIKPNLAKLRKMAQAWHLFGKAE 449
Score = 104 (41.7 bits), Expect = 6.8e-19, Sum P(2) = 6.8e-19
Identities = 32/79 (40%), Positives = 41/79 (51%)
Query: 882 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 927
+D+SSG L+ P K + +VLQQVD KFI + AGG
Sbjct: 171 VDVSSGQAKSLVVKIHNVLYPYRFTKEMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 230
Query: 928 LAV-IDQHAADERIRLEEL 945
L V +DQHAA ER+RLE+L
Sbjct: 231 LLVLVDQHAAHERVRLEQL 249
>UNIPROTKB|E1C7F3 [details] [associations]
symbol:LOC100859200 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:AADN02003465 IPI:IPI00593431
ProteinModelPortal:E1C7F3 Ensembl:ENSGALT00000016763 Uniprot:E1C7F3
Length = 1424
Score = 217 (81.4 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 73/263 (27%), Positives = 125/263 (47%)
Query: 870 NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLA 929
N++ IHN + ++H D+ +C+ + + ++DKK G L
Sbjct: 1141 NLAVKIHNVLYPYRFTKDMIHSMQVLQQVDNKFIACVINTR--NEMDKK----EGGNLLV 1194
Query: 930 VIDQHAADERIRLEEL------RHKVLSGEGKSVAY-LDAEQELVLPEIGYQLLQNFAEQ 982
++DQHAA ERIRLE+L + G+ K ++ + E+ + E ++L +
Sbjct: 1195 LVDQHAAHERIRLEQLIADSYDKEATACGKKKLLSSSVSPPLEIEVTEEQRRILWCCYKN 1254
Query: 983 IKDWGWICNI-HTQGSRSFNKNLNL--LQRQITVITLLAVPCIFGVNLSDV-DLLEFLQQ 1038
+KD G + T S K + L ++R+ + P + + + +E +Q
Sbjct: 1255 LKDLGLELSFPETNSSMILVKKVPLCFIEREANELRRKRQPVTKSIVEELIQEQVELVQT 1314
Query: 1039 LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1098
+ G T P + L+VL S+AC GAI F DSL E ++E L L FQCAHGRP+
Sbjct: 1315 MRGAQG--TLPLTFLKVLASQACHGAIKFNDSLTSEESCRLMEALSSCQLPFQCAHGRPS 1372
Query: 1099 TVPLVNLEALHKQIAQLNNSSEL 1121
+PL +++ L +++ N + L
Sbjct: 1373 MMPLADIDHLQEEMQPKPNLARL 1395
Score = 109 (43.4 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 4 INSRYVCKGPIHKLLNHLAASFDCSDSWKANNGFLKGKRSKSQA-C-PA----YLLNLRC 57
+N R V K +HKL++ L K+ +G S + C P ++LN+ C
Sbjct: 254 VNRRLVLKTRLHKLIDFLLRKESVICKAKSVPASKQGSSSPGRLRCGPELYGIFVLNVTC 313
Query: 58 PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 90
+S YD++ +P KT + F++W+ +LA +E ++
Sbjct: 314 AYSDYDVSLEPTKTLIEFQNWDVLLACVEEGVK 346
Score = 41 (19.5 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 252 AELQEENTEMEYVPQPKYSFGLSDGS 277
A+ N EY+P G +DGS
Sbjct: 670 AKYISNNMNKEYIPLCSREVGTTDGS 695
Score = 41 (19.5 bits), Expect = 1.4e-17, Sum P(4) = 1.4e-17
Identities = 16/74 (21%), Positives = 34/74 (45%)
Query: 290 DRHAWTIESSRFQYHQSSPHLYSSPLENLSKEGDHLFREECERITFGEFEKHTPELKEEN 349
D H++ +ESS + + Y S +E + R+ C ++ G+ + +L+ E+
Sbjct: 912 DNHSYGLESSNNDFLYNPCQRYKSSVEEM--------RDGCS-VSKGDACPQSVDLRAES 962
Query: 350 SKRELVSQPKYSSK 363
K + P S++
Sbjct: 963 MKCTVSLSPLSSTE 976
Score = 41 (19.5 bits), Expect = 4.5e-11, Sum P(3) = 4.5e-11
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 316 ENLSKEGDHLFREECERITFGEFEKHT 342
E+LSK G F +C + + EK T
Sbjct: 64 EDLSKMGKRYFTSKCSSVA--DLEKLT 88
Score = 40 (19.1 bits), Expect = 5.3e-18, Sum P(3) = 5.3e-18
Identities = 15/63 (23%), Positives = 27/63 (42%)
Query: 618 IYNNALEG-HSILGEGTSCGQLADTEENYKFDYDSKLRRSNQEKCTTARSGLRFEYYDNS 676
++++ EG S + + SC L EN D ++ + Q+ T S F + +
Sbjct: 504 LHSSFTEGARSEIIKTDSCADLRRCAENCAKDVGNQQDKDVQKSNTVCISNNGFTQWPSE 563
Query: 677 SED 679
ED
Sbjct: 564 RED 566
>SGD|S000006085 [details] [associations]
symbol:MLH3 "Protein involved in mismatch repair and meiotic
recombination" species:4932 "Saccharomyces cerevisiae" [GO:0005712
"chiasma" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IPI] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0030983 "mismatched DNA binding"
evidence=IEA;IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR014790
Pfam:PF08676 SMART:SM00853 SGD:S000006085 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 EMBL:BK006949 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:X96770 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 KO:K08739 EMBL:Z73520 PIR:S65175
RefSeq:NP_015161.1 ProteinModelPortal:Q12083 SMR:Q12083
DIP:DIP-2414N IntAct:Q12083 MINT:MINT-678752 STRING:Q12083
EnsemblFungi:YPL164C GeneID:855939 KEGG:sce:YPL164C CYGD:YPL164c
GeneTree:ENSGT00550000074903 HOGENOM:HOG000113600 OMA:KACRSAI
OrthoDB:EOG46X2HJ NextBio:980696 Genevestigator:Q12083
GermOnline:YPL164C Uniprot:Q12083
Length = 715
Score = 163 (62.4 bits), Expect = 8.8e-17, Sum P(3) = 8.8e-17
Identities = 44/140 (31%), Positives = 70/140 (50%)
Query: 971 IGYQLLQNFAE----QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVN 1026
IGY+ ++ E +IK + G + + K + LLQ + +P ++
Sbjct: 581 IGYETIEGTMETSLLEIKTLPEMLTSKYNGDKDYLKMV-LLQHAHDLKDFKKLP----MD 635
Query: 1027 LSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1086
LS + + +L SS P +LNSKACR A+MFGD L EC +++ +L +
Sbjct: 636 LSHFENYTSVDKLYWWKYSSCVPTVFHEILNSKACRSAVMFGDELTRQECIILISKLSRC 695
Query: 1087 SLCFQCAHGRPTTVPLVNLE 1106
F+CAHGRP+ VP+ L+
Sbjct: 696 HNPFECAHGRPSMVPIAELK 715
Score = 113 (44.8 bits), Expect = 8.8e-17, Sum P(3) = 8.8e-17
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 900 SINKSCLEDAKVLQQVDKKFIPV------VAGGTLAV-IDQHAADERIRLEELRHKVLSG 952
SI++S L +V+ QVDKKFI + + L V +DQHA DERIRLEEL + +L+
Sbjct: 484 SISRSVLAKYEVINQVDKKFILIRCLDQSIHNCPLLVLVDQHACDERIRLEELFYSLLTE 543
Query: 953 --EGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 987
G VA + + + L +++ + K WG
Sbjct: 544 VVTGTFVARDLKDCCIEVDRTEADLFKHYQSEFKKWG 580
Score = 69 (29.3 bits), Expect = 8.8e-17, Sum P(3) = 8.8e-17
Identities = 18/52 (34%), Positives = 27/52 (51%)
Query: 40 GKRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 91
GK +S P ++L++RCP ++ DL DP K V + I + IRS
Sbjct: 319 GKPYRSH--PVFILDVRCPQTIDDLLQDPAKKIVKPSHIRTIEPLIVKTIRS 368
>ZFIN|ZDB-GENE-060810-45 [details] [associations]
symbol:mlh3 "mutL homolog 3 (E. coli)" species:7955
"Danio rerio" [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 ZFIN:ZDB-GENE-060810-45 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 GeneTree:ENSGT00550000074903 EMBL:BX957326
IPI:IPI00488975 Ensembl:ENSDART00000143694 Bgee:E9QGN2
Uniprot:E9QGN2
Length = 1171
Score = 153 (58.9 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 36/81 (44%), Positives = 44/81 (54%)
Query: 1032 LLEFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCF 1090
L E ++ L T P +V VL S+AC GAI F D L EC +V L L F
Sbjct: 1059 LREHIELLRSTGRVRGILPLTVHNVLASQACHGAIKFNDVLNKEECCSLVSSLSSCRLPF 1118
Query: 1091 QCAHGRPTTVPLVNLEALHKQ 1111
QCAHGRP+ VPL +L L +Q
Sbjct: 1119 QCAHGRPSIVPLADLHHLEEQ 1139
Score = 114 (45.2 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 4 INSRYVCKGPIHKLLNHLAASFDCSDSWKANNG-----FLKGKRSKS--QACPAYLLNLR 56
+N R + K IHK LN L S + + NN + K Y++N++
Sbjct: 254 VNERLLLKTRIHKTLNCLLKRV--SGAARQNNSPTSYPVTSSPKQKGGYDLHGIYVINIK 311
Query: 57 CPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 96
C +S YD+ +P K+ + FKDW+ VL IE ++ A++ K
Sbjct: 312 CHYSEYDICLEPAKSLIEFKDWDNVLICIEEGVK-AFLTK 350
Score = 82 (33.9 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 24/75 (32%), Positives = 34/75 (45%)
Query: 885 SSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVA--------------GGTLAV 930
+ GL P K+ + +V+ QVDKKF+ + G L +
Sbjct: 890 AEGLAVKIHNILFPYRFTKNMIHTMRVINQVDKKFLACLINTAGQNTSESSTDEGNLLVL 949
Query: 931 IDQHAADERIRLEEL 945
+DQHAA ER+RLE L
Sbjct: 950 VDQHAAHERVRLEGL 964
Score = 42 (19.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 982 QIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC 1021
+ KDW + +G ++F NL+ ++ I+ +PC
Sbjct: 329 EFKDWDNVLICIEEGVKAFLTKENLVS-ELNTISNDGLPC 367
>UNIPROTKB|Q9UHC1 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005712 "chiasma"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=NAS;IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=NAS;IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003696 "satellite
DNA binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0016887 GO:GO:0006298
GO:GO:0019237 Reactome:REACT_111183 GO:GO:0001673 GO:GO:0003697
EMBL:AL049780 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
MIM:114500 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0007130 Orphanet:144 GO:GO:0003696 GO:GO:0007144
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AF195657 EMBL:AF195658
EMBL:AB039667 EMBL:AY963685 EMBL:L40399 IPI:IPI00005811
IPI:IPI00218050 RefSeq:NP_001035197.1 UniGene:Hs.436650
ProteinModelPortal:Q9UHC1 SMR:Q9UHC1 IntAct:Q9UHC1 STRING:Q9UHC1
PhosphoSite:Q9UHC1 DMDM:13878584 PaxDb:Q9UHC1 PRIDE:Q9UHC1
DNASU:27030 Ensembl:ENST00000238662 Ensembl:ENST00000355774
Ensembl:ENST00000556740 GeneID:27030 KEGG:hsa:27030 UCSC:uc001xrd.1
UCSC:uc001xre.1 CTD:27030 GeneCards:GC14M075481 HGNC:HGNC:7128
MIM:604395 MIM:614385 neXtProt:NX_Q9UHC1 PharmGKB:PA30845
HOGENOM:HOG000140944 HOVERGEN:HBG006375 InParanoid:Q9UHC1 KO:K08739
OMA:HGAIKFN PhylomeDB:Q9UHC1 ChiTaRS:MLH3 GenomeRNAi:27030
NextBio:49558 ArrayExpress:Q9UHC1 Bgee:Q9UHC1 CleanEx:HS_MLH3
Genevestigator:Q9UHC1 GermOnline:ENSG00000119684 Uniprot:Q9UHC1
Length = 1453
Score = 196 (74.1 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 79/283 (27%), Positives = 125/283 (44%)
Query: 870 NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLA 929
+++ IHN + G++H D+ +CL K + + AGG L
Sbjct: 1167 SLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGE-------AGGNLL 1219
Query: 930 V-IDQHAADERIRLEEL-----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQLLQNFA 980
V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL +
Sbjct: 1220 VLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYH 1279
Query: 981 EQIKDWGW-ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQL 1039
+ ++D G T S + L + L ++ + + E L+ L
Sbjct: 1280 KNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLELL 1339
Query: 1040 ADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1098
T G T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+
Sbjct: 1340 QTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPS 1399
Query: 1099 TVPLVNLEALH--KQI----AQLNNSSELWHGLHRGEISLKRA 1135
+PL +++ L KQI +L ++ W + E +++
Sbjct: 1400 MLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1442
Score = 103 (41.3 bits), Expect = 3.7e-16, Sum P(2) = 3.7e-16
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 4 INSRYVCKGPIHKLLNHLAA--SFDCSD----SWKANNGFLKGKRSKSQACPAYLLNLRC 57
+N R V + +HKL++ L S C + + N L+ RS + Y++N++C
Sbjct: 254 VNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLR-HRSTPELYGIYVINVQC 312
Query: 58 PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 90
YD+ +P KT + F++W+ +L I+ ++
Sbjct: 313 QFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 46 (21.3 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 340 KHTPELKEENSKRELVSQPK-YSSKLLD--CPFAE---CLSPVLRKIDLHGW 385
K+ P ++ NS S P+ Y +++ C F E C+ P I+ W
Sbjct: 282 KNGPTSRQMNSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNW 333
>UNIPROTKB|Q9Y6S7 [details] [associations]
symbol:unknown "Putative uncharacterized protein unknown"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR014790
Pfam:PF08676 SMART:SM00853 GO:GO:0005524 GO:GO:0006298
EMBL:AL049780 GO:GO:0030983 EMBL:AC006530 PANTHER:PTHR10073
UniGene:Hs.436650 HGNC:HGNC:7128 IPI:IPI00747818 SMR:Q9Y6S7
STRING:Q9Y6S7 Ensembl:ENST00000380968 HOGENOM:HOG000153890
HOVERGEN:HBG079075 Uniprot:Q9Y6S7
Length = 391
Score = 221 (82.9 bits), Expect = 6.3e-15, P = 6.3e-15
Identities = 82/264 (31%), Positives = 123/264 (46%)
Query: 898 PDSINKSCLEDAKVLQQVDKKFIPVV----------AGGTLAV-IDQHAADERIRLEEL- 945
P K + +VLQQVD KFI + AGG L V +DQHAA ERIRLE+L
Sbjct: 124 PYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGNLLVLVDQHAAHERIRLEQLI 183
Query: 946 ----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSR 998
+ G G+ + L E+ + E +LL + + ++D G + + S
Sbjct: 184 IDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYHKNLEDLG-LEFVFPDTSD 242
Query: 999 SFNKNLNLLQR-QITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLN 1057
S L L+ + + + A G + ++E LQ G T P +V +VL
Sbjct: 243 S----LVLVGKVPLCFVEREANELRRGRSTVTKSIVELLQTTGGIQG--TLPLTVQKVLA 296
Query: 1058 SKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALH--KQI--- 1112
S+AC GAI F D L E ++E L L FQCAHGRP+ +PL +++ L KQI
Sbjct: 297 SQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADIDHLEQEKQIKPN 356
Query: 1113 -AQLNNSSELWHGLHRGEISLKRA 1135
+L ++ W + E +++
Sbjct: 357 LTKLRKMAQAWRLFGKAECDTRQS 380
>UNIPROTKB|Q5B515 [details] [associations]
symbol:AN4365.2 "DNA mismatch repair protein (Mlh3),
putative (AFU_orthologue; AFUA_4G06490)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014790 Pfam:PF08676 SMART:SM00387 SMART:SM00853
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:BN001303 GO:GO:0030983
GO:GO:0007131 GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323
GO:GO:0005712 GO:GO:0032390 PANTHER:PTHR10073 KO:K08739
OrthoDB:EOG46X2HJ EMBL:AACD01000075 RefSeq:XP_661969.1
ProteinModelPortal:Q5B515 EnsemblFungi:CADANIAT00006093
GeneID:2872164 KEGG:ani:AN4365.2 HOGENOM:HOG000188023 OMA:HAADERC
Uniprot:Q5B515
Length = 870
Score = 238 (88.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 72/220 (32%), Positives = 106/220 (48%)
Query: 901 INKSCLEDAKVLQQVDKKFI----PVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS 956
++K L+ A+V+ QVD+KFI P TL +IDQHAADER R+E L +G
Sbjct: 620 LHKCDLQTARVIGQVDQKFILVEIPDANASTLVLIDQHAADERCRIERLYSGFFNGS--E 677
Query: 957 VAYLDAEQELV-LPEIGYQLLQNFAEQIKDWGWICNI-HTQGSRSFNKNLNLLQRQITVI 1014
V ++ E ++ +P + L + AE + WG I H S + +++ L I
Sbjct: 678 VQTIEVEPIVIAIPPVETSLFRQQAEFFQSWGIEYMIGHASESGKASISVSALPTLIAER 737
Query: 1015 TLLAVPCIFGVNLSDV-DLLEFLQQLADTDGSSTT----------PPSVLRVLNSKACRG 1063
+ G+ +++ E Q + G+ + P + +LNS+ACR
Sbjct: 738 CRAEPEQLIGILRAEIWKRTEERPQTFNAKGTDSAEDWVRQIAGCPQGIRDMLNSRACRT 797
Query: 1064 AIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLV 1103
AIMF D L EC +V L FQCAHGRP+ VPLV
Sbjct: 798 AIMFNDVLSVDECRTLVSRLASCVFPFQCAHGRPSMVPLV 837
Score = 39 (18.8 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 389 NRFSLKGSYFLETCFLA 405
+RF SY + CFLA
Sbjct: 84 SRFGTSSSYGRKGCFLA 100
>POMBASE|SPAC19G12.02c [details] [associations]
symbol:pms1 "MutL family mismatch-repair protein Pms1"
species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear
chromosome" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006298 "mismatch repair" evidence=IGI;IMP]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 PomBase:SPAC19G12.02c Prosite:PS00058
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000228 GO:GO:0043570 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:X96581 PIR:T37989
RefSeq:NP_594417.1 ProteinModelPortal:P54280 STRING:P54280
EnsemblFungi:SPAC19G12.02c.1 GeneID:2542582 KEGG:spo:SPAC19G12.02c
HOGENOM:HOG000165474 OMA:LDKPWNC OrthoDB:EOG4FFH9B NextBio:20803632
Uniprot:P54280
Length = 794
Score = 208 (78.3 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 75/244 (30%), Positives = 115/244 (47%)
Query: 869 NNISCDIHNQDNILDISS--GLLHLTGEFFIPDSIN----KSCLEDAKVLQQVDKKFIPV 922
+ + DI D +L S+ G++H + D +N K+ +V+ Q ++ FI V
Sbjct: 565 SGVQKDIVRSDALLKFSNKIGVVHDISDENQEDHLNLTVHKADFLRMRVVGQFNRGFIVV 624
Query: 923 VAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQ 982
V G L +IDQHA+DE+ E L+ ++ Q+LVLP+ L A +
Sbjct: 625 VHGNNLFIIDQHASDEKFNYEHLKSNLVINS----------QDLVLPK----RLDLAATE 670
Query: 983 IKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADT 1042
+ I +I + F ++L QR TLL+VP V DLLE + L++
Sbjct: 671 --ETVLIDHIDLIRRKGFGVAIDLNQRVGNRCTLLSVPTSKNVIFDTSDLLEIISVLSEH 728
Query: 1043 DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1102
+ R+L SKACR ++M G +L SE IV L + S + C HGRPT L
Sbjct: 729 PQIDPFSSRLERMLASKACRSSVMIGRALTISEMNTIVRHLAELSKPWNCPHGRPTMRHL 788
Query: 1103 VNLE 1106
+ L+
Sbjct: 789 LRLK 792
Score = 58 (25.5 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 12/49 (24%), Positives = 27/49 (55%)
Query: 43 SKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 91
S +Q+ P + +NLR + D+ P K V + + ++ FI+ ++++
Sbjct: 282 SMAQS-PFFAINLRITNGTIDINVSPDKKSVFLSEEDSIIEFIKNSLQN 329
>CGD|CAL0003904 [details] [associations]
symbol:orf19.7257 species:5476 "Candida albicans" [GO:0032390
"MutLbeta complex" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014790 Pfam:PF08676 SMART:SM00387 SMART:SM00853
CGD:CAL0003904 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 eggNOG:COG0323 EMBL:AACQ01000092
PANTHER:PTHR10073 KO:K08739 RefSeq:XP_715055.1
ProteinModelPortal:Q59ZT5 STRING:Q59ZT5 GeneID:3643294
KEGG:cal:CaO19.7257 Uniprot:Q59ZT5
Length = 636
Score = 221 (82.9 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 66/204 (32%), Positives = 103/204 (50%)
Query: 907 EDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQEL 966
E +V+ QVD+KFI + A L V+DQHA+DERIR+E+ + +S + L +
Sbjct: 437 EKFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQPNPGLR-LHSPIAF 495
Query: 967 VLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVN 1026
+ L +A +G IC T ++ +L L+ +T + A +
Sbjct: 496 GVHASELMLFDQYAANFNSFG-ICYT-TDTAQVVITHLPLIL--LTKVEDDAEFLKDSLL 551
Query: 1027 LSDVDLLEFLQQLADT-----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1081
DL + +++++ + S P + ++NSKACR AIMFGD L E +V
Sbjct: 552 QHCYDLHDHVKRISPNFDNWFETSYHLPRIITELINSKACRSAIMFGDILTKDEMQDLVN 611
Query: 1082 ELKQTSLCFQCAHGRPTTVPLVNL 1105
+L + L FQCAHGRP+ VP+ NL
Sbjct: 612 KLSRCKLPFQCAHGRPSIVPIANL 635
Score = 40 (19.1 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 747 SAPPFHRHKRRYI 759
S PP HR +YI
Sbjct: 362 STPPIHRTSDKYI 374
>UNIPROTKB|Q75F21 [details] [associations]
symbol:AAL093C "AAL093Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR014790
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 InterPro:IPR020568
SUPFAM:SSF54211 EMBL:AE016814 GenomeReviews:AE016814_GR
GO:GO:0007131 GO:GO:0032407 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 KO:K08739
OMA:KACRSAI OrthoDB:EOG46X2HJ RefSeq:NP_982449.1
ProteinModelPortal:Q75F21 STRING:Q75F21 EnsemblFungi:AAS50273
GeneID:4618574 KEGG:ago:AGOS_AAL093C PhylomeDB:Q75F21
Uniprot:Q75F21
Length = 734
Score = 163 (62.4 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 1050 PSV-LRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
P+V L +LNSKACR AIMFGD L EC +V +L ++ +CAHGRP+ +P+ +L+ L
Sbjct: 660 PTVFLEILNSKACRSAIMFGDKLNHDECLFLVRQLSTCNMPLRCAHGRPSVIPIADLKGL 719
Score = 101 (40.6 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 45/163 (27%), Positives = 72/163 (44%)
Query: 840 PHAHLGAQAEGTSIISGTKWRNGHPQTTNNNISCDIHNQDNILDISSGLLHLTGEFFIPD 899
P A + + A+ T I+ +T N N+ + ISS L + E D
Sbjct: 433 PVASMNSSADATKILEHV----AKIRTRNINVGLPVQKPVGSGSISSSLA-FSDEHLSVD 487
Query: 900 SINKSCLEDAKVLQQVDKKFI-----PVVAGGT--LAVIDQHAADERIRLE----ELRHK 948
SI L+D V+ Q+ KFI P + T L ++DQHAADER++LE +
Sbjct: 488 SIQ---LKDCIVINQIGNKFILLKLEPSRSRTTPLLLILDQHAADERVKLEAYTRDYLFT 544
Query: 949 VLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGW-IC 990
+L+ + S + L +L ++ +I+ WG+ IC
Sbjct: 545 LLTAQ-PSFYTTPCSIAMDLTHTEADILLHYKREIEFWGFEIC 586
Score = 53 (23.7 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 28/96 (29%), Positives = 43/96 (44%)
Query: 28 SDSWKANNGFLKGKRSKSQAC---PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAF 84
S +K +N R QA P YLL + P S+ DL +P K + ++ VL
Sbjct: 295 SARYKEDNMLAASTRGGQQAYSGYPVYLLVCKGPPSISDLLQNPSKV-IENLEYGRVLQP 353
Query: 85 IERAIRSAWMKKIAHD--SF-DVDMLED---AELPL 114
+ + ++++ H SF D M + AELPL
Sbjct: 354 LLCQVAKSFLRHYGHATVSFLDRKMTRNRLRAELPL 389
Score = 45 (20.9 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 906 LEDAKVLQ----QVDKKFIPVVAGGTLAVIDQHAADERIRLE 943
LE +VLQ QV K F+ T++ +D+ R+R E
Sbjct: 345 LEYGRVLQPLLCQVAKSFLRHYGHATVSFLDRKMTRNRLRAE 386
Score = 37 (18.1 bits), Expect = 2.6e-13, Sum P(4) = 2.6e-13
Identities = 5/21 (23%), Positives = 11/21 (52%)
Query: 212 DHQPSRHLFSPPLENLKKEGD 232
+ P R ++PP+ ++ D
Sbjct: 422 NQHPKRKKYNPPVASMNSSAD 442
>UNIPROTKB|G3V419 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 Pfam:PF01119 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 EMBL:AL049780
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V419 SMR:G3V419 Ensembl:ENST00000556257
ArrayExpress:G3V419 Bgee:G3V419 Uniprot:G3V419
Length = 1275
Score = 162 (62.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 40/109 (36%), Positives = 58/109 (53%)
Query: 1034 EFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1092
E L+ L T G T P +V +VL S+AC GAI F D L E ++E L L FQC
Sbjct: 1156 EQLELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQC 1215
Query: 1093 AHGRPTTVPLVNLEALH--KQI----AQLNNSSELWHGLHRGEISLKRA 1135
AHGRP+ +PL +++ L KQI +L ++ W + E +++
Sbjct: 1216 AHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1264
Score = 103 (41.3 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 25/93 (26%), Positives = 48/93 (51%)
Query: 4 INSRYVCKGPIHKLLNHLAA--SFDCSD----SWKANNGFLKGKRSKSQACPAYLLNLRC 57
+N R V + +HKL++ L S C + + N L+ RS + Y++N++C
Sbjct: 254 VNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLR-HRSTPELYGIYVINVQC 312
Query: 58 PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 90
YD+ +P KT + F++W+ +L I+ ++
Sbjct: 313 QFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
Score = 46 (21.3 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 14/52 (26%), Positives = 23/52 (44%)
Query: 340 KHTPELKEENSKRELVSQPK-YSSKLLD--CPFAE---CLSPVLRKIDLHGW 385
K+ P ++ NS S P+ Y +++ C F E C+ P I+ W
Sbjct: 282 KNGPTSRQMNSSLRHRSTPELYGIYVINVQCQFCEYDVCMEPAKTLIEFQNW 333
>UNIPROTKB|H0YJB4 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR014790
Pfam:PF08676 SMART:SM00853 GO:GO:0005524 GO:GO:0006298
EMBL:AL049780 GO:GO:0030983 PANTHER:PTHR10073 HGNC:HGNC:7128
ChiTaRS:MLH3 Ensembl:ENST00000553713 Uniprot:H0YJB4
Length = 477
Score = 196 (74.1 bits), Expect = 6.8e-12, P = 6.8e-12
Identities = 79/283 (27%), Positives = 125/283 (44%)
Query: 870 NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLA 929
+++ IHN + G++H D+ +CL K + + AGG L
Sbjct: 191 SLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGE-------AGGNLL 243
Query: 930 V-IDQHAADERIRLEEL-----RHKVLSGEGKSV---AYLDAEQELVLPEIGYQLLQNFA 980
V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL +
Sbjct: 244 VLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCYH 303
Query: 981 EQIKDWGW-ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQL 1039
+ ++D G T S + L + L ++ + + E L+ L
Sbjct: 304 KNLEDLGLEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIREQLELL 363
Query: 1040 ADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1098
T G T P +V +VL S+AC GAI F D L E ++E L L FQCAHGRP+
Sbjct: 364 QTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPS 423
Query: 1099 TVPLVNLEALH--KQI----AQLNNSSELWHGLHRGEISLKRA 1135
+PL +++ L KQI +L ++ W + E +++
Sbjct: 424 MLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 466
>UNIPROTKB|H0YJA3 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 GO:GO:0005524 GO:GO:0008104 GO:GO:0003682
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 EMBL:AL049780
GO:GO:0007140 GO:GO:0030983 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 PANTHER:PTHR10073 HGNC:HGNC:7128
ChiTaRS:MLH3 Ensembl:ENST00000554697 Bgee:H0YJA3 Uniprot:H0YJA3
Length = 124
Score = 162 (62.1 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 40/109 (36%), Positives = 58/109 (53%)
Query: 1034 EFLQQLADTDG-SSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1092
E L+ L T G T P +V +VL S+AC GAI F D L E ++E L L FQC
Sbjct: 5 EQLELLQTTGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQC 64
Query: 1093 AHGRPTTVPLVNLEALH--KQI----AQLNNSSELWHGLHRGEISLKRA 1135
AHGRP+ +PL +++ L KQI +L ++ W + E +++
Sbjct: 65 AHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 113
>UNIPROTKB|Q22B61 [details] [associations]
symbol:TTHERM_01109940 "DNA mismatch repair protein,
C-terminal domain containing protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
ProtClustDB:CLSZ2846737 EMBL:GG662565 RefSeq:XP_001030203.2
UniGene:Tth.6164 ProteinModelPortal:Q22B61 EnsemblProtists:EAR82540
GeneID:7840245 KEGG:tet:TTHERM_01109940 Uniprot:Q22B61
Length = 946
Score = 163 (62.4 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 83/324 (25%), Positives = 137/324 (42%)
Query: 814 DFKIESSTILDLEETHKAENFKLSL----CPHAHLGAQAEGTSIISGTKWRNGHPQTTNN 869
++K E S++ ++E + + K SL H Q E + K +N +
Sbjct: 643 EYKSEDSSLYKMKEEKQTKQLKQSLNQEELVQKHFQIQEEARIL---NKKQNNELMEIDE 699
Query: 870 NISCD------IHN--QDNILDISSGLLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIP 921
I D I + +D I +++ L + D K + +++ Q +K FI
Sbjct: 700 KIDQDQGRAFKIKSKKEDEIEELADDLEEQLKTWESED-FKKDKFVELQIIGQFNKAFII 758
Query: 922 V--VAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNF 979
V + +IDQHA+DE+ E L K + +G+ + E L + E +L+N
Sbjct: 759 AYWVEKDQIFLIDQHASDEKTNYERLL-KENNFQGQKLVK-PIELSLTIQEA--DILENN 814
Query: 980 AEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQL 1039
E K G+ I S N NL Q+ + N++D D E Q +
Sbjct: 815 REIFKKNGFQFQIKYDES---NGEPNLYINQLPSSKHIQF------NINDFD--EIFQNI 863
Query: 1040 --ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1097
+TD + P + R+L SKACR +IM G +L S I+ L + + C HGRP
Sbjct: 864 NNEETDIETFRPKKIQRILASKACRSSIMIGTALNKSSMKQILLNLSKLQSPWNCPHGRP 923
Query: 1098 TTVPLVNLEALHKQIAQLNNSSEL 1121
T V + L +Q+ Q+ + +L
Sbjct: 924 TMVKTPPMNHLIQQV-QVKKTYDL 946
Score = 58 (25.5 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 21/88 (23%), Positives = 41/88 (46%)
Query: 640 DTEENYKFDY-DSKLRRSNQEKCTTARSGLRFEYYDNSSEDFCKYLQEHDPCNKFSREHS 698
D E+N F Y + KL+ Q K + + +++ + S + F K QE+ + +++ +
Sbjct: 561 DEEQNQDFSYFNDKLKLYKQSK-QQSENNSKYQVKEYSFDMFKKSKQENSSKGQDNQKIN 619
Query: 699 DVPFDKTDWLCSVLSSIEYDNPETQRYK 726
+ + D C S Y N + + YK
Sbjct: 620 NEDEENCDDQCCTQSQ-NYSNSQNE-YK 645
Score = 49 (22.3 bits), Expect = 5.4e-07, Sum P(3) = 5.4e-07
Identities = 26/127 (20%), Positives = 59/127 (46%)
Query: 577 LSDSIEPVGNSVSDYKALNSVWCSKISDPFP-QGASWNDGHF-IYNNALEGHSILGEGTS 634
++D IE + N S+ KA S + S+ F + ++N +F I + + + T
Sbjct: 463 VNDEIEDLSNFSSNSKA-QSKQKNDNSEYFKSRNQTFNSDYFSIAQQRKKAYEEQLQNTR 521
Query: 635 CGQLADTEENYKFDYDSKLRRSNQEKCTTARSGLR--FEYYDNSSEDFCKYLQEHDPCNK 692
+L +++E Y+ +Y K + S+++ ++ + + ++DF Y + K
Sbjct: 522 -EELQNSKEEYQENYQKKQQTSSKDHNNQNKTDSKQLINEDEEQNQDF-SYFNDKLKLYK 579
Query: 693 FSREHSD 699
S++ S+
Sbjct: 580 QSKQQSE 586
Score = 41 (19.5 bits), Expect = 6.8e-08, Sum P(3) = 6.8e-08
Identities = 15/65 (23%), Positives = 26/65 (40%)
Query: 14 IHKLLNHLAASFDCSDSWKANNGFLKG--KRSKSQACPAYLLNLRCPHSLYDLTFDPLKT 71
I K +++L + + +K N K+ S A Y+L+L+ D P K
Sbjct: 260 IQKNMSYLFVNTRPVNPFKKMNSIFSDIYKKYNSSARYIYILHLKVKKDAIDFNVSPDKR 319
Query: 72 HVVFK 76
+ K
Sbjct: 320 DIFIK 324
>TAIR|locus:2133274 [details] [associations]
symbol:PMS1 "POSTMEIOTIC SEGREGATION 1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006200 "ATP catabolic
process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0048316 "seed
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007140 "male meiosis"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0010431
"seed maturation" evidence=RCA] [GO:0010564 "regulation of cell
cycle process" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0031047 "gene
silencing by RNA" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP002687 GO:GO:0009555 GO:GO:0016887 GO:GO:0048316
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
HSSP:P54278 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
ProtClustDB:CLSN2689293 EMBL:AY047228 IPI:IPI00544288
RefSeq:NP_567236.1 UniGene:At.26416 ProteinModelPortal:Q941I6
SMR:Q941I6 STRING:Q941I6 PRIDE:Q941I6 EnsemblPlants:AT4G02460.1
GeneID:827997 KEGG:ath:AT4G02460 TAIR:At4g02460 InParanoid:Q941I6
PhylomeDB:Q941I6 Genevestigator:Q941I6 Uniprot:Q941I6
Length = 923
Score = 158 (60.7 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 59/203 (29%), Positives = 90/203 (44%)
Query: 910 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 969
+VL Q + FI L ++DQHAADE+ E L + + + L+ E + P
Sbjct: 706 QVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLE---LSP 762
Query: 970 EIGYQLLQNFAEQIKDWGWIC--NIHTQGSRSFNKNLNLLQRQIT--VITLLAVPCIFGV 1025
E +L + + I++ G++ N + F + IT V L + G
Sbjct: 763 EEEVTVLMHM-DIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFGVEDLKDLISTLGD 821
Query: 1026 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1085
N + + + + TD S P V +L S+ACR ++M GD L +E IVE L
Sbjct: 822 NHGECSVASSYKT-SKTD--SICPSRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLAD 878
Query: 1086 TSLCFQCAHGRPTTVPLVNLEAL 1108
+ C HGRPT LV+L L
Sbjct: 879 LESPWNCPHGRPTMRHLVDLTTL 901
Score = 55 (24.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 41 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 100
K + S+ P +L+ P DL P K V F D V+ + + + A
Sbjct: 296 KDTSSRKYPVTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSNA-- 353
Query: 101 SFDVDMLED-AELP 113
S+ V+ E+ +E P
Sbjct: 354 SYIVNRFEENSEQP 367
Score = 44 (20.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 10/38 (26%), Positives = 16/38 (42%)
Query: 796 GVCNANVKPSSEEEDFRPDFKIESSTILDLEETHKAEN 833
G C+ NV P + F + + S L E + + N
Sbjct: 315 GACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSN 352
>DICTYBASE|DDB_G0283981 [details] [associations]
symbol:pms1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;ISS;IBA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0016887 "ATPase
activity" evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032300
"mismatch repair complex" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283981 Prosite:PS00058 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 EMBL:AAFI02000058 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 RefSeq:XP_638844.1
ProteinModelPortal:Q54QA0 STRING:Q54QA0 EnsemblProtists:DDB0232417
GeneID:8624368 KEGG:ddi:DDB_G0283981 KO:K10858 OMA:TINECED
ProtClustDB:CLSZ2846737 Uniprot:Q54QA0
Length = 1022
Score = 149 (57.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 63/221 (28%), Positives = 94/221 (42%)
Query: 892 TGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 951
T E + K + V+ Q + FI G L +IDQHAADE+ E +LS
Sbjct: 797 TAEEELTKFFKKEYFKQMIVIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFE-----ILS 851
Query: 952 GEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI 1011
KSV Q L+ P+ L + + ++ I N+ F ++
Sbjct: 852 ---KSVESSINSQPLLKPDT----LSDLTSE-EELIIIENVDLFKKNGFKFIIDHDAPTR 903
Query: 1012 TVITLLAVPCIFGVNLSDVDLLEFLQQLADTD--GSSTTPPSVLRVLNSKACRGAIMFGD 1069
I L A P I G + D+ E++ + ++ GS P + +L SKACR +IM G
Sbjct: 904 FKIKLSAFPIIHGQSFGIKDIYEWIFMIKESSIPGSVNKIPRLNSLLASKACRKSIMVGT 963
Query: 1070 SLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHK 1110
+L E ++ L + C HGRPT LV+L K
Sbjct: 964 TLTHKEMKDVLNNLSTLDNPWCCPHGRPTMRHLVDLSIKDK 1004
Score = 64 (27.6 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 15/64 (23%), Positives = 29/64 (45%)
Query: 44 KSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFD 103
K + P + N+ P + YD+ P K + + + +L I +++ W + A FD
Sbjct: 324 KRGSYPVVIFNIEMPTNNYDVNVTPDKRTIFIQKEQQLLLLITDGLKTMW--ETAQSVFD 381
Query: 104 VDML 107
+ L
Sbjct: 382 TNQL 385
>UNIPROTKB|Q69L72 [details] [associations]
symbol:OSJNBa0016G10.12 "Os02g0592300 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0009555
GO:GO:0016887 GO:GO:0048316 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008208 EMBL:CM000139
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
EMBL:AP005874 RefSeq:NP_001047292.1 UniGene:Os.23276 STRING:Q69L72
EnsemblPlants:LOC_Os02g37920.1 GeneID:4329835 KEGG:osa:4329835
ProtClustDB:CLSN2689293 Uniprot:Q69L72
Length = 923
Score = 147 (56.8 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 103/447 (23%), Positives = 174/447 (38%)
Query: 678 EDFCKYLQE-----HDPCNKFSREHSDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNC 732
ED C + E C + R +D+ + L S +S+I N R+H+
Sbjct: 492 EDSCNLISEAPVLRRGTCLEQVRR-TDLGVNSPTALTSRVSNIPEVNAPQGTNPLRHHSL 550
Query: 733 EPNPIHKELSRRSHSAPP-FHRHKRRYISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHL 791
+ HS PP H+ L C V A +S H +S + GA
Sbjct: 551 QSFVPEMPEDSPQHSEPPNIVSHRDEVPQLRPCDVHATESEVDNQHDPCHS-KFGAPSR- 608
Query: 792 QQSSGVCNANVKPSSEEEDFR-PDFKIESSTILDLEETHKAENFKLSLCPHAHLGAQAEG 850
C+ V+P ++ + PD + D ++ + A L +
Sbjct: 609 ------CS-EVEPQNKLTNISLPDAHYDGH---DTAAHSGQSSYPVMQFTLADLRRRRRH 658
Query: 851 TSIISGTKWRNGHPQTTNN---NISCDIHNQDNILDISSGLLHLTGEFFIPDSINKSCLE 907
+ +IS K + P+ + + D + DN S+ L T E + +K
Sbjct: 659 SFMISHAK-KGSFPEKSTRCYKAATLDNYVPDNEEGKSNSLAAATSE--LDKLFSKDDFG 715
Query: 908 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL----DAE 963
+ +V+ Q + FI L ++DQHAADE+ E L + L E
Sbjct: 716 EMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFENLSQSTTLNIQPLLQPLRLDLSPE 775
Query: 964 QELVLPEIGYQLLQNFAEQIKDW-GWICNIHTQGSRSFNKNLNLLQRQIT-VITLLAVPC 1021
+E+++ + +N +D CN + + F+KN+ + + +I++LA
Sbjct: 776 EEVIVSMNMSTIRKNGFVLAEDLHASPCNRYFIKAVPFSKNITFGAQDVKELISMLAD-- 833
Query: 1022 IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1081
+ D ++ + L TD S P V +L S+ACR + M GD L +E I++
Sbjct: 834 ----SQGDCSIISSYK-LDRTD--SICPSRVRAMLASRACRMSTMIGDPLTKTEMKKILK 886
Query: 1082 ELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
L + C HGRPT L +L A+
Sbjct: 887 NLTGLRSPWNCPHGRPTMRHLADLHAI 913
Score = 63 (27.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 41 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 100
+ S ++ P +LN P + YD+ P K + F +L + I + + +
Sbjct: 288 RSSNAKQYPVAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQC-- 345
Query: 101 SFDVDMLED 109
SF ++ +ED
Sbjct: 346 SFSINSVED 354
>UNIPROTKB|F1NQJ2 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IEA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:AADN02023908 EMBL:AADN02023909
IPI:IPI00819916 Ensembl:ENSGALT00000005429 ArrayExpress:F1NQJ2
Uniprot:F1NQJ2
Length = 878
Score = 156 (60.0 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 54/208 (25%), Positives = 92/208 (44%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 960
I+K +++ Q + FI L +IDQHA DE+ E L+ + +G+ L
Sbjct: 684 ISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEMLQQHTVL-QGQK---L 739
Query: 961 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1020
A Q L L + +L E + G+ I N+N + QR + L+++P
Sbjct: 740 IAPQNLNLTAVNETVLIENLEIFRKNGFDFVI--------NENAPVTQR----VKLISLP 787
Query: 1021 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1080
D+ E + L+D G P V ++ S+ACR ++M G +L E +V
Sbjct: 788 TSKNWTFGPQDIDELIFMLSDCPGVMCRPSRVRQMFASRACRKSVMIGTALNVQEMKKLV 847
Query: 1081 EELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
+ + + C HGRPT + +L+ +
Sbjct: 848 THMGEIEHPWNCPHGRPTMRHIASLDLI 875
Score = 53 (23.7 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 690 CNKFSREHSDVPFDKTDWLCSVLSSIEYD--NPETQR-YKFRNHN-CEPNPIHKELSRRS 745
C ++ + +D+P +K + +S ++ T R + F N C+P + K ++
Sbjct: 267 CEEYGLKSTDLP-EKLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVY 325
Query: 746 HSAPPFHRHKRRYISLNCC 764
H +++H+ +I LN C
Sbjct: 326 HL---YNKHQYPFIVLNIC 341
Score = 38 (18.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 89
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 334 PFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSL 374
>ZFIN|ZDB-GENE-030131-686 [details] [associations]
symbol:pms2 "PMS2 postmeiotic segregation increased
2 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058
ZFIN:ZDB-GENE-030131-686 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GeneTree:ENSGT00530000063289 EMBL:CR932017 IPI:IPI00901265
Ensembl:ENSDART00000111565 Bgee:E7F558 Uniprot:E7F558
Length = 851
Score = 171 (65.3 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 57/217 (26%), Positives = 99/217 (45%)
Query: 892 TGEFFIPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 951
T E + I+K ++ +++ Q + FI L +IDQHA DE+ E L+ +
Sbjct: 648 TAEDELKKEISKDMFKEMEIIGQFNLGFIITKIKSDLFIIDQHATDEKYNFEMLQQNTVL 707
Query: 952 GEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI 1011
+G+ L Q L LP I +L E + G+ I +++ ++ R
Sbjct: 708 -KGQR---LIVPQSLHLPAISETVLMENLEIFRKNGFDFLI--------DEDAQVMDR-- 753
Query: 1012 TVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSL 1071
+ L+++P D+ E + L+D+ G P V ++ S+ACR ++M G +L
Sbjct: 754 --VKLVSLPTSKNWTFGPNDIEELIFMLSDSPGIMCRPSRVRQMFASRACRKSVMVGTAL 811
Query: 1072 LPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
SE +V + + + C HGRPT L NL+ +
Sbjct: 812 NTSEMKKLVLHMGEIEQPWNCPHGRPTMRHLANLDMI 848
Score = 39 (18.8 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 319 SKEGDHLFREECERITFGEFEKHTPELKEENSK 351
S E + +R +I GE + ELK+E SK
Sbjct: 627 SNEQEPKYRRFRAKINPGENQTAEDELKKEISK 659
Score = 37 (18.1 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 8/41 (19%), Positives = 20/41 (48%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 89
P LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 316 PFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSL 356
>TIGR_CMR|SPO_3362 [details] [associations]
symbol:SPO_3362 "DNA mismatch repair protein MutL"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:YP_168558.1 ProteinModelPortal:Q5LN50 GeneID:3194545
KEGG:sil:SPO3362 PATRIC:23380177 Uniprot:Q5LN50
Length = 621
Score = 114 (45.2 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 28/89 (31%), Positives = 43/89 (48%)
Query: 1014 ITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLP 1073
+ + P I G + L + L +LAD S+T + +L+ AC G+I G +
Sbjct: 521 VAVRETPAILGPVDAGAMLRDILDELADQGESATLQARIEAILSRVACHGSIRSGRRMRG 580
Query: 1074 SECALIVEELKQTSLCFQCAHGRPTTVPL 1102
E ++ E++ T QC HGRPT V L
Sbjct: 581 EEMNALLREMEATPHSGQCNHGRPTYVEL 609
Score = 69 (29.3 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI 971
QV + +I + ++DQHAA ER+ E+L+ + ++ G A Q L++PEI
Sbjct: 438 QVHENYIIAQTADGMVIVDQHAAHERLVYEKLKRQ-MAETGV------AAQALLIPEI 488
Score = 56 (24.8 bits), Expect = 4.7e-06, Sum P(3) = 4.7e-06
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSA 92
PA L + C +L D+ P K+ V F+D I A+R A
Sbjct: 301 PAAALFIDCDPTLVDVNVHPAKSEVRFRDPGVARGLIVSALRHA 344
>RGD|1305483 [details] [associations]
symbol:Pms2 "PMS2 postmeiotic segregation increased 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IBA] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032138 "single base insertion or
deletion binding" evidence=IEA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0042493 "response to drug" evidence=IEP] InterPro:IPR002099
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 RGD:1305483 GO:GO:0005524 GO:GO:0042493 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CH474012 GO:GO:0007131
GO:GO:0032407 GO:GO:0016446 GO:GO:0032389 PANTHER:PTHR10073
GO:GO:0032138 GO:GO:0016447 KO:K10858 GeneTree:ENSGT00530000063289
CTD:5395 IPI:IPI00949952 RefSeq:NP_001099378.1 UniGene:Rn.102072
Ensembl:ENSRNOT00000067021 GeneID:288479 KEGG:rno:288479
NextBio:628138 Uniprot:D4A360
Length = 542
Score = 154 (59.3 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 56/210 (26%), Positives = 95/210 (45%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 960
I KS + ++L Q + FI L ++DQHAADE+ E L+ + L
Sbjct: 348 IRKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTV---------L 398
Query: 961 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF--NKNLNLLQRQITVITLLA 1018
A Q L+ P+ N A I++ I + F +++ + +R + +
Sbjct: 399 QA-QRLITPQTLNLTAVNEAVLIEN----LEIFRKNGFDFIIDEDAPVTERAKLISLPTS 453
Query: 1019 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1078
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE
Sbjct: 454 KNWTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSASEMKK 509
Query: 1079 IVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
++ + + + C HGRPT + NL+ +
Sbjct: 510 LISHMGEMDHPWNCPHGRPTMRHIANLDVI 539
Score = 41 (19.5 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 10/48 (20%), Positives = 22/48 (45%)
Query: 415 GDLLNSQRGYEYLQIEPGVSNGASGTASPLDKDEFSNEFEVSKDIKKP 462
GD ++ ++G + + + G ++P FS++ VS +P
Sbjct: 167 GDCMDREKGEKDSGLSSTSAGSEEGFSTPEVASSFSSDCNVSSPEDRP 214
Score = 40 (19.1 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 33/163 (20%), Positives = 54/163 (33%)
Query: 698 SDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPN--PIHKELSRRSHSAPPFHRHK 755
S+ F + S S +PE R N NC + LS H P
Sbjct: 188 SEEGFSTPEVASSFSSDCNVSSPE-DRPSQENTNCGEQFLEVDDHLSGTGHHLKPEDNGY 246
Query: 756 RRYISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDFRPDF 815
+ SL SNA G + Q++ +V ++ DF
Sbjct: 247 KCRASLP--PTRLSPSNAKRFRTEDRPSNVG----VPQNTSAAEVDVAVKINKKIVLLDF 300
Query: 816 KIES-----STILDLEETHKAEN----FKLSLCPHAHLGAQAE 849
+ S + L++ K+E+ F+ +CP + A+ E
Sbjct: 301 SLSSLAKQMKQLQHLKQQSKSEHNYRKFRAKICPGENQAAEDE 343
Score = 38 (18.4 bits), Expect = 6.1e-06, Sum P(3) = 6.1e-06
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 89
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 8 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 48
Score = 37 (18.1 bits), Expect = 7.7e-06, Sum P(3) = 7.7e-06
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 37 FLKGKRSKSQACPAYLLNLR 56
F KR S +CP+ +++ R
Sbjct: 131 FPSQKRGVSSSCPSDIISYR 150
>UNIPROTKB|F1NQJ3 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
EMBL:AADN02023908 EMBL:AADN02023909 IPI:IPI00604396
Ensembl:ENSGALT00000005427 ArrayExpress:F1NQJ3 Uniprot:F1NQJ3
Length = 858
Score = 142 (55.0 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 49/181 (27%), Positives = 82/181 (45%)
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 987
L +IDQHA DE+ E L+ + +G+ L A Q L L + +L E + G
Sbjct: 693 LFIIDQHATDEKYNFEMLQQHTVL-QGQK---LIAPQNLNLTAVNETVLIENLEIFRKNG 748
Query: 988 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1047
+ I N+N + QR + L+++P D+ E + L+D G
Sbjct: 749 FDFVI--------NENAPVTQR----VKLISLPTSKNWTFGPQDIDELIFMLSDCPGVMC 796
Query: 1048 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEA 1107
P V ++ S+ACR ++M G +L E +V + + + C HGRPT + +L+
Sbjct: 797 RPSRVRQMFASRACRKSVMIGTALNVQEMKKLVTHMGEIEHPWNCPHGRPTMRHIASLDL 856
Query: 1108 L 1108
+
Sbjct: 857 I 857
Score = 53 (23.7 bits), Expect = 7.8e-06, Sum P(2) = 7.8e-06
Identities = 18/79 (22%), Positives = 38/79 (48%)
Query: 690 CNKFSREHSDVPFDKTDWLCSVLSSIEYD--NPETQR-YKFRNHN-CEPNPIHKELSRRS 745
C ++ + +D+P +K + +S ++ T R + F N C+P + K ++
Sbjct: 244 CEEYGLKSTDLP-EKLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVY 302
Query: 746 HSAPPFHRHKRRYISLNCC 764
H +++H+ +I LN C
Sbjct: 303 HL---YNKHQYPFIVLNIC 318
Score = 46 (21.3 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 211 QDHQPSRHLFSPPLENLKKEGDHLFRKECERITFGDAEKDPAELQEENTEME 262
Q+++ R SP EN E D L RKE + F E P + + N+++E
Sbjct: 643 QNYRRFRAKISPG-ENKVAE-DEL-RKEISKEMFAKMEHWPVQFRVYNSQVE 691
Score = 38 (18.4 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 89
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 311 PFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSL 351
>UNIPROTKB|C9J167 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 HOGENOM:HOG000165474 HGNC:HGNC:9122
IPI:IPI00604708 ProteinModelPortal:C9J167 SMR:C9J167 STRING:C9J167
Ensembl:ENST00000441476 UCSC:uc003spj.3 ArrayExpress:C9J167
Bgee:C9J167 Uniprot:C9J167
Length = 756
Score = 150 (57.9 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 960
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ + +G+ L
Sbjct: 562 ISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVL-QGQR---L 617
Query: 961 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1020
A Q L L + +L E + G+ I ++N + +R + +
Sbjct: 618 IAPQTLNLTAVNEAVLIENLEIFRKNGFDFVI--------DENAPVTERAKLISLPTSKN 669
Query: 1021 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1080
FG DVD L F+ L+D+ G P V ++ S+ACR ++M G +L SE ++
Sbjct: 670 WTFGPQ--DVDELIFM--LSDSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLI 725
Query: 1081 EELKQTSLCFQCAHGRPTTVPLVNL 1105
+ + + C HGRPT + NL
Sbjct: 726 THMGEMDHPWNCPHGRPTMRHIANL 750
Score = 41 (19.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLE 108
P +LN+ D+ P K ++ ++ + +LA ++ ++ + DS DV+ L
Sbjct: 213 PFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF------DS-DVNKLN 265
Query: 109 DAELPL 114
++ PL
Sbjct: 266 VSQQPL 271
>UNIPROTKB|I3L0B5 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 HGNC:HGNC:9122
ProteinModelPortal:I3L0B5 SMR:I3L0B5 Ensembl:ENST00000382322
Bgee:I3L0B5 Uniprot:I3L0B5
Length = 815
Score = 150 (57.9 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 960
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ + +G+ L
Sbjct: 621 ISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVL-QGQR---L 676
Query: 961 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1020
A Q L L + +L E + G+ I ++N + +R + +
Sbjct: 677 IAPQTLNLTAVNEAVLIENLEIFRKNGFDFVI--------DENAPVTERAKLISLPTSKN 728
Query: 1021 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1080
FG DVD L F+ L+D+ G P V ++ S+ACR ++M G +L SE ++
Sbjct: 729 WTFGPQ--DVDELIFM--LSDSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLI 784
Query: 1081 EELKQTSLCFQCAHGRPTTVPLVNL 1105
+ + + C HGRPT + NL
Sbjct: 785 THMGEMDHPWNCPHGRPTMRHIANL 809
Score = 41 (19.5 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLE 108
P +LN+ D+ P K ++ ++ + +LA ++ ++ + DS DV+ L
Sbjct: 272 PFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF------DS-DVNKLN 324
Query: 109 DAELPL 114
++ PL
Sbjct: 325 VSQQPL 330
>UNIPROTKB|P54278 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006298 "mismatch repair" evidence=IDA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0042493 GO:GO:0016887 GO:GO:0006298 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 EMBL:AC005995
MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 Orphanet:144 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
HOGENOM:HOG000165474 OMA:LDKPWNC HPA:CAB010235 EMBL:U13696
EMBL:AB103082 EMBL:AB103083 EMBL:AB103085 EMBL:U14658 EMBL:AK312390
EMBL:BC093921 IPI:IPI00418329 IPI:IPI00746337 IPI:IPI00873034
IPI:IPI00874088 PIR:S47598 RefSeq:NP_000526.1 UniGene:Hs.632637
PDB:1EA6 PDB:1H7S PDB:1H7U PDBsum:1EA6 PDBsum:1H7S PDBsum:1H7U
ProteinModelPortal:P54278 SMR:P54278 DIP:DIP-27602N IntAct:P54278
MINT:MINT-2804140 STRING:P54278 PhosphoSite:P54278 DMDM:1709685
SWISS-2DPAGE:P54278 PRIDE:P54278 Ensembl:ENST00000265849
Ensembl:ENST00000382321 Ensembl:ENST00000406569 GeneID:5395
KEGG:hsa:5395 UCSC:uc003spk.3 UCSC:uc010kte.3 UCSC:uc010ktf.2
CTD:5395 GeneCards:GC07M005979 HGNC:HGNC:9122 MIM:600259 MIM:614337
neXtProt:NX_P54278 PharmGKB:PA33448 HOVERGEN:HBG008219
InParanoid:P54278 PhylomeDB:P54278 EvolutionaryTrace:P54278
GenomeRNAi:5395 NextBio:20918 ArrayExpress:P54278 Bgee:P54278
CleanEx:HS_PMS2 Genevestigator:P54278 GermOnline:ENSG00000122512
Uniprot:P54278
Length = 862
Score = 150 (57.9 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 54/205 (26%), Positives = 94/205 (45%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 960
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ + +G+ L
Sbjct: 668 ISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVL-QGQR---L 723
Query: 961 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1020
A Q L L + +L E + G+ I ++N + +R + +
Sbjct: 724 IAPQTLNLTAVNEAVLIENLEIFRKNGFDFVI--------DENAPVTERAKLISLPTSKN 775
Query: 1021 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1080
FG DVD L F+ L+D+ G P V ++ S+ACR ++M G +L SE ++
Sbjct: 776 WTFGPQ--DVDELIFM--LSDSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLI 831
Query: 1081 EELKQTSLCFQCAHGRPTTVPLVNL 1105
+ + + C HGRPT + NL
Sbjct: 832 THMGEMDHPWNCPHGRPTMRHIANL 856
Score = 41 (19.5 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHDSFDVDMLE 108
P +LN+ D+ P K ++ ++ + +LA ++ ++ + DS DV+ L
Sbjct: 319 PFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF------DS-DVNKLN 371
Query: 109 DAELPL 114
++ PL
Sbjct: 372 VSQQPL 377
>MGI|MGI:104288 [details] [associations]
symbol:Pms2 "postmeiotic segregation increased 2 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=ISO;IGI;IMP;TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IGI;IMP] [GO:0007126 "meiosis"
evidence=TAS] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IMP] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0032138
"single base insertion or deletion binding" evidence=ISO]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 MGI:MGI:104288 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GermOnline:ENSMUSG00000029613 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0016447 HOGENOM:HOG000165474 HOVERGEN:HBG008219 EMBL:U28724
IPI:IPI00133511 UniGene:Mm.2950 ProteinModelPortal:P54279
SMR:P54279 STRING:P54279 PhosphoSite:P54279 PRIDE:P54279
ChiTaRS:Pms2 Genevestigator:P54279 Uniprot:P54279
Length = 859
Score = 152 (58.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 56/210 (26%), Positives = 96/210 (45%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 960
I+KS + ++L Q + FI L ++DQHAADE+ E L+ + L
Sbjct: 665 ISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTV---------L 715
Query: 961 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF--NKNLNLLQRQITVITLLA 1018
A Q L+ P+ N A I++ I + F +++ + +R + +
Sbjct: 716 QA-QRLITPQTLNLTAVNEAVLIEN----LEIFRKNGFDFVIDEDAPVTERAKLISLPTS 770
Query: 1019 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1078
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE
Sbjct: 771 KNWTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNASEMKK 826
Query: 1079 IVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
++ + + + C HGRPT + NL+ +
Sbjct: 827 LITHMGEMDHPWNCPHGRPTMRHVANLDVI 856
Score = 38 (18.4 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 89
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 319 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 359
>WB|WBGene00004064 [details] [associations]
symbol:pms-2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0009792 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272
PIR:B89219 PIR:T21953 PIR:T21957 RefSeq:NP_505933.1
ProteinModelPortal:G5EFG5 SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5
EnsemblMetazoa:H12C20.2a GeneID:179587 KEGG:cel:CELE_H12C20.2
CTD:179587 WormBase:H12C20.2a NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 114 (45.2 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 1016 LLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSE 1075
L A P + L++ DL E L ++ P + ++ SKACR ++M G L E
Sbjct: 709 LTARPELLNQQLTNSDLEEILAVVSQYPNQMYRPVRIRKIFASKACRKSVMIGKPLNQRE 768
Query: 1076 CALIVEELKQTSLCFQCAHGRPTTVPLVNL 1105
I+ L + + C HGRPT L +L
Sbjct: 769 MTQIIRHLAKLDQPWNCPHGRPTIRHLASL 798
Score = 74 (31.1 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 900 SINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELR 946
S+ K K++ Q + FI G L ++DQHA+DE+ E L+
Sbjct: 610 SLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQ 656
Score = 47 (21.6 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 17/93 (18%), Positives = 33/93 (35%)
Query: 41 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 100
K+ + P +L + P D+ P K V+ + +LA + ++ ++K +
Sbjct: 310 KQFNKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYLKIVGSH 369
Query: 101 SFDVDMLEDAELP-LESSRFXXXXXXXXXXXXP 132
S +ED + L F P
Sbjct: 370 STVRSSVEDRRIMNLSQQSFSNASFMSSKSSTP 402
>UNIPROTKB|G5EFG5 [details] [associations]
symbol:pms-2 "Protein PMS-2, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0009792 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272 PIR:B89219
PIR:T21953 PIR:T21957 RefSeq:NP_505933.1 ProteinModelPortal:G5EFG5
SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5 EnsemblMetazoa:H12C20.2a
GeneID:179587 KEGG:cel:CELE_H12C20.2 CTD:179587 WormBase:H12C20.2a
NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 114 (45.2 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 28/90 (31%), Positives = 42/90 (46%)
Query: 1016 LLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSE 1075
L A P + L++ DL E L ++ P + ++ SKACR ++M G L E
Sbjct: 709 LTARPELLNQQLTNSDLEEILAVVSQYPNQMYRPVRIRKIFASKACRKSVMIGKPLNQRE 768
Query: 1076 CALIVEELKQTSLCFQCAHGRPTTVPLVNL 1105
I+ L + + C HGRPT L +L
Sbjct: 769 MTQIIRHLAKLDQPWNCPHGRPTIRHLASL 798
Score = 74 (31.1 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 900 SINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELR 946
S+ K K++ Q + FI G L ++DQHA+DE+ E L+
Sbjct: 610 SLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQ 656
Score = 47 (21.6 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 17/93 (18%), Positives = 33/93 (35%)
Query: 41 KRSKSQACPAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKKIAHD 100
K+ + P +L + P D+ P K V+ + +LA + ++ ++K +
Sbjct: 310 KQFNKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYLKIVGSH 369
Query: 101 SFDVDMLEDAELP-LESSRFXXXXXXXXXXXXP 132
S +ED + L F P
Sbjct: 370 STVRSSVEDRRIMNLSQQSFSNASFMSSKSSTP 402
>UNIPROTKB|D3ZZF0 [details] [associations]
symbol:Pms2 "Protein Pms2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 RGD:1305483 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
IPI:IPI00949446 ProteinModelPortal:D3ZZF0
Ensembl:ENSRNOT00000068106 ArrayExpress:D3ZZF0 Uniprot:D3ZZF0
Length = 850
Score = 154 (59.3 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 56/210 (26%), Positives = 95/210 (45%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 960
I KS + ++L Q + FI L ++DQHAADE+ E L+ + L
Sbjct: 656 IRKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTV---------L 706
Query: 961 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF--NKNLNLLQRQITVITLLA 1018
A Q L+ P+ N A I++ I + F +++ + +R + +
Sbjct: 707 QA-QRLITPQTLNLTAVNEAVLIEN----LEIFRKNGFDFIIDEDAPVTERAKLISLPTS 761
Query: 1019 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1078
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE
Sbjct: 762 KNWTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALSASEMKK 817
Query: 1079 IVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
++ + + + C HGRPT + NL+ +
Sbjct: 818 LISHMGEMDHPWNCPHGRPTMRHIANLDVI 847
Score = 42 (19.8 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 33/161 (20%), Positives = 54/161 (33%)
Query: 698 SDVPFDKTDWLCSVLSSIEYDNPETQRYKFRNHNCEPNPIHKELSRRSHSAPPFHRHKRR 757
S+ F + S S +PE R N NC + LS H P +
Sbjct: 500 SEEGFSTPEVASSFSSDCNVSSPE-DRPSQENTNC--GELDDHLSGTGHHLKPEDNGYKC 556
Query: 758 YISLNCCSVEAGKSNAHTLHCAKNSPEAGAFKHLQQSSGVCNANVKPSSEEEDFRPDFKI 817
SL SNA G + Q++ +V ++ DF +
Sbjct: 557 RASLP--PTRLSPSNAKRFRTEDRPSNVG----VPQNTSAAEVDVAVKINKKIVLLDFSL 610
Query: 818 ES-----STILDLEETHKAEN----FKLSLCPHAHLGAQAE 849
S + L++ K+E+ F+ +CP + A+ E
Sbjct: 611 SSLAKQMKQLQHLKQQSKSEHNYRKFRAKICPGENQAAEDE 651
Score = 41 (19.5 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 10/48 (20%), Positives = 22/48 (45%)
Query: 415 GDLLNSQRGYEYLQIEPGVSNGASGTASPLDKDEFSNEFEVSKDIKKP 462
GD ++ ++G + + + G ++P FS++ VS +P
Sbjct: 479 GDCMDREKGEKDSGLSSTSAGSEEGFSTPEVASSFSSDCNVSSPEDRP 526
Score = 38 (18.4 bits), Expect = 3.1e-05, Sum P(3) = 3.1e-05
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 89
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 320 PFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 360
Score = 37 (18.1 bits), Expect = 3.8e-05, Sum P(3) = 3.8e-05
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 37 FLKGKRSKSQACPAYLLNLR 56
F KR S +CP+ +++ R
Sbjct: 443 FPSQKRGVSSSCPSDIISYR 462
>UNIPROTKB|A9WJ86 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:324602 "Chloroflexus aurantiacus J-10-fl" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000909 GenomeReviews:CP000909_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:ATMACHA RefSeq:YP_001634752.1 ProteinModelPortal:A9WJ86
STRING:A9WJ86 GeneID:5825934 KEGG:cau:Caur_1133 PATRIC:21413049
ProtClustDB:CLSK975399 BioCyc:CAUR324602:GIXU-1150-MONOMER
Uniprot:A9WJ86
Length = 624
Score = 105 (42.0 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 30/86 (34%), Positives = 45/86 (52%)
Query: 904 SCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAE 963
S L +V+ QV +I A + +IDQHAA ERI E+L ++ +S L +
Sbjct: 432 SALPPLRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQHAVESQQLLIPQ 491
Query: 964 QELVLPEIGYQLLQNFAEQIKDWGWI 989
V PE LL N AE++ +WG++
Sbjct: 492 AVEVSPEASALLLGN-AERLAEWGFV 516
Score = 74 (31.1 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 27/105 (25%), Positives = 46/105 (43%)
Query: 1012 TVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR--VLNSKACRGAIMFGD 1069
T + + A+P + + E ++LA GS P R +L + AC ++ G
Sbjct: 522 TGVLVRAIPATLPTDELTQAIHEIAEKLAGRGGSD---PLEWREAMLITLACHTSVRAGQ 578
Query: 1070 SLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1114
L E ++ +L+Q C HGRPT + L+ L +Q +
Sbjct: 579 PLSHEEMRQLLRQLEQCVSPRTCPHGRPTMI-LMTPAQLERQFGR 622
Score = 54 (24.1 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMK 95
P +L++R + D+ P K+ V F+ V + + RAIR A ++
Sbjct: 286 PIAILDVRVHPAAIDVNVHPTKSEVKFRYAAHVHSVLGRAIRDALLR 332
Score = 39 (18.8 bits), Expect = 3.1e-05, Sum P(4) = 3.1e-05
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 283 PIVPWKIDRHAWTIESSRFQYHQSSPHLYSSPL 315
P W + AW E SR+ + L ++PL
Sbjct: 363 PSSGWSVGASAWDRERSRWDVGSPATAL-NTPL 394
Score = 39 (18.8 bits), Expect = 0.00063, Sum P(3) = 0.00062
Identities = 9/43 (20%), Positives = 16/43 (37%)
Query: 607 PQGASWNDGHFIYNNALEGHSILGEGTSCGQLADTEENYKFDY 649
P G + + YN + + E T G ++ + Y Y
Sbjct: 139 PVGTTITVRNLFYNTPVRREYLRSEATETGAISAIVQQYALAY 181
>UNIPROTKB|Q8TTB5 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:188937 "Methanosarcina acetivorans C2A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE010299 GenomeReviews:AE010299_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
RefSeq:NP_615486.1 ProteinModelPortal:Q8TTB5 GeneID:1472414
KEGG:mac:MA0522 ProtClustDB:CLSK449998
BioCyc:MACE188937:GI2O-589-MONOMER Uniprot:Q8TTB5
Length = 656
Score = 97 (39.2 bits), Expect = 3.7e-05, Sum P(2) = 3.6e-05
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 902 NKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE-LRHK 948
N LED +++ QV K +I G L +IDQHAA ER+ E+ LR K
Sbjct: 463 NTDLLEDLRIIGQVSKMYILAEKGEDLVIIDQHAAHERVLYEQVLRTK 510
Score = 90 (36.7 bits), Expect = 3.7e-05, Sum P(2) = 3.6e-05
Identities = 29/104 (27%), Positives = 48/104 (46%)
Query: 1013 VITLLAVPCIFGVNLSDVDLL-EFLQQLADTDGSSTTPPSVL-RVLNSKACRGAIMFGDS 1070
V+T VP +FG L D ++ + + L +G + +V + ACR AI G +
Sbjct: 556 VVTF--VPEVFG-RLEDTGVIHDVISDLL-AEGKVKKDTGISEKVSKTLACRAAIKGGAA 611
Query: 1071 LLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQ 1114
+ ++E+LK + C HGRPT + E L + A+
Sbjct: 612 CNTRQMEELIEQLKAAESPYSCPHGRPTVITFTKGE-LDRMFAR 654
>UNIPROTKB|Q7SAM1 [details] [associations]
symbol:NCU08020 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B EMBL:AABX02000051
OMA:SDFAKMK RefSeq:XP_962690.2 UniGene:Ncr.24794
ProteinModelPortal:Q7SAM1 STRING:Q7SAM1
EnsemblFungi:EFNCRT00000008289 GeneID:3878856 KEGG:ncr:NCU08020
Uniprot:Q7SAM1
Length = 894
Score = 151 (58.2 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 55/212 (25%), Positives = 89/212 (41%)
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 987
L +IDQHA+DE+ E L+ + V + L L + +++ + G
Sbjct: 665 LFIIDQHASDEKYNFERLQSTTTVQSQRLVQ----PKPLTLTAVEEEIILEHLPALAANG 720
Query: 988 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1047
+ + T G + LL ++ T FGV +D++ L FL L D SS
Sbjct: 721 FQVRVDTSGESAVGSRCQLLSLPLSRETT------FGV--ADLEELIFL--LGDNPTSSA 770
Query: 1048 T-----PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1102
T P V ++ +ACR +IM G +L + +V + + + C HGRPT L
Sbjct: 771 TTAIPRPSKVRKMFAMRACRSSIMIGRALSRPQMEKVVRHMGEMEKPWNCPHGRPTMRHL 830
Query: 1103 VNL-EALHKQIAQLNNSSELWHGLHRGEISLK 1133
L A + I + + W G+ R + K
Sbjct: 831 CGLGSAFGEGIKEKERGWDEWEGVERERVDWK 862
Score = 37 (18.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 536 SQHLPRLSTAGDIT 549
++HLPR TA T
Sbjct: 577 AKHLPRAGTASSST 590
>UNIPROTKB|F1RFM9 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 CTD:5395 EMBL:FP102636
RefSeq:XP_003124331.1 Ensembl:ENSSSCT00000008330 GeneID:100514342
KEGG:ssc:100514342 Uniprot:F1RFM9
Length = 852
Score = 149 (57.5 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 52/210 (24%), Positives = 96/210 (45%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 960
I+K + +++ Q + FI + ++DQHA DE+ E L+ + +G
Sbjct: 658 ISKEMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVL-QG------ 710
Query: 961 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSF--NKNLNLLQRQITVITLLA 1018
Q L++P+ N A I++ +I + F +++ + +R + +
Sbjct: 711 ---QRLIVPQTLNLTAVNEAVLIEN----LDIFRKNGFDFVIDEDAPVTERAKLISLPTS 763
Query: 1019 VPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1078
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE
Sbjct: 764 KNWTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMRR 819
Query: 1079 IVEELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
+V + + + C HGRPT + NL+ +
Sbjct: 820 LVSHMGEMDHPWNCPHGRPTMRHIANLDVI 849
Score = 43 (20.2 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 320 KEGDHLFREECERITFGEFEKHTPELKEENSK 351
+EG+ +R+ +I GE + EL++E SK
Sbjct: 629 REGEQNYRKFRAKICPGENQAAEDELRKEISK 660
Score = 39 (18.8 bits), Expect = 6.4e-05, Sum P(3) = 6.4e-05
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 89
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 319 PFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 359
>TIGR_CMR|CHY_1396 [details] [associations]
symbol:CHY_1396 "DNA mismatch repair protein HexB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 OMA:IRNGTPM HOGENOM:HOG000256552
RefSeq:YP_360228.1 ProteinModelPortal:Q3ACA6 STRING:Q3ACA6
GeneID:3727331 KEGG:chy:CHY_1396 PATRIC:21275923
BioCyc:CHYD246194:GJCN-1395-MONOMER Uniprot:Q3ACA6
Length = 578
Score = 105 (42.0 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 27/86 (31%), Positives = 48/86 (55%)
Query: 1026 NLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1085
N+++V L E+L ++ + + L++ AC+ A+ FG+ L SE +V+EL +
Sbjct: 495 NIANV-LEEYLYEIMEQKEQVSFREKALKLF---ACKNAVKFGEKLTYSEMTNLVKELFK 550
Query: 1086 TSLCFQCAHGRPTTVPLVNLEALHKQ 1111
T+ C HGRPT L +L ++K+
Sbjct: 551 TNYPLSCPHGRPTIYEL-SLTEINKK 575
Score = 77 (32.2 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 900 SINKSCLEDA--KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKV 949
S+NK ++ +V+ Q K+I V L +IDQHAA ERI E+ + K+
Sbjct: 385 SLNKDFAKELNFQVIGQFSLKYIIVEKNDKLLIIDQHAAHERILYEKYQTKL 436
Score = 43 (20.2 bits), Expect = 9.7e-05, Sum P(3) = 9.7e-05
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRS 91
P L + P + D+ P K V F D + + + IR+
Sbjct: 282 PLVFLEVVVPGTWVDVNVHPQKLEVKFMDEQKIYLDVRTIIRN 324
>ASPGD|ASPL0000093218 [details] [associations]
symbol:AN11853 species:162425 "Emericella nidulans"
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000404 "loop DNA binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 135 (52.6 bits), Expect = 0.00011, P = 0.00011
Identities = 52/202 (25%), Positives = 90/202 (44%)
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 987
L +IDQHA+DE+I E L+ + V + V EI +++N K+ G
Sbjct: 793 LFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEI---VIENQVILEKN-G 848
Query: 988 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1047
++ ++ G + + +LL L+ +F V DL E + L +T +T
Sbjct: 849 FVVDVDDSGDKPIGQRCSLLSLP------LSKEVVFDVR----DLEELIAILTETSTPNT 898
Query: 1048 T--------PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1099
T P V ++ +ACR +IM G +L + +V ++ + C HGRPT
Sbjct: 899 TGPEIDIPRPSKVRKMFAMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPWNCPHGRPTM 958
Query: 1100 VPLVNLEA--LHKQIAQLNNSS 1119
L +L + + A ++N+S
Sbjct: 959 RHLFSLGRWEVWDEYADIHNAS 980
>ASPGD|ASPL0000095187 [details] [associations]
symbol:AN11854 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 135 (52.6 bits), Expect = 0.00011, P = 0.00011
Identities = 52/202 (25%), Positives = 90/202 (44%)
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 987
L +IDQHA+DE+I E L+ + V + V EI +++N K+ G
Sbjct: 793 LFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEI---VIENQVILEKN-G 848
Query: 988 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1047
++ ++ G + + +LL L+ +F V DL E + L +T +T
Sbjct: 849 FVVDVDDSGDKPIGQRCSLLSLP------LSKEVVFDVR----DLEELIAILTETSTPNT 898
Query: 1048 T--------PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1099
T P V ++ +ACR +IM G +L + +V ++ + C HGRPT
Sbjct: 899 TGPEIDIPRPSKVRKMFAMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPWNCPHGRPTM 958
Query: 1100 VPLVNLEA--LHKQIAQLNNSS 1119
L +L + + A ++N+S
Sbjct: 959 RHLFSLGRWEVWDEYADIHNAS 980
>UNIPROTKB|Q5AZG4 [details] [associations]
symbol:AN6316.2 "ATP-binding protein (Eurofung)"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 135 (52.6 bits), Expect = 0.00011, P = 0.00011
Identities = 52/202 (25%), Positives = 90/202 (44%)
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 987
L +IDQHA+DE+I E L+ + V + V EI +++N K+ G
Sbjct: 793 LFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEI---VIENQVILEKN-G 848
Query: 988 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1047
++ ++ G + + +LL L+ +F V DL E + L +T +T
Sbjct: 849 FVVDVDDSGDKPIGQRCSLLSLP------LSKEVVFDVR----DLEELIAILTETSTPNT 898
Query: 1048 T--------PPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1099
T P V ++ +ACR +IM G +L + +V ++ + C HGRPT
Sbjct: 899 TGPEIDIPRPSKVRKMFAMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPWNCPHGRPTM 958
Query: 1100 VPLVNLEA--LHKQIAQLNNSS 1119
L +L + + A ++N+S
Sbjct: 959 RHLFSLGRWEVWDEYADIHNAS 980
>TIGR_CMR|APH_0939 [details] [associations]
symbol:APH_0939 "DNA mismatch repair protein MutL"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000235 GenomeReviews:CP000235_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
RefSeq:YP_505509.1 ProteinModelPortal:Q2GJE2 STRING:Q2GJE2
GeneID:3931281 KEGG:aph:APH_0939 PATRIC:20950598
HOGENOM:HOG000256550 KO:K03572 OMA:IRNGTPM ProtClustDB:CLSK2465330
BioCyc:APHA212042:GHPM-952-MONOMER Uniprot:Q2GJE2
Length = 634
Score = 130 (50.8 bits), Expect = 0.00016, P = 0.00016
Identities = 51/190 (26%), Positives = 85/190 (44%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEG-KSVAYLDAEQELVLPEIG 972
Q+ +++I AG + ++DQHAA ER+ E ++ KV EG K L E + E
Sbjct: 450 QLFERYIISRAGDYVIIVDQHAAHERLVCEYIK-KVTEQEGIKRQVLLMPEFIELGNEYE 508
Query: 973 YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1032
+LL + E+++D G I + G +TV+ + VP IFGV + +
Sbjct: 509 LELLTEYREKLRDLGLI--VEPMGD-------------LTVV-VREVPAIFGVVDAKALI 552
Query: 1033 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1092
+ L+ + + + + AC +I G + E ++ ++ T QC
Sbjct: 553 SKILESIMAKGDELFVKGKLSHICGTVACYSSIRSGRIMKLEEMNSLLRHMESTPHSGQC 612
Query: 1093 AHGRPTTVPL 1102
HGRPT V L
Sbjct: 613 NHGRPTYVKL 622
>UNIPROTKB|A8JCH6 [details] [associations]
symbol:CHLREDRAFT_152712 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR014790 Pfam:PF08676 SMART:SM00853
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
GO:GO:0030983 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389
PANTHER:PTHR10073 EMBL:DS496157 RefSeq:XP_001700136.1
EnsemblPlants:EDO98430 GeneID:5725625 KEGG:cre:CHLREDRAFT_152712
Uniprot:A8JCH6
Length = 329
Score = 128 (50.1 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 34/78 (43%), Positives = 45/78 (57%)
Query: 881 ILDISSGLLHLTG--EFFIPDSINKSCLEDAKV---LQQVDKKFIPVV-AGGTLAVIDQH 934
ILD+ LL L E +P + +S L L+QV+ KFIP V A G+L V+DQH
Sbjct: 85 ILDLERDLLRLQAPHERLVPAEVARSGLATGATGGALRQVEGKFIPTVGADGSLLVVDQH 144
Query: 935 AADERIRLEELRHKVLSG 952
AA ER+RLE+L + G
Sbjct: 145 AAHERVRLEQLTQALTLG 162
Score = 42 (19.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 9/17 (52%), Positives = 12/17 (70%)
Query: 1016 LLAVPCIFGVNLSDVDL 1032
LLAVP + G+ L+ DL
Sbjct: 312 LLAVPVVCGMALTPADL 328
>UNIPROTKB|Q22CH2 [details] [associations]
symbol:TTHERM_01044360 "Putative uncharacterized protein"
species:312017 "Tetrahymena thermophila SB210" [GO:0000795
"synaptonemal complex" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR014790 SMART:SM00853 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 EMBL:GG662530 RefSeq:XP_001030620.1
UniGene:Tth.4756 EnsemblProtists:EAR82957 GeneID:7842187
KEGG:tet:TTHERM_01044360 Uniprot:Q22CH2
Length = 319
Score = 125 (49.1 bits), Expect = 0.00018, P = 0.00018
Identities = 52/241 (21%), Positives = 104/241 (43%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVV--AGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVA 958
++++ ED ++ + K I G L +DQHA ERIR E ++ +
Sbjct: 84 LDRTIFEDIEIFGNCNNKVIICFNQQKGMLFGLDQHAIHERIRYEYFCNQ-FKASAFCLQ 142
Query: 959 YLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGS-------RSFNKNLNLL-QRQ 1010
Y + E+ I +N +Q W T + KN++ L Q +
Sbjct: 143 YKQSRNEIDSKCINLSQ-RNKDKQFPSILWFDQTRTNCLELDAYIFQRLQKNVDKLSQFK 201
Query: 1011 ITVITLLAV----------PCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKA 1060
I V+ + + P ++ +N L+F+ + +++ P ++ ++ SKA
Sbjct: 202 IQVVKIQNINQNKFEVYLWPQLYILNKPITYDLKFIDSILNSE-LGHIPNTIDEIIMSKA 260
Query: 1061 CRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQLNNSSE 1120
C+GAI F + L ++ ++++ +K F C HGR + P +LE + + Q+ + +
Sbjct: 261 CKGAIKFNEELNQNQMDMLIKNIKLCEFPFYCVHGRSSIHPFFSLEI--QDVCQIQKNYQ 318
Query: 1121 L 1121
+
Sbjct: 319 I 319
>UNIPROTKB|F1PNW0 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K10858
GeneTree:ENSGT00530000063289 CTD:5395 EMBL:AAEX03004285
RefSeq:XP_536879.3 Ensembl:ENSCAFT00000024713 GeneID:479751
KEGG:cfa:479751 Uniprot:F1PNW0
Length = 866
Score = 148 (57.2 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 960
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ + +G+ L
Sbjct: 672 ISKTMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVL-QGQR---L 727
Query: 961 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1020
A Q L L + +L E + G+ I +G+ + + I++ T +
Sbjct: 728 IAPQTLNLTAVNEAILIENLEIFRKNGFDFVID-EGAPVTER-----AKLISLPT--SKN 779
Query: 1021 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1080
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE ++
Sbjct: 780 WTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLI 835
Query: 1081 EELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
+ + + C HGRPT + NL+ +
Sbjct: 836 THMGEMDHPWNCPHGRPTMRHIANLDVI 863
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 89
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 319 PFIVLNISVDSECIDINVTPDKRQILLQEEKLLLAVLKTSL 359
Score = 38 (18.4 bits), Expect = 0.00027, Sum P(3) = 0.00027
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 320 KEGDHLFREECERITFGEFEKHTPELKEENSK 351
+EG+ R+ +I GE + EL++E SK
Sbjct: 643 REGEQNCRKFRAKICPGENQAAEDELRKEISK 674
>UNIPROTKB|F1PNU2 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:TINECED
GeneTree:ENSGT00530000063289 EMBL:AAEX03004285
Ensembl:ENSCAFT00000024721 Uniprot:F1PNU2
Length = 897
Score = 148 (57.2 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYL 960
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ + +G+ L
Sbjct: 703 ISKTMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVL-QGQR---L 758
Query: 961 DAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP 1020
A Q L L + +L E + G+ I +G+ + + I++ T +
Sbjct: 759 IAPQTLNLTAVNEAILIENLEIFRKNGFDFVID-EGAPVTER-----AKLISLPT--SKN 810
Query: 1021 CIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1080
FG D+D L F+ L+D+ G P V ++ S+ACR ++M G +L SE ++
Sbjct: 811 WTFGPQ--DIDELIFM--LSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLI 866
Query: 1081 EELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
+ + + C HGRPT + NL+ +
Sbjct: 867 THMGEMDHPWNCPHGRPTMRHIANLDVI 894
Score = 39 (18.8 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 8/41 (19%), Positives = 21/41 (51%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAI 89
P +LN+ D+ P K ++ ++ + +LA ++ ++
Sbjct: 350 PFIVLNISVDSECIDINVTPDKRQILLQEEKLLLAVLKTSL 390
Score = 38 (18.4 bits), Expect = 0.00030, Sum P(3) = 0.00030
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 320 KEGDHLFREECERITFGEFEKHTPELKEENSK 351
+EG+ R+ +I GE + EL++E SK
Sbjct: 674 REGEQNCRKFRAKICPGENQAAEDELRKEISK 705
>UNIPROTKB|A8IT98 [details] [associations]
symbol:CHLREDRAFT_101121 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00853 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:DS496122 RefSeq:XP_001692227.1
EnsemblPlants:EDP04177 GeneID:5717917 KEGG:cre:CHLREDRAFT_101121
ProtClustDB:CLSN2921379 Uniprot:A8IT98
Length = 193
Score = 85 (35.0 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 1050 PSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPT 1098
P V +L S+ACR +IM G L + +++ L + + C HGRPT
Sbjct: 128 PRVRAMLASRACRSSIMVGRPLDRPQMRRVLDRLAELRQPWNCPHGRPT 176
Score = 77 (32.2 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 910 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 969
+VL Q + FI G + ++DQHAADE+ E L+ V +A + L+LP
Sbjct: 2 QVLGQFNLGFILAAHGRDVFIVDQHAADEKTTFERLQRSVALTRQPLLAPMPLPPGLLLP 61
>TIGR_CMR|DET_1195 [details] [associations]
symbol:DET_1195 "DNA mismatch repair protein, MutL/HexB
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552 OMA:FLFINNR
RefSeq:YP_181908.1 ProteinModelPortal:Q3Z791 STRING:Q3Z791
GeneID:3229520 KEGG:det:DET1195 PATRIC:21609425
ProtClustDB:CLSK935583 BioCyc:DETH243164:GJNF-1196-MONOMER
Uniprot:Q3Z791
Length = 566
Score = 75 (31.5 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 23/70 (32%), Positives = 35/70 (50%)
Query: 894 EFFIP--DSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLS 951
++F P S S L +++ Q+ ++ L +IDQHAA ERIR EE+ + S
Sbjct: 367 QYFSPVIQSAKTSVLPLLRLVGQIGGLYLLAEGPDGLYIIDQHAAHERIRYEEIASQTPS 426
Query: 952 GEGKSVAYLD 961
E + LD
Sbjct: 427 -ENARQSLLD 435
Score = 74 (31.1 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 18/61 (29%), Positives = 30/61 (49%)
Query: 1043 DGSSTTPPSVL-RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVP 1101
D P + R+ AC A+ G L +E ++ +L++T++ C HGRPT V
Sbjct: 494 DNPKDAPAEIKERLQRLMACHTAVRAGQVLNEAEMRELLLKLEKTAVPGHCPHGRPTIVK 553
Query: 1102 L 1102
+
Sbjct: 554 I 554
Score = 71 (30.1 bits), Expect = 0.00040, Sum P(3) = 0.00040
Identities = 15/48 (31%), Positives = 25/48 (52%)
Query: 49 PAYLLNLRCPHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIRSAWMKK 96
P ++N+ +L D+ P K V F D V ++RA+RS ++K
Sbjct: 284 PLGVINIWLDGALVDVNIHPTKAEVKFSDESAVFTAVQRAVRSVLVEK 331
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.133 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1145 1117 0.00089 123 3 11 22 0.41 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 49
No. of states in DFA: 635 (67 KB)
Total size of DFA: 580 KB (2259 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 105.82u 0.13s 105.95t Elapsed: 00:00:04
Total cpu time: 105.83u 0.13s 105.96t Elapsed: 00:00:04
Start: Fri May 10 11:14:44 2013 End: Fri May 10 11:14:48 2013