BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001133
(1145 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9UHC1|MLH3_HUMAN DNA mismatch repair protein Mlh3 OS=Homo sapiens GN=MLH3 PE=1 SV=3
Length = 1453
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 130/294 (44%), Gaps = 49/294 (16%)
Query: 882 LDISSG----LLHLTGEFFIPDSINKSCLEDAKVLQQVDKKFIPVV----------AGGT 927
+D+SSG L P K + +VLQQVD KFI + AGG
Sbjct: 1158 VDVSSGQAESLAVKIHNILYPYRFTKGMIHSMQVLQQVDNKFIACLMSTKTEENGEAGGN 1217
Query: 928 LAV-IDQHAADERIRLEEL-----RHKVLSGEGKS---VAYLDAEQELVLPEIGYQLLQN 978
L V +DQHAA ERIRLE+L + G G+ + L E+ + E +LL
Sbjct: 1218 LLVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWC 1277
Query: 979 FAEQIKDWGWICNIHTQGSRSF-----------NKNLNLLQRQITVITLLAVPCIFGVNL 1027
+ + ++D G + + S S + N L+R + +T V
Sbjct: 1278 YHKNLEDLG-LEFVFPDTSDSLVLVGKVPLCFVEREANELRRGRSTVTKSIVEEFIR--- 1333
Query: 1028 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1087
+ LE LQ G T P +V +VL S+AC GAI F D L E ++E L
Sbjct: 1334 ---EQLELLQTTGGIQG--TLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQ 1388
Query: 1088 LCFQCAHGRPTTVPLVNLEALHKQ------IAQLNNSSELWHGLHRGEISLKRA 1135
L FQCAHGRP+ +PL +++ L ++ + +L ++ W + E +++
Sbjct: 1389 LPFQCAHGRPSMLPLADIDHLEQEKQIKPNLTKLRKMAQAWRLFGKAECDTRQS 1442
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 4 INSRYVCKGPIHKLLNHL--AASFDC----SDSWKANNGFLKGKRSKSQACPAYLLNLRC 57
+N R V + +HKL++ L S C + + N L+ RS + Y++N++C
Sbjct: 254 VNKRLVLRTKLHKLIDFLLRKESIICKPKNGPTSRQMNSSLR-HRSTPELYGIYVINVQC 312
Query: 58 PHSLYDLTFDPLKTHVVFKDWEPVLAFIERAIR 90
YD+ +P KT + F++W+ +L I+ ++
Sbjct: 313 QFCEYDVCMEPAKTLIEFQNWDTLLFCIQEGVK 345
>sp|Q12083|MLH3_YEAST DNA mismatch repair protein MLH3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MLH3 PE=1 SV=1
Length = 715
Score = 92.4 bits (228), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 113/237 (47%), Gaps = 35/237 (14%)
Query: 900 SINKSCLEDAKVLQQVDKKFIPVVAGG-------TLAVIDQHAADERIRLEELRHKVLS- 951
SI++S L +V+ QVDKKFI + L ++DQHA DERIRLEEL + +L+
Sbjct: 484 SISRSVLAKYEVINQVDKKFILIRCLDQSIHNCPLLVLVDQHACDERIRLEELFYSLLTE 543
Query: 952 -GEGKSVA-----------------YLDAEQELVLPEIGYQLLQNFAE----QIKDWGWI 989
G VA + + E IGY+ ++ E +IK +
Sbjct: 544 VVTGTFVARDLKDCCIEVDRTEADLFKHYQSEFKKWGIGYETIEGTMETSLLEIKTLPEM 603
Query: 990 CNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTP 1049
G + + K + LLQ + +P ++LS + + +L SS P
Sbjct: 604 LTSKYNGDKDYLK-MVLLQHAHDLKDFKKLP----MDLSHFENYTSVDKLYWWKYSSCVP 658
Query: 1050 PSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1106
+LNSKACR A+MFGD L EC +++ +L + F+CAHGRP+ VP+ L+
Sbjct: 659 TVFHEILNSKACRSAVMFGDELTRQECIILISKLSRCHNPFECAHGRPSMVPIAELK 715
>sp|P54280|PMS1_SCHPO DNA mismatch repair protein pms1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=pms1 PE=3 SV=1
Length = 794
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/241 (31%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 874 DIHNQDNILDISS--GLLHLTGEFFIPDSIN----KSCLEDAKVLQQVDKKFIPVVAGGT 927
DI D +L S+ G++H + D +N K+ +V+ Q ++ FI VV G
Sbjct: 570 DIVRSDALLKFSNKIGVVHDISDENQEDHLNLTVHKADFLRMRVVGQFNRGFIVVVHGNN 629
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 987
L +IDQHA+DE+ E L+ ++ Q+LVLP+ +L E+
Sbjct: 630 LFIIDQHASDEKFNYEHLKSNLVINS----------QDLVLPK---RLDLAATEETVLID 676
Query: 988 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1047
I I +G F ++L QR TLL+VP V DLLE + L++
Sbjct: 677 HIDLIRRKG---FGVAIDLNQRVGNRCTLLSVPTSKNVIFDTSDLLEIISVLSEHPQIDP 733
Query: 1048 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPLVNLEA 1107
+ R+L SKACR ++M G +L SE IV L + S + C HGRPT L+ L+
Sbjct: 734 FSSRLERMLASKACRSSVMIGRALTISEMNTIVRHLAELSKPWNCPHGRPTMRHLLRLKD 793
Query: 1108 L 1108
+
Sbjct: 794 I 794
>sp|P54278|PMS2_HUMAN Mismatch repair endonuclease PMS2 OS=Homo sapiens GN=PMS2 PE=1 SV=2
Length = 862
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 18/209 (8%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELR-HKVLSGEGKSVAY 959
I+K+ + +++ Q + FI + ++DQHA DE+ E L+ H VL G+
Sbjct: 668 ISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQ-----R 722
Query: 960 LDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAV 1019
L A Q L L + +L E + G+ I ++N + +R L+++
Sbjct: 723 LIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVI--------DENAPVTERA----KLISL 770
Query: 1020 PCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALI 1079
P D+ E + L+D+ G P V ++ S+ACR ++M G +L SE +
Sbjct: 771 PTSKNWTFGPQDVDELIFMLSDSPGVMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKL 830
Query: 1080 VEELKQTSLCFQCAHGRPTTVPLVNLEAL 1108
+ + + + C HGRPT + NL +
Sbjct: 831 ITHMGEMDHPWNCPHGRPTMRHIANLGVI 859
>sp|P54279|PMS2_MOUSE Mismatch repair endonuclease PMS2 OS=Mus musculus GN=Pms2 PE=1 SV=1
Length = 859
Score = 67.4 bits (163), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 96/211 (45%), Gaps = 18/211 (8%)
Query: 901 INKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELR-HKVLSGEGKSVAY 959
I+KS + ++L Q + FI L ++DQHAADE+ E L+ H VL +
Sbjct: 665 ISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQ-----R 719
Query: 960 LDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAV 1019
L Q L L + +L E + G+ I +++ + +R L+++
Sbjct: 720 LITPQTLNLTAVNEAVLIENLEIFRKNGFDFVI--------DEDAPVTERA----KLISL 767
Query: 1020 PCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALI 1079
P D+ E + L+D+ G P V ++ S+ACR ++M G +L SE +
Sbjct: 768 PTSKNWTFGPQDIDELIFMLSDSPGVMCRPSRVRQMFASRACRKSVMIGTALNASEMKKL 827
Query: 1080 VEELKQTSLCFQCAHGRPTTVPLVNLEALHK 1110
+ + + + C HGRPT + NL+ + +
Sbjct: 828 ITHMGEMDHPWNCPHGRPTMRHVANLDVISQ 858
>sp|B2TIB8|MUTL_CLOBB DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Eklund 17B / Type B) GN=mutL PE=3 SV=1
Length = 672
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 83/197 (42%), Gaps = 30/197 (15%)
Query: 910 KVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLP 969
K++ Q +K +I GTL +IDQHAA E+I E+ + ++ G+ Q L++P
Sbjct: 485 KIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDIICGD-------IIIQPLMIP 537
Query: 970 EI------GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1023
+ Y + + K+ G+ I G S I L VP
Sbjct: 538 TVIDLSMDDYSYFEENKDVFKEAGF--TIEDFGGTS--------------IALKEVPYFL 581
Query: 1024 GVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEEL 1083
G LE L L + GS T + +KAC+ A+ DSL E ++EEL
Sbjct: 582 GKLKPKNLFLEILDNLKNL-GSGKTTEVKYNAIATKACKSAVKGNDSLDELEMVKLIEEL 640
Query: 1084 KQTSLCFQCAHGRPTTV 1100
+ F C HGRPT +
Sbjct: 641 RYIDDPFHCPHGRPTII 657
>sp|Q54QA0|PMS1_DICDI Mismatch repair endonuclease pms1 OS=Dictyostelium discoideum GN=pms1
PE=3 SV=1
Length = 1022
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 911 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSG-------EGKSVAYLDAE 963
V+ Q + FI G L +IDQHAADE+ E L V S + +++ L +E
Sbjct: 816 VIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFEILSKSVESSINSQPLLKPDTLSDLTSE 875
Query: 964 QELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1023
+EL++ E + K G+ I F I L A P I
Sbjct: 876 EELIIIE--------NVDLFKKNGFKFIIDHDAPTRFK------------IKLSAFPIIH 915
Query: 1024 GVNLSDVDLLE--FLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1081
G + D+ E F+ + + GS P + +L SKACR +IM G +L E ++
Sbjct: 916 GQSFGIKDIYEWIFMIKESSIPGSVNKIPRLNSLLASKACRKSIMVGTTLTHKEMKDVLN 975
Query: 1082 ELKQTSLCFQCAHGRPTTVPLVNL 1105
L + C HGRPT LV+L
Sbjct: 976 NLSTLDNPWCCPHGRPTMRHLVDL 999
>sp|Q5GSP0|MUTL_WOLTR DNA mismatch repair protein MutL OS=Wolbachia sp. subsp. Brugia
malayi (strain TRS) GN=mutL PE=3 SV=1
Length = 628
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 90/189 (47%), Gaps = 19/189 (10%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
QV +I A G L ++DQHAA ER+ E L+ K K L +E + + G
Sbjct: 447 QVYNTYIIAEARGKLIIVDQHAAHERLVYECLKQK---SSIKRQKLLLSEVVEIKNQAGM 503
Query: 974 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1033
++++ + +++ + G+ I+++ NK + + +P I G L+
Sbjct: 504 EMVEVYKDKLFEMGFDIQINSE-----NK-----------VIVKEIPAILGTIDVKEMLI 547
Query: 1034 EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCA 1093
+ + +L + + V ++L + AC G+I G ++ E +++ ++++T QC
Sbjct: 548 DIVDRLMEIEDMLPIEDKVNKILATIACHGSIRAGRTMKLEEMNVLLRQMEETPYSGQCN 607
Query: 1094 HGRPTTVPL 1102
HGRPT + +
Sbjct: 608 HGRPTHIEM 616
>sp|B9JA11|MUTL_AGRRK DNA mismatch repair protein MutL OS=Agrobacterium radiobacter (strain
K84 / ATCC BAA-868) GN=mutL PE=3 SV=1
Length = 606
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 25/193 (12%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
Q+ + +I L ++DQHAA ER+ EE+R K L + S L + + LPE
Sbjct: 423 QLHENYIVAQTDDGLVIVDQHAAHERLVFEEMR-KALHSKRLSSQVLLIPEIVDLPEEDC 481
Query: 974 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1033
L FA+++ + G G+ I + P + G +VD
Sbjct: 482 DRLMVFADELGELGLAIERFGPGA----------------IAVRETPAMLG----EVDAQ 521
Query: 1034 EFLQQLADT----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1089
++QLAD D +S + V + AC G++ G L P E ++ +++ T
Sbjct: 522 GLIRQLADEIAEWDTASGLAAKLEYVAATMACHGSVRSGRRLRPEEMNALLRQMEATPGS 581
Query: 1090 FQCAHGRPTTVPL 1102
QC HGRPT + L
Sbjct: 582 GQCNHGRPTYIEL 594
>sp|Q895H3|MUTL_CLOTE DNA mismatch repair protein MutL OS=Clostridium tetani (strain
Massachusetts / E88) GN=mutL PE=3 SV=1
Length = 620
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 34/211 (16%)
Query: 904 SCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAE 963
S L D K++ Q D +I + L +IDQHAA E+I E R K+ E KS
Sbjct: 427 SKLPDMKIIGQFDNTYILAESVKNLYIIDQHAAHEKILFETYRDKIKKDEVKS------- 479
Query: 964 QELVLPEIGYQL-LQNFAEQIKD----WGWICNIHTQGSRSFNKNLNLLQRQITVITLLA 1018
+L+L I +L ++F+ + + + NI G + N +
Sbjct: 480 -QLLLQPIVLELDSEDFSYYVDNKELFYKTGFNIEVFGENTIN--------------IRE 524
Query: 1019 VPCIFG---VNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSE 1075
VP I G +N +D++ ++ + GS T + AC+ A+ D L E
Sbjct: 525 VPFIMGKPDINNLFMDIINNIKAM----GSGETIEVKYDSIAMLACKSAVKAHDKLSKEE 580
Query: 1076 CALIVEELKQTSLCFQCAHGRPTTVPLVNLE 1106
++ +L+ F C HGRPT + + +LE
Sbjct: 581 MEALINDLRFAKDPFNCPHGRPTIIKITSLE 611
>sp|C0R515|MUTL_WOLWR DNA mismatch repair protein MutL OS=Wolbachia sp. subsp. Drosophila
simulans (strain wRi) GN=mutL PE=3 SV=1
Length = 605
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 19/189 (10%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
QV +I L ++DQHAA ER+ E L+ K S+ Q+L+LPE
Sbjct: 424 QVYNTYIIAEVRDKLIIVDQHAAHERLVYECLKQK------SSIK----RQKLLLPE--- 470
Query: 974 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1033
+IK+ + I + F ++ + + + +P I G L+
Sbjct: 471 ------TVEIKNQAGMEMIEIYKDKLFEMGFDIEIKSENKVIVKEIPAILGAIDVKEMLI 524
Query: 1034 EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCA 1093
+ +L + + + V ++L + AC G+I G + E ++ ++++T QC
Sbjct: 525 NIIDRLTEIEDTLPVEDKVNKILATIACHGSIRAGRKMRLDEMNELLRQMEKTPYSGQCN 584
Query: 1094 HGRPTTVPL 1102
HGRPT + +
Sbjct: 585 HGRPTYIEM 593
>sp|Q8UHI3|MUTL_AGRT5 DNA mismatch repair protein MutL OS=Agrobacterium tumefaciens (strain
C58 / ATCC 33970) GN=mutL PE=3 SV=2
Length = 606
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 27/194 (13%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
Q+ + +I L ++DQHAA ER+ EE+R+ + S S Q L++PEI
Sbjct: 423 QLHENYIIAQTENGLVIVDQHAAHERLVFEEMRNALHSRRPPS-------QVLLIPEI-I 474
Query: 974 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQR-QITVITLLAVPCIFGVNLSDVDL 1032
L + +++ D H G F+ +++R I + P + G +V++
Sbjct: 475 DLPEEDCDRLMD-------HAAG---FDALGLVIERFGPGAIAVRETPAMLG----EVNV 520
Query: 1033 LEFLQQLADT----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1088
++QLAD D +ST + V + AC G++ G + P E ++ +++ T
Sbjct: 521 QGLVRQLADEIAEWDAASTLANKLEYVAATMACHGSVRSGRRMRPEEMNALLRQMENTPG 580
Query: 1089 CFQCAHGRPTTVPL 1102
QC HGRPT + L
Sbjct: 581 SGQCNHGRPTYIEL 594
>sp|Q97I20|MUTL_CLOAB DNA mismatch repair protein MutL OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=mutL PE=3 SV=1
Length = 622
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 903 KSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDA 962
K+ + +V+ Q + +I + L +IDQHAA E+I E+ R + + K V+
Sbjct: 428 KAKFPELRVIGQFNNTYILAESFEELYIIDQHAAHEKILFEKYREDI---KNKGVS---- 480
Query: 963 EQELVLPEIGYQLLQNFA------EQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITL 1016
Q L+ P + L ++F E K+ G++ F N + +
Sbjct: 481 SQILITPSVVELLPEDFIYYDENKEVFKNAGFVI-------EYFGDN---------TVAI 524
Query: 1017 LAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSEC 1076
VP G L LE + L + GS T R + + AC+ A+ L E
Sbjct: 525 KEVPLFLGKPLVKDLFLEIIDNLKNM-GSGETSEVKYRSIATAACKSAVKAYHELTHDEM 583
Query: 1077 ALIVEELKQTSLCFQCAHGRPTTVPL 1102
++++L+ F C HGRPT V L
Sbjct: 584 KTLIQDLRFAEDPFNCPHGRPTIVRL 609
>sp|Q219I5|MUTL_RHOPB DNA mismatch repair protein MutL OS=Rhodopseudomonas palustris
(strain BisB18) GN=mutL PE=3 SV=1
Length = 599
Score = 57.4 bits (137), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 17/189 (8%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
Q+ + +I L V+DQHAA ER+ E+L+ L+ G L + + L E
Sbjct: 416 QIHQTYIVAQTRDGLVVVDQHAAHERLVYEKLKAS-LATNGVQRQILLIPEIVELDEATV 474
Query: 974 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1033
+ L E++ +G + G+ + + P + G + L
Sbjct: 475 ERLVARGEELATFGLVVESFGPGA----------------VAVRETPSLLGKTDAGALLR 518
Query: 1034 EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCA 1093
+ + +A+ D + +L V + AC G++ G L P E ++ E++ T QC
Sbjct: 519 DLAEHMAEWDEALPLERRLLHVAATMACHGSVRAGRVLKPEEMNALLREMEDTPNSGQCN 578
Query: 1094 HGRPTTVPL 1102
HGRPT V L
Sbjct: 579 HGRPTYVEL 587
>sp|A5V3J3|MUTL_SPHWW DNA mismatch repair protein MutL OS=Sphingomonas wittichii (strain
RW1 / DSM 6014 / JCM 10273) GN=mutL PE=3 SV=1
Length = 594
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 19/190 (10%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
QV +I A L ++DQHAA ER+ LE +R + G A Q L+LPE+
Sbjct: 411 QVAATYIVAEAEDGLVIVDQHAAHERLVLERMRRAMADGG-------VARQALLLPEV-- 461
Query: 974 QLLQNFAEQIKDWGWICN-IHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1032
++ + G C+ + T+ + L L + + + A P + G +
Sbjct: 462 -------VELDEVG--CDRLETRIAELAEMGLELERFGPKAMLVRATPALLGQGDVHGLI 512
Query: 1033 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1092
++ +LA D + + + V + AC G++ G +L +E ++ E++ T QC
Sbjct: 513 VDLADELAAYDEALSLKERLDHVAATMACHGSVRAGRTLSVAEMNALLREMEVTPHSGQC 572
Query: 1093 AHGRPTTVPL 1102
HGRPT + L
Sbjct: 573 NHGRPTWIKL 582
>sp|Q07RR2|MUTL_RHOP5 DNA mismatch repair protein MutL OS=Rhodopseudomonas palustris
(strain BisA53) GN=mutL PE=3 SV=1
Length = 603
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 19/190 (10%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
Q+ + +I L ++DQHAA ER+ E+L+ + S + Q L++PEI
Sbjct: 420 QIHETYIVAQTRTGLVIVDQHAAHERLVYEKLKASMASNGVQ-------RQLLLIPEI-V 471
Query: 974 QLLQNFAEQIKDWGW-ICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDL 1032
+L + EQ+ D +C+ SF + + VP + G + L
Sbjct: 472 ELDEATVEQLLDRAEELCSFGL-AIDSFGPG---------AVAVREVPALLGKANAASLL 521
Query: 1033 LEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQC 1092
+ + +A+ D + +L V + AC G++ G L P E ++ E++ T QC
Sbjct: 522 RDLAEHMAEWDEALPLERRLLHVAATMACHGSVRAGRILKPEEMNALLREMEATPNSGQC 581
Query: 1093 AHGRPTTVPL 1102
HGRPT V L
Sbjct: 582 NHGRPTYVEL 591
>sp|A0Q0M7|MUTL_CLONN DNA mismatch repair protein MutL OS=Clostridium novyi (strain NT)
GN=mutL PE=3 SV=1
Length = 645
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 911 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPE 970
+L Q +K +I + T +IDQHAA E+I E+ ++++ E + V Q L+ P
Sbjct: 459 ILGQFNKTYILAESLDTFYMIDQHAAHEKILFEKFKNQI---ENRDVI----SQILLTPV 511
Query: 971 IGYQLLQNFAEQIKDWGWICNI-HTQG--SRSFNKNLNLLQRQITVITLLAVPCIFG-VN 1026
I ++ AE + NI H G + F N +I++ P + G V+
Sbjct: 512 I----IEMSAEDFAYYSENINIFHESGFVTEVFGDN---------IISIREAPMLLGKVS 558
Query: 1027 LSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1086
D LE + + G+ +++S AC+ AI +L E ++E+L+
Sbjct: 559 TKDF-FLEIFDDIKNM-GNGNIAKIKHNMISSLACKAAIKANHTLSYEEMNSLIEDLRYI 616
Query: 1087 SLCFQCAHGRPTTVPLVNLEALHKQIAQL 1115
F C HGRPT + L L+ + K+ ++
Sbjct: 617 EEPFNCPHGRPTIIKLT-LKEIEKKFKRI 644
>sp|B9JSD6|MUTL_AGRVS DNA mismatch repair protein MutL OS=Agrobacterium vitis (strain S4 /
ATCC BAA-846) GN=mutL PE=3 SV=1
Length = 617
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 81/193 (41%), Gaps = 25/193 (12%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
QV +I L ++DQHAA ER+ E++R K LSG L + + LPE
Sbjct: 434 QVHANYIVAQTQDGLVIVDQHAAHERLVFEDMR-KALSGRRLPSQGLLIPEIIGLPEEDC 492
Query: 974 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1033
L + AE + G G+ I + P + G +VD+
Sbjct: 493 DRLMDHAENLDRLGLAIERFGPGA----------------IAVRETPAMLG----EVDVP 532
Query: 1034 EFLQQLADTDGSSTTPPSVL----RVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1089
++QLAD T S+ V + AC G++ G L E ++ ++++T
Sbjct: 533 GLVRQLADEIAEWETAGSLFARLEHVAATMACHGSVRSGRLLRVEEMNALLRKMEETPGS 592
Query: 1090 FQCAHGRPTTVPL 1102
QC HGRPT + L
Sbjct: 593 GQCNHGRPTYIEL 605
>sp|C1FNT8|MUTL_CLOBJ DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Kyoto / Type A2) GN=mutL PE=3 SV=1
Length = 666
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 96/211 (45%), Gaps = 25/211 (11%)
Query: 908 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 967
D K++ Q + +I + L +IDQHAA E++ E+ + ++ G S L + +
Sbjct: 477 DMKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILL-SPVVIE 535
Query: 968 LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV-N 1026
L E + + + + K+ G+ ++ T G + N + VP I G N
Sbjct: 536 LSEDEFNIYEENKDIFKNSGF--SVETFGECTIN--------------IKEVPLILGKPN 579
Query: 1027 LSD--VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1084
+ D +D+L L+ + + S+ ++ + AC+ A+ D+L E ++E +
Sbjct: 580 VEDLFMDILYNLKNMKSKETSTIKYNAIATL----ACKSAVKANDNLKEEEIKKLIENML 635
Query: 1085 QTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1115
+ + C HGRPT + L+ L K+ ++
Sbjct: 636 TLNNPYTCPHGRPTMIKFT-LKDLEKKFKRI 665
>sp|Q01QW7|MUTL_SOLUE DNA mismatch repair protein MutL OS=Solibacter usitatus (strain
Ellin6076) GN=mutL PE=3 SV=1
Length = 660
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 95/220 (43%), Gaps = 29/220 (13%)
Query: 889 LHLTGEF---FIP-DSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEE 944
L + GEF IP ++ S L D + L Q+ + FI L +IDQH A ERI E+
Sbjct: 448 LDMHGEFPLEAIPAPEMSLSALSDLRPLGQIHESFIIAAGRDGLWIIDQHVAHERILFEQ 507
Query: 945 LRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICN-IHTQG--SRSFN 1001
+ + +G ++ Q L++P I LQ AEQ D+ I + +H G + F
Sbjct: 508 VLKQRAAGRVET-------QRLLMPMI----LQLSAEQQIDYARIADELHASGFETEPFG 556
Query: 1002 KNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLR-VLNSKA 1060
I + A P G + L E L ++A+ + + + + R + S A
Sbjct: 557 NR---------TIAVKAAPAAVGPQDLERILFEIL-EIAENEMRTNSLDDLRRNICASIA 606
Query: 1061 CRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTV 1100
CR AI L ++ ++ L T C HGRP +
Sbjct: 607 CRAAIKINMRLDLAKMEWLLRALAATDCPMSCPHGRPIAM 646
>sp|A6LWJ1|MUTL_CLOB8 DNA mismatch repair protein MutL OS=Clostridium beijerinckii (strain
ATCC 51743 / NCIMB 8052) GN=mutL PE=3 SV=1
Length = 664
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 92/201 (45%), Gaps = 28/201 (13%)
Query: 911 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPE 970
++ Q +K +I GTL +IDQHAA E+I E+ ++ EG + Q L++P
Sbjct: 478 IIGQYNKTYILGEYDGTLYMIDQHAAHEKILFEKYLKEI--EEGTIII-----QPLIVPS 530
Query: 971 IGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQI--TVITLLAVPCIFG-VNL 1027
I I D+ + + ++ + L + + ++L VP G +N
Sbjct: 531 I-------IDLSIDDYSYF-----EENKDIFREAGFLLEEFGGSSLSLKEVPYFLGRLNP 578
Query: 1028 SDV--DLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQ 1085
++ D+L+ L+ L G+ T + +KAC+ AI D L +E ++E+L+
Sbjct: 579 KNLFLDILDNLKNL----GNGKTSEVKHNAIATKACKAAIKGNDKLEMNEMIKLIEDLRY 634
Query: 1086 TSLCFQCAHGRPTTVPLVNLE 1106
F C HGRP + +++
Sbjct: 635 IDDPFHCPHGRPVIIKFTSID 655
>sp|B3PRD9|MUTL_RHIE6 DNA mismatch repair protein MutL OS=Rhizobium etli (strain CIAT 652)
GN=mutL PE=3 SV=1
Length = 606
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 79/193 (40%), Gaps = 25/193 (12%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
Q+ +I L ++DQHAA ER+ E +R + S S L E + LPE
Sbjct: 423 QIHANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQVLLIPEI-IDLPEEDC 481
Query: 974 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1033
L A ++ + G G+ I + P + G +VD
Sbjct: 482 DRLMQHAAELSELGLAIERFGPGA----------------IAVRETPAMLG----EVDAH 521
Query: 1034 EFLQQLADT----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLC 1089
++QLAD D +S + V + AC G++ G L P E ++ E++ T
Sbjct: 522 GLIRQLADEIAEWDTASGLSAKLEYVAATMACHGSVRSGRRLRPEEMNALLREMEVTPGS 581
Query: 1090 FQCAHGRPTTVPL 1102
QC HGRPT + L
Sbjct: 582 GQCNHGRPTYIEL 594
>sp|Q131I8|MUTL_RHOPS DNA mismatch repair protein MutL OS=Rhodopseudomonas palustris
(strain BisB5) GN=mutL PE=3 SV=1
Length = 597
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 37/185 (20%)
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDA----EQELVLPEI------GYQLLQ 977
L V+DQHAA ERI E L+ A LDA Q L++P+I + L
Sbjct: 428 LIVVDQHAAHERIVYERLK-----------ASLDANGVQRQILLIPDIVEMDEATVERLV 476
Query: 978 NFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQ 1037
AE++ +G + G+ + + +LL + VN + + L + +
Sbjct: 477 ARAEELSKFGLVVESFGPGAVAVRETPSLLGK---------------VNAASL-LRDLAE 520
Query: 1038 QLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1097
+A+ D + ++ V + AC G++ G L P E ++ E++ T QC HGRP
Sbjct: 521 HMAEWDEALPLERRLMHVAATMACHGSVRAGRVLKPEEMNALLREMEATPNSGQCNHGRP 580
Query: 1098 TTVPL 1102
T V L
Sbjct: 581 TYVEL 585
>sp|B1IM67|MUTL_CLOBK DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Okra / Type B1) GN=mutL PE=3 SV=1
Length = 666
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 908 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 967
D K++ Q + +I + L +IDQHAA E++ E+ + ++ G S L + +
Sbjct: 477 DMKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILL-SPVVIE 535
Query: 968 LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV-N 1026
L E + + + + K+ G+ ++ T G + N + VP I G N
Sbjct: 536 LSEDEFNIYEENKDIFKNSGF--SVETFGEYTIN--------------IKEVPLILGKPN 579
Query: 1027 LSD--VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1084
+ + +D+L L+ + + S+ ++ + AC+ A+ D+L E ++E++
Sbjct: 580 VENLFMDILYNLKNMKSKETSTIKYNAIATL----ACKSAVKANDNLKEEEIKKLIEDML 635
Query: 1085 QTSLCFQCAHGRPTTV--PLVNLEALHKQI 1112
+ + C HGRPT + L +LE K+I
Sbjct: 636 ILNNPYTCPHGRPTMIKFTLKDLEKKFKRI 665
>sp|B5ZS00|MUTL_RHILW DNA mismatch repair protein MutL OS=Rhizobium leguminosarum bv.
trifolii (strain WSM2304) GN=mutL PE=3 SV=1
Length = 600
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 39/200 (19%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
Q+ +I L ++DQHAA ER+ E +R + S K +A Q L++PEI
Sbjct: 417 QIHANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHS---KRLA----SQVLLIPEIVD 469
Query: 974 -------QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVN 1026
+L+Q+ AE + + G G+ I + P + G
Sbjct: 470 IPEEDCDRLMQHAAE-LAELGLAIERFGPGA----------------IAVRETPAMLG-- 510
Query: 1027 LSDVDLLEFLQQLADT----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1082
+VD ++QLAD D +S + V + AC G++ G L P E ++ E
Sbjct: 511 --EVDAHGLIRQLADEIAEWDTASGLSAKLEYVAATMACHGSVRSGRRLRPEEMNALLRE 568
Query: 1083 LKQTSLCFQCAHGRPTTVPL 1102
++ T QC HGRPT + L
Sbjct: 569 MEVTPGSGQCNHGRPTYIEL 588
>sp|Q1MKU7|MUTL_RHIL3 DNA mismatch repair protein MutL OS=Rhizobium leguminosarum bv.
viciae (strain 3841) GN=mutL PE=3 SV=1
Length = 600
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 39/200 (19%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
Q+ +I L ++DQHAA ER+ E +R + S K +A Q L++PEI
Sbjct: 417 QIHANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHS---KRLA----SQVLLIPEIVD 469
Query: 974 -------QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVN 1026
+L+Q+ AE + + G G+ I + P + G
Sbjct: 470 IPEEDCDRLMQHAAE-LSELGLAIERFGPGA----------------IAVRETPAMLG-- 510
Query: 1027 LSDVDLLEFLQQLADT----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1082
+VD ++QLAD D +S + V + AC G++ G L P E ++ E
Sbjct: 511 --EVDAHGLIRQLADEIAEWDTASGLSAKLEYVAATMACHGSVRSGRRLRPEEMNALLRE 568
Query: 1083 LKQTSLCFQCAHGRPTTVPL 1102
++ T QC HGRPT + L
Sbjct: 569 MEVTPGSGQCNHGRPTYIEL 588
>sp|Q2GJE2|MUTL_ANAPZ DNA mismatch repair protein MutL OS=Anaplasma phagocytophilum (strain
HZ) GN=mutL PE=3 SV=1
Length = 634
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 30/196 (15%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPE--- 970
Q+ +++I AG + ++DQHAA ER+ E ++ KV EG Q L++PE
Sbjct: 450 QLFERYIISRAGDYVIIVDQHAAHERLVCEYIK-KVTEQEGIK------RQVLLMPEFIE 502
Query: 971 IG----YQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVN 1026
+G +LL + E+++D G I + G +L ++ R+ VP IFGV
Sbjct: 503 LGNEYELELLTEYREKLRDLGLI--VEPMG------DLTVVVRE--------VPAIFGVV 546
Query: 1027 LSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1086
+ + + L+ + + + + AC +I G + E ++ ++ T
Sbjct: 547 DAKALISKILESIMAKGDELFVKGKLSHICGTVACYSSIRSGRIMKLEEMNSLLRHMEST 606
Query: 1087 SLCFQCAHGRPTTVPL 1102
QC HGRPT V L
Sbjct: 607 PHSGQCNHGRPTYVKL 622
>sp|A7HNR3|MUTL_FERNB DNA mismatch repair protein MutL OS=Fervidobacterium nodosum (strain
ATCC 35602 / DSM 5306 / Rt17-B1) GN=mutL PE=3 SV=1
Length = 588
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 80/176 (45%), Gaps = 23/176 (13%)
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 987
L +ID HAA ERI E+L+ + ++V L + L + QL Q ++ K +G
Sbjct: 423 LVIIDFHAAHERIIYEQLKE----NKFETVQLL-IPLHIKLGKSFLQLSQQLTDEFKKYG 477
Query: 988 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV-NLSDVDLLEFLQQLADTDGSS 1046
+ I T L+ + + +P I V + S+V FL+ L +
Sbjct: 478 FDFEIKT------------LEDGSGEVVIKQIPSILKVTDASNV----FLEVLEEYRIPF 521
Query: 1047 TTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1102
P + VL SKAC+ A+ GD L E I++E+K +L C HGRP + L
Sbjct: 522 EKPKGLTYVLASKACKSAVKTGDKLSHDEVQQIIKEIKSKNLL-TCPHGRPIMMKL 576
>sp|Q2VYV5|MUTL_MAGSA DNA mismatch repair protein MutL OS=Magnetospirillum magneticum
(strain AMB-1 / ATCC 700264) GN=mutL PE=3 SV=1
Length = 607
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 29/195 (14%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI-- 971
Q+ +I L ++DQHAA ER+ E L+ + G+ A Q L+LPE+
Sbjct: 424 QLHDTYIVAETADGLVIVDQHAAHERLVFERLKLGLTEGQ-------VARQGLLLPEVVD 476
Query: 972 ----GYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNL 1027
G + A + G + + G+ + + VP + G +
Sbjct: 477 LGDAGAARVTERAGDLARLGLVIDSFGPGA----------------VVVREVPALLGDDD 520
Query: 1028 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1087
+ + +LA+ S+ +L + + AC G++ G L E ++ ++ T
Sbjct: 521 VQGLVRDLADELAEWGASTVLEERLLHICATMACHGSVRAGRRLSVPEMNALLRRMEATP 580
Query: 1088 LCFQCAHGRPTTVPL 1102
L QC HGRPT V L
Sbjct: 581 LSGQCNHGRPTHVSL 595
>sp|B1KSA2|MUTL_CLOBM DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Loch Maree / Type A3) GN=mutL PE=3 SV=1
Length = 666
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 94/216 (43%), Gaps = 38/216 (17%)
Query: 908 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLD------ 961
D K++ Q + +I + L +IDQHAA E++ E+ + ++ G S L
Sbjct: 477 DMKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIEL 536
Query: 962 AEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC 1021
+E E + E + +N ++++G + I + VP
Sbjct: 537 SEDEFNIYEENKDIFKNSGFAVENFGE-----------------------STINIKEVPL 573
Query: 1022 IFGV-NLSD--VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1078
I G N+ + +D+L L+ + + S+ ++ + AC+ A+ D+L E
Sbjct: 574 ILGKPNVENLFMDILYNLKNMKSKETSTIKYNAIATL----ACKSAVKANDNLKEEEIKK 629
Query: 1079 IVEELKQTSLCFQCAHGRPTTV--PLVNLEALHKQI 1112
++E++ + + C HGRPT + L +LE K+I
Sbjct: 630 LIEDMLILNNPYTCPHGRPTMIKFTLKDLEKKFKRI 665
>sp|A7FUK9|MUTL_CLOB1 DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
ATCC 19397 / Type A) GN=mutL PE=3 SV=1
Length = 666
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 97/211 (45%), Gaps = 25/211 (11%)
Query: 908 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 967
D K++ Q + +I + L +IDQHAA E++ E+ + ++ G S L + +
Sbjct: 477 DMKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKCEIEKGYVISQILL-SPVVIE 535
Query: 968 LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV-N 1026
L E + + + + K+ G+ ++ T G + N + VP I G N
Sbjct: 536 LSEDEFNIYEENKDIFKNSGF--SVETFGEYTIN--------------IKEVPLILGKPN 579
Query: 1027 LSD--VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELK 1084
+ + +D+L L+ + + S+ ++ + AC+ A+ D+L E ++E++
Sbjct: 580 VENLFMDILYNLKNMKSKETSTIKYNAIATL----ACKSAVKANDNLKEEEIKKLIEDML 635
Query: 1085 QTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1115
+ + C HGRPT + L+ L K+ ++
Sbjct: 636 ILNNPYTCPHGRPTMIKFT-LKDLEKKFKRI 665
>sp|B8CX97|MUTL_HALOH DNA mismatch repair protein MutL OS=Halothermothrix orenii (strain H
168 / OCM 544 / DSM 9562) GN=mutL PE=3 SV=1
Length = 644
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 19/205 (9%)
Query: 897 IPDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKS 956
I ++ NK + +VL Q+ +I L +IDQH A ERI + K + E S
Sbjct: 444 IKENKNKMDIPIKRVLGQIKNTYIIAEGRDGLYIIDQHNAHERILYQSFIEKYNNSEIVS 503
Query: 957 V-AYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVIT 1015
+ E PE ++L+++ Q++ G+ + G SF
Sbjct: 504 QPLVVPVNIETTAPEA--EVLKSYLPQLEKMGF--KLEVFGINSF--------------I 545
Query: 1016 LLAVPCIFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSE 1075
+ VP + + + E + +L + D + + +++ +CRGAI G+ L E
Sbjct: 546 VREVPSLIKKRSNKRVVREVIDKLLEHDKAMKPSELINEIISYMSCRGAIKAGEYLDKKE 605
Query: 1076 CALIVEELKQTSLCFQCAHGRPTTV 1100
I+E L +T ++C HGRP +
Sbjct: 606 AEQIIEGLFKTDNPYRCPHGRPIII 630
>sp|A2SSN1|MUTL_METLZ DNA mismatch repair protein MutL OS=Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z) GN=mutL PE=3 SV=1
Length = 588
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 84/194 (43%), Gaps = 21/194 (10%)
Query: 910 KVLQQVDKKFIPVV-AGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVL 968
+VL Q+ +I G L V+DQHAA ERI ++L + S E A QEL++
Sbjct: 403 EVLGQIGDTYILAKNESGDLIVVDQHAAHERIMYDQLLARSSSAE--------AGQELIV 454
Query: 969 PEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLS 1028
P+ L + + D + F K++ +++ +VP + L
Sbjct: 455 PQ-PITLSKKETAALPDLLDVLAAAGYLLEPFGKDVWMVR---------SVPVVSS-TLG 503
Query: 1029 DVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSL 1088
D D + + A DG T + RVL + ACR + L + ++ +L T
Sbjct: 504 DPDTIHAILDAA-LDGVGNTDEVLDRVLKTAACRAVVKGNTPLTIEQMQRLLRQLMATKS 562
Query: 1089 CFQCAHGRPTTVPL 1102
+ C HGRPTT+ L
Sbjct: 563 PYTCPHGRPTTIVL 576
>sp|Q2KBX7|MUTL_RHIEC DNA mismatch repair protein MutL OS=Rhizobium etli (strain CFN 42 /
ATCC 51251) GN=mutL PE=3 SV=1
Length = 610
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 86/209 (41%), Gaps = 27/209 (12%)
Query: 898 PDSINKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSV 957
P+++ + L A+ Q+ +I L ++DQHAA ER+ E +R + S S
Sbjct: 413 PETVGRYPLGAARA--QIHANYIVAQTEDGLVIVDQHAAHERLVFEAMRKALHSKRLASQ 470
Query: 958 AYLDAEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLL 1017
L E + +PE L A + + G G+ I +
Sbjct: 471 VLLIPEI-VDIPEEDCDRLMLHAAEFAELGLAIERFGPGA----------------IAVR 513
Query: 1018 AVPCIFGVNLSDVDLLEFLQQLADT----DGSSTTPPSVLRVLNSKACRGAIMFGDSLLP 1073
P + G +VD ++QLAD D +S + V + AC G++ G L P
Sbjct: 514 ETPAMLG----EVDAHGLIRQLADEIAEWDTASGLSAKLEYVAATMACHGSVRSGRRLRP 569
Query: 1074 SECALIVEELKQTSLCFQCAHGRPTTVPL 1102
E ++ E++ T QC HGRPT + L
Sbjct: 570 EEMNALLREMEVTPGSGQCNHGRPTYIEL 598
>sp|C3KX34|MUTL_CLOB6 DNA mismatch repair protein MutL OS=Clostridium botulinum (strain 657
/ Type Ba4) GN=mutL PE=3 SV=1
Length = 666
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 94/217 (43%), Gaps = 37/217 (17%)
Query: 908 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLD------ 961
D K++ Q + +I + L +IDQHAA E++ E+ + ++ G S L
Sbjct: 477 DMKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVVSQILLSPVVIEL 536
Query: 962 AEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC 1021
+E E + E + +N ++ +G C I+ + VP
Sbjct: 537 SEDEFNIYEENKDIFKNSGFSVEAFGE-CTINIK----------------------EVPL 573
Query: 1022 IFGV-NLSD--VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECAL 1078
I G N+ + +D+L L+ + + S+ ++ + AC+ A+ D+L E
Sbjct: 574 ILGKPNVENLFMDILYNLKNMKSKETSTIKYNAIATL----ACKSAVKANDNLKEEEIKK 629
Query: 1079 IVEELKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1115
++E++ + + C HGRPT + L+ L K+ ++
Sbjct: 630 LIEDMLILNNPYTCPHGRPTMIKFT-LKDLEKKFKRI 665
>sp|Q6N1N4|MUTL_RHOPA DNA mismatch repair protein MutL OS=Rhodopseudomonas palustris
(strain ATCC BAA-98 / CGA009) GN=mutL PE=3 SV=1
Length = 595
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 73/175 (41%), Gaps = 17/175 (9%)
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 987
L VIDQHAA ERI E L+ L G L + + E + L AE++ +G
Sbjct: 426 LIVIDQHAAHERIVYERLKAS-LEANGVQRQILLIPDIVEMDEATVERLVARAEELAQFG 484
Query: 988 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1047
+ G+ + + P + G + L + + +A+ D +
Sbjct: 485 LVIESFGPGAVAVRET----------------PSLLGKTDASGLLRDLAEHMAEWDEALP 528
Query: 1048 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1102
++ V + AC G++ G L P E ++ E++ T QC HGRPT V L
Sbjct: 529 LERRLMHVAATMACHGSVRAGRVLKPEEMNALLREMEATPNSGQCNHGRPTYVEL 583
>sp|A3CWX7|MUTL_METMJ DNA mismatch repair protein MutL OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=mutL PE=3 SV=1
Length = 585
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 924 AGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEI------GYQLLQ 977
A GTL ++DQHAA ER+ +++ + G QEL+ P + L+
Sbjct: 414 ADGTLYLVDQHAAHERVLYDQVTEQRDKAAGS--------QELITPVVLSLPPKESAALR 465
Query: 978 NFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQ 1037
+ + D G++ + F ++ + AVP G + E +
Sbjct: 466 DAIPLLADEGFVVD-------EFGRD---------TFAVRAVPAALGAVEDPGTVRETIA 509
Query: 1038 QLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRP 1097
L D S T P RV ACRGA+ G L P + ++ +L +T + C HGRP
Sbjct: 510 DLL-ADESRTAPDRRERVTCIVACRGAVKAGALLTPDQQKRLIMQLARTKTPWTCPHGRP 568
Query: 1098 TTV 1100
T V
Sbjct: 569 TVV 571
>sp|A7GE44|MUTL_CLOBL DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=mutL PE=3 SV=1
Length = 666
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 98/213 (46%), Gaps = 29/213 (13%)
Query: 908 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVA--YLDAEQE 965
D K++ Q + +I + L +IDQHAA E++ E+ + ++ E + V L +
Sbjct: 477 DMKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEI---ENRYVISQILLSPVV 533
Query: 966 LVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGV 1025
+ L E + + + + K+ G+ ++ T G + N + VP I G
Sbjct: 534 IELSEDEFNIYEENKDIFKNSGF--SVETFGEYTIN--------------IKEVPLILGK 577
Query: 1026 -NLSD--VDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEE 1082
N+ + +D+L L+ + + S+ ++ + AC+ A+ D+L E ++E+
Sbjct: 578 PNVENLFMDILYNLKNMKSKETSTIKYNAIATL----ACKSAVKANDNLKEEEIKKLIED 633
Query: 1083 LKQTSLCFQCAHGRPTTVPLVNLEALHKQIAQL 1115
+ + + C HGRPT + L+ L K+ ++
Sbjct: 634 MLILNNPYTCPHGRPTMIKFT-LKDLEKKFKRI 665
>sp|Q8RA70|MUTL_THETN DNA mismatch repair protein MutL OS=Thermoanaerobacter tengcongensis
(strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
GN=mutL PE=3 SV=1
Length = 590
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Query: 902 NKSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLD 961
N L D +++ + ++ V G +IDQHAA ERI E+L + + + V +
Sbjct: 397 NVKRLSDIRIVGTLFSTYVIVEKGDVFYIIDQHAAHERILYEKLVSQYERVQSRQVTFPI 456
Query: 962 AEQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPC 1021
+ L +++ E + G++ F N + L VP
Sbjct: 457 VVE---LQPGDMEIVGQERELLYKLGYVFE-------EFGNN---------SVVLREVPV 497
Query: 1022 IFGVNLSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1081
I G + +E +++L D D SS + + AC+ A+ D+L +E + E
Sbjct: 498 ILGQPEAKKLFVEIVERLRDKDFSSKVSFKEEEI-ATMACKAAVKAMDTLSENEIYKLFE 556
Query: 1082 ELKQTSLCFQCAHGRPTTVPL--VNLEALHKQI 1112
+LK + C HGRP + + LE + K+I
Sbjct: 557 DLKIAENPYTCPHGRPVIISMTKTQLEKMFKRI 589
>sp|Q2ISE2|MUTL_RHOP2 DNA mismatch repair protein MutL OS=Rhodopseudomonas palustris
(strain HaA2) GN=mutL PE=3 SV=1
Length = 597
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 74/175 (42%), Gaps = 17/175 (9%)
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQLLQNFAEQIKDWG 987
L V+DQHAA ERI E L+ L+ G L + + E + L A+++ +G
Sbjct: 428 LIVVDQHAAHERIVYERLKAS-LAANGVQRQILLIPDIVEMDEATVERLVARADELAQFG 486
Query: 988 WICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLLEFLQQLADTDGSST 1047
+ G+ + + P + G + L + + +A+ D +
Sbjct: 487 LVVESFGPGAVAVRET----------------PSLLGKTDAASLLRDLAEHMAEWDEALP 530
Query: 1048 TPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTTVPL 1102
++ V + AC G++ G L P E ++ E++ T QC HGRPT V L
Sbjct: 531 LERRLMHVAATMACHGSVRAGRVLKPEEMNALLREMEATPNSGQCNHGRPTYVEL 585
>sp|B1H0C7|MUTL_UNCTG DNA mismatch repair protein MutL OS=Uncultured termite group 1
bacterium phylotype Rs-D17 GN=mutL PE=3 SV=1
Length = 595
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 908 DAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELV 967
+ KV+ QV +I G L + DQHAA ER+R E ++ S K Q+++
Sbjct: 408 NIKVIGQVFDTYIIASNKGDLYIFDQHAAAERVRYEFYLSQMKSQTIKI-------QQML 460
Query: 968 LPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNL 1027
+PE + L + +E +K I N F +N + A P + G N+
Sbjct: 461 MPE-NFDLSPSISELLKANINIFNELGISIEEFGQN---------SFRITAYPALLG-NI 509
Query: 1028 SDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1087
S +++ + + D + +++ S ACR +I GD++ E ++ +L +
Sbjct: 510 SMEQIVKTIISDIEDDKHAEIEQKRDKIIRS-ACRASIKAGDNVSFIEAKKLINDLFKCK 568
Query: 1088 LCFQCAHGRPTT--VPLVNLEALHKQ 1111
F C HGRPT + L +E K+
Sbjct: 569 QPFTCPHGRPTAYKISLNEIEKFFKR 594
>sp|Q9HSM6|MUTL_HALSA DNA mismatch repair protein MutL OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=mutL PE=3 SV=1
Length = 659
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 903 KSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDA 962
+ L D +VL Q+ ++ AG L ++DQHAADER+ E L+ +V +G S A + A
Sbjct: 455 RDSLPDLRVLGQLHDTYVVAEAGDGLVLVDQHAADERVHYERLQARV---DGASQALV-A 510
Query: 963 EQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCI 1022
EL L + + +++ G+ + + +R + AVP +
Sbjct: 511 PAELELTAGEAAVFEAALGGLRELGFDAELAGRTAR-----------------VTAVPAV 553
Query: 1023 FGVNLSDVDLLEFLQQ--LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1080
L D +L + LAD DG+ + VL AC AI SL ++
Sbjct: 554 LADAL-DAELARDVLSSFLADADGTPVA-DAADAVLADLACSPAIKGNTSLAEGSVVALL 611
Query: 1081 EELKQTSLCFQCAHGRPTTV 1100
+ L + C HGRPT V
Sbjct: 612 DALDACENPYACPHGRPTIV 631
>sp|B0R2S6|MUTL_HALS3 DNA mismatch repair protein MutL OS=Halobacterium salinarum (strain
ATCC 29341 / DSM 671 / R1) GN=mutL PE=3 SV=1
Length = 659
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 86/200 (43%), Gaps = 25/200 (12%)
Query: 903 KSCLEDAKVLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDA 962
+ L D +VL Q+ ++ AG L ++DQHAADER+ E L+ +V +G S A + A
Sbjct: 455 RDSLPDLRVLGQLHDTYVVAEAGDGLVLVDQHAADERVHYERLQARV---DGASQALV-A 510
Query: 963 EQELVLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCI 1022
EL L + + +++ G+ + + +R + AVP +
Sbjct: 511 PAELELTAGEAAVFEAALGGLRELGFDAELAGRTAR-----------------VTAVPAV 553
Query: 1023 FGVNLSDVDLLEFLQQ--LADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIV 1080
L D +L + LAD DG+ + VL AC AI SL ++
Sbjct: 554 LADAL-DAELARDVLSSFLADADGTPVA-DAADAVLADLACSPAIKGNTSLAEGSVVALL 611
Query: 1081 EELKQTSLCFQCAHGRPTTV 1100
+ L + C HGRPT V
Sbjct: 612 DALDACENPYACPHGRPTIV 631
>sp|Q2LUR5|MUTL_SYNAS DNA mismatch repair protein MutL OS=Syntrophus aciditrophicus (strain
SB) GN=mutL PE=3 SV=1
Length = 616
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 85/207 (41%), Gaps = 38/207 (18%)
Query: 916 DKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGYQL 975
D I VA G L +IDQHAA ERI E+++ + A Q L++PEI
Sbjct: 436 DSYLIFSVADGML-LIDQHAAHERILFEKIKKAAERNK-------TAVQVLLIPEI---- 483
Query: 976 LQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITV---------ITLLAVPCIFGVN 1026
N+ F + LL+ Q+ + I + A+P +
Sbjct: 484 --------------LNLSRPDFERFGDVVPLLE-QVGIEAEPFGGEEIIIKALPTLLAHL 528
Query: 1027 LSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1086
V + + + + AD G + ++ ACRGA+ G L+ E A + +L T
Sbjct: 529 DPGVLVKDLIAECADRGGGLSLQEKGEKIYAYLACRGAVKAGQKLIREEVAQLCRDLDAT 588
Query: 1087 SLCFQCAHGRPTTV--PLVNLEALHKQ 1111
C HGRP V PL ++E + ++
Sbjct: 589 PFAATCPHGRPVYVLYPLKDIERMFRR 615
>sp|Q9JYT2|MUTL_NEIMB DNA mismatch repair protein MutL OS=Neisseria meningitidis serogroup
B (strain MC58) GN=mutL PE=3 SV=1
Length = 658
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 90/209 (43%), Gaps = 36/209 (17%)
Query: 911 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLP 969
+ Q+ +I A +L +ID HAA ER+ E++ R + +G +S Q L++P
Sbjct: 470 AIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQS-------QRLLIP 522
Query: 970 EIGYQ------LLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIF 1023
L ++AE + +G L L + + AVP +
Sbjct: 523 VTFAASHEECAALADYAETLAGFG----------------LELSDMGGNTLAVRAVPAML 566
Query: 1024 GVNLSDVDLL--EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVE 1081
G +DV L + L +LA S T R+L + +C G+I G L E ++
Sbjct: 567 GK--ADVVSLAKDVLNELAQVGSSQTIEEHENRILATMSCHGSIRAGRRLTLPEMNALLR 624
Query: 1082 ELKQTSLCFQCAHGRPTTVPLV--NLEAL 1108
+++ T QC HGRPT V L L+AL
Sbjct: 625 DMENTPRSNQCNHGRPTWVKLTLKELDAL 653
>sp|Q1QIP3|MUTL_NITHX DNA mismatch repair protein MutL OS=Nitrobacter hamburgensis (strain
X14 / DSM 10229) GN=mutL PE=3 SV=1
Length = 603
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 81/189 (42%), Gaps = 17/189 (8%)
Query: 914 QVDKKFIPVVAGGTLAVIDQHAADERIRLEELRHKVLSGEGKSVAYLDAEQELVLPEIGY 973
Q+ + +I L V+DQHAA ERI E+L+ L +G Q L++P+I
Sbjct: 420 QIHETYIVTQTRDGLIVVDQHAAHERIVYEKLK-AALERDGVQ------RQILLIPDI-V 471
Query: 974 QLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSDVDLL 1033
+L + E++ D SF + + P + G + L
Sbjct: 472 ELDEATVEKLIDRAPELEKFGLAIESFGPG---------AVAVRETPSLLGKTNAAALLR 522
Query: 1034 EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCA 1093
+ + +A+ D + ++ V + AC G++ G L P E ++ E++ T QC
Sbjct: 523 DLAEHMAEWDEALPLERRLMHVAATMACHGSVRAGRILKPEEMNALLREMEDTPNSGQCN 582
Query: 1094 HGRPTTVPL 1102
HGRPT V L
Sbjct: 583 HGRPTYVEL 591
>sp|C4ZA52|MUTL_EUBR3 DNA mismatch repair protein MutL OS=Eubacterium rectale (strain ATCC
33656 / VPI 0990) GN=mutL PE=3 SV=1
Length = 648
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 34/187 (18%)
Query: 928 LAVIDQHAADERIRLEELRHKVLSGEGKS-------VAYLDAEQELVLPEIGYQLLQNFA 980
L +IDQHAA E++ E+ ++ + + S V LDA + ++L+ +
Sbjct: 479 LYIIDQHAAHEKVLYEKTMARLANKDFTSQRISPPIVMTLDARE--------CEMLEKYR 530
Query: 981 EQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVP-CIFGVNLSDVDLLEFLQQL 1039
QI+ +G+ + G + + + A+P +F +++ D+ +E L
Sbjct: 531 PQIEQFGY--EVEHFGGKEY--------------MISAIPDNLFNIDMKDL-FIEMLDDF 573
Query: 1040 ADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTSLCFQCAHGRPTT 1099
++ G T P + + S +C+ A+ D L E +++EL + C HGRPT
Sbjct: 574 SNATGRQT-PDIITEKVASMSCKAAVKGNDKLTLPEINKLIDELLSLDNPYNCPHGRPTI 632
Query: 1100 VPLVNLE 1106
+ + E
Sbjct: 633 ISMSKYE 639
>sp|B4RLX4|MUTL_NEIG2 DNA mismatch repair protein MutL OS=Neisseria gonorrhoeae (strain
NCCP11945) GN=mutL PE=3 SV=1
Length = 658
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 911 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLP 969
+ Q+ +I A +L +ID HAA ER+ E++ R + +G +S Q L++P
Sbjct: 470 AIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQS-------QHLLIP 522
Query: 970 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1029
FA ++ + + H + F L L + + A P + G SD
Sbjct: 523 -------VTFAASHEECAALAD-HAETLAGFG--LELSDMGGNTLAVRAAPVMLGK--SD 570
Query: 1030 VDLL--EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1087
V L + L +LA S T R+L + +C G+I G L E ++ +++ T
Sbjct: 571 VVSLARDVLGELAQVGSSQTIASHENRILATMSCHGSIRAGRRLTLPEMNALLRDMENTP 630
Query: 1088 LCFQCAHGRPTTVPLV 1103
QC HGRPT V L
Sbjct: 631 RSNQCNHGRPTWVKLT 646
>sp|Q5F8M6|MUTL_NEIG1 DNA mismatch repair protein MutL OS=Neisseria gonorrhoeae (strain
ATCC 700825 / FA 1090) GN=mutL PE=1 SV=1
Length = 658
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 22/196 (11%)
Query: 911 VLQQVDKKFIPVVAGGTLAVIDQHAADERIRLEEL-RHKVLSGEGKSVAYLDAEQELVLP 969
+ Q+ +I A +L +ID HAA ER+ E++ R + +G +S Q L++P
Sbjct: 470 AIAQLLGIYILAQAEDSLLLIDMHAAAERVNYEKMKRQRQENGNLQS-------QHLLIP 522
Query: 970 EIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVNLSD 1029
FA ++ + + H + F L L + + A P + G SD
Sbjct: 523 -------VTFAASHEECAALAD-HAETLAGFG--LELSDMGGNTLAVRAAPVMLGK--SD 570
Query: 1030 VDLL--EFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQTS 1087
V L + L +LA S T R+L + +C G+I G L E ++ +++ T
Sbjct: 571 VVSLARDVLGELAQVGSSQTIASHENRILATMSCHGSIRAGRRLTLPEMNALLRDMENTP 630
Query: 1088 LCFQCAHGRPTTVPLV 1103
QC HGRPT V L
Sbjct: 631 RSNQCNHGRPTWVKLT 646
>sp|Q0AYB2|MUTL_SYNWW DNA mismatch repair protein MutL OS=Syntrophomonas wolfei subsp.
wolfei (strain Goettingen) GN=mutL PE=3 SV=1
Length = 584
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 90/194 (46%), Gaps = 28/194 (14%)
Query: 910 KVLQQVDKKFIPVVAGGTLAVIDQHAADERI---RLEELRHKVLSGEGKSVAYLDAEQEL 966
K+L Q+ +I + TL ++DQHAA ERI RL++ + GE + +A+ +L
Sbjct: 403 KILGQLWDSYILLEKEQTLNIVDQHAAHERIIYSRLQQF-YAASRGEMQMLAF-PLLMDL 460
Query: 967 VLPEIGYQLLQNFAEQIKDWGWICNIHTQGSRSFNKNLNLLQRQITVITLLAVPCIFGVN 1026
L ++ +LL+ E + + G+ ++ G RS I L P I
Sbjct: 461 SLRDM--ELLEKNQEILGELGF--DLQQAGPRS--------------IFLRGTPAIIAGQ 502
Query: 1027 LSDVDLLEFLQQLADTDGSSTTPPSVLRVLNSKACRGAIMFGDSLLPSECALIVEELKQT 1086
+V L E L+ LA G + +++++ AC+ A+ G L E I++EL T
Sbjct: 503 EREV-LFEILELLAGGQGINLKNEAIIKM----ACKKAVKAGTRLDYREMMQIIQELFIT 557
Query: 1087 SLCFQCAHGRPTTV 1100
C HGRPT +
Sbjct: 558 DDYKNCPHGRPTII 571
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 451,383,556
Number of Sequences: 539616
Number of extensions: 20008160
Number of successful extensions: 44396
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 43934
Number of HSP's gapped (non-prelim): 383
length of query: 1145
length of database: 191,569,459
effective HSP length: 129
effective length of query: 1016
effective length of database: 121,958,995
effective search space: 123910338920
effective search space used: 123910338920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)