Query 001142
Match_columns 1142
No_of_seqs 1055 out of 4086
Neff 6.8
Searched_HMMs 46136
Date Thu Mar 28 16:57:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001142.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001142hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2.8E-59 6.1E-64 609.2 45.9 293 18-324 285-607 (968)
2 KOG0615 Serine/threonine prote 100.0 1.4E-45 3.1E-50 408.3 16.9 275 802-1136 166-444 (475)
3 KOG0581 Mitogen-activated prot 100.0 1.4E-44 3.1E-49 399.1 20.9 259 804-1136 76-342 (364)
4 KOG0575 Polo-like serine/threo 100.0 2.3E-43 5E-48 408.7 25.1 258 802-1133 14-273 (592)
5 KOG0591 NIMA (never in mitosis 100.0 4.5E-44 9.8E-49 379.1 14.7 266 802-1132 14-284 (375)
6 KOG0192 Tyrosine kinase specif 100.0 3.6E-42 7.7E-47 396.4 25.3 265 803-1135 37-305 (362)
7 KOG0595 Serine/threonine-prote 100.0 4.7E-42 1E-46 381.5 24.5 267 802-1134 5-273 (429)
8 KOG0598 Ribosomal protein S6 k 100.0 4.2E-42 9.1E-47 379.5 19.2 263 803-1137 21-289 (357)
9 KOG0593 Predicted protein kina 100.0 8.8E-42 1.9E-46 365.0 18.4 282 807-1133 2-288 (396)
10 KOG0661 MAPK related serine/th 100.0 4.4E-42 9.5E-47 386.4 15.2 287 806-1138 9-300 (538)
11 PF14381 EDR1: Ethylene-respon 100.0 3E-42 6.6E-47 362.4 12.6 184 521-765 4-200 (204)
12 KOG0582 Ste20-like serine/thre 100.0 1.6E-40 3.4E-45 371.4 25.3 276 803-1136 22-300 (516)
13 KOG0578 p21-activated serine/t 100.0 2.1E-41 4.5E-46 389.7 17.7 259 807-1139 273-533 (550)
14 KOG0592 3-phosphoinositide-dep 100.0 6.3E-41 1.4E-45 382.1 20.0 271 803-1136 69-345 (604)
15 KOG0659 Cdk activating kinase 100.0 5.4E-40 1.2E-44 346.8 20.8 289 807-1140 2-292 (318)
16 KOG0600 Cdc2-related protein k 100.0 2.5E-40 5.3E-45 374.7 19.2 295 798-1135 108-406 (560)
17 KOG0198 MEKK and related serin 100.0 4.5E-40 9.7E-45 369.0 18.6 264 806-1137 16-284 (313)
18 KOG0616 cAMP-dependent protein 100.0 4.1E-40 8.8E-45 352.1 16.9 260 803-1138 40-306 (355)
19 KOG0663 Protein kinase PITSLRE 100.0 7.2E-40 1.6E-44 354.5 17.5 290 803-1137 72-369 (419)
20 KOG0583 Serine/threonine prote 100.0 6.1E-39 1.3E-43 372.3 25.6 263 804-1134 14-280 (370)
21 KOG0597 Serine-threonine prote 100.0 1E-39 2.2E-44 370.9 17.7 256 807-1135 2-257 (808)
22 KOG0197 Tyrosine kinases [Sign 100.0 3.2E-39 7E-44 371.4 20.7 253 808-1133 207-461 (468)
23 KOG0033 Ca2+/calmodulin-depend 100.0 6.5E-41 1.4E-45 348.7 5.4 263 807-1137 11-275 (355)
24 KOG0605 NDR and related serine 100.0 4.7E-39 1E-43 367.6 20.7 272 805-1138 139-454 (550)
25 KOG0588 Serine/threonine prote 100.0 5E-39 1.1E-43 372.6 19.3 261 804-1137 9-271 (786)
26 KOG0585 Ca2+/calmodulin-depend 100.0 5.7E-39 1.2E-43 360.5 17.0 278 802-1135 92-378 (576)
27 KOG0201 Serine/threonine prote 100.0 1E-39 2.2E-44 365.3 9.8 255 808-1136 14-270 (467)
28 cd05612 STKc_PRKX_like Catalyt 100.0 3.1E-38 6.7E-43 355.9 21.9 253 807-1135 1-260 (291)
29 KOG0658 Glycogen synthase kina 100.0 1E-38 2.3E-43 351.9 16.6 283 808-1134 25-311 (364)
30 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.2E-37 2.6E-42 350.5 25.6 282 804-1132 2-288 (288)
31 KOG0193 Serine/threonine prote 100.0 1.2E-38 2.6E-43 367.3 17.4 267 803-1135 388-655 (678)
32 PTZ00263 protein kinase A cata 100.0 6.2E-38 1.4E-42 360.1 23.1 258 802-1135 13-277 (329)
33 KOG0694 Serine/threonine prote 100.0 2E-38 4.3E-43 371.2 18.3 259 803-1135 364-630 (694)
34 cd07848 STKc_CDKL5 Catalytic d 100.0 2.4E-37 5.2E-42 346.5 25.1 281 807-1132 1-287 (287)
35 KOG0599 Phosphorylase kinase g 100.0 1.7E-38 3.7E-43 334.7 13.9 267 806-1133 16-287 (411)
36 KOG0660 Mitogen-activated prot 100.0 7.7E-38 1.7E-42 344.4 19.6 290 809-1135 24-316 (359)
37 cd05571 STKc_PKB Catalytic dom 100.0 1.3E-37 2.8E-42 356.5 20.6 249 813-1134 1-256 (323)
38 cd07859 STKc_TDY_MAPK_plant Ca 100.0 7.3E-37 1.6E-41 350.7 26.8 292 808-1136 1-297 (338)
39 PTZ00426 cAMP-dependent protei 100.0 1.6E-37 3.4E-42 358.8 20.7 258 803-1136 26-291 (340)
40 KOG0594 Protein kinase PCTAIRE 100.0 3.1E-37 6.6E-42 341.0 21.4 299 806-1140 10-313 (323)
41 cd05631 STKc_GRK4 Catalytic do 100.0 3.3E-37 7.1E-42 346.3 21.6 261 808-1136 1-268 (285)
42 KOG0580 Serine/threonine prote 100.0 1.1E-37 2.4E-42 325.3 16.1 263 802-1135 17-279 (281)
43 PTZ00036 glycogen synthase kin 100.0 1E-36 2.2E-41 363.9 26.4 289 805-1134 64-356 (440)
44 cd07862 STKc_CDK6 Catalytic do 100.0 9.6E-37 2.1E-41 342.1 24.6 284 807-1132 1-290 (290)
45 cd06649 PKc_MEK2 Catalytic dom 100.0 2.3E-36 5E-41 347.3 27.6 281 806-1135 4-307 (331)
46 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.3E-36 2.9E-41 344.2 24.8 285 805-1136 3-295 (303)
47 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 5.7E-37 1.2E-41 352.3 21.8 260 807-1135 1-263 (333)
48 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.3E-36 2.9E-41 349.5 24.9 262 806-1133 6-334 (338)
49 cd05628 STKc_NDR1 Catalytic do 100.0 1.3E-36 2.8E-41 353.9 24.7 269 807-1135 1-299 (363)
50 KOG0589 Serine/threonine prote 100.0 1.8E-37 4E-42 356.1 17.1 258 806-1133 3-262 (426)
51 KOG0610 Putative serine/threon 100.0 5.8E-37 1.3E-41 340.8 19.8 275 804-1137 74-400 (459)
52 cd05599 STKc_NDR_like Catalyti 100.0 8.7E-37 1.9E-41 354.9 22.1 268 807-1135 1-302 (364)
53 cd05585 STKc_YPK1_like Catalyt 100.0 8.3E-37 1.8E-41 347.9 21.4 248 815-1135 1-253 (312)
54 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4E-36 8.6E-41 341.3 26.7 287 803-1135 2-292 (309)
55 cd05584 STKc_p70S6K Catalytic 100.0 1.1E-36 2.4E-41 348.7 21.4 250 813-1134 2-261 (323)
56 cd05593 STKc_PKB_gamma Catalyt 100.0 1.1E-36 2.4E-41 349.8 21.3 249 813-1134 1-256 (328)
57 cd05614 STKc_MSK2_N N-terminal 100.0 1.5E-36 3.3E-41 348.4 21.9 258 808-1135 1-273 (332)
58 cd05595 STKc_PKB_beta Catalyti 100.0 1.4E-36 2.9E-41 348.2 21.3 249 813-1134 1-256 (323)
59 KOG4721 Serine/threonine prote 100.0 9.4E-38 2E-42 354.1 11.1 248 805-1134 122-369 (904)
60 PHA02988 hypothetical protein; 100.0 6.8E-36 1.5E-40 336.0 26.2 252 813-1133 26-279 (283)
61 cd05629 STKc_NDR_like_fungal C 100.0 1.2E-36 2.6E-41 355.9 20.5 268 807-1135 1-311 (377)
62 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.3E-36 2.8E-41 350.9 20.2 267 807-1134 1-290 (350)
63 cd05596 STKc_ROCK Catalytic do 100.0 1.5E-36 3.2E-41 354.7 20.7 266 804-1135 40-310 (370)
64 cd05626 STKc_LATS2 Catalytic d 100.0 3.4E-36 7.5E-41 352.7 23.7 267 808-1134 2-310 (381)
65 cd05590 STKc_nPKC_eta Catalyti 100.0 2.2E-36 4.7E-41 346.1 21.4 249 813-1134 1-258 (320)
66 KOG0611 Predicted serine/threo 100.0 5.4E-37 1.2E-41 336.7 15.2 252 807-1133 53-307 (668)
67 cd05589 STKc_PKN Catalytic dom 100.0 3E-36 6.6E-41 345.1 22.1 252 809-1134 1-262 (324)
68 PTZ00283 serine/threonine prot 100.0 9.3E-36 2E-40 360.5 27.5 270 806-1134 31-302 (496)
69 cd05587 STKc_cPKC Catalytic do 100.0 3.9E-36 8.4E-41 344.2 22.7 254 808-1134 1-262 (324)
70 cd05048 PTKc_Ror Catalytic Dom 100.0 9.1E-36 2E-40 332.7 25.0 260 805-1131 3-281 (283)
71 cd05591 STKc_nPKC_epsilon Cata 100.0 3E-36 6.5E-41 344.7 21.5 249 813-1134 1-259 (321)
72 KOG0032 Ca2+/calmodulin-depend 100.0 4.8E-36 1.1E-40 348.3 23.2 262 807-1135 35-299 (382)
73 cd05594 STKc_PKB_alpha Catalyt 100.0 1.7E-36 3.8E-41 347.3 19.1 250 813-1135 1-258 (325)
74 KOG0579 Ste20-like serine/thre 100.0 3.2E-37 7E-42 351.8 12.8 260 808-1135 33-295 (1187)
75 cd05598 STKc_LATS Catalytic do 100.0 2.1E-36 4.4E-41 353.6 19.9 267 807-1134 1-306 (376)
76 KOG0667 Dual-specificity tyros 100.0 2.2E-36 4.8E-41 354.5 20.0 279 808-1135 187-508 (586)
77 cd05621 STKc_ROCK2 Catalytic d 100.0 2.9E-36 6.2E-41 352.3 20.8 264 806-1135 42-310 (370)
78 cd05592 STKc_nPKC_theta_delta 100.0 4.7E-36 1E-40 342.6 22.1 249 813-1134 1-253 (316)
79 cd05620 STKc_nPKC_delta Cataly 100.0 4.4E-36 9.6E-41 342.9 21.7 250 813-1135 1-254 (316)
80 cd07876 STKc_JNK2 Catalytic do 100.0 1.3E-35 2.9E-40 344.7 25.9 285 805-1134 19-320 (359)
81 PTZ00267 NIMA-related protein 100.0 1.5E-35 3.3E-40 357.6 27.3 258 807-1133 67-327 (478)
82 PLN00034 mitogen-activated pro 100.0 7.6E-36 1.6E-40 346.0 23.7 261 803-1137 70-336 (353)
83 cd07874 STKc_JNK3 Catalytic do 100.0 1.1E-35 2.5E-40 344.5 25.2 286 805-1134 15-316 (355)
84 cd07875 STKc_JNK1 Catalytic do 100.0 2E-35 4.3E-40 343.9 27.1 286 805-1134 22-323 (364)
85 cd07853 STKc_NLK Catalytic dom 100.0 9.3E-36 2E-40 347.8 24.4 286 808-1134 1-293 (372)
86 cd05575 STKc_SGK Catalytic dom 100.0 3.7E-36 8.1E-41 344.2 20.5 249 813-1134 1-256 (323)
87 cd05616 STKc_cPKC_beta Catalyt 100.0 6.3E-36 1.4E-40 342.4 22.2 254 808-1134 1-262 (323)
88 cd08529 STKc_FA2-like Catalyti 100.0 2.3E-35 5.1E-40 323.6 25.7 253 808-1131 1-255 (256)
89 cd06650 PKc_MEK1 Catalytic dom 100.0 2E-35 4.3E-40 340.1 26.3 280 807-1135 5-305 (333)
90 cd05096 PTKc_DDR1 Catalytic do 100.0 2E-35 4.4E-40 334.4 25.8 265 807-1131 5-303 (304)
91 cd05625 STKc_LATS1 Catalytic d 100.0 6.6E-36 1.4E-40 350.3 22.4 267 808-1135 2-311 (382)
92 KOG1187 Serine/threonine prote 100.0 5.8E-36 1.2E-40 346.7 21.3 264 807-1133 75-352 (361)
93 cd05619 STKc_nPKC_theta Cataly 100.0 8.4E-36 1.8E-40 340.7 22.4 250 813-1135 1-254 (316)
94 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.4E-35 7.3E-40 326.3 26.4 254 806-1131 4-263 (266)
95 cd05601 STKc_CRIK Catalytic do 100.0 3.5E-36 7.7E-41 345.1 19.2 263 807-1134 1-268 (330)
96 cd07863 STKc_CDK4 Catalytic do 100.0 1.5E-35 3.2E-40 331.9 23.6 282 808-1132 1-288 (288)
97 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.2E-35 4.8E-40 333.7 25.0 284 803-1134 2-291 (301)
98 PHA03212 serine/threonine kina 100.0 4E-35 8.6E-40 345.2 27.7 276 806-1135 91-382 (391)
99 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.4E-35 2.9E-40 342.1 23.2 285 807-1135 15-304 (343)
100 cd05622 STKc_ROCK1 Catalytic d 100.0 1.1E-35 2.5E-40 347.4 22.0 265 805-1135 41-310 (371)
101 cd05608 STKc_GRK1 Catalytic do 100.0 1.5E-35 3.1E-40 332.2 22.0 256 815-1136 1-264 (280)
102 cd05570 STKc_PKC Catalytic dom 100.0 1.3E-35 2.9E-40 339.1 21.9 250 813-1135 1-258 (318)
103 cd05627 STKc_NDR2 Catalytic do 100.0 8.6E-36 1.9E-40 346.5 20.5 268 807-1135 1-299 (360)
104 cd05582 STKc_RSK_N N-terminal 100.0 3.4E-36 7.4E-41 343.6 16.9 248 813-1134 2-259 (318)
105 KOG4279 Serine/threonine prote 100.0 2.5E-36 5.5E-41 347.8 15.5 256 813-1135 581-838 (1226)
106 cd05602 STKc_SGK1 Catalytic do 100.0 9.5E-36 2.1E-40 341.2 20.1 249 813-1134 1-256 (325)
107 cd05605 STKc_GRK4_like Catalyt 100.0 1.4E-35 3.1E-40 333.1 21.1 260 808-1135 1-267 (285)
108 cd05114 PTKc_Tec_Rlk Catalytic 100.0 5.5E-35 1.2E-39 321.9 25.3 251 806-1130 3-255 (256)
109 cd05615 STKc_cPKC_alpha Cataly 100.0 3.1E-35 6.7E-40 337.0 23.5 255 808-1135 1-263 (323)
110 cd05604 STKc_SGK3 Catalytic do 100.0 8.7E-36 1.9E-40 341.5 18.9 249 813-1134 1-256 (325)
111 KOG0577 Serine/threonine prote 100.0 3.4E-36 7.4E-41 342.5 15.1 258 809-1137 28-286 (948)
112 cd05104 PTKc_Kit Catalytic dom 100.0 4.1E-35 8.8E-40 343.2 24.7 260 806-1132 34-373 (375)
113 cd05075 PTKc_Axl Catalytic dom 100.0 1.4E-34 3E-39 321.0 27.5 264 809-1132 1-270 (272)
114 KOG1026 Nerve growth factor re 100.0 7.9E-36 1.7E-40 358.0 18.5 268 803-1135 482-764 (774)
115 cd05603 STKc_SGK2 Catalytic do 100.0 1.4E-35 3E-40 339.1 19.8 248 813-1133 1-255 (321)
116 cd08223 STKc_Nek4 Catalytic do 100.0 1.1E-34 2.4E-39 318.7 26.2 255 808-1132 1-257 (257)
117 cd05588 STKc_aPKC Catalytic do 100.0 2E-35 4.3E-40 339.4 20.9 249 813-1134 1-267 (329)
118 cd08227 PK_STRAD_alpha Pseudok 100.0 6.9E-35 1.5E-39 334.2 25.1 290 811-1135 2-313 (327)
119 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.1E-34 2.3E-39 321.0 25.8 264 808-1132 1-267 (267)
120 KOG0574 STE20-like serine/thre 100.0 3.8E-37 8.2E-42 327.4 5.6 258 809-1138 35-292 (502)
121 cd05106 PTKc_CSF-1R Catalytic 100.0 4.6E-35 1E-39 342.7 23.8 261 805-1132 36-371 (374)
122 cd05072 PTKc_Lyn Catalytic dom 100.0 1.1E-34 2.5E-39 320.0 25.6 254 805-1131 4-259 (261)
123 cd05088 PTKc_Tie2 Catalytic do 100.0 1.1E-34 2.4E-39 329.0 25.9 262 804-1133 4-280 (303)
124 cd05618 STKc_aPKC_iota Catalyt 100.0 2.9E-35 6.2E-40 338.2 21.2 250 813-1135 1-268 (329)
125 cd05090 PTKc_Ror1 Catalytic do 100.0 1.3E-34 2.9E-39 323.9 26.0 261 805-1132 3-282 (283)
126 cd05052 PTKc_Abl Catalytic dom 100.0 1.8E-34 4E-39 319.3 26.6 254 806-1132 5-261 (263)
127 cd05116 PTKc_Syk Catalytic dom 100.0 1.9E-34 4.1E-39 318.1 26.5 247 814-1131 2-253 (257)
128 cd07868 STKc_CDK8 Catalytic do 100.0 9.3E-35 2E-39 330.8 24.8 285 812-1132 6-317 (317)
129 KOG4717 Serine/threonine prote 100.0 1.6E-35 3.4E-40 332.7 17.6 256 808-1135 19-276 (864)
130 cd05586 STKc_Sck1_like Catalyt 100.0 1.3E-35 2.9E-40 340.5 17.6 249 815-1134 1-258 (330)
131 PF07714 Pkinase_Tyr: Protein 100.0 5.6E-35 1.2E-39 323.9 21.8 251 810-1130 2-259 (259)
132 PTZ00284 protein kinase; Provi 100.0 1.1E-34 2.3E-39 349.3 26.0 284 806-1135 128-444 (467)
133 cd05036 PTKc_ALK_LTK Catalytic 100.0 2.3E-34 5.1E-39 321.2 26.9 264 806-1131 5-276 (277)
134 cd06611 STKc_SLK_like Catalyti 100.0 7.7E-35 1.7E-39 325.1 23.0 262 806-1135 4-268 (280)
135 cd05062 PTKc_IGF-1R Catalytic 100.0 1.7E-34 3.8E-39 322.0 25.7 258 807-1131 6-276 (277)
136 cd06625 STKc_MEKK3_like Cataly 100.0 1.4E-34 3E-39 319.1 24.5 259 807-1132 2-263 (263)
137 PTZ00266 NIMA-related protein 100.0 1.7E-34 3.7E-39 361.5 28.2 273 803-1135 9-301 (1021)
138 PF00069 Pkinase: Protein kina 100.0 3.8E-35 8.2E-40 322.3 19.7 258 809-1132 1-260 (260)
139 cd05049 PTKc_Trk Catalytic dom 100.0 1.5E-34 3.2E-39 322.1 24.7 259 806-1131 4-279 (280)
140 cd05093 PTKc_TrkB Catalytic do 100.0 2.9E-34 6.3E-39 322.5 27.1 262 806-1135 4-281 (288)
141 cd07861 STKc_CDK1_euk Catalyti 100.0 1.2E-34 2.6E-39 323.7 23.9 280 808-1132 1-285 (285)
142 cd08217 STKc_Nek2 Catalytic do 100.0 2.4E-34 5.2E-39 316.0 25.7 258 808-1132 1-265 (265)
143 cd05033 PTKc_EphR Catalytic do 100.0 2.8E-34 6E-39 318.1 26.4 256 806-1132 3-264 (266)
144 cd05035 PTKc_Axl_like Catalyti 100.0 3.4E-34 7.4E-39 317.4 27.0 264 809-1132 1-271 (273)
145 cd05082 PTKc_Csk Catalytic dom 100.0 2.7E-34 5.9E-39 316.4 26.0 249 806-1131 5-254 (256)
146 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.2E-34 4.7E-39 318.0 25.2 251 806-1130 3-255 (256)
147 cd06637 STKc_TNIK Catalytic do 100.0 1.5E-34 3.2E-39 320.7 24.0 262 808-1132 7-272 (272)
148 KOG0584 Serine/threonine prote 100.0 1.3E-35 2.7E-40 344.8 15.9 255 810-1135 43-302 (632)
149 cd05108 PTKc_EGFR Catalytic do 100.0 2.8E-34 6.1E-39 327.3 26.8 257 806-1134 6-269 (316)
150 cd08219 STKc_Nek3 Catalytic do 100.0 2.5E-34 5.5E-39 316.2 25.4 250 808-1129 1-252 (255)
151 cd08228 STKc_Nek6 Catalytic do 100.0 3.2E-34 6.8E-39 317.3 26.3 260 806-1132 1-264 (267)
152 cd07839 STKc_CDK5 Catalytic do 100.0 1.1E-34 2.4E-39 324.1 22.9 280 808-1132 1-284 (284)
153 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-34 2.7E-39 324.1 23.2 252 815-1134 1-259 (277)
154 cd06643 STKc_SLK Catalytic dom 100.0 1.7E-34 3.6E-39 323.0 24.2 263 809-1137 7-270 (282)
155 cd08220 STKc_Nek8 Catalytic do 100.0 1.9E-34 4.1E-39 316.4 24.0 254 808-1132 1-256 (256)
156 cd05089 PTKc_Tie1 Catalytic do 100.0 3.9E-34 8.5E-39 323.1 27.1 258 806-1133 1-275 (297)
157 cd06654 STKc_PAK1 Catalytic do 100.0 2.6E-34 5.6E-39 324.8 25.6 259 806-1138 19-279 (296)
158 cd05094 PTKc_TrkC Catalytic do 100.0 3.9E-34 8.4E-39 322.0 26.7 263 806-1136 4-285 (291)
159 cd08218 STKc_Nek1 Catalytic do 100.0 1.9E-34 4E-39 317.1 23.5 254 808-1132 1-256 (256)
160 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.2E-34 4.8E-39 317.4 24.1 252 807-1131 6-259 (261)
161 cd06646 STKc_MAP4K5 Catalytic 100.0 9.6E-35 2.1E-39 321.7 21.0 258 806-1131 8-267 (267)
162 cd07841 STKc_CDK7 Catalytic do 100.0 3.8E-34 8.3E-39 322.4 26.0 289 808-1138 1-291 (298)
163 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-34 2.3E-39 333.7 21.9 265 807-1134 1-271 (331)
164 cd08221 STKc_Nek9 Catalytic do 100.0 4.3E-34 9.3E-39 314.2 25.7 254 808-1132 1-256 (256)
165 cd05632 STKc_GRK5 Catalytic do 100.0 1.9E-34 4.2E-39 323.9 23.4 259 809-1135 2-267 (285)
166 cd05091 PTKc_Ror2 Catalytic do 100.0 2.2E-34 4.9E-39 321.8 23.3 259 806-1131 4-281 (283)
167 cd05059 PTKc_Tec_like Catalyti 100.0 3.2E-34 7E-39 316.1 24.2 251 806-1130 3-255 (256)
168 cd05045 PTKc_RET Catalytic dom 100.0 5.4E-34 1.2E-38 320.4 26.5 259 808-1133 1-286 (290)
169 cd06631 STKc_YSK4 Catalytic do 100.0 3.4E-34 7.4E-39 316.9 24.1 264 808-1132 1-265 (265)
170 cd06655 STKc_PAK2 Catalytic do 100.0 4.4E-34 9.6E-39 323.1 25.3 259 806-1138 18-278 (296)
171 cd06609 STKc_MST3_like Catalyt 100.0 3.3E-34 7.2E-39 318.9 23.9 256 807-1136 1-258 (274)
172 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.7E-34 1E-38 318.8 25.2 281 807-1132 1-286 (286)
173 cd05109 PTKc_HER2 Catalytic do 100.0 8.8E-34 1.9E-38 316.6 27.3 258 805-1134 5-269 (279)
174 cd06656 STKc_PAK3 Catalytic do 100.0 2.4E-34 5.1E-39 325.3 23.0 258 807-1138 19-278 (297)
175 cd05111 PTK_HER3 Pseudokinase 100.0 8.6E-34 1.9E-38 317.4 27.2 256 806-1133 6-268 (279)
176 cd05623 STKc_MRCK_alpha Cataly 100.0 8.8E-35 1.9E-39 334.3 19.6 265 807-1134 1-271 (332)
177 cd05039 PTKc_Csk_like Catalyti 100.0 7.7E-34 1.7E-38 312.5 26.2 249 806-1131 5-254 (256)
178 cd05032 PTKc_InsR_like Catalyt 100.0 6E-34 1.3E-38 316.7 25.6 259 806-1131 5-276 (277)
179 cd06608 STKc_myosinIII_like Ca 100.0 4.1E-34 8.8E-39 316.4 24.0 269 804-1132 3-275 (275)
180 KOG1989 ARK protein kinase fam 100.0 6.9E-35 1.5E-39 351.6 19.2 268 808-1136 38-314 (738)
181 cd05630 STKc_GRK6 Catalytic do 100.0 2E-34 4.4E-39 323.9 21.6 259 808-1134 1-266 (285)
182 cd06638 STKc_myosinIIIA Cataly 100.0 5.2E-34 1.1E-38 319.1 24.7 268 804-1132 15-286 (286)
183 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.4E-34 3.1E-39 332.0 20.7 250 813-1135 1-266 (327)
184 cd06619 PKc_MKK5 Catalytic dom 100.0 2.9E-34 6.2E-39 321.1 22.6 251 807-1136 1-260 (279)
185 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.4E-34 9.5E-39 315.1 23.7 265 807-1132 1-267 (267)
186 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.7E-34 7.9E-39 319.9 23.3 263 807-1132 16-282 (282)
187 cd07837 STKc_CdkB_plant Cataly 100.0 4.8E-34 1E-38 320.8 24.4 291 807-1133 1-295 (295)
188 cd06613 STKc_MAP4K3_like Catal 100.0 7.2E-34 1.6E-38 312.9 25.3 258 807-1131 3-262 (262)
189 KOG1095 Protein tyrosine kinas 100.0 2.5E-34 5.4E-39 356.2 24.0 268 802-1134 687-962 (1025)
190 cd06644 STKc_STK10_LOK Catalyt 100.0 5E-34 1.1E-38 321.0 24.4 261 807-1135 12-275 (292)
191 cd05068 PTKc_Frk_like Catalyti 100.0 7.3E-34 1.6E-38 313.9 25.2 252 807-1131 6-259 (261)
192 cd05054 PTKc_VEGFR Catalytic d 100.0 3.9E-34 8.4E-39 330.1 24.0 261 807-1133 7-333 (337)
193 cd06615 PKc_MEK Catalytic doma 100.0 5.1E-34 1.1E-38 324.2 24.6 279 807-1135 1-293 (308)
194 cd05053 PTKc_FGFR Catalytic do 100.0 6.9E-34 1.5E-38 319.5 25.3 261 806-1133 11-291 (293)
195 cd07832 STKc_CCRK Catalytic do 100.0 9E-34 2E-38 316.5 26.0 281 808-1132 1-285 (286)
196 cd06645 STKc_MAP4K3 Catalytic 100.0 2E-34 4.4E-39 319.1 20.5 258 806-1131 8-267 (267)
197 cd05624 STKc_MRCK_beta Catalyt 100.0 1.3E-34 2.8E-39 333.0 19.7 265 807-1134 1-271 (331)
198 cd06612 STKc_MST1_2 Catalytic 100.0 4.7E-34 1E-38 313.2 23.1 253 806-1132 2-256 (256)
199 PHA03209 serine/threonine kina 100.0 2E-34 4.3E-39 335.0 21.1 271 807-1134 66-356 (357)
200 cd05042 PTKc_Aatyk Catalytic d 100.0 9.3E-34 2E-38 314.5 25.5 259 813-1130 1-267 (269)
201 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-33 2.4E-38 310.5 25.8 248 813-1131 1-251 (252)
202 cd06640 STKc_MST4 Catalytic do 100.0 1E-33 2.2E-38 316.0 25.7 253 808-1135 5-259 (277)
203 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.3E-33 2.8E-38 311.8 26.1 252 806-1131 5-258 (260)
204 cd05098 PTKc_FGFR1 Catalytic d 100.0 9.3E-34 2E-38 321.6 25.7 263 806-1135 17-301 (307)
205 PHA03207 serine/threonine kina 100.0 3.5E-34 7.6E-39 337.2 23.0 278 807-1136 92-382 (392)
206 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.3E-34 2E-38 334.3 26.3 261 806-1133 36-397 (400)
207 cd05083 PTKc_Chk Catalytic dom 100.0 9E-34 2E-38 311.9 24.4 247 806-1131 5-252 (254)
208 cd08229 STKc_Nek7 Catalytic do 100.0 8.8E-34 1.9E-38 313.7 24.4 260 806-1132 1-264 (267)
209 cd06651 STKc_MEKK3 Catalytic d 100.0 1.1E-33 2.4E-38 313.5 25.2 259 808-1133 3-265 (266)
210 cd05071 PTKc_Src Catalytic dom 100.0 1.5E-33 3.3E-38 312.3 26.2 251 807-1131 6-258 (262)
211 PHA03211 serine/threonine kina 100.0 7.3E-34 1.6E-38 339.9 25.4 276 807-1134 169-460 (461)
212 cd05060 PTKc_Syk_like Catalyti 100.0 1.6E-33 3.4E-38 310.6 26.1 249 813-1133 1-255 (257)
213 KOG0194 Protein tyrosine kinas 100.0 2.3E-34 5.1E-39 336.2 20.4 257 808-1135 158-422 (474)
214 cd05574 STKc_phototropin_like 100.0 1.3E-33 2.8E-38 321.2 26.0 270 807-1135 1-295 (316)
215 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.7E-33 3.7E-38 312.7 26.2 259 813-1130 1-267 (269)
216 cd06658 STKc_PAK5 Catalytic do 100.0 5.7E-34 1.2E-38 321.6 22.8 259 808-1140 23-283 (292)
217 cd05061 PTKc_InsR Catalytic do 100.0 2.9E-33 6.2E-38 314.5 28.2 263 806-1135 5-280 (288)
218 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.6E-34 1.2E-38 317.9 22.3 252 808-1134 5-258 (277)
219 cd08225 STKc_Nek5 Catalytic do 100.0 7.6E-34 1.7E-38 311.7 23.0 255 808-1132 1-257 (257)
220 cd05051 PTKc_DDR Catalytic dom 100.0 1.2E-33 2.7E-38 317.6 25.2 266 806-1131 4-295 (296)
221 cd06617 PKc_MKK3_6 Catalytic d 100.0 9.6E-34 2.1E-38 316.1 24.0 263 807-1136 1-268 (283)
222 cd06652 STKc_MEKK2 Catalytic d 100.0 1.8E-33 3.9E-38 311.5 26.0 259 807-1132 2-264 (265)
223 cd07845 STKc_CDK10 Catalytic d 100.0 1.6E-33 3.5E-38 319.6 26.0 288 805-1135 5-296 (309)
224 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.3E-33 7.1E-38 308.5 27.3 260 807-1133 2-265 (267)
225 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.6E-33 3.4E-38 319.0 25.3 262 806-1134 14-297 (304)
226 cd07867 STKc_CDC2L6 Catalytic 100.0 1.2E-33 2.5E-38 321.3 24.3 284 812-1132 6-317 (317)
227 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.8E-33 3.9E-38 320.4 25.9 262 806-1134 11-294 (314)
228 cd05580 STKc_PKA Catalytic dom 100.0 1.3E-33 2.8E-38 317.6 24.3 254 807-1136 1-261 (290)
229 cd05066 PTKc_EphR_A Catalytic 100.0 2.6E-33 5.7E-38 310.8 26.5 257 806-1132 3-265 (267)
230 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.2E-33 2.5E-38 316.5 23.8 260 807-1135 1-268 (286)
231 cd07850 STKc_JNK Catalytic dom 100.0 2.5E-33 5.4E-38 324.9 27.2 285 806-1134 15-316 (353)
232 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.8E-33 3.8E-38 310.7 24.7 251 807-1131 6-258 (260)
233 cd00192 PTKc Catalytic domain 100.0 2.6E-33 5.6E-38 307.0 25.8 251 813-1130 1-261 (262)
234 cd06630 STKc_MEKK1 Catalytic d 100.0 9.3E-34 2E-38 313.4 22.3 266 808-1133 1-268 (268)
235 cd05050 PTKc_Musk Catalytic do 100.0 2.7E-33 5.9E-38 314.2 26.3 259 806-1131 4-287 (288)
236 cd05115 PTKc_Zap-70 Catalytic 100.0 3.3E-33 7.1E-38 309.0 26.5 248 814-1132 2-254 (257)
237 cd06639 STKc_myosinIIIB Cataly 100.0 2.3E-33 4.9E-38 315.3 25.5 267 806-1133 21-291 (291)
238 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-33 2.3E-38 316.2 22.8 278 808-1132 1-284 (284)
239 cd07846 STKc_CDKL2_3 Catalytic 100.0 9.5E-34 2E-38 316.7 22.3 281 807-1132 1-286 (286)
240 cd05069 PTKc_Yes Catalytic dom 100.0 3.3E-33 7.2E-38 308.7 26.4 251 807-1131 6-258 (260)
241 cd05092 PTKc_TrkA Catalytic do 100.0 2.8E-33 6E-38 313.3 26.0 258 806-1131 4-279 (280)
242 cd07843 STKc_CDC2L1 Catalytic 100.0 1E-33 2.2E-38 318.4 22.4 285 805-1132 3-293 (293)
243 cd06917 STKc_NAK1_like Catalyt 100.0 1.3E-33 2.9E-38 314.3 23.1 257 808-1137 2-263 (277)
244 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1E-33 2.2E-38 317.3 22.2 255 806-1135 4-272 (284)
245 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.8E-33 3.8E-38 312.5 23.9 266 808-1132 2-272 (272)
246 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 3.6E-33 7.7E-38 312.4 26.5 271 808-1133 4-281 (283)
247 cd05065 PTKc_EphR_B Catalytic 100.0 3.4E-33 7.3E-38 310.0 26.0 259 806-1132 3-267 (269)
248 cd05112 PTKc_Itk Catalytic dom 100.0 3.1E-33 6.7E-38 307.4 25.2 251 806-1130 3-255 (256)
249 cd05085 PTKc_Fer Catalytic dom 100.0 5.5E-33 1.2E-37 304.3 27.1 247 813-1131 1-249 (250)
250 KOG0596 Dual specificity; seri 100.0 2.1E-34 4.5E-39 328.5 16.2 263 807-1134 361-632 (677)
251 cd07865 STKc_CDK9 Catalytic do 100.0 3.1E-33 6.7E-38 315.9 25.7 295 805-1132 10-310 (310)
252 cd05047 PTKc_Tie Catalytic dom 100.0 4.1E-33 9E-38 310.0 26.3 252 813-1132 1-267 (270)
253 KOG4645 MAPKKK (MAP kinase kin 100.0 2.2E-35 4.7E-40 362.0 8.6 265 808-1138 1236-1503(1509)
254 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.2E-33 6.9E-38 312.4 25.3 245 814-1130 2-273 (274)
255 cd07844 STKc_PCTAIRE_like Cata 100.0 3.1E-33 6.7E-38 313.9 25.3 282 804-1132 2-291 (291)
256 cd05056 PTKc_FAK Catalytic dom 100.0 4.7E-33 1E-37 309.0 26.4 254 807-1133 6-265 (270)
257 cd05034 PTKc_Src_like Catalyti 100.0 4.2E-33 9E-38 307.3 25.7 254 805-1131 4-259 (261)
258 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 7.1E-33 1.5E-37 311.1 27.9 267 807-1137 1-274 (287)
259 cd05043 PTK_Ryk Pseudokinase d 100.0 5.3E-33 1.1E-37 310.3 26.4 262 806-1133 5-276 (280)
260 cd05073 PTKc_Hck Catalytic dom 100.0 6.4E-33 1.4E-37 306.5 26.5 252 806-1131 5-258 (260)
261 cd05100 PTKc_FGFR3 Catalytic d 100.0 4.3E-33 9.3E-38 320.3 26.0 260 808-1134 13-294 (334)
262 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.9E-33 1.7E-37 306.6 27.2 256 807-1132 5-266 (268)
263 cd07866 STKc_BUR1 Catalytic do 100.0 3.1E-33 6.8E-38 316.0 24.4 300 805-1132 6-311 (311)
264 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.3E-33 1.2E-37 308.4 25.7 246 813-1130 1-261 (262)
265 cd07842 STKc_CDK8_like Catalyt 100.0 3.9E-33 8.4E-38 316.3 25.0 294 808-1132 1-316 (316)
266 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.6E-33 7.8E-38 322.5 25.0 262 806-1133 6-339 (343)
267 cd06632 STKc_MEKK1_plant Catal 100.0 4.6E-33 1E-37 305.4 24.6 254 808-1132 1-258 (258)
268 cd07849 STKc_ERK1_2_like Catal 100.0 4.4E-33 9.5E-38 320.5 25.5 290 807-1136 5-299 (336)
269 cd05609 STKc_MAST Catalytic do 100.0 4.9E-33 1.1E-37 315.4 25.4 269 807-1135 1-279 (305)
270 PLN00009 cyclin-dependent kina 100.0 7.5E-33 1.6E-37 311.5 26.7 286 806-1135 1-290 (294)
271 KOG0986 G protein-coupled rece 100.0 6E-35 1.3E-39 326.0 9.5 347 708-1136 99-453 (591)
272 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.2E-33 9.1E-38 328.7 25.7 260 806-1132 36-398 (401)
273 cd06647 STKc_PAK_I Catalytic d 100.0 2.5E-33 5.5E-38 316.3 22.8 260 806-1139 18-279 (293)
274 cd05058 PTKc_Met_Ron Catalytic 100.0 1.2E-32 2.6E-37 303.9 27.6 253 813-1133 1-259 (262)
275 PHA03210 serine/threonine kina 100.0 1.1E-33 2.3E-38 343.3 21.1 292 806-1135 147-460 (501)
276 cd05097 PTKc_DDR_like Catalyti 100.0 4.8E-33 1E-37 313.7 25.0 267 805-1131 3-294 (295)
277 cd05055 PTKc_PDGFR Catalytic d 100.0 7.1E-33 1.5E-37 314.2 26.5 259 804-1132 32-300 (302)
278 cd05086 PTKc_Aatyk2 Catalytic 100.0 7.4E-33 1.6E-37 307.8 25.8 261 813-1131 1-267 (268)
279 cd07833 STKc_CDKL Catalytic do 100.0 3.9E-33 8.6E-38 311.7 23.6 282 807-1132 1-288 (288)
280 cd06605 PKc_MAPKK Catalytic do 100.0 2.4E-33 5.3E-38 309.5 21.6 254 807-1134 1-262 (265)
281 cd06626 STKc_MEKK4 Catalytic d 100.0 6E-33 1.3E-37 305.9 24.5 261 808-1132 1-264 (264)
282 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 8.6E-33 1.9E-37 309.2 26.0 272 807-1132 4-282 (284)
283 cd05057 PTKc_EGFR_like Catalyt 100.0 1.2E-32 2.5E-37 307.6 26.7 257 805-1133 5-268 (279)
284 cd06623 PKc_MAPKK_plant_like C 100.0 8E-33 1.7E-37 304.5 25.1 255 807-1135 1-262 (264)
285 cd06659 STKc_PAK6 Catalytic do 100.0 3.9E-33 8.5E-38 315.5 22.7 254 809-1136 23-278 (297)
286 cd08215 STKc_Nek Catalytic dom 100.0 8E-33 1.7E-37 302.4 24.3 256 808-1132 1-258 (258)
287 cd06641 STKc_MST3 Catalytic do 100.0 7.6E-33 1.6E-37 309.0 24.6 252 809-1135 6-259 (277)
288 cd07831 STKc_MOK Catalytic dom 100.0 1.1E-32 2.3E-37 307.2 25.8 278 809-1132 1-282 (282)
289 cd05044 PTKc_c-ros Catalytic d 100.0 6.9E-33 1.5E-37 306.9 24.0 257 813-1131 1-268 (269)
290 cd06607 STKc_TAO Catalytic dom 100.0 9.4E-33 2E-37 313.4 25.5 258 807-1136 15-274 (307)
291 cd06624 STKc_ASK Catalytic dom 100.0 9.7E-33 2.1E-37 306.1 25.0 252 810-1132 11-268 (268)
292 cd06648 STKc_PAK_II Catalytic 100.0 8.8E-33 1.9E-37 310.5 24.9 255 808-1136 20-276 (285)
293 PRK13184 pknD serine/threonine 100.0 9.9E-33 2.1E-37 344.6 27.8 270 806-1130 1-287 (932)
294 cd06616 PKc_MKK4 Catalytic dom 100.0 3.2E-33 6.9E-38 313.3 21.2 266 806-1135 3-273 (288)
295 cd07836 STKc_Pho85 Catalytic d 100.0 8.8E-33 1.9E-37 308.5 24.6 279 808-1132 1-284 (284)
296 cd05040 PTKc_Ack_like Catalyti 100.0 1.5E-32 3.2E-37 302.2 25.9 249 813-1130 1-255 (257)
297 cd08530 STKc_CNK2-like Catalyt 100.0 1.1E-32 2.3E-37 302.1 24.1 253 808-1131 1-255 (256)
298 cd08222 STKc_Nek11 Catalytic d 100.0 6E-33 1.3E-37 306.1 22.2 257 808-1132 1-260 (260)
299 cd05046 PTK_CCK4 Pseudokinase 100.0 1.2E-32 2.5E-37 306.4 24.5 258 807-1131 5-274 (275)
300 cd05041 PTKc_Fes_like Catalyti 100.0 1.8E-32 3.8E-37 300.5 25.6 248 813-1131 1-250 (251)
301 KOG4278 Protein tyrosine kinas 100.0 2.5E-33 5.3E-38 319.7 19.2 255 808-1133 268-523 (1157)
302 cd05095 PTKc_DDR2 Catalytic do 100.0 1.4E-32 2.9E-37 310.2 25.0 265 807-1131 5-295 (296)
303 cd07855 STKc_ERK5 Catalytic do 100.0 6.8E-33 1.5E-37 318.6 22.9 290 807-1135 5-300 (334)
304 cd07835 STKc_CDK1_like Catalyt 100.0 9.9E-33 2.1E-37 308.3 23.4 278 809-1132 1-283 (283)
305 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.5E-32 3.3E-37 307.8 24.9 270 809-1132 6-282 (284)
306 cd05110 PTKc_HER4 Catalytic do 100.0 1.9E-32 4.2E-37 310.4 25.9 258 805-1134 5-269 (303)
307 smart00219 TyrKc Tyrosine kina 100.0 1.7E-32 3.7E-37 300.5 24.5 250 809-1129 1-257 (258)
308 cd05572 STKc_cGK_PKG Catalytic 100.0 1.5E-32 3.2E-37 303.4 24.1 247 815-1134 1-257 (262)
309 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.2E-32 2.6E-37 309.4 23.7 282 805-1132 3-291 (291)
310 cd05633 STKc_GRK3 Catalytic do 100.0 1.2E-32 2.6E-37 308.6 23.4 249 814-1135 1-261 (279)
311 KOG0607 MAP kinase-interacting 100.0 2E-33 4.4E-38 302.0 16.1 269 809-1135 79-367 (463)
312 cd06653 STKc_MEKK3_like_1 Cata 100.0 2.6E-32 5.7E-37 302.3 25.4 258 807-1131 2-263 (264)
313 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.6E-32 3.5E-37 316.1 24.5 288 807-1135 5-297 (337)
314 cd05122 PKc_STE Catalytic doma 100.0 2.2E-32 4.8E-37 297.1 24.1 251 808-1131 1-253 (253)
315 cd07852 STKc_MAPK15 Catalytic 100.0 1.3E-32 2.9E-37 316.4 23.6 291 805-1135 5-301 (337)
316 KOG2345 Serine/threonine prote 100.0 2.3E-33 4.9E-38 294.1 15.3 275 807-1132 21-299 (302)
317 cd06614 STKc_PAK Catalytic dom 100.0 1.9E-32 4.2E-37 306.9 23.9 257 806-1135 18-276 (286)
318 KOG0199 ACK and related non-re 100.0 3.1E-33 6.8E-38 323.8 17.8 261 805-1135 108-374 (1039)
319 cd05074 PTKc_Tyro3 Catalytic d 100.0 5E-32 1.1E-36 300.7 26.9 264 809-1132 1-271 (273)
320 cd06627 STKc_Cdc7_like Catalyt 100.0 3E-32 6.5E-37 297.9 24.7 252 808-1132 1-254 (254)
321 KOG0666 Cyclin C-dependent kin 100.0 6.9E-34 1.5E-38 304.9 11.4 299 804-1135 21-343 (438)
322 cd08216 PK_STRAD Pseudokinase 100.0 2.7E-32 5.8E-37 310.0 24.9 291 809-1135 4-301 (314)
323 KOG0196 Tyrosine kinase, EPH ( 100.0 9.8E-34 2.1E-38 332.5 13.2 260 807-1134 629-892 (996)
324 cd07879 STKc_p38delta_MAPK13 C 100.0 2.3E-32 5.1E-37 315.5 24.5 285 807-1136 15-304 (342)
325 cd05611 STKc_Rim15_like Cataly 100.0 2E-32 4.3E-37 302.0 22.9 250 813-1135 2-257 (260)
326 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 9.8E-33 2.1E-37 304.9 20.4 246 813-1130 1-257 (258)
327 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.6E-32 5.7E-37 299.9 23.6 245 813-1130 1-258 (259)
328 cd08528 STKc_Nek10 Catalytic d 100.0 2.9E-32 6.2E-37 302.2 24.0 261 808-1131 1-268 (269)
329 cd07840 STKc_CDK9_like Catalyt 100.0 1.8E-32 3.8E-37 305.6 22.4 282 809-1132 1-287 (287)
330 cd05578 STKc_Yank1 Catalytic d 100.0 8.4E-33 1.8E-37 304.6 19.6 251 808-1132 1-258 (258)
331 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.7E-32 1E-36 313.3 26.7 285 807-1135 15-304 (343)
332 PTZ00024 cyclin-dependent prot 100.0 1.8E-32 3.9E-37 314.9 22.8 299 807-1135 8-319 (335)
333 cd07877 STKc_p38alpha_MAPK14 C 100.0 4.2E-32 9E-37 313.9 25.7 284 807-1134 17-305 (345)
334 cd05577 STKc_GRK Catalytic dom 100.0 1.8E-32 3.9E-37 306.0 21.9 254 815-1136 1-261 (277)
335 cd06635 STKc_TAO1 Catalytic do 100.0 5.6E-32 1.2E-36 308.8 26.3 259 808-1138 26-286 (317)
336 cd07864 STKc_CDK12 Catalytic d 100.0 2.5E-32 5.5E-37 307.9 22.9 293 806-1132 6-302 (302)
337 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.8E-32 8.2E-37 313.8 24.8 297 807-1134 5-305 (342)
338 cd05581 STKc_PDK1 Catalytic do 100.0 2.2E-32 4.8E-37 303.7 21.8 263 807-1132 1-280 (280)
339 cd07857 STKc_MPK1 Catalytic do 100.0 6.5E-32 1.4E-36 310.3 26.3 288 808-1133 1-296 (332)
340 cd06657 STKc_PAK4 Catalytic do 100.0 3.6E-32 7.8E-37 307.1 23.8 258 809-1140 22-281 (292)
341 KOG0612 Rho-associated, coiled 100.0 8.2E-34 1.8E-38 344.4 11.0 266 806-1137 74-346 (1317)
342 cd07838 STKc_CDK4_6_like Catal 100.0 7.1E-32 1.5E-36 301.1 25.8 282 809-1132 1-287 (287)
343 cd08226 PK_STRAD_beta Pseudoki 100.0 5.9E-32 1.3E-36 310.1 25.8 287 813-1135 4-314 (328)
344 cd05606 STKc_beta_ARK Catalyti 100.0 3.2E-32 7E-37 304.8 23.0 251 814-1135 1-261 (278)
345 cd05579 STKc_MAST_like Catalyt 100.0 2.9E-32 6.2E-37 299.6 21.9 258 815-1135 1-263 (265)
346 KOG0983 Mitogen-activated prot 100.0 4.2E-33 9.1E-38 294.5 14.4 264 803-1134 88-354 (391)
347 cd06606 STKc_MAPKKK Catalytic 100.0 6.1E-32 1.3E-36 294.9 24.0 256 808-1132 1-260 (260)
348 cd05118 STKc_CMGC Catalytic do 100.0 4.4E-32 9.6E-37 302.1 23.3 278 809-1132 1-283 (283)
349 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.3E-32 1.1E-36 301.6 23.8 273 807-1132 4-282 (284)
350 cd07834 STKc_MAPK Catalytic do 100.0 3.3E-32 7.1E-37 311.6 22.2 290 808-1135 1-295 (330)
351 cd07830 STKc_MAK_like Catalyti 100.0 6.8E-32 1.5E-36 301.2 24.1 277 809-1132 1-283 (283)
352 KOG4257 Focal adhesion tyrosin 100.0 8.4E-33 1.8E-37 316.7 16.6 251 809-1130 391-646 (974)
353 cd06618 PKc_MKK7 Catalytic dom 100.0 7E-32 1.5E-36 304.4 24.0 264 803-1135 11-279 (296)
354 KOG0586 Serine/threonine prote 100.0 9.5E-33 2.1E-37 320.8 17.3 258 802-1133 51-310 (596)
355 cd05613 STKc_MSK1_N N-terminal 100.0 5.6E-32 1.2E-36 303.8 22.8 260 808-1136 1-275 (290)
356 PHA02882 putative serine/threo 100.0 1.1E-31 2.5E-36 303.2 25.2 273 807-1130 12-293 (294)
357 cd07851 STKc_p38 Catalytic dom 100.0 6.1E-32 1.3E-36 312.2 23.4 286 806-1135 14-304 (343)
358 KOG0690 Serine/threonine prote 100.0 2.9E-33 6.3E-38 300.8 10.9 264 801-1137 162-432 (516)
359 KOG0662 Cyclin-dependent kinas 100.0 1.6E-32 3.6E-37 274.3 14.9 283 808-1137 3-291 (292)
360 cd06633 STKc_TAO3 Catalytic do 100.0 1.8E-31 3.9E-36 304.2 25.5 255 809-1135 23-279 (313)
361 cd07829 STKc_CDK_like Catalyti 100.0 1.3E-31 2.7E-36 298.3 23.6 279 809-1132 1-282 (282)
362 KOG0587 Traf2- and Nck-interac 100.0 3.5E-32 7.7E-37 324.3 19.4 264 807-1133 19-286 (953)
363 cd06634 STKc_TAO2 Catalytic do 100.0 2E-31 4.3E-36 303.0 24.4 258 808-1137 16-275 (308)
364 KOG0604 MAP kinase-activated p 100.0 1.3E-32 2.9E-37 294.1 13.2 262 806-1136 60-329 (400)
365 PHA03390 pk1 serine/threonine- 100.0 9.8E-32 2.1E-36 299.3 20.7 244 808-1133 15-266 (267)
366 KOG0669 Cyclin T-dependent kin 100.0 1.8E-33 3.8E-38 294.2 6.1 297 807-1136 17-322 (376)
367 cd05583 STKc_MSK_N N-terminal 100.0 1.6E-31 3.6E-36 299.7 22.3 260 808-1136 1-273 (288)
368 cd05610 STKc_MASTL Catalytic d 100.0 2.6E-31 5.7E-36 332.3 26.6 149 805-984 2-152 (669)
369 KOG0696 Serine/threonine prote 100.0 2.2E-32 4.8E-37 301.0 14.4 262 802-1136 344-613 (683)
370 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 3.9E-31 8.5E-36 303.8 24.7 280 806-1134 9-293 (328)
371 KOG1035 eIF-2alpha kinase GCN2 100.0 6.4E-32 1.4E-36 330.6 18.2 282 806-1133 478-875 (1351)
372 cd05123 STKc_AGC Catalytic dom 100.0 4.4E-31 9.4E-36 288.7 23.0 245 815-1132 1-250 (250)
373 KOG4236 Serine/threonine prote 100.0 1.2E-32 2.5E-37 310.3 10.5 254 812-1134 569-824 (888)
374 KOG2052 Activin A type IB rece 100.0 2.1E-31 4.4E-36 298.3 19.4 266 808-1135 212-505 (513)
375 KOG0614 cGMP-dependent protein 100.0 1.1E-32 2.4E-37 310.4 9.3 267 800-1138 413-686 (732)
376 KOG1094 Discoidin domain recep 100.0 1.5E-31 3.2E-36 305.6 17.7 264 807-1133 538-804 (807)
377 KOG3653 Transforming growth fa 100.0 1.3E-30 2.7E-35 294.0 21.7 268 806-1137 209-507 (534)
378 KOG1006 Mitogen-activated prot 100.0 2.2E-32 4.7E-37 288.5 5.6 266 807-1134 64-332 (361)
379 KOG4250 TANK binding protein k 100.0 2.7E-31 5.8E-36 312.1 14.7 212 807-1052 13-226 (732)
380 KOG0603 Ribosomal protein S6 k 100.0 7.7E-31 1.7E-35 306.5 16.3 242 805-1132 320-566 (612)
381 KOG0671 LAMMER dual specificit 100.0 3.4E-31 7.4E-36 292.6 12.3 285 807-1135 89-412 (415)
382 PLN03225 Serine/threonine-prot 100.0 1.4E-29 3E-34 310.2 21.8 292 804-1138 129-459 (566)
383 KOG1025 Epidermal growth facto 100.0 7.5E-30 1.6E-34 300.3 17.6 253 809-1133 698-957 (1177)
384 cd05576 STKc_RPK118_like Catal 100.0 9.9E-30 2.1E-34 278.0 16.4 227 818-1132 4-237 (237)
385 KOG1151 Tousled-like protein k 100.0 1.5E-30 3.3E-35 288.3 9.3 280 807-1134 463-746 (775)
386 KOG0200 Fibroblast/platelet-de 100.0 7.9E-29 1.7E-33 306.2 24.3 259 808-1132 297-578 (609)
387 KOG0668 Casein kinase II, alph 100.0 7.6E-30 1.6E-34 264.0 11.7 280 801-1134 32-327 (338)
388 smart00220 S_TKc Serine/Threon 100.0 3E-28 6.4E-33 262.5 21.7 241 819-1132 1-244 (244)
389 KOG0608 Warts/lats-like serine 100.0 3.6E-29 7.7E-34 287.2 14.6 268 809-1137 631-936 (1034)
390 KOG1027 Serine/threonine prote 100.0 8.8E-30 1.9E-34 302.7 9.6 260 809-1135 511-773 (903)
391 KOG0695 Serine/threonine prote 100.0 7.8E-29 1.7E-33 267.1 13.1 259 804-1135 247-522 (593)
392 KOG0984 Mitogen-activated prot 100.0 1.3E-28 2.8E-33 252.0 14.0 224 807-1071 46-274 (282)
393 KOG1290 Serine/threonine prote 100.0 7.6E-28 1.6E-32 271.8 20.8 136 807-965 78-224 (590)
394 PLN03224 probable serine/threo 100.0 9E-28 2E-32 288.1 22.8 290 805-1135 143-506 (507)
395 KOG0664 Nemo-like MAPK-related 100.0 2E-29 4.4E-34 265.8 4.0 284 807-1133 53-347 (449)
396 KOG0576 Mitogen-activated prot 100.0 3.4E-29 7.5E-34 290.6 5.4 262 806-1135 14-277 (829)
397 KOG0665 Jun-N-terminal kinase 99.9 3.2E-28 7E-33 263.6 11.1 282 807-1133 17-314 (369)
398 KOG0670 U4/U6-associated splic 99.9 3.4E-28 7.4E-33 275.0 10.7 277 807-1134 432-751 (752)
399 KOG0444 Cytoskeletal regulator 99.9 1.2E-29 2.5E-34 290.0 -2.4 277 18-303 56-383 (1255)
400 KOG1024 Receptor-like protein 99.9 3.3E-26 7.1E-31 252.0 16.9 258 808-1131 285-553 (563)
401 KOG1152 Signal transduction se 99.9 4.9E-27 1.1E-31 268.8 10.6 208 803-1052 557-771 (772)
402 PLN00113 leucine-rich repeat r 99.9 2.7E-26 5.9E-31 299.9 18.8 255 17-281 118-378 (968)
403 KOG1167 Serine/threonine prote 99.9 2.6E-26 5.6E-31 257.4 11.5 288 806-1134 35-386 (418)
404 KOG4194 Membrane glycoprotein 99.9 1.9E-27 4.1E-32 272.0 0.6 273 18-296 126-412 (873)
405 cd00180 PKc Catalytic domain o 99.9 1.7E-24 3.6E-29 226.7 21.6 212 815-1130 1-215 (215)
406 KOG1345 Serine/threonine kinas 99.9 5.2E-26 1.1E-30 240.9 9.3 264 802-1134 18-292 (378)
407 KOG4194 Membrane glycoprotein 99.9 6.8E-27 1.5E-31 267.4 2.1 286 5-297 138-437 (873)
408 smart00221 STYKc Protein kinas 99.9 6.7E-24 1.4E-28 227.0 22.1 215 809-1068 1-220 (225)
409 PLN00181 protein SPA1-RELATED; 99.9 5.1E-25 1.1E-29 281.6 11.9 225 865-1134 27-270 (793)
410 KOG0444 Cytoskeletal regulator 99.9 1.1E-25 2.4E-30 257.7 -2.8 161 106-271 214-376 (1255)
411 smart00750 KIND kinase non-cat 99.9 4.3E-23 9.3E-28 214.6 15.0 168 909-1135 1-171 (176)
412 KOG0472 Leucine-rich repeat pr 99.9 7.4E-26 1.6E-30 250.1 -8.2 243 18-271 46-289 (565)
413 KOG0472 Leucine-rich repeat pr 99.9 2.3E-24 4.9E-29 238.5 -0.7 123 19-148 185-308 (565)
414 KOG1164 Casein kinase (serine/ 99.9 1.6E-20 3.5E-25 215.7 24.0 270 808-1132 19-296 (322)
415 KOG4237 Extracellular matrix p 99.9 1.4E-23 3.1E-28 232.3 -3.2 270 14-286 64-375 (498)
416 KOG1165 Casein kinase (serine/ 99.9 2.5E-20 5.5E-25 202.8 20.0 217 808-1062 29-251 (449)
417 COG0515 SPS1 Serine/threonine 99.9 1.4E-19 3.1E-24 199.9 26.5 273 809-1134 2-280 (384)
418 KOG0590 Checkpoint kinase and 99.8 6.5E-22 1.4E-26 242.4 8.0 270 807-1135 317-591 (601)
419 PRK15370 E3 ubiquitin-protein 99.8 3.9E-21 8.4E-26 239.8 12.1 223 19-271 180-402 (754)
420 PRK15387 E3 ubiquitin-protein 99.8 1.4E-20 3E-25 233.7 15.9 213 20-271 204-416 (788)
421 PRK15370 E3 ubiquitin-protein 99.8 9E-21 2E-25 236.5 13.2 225 19-270 201-428 (754)
422 KOG0195 Integrin-linked kinase 99.8 6.5E-21 1.4E-25 201.8 9.4 259 799-1132 182-445 (448)
423 KOG0617 Ras suppressor protein 99.8 7.2E-23 1.6E-27 204.4 -6.5 164 66-231 31-194 (264)
424 KOG1163 Casein kinase (serine/ 99.8 1.7E-19 3.8E-24 188.9 17.6 211 805-1055 13-226 (341)
425 PRK09188 serine/threonine prot 99.8 5.6E-20 1.2E-24 212.6 14.5 172 806-1020 17-194 (365)
426 PRK15387 E3 ubiquitin-protein 99.8 5E-20 1.1E-24 228.6 14.8 239 17-298 222-460 (788)
427 KOG0618 Serine/threonine phosp 99.8 6.1E-22 1.3E-26 238.1 -2.4 244 16-269 218-488 (1081)
428 KOG1240 Protein kinase contain 99.8 3.1E-20 6.7E-25 226.2 9.7 258 808-1129 24-291 (1431)
429 KOG4158 BRPK/PTEN-induced prot 99.8 2E-19 4.2E-24 199.3 14.4 216 868-1124 274-505 (598)
430 KOG0618 Serine/threonine phosp 99.8 6.6E-21 1.4E-25 229.3 -2.9 263 18-291 200-491 (1081)
431 KOG0617 Ras suppressor protein 99.8 3.4E-21 7.5E-26 192.4 -8.0 190 82-279 25-219 (264)
432 cd05147 RIO1_euk RIO kinase fa 99.8 3E-18 6.4E-23 182.2 13.4 145 812-985 2-166 (190)
433 PF14531 Kinase-like: Kinase-l 99.8 1.6E-18 3.4E-23 193.0 11.5 255 808-1120 13-288 (288)
434 PRK10359 lipopolysaccharide co 99.8 4.9E-18 1.1E-22 184.0 12.7 184 807-1044 31-216 (232)
435 KOG0603 Ribosomal protein S6 k 99.7 4.6E-19 1E-23 208.3 3.3 237 814-1134 1-248 (612)
436 cd05145 RIO1_like RIO kinase f 99.7 1.5E-17 3.3E-22 176.7 14.6 146 812-987 2-168 (190)
437 PLN03210 Resistant to P. syrin 99.7 7.5E-17 1.6E-21 213.4 21.1 241 18-279 612-889 (1153)
438 PLN03210 Resistant to P. syrin 99.7 1.7E-16 3.7E-21 210.1 23.4 235 18-271 590-860 (1153)
439 PRK12274 serine/threonine prot 99.7 6.4E-17 1.4E-21 172.1 15.4 201 810-1053 5-210 (218)
440 KOG4237 Extracellular matrix p 99.7 4.1E-19 8.9E-24 197.3 -4.9 224 42-272 68-337 (498)
441 KOG0606 Microtubule-associated 99.7 2.5E-17 5.3E-22 201.5 8.7 163 939-1137 153-323 (1205)
442 KOG1023 Natriuretic peptide re 99.7 1.3E-16 2.8E-21 188.1 13.2 215 864-1133 1-224 (484)
443 PRK14879 serine/threonine prot 99.7 4.2E-16 9E-21 167.4 16.2 142 813-985 2-143 (211)
444 PRK10345 hypothetical protein; 99.7 2.9E-16 6.2E-21 169.2 14.6 144 810-983 5-156 (210)
445 TIGR03724 arch_bud32 Kae1-asso 99.6 1.3E-15 2.9E-20 162.1 15.0 138 814-985 1-138 (199)
446 KOG1166 Mitotic checkpoint ser 99.6 6.9E-16 1.5E-20 193.1 14.8 201 806-1048 697-901 (974)
447 PRK09605 bifunctional UGMP fam 99.6 1.4E-15 3.1E-20 186.5 16.4 145 806-985 332-476 (535)
448 cd00116 LRR_RI Leucine-rich re 99.6 6.6E-17 1.4E-21 184.2 2.8 251 21-271 2-292 (319)
449 KOG0532 Leucine-rich repeat (L 99.6 2E-17 4.3E-22 190.8 -2.0 217 45-296 54-270 (722)
450 smart00090 RIO RIO-like kinase 99.6 1.4E-15 3E-20 167.3 12.3 146 809-985 30-197 (237)
451 KOG1033 eIF-2alpha kinase PEK/ 99.6 5.4E-16 1.2E-20 179.6 5.8 187 896-1132 328-515 (516)
452 cd00116 LRR_RI Leucine-rich re 99.6 3.8E-16 8.2E-21 178.0 3.8 223 45-270 2-263 (319)
453 cd05144 RIO2_C RIO kinase fami 99.6 7.9E-15 1.7E-19 156.6 11.8 143 809-987 17-176 (198)
454 KOG0532 Leucine-rich repeat (L 99.5 4.4E-16 9.5E-21 179.9 -3.0 205 19-257 52-257 (722)
455 PRK01723 3-deoxy-D-manno-octul 99.5 1.5E-13 3.3E-18 151.3 14.4 146 812-984 36-190 (239)
456 COG4886 Leucine-rich repeat (L 99.5 1.8E-14 3.8E-19 170.1 7.4 194 45-271 97-291 (394)
457 KOG0590 Checkpoint kinase and 99.5 1.8E-15 3.9E-20 185.9 -4.1 266 806-1134 19-291 (601)
458 cd05119 RIO RIO kinase family, 99.5 3.5E-13 7.5E-18 142.0 12.4 140 812-986 2-164 (187)
459 COG4886 Leucine-rich repeat (L 99.5 7.6E-14 1.7E-18 164.7 7.8 191 95-290 97-291 (394)
460 cd05120 APH_ChoK_like Aminogly 99.4 9.4E-13 2E-17 131.4 11.0 132 811-985 2-138 (155)
461 PLN03150 hypothetical protein; 99.3 2.8E-12 6E-17 159.8 11.0 90 189-280 420-511 (623)
462 KOG1266 Protein kinase [Signal 99.2 3.6E-11 7.8E-16 132.0 7.7 214 862-1133 119-335 (458)
463 cd05146 RIO3_euk RIO kinase fa 99.2 2.6E-10 5.6E-15 121.4 13.0 143 812-986 2-174 (197)
464 KOG0531 Protein phosphatase 1, 99.1 3E-12 6.5E-17 152.4 -2.4 218 39-269 70-289 (414)
465 KOG0601 Cyclin-dependent kinas 99.1 7E-11 1.5E-15 140.0 8.4 257 809-1133 116-383 (524)
466 PF14580 LRR_9: Leucine-rich r 99.1 3.6E-11 7.8E-16 125.6 4.3 129 37-170 15-146 (175)
467 KOG0531 Protein phosphatase 1, 99.1 8.6E-12 1.9E-16 148.5 -0.5 238 20-271 75-319 (414)
468 KOG3207 Beta-tubulin folding c 99.1 1.8E-11 3.8E-16 138.9 1.6 203 67-271 120-340 (505)
469 KOG1259 Nischarin, modulator o 99.1 1.8E-11 3.8E-16 132.5 1.4 131 135-271 282-413 (490)
470 KOG0606 Microtubule-associated 99.1 2E-11 4.4E-16 150.5 2.0 274 804-1137 801-1100(1205)
471 TIGR01982 UbiB 2-polyprenylphe 99.1 2.1E-10 4.5E-15 137.2 10.4 149 813-988 123-309 (437)
472 PRK04750 ubiB putative ubiquin 99.1 1.5E-10 3.2E-15 140.4 8.1 166 806-988 119-316 (537)
473 cd05151 ChoK Choline Kinase (C 99.1 5E-10 1.1E-14 115.7 10.3 127 812-984 3-135 (170)
474 KOG0601 Cyclin-dependent kinas 99.1 1.7E-10 3.7E-15 136.8 7.0 254 805-1135 263-520 (524)
475 KOG3087 Serine/threonine prote 99.1 2.2E-09 4.9E-14 110.4 14.0 153 811-984 11-164 (229)
476 KOG1259 Nischarin, modulator o 99.0 6.8E-11 1.5E-15 128.0 2.6 136 155-293 275-416 (490)
477 COG3642 Mn2+-dependent serine/ 99.0 2.7E-09 5.8E-14 110.5 13.6 135 813-984 2-139 (204)
478 PF14580 LRR_9: Leucine-rich r 99.0 2E-10 4.3E-15 120.1 4.8 109 161-271 16-127 (175)
479 KOG3207 Beta-tubulin folding c 99.0 5.3E-11 1.2E-15 135.1 -0.2 206 38-248 118-341 (505)
480 KOG1909 Ran GTPase-activating 99.0 5E-11 1.1E-15 132.3 -2.3 232 38-269 27-310 (382)
481 KOG1909 Ran GTPase-activating 98.9 1.3E-10 2.8E-15 129.1 -2.0 230 17-246 30-311 (382)
482 PLN03150 hypothetical protein; 98.7 1.7E-08 3.6E-13 126.2 9.1 111 165-277 419-533 (623)
483 KOG1243 Protein kinase [Genera 98.7 8.5E-08 1.8E-12 115.1 13.6 142 858-1046 57-199 (690)
484 PRK15123 lipopolysaccharide co 98.7 2.8E-07 6.1E-12 103.3 16.4 151 819-984 34-193 (268)
485 PF01163 RIO1: RIO1 family; I 98.7 5.7E-08 1.2E-12 103.1 10.1 131 822-985 1-155 (188)
486 cd05154 ACAD10_11_like Acyl-Co 98.7 5.8E-08 1.3E-12 104.4 10.3 143 813-984 4-205 (223)
487 KOG4658 Apoptotic ATPase [Sign 98.7 1.1E-08 2.4E-13 130.8 4.8 198 20-224 526-731 (889)
488 KOG4658 Apoptotic ATPase [Sign 98.7 9.6E-09 2.1E-13 131.3 3.0 251 16-271 544-808 (889)
489 KOG1859 Leucine-rich repeat pr 98.6 4.5E-10 9.7E-15 133.4 -10.3 179 84-271 102-293 (1096)
490 KOG4579 Leucine-rich repeat (L 98.6 3E-09 6.4E-14 104.3 -3.0 115 156-271 45-160 (177)
491 PF13855 LRR_8: Leucine rich r 98.6 2.6E-08 5.6E-13 85.9 2.5 59 211-269 2-61 (61)
492 COG4248 Uncharacterized protei 98.5 4.8E-06 1E-10 95.1 18.5 273 810-1132 14-299 (637)
493 PF13855 LRR_8: Leucine rich r 98.5 7.4E-08 1.6E-12 83.0 3.2 58 42-102 2-60 (61)
494 PF06293 Kdo: Lipopolysacchari 98.5 8.8E-07 1.9E-11 95.6 12.2 111 856-985 57-170 (206)
495 KOG3741 Poly(A) ribonuclease s 98.5 5.1E-06 1.1E-10 97.3 18.7 223 820-1132 289-524 (655)
496 KOG2137 Protein kinase [Signal 98.4 4.8E-08 1.1E-12 117.6 1.2 163 937-1135 107-271 (700)
497 PRK09902 hypothetical protein; 98.4 4.9E-06 1.1E-10 89.3 14.3 148 816-985 27-179 (216)
498 KOG4579 Leucine-rich repeat (L 98.4 1.8E-08 3.8E-13 99.0 -3.9 86 165-250 78-163 (177)
499 PRK15386 type III secretion pr 98.4 4.7E-07 1E-11 105.5 6.2 136 37-221 48-188 (426)
500 COG0478 RIO-like serine/threon 98.3 2.1E-06 4.5E-11 94.2 10.3 141 810-985 94-251 (304)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.8e-59 Score=609.23 Aligned_cols=293 Identities=22% Similarity=0.217 Sum_probs=200.3
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcCCcEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLRNL 96 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~L~~L 96 (1142)
.++.|.+..|++....+..|.++++|++|+|++|.+++.+|..++.+ ++|+.|+|++|.++ .+|..++.+++|+.|
T Consensus 285 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l---~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L 361 (968)
T PLN00113 285 KLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL---PRLQVLQLWSNKFSGEIPKNLGKHNNLTVL 361 (968)
T ss_pred CcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcC---CCCCEEECcCCCCcCcCChHHhCCCCCcEE
Confidence 45555555566555555555555666666666665555555544333 55555555555554 445555555555555
Q ss_pred EccCCCCC-cCch------------------------hhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCC
Q 001142 97 KFFGNEIN-LFPS------------------------EVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPR 150 (1142)
Q Consensus 97 ~Ls~N~L~-~lP~------------------------~l~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~n~~n 150 (1142)
+|++|+++ .+|. .++++++|+.|+|++|.+. ..|..+..+++|+.|++++|.+
T Consensus 362 ~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l- 440 (968)
T PLN00113 362 DLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNL- 440 (968)
T ss_pred ECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcc-
Confidence 55555554 3444 4444555555555555532 3444455555555555555332
Q ss_pred CCcccchhhhcCCCCCcEEEccCCCCC-ccCcccCCCCCCCEEEccCCCCC-ccchhhcCCCCCCEEEccCCCCC-ccCc
Q 001142 151 PSVLTLLSEIAGLKCLTKLSVCHFSIR-YLPPEIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPS 227 (1142)
Q Consensus 151 ~~~~~lp~~l~~L~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~Ls-~IP~ 227 (1142)
.+.+|..+..+++|+.|+|++|++. .+|..+ .+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|.
T Consensus 441 --~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 517 (968)
T PLN00113 441 --QGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPD 517 (968)
T ss_pred --cCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCCh
Confidence 3334445556666666666666665 344433 4567888888888887 67888999999999999999998 7899
Q ss_pred cccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhccCCCCCCCCCCCCcccccccccccCC
Q 001142 228 GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEG 307 (1142)
Q Consensus 228 ~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~~~~~~~~~~~~~~ 307 (1142)
.+.++++|+.|+|++|.|++.+|..|..+++|+.|+|++|++++ .+|..+........+...+|.+.++.|. .
T Consensus 518 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~l~ls~N~l~~~~p~-----~ 590 (968)
T PLN00113 518 ELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSG--EIPKNLGNVESLVQVNISHNHLHGSLPS-----T 590 (968)
T ss_pred HHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccc--cCChhHhcCcccCEEeccCCcceeeCCC-----c
Confidence 99999999999999999999999999999999999999999998 6888887776777777788888777764 3
Q ss_pred CCCCCCCCccCCCCCCC
Q 001142 308 PMLENDGNVSFSAESDA 324 (1142)
Q Consensus 308 ~~l~~~~~~sF~~n~~l 324 (1142)
..+..+...+|.||+++
T Consensus 591 ~~~~~~~~~~~~~n~~l 607 (968)
T PLN00113 591 GAFLAINASAVAGNIDL 607 (968)
T ss_pred chhcccChhhhcCCccc
Confidence 45667888999999865
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-45 Score=408.34 Aligned_cols=275 Identities=23% Similarity=0.301 Sum_probs=221.8
Q ss_pred CCCCCCC-cceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 802 DPGSFPS-LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 802 ~~~~~~~-y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
.+.++.+ |.+.+.||+|+||.|-+|.. .++.+|+|++.-............ ...+.+|+++|++|+|||||+++++
T Consensus 166 ~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~-~~~v~~EieILkkL~HP~IV~~~d~ 244 (475)
T KOG0615|consen 166 PPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAK-TRDVQNEIEILKKLSHPNIVRIKDF 244 (475)
T ss_pred ccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccc-hhhhHHHHHHHHhcCCCCEEEEeee
Confidence 3455555 79999999999999999976 678899999654433221111111 1124799999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
|+.++.. ||||||++||+|.+.+-. .+.+.+...+.+++|++.|+.|||++||+||||||+
T Consensus 245 f~~~ds~--------------YmVlE~v~GGeLfd~vv~-----nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPe 305 (475)
T KOG0615|consen 245 FEVPDSS--------------YMVLEYVEGGELFDKVVA-----NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPE 305 (475)
T ss_pred eecCCce--------------EEEEEEecCccHHHHHHh-----ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcc
Confidence 9987644 999999999999999876 457888999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||+..+ .....+||+|||+|+...... -..+.+|||.|.|||++.... ...+..++|+||+||
T Consensus 306 NILl~~~----~e~~llKItDFGlAK~~g~~s-----------fm~TlCGTpsYvAPEVl~~kg-~~~~~~kVDiWSlGc 369 (475)
T KOG0615|consen 306 NILLSND----AEDCLLKITDFGLAKVSGEGS-----------FMKTLCGTPSYVAPEVLASKG-VEYYPSKVDIWSLGC 369 (475)
T ss_pred eEEeccC----CcceEEEecccchhhccccce-----------ehhhhcCCccccChhheecCC-eecccchheeeeccc
Confidence 9999765 234789999999998764321 224678999999999997632 233456999999999
Q ss_pred HHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLTLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+||-+++|.+||.+..... +.++|..+.....+..+. .++++..+||.+||..||
T Consensus 370 vLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~------------------------~Iseea~dlI~~mL~VdP 425 (475)
T KOG0615|consen 370 VLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWD------------------------RISEEALDLINWMLVVDP 425 (475)
T ss_pred eEEEEeccCCCcccccCCccHHHHHhcCcccccChhhh------------------------hhhHHHHHHHHHhhEeCc
Confidence 9999999999998755444 778888887665443322 667889999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001142 1118 TERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~ss 1136 (1142)
++|||++|+|+|+|++..+
T Consensus 426 ~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 426 ENRPSADEALNHPWFKDAP 444 (475)
T ss_pred ccCcCHHHHhcChhhhccc
Confidence 9999999999999999665
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-44 Score=399.07 Aligned_cols=259 Identities=28% Similarity=0.427 Sum_probs=218.8
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
.+..+++..+.||+|..|+||++++. +..+|.|+..+.. ... +++++.+|++++++.+|||||.+||.|..
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~---~~~----~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNI---DPA----LQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccC---CHH----HHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 34557889999999999999999986 5556666653321 222 33445899999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCe
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENI 960 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NI 960 (1142)
+.. ..+|+||||++|||++++.. .+++++...-+|+.+|++||.|||+ ++||||||||+||
T Consensus 149 ~~~-------------~isI~mEYMDgGSLd~~~k~-----~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNl 210 (364)
T KOG0581|consen 149 NGE-------------EISICMEYMDGGSLDDILKR-----VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNL 210 (364)
T ss_pred CCc-------------eEEeehhhcCCCCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHe
Confidence 552 34999999999999999986 2579999999999999999999995 8999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.. +.|||||||.+..+... ...+++||..|||||.+.+ ..|+.++||||||+++
T Consensus 211 LvNsk-------GeVKicDFGVS~~lvnS------------~a~tfvGT~~YMsPERi~g----~~Ys~~sDIWSLGLsl 267 (364)
T KOG0581|consen 211 LVNSK-------GEVKICDFGVSGILVNS------------IANTFVGTSAYMSPERISG----ESYSVKSDIWSLGLSL 267 (364)
T ss_pred eeccC-------CCEEeccccccHHhhhh------------hcccccccccccChhhhcC----CcCCcccceecccHHH
Confidence 99987 89999999999876542 2346789999999999987 6899999999999999
Q ss_pred HHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 001142 1041 LELLTLQVPYMGL-----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE 1115 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~-----~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~ 1115 (1142)
+|+++|+.||... ...+++.+|..+..|.++.. .+++++++|+..||++
T Consensus 268 lE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~--------------------------~fS~ef~~FV~~CL~K 321 (364)
T KOG0581|consen 268 LELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG--------------------------EFSPEFRSFVSCCLRK 321 (364)
T ss_pred HHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc--------------------------cCCHHHHHHHHHHhcC
Confidence 9999999999763 56677788877777665531 3677899999999999
Q ss_pred CCCCCCCHHHHHHHHHhhcCC
Q 001142 1116 NPTERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1116 DP~~RPSa~EVL~~L~~~~ss 1136 (1142)
||.+|||+.|+++|+|.+...
T Consensus 322 dp~~R~s~~qLl~Hpfi~~~~ 342 (364)
T KOG0581|consen 322 DPSERPSAKQLLQHPFIKKFE 342 (364)
T ss_pred CcccCCCHHHHhcCHHHhhcc
Confidence 999999999999999998543
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-43 Score=408.68 Aligned_cols=258 Identities=26% Similarity=0.367 Sum_probs=219.6
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
++.. ..|..++.||+|+|+.+|.+++ .+..+|+|++..+... .....+ .+.+||+|.++|+|||||+++++|
T Consensus 14 D~~~-~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~-k~~~re----Kv~~EIeIHr~L~HpnIV~f~~~F 87 (592)
T KOG0575|consen 14 DPRS-KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLK-KPKQRE----KVLNEIEIHRSLKHPNIVQFYHFF 87 (592)
T ss_pred cCCc-ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhc-CcchHH----HHHHHHHHHHhcCCCcEEeeeeEe
Confidence 3444 6799999999999999999997 6788999986543221 222223 347999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
++.+++ |||.|+|+.++|..++++ ++++++.+++.+++||+.||.|||+++|+|||||..|
T Consensus 88 EDs~nV--------------YivLELC~~~sL~el~Kr-----rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGN 148 (592)
T KOG0575|consen 88 EDSNNV--------------YIVLELCHRGSLMELLKR-----RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGN 148 (592)
T ss_pred ecCCce--------------EEEEEecCCccHHHHHHh-----cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhh
Confidence 988755 999999999999999985 5689999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
+|++++ .+|||+|||+|..+.... ....+.+|||.|.|||++.. ..++..+||||+|||
T Consensus 149 lfL~~~-------~~VKIgDFGLAt~le~~~----------Erk~TlCGTPNYIAPEVl~k----~gHsfEvDiWSlGcv 207 (592)
T KOG0575|consen 149 LFLNEN-------MNVKIGDFGLATQLEYDG----------ERKKTLCGTPNYIAPEVLNK----SGHSFEVDIWSLGCV 207 (592)
T ss_pred eeecCc-------CcEEecccceeeeecCcc----------cccceecCCCcccChhHhcc----CCCCCchhhhhhhhH
Confidence 999998 889999999998776432 12346789999999999985 678899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|.||.|++||+..+..+.+..|......-. ...+.+.++||.++|+.||.+
T Consensus 208 mYtLL~G~PPFetk~vkety~~Ik~~~Y~~P----------------------------~~ls~~A~dLI~~lL~~~P~~ 259 (592)
T KOG0575|consen 208 MYTLLVGRPPFETKTVKETYNKIKLNEYSMP----------------------------SHLSAEAKDLIRKLLRPNPSE 259 (592)
T ss_pred HHhhhhCCCCcccchHHHHHHHHHhcCcccc----------------------------cccCHHHHHHHHHHhcCCccc
Confidence 9999999999998888888888865543211 045567899999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001142 1120 RPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~ 1133 (1142)
|||+++|+.|.|+.
T Consensus 260 Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 260 RPSLDEVLDHPFFK 273 (592)
T ss_pred CCCHHHHhcCHhhh
Confidence 99999999999994
No 5
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.5e-44 Score=379.14 Aligned_cols=266 Identities=27% Similarity=0.435 Sum_probs=218.1
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee-Ee
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH-KI 880 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~-~~ 880 (1142)
+..+..+|++.++||+|+||+||++....+...++.+++.-........++ +..|+.+|++|+|||||+++++ +.
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~----~v~Ei~lLkQL~HpNIVqYy~~~f~ 89 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQD----CVKEISLLKQLNHPNIVQYYAHSFI 89 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHH----HHHHHHHHHhcCCchHHHHHHHhhh
Confidence 356677899999999999999999987444333333334322223333333 3899999999999999999994 43
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh--CC--ccccCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS--KH--IMHRDIK 956 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs--~g--IvHrDLK 956 (1142)
++.. -++||||||.+|+|..+|+.+.+. ...+++..+++++.|++.||.++|. .+ |+|||||
T Consensus 90 ~~~e-------------vlnivmE~c~~GDLsqmIk~~K~q-kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIK 155 (375)
T KOG0591|consen 90 EDNE-------------VLNIVMELCDAGDLSQMIKHFKKQ-KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIK 155 (375)
T ss_pred ccch-------------hhHHHHHhhcccCHHHHHHHHHhc-cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCc
Confidence 3322 258999999999999999976544 5789999999999999999999998 45 9999999
Q ss_pred CCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001142 957 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1036 (1142)
Q Consensus 957 p~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSL 1036 (1142)
|.||+++.+ +.|||+|||+++.+..... .....+|||+||+||.+.+ .+|+.|+||||+
T Consensus 156 PaNIFl~~~-------gvvKLGDfGL~r~l~s~~t----------fA~S~VGTPyYMSPE~i~~----~~Y~~kSDiWsl 214 (375)
T KOG0591|consen 156 PANIFLTAN-------GVVKLGDFGLGRFLSSKTT----------FAHSLVGTPYYMSPERIHE----SGYNFKSDIWSL 214 (375)
T ss_pred chheEEcCC-------CceeeccchhHhHhcchhH----------HHHhhcCCCcccCHHHHhc----CCCCcchhHHHH
Confidence 999999988 8999999999998765332 1235689999999999987 789999999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1037 GCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1037 GviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
||++|||+.-++||.+.+..++...|.++..|++++. .++.++..||..|+..|
T Consensus 215 GCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~--------------------------~YS~~l~~li~~ci~vd 268 (375)
T KOG0591|consen 215 GCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDE--------------------------HYSTDLRELINMCIAVD 268 (375)
T ss_pred HHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHH--------------------------HhhhHHHHHHHHHccCC
Confidence 9999999999999999999999999999988776642 56778999999999999
Q ss_pred CCCCCCHHHHHHHHHh
Q 001142 1117 PTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~ 1132 (1142)
|+.||+.-.++..+..
T Consensus 269 ~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 269 PEQRPDTVPYVQDIQS 284 (375)
T ss_pred cccCCCcchHHHHHHH
Confidence 9999996555555444
No 6
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-42 Score=396.38 Aligned_cols=265 Identities=30% Similarity=0.455 Sum_probs=217.3
Q ss_pred CCCCCCcceeeeecccCceEEEEEEECCcc-EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFGSAD-AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~-vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
...+.++.+.+.||.|+||+||+|.|.++. +|+|++.-.. ......+. +.+|+.+|.+++|||||+++|++.+
T Consensus 37 ~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~--~~~~~~~~----f~~E~~il~~l~HpNIV~f~G~~~~ 110 (362)
T KOG0192|consen 37 EIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPD--FDDESRKA----FRREASLLSRLRHPNIVQFYGACTS 110 (362)
T ss_pred ecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchh--cChHHHHH----HHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 344556678888999999999999999998 9999864332 22222334 4899999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCCCCe
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH-IMHRDIKSENI 960 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g-IvHrDLKp~NI 960 (1142)
... .++|||||+++|+|..+++.. ....+++..++.|+.|||+||+|||+++ ||||||||+||
T Consensus 111 ~~~-------------~~~iVtEy~~~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~Ni 174 (362)
T KOG0192|consen 111 PPG-------------SLCIVTEYMPGGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNI 174 (362)
T ss_pred CCC-------------ceEEEEEeCCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhE
Confidence 531 359999999999999999863 3467999999999999999999999999 99999999999
Q ss_pred eeccccccCCCCC-eEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 961 LIDLERKKADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 961 Lld~~~~~~~~~~-~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
|++.+ + ++||+|||+++...... .......||+.|||||++.+. ...|+.|+||||||++
T Consensus 175 Lv~~~-------~~~~KI~DFGlsr~~~~~~----------~~~~~~~GT~~wMAPEv~~~~--~~~~~~K~DvySFgIv 235 (362)
T KOG0192|consen 175 LVDLK-------GKTLKIADFGLSREKVISK----------TSMTSVAGTYRWMAPEVLRGE--KSPYTEKSDVYSFGIV 235 (362)
T ss_pred EEcCC-------CCEEEECCCccceeecccc----------ccccCCCCCccccChhhhcCC--CCcCCccchhhhHHHH
Confidence 99987 5 99999999997654321 011235799999999999853 3679999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|||+||+.||.+....++...+ ..+.+|.++. .+++.+..++.+||..||.
T Consensus 236 lWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~---------------------------~~~~~l~~l~~~CW~~dp~ 288 (362)
T KOG0192|consen 236 LWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPK---------------------------ECPPHLSSLMERCWLVDPS 288 (362)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCc---------------------------cCCHHHHHHHHHhCCCCCC
Confidence 99999999999998876666555 4555555443 3556799999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001142 1119 ERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~s 1135 (1142)
.||++.+++..+.....
T Consensus 289 ~RP~f~ei~~~l~~~~~ 305 (362)
T KOG0192|consen 289 RRPSFLEIVSRLESIMS 305 (362)
T ss_pred cCCCHHHHHHHHHHHHH
Confidence 99999999998876543
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-42 Score=381.53 Aligned_cols=267 Identities=25% Similarity=0.402 Sum_probs=209.3
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
....+.+|.+.+.||.|+||+||+|+++. ..||||. +.+........+.+ ..|+.+|+.++|||||.+++++
T Consensus 5 ~~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~--i~~~~l~~k~~e~L----~~Ei~iLkel~H~nIV~l~d~~ 78 (429)
T KOG0595|consen 5 SMRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKC--IAKKKLNKKLVELL----LSEIKILKELKHPNIVRLLDCI 78 (429)
T ss_pred cccccccceehhhccCcceEEEEEeEeccCCceEEeee--ehhhccCHHHHHHH----HHHHHHHHhcCCcceeeEEEEE
Confidence 34557889999999999999999999854 4555554 44332233333444 7999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+++++ |||||||.||+|.++|+. .+.+++..++.++.||+.||++||+++||||||||+|
T Consensus 79 ~~~~~i--------------~lVMEyC~gGDLs~yi~~-----~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQN 139 (429)
T KOG0595|consen 79 EDDDFI--------------YLVMEYCNGGDLSDYIRR-----RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQN 139 (429)
T ss_pred ecCCeE--------------EEEEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcce
Confidence 987744 999999999999999987 3579999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++..... .....+||+|||+|+.+.... ...+.+|+|.|||||++.. ..|+.|+|+||+|+|
T Consensus 140 iLLs~~~~~-~~~~~LKIADFGfAR~L~~~~-----------~a~tlcGSplYMAPEV~~~----~~YdAKADLWSiG~I 203 (429)
T KOG0595|consen 140 ILLSTTARN-DTSPVLKIADFGFARFLQPGS-----------MAETLCGSPLYMAPEVIMS----QQYDAKADLWSIGTI 203 (429)
T ss_pred EEeccCCCC-CCCceEEecccchhhhCCchh-----------HHHHhhCCccccCHHHHHh----ccccchhhHHHHHHH
Confidence 999875221 111689999999999876422 1235679999999999975 689999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|+|++|+.||...+..++...+.++...... .+...+..+.+++...++.+|.+
T Consensus 204 lyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~-------------------------~~~~~s~~~~~Ll~~ll~~~~~~ 258 (429)
T KOG0595|consen 204 LYQCLTGKPPFDAETPKELLLYIKKGNEIVPV-------------------------LPAELSNPLRELLISLLQRNPKD 258 (429)
T ss_pred HHHHHhCCCCccccCHHHHHHHHhccccccCc-------------------------hhhhccCchhhhhhHHHhcCccc
Confidence 99999999999999999988877655431110 00122333556777777777777
Q ss_pred CCCHHHHHHHHHhhc
Q 001142 1120 RPTAGDLYEMFVART 1134 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ 1134 (1142)
|-++.+-..+.+...
T Consensus 259 ~~~~~~~~~~~~l~~ 273 (429)
T KOG0595|consen 259 RISFEDFFDHPFLAA 273 (429)
T ss_pred cCchHHhhhhhhccc
Confidence 777777666655543
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-42 Score=379.47 Aligned_cols=263 Identities=27% Similarity=0.317 Sum_probs=220.4
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
....++|++.++||+|+||.||+++. .++-+|+|+.+-+..... .+.+ .+..|..||.+++||.||+++-.|+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~-~e~~----~~~~Er~IL~~v~hPFiv~l~ysFQ 95 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK-KEVR----HTKAERNILSKIKHPFIVKLIYSFQ 95 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh-hhHH----HHHHHHHHHHhCCCCcEeeeEEecc
Confidence 45678999999999999999999987 466678887443322222 2222 3379999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+... +|+|+||+.||.|..++++ ...+++..++.++..|+.||.|||++|||||||||+||
T Consensus 96 t~~k--------------LylVld~~~GGeLf~hL~~-----eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENI 156 (357)
T KOG0598|consen 96 TEEK--------------LYLVLDYLNGGELFYHLQR-----EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENI 156 (357)
T ss_pred cCCe--------------EEEEEeccCCccHHHHHHh-----cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHe
Confidence 7664 4999999999999999986 46799999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|+|.+ |+++|+|||+++..-... ....+++||+.|||||++.+ ..|+..+|+||+|+++
T Consensus 157 LLd~~-------GHi~LtDFgL~k~~~~~~----------~~t~tfcGT~eYmAPEil~~----~gy~~~vDWWsLGill 215 (357)
T KOG0598|consen 157 LLDEQ-------GHIKLTDFGLCKEDLKDG----------DATRTFCGTPEYMAPEILLG----KGYDKAVDWWSLGILL 215 (357)
T ss_pred eecCC-------CcEEEeccccchhcccCC----------CccccccCCccccChHHHhc----CCCCcccchHhHHHHH
Confidence 99998 999999999997532211 12345789999999999987 6899999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|||++|.+||.+.+...+.+.|..+..+..+. ..+.+.++++.++|+.||++|
T Consensus 216 YeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~---------------------------~ls~~ardll~~LL~rdp~~R 268 (357)
T KOG0598|consen 216 YEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG---------------------------YLSEEARDLLKKLLKRDPRQR 268 (357)
T ss_pred HHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc---------------------------cCCHHHHHHHHHHhccCHHHh
Confidence 99999999999999889999987776433321 245568999999999999999
Q ss_pred C----CHHHHHHHHHhhcCCC
Q 001142 1121 P----TAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1121 P----Sa~EVL~~L~~~~ss~ 1137 (1142)
. ++.+|-+|+|+..-++
T Consensus 269 Lg~~~d~~~ik~HpfF~~inW 289 (357)
T KOG0598|consen 269 LGGPGDAEEIKRHPFFKGINW 289 (357)
T ss_pred cCCCCChHHhhcCcccccCCH
Confidence 4 7999999999976543
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.8e-42 Score=364.96 Aligned_cols=282 Identities=24% Similarity=0.326 Sum_probs=215.0
Q ss_pred CCcceeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+.|+...++|+|+||+||+|+++. +-||+|.+ ....+. +..+. -.++|+++|++++|||+|.++++|.....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF--~Esedd-~~VkK---IAlREIrmLKqLkH~NLVnLiEVFrrkrk 75 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKF--VESEDD-PVVKK---IALREIRMLKQLKHENLVNLIEVFRRKRK 75 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEee--ccCCcc-HHHHH---HHHHHHHHHHhcccchHHHHHHHHHhcce
Confidence 468889999999999999999854 45566554 332222 33333 35899999999999999999999986554
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
++||+|||+ .++.+-++. .+ ..++...++++++|++.|+.|+|++++|||||||+||||+.
T Consensus 76 --------------lhLVFE~~d-hTvL~eLe~---~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~ 136 (396)
T KOG0593|consen 76 --------------LHLVFEYCD-HTVLHELER---YP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQ 136 (396)
T ss_pred --------------eEEEeeecc-hHHHHHHHh---cc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEec
Confidence 499999998 455555554 22 35899999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||||||+|+.+...... ....+.|.+|+|||.+.+ ..+|++.+||||+||++.||+
T Consensus 137 ~-------gvvKLCDFGFAR~L~~pgd~----------YTDYVATRWYRaPELLvG---DtqYG~pVDiWAiGCv~aEl~ 196 (396)
T KOG0593|consen 137 N-------GVVKLCDFGFARTLSAPGDN----------YTDYVATRWYRAPELLVG---DTQYGKPVDIWAIGCVFAELL 196 (396)
T ss_pred C-------CcEEeccchhhHhhcCCcch----------hhhhhhhhhccChhhhcc---cCcCCCcccchhhhHHHHHHh
Confidence 8 89999999999987643221 224578999999999987 468999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccc-ccc--ccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH-EHE--VAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|.+.|.+.++.+....|.......++.......... ... ..+....-..+......+.-+.+|+..||+.||++|+
T Consensus 197 ~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~ 276 (396)
T KOG0593|consen 197 TGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRL 276 (396)
T ss_pred cCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccc
Confidence 9999999988888777776555444444333322211 111 1111111111122235567789999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001142 1122 TAGDLYEMFVAR 1133 (1142)
Q Consensus 1122 Sa~EVL~~L~~~ 1133 (1142)
+.+|++.|.+|.
T Consensus 277 sc~qll~H~yFd 288 (396)
T KOG0593|consen 277 SCEQLLHHPYFD 288 (396)
T ss_pred cHHHHhcChHHH
Confidence 999999999983
No 10
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-42 Score=386.36 Aligned_cols=287 Identities=23% Similarity=0.279 Sum_probs=220.7
Q ss_pred CCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~ 884 (1142)
.++|.+.++||.|+||.||+|+.....-.|+|++++......++.-+ +||+..|+++. |||||++.+.+.+.+.
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-----LREvksL~kln~hpniikL~Evi~d~~~ 83 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-----LREVKSLRKLNPHPNIIKLKEVIRDNDR 83 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-----HHHHHHHHhcCCCCcchhhHHHhhccCc
Confidence 45799999999999999999997544334555556655555554444 59999999998 9999999999887541
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
++++|||||+ .+|++++++ ++..|++..++.|+.||++||+|+|.+|+.|||+||+|||+..
T Consensus 84 -------------~L~fVfE~Md-~NLYqLmK~----R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~ 145 (538)
T KOG0661|consen 84 -------------ILYFVFEFMD-CNLYQLMKD----RNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG 145 (538)
T ss_pred -------------eEeeeHHhhh-hhHHHHHhh----cCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc
Confidence 4699999997 999999987 2568999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
. ..+||+|||+|+.+.... .....+.|.+|+|||++.. ...|+.++||||+|||++|+.
T Consensus 146 ~-------~~iKiaDFGLARev~Skp-----------PYTeYVSTRWYRAPEvLLr---s~~Ys~pvD~wA~GcI~aEl~ 204 (538)
T KOG0661|consen 146 N-------DVIKIADFGLAREVRSKP-----------PYTEYVSTRWYRAPEVLLR---SGYYSSPVDMWAVGCIMAELY 204 (538)
T ss_pred c-------ceeEecccccccccccCC-----------CcchhhhcccccchHHhhh---ccccCCchHHHHHHHHHHHHH
Confidence 5 789999999998765432 2234578999999999986 468999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhh---hcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMG-KRPRLTDELEA---LGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
+-++.|.|.++.+.+..|... ..|... .+.. .....+..+.+.. +......-...+.++.++|.+|+.+||.+|
T Consensus 205 sLrPLFPG~sE~Dqi~KIc~VLGtP~~~-~~~eg~~La~~mnf~~P~~~-~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 205 SLRPLFPGASEIDQIYKICEVLGTPDKD-SWPEGYNLASAMNFRFPQVK-PSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HhcccCCCCcHHHHHHHHHHHhCCCccc-cchhHHHHHHHhccCCCcCC-CCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 999999998887766666332 222221 1111 1111111111111 111111112467889999999999999999
Q ss_pred CCHHHHHHHHHhhcCCCC
Q 001142 1121 PTAGDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ss~~ 1138 (1142)
|||.|+++|+|++.....
T Consensus 283 pTA~~al~~pffq~~~~~ 300 (538)
T KOG0661|consen 283 PTASQALQHPFFQVGRAS 300 (538)
T ss_pred ccHHHHhcCccccccccc
Confidence 999999999999866444
No 11
>PF14381 EDR1: Ethylene-responsive protein kinase Le-CTR1
Probab=100.00 E-value=3e-42 Score=362.45 Aligned_cols=184 Identities=36% Similarity=0.523 Sum_probs=146.6
Q ss_pred ccccccccccccccccCCCCCccccCCCCC----------ccccccccccC-CCCCcceEEEEcccCCHHHHHHHHHHHH
Q 001142 521 SNASQKYSSVSFCSIEDRLPDGFYDAGRDR----------PFMQLTGYEQT-PHLDSREVILVDRKSDEELDAIALSAQA 589 (1142)
Q Consensus 521 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 589 (1142)
..+|||||++|+|+|+|||||||||++++. .+-+|++++.. +.++++|||||||..|+.|++|+++|+.
T Consensus 4 e~lS~r~W~~~~L~y~dki~DGFYdi~g~~~~~~l~~~~~~~Psl~~L~~~~~~~~~~EvIlVDr~~D~~L~~L~~~a~~ 83 (204)
T PF14381_consen 4 ESLSHRYWVNGCLSYDDKIPDGFYDIYGMDCTNSLKEEFGRMPSLEDLQAVPPDDSSREVILVDRRRDPSLKELEQRAHE 83 (204)
T ss_pred HHHHHHHHHcCCCCCCCcCCCCCcccccCCCccccccccCCCCCHHHHhcCCCCCCCeeEEEEccccCHHHHHHHHHHHH
Confidence 468999999999999999999999886652 11225555543 6899999999999999999999999999
Q ss_pred HHHHhhccCCccccCcccccchHHHHHHHHHHhhhccCCCcCCcccccccccccCCCCCCCcccccCCCCCCCcchhhhH
Q 001142 590 LVLHLKQLNGLTKDGVIEPVDNLQIALLLALFVSDHFGGSDRSGIVERTRKTVSGSNYRKPFVCTCSTGNSDSANTSQKQ 669 (1142)
Q Consensus 590 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 669 (1142)
+...+. .+..+++.+||.+|+++|||++..++ .
T Consensus 84 ~~~~~~-------------~~~~~~v~~LA~lVa~~MGG~~~~~~----------------------------------~ 116 (204)
T PF14381_consen 84 LSKGLS-------------TNTKELVQKLAKLVADRMGGPVSDAE----------------------------------D 116 (204)
T ss_pred HHhccc-------------cCHHHHHHHHHHHHHHHhCCCCCcch----------------------------------h
Confidence 997631 13578899999999999999984432 1
Q ss_pred hhhHHHHHHhhhHHHHHHHHHhhccCceeEeccccccchhhhHHHHHHHhhhccCCCCcccccccccccCC-CccceeEE
Q 001142 670 ILDAVEDIVLSDLCEKSLRSIKSKRNSVVVPIGSVQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDFQP-HAWNTILV 748 (1142)
Q Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~~~-~~~~~~~~ 748 (1142)
...+ |+...+.+|. ++.+||||+|++|+|||||||||+|||+|+ ||||||||++||+. ..-+.++|
T Consensus 117 ~~~~---------w~~~s~~lk~--~s~~vplG~l~~G~~rhRALLFKvLAD~ig--lpCrLvrG~~y~g~~~~~a~~~V 183 (204)
T PF14381_consen 117 MLFR---------WELRSEKLKE--NSGVVPLGSLRIGLCRHRALLFKVLADRIG--LPCRLVRGCYYCGWDDDDASNLV 183 (204)
T ss_pred hhHH---------HHHHHHHHHh--CCCeEEEeeecccchHHHHHHHHHHHHhcC--CCceEEeeccCCccCCCCceEEE
Confidence 1113 3455555666 999999999999999999999999999999 99999999999987 33344566
Q ss_pred eeCCchhhhhhhhcC-CC
Q 001142 749 KKGDSWIRMIVDACR-PH 765 (1142)
Q Consensus 749 ~~~~~~~~~~~~~~~-~~ 765 (1142)
+.++ .+++++|.+. |+
T Consensus 184 ~~~~-~~eyiVDLm~~PG 200 (204)
T PF14381_consen 184 KFDD-GREYIVDLMGAPG 200 (204)
T ss_pred EcCC-CcEEEEEcCCCCC
Confidence 6654 5678888874 44
No 12
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=371.38 Aligned_cols=276 Identities=25% Similarity=0.374 Sum_probs=225.8
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+....+|++.++||.|..++||+|+. .+..||+|+..++..... .+.+ .+|+..|+.++||||++++..|.
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~---ld~l----~kE~~~msl~~HPNIv~~~~sFv 94 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND---LDAL----RKEVQTMSLIDHPNIVTYHCSFV 94 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh---HHHH----HHHHHHhhhcCCCCcceEEEEEE
Confidence 34456899999999999999999998 567888998887765322 4444 79999999999999999999999
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
.+..+ |+||.||.+||+.++++..+..+ +++..+..|++++++||.|||.+|.||||||+.||
T Consensus 95 v~~~L--------------WvVmpfMa~GS~ldIik~~~~~G---l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnI 157 (516)
T KOG0582|consen 95 VDSEL--------------WVVMPFMAGGSLLDIIKTYYPDG---LEEASIATILREVLKALDYLHQNGHIHRDVKAGNI 157 (516)
T ss_pred eccee--------------EEeehhhcCCcHHHHHHHHcccc---ccHHHHHHHHHHHHHHHHHHHhcCceecccccccE
Confidence 87755 99999999999999999877655 99999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCC-CCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAP-DVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~-~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||+.+ |.|||+|||.+..+......+ ... .+++||++|||||++... ...|+.|+||||||++
T Consensus 158 Li~~d-------G~VkLadFgvsa~l~~~G~R~-------~~rf~tfvgtp~wmAPEvl~q~--~~GYdfKaDIwSfGIT 221 (516)
T KOG0582|consen 158 LIDSD-------GTVKLADFGVSASLFDSGDRQ-------VTRFNTFVGTPCWMAPEVLMQQ--LHGYDFKADIWSFGIT 221 (516)
T ss_pred EEcCC-------CcEEEcCceeeeeecccCcee-------eEeeccccCcccccChHHhhhc--ccCccchhhhhhhhHH
Confidence 99998 899999999887654422110 111 567899999999997553 3679999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
..||++|..||....+.++.-.-.++.+|.+.. . ....+.....+..+++++..||+.||.+
T Consensus 222 A~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t--~----------------~~~~d~~k~~~ksf~e~i~~CL~kDP~k 283 (516)
T KOG0582|consen 222 ACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLT--S----------------GLDKDEDKKFSKSFREMIALCLVKDPSK 283 (516)
T ss_pred HHHHhcCCCCcccCChHHHHHHHhcCCCCCccc--c----------------cCChHHhhhhcHHHHHHHHHHhhcCccc
Confidence 999999999999988888765545555442220 0 0011112245568999999999999999
Q ss_pred CCCHHHHHHHHHhhcCC
Q 001142 1120 RPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ss 1136 (1142)
||||+++++|.||+..-
T Consensus 284 RptAskLlkh~FFk~~k 300 (516)
T KOG0582|consen 284 RPTASKLLKHAFFKKAK 300 (516)
T ss_pred CCCHHHHhccHHHhhcc
Confidence 99999999999998653
No 13
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-41 Score=389.73 Aligned_cols=259 Identities=28% Similarity=0.457 Sum_probs=217.5
Q ss_pred CCcceeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..|...++||+|+.|.||.|.... ..||+|.+.+... .. ++ .+..|+.+|+..+|+|||.+++.|...+
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q--~~---ke---LilnEi~Vm~~~~H~NiVnfl~Sylv~d- 343 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ--PK---KE---LLLNEILVMRDLHHPNIVNFLDSYLVGD- 343 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccC--Cc---hh---hhHHHHHHHHhccchHHHHHHHHhcccc-
Confidence 357888999999999999998744 4455555444432 21 12 2379999999999999999999887654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.+|+||||++||+|.+.+.. ..+++.++..|++++++||+|||.+||+|||||.+|||++.
T Consensus 344 -------------eLWVVMEym~ggsLTDvVt~------~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~ 404 (550)
T KOG0578|consen 344 -------------ELWVVMEYMEGGSLTDVVTK------TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTM 404 (550)
T ss_pred -------------eeEEEEeecCCCchhhhhhc------ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEecc
Confidence 35999999999999999976 35999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++..+.... ......+|||+|||||++.. ..|++|+||||||++++||+
T Consensus 405 ~-------g~vKltDFGFcaqi~~~~----------~KR~TmVGTPYWMAPEVvtr----k~YG~KVDIWSLGIMaIEMv 463 (550)
T KOG0578|consen 405 D-------GSVKLTDFGFCAQISEEQ----------SKRSTMVGTPYWMAPEVVTR----KPYGPKVDIWSLGIMAIEMV 463 (550)
T ss_pred C-------CcEEEeeeeeeecccccc----------CccccccCCCCccchhhhhh----cccCccccchhhhhHHHHHh
Confidence 8 789999999998765422 24557899999999999986 78999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
-|.+||...++......|.....|.+... ...++.+++|+.+||+.||.+||+|.
T Consensus 464 eGEPPYlnE~PlrAlyLIa~ng~P~lk~~-------------------------~klS~~~kdFL~~cL~~dv~~RasA~ 518 (550)
T KOG0578|consen 464 EGEPPYLNENPLRALYLIATNGTPKLKNP-------------------------EKLSPELKDFLDRCLVVDVEQRASAK 518 (550)
T ss_pred cCCCCccCCChHHHHHHHhhcCCCCcCCc-------------------------cccCHHHHHHHHHHhhcchhcCCCHH
Confidence 99999998888877778876666654421 15677899999999999999999999
Q ss_pred HHHHHHHhhcCCCCC
Q 001142 1125 DLYEMFVARTSSSIS 1139 (1142)
Q Consensus 1125 EVL~~L~~~~ss~~s 1139 (1142)
|+|+|+|++...+.+
T Consensus 519 eLL~HpFl~~a~p~s 533 (550)
T KOG0578|consen 519 ELLEHPFLKMAKPES 533 (550)
T ss_pred HHhcChhhhhcCCHH
Confidence 999999998765543
No 14
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-41 Score=382.12 Aligned_cols=271 Identities=24% Similarity=0.271 Sum_probs=221.3
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 879 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~ 879 (1142)
..+..+|.+++.||+|+|++|++|+. .+..+|+||. .+...-.. .-...+.+|-.+|.+| .||.||++|..|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl--~K~~Iike---~KvkYV~~Ek~~l~~L~~hPgivkLy~TF 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVL--DKRYIIKE---KKVKYVTREKEALTQLSGHPGIVKLYFTF 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhh--hHHHHHhh---cccchhhHHHHHHHHhhCCCCeEEEEEEe
Confidence 56788999999999999999999987 4667888873 32211111 1112346888999999 799999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.++..+ |+|+||+++|+|.++|++ .+.|++..++.++.||+.||+|||++|||||||||+|
T Consensus 144 QD~~sL--------------YFvLe~A~nGdll~~i~K-----~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPEN 204 (604)
T KOG0592|consen 144 QDEESL--------------YFVLEYAPNGDLLDLIKK-----YGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPEN 204 (604)
T ss_pred ecccce--------------EEEEEecCCCcHHHHHHH-----hCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhh
Confidence 987655 999999999999999998 3579999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccc---cccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCC---IAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1036 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~---~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSL 1036 (1142)
||+|.+ +++||.|||.|+.+........ ...........++||..|.+||++.. ...++.+|+|||
T Consensus 205 ILLd~d-------mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~----~~~~~~sDiWAl 273 (604)
T KOG0592|consen 205 ILLDKD-------GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND----SPAGPSSDLWAL 273 (604)
T ss_pred eeEcCC-------CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcC----CCCCcccchHHH
Confidence 999998 8999999999998765432211 00001111256899999999999987 677899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1037 GCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1037 GviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
|||||+|+.|++||.+.++.-+++.|........ ...++.+++|++++|..|
T Consensus 274 GCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp----------------------------~~fp~~a~dLv~KLLv~d 325 (604)
T KOG0592|consen 274 GCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP----------------------------EGFPEDARDLIKKLLVRD 325 (604)
T ss_pred HHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC----------------------------CCCCHHHHHHHHHHHccC
Confidence 9999999999999999888888888765432111 144567999999999999
Q ss_pred CCCCCCHHHHHHHHHhhcCC
Q 001142 1117 PTERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~~ss 1136 (1142)
|.+|+|+.||-+|+||..-.
T Consensus 326 p~~Rlt~~qIk~HpFF~~Vd 345 (604)
T KOG0592|consen 326 PSDRLTSQQIKAHPFFEGVD 345 (604)
T ss_pred ccccccHHHHhhCcccccCC
Confidence 99999999999999997653
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=5.4e-40 Score=346.78 Aligned_cols=289 Identities=21% Similarity=0.225 Sum_probs=222.0
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|...++||+|+||+||+|++. ++.||+|-.++.. ..+.+...+.+|+..|+.++|+||+.++++|...+.
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~------~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~ 75 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGN------AKDGINRTALREIKLLQELKHPNIIELIDVFPHKSN 75 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccc------cccCccHHHHHHHHHHHHccCcchhhhhhhccCCCc
Confidence 46888999999999999999985 4455555444332 222333455899999999999999999999986554
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+ .||+||++ .+|+..|++ ....++..+++.++.++++||+|||++.|+||||||.|+|++.
T Consensus 76 l--------------~lVfEfm~-tdLe~vIkd----~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~ 136 (318)
T KOG0659|consen 76 L--------------SLVFEFMP-TDLEVVIKD----KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISS 136 (318)
T ss_pred e--------------EEEEEecc-ccHHHHhcc----cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcC
Confidence 3 89999998 899999986 3467999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+|+.+...... ....+-|..|+|||.+.| ...|+..+||||.|||+.||+
T Consensus 137 ~-------g~lKiADFGLAr~f~~p~~~----------~~~~V~TRWYRAPELLfG---sr~Yg~~VDmWavGCI~AELl 196 (318)
T KOG0659|consen 137 D-------GQLKIADFGLARFFGSPNRI----------QTHQVVTRWYRAPELLFG---SRQYGTGVDMWAVGCIFAELL 196 (318)
T ss_pred C-------CcEEeecccchhccCCCCcc----------cccceeeeeccChHHhcc---chhcCCcchhhhHHHHHHHHH
Confidence 8 89999999999887654322 112367999999999998 468999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
-|.+-|.+.++.+....|...-..+.++.++......+....+..........-...+.++.+|+..||..||.+|+|+.
T Consensus 197 lr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~ 276 (318)
T KOG0659|consen 197 LRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITAS 276 (318)
T ss_pred ccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHH
Confidence 99998999888887777744433333333333332222221111110000001124566779999999999999999999
Q ss_pred HHHHHHHhhcCCCCCC
Q 001142 1125 DLYEMFVARTSSSISS 1140 (1142)
Q Consensus 1125 EVL~~L~~~~ss~~s~ 1140 (1142)
|+++|.||......+.
T Consensus 277 qaL~~~yf~~~P~pt~ 292 (318)
T KOG0659|consen 277 QALKHPYFKSLPLPTP 292 (318)
T ss_pred HHhcchhhhcCCCCCC
Confidence 9999999997655443
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.5e-40 Score=374.71 Aligned_cols=295 Identities=21% Similarity=0.243 Sum_probs=226.1
Q ss_pred CCCCCCCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccce
Q 001142 798 CSGLDPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 875 (1142)
Q Consensus 798 ~~~~~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl 875 (1142)
...+.+...+.|+..++||+|+||.||+|++. +..||+|-++++... .+|...+.+||.||++|.|||||++
T Consensus 108 ~~~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~------~~~~~t~~REI~ILr~l~HpNIikL 181 (560)
T KOG0600|consen 108 LHGWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK------EGFPITAIREIKILRRLDHPNIIKL 181 (560)
T ss_pred cccccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC------CcchHHHHHHHHHHHhcCCCcccce
Confidence 34667777888999999999999999999985 445777765554321 2333445799999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 955 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDL 955 (1142)
.+...+... ..+|||+|||+ .+|.-++.. +...|++.+++.++.||+.||+|||.+||+||||
T Consensus 182 ~eivt~~~~------------~siYlVFeYMd-hDL~GLl~~----p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDI 244 (560)
T KOG0600|consen 182 EEIVTSKLS------------GSIYLVFEYMD-HDLSGLLSS----PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDI 244 (560)
T ss_pred eeEEEecCC------------ceEEEEEeccc-chhhhhhcC----CCcccChHHHHHHHHHHHHHHHHHhhcCeeeccc
Confidence 999887521 14599999998 888888764 4568999999999999999999999999999999
Q ss_pred CCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001142 956 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1035 (1142)
Q Consensus 956 Kp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwS 1035 (1142)
|.+|||||.+ +.+||+|||+|+.+...... .....+.|.+|+|||.+.+ ...|+.++|+||
T Consensus 245 K~SNiLidn~-------G~LKiaDFGLAr~y~~~~~~---------~~T~rVvTLWYRpPELLLG---~t~Yg~aVDlWS 305 (560)
T KOG0600|consen 245 KGSNILIDNN-------GVLKIADFGLARFYTPSGSA---------PYTSRVVTLWYRPPELLLG---ATSYGTAVDLWS 305 (560)
T ss_pred cccceEEcCC-------CCEEeccccceeeccCCCCc---------ccccceEEeeccChHHhcC---Ccccccceeehh
Confidence 9999999988 89999999999876543211 1335678999999999998 468999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCC--chhhhhhHHHHHHHHHHhc
Q 001142 1036 YGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK--PEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1036 LGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~dLI~~CL 1113 (1142)
.||||.||++|++.|++.++.+..+.|......+-...|... ........+....+.. .+.-...+....+|+..+|
T Consensus 306 ~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~-kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL 384 (560)
T KOG0600|consen 306 VGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS-KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLL 384 (560)
T ss_pred hhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc-cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHh
Confidence 999999999999999999888888777443322222222210 0011111111111111 1111245677899999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhcC
Q 001142 1114 EENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
..||.+|.||.++|++-||...
T Consensus 385 ~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 385 SLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred ccCccccccHHHHhcCcccccC
Confidence 9999999999999999999544
No 17
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=369.01 Aligned_cols=264 Identities=33% Similarity=0.443 Sum_probs=206.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|...+.||+|+||+||++... +...|||...+.. ....+.+ .+|+.+|.+++|||||+++|......
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~----~~~~~~l----~~Ei~iL~~l~~p~IV~~~G~~~~~~ 87 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELED----SPTSESL----EREIRILSRLNHPNIVQYYGSSSSRE 87 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeeccc----chhHHHH----HHHHHHHHhCCCCCEEeeCCcccccc
Confidence 456899999999999999999985 5788999865541 1113333 79999999999999999999754322
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. ..++++|||+++|||.+++.+ .+. .+++..++++++||+.||.|||++|||||||||+|||++
T Consensus 88 ~------------~~~~i~mEy~~~GsL~~~~~~---~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~ 151 (313)
T KOG0198|consen 88 N------------DEYNIFMEYAPGGSLSDLIKR---YGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD 151 (313)
T ss_pred C------------eeeEeeeeccCCCcHHHHHHH---cCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe
Confidence 1 245999999999999999987 233 699999999999999999999999999999999999999
Q ss_pred c-ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 964 L-ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 964 ~-~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
. + +.+||+|||+++...... . .........||+.|||||++.. +....+++|||||||++.|
T Consensus 152 ~~~-------~~~KlaDFG~a~~~~~~~-~------~~~~~~~~~Gtp~~maPEvi~~---g~~~~~~sDiWSlGCtVvE 214 (313)
T KOG0198|consen 152 PSN-------GDVKLADFGLAKKLESKG-T------KSDSELSVQGTPNYMAPEVIRN---GEVARRESDIWSLGCTVVE 214 (313)
T ss_pred CCC-------CeEEeccCcccccccccc-c------cccccccccCCccccCchhhcC---CCcCCccchhhhcCCEEEe
Confidence 8 4 789999999997655311 0 0112235679999999999984 1223369999999999999
Q ss_pred HHhCCCCCCCC-CHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1043 LLTLQVPYMGL-SELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1043 LLtG~~Pf~~~-~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+||+.||... ...+..-.+ .....|.++ ...++..++|+.+|++.||++|
T Consensus 215 M~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip---------------------------~~ls~~a~~Fl~~C~~~~p~~R 267 (313)
T KOG0198|consen 215 MLTGKPPWSEFFEEAEALLLIGREDSLPEIP---------------------------DSLSDEAKDFLRKCFKRDPEKR 267 (313)
T ss_pred ccCCCCcchhhcchHHHHHHHhccCCCCCCC---------------------------cccCHHHHHHHHHHhhcCcccC
Confidence 99999999862 323222222 222222222 1456779999999999999999
Q ss_pred CCHHHHHHHHHhhcCCC
Q 001142 1121 PTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ss~ 1137 (1142)
|||+++|+|+|.+....
T Consensus 268 pta~eLL~hpf~~~~~~ 284 (313)
T KOG0198|consen 268 PTAEELLEHPFLKQNSI 284 (313)
T ss_pred cCHHHHhhChhhhcccc
Confidence 99999999999986543
No 18
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-40 Score=352.10 Aligned_cols=260 Identities=26% Similarity=0.342 Sum_probs=220.6
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+..+++|++.+.||.|+||.|.+++. .+..+|+|+...... ....+.+ ...+|..+|+.+.||+++++++.+.
T Consensus 40 ~~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v-VklKQve----H~~nEk~vL~~v~~PFlv~l~~t~~ 114 (355)
T KOG0616|consen 40 PYSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV-VKLKQVE----HTHNEKRVLKAVSHPFLVKLYGTFK 114 (355)
T ss_pred CcchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHH-HHHHHHH----HHhhHHHHHhhccCceeEEEEEeec
Confidence 47789999999999999999999987 566788887432211 1112222 3378999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+. +|+||||++||-|.+++++ ..++++..++.++.||+.||+|||+.+|++|||||+||
T Consensus 115 d~~~--------------lymvmeyv~GGElFS~Lrk-----~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENi 175 (355)
T KOG0616|consen 115 DNSN--------------LYMVMEYVPGGELFSYLRK-----SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENL 175 (355)
T ss_pred cCCe--------------EEEEEeccCCccHHHHHHh-----cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHe
Confidence 7664 4999999999999999987 35799999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|+|.+ |.+||.|||+|+..... + -+.+|||.|+|||++.. .+|+.++|.|||||++
T Consensus 176 LlD~~-------G~iKitDFGFAK~v~~r--T-----------~TlCGTPeYLAPEii~s----k~ynkavDWWalGVLI 231 (355)
T KOG0616|consen 176 LLDQN-------GHIKITDFGFAKRVSGR--T-----------WTLCGTPEYLAPEIIQS----KGYNKAVDWWALGVLI 231 (355)
T ss_pred eeccC-------CcEEEEeccceEEecCc--E-----------EEecCCccccChHHhhc----CCCCcchhHHHHHHHH
Confidence 99998 89999999999876543 1 24579999999999987 7899999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|||+.|.+||...++.++++.|..+...-.. ..+.++++|+..+|+.|-.+|
T Consensus 232 YEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~----------------------------~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 232 YEMLAGYPPFYDDNPIQIYEKILEGKVKFPS----------------------------YFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HHHHcCCCCCcCCChHHHHHHHHhCcccCCc----------------------------ccCHHHHHHHHHHHhhhhHhh
Confidence 9999999999999999999999776532111 345569999999999999999
Q ss_pred -----CCHHHHHHHHHhhcCCCC
Q 001142 1121 -----PTAGDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1121 -----PSa~EVL~~L~~~~ss~~ 1138 (1142)
....+|..|+||+...+.
T Consensus 284 ~gnlknG~~dIk~H~wF~~v~W~ 306 (355)
T KOG0616|consen 284 FGNLKNGVEDIKNHPWFKGVDWE 306 (355)
T ss_pred hcCcCCCccccccCcccccccHH
Confidence 567899999999876553
No 19
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.2e-40 Score=354.50 Aligned_cols=290 Identities=25% Similarity=0.313 Sum_probs=225.0
Q ss_pred CCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
..+++.|+...+|++|+||.||+|+++.+...|++++++.. .+...|....++||.+|.+++|||||.+-.++...
T Consensus 72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kme----kek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~ 147 (419)
T KOG0663|consen 72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKME----KEKEGFPITSLREINILLKARHPNIVEVKEVVVGS 147 (419)
T ss_pred cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccc----cccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc
Confidence 46788899999999999999999999766655555555532 23445555668999999999999999999998764
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+ ....|||||||+ .+|.+++... ..+|...+++.++.|+++|++|||.+.|+|||||++|+|+
T Consensus 148 ~------------~d~iy~VMe~~E-hDLksl~d~m----~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm 210 (419)
T KOG0663|consen 148 N------------MDKIYIVMEYVE-HDLKSLMETM----KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL 210 (419)
T ss_pred c------------cceeeeeHHHHH-hhHHHHHHhc----cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee
Confidence 4 224699999998 8999999873 2579999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.. |.+||+|||+|+.+...... ....+-|.+|+|||.+.+ ...|+.++|+||+|||+.|
T Consensus 211 ~~~-------G~lKiaDFGLAR~ygsp~k~----------~T~lVVTLWYRaPELLLG---~~tyst~iDMWSvGCI~aE 270 (419)
T KOG0663|consen 211 SHK-------GILKIADFGLAREYGSPLKP----------YTPLVVTLWYRAPELLLG---AKTYSTAVDMWSVGCIFAE 270 (419)
T ss_pred ccC-------CcEEecccchhhhhcCCccc----------CcceEEEeeecCHHHhcC---CcccCcchhhhhHHHHHHH
Confidence 887 89999999999987764322 234568999999999998 4679999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccc--------cccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH--------EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1114 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~ 1114 (1142)
|+++++.|.+.+..+..+.|......+....++...... ..........+.. ...++.-.+|+..+|.
T Consensus 271 ~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~----~~lse~g~~Lln~llt 346 (419)
T KOG0663|consen 271 LLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGA----LSLSEQGFDLLNKLLT 346 (419)
T ss_pred HHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccc----cccchhHHHHHHHHhc
Confidence 999999999998888777774322221111111111111 0011111111111 1145778999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcCCC
Q 001142 1115 ENPTERPTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1115 ~DP~~RPSa~EVL~~L~~~~ss~ 1137 (1142)
+||.+|.||.|.|+|-||....-
T Consensus 347 ~dP~kR~tA~~~L~h~~F~e~P~ 369 (419)
T KOG0663|consen 347 YDPGKRITAEDGLKHEYFRETPL 369 (419)
T ss_pred cCccccccHHHhhcccccccCCC
Confidence 99999999999999999987543
No 20
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-39 Score=372.34 Aligned_cols=263 Identities=23% Similarity=0.274 Sum_probs=214.0
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 880 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~ 880 (1142)
.....|.+.+.||+|+||+|++|.+ .+..+|+|+..-+...... ......+.+|+.++++++ ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~---~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~ 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS---QKLDELIKREISILRRLRSHPNIIRLLEVFA 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc---cccchhhHHHHHHHHHhccCCCEeEEEEEEe
Confidence 3466899999999999999999987 5678899975433211111 122233468999999998 999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
.... .++||||+.||+|.+++.+ ..++.+.++.++++|++.|++|||++||+||||||+||
T Consensus 91 t~~~--------------~~ivmEy~~gGdL~~~i~~-----~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENi 151 (370)
T KOG0583|consen 91 TPTK--------------IYIVMEYCSGGDLFDYIVN-----KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENI 151 (370)
T ss_pred cCCe--------------EEEEEEecCCccHHHHHHH-----cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHE
Confidence 7653 4999999999999999986 45789999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+. +++||+|||++..... ........+||+.|+|||++.+.. ..-+.++||||+||+|
T Consensus 152 lld~~~------~~~Kl~DFG~s~~~~~----------~~~~l~t~cGsp~Y~aPEvl~~~~--~Y~g~~aDvWS~GViL 213 (370)
T KOG0583|consen 152 LLDGNE------GNLKLSDFGLSAISPG----------EDGLLKTFCGSPAYAAPEVLSGKG--TYSGKAADVWSLGVIL 213 (370)
T ss_pred EecCCC------CCEEEeccccccccCC----------CCCcccCCCCCcccCCHHHhCCCC--CcCCchhhhhhhHHHH
Confidence 998762 6799999999976521 111334678999999999998721 1336899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhh-HHHHHHHHHHhcccCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET-LSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~dLI~~CL~~DP~~ 1119 (1142)
|.|++|+.||.......++..|..+...-.. .. +.++.+++.+||..||.+
T Consensus 214 y~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~----------------------------~~~S~~~~~Li~~mL~~~P~~ 265 (370)
T KOG0583|consen 214 YVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS----------------------------YLLSPEARSLIEKMLVPDPST 265 (370)
T ss_pred HHHHhCCCCCCCccHHHHHHHHhcCCccCCC----------------------------CcCCHHHHHHHHHHcCCCccc
Confidence 9999999999987777777777655432111 22 567999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001142 1120 RPTAGDLYEMFVART 1134 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ 1134 (1142)
|+|+.++++|+|++.
T Consensus 266 R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 266 RITLLEILEHPWFQK 280 (370)
T ss_pred CCCHHHHhhChhhcc
Confidence 999999999999997
No 21
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1e-39 Score=370.85 Aligned_cols=256 Identities=27% Similarity=0.394 Sum_probs=217.7
Q ss_pred CCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
++|.+.+.||+|+||.||+|+.+.+...|+++.+.+......+.+.+ .+|++|+++++|||||.++++|+....
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l----~~ev~i~r~lkHpniv~m~esfEt~~~-- 75 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNL----RQEVRILRSLKHPNIVEMLESFETSAH-- 75 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHH----HHHHHHHHhcCCcchhhHHHhhcccce--
Confidence 57899999999999999999986655555555566666666677776 899999999999999999999998764
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
+|+|+||+. |+|..++.. +..++++.++.|+.|++.||.|||+++|+|||+||.|||++..
T Consensus 76 ------------~~vVte~a~-g~L~~il~~-----d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~- 136 (808)
T KOG0597|consen 76 ------------LWVVTEYAV-GDLFTILEQ-----DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKG- 136 (808)
T ss_pred ------------EEEEehhhh-hhHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCC-
Confidence 499999998 599999987 5679999999999999999999999999999999999999987
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+++|+||||+|+.+.... .......|||.|||||...+ .+|+..+|+||+|||+|||++|
T Consensus 137 ------~~~KlcdFg~Ar~m~~~t----------~vltsikGtPlYmAPElv~e----~pyd~~sDlWslGcilYE~~~G 196 (808)
T KOG0597|consen 137 ------GTLKLCDFGLARAMSTNT----------SVLTSIKGTPLYMAPELVEE----QPYDHTSDLWSLGCILYELYVG 196 (808)
T ss_pred ------CceeechhhhhhhcccCc----------eeeeeccCcccccCHHHHcC----CCccchhhHHHHHHHHHHHhcC
Confidence 899999999998765422 12234569999999999986 7899999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
++||...+..++...|.....++.. ..+..+..+++..|..||.+|.|-.++
T Consensus 197 ~PPF~a~si~~Lv~~I~~d~v~~p~----------------------------~~S~~f~nfl~gLL~kdP~~RltW~~L 248 (808)
T KOG0597|consen 197 QPPFYARSITQLVKSILKDPVKPPS----------------------------TASSSFVNFLQGLLIKDPAQRLTWTDL 248 (808)
T ss_pred CCCchHHHHHHHHHHHhcCCCCCcc----------------------------cccHHHHHHHHHHhhcChhhcccHHHH
Confidence 9999887777777777554332211 455679999999999999999999999
Q ss_pred HHHHHhhcC
Q 001142 1127 YEMFVARTS 1135 (1142)
Q Consensus 1127 L~~L~~~~s 1135 (1142)
+.|+|.+..
T Consensus 249 l~HpF~k~~ 257 (808)
T KOG0597|consen 249 LGHPFWKGK 257 (808)
T ss_pred hcChHHhhh
Confidence 999887643
No 22
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-39 Score=371.41 Aligned_cols=253 Identities=28% Similarity=0.438 Sum_probs=213.1
Q ss_pred CcceeeeecccCceEEEEEEECCc-cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGSA-DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~~-~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
.+++.+.||+|-||.||.|.|++. +||+|..+.. . ...+.| .+|+++|++|+|+|||+++|++..++.+
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--~---m~~~~f----~~Ea~iMk~L~H~~lV~l~gV~~~~~pi- 276 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--S---MSPEAF----LREAQIMKKLRHEKLVKLYGVCTKQEPI- 276 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc--c---cChhHH----HHHHHHHHhCcccCeEEEEEEEecCCce-
Confidence 368999999999999999999766 8999986533 1 222344 7899999999999999999999875533
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
+|||||++.|+|.++++. .....+...+.+.++.|||.|++||+++++|||||-+.||||+.+
T Consensus 277 -------------yIVtE~m~~GsLl~yLr~---~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~- 339 (468)
T KOG0197|consen 277 -------------YIVTEYMPKGSLLDYLRT---REGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDED- 339 (468)
T ss_pred -------------EEEEEecccCcHHHHhhh---cCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccC-
Confidence 999999999999999986 345679999999999999999999999999999999999999988
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT- 1045 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt- 1045 (1142)
..+||+|||+|+...+...+. ....--...|.|||.+.. ..++.|+|||||||+||||+|
T Consensus 340 ------~~vKIsDFGLAr~~~d~~Y~~---------~~~~kfPIkWtAPEa~~~----~~FS~kSDVWSFGVlL~E~fT~ 400 (468)
T KOG0197|consen 340 ------LVVKISDFGLARLIGDDEYTA---------SEGGKFPIKWTAPEALNY----GKFSSKSDVWSFGVLLWELFTY 400 (468)
T ss_pred ------ceEEEcccccccccCCCceee---------cCCCCCCceecCHHHHhh----CCcccccceeehhhhHHHHhcc
Confidence 799999999999544332211 111123457999999986 679999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||.+.+..++.+.+.+|.+.+-+. .+++.+.+++..||+.+|++|||++.
T Consensus 401 G~~py~~msn~ev~~~le~GyRlp~P~---------------------------~CP~~vY~lM~~CW~~~P~~RPtF~~ 453 (468)
T KOG0197|consen 401 GRVPYPGMSNEEVLELLERGYRLPRPE---------------------------GCPDEVYELMKSCWHEDPEDRPTFET 453 (468)
T ss_pred CCCCCCCCCHHHHHHHHhccCcCCCCC---------------------------CCCHHHHHHHHHHhhCCcccCCCHHH
Confidence 999999999999999998887654332 67888999999999999999999998
Q ss_pred HHHHHHhh
Q 001142 1126 LYEMFVAR 1133 (1142)
Q Consensus 1126 VL~~L~~~ 1133 (1142)
+...+...
T Consensus 454 L~~~l~~~ 461 (468)
T KOG0197|consen 454 LREVLEDF 461 (468)
T ss_pred HHHHHHHh
Confidence 77665443
No 23
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-41 Score=348.73 Aligned_cols=263 Identities=26% Similarity=0.341 Sum_probs=218.6
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+.|++.++||+|+|+.||++.+ .++.+|+|+...++.... ..+++ .+|++|++.|+|||||++.+.+.+..+
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~--~~e~l----~rEarIC~~LqHP~IvrL~~ti~~~~~ 84 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKL----EREARICRKLQHPNIVRLHDSIQEESF 84 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc--cHHHH----HHHHHHHHhcCCCcEeehhhhhcccce
Confidence 4689999999999999999877 577888998666554333 34444 799999999999999999998887664
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. |||+|++.|++|..-|-. +..+++..+-.+++||+.+|.|+|.+||||||+||+|+++-.
T Consensus 85 ~--------------ylvFe~m~G~dl~~eIV~-----R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLAS 145 (355)
T KOG0033|consen 85 H--------------YLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLAS 145 (355)
T ss_pred e--------------EEEEecccchHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeee
Confidence 4 999999999999766544 246899999999999999999999999999999999999965
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
.. ...-+||+|||+|..+.... .-..++|||.|||||++.. .+|+..+|||+.|||||-|+
T Consensus 146 K~----~~A~vKL~~FGvAi~l~~g~-----------~~~G~~GtP~fmaPEvvrk----dpy~kpvDiW~cGViLfiLL 206 (355)
T KOG0033|consen 146 KA----KGAAVKLADFGLAIEVNDGE-----------AWHGFAGTPGYLSPEVLKK----DPYSKPVDIWACGVILYILL 206 (355)
T ss_pred cc----CCCceeecccceEEEeCCcc-----------ccccccCCCcccCHHHhhc----CCCCCcchhhhhhHHHHHHH
Confidence 42 23679999999998776322 1235689999999999986 68999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
.|.+||.+.+...+++.|..+...-....++ ..+++.++|+++||..||++|.|+.
T Consensus 207 ~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~------------------------~is~~Ak~LvrrML~~dP~kRIta~ 262 (355)
T KOG0033|consen 207 VGYPPFWDEDQHRLYEQIKAGAYDYPSPEWD------------------------TVTPEAKSLIRRMLTVNPKKRITAD 262 (355)
T ss_pred hCCCCCCCccHHHHHHHHhccccCCCCcccC------------------------cCCHHHHHHHHHHhccChhhhccHH
Confidence 9999999988888999998776432221111 5567799999999999999999999
Q ss_pred HHHHHHHhhcCCC
Q 001142 1125 DLYEMFVARTSSS 1137 (1142)
Q Consensus 1125 EVL~~L~~~~ss~ 1137 (1142)
|+|+|+|......
T Consensus 263 EAL~HpWi~~r~~ 275 (355)
T KOG0033|consen 263 EALKHPWICNRER 275 (355)
T ss_pred HHhCCchhcchHH
Confidence 9999999986543
No 24
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.7e-39 Score=367.61 Aligned_cols=272 Identities=23% Similarity=0.316 Sum_probs=216.2
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCC-ChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGS-SADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
++++|++.++||+|+||.||+|+. .+..+|+|+. ++... ...+.+.+ +.|-.+|....+|+||++|..|.+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~L--kKS~M~~~~Qv~hV----~aERdiL~~~ds~~vVKLyYsFQD 212 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKIL--KKSEMLKKNQVEHV----RAERDILAEVDSPWVVKLYYSFQD 212 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecc--cHHHHHhhhhHHHH----HHHHHHhhhcCCCcEEEEEEEecC
Confidence 578999999999999999999986 5666777764 33221 12233333 789999999999999999999998
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
..++ ||||||+|||++..+|.+ ...|++..++.++.+++.|++.||+.|+|||||||+|+|
T Consensus 213 ~~~L--------------YLiMEylPGGD~mTLL~~-----~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlL 273 (550)
T KOG0605|consen 213 KEYL--------------YLIMEYLPGGDMMTLLMR-----KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLL 273 (550)
T ss_pred CCee--------------EEEEEecCCccHHHHHHh-----cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhhee
Confidence 7755 999999999999999987 457999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCccccccccccc---------------ccccCC----------------------CCCCC
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTC---------------CIAHRG----------------------IPAPD 1004 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~---------------~~~~~~----------------------~~~~~ 1004 (1142)
||.. |++||+|||++..+....... ...... .....
T Consensus 274 iD~~-------GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~ 346 (550)
T KOG0605|consen 274 IDAK-------GHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAY 346 (550)
T ss_pred ecCC-------CCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhh
Confidence 9998 999999999996432211000 000000 00111
Q ss_pred CccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccc
Q 001142 1005 VCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEH 1083 (1142)
Q Consensus 1005 ~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~ 1083 (1142)
..+|||.|||||++.+ ..|+..+|+||||||+||||.|.+||.+.++.+.+..|..... ...+
T Consensus 347 StVGTPDYiAPEVll~----kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP------------ 410 (550)
T KOG0605|consen 347 STVGTPDYIAPEVLLG----KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFP------------ 410 (550)
T ss_pred cccCCccccchHHHhc----CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCC------------
Confidence 3589999999999997 6799999999999999999999999999999999888754321 1111
Q ss_pred cccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC---CHHHHHHHHHhhcCCCC
Q 001142 1084 EVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP---TAGDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1084 ~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP---Sa~EVL~~L~~~~ss~~ 1138 (1142)
.+...+++..+||.+|+. ||++|. .++||-+||||+.-.+-
T Consensus 411 -------------~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~ 454 (550)
T KOG0605|consen 411 -------------EEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWD 454 (550)
T ss_pred -------------CcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcc
Confidence 011455789999999999 999996 69999999999976553
No 25
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5e-39 Score=372.62 Aligned_cols=261 Identities=21% Similarity=0.299 Sum_probs=220.0
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
.++..|++++-||.|+.|.|-+|++ +|+.+|||+....... ... ....+.+|+.||+-+.||||+++|+.++.
T Consensus 9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~-s~s----~~~~IerEIviMkLi~HpnVl~LydVwe~ 83 (786)
T KOG0588|consen 9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL-SSS----QPAGIEREIVIMKLIEHPNVLRLYDVWEN 83 (786)
T ss_pred ccccceeccccccCCCCceehhhhcccccceeEEEeecccccc-ccc----cccchhhhhHHHHHhcCCCeeeeeeeecc
Confidence 4567899999999999999999998 6888999986544211 111 12344799999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. ++|+|.||++||-|++++.. .+++++.++.++++||+.|+.|+|..+|+||||||+|+|
T Consensus 84 ~~--------------~lylvlEyv~gGELFdylv~-----kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlL 144 (786)
T KOG0588|consen 84 KQ--------------HLYLVLEYVPGGELFDYLVR-----KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLL 144 (786)
T ss_pred Cc--------------eEEEEEEecCCchhHHHHHh-----hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhh
Confidence 65 45999999999999999976 468999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
+|.. +.+||+|||+|..-... ....+.+|+|.|.|||++.+ ....+.++||||.|||||
T Consensus 145 Ld~~-------~nIKIADFGMAsLe~~g-----------klLeTSCGSPHYA~PEIV~G---~pYdG~~sDVWSCGVILf 203 (786)
T KOG0588|consen 145 LDVK-------NNIKIADFGMASLEVPG-----------KLLETSCGSPHYAAPEIVSG---RPYDGRPSDVWSCGVILF 203 (786)
T ss_pred hhcc-------cCEeeeccceeecccCC-----------ccccccCCCcccCCchhhcC---CCCCCCccccchhHHHHH
Confidence 9988 67999999999653221 12335679999999999998 234579999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
.||||+.||.+.+...++..++.|...- + ..++.++.+||.+||..||++|.
T Consensus 204 ALLtG~LPFdDdNir~LLlKV~~G~f~M-P---------------------------s~Is~eaQdLLr~ml~VDp~~Ri 255 (786)
T KOG0588|consen 204 ALLTGKLPFDDDNIRVLLLKVQRGVFEM-P---------------------------SNISSEAQDLLRRMLDVDPSTRI 255 (786)
T ss_pred HHHhCCCCCCCccHHHHHHHHHcCcccC-C---------------------------CcCCHHHHHHHHHHhccCccccc
Confidence 9999999999888888888888876421 1 15677899999999999999999
Q ss_pred CHHHHHHHHHhhcCCC
Q 001142 1122 TAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ss~ 1137 (1142)
|++||++|||...-.+
T Consensus 256 T~~eI~kHP~l~g~~~ 271 (786)
T KOG0588|consen 256 TTEEILKHPFLSGYTS 271 (786)
T ss_pred cHHHHhhCchhhcCCC
Confidence 9999999999986533
No 26
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-39 Score=360.49 Aligned_cols=278 Identities=25% Similarity=0.259 Sum_probs=215.5
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCC-----hHHHH-HhHHhHHHHHHHHhhCCCCCcc
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSS-----ADEIR-NFEYSCLGEVRMLGALRHSCIV 873 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~-----~~~~~-~~~~~~~~Ei~iL~~L~HpNIV 873 (1142)
+-..+..|++.+.||+|.||.|-+|+. .++.+|+|++.-+..... ..... .--.++.+||.||++++|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 356688999999999999999999998 567788888532211100 00000 0012458999999999999999
Q ss_pred ceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCC-CCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001142 874 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKH-VSVKLALFIAQDVAAALVELHSKHIMH 952 (1142)
Q Consensus 874 kl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~-ls~~~i~~Ia~qIa~gL~yLHs~gIvH 952 (1142)
+++++..+... ..+|||+|||..|.+..+- ...+ +++.++++|+++++.||+|||.+||||
T Consensus 172 ~LiEvLDDP~s------------~~~YlVley~s~G~v~w~p------~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiH 233 (576)
T KOG0585|consen 172 KLIEVLDDPES------------DKLYLVLEYCSKGEVKWCP------PDKPELSEQQARKYLRDVVLGLEYLHYQGIIH 233 (576)
T ss_pred EEEEeecCccc------------CceEEEEEeccCCccccCC------CCcccccHHHHHHHHHHHHHHHHHHHhcCeec
Confidence 99999876432 2569999999988865432 2344 999999999999999999999999999
Q ss_pred cCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhh
Q 001142 953 RDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVD 1032 (1142)
Q Consensus 953 rDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksD 1032 (1142)
|||||+|+|++.+ ++|||+|||.+........... .......+|||.|+|||.+.+.......+.+.|
T Consensus 234 RDIKPsNLLl~~~-------g~VKIsDFGVs~~~~~~~~~~~-----d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~D 301 (576)
T KOG0585|consen 234 RDIKPSNLLLSSD-------GTVKISDFGVSNEFPQGSDEGS-----DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALD 301 (576)
T ss_pred cccchhheEEcCC-------CcEEeeccceeeecccCCcccc-----HHHHhhcCCCccccchHhhcCCCCccccchhhh
Confidence 9999999999988 8999999999976533211100 001123579999999999987544455679999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1033 IWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1033 VwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
|||+||+||.|+.|+.||.+....++++.|....... ++. .+..+.+++||.+|
T Consensus 302 iWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~f-------------------------P~~-pe~~e~~kDli~~l 355 (576)
T KOG0585|consen 302 IWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEF-------------------------PEN-PEINEDLKDLIKRL 355 (576)
T ss_pred hhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccC-------------------------CCc-ccccHHHHHHHHHH
Confidence 9999999999999999999988888888886543211 110 14566799999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhcC
Q 001142 1113 TEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1113 L~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
|.+||++|.+..+|..|+|....
T Consensus 356 L~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 356 LEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred hhcChhheeehhhheecceeccC
Confidence 99999999999999999998755
No 27
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=365.26 Aligned_cols=255 Identities=29% Similarity=0.431 Sum_probs=214.1
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|+..+.||+|+||.||+|.+. ++.||+|+..++.. .++++++ .+|+.++.+++++||.++|+.+.....+
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~---~deIedi----qqei~~Ls~~~~~~it~yygsyl~g~~L 86 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEA---EDEIEDI----QQEISVLSQCDSPNITEYYGSYLKGTKL 86 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhc---chhhHHH----HHHHHHHHhcCcchHHhhhhheeecccH
Confidence 4677799999999999999984 56678887666542 3445555 7899999999999999999999876544
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
|++||||.||++.+.++. ...+.+..+..|+++++.||.|||.++.+|||||+.|||+..+
T Consensus 87 --------------wiiMey~~gGsv~~lL~~-----~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~ 147 (467)
T KOG0201|consen 87 --------------WIIMEYCGGGSVLDLLKS-----GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSES 147 (467)
T ss_pred --------------HHHHHHhcCcchhhhhcc-----CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEecc
Confidence 999999999999999975 3445888999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.|||+|||.+..+..... ...+++|||+|||||++.+ ..|+.|+||||||++.+||++
T Consensus 148 -------g~vkl~DfgVa~ql~~~~~----------rr~tfvGTPfwMAPEVI~~----~~Y~~KADIWSLGITaiEla~ 206 (467)
T KOG0201|consen 148 -------GDVKLADFGVAGQLTNTVK----------RRKTFVGTPFWMAPEVIKQ----SGYDTKADIWSLGITAIELAK 206 (467)
T ss_pred -------CcEEEEecceeeeeechhh----------ccccccccccccchhhhcc----ccccchhhhhhhhHHHHHHhc
Confidence 8899999999987655322 2357889999999999986 689999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|.+||....++.+...|-+..+|.+.. ..++.+++|+..||..||+.||+|.+
T Consensus 207 GePP~s~~hPmrvlflIpk~~PP~L~~---------------------------~~S~~~kEFV~~CL~k~P~~RpsA~~ 259 (467)
T KOG0201|consen 207 GEPPHSKLHPMRVLFLIPKSAPPRLDG---------------------------DFSPPFKEFVEACLDKNPEFRPSAKE 259 (467)
T ss_pred CCCCCcccCcceEEEeccCCCCCcccc---------------------------ccCHHHHHHHHHHhhcCcccCcCHHH
Confidence 999999877755544444444433322 55677999999999999999999999
Q ss_pred HHHHHHhhcCC
Q 001142 1126 LYEMFVARTSS 1136 (1142)
Q Consensus 1126 VL~~L~~~~ss 1136 (1142)
+++|.|.+..-
T Consensus 260 LLKh~FIk~a~ 270 (467)
T KOG0201|consen 260 LLKHKFIKRAK 270 (467)
T ss_pred HhhhHHHHhcC
Confidence 99999988743
No 28
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.1e-38 Score=355.93 Aligned_cols=253 Identities=27% Similarity=0.356 Sum_probs=205.3
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|.+. +..+|+|+....... ..... ..+.+|+.++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~----~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI-RLKQE----QHVHNEKRVLKEVSHPFIIRLFWTEHDQR- 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hhHHH----HHHHHHHHHHHhCCCCcHhhhHhhhccCC-
Confidence 46899999999999999999985 677888876433110 11112 23478999999999999999998877654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~ 136 (291)
T cd05612 75 -------------FLYMLMEYVPGGELFSYLRN-----SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDK 136 (291)
T ss_pred -------------eEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC
Confidence 45999999999999999976 346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++...... .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 137 ~-------~~~kl~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~~l~ 192 (291)
T cd05612 137 E-------GHIKLTDFGFAKKLRDR-------------TWTLCGTPEYLAPEVIQS----KGHNKAVDWWALGILIYEML 192 (291)
T ss_pred C-------CCEEEEecCcchhccCC-------------cccccCChhhcCHHHHcC----CCCCchhhHHHHHHHHHHHH
Confidence 7 78999999998754321 113458999999999875 55789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC--
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT-- 1122 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS-- 1122 (1142)
+|+.||.+....+....+..+... ++ ...+..+.+++.+||+.||.+||+
T Consensus 193 ~g~~pf~~~~~~~~~~~i~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~dp~~R~~~~ 244 (291)
T cd05612 193 VGYPPFFDDNPFGIYEKILAGKLE-FP---------------------------RHLDLYAKDLIKKLLVVDRTRRLGNM 244 (291)
T ss_pred hCCCCCCCCCHHHHHHHHHhCCcC-CC---------------------------ccCCHHHHHHHHHHcCCCHHHccCCc
Confidence 999999987777766666543211 10 023456899999999999999995
Q ss_pred ---HHHHHHHHHhhcC
Q 001142 1123 ---AGDLYEMFVARTS 1135 (1142)
Q Consensus 1123 ---a~EVL~~L~~~~s 1135 (1142)
++++++|+|+...
T Consensus 245 ~~~~~~~l~h~~~~~~ 260 (291)
T cd05612 245 KNGADDVKNHRWFKSV 260 (291)
T ss_pred cCCHHHHhcCccccCC
Confidence 9999999999753
No 29
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-38 Score=351.85 Aligned_cols=283 Identities=21% Similarity=0.254 Sum_probs=213.2
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|+-.+++|.|+||+||+|... +..+|+|-.- .. ...+ .+|+++|+.+.|||||++.-+|......
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~-~d-----~r~k------nrEl~im~~l~HpNIV~L~~~f~~~~~~ 92 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVL-QD-----KRYK------NRELQIMRKLDHPNIVRLLYFFSSSTES 92 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEec-CC-----CCcC------cHHHHHHHhcCCcCeeeEEEEEEecCCC
Confidence 4788999999999999999974 4566666432 21 1112 4799999999999999999988764311
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
...+..+||||+| .+|.++++... ..+..++...++-+.+||.+||.|||+.||+||||||+|+|+|.+
T Consensus 93 ---------d~~~lnlVleymP-~tL~~~~r~~~-~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~ 161 (364)
T KOG0658|consen 93 ---------DEVYLNLVLEYMP-ETLYRVIRHYT-RANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPD 161 (364)
T ss_pred ---------chhHHHHHHHhch-HHHHHHHHHHh-hcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCC
Confidence 1335679999998 89999998643 334678999999999999999999999999999999999999987
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
. +.+||||||.|+.+...... .....|.+|+|||.+.+ ...|+.++||||.||++.||+-
T Consensus 162 t------g~LKicDFGSAK~L~~~epn-----------iSYicSRyYRaPELifg---a~~Yt~~IDiWSaGCV~aELl~ 221 (364)
T KOG0658|consen 162 T------GVLKICDFGSAKVLVKGEPN-----------ISYICSRYYRAPELIFG---ATEYTTSIDIWSAGCVMAELLK 221 (364)
T ss_pred C------CeEEeccCCcceeeccCCCc-----------eeEEEeccccCHHHHcC---ccccCceeEEhhhhHHHHHHhc
Confidence 5 89999999999887653322 23457899999999998 4689999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhcc-cccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1046 LQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGS-CHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
|++-|.|.+..+....|.. -..|... .+..+.. +.+..+.+.....-..-.....+++..+|+.++|+++|.+|.++
T Consensus 222 g~plFpG~s~~dQL~eIik~lG~Pt~e-~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~ 300 (364)
T KOG0658|consen 222 GQPLFPGDSSVDQLVEIIKVLGTPTRE-DIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSA 300 (364)
T ss_pred CCcccCCCCHHHHHHHHHHHhCCCCHH-HHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCH
Confidence 9999999887776655533 3333322 2222211 11111111111110000112567789999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001142 1124 GDLYEMFVART 1134 (1142)
Q Consensus 1124 ~EVL~~L~~~~ 1134 (1142)
.|++.|++|..
T Consensus 301 ~~~l~h~fFde 311 (364)
T KOG0658|consen 301 LEALAHPFFDE 311 (364)
T ss_pred HHHhcchhhHH
Confidence 99999999864
No 30
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.2e-37 Score=350.47 Aligned_cols=282 Identities=20% Similarity=0.226 Sum_probs=206.4
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
..+++|++.++||+|+||+||+|+.. +..+|+|+.+...... ... .+.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~---~~~----~~~~E~~~l~~l~h~niv~~~~~~~~ 74 (288)
T cd07871 2 GKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG---APC----TAIREVSLLKNLKHANIVTLHDIIHT 74 (288)
T ss_pred CccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCC---cch----hHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 35678999999999999999999874 5678888764332111 111 23689999999999999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+ ..++||||++ ++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 75 ~~--------------~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil 135 (288)
T cd07871 75 ER--------------CLTLVFEYLD-SDLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLL 135 (288)
T ss_pred CC--------------eEEEEEeCCC-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 54 3499999997 5999988652 235789999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||+++....... ......+++.|+|||++.+ ...++.++||||+||++|
T Consensus 136 ~~~~-------~~~kl~DfG~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~~l~ 195 (288)
T cd07871 136 INEK-------GELKLADFGLARAKSVPTK----------TYSNEVVTLWYRPPDVLLG---STEYSTPIDMWGVGCILY 195 (288)
T ss_pred ECCC-------CCEEECcCcceeeccCCCc----------cccCceecccccChHHhcC---CcccCcHHHHHHHHHHHH
Confidence 9887 7899999999865432111 1123458999999999864 245789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccc---cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH---EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|++|+.||.+.+..+....+...........+....... .....+.. ...........+.++.+|+.+||+.||.
T Consensus 196 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dll~~mL~~dp~ 274 (288)
T cd07871 196 EMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYR-AQPLINHAPRLDTDGIDLLSSLLLYETK 274 (288)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccC-CCchHHhCCCCCHHHHHHHHHhcCcCcc
Confidence 9999999998877766655553332222222221111000 00000000 0000011113456789999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 001142 1119 ERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~ 1132 (1142)
+|||++|+++|+|+
T Consensus 275 ~R~t~~~~l~hp~f 288 (288)
T cd07871 275 SRISAEAALRHSYF 288 (288)
T ss_pred cCCCHHHHhcCCCC
Confidence 99999999999986
No 31
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-38 Score=367.26 Aligned_cols=267 Identities=24% Similarity=0.383 Sum_probs=215.0
Q ss_pred CCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
...++...+.+.||+|+||+||+|+|.| +||||+..++ ....+..+.| +.|+.++++-+|.||+-++|++..+
T Consensus 388 eIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~--~pt~~qlqaF----KnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 388 EIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVD--DPTPEQLQAF----KNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred ccCHHHhhccceeccccccceeeccccc-ceEEEEEecC--CCCHHHHHHH----HHHHHHHhhcchhhheeeehhhcCC
Confidence 3445567899999999999999999975 5799986544 5556667777 8999999999999999999999854
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ..||+.+|+|.||+.+++.. +..|.+...+.||+||++|+.|||.++|||||||..|||+
T Consensus 461 ~---------------~AIiTqwCeGsSLY~hlHv~----etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl 521 (678)
T KOG0193|consen 461 P---------------LAIITQWCEGSSLYTHLHVQ----ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL 521 (678)
T ss_pred c---------------eeeeehhccCchhhhhccch----hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE
Confidence 3 28999999999999999862 3579999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
.++ ++|||+|||++....... +.......-|...|||||++.. ....+|++.+||||||+++||
T Consensus 522 ~~~-------~kVkIgDFGLatvk~~w~--------g~~q~~qp~gsilwmAPEvIRm-qd~nPfS~qSDVYaFGiV~YE 585 (678)
T KOG0193|consen 522 HED-------LKVKIGDFGLATVKTRWS--------GEQQLEQPHGSLLWMAPEVIRM-QDDNPFSFQSDVYAFGIVWYE 585 (678)
T ss_pred ccC-------CcEEEecccceeeeeeec--------cccccCCCccchhhhcHHHHhh-cccCCCCcccchhhhhHHHHH
Confidence 887 789999999996543221 1112223357889999999974 446789999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++|..||......+++.++-+|.. +.... ....+++++++|+..||..++++||
T Consensus 586 Lltg~lPysi~~~dqIifmVGrG~l~pd~s~------------------------~~s~~pk~mk~Ll~~C~~~~~~eRP 641 (678)
T KOG0193|consen 586 LLTGELPYSIQNRDQIIFMVGRGYLMPDLSK------------------------IRSNCPKAMKRLLSDCWKFDREERP 641 (678)
T ss_pred HHhCcCCcCCCChhheEEEecccccCccchh------------------------hhccCHHHHHHHHHHHHhcCcccCc
Confidence 9999999996665555555444421 11110 1126788999999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
.+.+|+..+.....
T Consensus 642 ~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 642 LFPQLLSKLEELLP 655 (678)
T ss_pred cHHHHHHHHHHhhh
Confidence 99999996665443
No 32
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.2e-38 Score=360.12 Aligned_cols=258 Identities=23% Similarity=0.289 Sum_probs=208.8
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
....+.+|++.+.||+|+||.||+|++. +..+|+|+...... ...... ..+.+|+.++++++||||+++++++
T Consensus 13 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~----~~~~~E~~~l~~l~hp~iv~~~~~~ 87 (329)
T PTZ00263 13 SSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREI-LKMKQV----QHVAQEKSILMELSHPFIVNMMCSF 87 (329)
T ss_pred CCCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhhH----HHHHHHHHHHHhCCCCCCCcEEEEE
Confidence 3445788999999999999999999984 56788888643211 011112 2347899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.+ +.++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|
T Consensus 88 ~~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~N 148 (329)
T PTZ00263 88 QDEN--------------RVYFLLEFVVGGELFTHLRK-----AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPEN 148 (329)
T ss_pred EcCC--------------EEEEEEcCCCCChHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHH
Confidence 8655 34999999999999999976 3468999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||++....... ....||+.|+|||++.+ ..++.++|||||||+
T Consensus 149 Ill~~~-------~~~kl~Dfg~~~~~~~~~-------------~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 204 (329)
T PTZ00263 149 LLLDNK-------GHVKVTDFGFAKKVPDRT-------------FTLCGTPEYLAPEVIQS----KGHGKAVDWWTMGVL 204 (329)
T ss_pred EEECCC-------CCEEEeeccCceEcCCCc-------------ceecCChhhcCHHHHcC----CCCCCcceeechHHH
Confidence 999887 789999999997543211 13468999999999876 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|+|++|..||.+....+....+..+..+ ++. ..+..+.+|+.+||+.||.+
T Consensus 205 l~elltg~~pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~~~~~~~li~~~L~~dP~~ 256 (329)
T PTZ00263 205 LYEFIAGYPPFFDDTPFRIYEKILAGRLK-FPN---------------------------WFDGRARDLVKGLLQTDHTK 256 (329)
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHhcCCcC-CCC---------------------------CCCHHHHHHHHHHhhcCHHH
Confidence 99999999999887776666666543211 110 23456899999999999999
Q ss_pred CCC-----HHHHHHHHHhhcC
Q 001142 1120 RPT-----AGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPS-----a~EVL~~L~~~~s 1135 (1142)
||+ +++++.|+|+...
T Consensus 257 R~~~~~~~~~~ll~hp~f~~~ 277 (329)
T PTZ00263 257 RLGTLKGGVADVKNHPYFHGA 277 (329)
T ss_pred cCCCCCCCHHHHhcCCccCCC
Confidence 997 7999999999753
No 33
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=371.18 Aligned_cols=259 Identities=27% Similarity=0.341 Sum_probs=214.9
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeE
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK 879 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~ 879 (1142)
...+++|.+.++||+|+||+|++|... +..+|+|+.+.... ...++.+.. +.|.+|+..+. ||.++.++..|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~I-l~~d~Ve~~----~~EkrI~~la~~HPFL~~L~~~f 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDI-LQRDEVESL----MCEKRIFELANRHPFLVNLFSCF 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccce-eccccHHHH----HHHHHHHHHhccCCeEeeccccc
Confidence 556889999999999999999999984 55678887543322 223344443 78888888774 99999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.++ +|+||||+.||++..+++ ...|++..++.++..|+.||+|||++||||||||.+|
T Consensus 439 QT~~~--------------l~fvmey~~Ggdm~~~~~------~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdN 498 (694)
T KOG0694|consen 439 QTKEH--------------LFFVMEYVAGGDLMHHIH------TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDN 498 (694)
T ss_pred ccCCe--------------EEEEEEecCCCcEEEEEe------cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhh
Confidence 98764 499999999999544433 2579999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||+|.+ |++||+|||+++..-.. .....+++|||.|||||++.+ ..|+.++|+|||||+
T Consensus 499 iLLD~e-------Gh~kiADFGlcKe~m~~----------g~~TsTfCGTpey~aPEil~e----~~Yt~aVDWW~lGVL 557 (694)
T KOG0694|consen 499 LLLDTE-------GHVKIADFGLCKEGMGQ----------GDRTSTFCGTPEFLAPEVLTE----QSYTRAVDWWGLGVL 557 (694)
T ss_pred eEEccc-------CcEEecccccccccCCC----------CCccccccCChhhcChhhhcc----CcccchhhHHHHHHH
Confidence 999998 99999999999753211 113357789999999999987 789999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
||||+.|+.||.+.++.++++.|........ ...+.+...|++++|..+|++
T Consensus 558 lyeML~Gq~PF~gddEee~FdsI~~d~~~yP----------------------------~~ls~ea~~il~~ll~k~p~k 609 (694)
T KOG0694|consen 558 LYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----------------------------RFLSKEAIAIMRRLLRKNPEK 609 (694)
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHhcCCCCCC----------------------------CcccHHHHHHHHHHhccCccc
Confidence 9999999999999999999999876543211 145667899999999999999
Q ss_pred CCC-----HHHHHHHHHhhcC
Q 001142 1120 RPT-----AGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPS-----a~EVL~~L~~~~s 1135 (1142)
|.. +.+|.+|+||+.-
T Consensus 610 RLG~~e~d~~~i~~hpFFr~i 630 (694)
T KOG0694|consen 610 RLGSGERDAEDIKKHPFFRSI 630 (694)
T ss_pred ccCCCCCCchhhhhCCccccC
Confidence 974 6899999999864
No 34
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.4e-37 Score=346.52 Aligned_cols=281 Identities=24% Similarity=0.265 Sum_probs=201.4
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|++. +..+|+|+..... ......+ .+.+|+.++++++||||+++++++..++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 73 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSE--ENEEVKE----TTLRELKMLRTLKQENIVELKEAFRRRG- 73 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccc--ccccchh----hHHHHHHHHHhCCCccccchhhhEecCC-
Confidence 36899999999999999999985 5567777754322 1111222 3378999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||++++.+..+... ...+++..+..++.||+.||.|||+.||+||||||+||+++.
T Consensus 74 -------------~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~ 135 (287)
T cd07848 74 -------------KLYLVFEYVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH 135 (287)
T ss_pred -------------EEEEEEecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence 34999999997766544332 246899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++......... ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 136 ~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~DiwslGvil~el~ 195 (287)
T cd07848 136 N-------DVLKLCDFGFARNLSEGSNA---------NYTEYVATRWYRSPELLLG----APYGKAVDMWSVGCILGELS 195 (287)
T ss_pred C-------CcEEEeeccCcccccccccc---------cccccccccccCCcHHHcC----CCCCCchhHHhHHHHHHHHH
Confidence 7 78999999999765322111 1123468999999999875 45789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccc---ccccccCCCCC-CchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE---HEVAQSGSGFE-KPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
+|+.||.+.+..+....+.....+.............. ........... ........+..+.+|+.+||+.||++|
T Consensus 196 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R 275 (287)
T cd07848 196 DGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDR 275 (287)
T ss_pred hCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccC
Confidence 99999987665554434433222211111111000000 00000000000 000011356779999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001142 1121 PTAGDLYEMFVA 1132 (1142)
Q Consensus 1121 PSa~EVL~~L~~ 1132 (1142)
||++|+++|+|+
T Consensus 276 ~s~~~~l~hp~f 287 (287)
T cd07848 276 YLTEQCLNHPAF 287 (287)
T ss_pred CCHHHHhcCCCC
Confidence 999999999986
No 35
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-38 Score=334.71 Aligned_cols=267 Identities=23% Similarity=0.339 Sum_probs=220.6
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 882 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~ 882 (1142)
+..|.-.+.||.|..++|-++.+ .+...|+|+..+..+....+...++.....+|+.||+++ .||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 55688889999999999998876 567788887655443333333555656668999999999 599999999999987
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
.++ ++|+|.|+.|.|.+++.. ...++++..++|++|+..|++|||.++||||||||+|||+
T Consensus 96 sF~--------------FlVFdl~prGELFDyLts-----~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl 156 (411)
T KOG0599|consen 96 AFV--------------FLVFDLMPRGELFDYLTS-----KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL 156 (411)
T ss_pred chh--------------hhhhhhcccchHHHHhhh-----heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee
Confidence 765 999999999999999976 4679999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc--CCCCCCchhhHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH--KPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~~s~ksDVwSLGviL 1040 (1142)
+++ .++||+|||+|+.+....+ ....+|||+|.|||.+.... ....|+..+|+||.|||+
T Consensus 157 ddn-------~~i~isDFGFa~~l~~Gek-----------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVIm 218 (411)
T KOG0599|consen 157 DDN-------MNIKISDFGFACQLEPGEK-----------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIM 218 (411)
T ss_pred ccc-------cceEEeccceeeccCCchh-----------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHH
Confidence 988 7899999999987765332 23457999999999987633 345689999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|.|+.|++||......-+...|..|....-.. ++. +.+...++||.+||+.||.+|
T Consensus 219 yTLLaGcpPFwHRkQmlMLR~ImeGkyqF~sp-----------------------eWa-dis~~~KdLIsrlLqVdp~~R 274 (411)
T KOG0599|consen 219 YTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSP-----------------------EWA-DISATVKDLISRLLQVDPTKR 274 (411)
T ss_pred HHHHcCCCchhHHHHHHHHHHHHhcccccCCc-----------------------chh-hccccHHHHHHHHHeeCchhc
Confidence 99999999997655555667777776432221 111 567779999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 001142 1121 PTAGDLYEMFVAR 1133 (1142)
Q Consensus 1121 PSa~EVL~~L~~~ 1133 (1142)
.|++|+|+|+|+.
T Consensus 275 itake~LaHpff~ 287 (411)
T KOG0599|consen 275 ITAKEALAHPFFI 287 (411)
T ss_pred ccHHHHhcChHHH
Confidence 9999999999994
No 36
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-38 Score=344.42 Aligned_cols=290 Identities=19% Similarity=0.271 Sum_probs=216.6
Q ss_pred cceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
|...+.||+|+||.|+.|.+..+...|+++++..........+ +..+|+.+|+.++|+||+.+++.+..+.
T Consensus 24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~ak----RtlRElklLr~~~HeNIi~l~di~~p~~----- 94 (359)
T KOG0660|consen 24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAK----RTLRELKLLRHLRHENIIGLLDIFRPPS----- 94 (359)
T ss_pred ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHH----HHHHHHHHHHHhcCCCcceEEeeccccc-----
Confidence 4557999999999999999865555555555543333333333 3479999999999999999999987521
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
.......|+|+|+|+ .+|...++. ...++...+..+++||++||.|+|+.+|+||||||.|+|++.+
T Consensus 95 ----~~~f~DvYiV~elMe-tDL~~iik~-----~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~--- 161 (359)
T KOG0660|consen 95 ----RDKFNDVYLVFELME-TDLHQIIKS-----QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNAD--- 161 (359)
T ss_pred ----ccccceeEEehhHHh-hHHHHHHHc-----CccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccC---
Confidence 123346799999995 899999986 3459999999999999999999999999999999999999988
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1048 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~ 1048 (1142)
..+||+|||+|+........ .--...+.|.+|+|||++.. ...|+.++||||.|||+.||++|++
T Consensus 162 ----c~lKI~DFGLAR~~~~~~~~--------~~mTeYVaTRWYRAPElll~---~~~Yt~aiDiWSvGCI~AEmL~gkp 226 (359)
T KOG0660|consen 162 ----CDLKICDFGLARYLDKFFED--------GFMTEYVATRWYRAPELLLN---SSEYTKAIDIWSVGCILAEMLTGKP 226 (359)
T ss_pred ----CCEEeccccceeeccccCcc--------cchhcceeeeeecCHHHHhc---cccccchhhhhhhhHHHHHHHcCCC
Confidence 78999999999876542111 01124568999999999876 4689999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCC---CchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1049 PYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE---KPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1049 Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
.|.|.+..+....|......+-...+..+.........+...... ....-....+...+|+.+||..||.+|+|++|
T Consensus 227 lFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~e 306 (359)
T KOG0660|consen 227 LFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEE 306 (359)
T ss_pred CCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHH
Confidence 999988877777774443333333333332111111111111111 11111256778999999999999999999999
Q ss_pred HHHHHHhhcC
Q 001142 1126 LYEMFVARTS 1135 (1142)
Q Consensus 1126 VL~~L~~~~s 1135 (1142)
+|+||++..-
T Consensus 307 AL~hPYl~~~ 316 (359)
T KOG0660|consen 307 ALAHPYLAPY 316 (359)
T ss_pred HhcChhhhhh
Confidence 9999998754
No 37
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.3e-37 Score=356.48 Aligned_cols=249 Identities=25% Similarity=0.348 Sum_probs=199.3
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 890 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~ 890 (1142)
+.||+|+||.||+|++ .+..+|+|+.+..... ...... .+.+|+.++++++||||+++++++...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~----~~~~e~~~l~~l~hp~i~~~~~~~~~~~------- 68 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVII-AKDEVA----HTLTESRVLQNTRHPFLTALKYSFQTHD------- 68 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHH----HHHHHHHHHHhCCCCCCCCEEEEEEcCC-------
Confidence 4799999999999987 4667888886532211 111222 3378999999999999999999988655
Q ss_pred CCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCC
Q 001142 891 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 970 (1142)
Q Consensus 891 ~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~ 970 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 69 -------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~----- 131 (323)
T cd05571 69 -------RLCFVMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKD----- 131 (323)
T ss_pred -------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC-----
Confidence 34999999999999999875 3468999999999999999999999999999999999999887
Q ss_pred CCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001142 971 GKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPY 1050 (1142)
Q Consensus 971 ~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf 1050 (1142)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 132 --~~~kl~DfG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~elltg~~Pf 195 (323)
T cd05571 132 --GHIKITDFGLCKEGISDG----------ATMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPF 195 (323)
T ss_pred --CCEEEeeCCCCcccccCC----------CcccceecCccccChhhhcC----CCCCccccCcccchhhhhhhcCCCCC
Confidence 789999999986432111 11123469999999999875 56889999999999999999999999
Q ss_pred CCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHHH
Q 001142 1051 MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAGD 1125 (1142)
Q Consensus 1051 ~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-----Sa~E 1125 (1142)
.+.+.......+..... .++ ...++.+.+++.+||+.||++|| ++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~-~~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ 247 (323)
T cd05571 196 YNQDHEKLFELILMEEI-RFP---------------------------RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKE 247 (323)
T ss_pred CCCCHHHHHHHHHcCCC-CCC---------------------------CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHH
Confidence 87766665555433221 110 13456789999999999999999 8999
Q ss_pred HHHHHHhhc
Q 001142 1126 LYEMFVART 1134 (1142)
Q Consensus 1126 VL~~L~~~~ 1134 (1142)
+++|+|+..
T Consensus 248 ll~h~~f~~ 256 (323)
T cd05571 248 IMEHRFFAS 256 (323)
T ss_pred HHcCCCcCC
Confidence 999999865
No 38
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=7.3e-37 Score=350.67 Aligned_cols=292 Identities=20% Similarity=0.230 Sum_probs=204.8
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.++||+|+||.||+|.+. +..+|+|..... ......... +.+|+.++++++||||+++++++......
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDV--FEHVSDATR----ILREIKLLRLLRHPDIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechh--hccchhHHH----HHHHHHHHHhCCCCCEeeecceEeccCCC
Confidence 4899999999999999999874 567788764322 111122223 37899999999999999999988653211
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.....|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 75 ---------~~~~~~lv~e~~~-~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~ 139 (338)
T cd07859 75 ---------EFKDIYVVFELME-SDLHQVIKA-----NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANAD 139 (338)
T ss_pred ---------CCceEEEEEecCC-CCHHHHHHh-----cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence 1235699999995 799998875 2468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||+++........ ........||+.|+|||++.+. ...++.++|||||||++|+|++
T Consensus 140 -------~~~kL~Dfg~~~~~~~~~~~-------~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~~DvwSlGvvl~el~t 203 (338)
T cd07859 140 -------CKLKICDFGLARVAFNDTPT-------AIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAEVLT 203 (338)
T ss_pred -------CcEEEccCccccccccccCc-------cccccCCCCCCCcCCHHHHhcc--ccccCchhHHHHHHHHHHHHHc
Confidence 78999999999754321111 0011234689999999998642 1467899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccc---cccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEV---AQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|+.||.+.+.......+....................... ................++.+.+++.+||+.||++|||
T Consensus 204 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 283 (338)
T cd07859 204 GKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT 283 (338)
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC
Confidence 9999987665544433322111111111111100000000 0000000000001134567899999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001142 1123 AGDLYEMFVARTSS 1136 (1142)
Q Consensus 1123 a~EVL~~L~~~~ss 1136 (1142)
++|+++|+|+....
T Consensus 284 ~~e~l~hp~f~~~~ 297 (338)
T cd07859 284 AEEALADPYFKGLA 297 (338)
T ss_pred HHHHhcCchhhhcC
Confidence 99999999997543
No 39
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-37 Score=358.82 Aligned_cols=258 Identities=20% Similarity=0.280 Sum_probs=207.6
Q ss_pred CCCCCCcceeeeecccCceEEEEEEECC---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFGS---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~---~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
...+++|++.+.||+|+||.||+|.+.. ..+|+|+...... ......+. +.+|+.+++.++||||+++++++
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~-~~~~~~~~----~~~E~~~l~~l~hp~Iv~~~~~~ 100 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI-IKQKQVDH----VFSERKILNYINHPFCVNLYGSF 100 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh-hhhhhHHH----HHHHHHHHHhCCCCCCcceEEEE
Confidence 4567789999999999999999998643 4578887543211 11122223 37899999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.. ..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 101 ~~~~--------------~~~lv~Ey~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~N 161 (340)
T PTZ00426 101 KDES--------------YLYLVLEFVIGGEFFTFLRR-----NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPEN 161 (340)
T ss_pred EeCC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHH
Confidence 8655 35999999999999999976 3468999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||++...... .....||+.|+|||++.+ ..++.++|||||||+
T Consensus 162 ILl~~~-------~~ikL~DFG~a~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvi 217 (340)
T PTZ00426 162 LLLDKD-------GFIKMTDFGFAKVVDTR-------------TYTLCGTPEYIAPEILLN----VGHGKAADWWTLGIF 217 (340)
T ss_pred EEECCC-------CCEEEecCCCCeecCCC-------------cceecCChhhcCHHHHhC----CCCCccccccchhhH
Confidence 999877 78999999999754321 113468999999999875 557899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|||++|..||.+.+.......+..+... .+ ...++.+.+++.+||+.||++
T Consensus 218 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~l~~dp~~ 269 (340)
T PTZ00426 218 IYEILVGCPPFYANEPLLIYQKILEGIIY-FP---------------------------KFLDNNCKHLMKKLLSHDLTK 269 (340)
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHhcCCCC-CC---------------------------CCCCHHHHHHHHHHcccCHHH
Confidence 99999999999987766666665443211 00 033456889999999999999
Q ss_pred CC-----CHHHHHHHHHhhcCC
Q 001142 1120 RP-----TAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1120 RP-----Sa~EVL~~L~~~~ss 1136 (1142)
|+ +++++++|+|+....
T Consensus 270 R~~~~~~~~~~~~~hp~f~~~~ 291 (340)
T PTZ00426 270 RYGNLKKGAQNVKEHPWFGNID 291 (340)
T ss_pred cCCCCCCCHHHHHcCCCcCCCC
Confidence 95 999999999997643
No 40
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.1e-37 Score=341.02 Aligned_cols=299 Identities=21% Similarity=0.245 Sum_probs=222.8
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCC-ccceeeeEecC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC-IVEMYGHKISS 882 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpN-IVkl~g~~~~~ 882 (1142)
...|...++||+|+||+||+|+. .+..||+|..+++... +.......+|+.+++.++|+| ||.+++++.+.
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~------EG~P~taiREisllk~L~~~~~iv~L~dv~~~~ 83 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE------EGVPSTAIREISLLKRLSHANHIVRLHDVIHTS 83 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc------cCCCchhhHHHHHHHHhCCCcceEEEEeeeeec
Confidence 55688889999999999999997 5667888887766432 112233479999999999999 99999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+.. .....+++||||++ .+|..++....... ..++...++.+++||+.||+|||+++|+||||||+||||
T Consensus 84 ~~~--------~~~~~l~lvfe~~d-~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi 153 (323)
T KOG0594|consen 84 NNH--------RGIGKLYLVFEFLD-RDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI 153 (323)
T ss_pred ccc--------cccceEEEEEEeec-ccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE
Confidence 521 22335799999997 89999998743221 357779999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+|+........ ....++|..|+|||++.+ ...|+...||||+|||++|
T Consensus 154 ~~~-------G~lKlaDFGlAra~~ip~~~----------yt~evvTlWYRaPEvLlG---s~~Ys~~vDiWs~GcIfaE 213 (323)
T KOG0594|consen 154 SSS-------GVLKLADFGLARAFSIPMRT----------YTPEVVTLWYRAPEVLLG---STSYSTSVDIWSLGCIFAE 213 (323)
T ss_pred CCC-------CcEeeeccchHHHhcCCccc----------ccccEEEeeccCHHHhcC---CCcCCCCcchHhHHHHHHH
Confidence 987 89999999999865543222 234578999999999998 3469999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccc--cccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEH--EVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+++++.|.+.++.+....|......+-...++........ .+.+...............+...+++.+||+.+|.+|
T Consensus 214 m~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R 293 (323)
T KOG0594|consen 214 MFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKR 293 (323)
T ss_pred HHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccC
Confidence 99999999998887777666433222222222222111111 1111110111111111223578999999999999999
Q ss_pred CCHHHHHHHHHhhcCCCCCC
Q 001142 1121 PTAGDLYEMFVARTSSSISS 1140 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ss~~s~ 1140 (1142)
.||+.++.|++|......++
T Consensus 294 ~Sa~~al~h~yf~~~~~~~~ 313 (323)
T KOG0594|consen 294 ISAKGALTHPYFSELPEKSS 313 (323)
T ss_pred cCHHHHhcChhhcccccchh
Confidence 99999999999987655443
No 41
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.3e-37 Score=346.33 Aligned_cols=261 Identities=22% Similarity=0.298 Sum_probs=200.0
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|++.+.||+|+||.||+|.+ .+..+|+|+...+.... ... ...+.+|+.++++++|+||+++++++.+.+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~----~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-- 73 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-RKG----EAMALNEKRILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh-hhh----HHHHHHHHHHHHhcCCCcEEEEEEEEccCC--
Confidence 378899999999999999987 46778888754322111 111 123378999999999999999999987655
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++|+|.+++... ....+++..+..++.|++.||+|||++||+||||||+|||++.+
T Consensus 74 ------------~~~lv~e~~~~g~L~~~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~ 138 (285)
T cd05631 74 ------------ALCLVLTIMNGGDLKFHIYNM---GNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDR 138 (285)
T ss_pred ------------eEEEEEEecCCCcHHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC
Confidence 349999999999999888652 23468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 139 -------~~~kl~Dfg~~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~----~~~~~~~DvwslGvil~el~~ 196 (285)
T cd05631 139 -------GHIRISDLGLAVQIPEGE-----------TVRGRVGTVGYMAPEVINN----EKYTFSPDWWGLGCLIYEMIQ 196 (285)
T ss_pred -------CCEEEeeCCCcEEcCCCC-----------eecCCCCCCCccCHhhhcC----CCCCcccCchhHHHHHHHHHh
Confidence 789999999987543211 1113468999999999975 568899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC---
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT--- 1122 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS--- 1122 (1142)
|+.||.+.........+....... ... .....+..+.+|+.+||+.||.+||+
T Consensus 197 g~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~-----~~~~~s~~~~~li~~~l~~~P~~R~~~~~ 252 (285)
T cd05631 197 GQSPFRKRKERVKREEVDRRVKED-------------------QEE-----YSEKFSEDAKSICRMLLTKNPKERLGCRG 252 (285)
T ss_pred CCCCCCCCCcchhHHHHHHHhhcc-------------------ccc-----CCccCCHHHHHHHHHHhhcCHHHhcCCCC
Confidence 999998654322222221100000 000 00134567899999999999999997
Q ss_pred --HHHHHHHHHhhcCC
Q 001142 1123 --AGDLYEMFVARTSS 1136 (1142)
Q Consensus 1123 --a~EVL~~L~~~~ss 1136 (1142)
++++++|+|+....
T Consensus 253 ~~~~~~~~h~~~~~~~ 268 (285)
T cd05631 253 NGAAGVKQHPIFKNIN 268 (285)
T ss_pred CCHHHHhcCHhhcCCC
Confidence 99999999997653
No 42
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-37 Score=325.35 Aligned_cols=263 Identities=22% Similarity=0.256 Sum_probs=219.0
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
...++++|++++.||+|-||.||+|+.+.....|+++.+.+. .-...+.+.++.+|++|-..|+||||+++|++|.+
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs---qi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd 93 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---QILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD 93 (281)
T ss_pred cccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHH---HHHHhcchhhhhheeEeecccCCccHHhhhhheec
Confidence 345688999999999999999999998655544443333321 23334556677999999999999999999999998
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
+... ||++||.++|+|...++. ....++++.....++.|+|.||.|+|..+||||||||+|+|
T Consensus 94 ~~ri--------------yLilEya~~gel~k~L~~---~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlL 156 (281)
T KOG0580|consen 94 SKRI--------------YLILEYAPRGELYKDLQE---GRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLL 156 (281)
T ss_pred ccee--------------EEEEEecCCchHHHHHHh---cccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhc
Confidence 7644 999999999999999985 34567999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.. +.+|++|||-+..... ....+.+||..|.+||+..+ ..++..+|+|++|++.|
T Consensus 157 lg~~-------~~lkiAdfGwsV~~p~------------~kR~tlcgt~dyl~pEmv~~----~~hd~~Vd~w~lgvl~y 213 (281)
T KOG0580|consen 157 LGSA-------GELKIADFGWSVHAPS------------NKRKTLCGTLDYLPPEMVEG----RGHDKFVDLWSLGVLCY 213 (281)
T ss_pred cCCC-------CCeeccCCCceeecCC------------CCceeeecccccCCHhhcCC----CCccchhhHHHHHHHHH
Confidence 9988 7899999999865331 13346789999999999876 67889999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++.|.+||......+.+..|........ ...+...+++|.+|+..+|.+|.
T Consensus 214 eflvg~ppFes~~~~etYkrI~k~~~~~p----------------------------~~is~~a~dlI~~ll~~~p~~r~ 265 (281)
T KOG0580|consen 214 EFLVGLPPFESQSHSETYKRIRKVDLKFP----------------------------STISGGAADLISRLLVKNPIERL 265 (281)
T ss_pred HHHhcCCchhhhhhHHHHHHHHHccccCC----------------------------cccChhHHHHHHHHhccCccccc
Confidence 99999999998887788888765432110 15566799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
+..|+++|+|....
T Consensus 266 ~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 266 ALTEVMDHPWIVAN 279 (281)
T ss_pred cHHHHhhhHHHHhc
Confidence 99999999998643
No 43
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1e-36 Score=363.94 Aligned_cols=289 Identities=19% Similarity=0.241 Sum_probs=204.4
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.-.+|++.++||+|+||.||+|.+ .+..+|+|..... . .. ..+|+.++++++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~----~~----~~~Ei~il~~l~h~niv~l~~~~~~~ 131 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----P----QY----KNRELLIMKNLNHINIIFLKDYYYTE 131 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----c----ch----HHHHHHHHHhcCCCCCcceeeeEeec
Confidence 345799999999999999999997 4567788764211 0 01 14799999999999999999987653
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
... .......+++||||++ ++|.+++..... ....+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 132 ~~~------~~~~~~~l~lvmE~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl 203 (440)
T PTZ00036 132 CFK------KNEKNIFLNVVMEFIP-QTVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI 203 (440)
T ss_pred ccc------cCCCceEEEEEEecCC-ccHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEE
Confidence 211 1112335689999997 688888765322 23578999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.++ +.+||+|||+|+.+.... ......||+.|+|||++.+ ...|+.++|||||||++||
T Consensus 204 ~~~~------~~vkL~DFGla~~~~~~~-----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlGvil~e 263 (440)
T PTZ00036 204 DPNT------HTLKLCDFGSAKNLLAGQ-----------RSVSYICSRFYRAPELMLG---ATNYTTHIDLWSLGCIIAE 263 (440)
T ss_pred cCCC------CceeeeccccchhccCCC-----------CcccCCCCcCccCHHHhcC---CCCCCcHHHHHHHHHHHHH
Confidence 8652 479999999997653211 1113468999999999865 2468899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHH-hCCCCCchhHHhhhcc-cccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQ-MGKRPRLTDELEALGS-CHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~-~~~~p~l~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|++|.+||.+....+....+. ....+... .+..... .....+............+...++++.+||.+||+.||.+|
T Consensus 264 lltG~~pf~~~~~~~~~~~i~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R 342 (440)
T PTZ00036 264 MILGYPIFSGQSSVDQLVRIIQVLGTPTED-QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKR 342 (440)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHH-HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHC
Confidence 999999998876655444442 22222211 1111100 00000000000000000011345679999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001142 1121 PTAGDLYEMFVART 1134 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ 1134 (1142)
||+.|+++|+|+..
T Consensus 343 ~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 343 LNPIEALADPFFDD 356 (440)
T ss_pred cCHHHHhCChhHHh
Confidence 99999999999864
No 44
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=9.6e-37 Score=342.13 Aligned_cols=284 Identities=21% Similarity=0.232 Sum_probs=202.3
Q ss_pred CCcceeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEe
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKI 880 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~---~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkl~g~~~ 880 (1142)
.+|++.+.||+|+||.||+|++. +..+|+|+......... ....+ .+|+.+++.+ .||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~----~~e~~~l~~l~~~~hpniv~~~~~~~ 74 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--MPLST----IREVAVLRHLETFEHPNVVRLFDVCT 74 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC--chHHH----HHHHHHHHhhcccCCCCcceEEEEEe
Confidence 36899999999999999999872 45688887654332111 11122 4677776665 6999999999886
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
..... .....++||||++ ++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+||
T Consensus 75 ~~~~~---------~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Ni 141 (290)
T cd07862 75 VSRTD---------RETKLTLVFEHVD-QDLTTYLDK---VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 141 (290)
T ss_pred cccCC---------CCCcEEEEEccCC-CCHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHE
Confidence 43210 1234699999997 799999875 2234589999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 142 l~~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~DiwslG~il 199 (290)
T cd07862 142 LVTSS-------GQIKLADFGLARIYSFQM-----------ALTSVVVTLWYRAPEVLLQ----SSYATPVDLWSVGCIF 199 (290)
T ss_pred EEcCC-------CCEEEccccceEeccCCc-----------ccccccccccccChHHHhC----CCCCCccchHHHHHHH
Confidence 99887 789999999987543211 1123468999999999865 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|||++|++||.+....+....+........+..+..........+ ...............++.+.+++.+||+.||++|
T Consensus 200 ~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 278 (290)
T cd07862 200 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAF-HSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 278 (290)
T ss_pred HHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhc-cCCCCCCHHHHccCCCHHHHHHHHHHhccCchhc
Confidence 999999999998777666555533222211111111000000000 0000000011112456678999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001142 1121 PTAGDLYEMFVA 1132 (1142)
Q Consensus 1121 PSa~EVL~~L~~ 1132 (1142)
||+.|+++|+|+
T Consensus 279 ~s~~~~l~hp~f 290 (290)
T cd07862 279 ISAYSALSHPYF 290 (290)
T ss_pred CCHHHHhcCCCC
Confidence 999999999986
No 45
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.3e-36 Score=347.30 Aligned_cols=281 Identities=23% Similarity=0.296 Sum_probs=204.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||.||+|++. +..+|+|+..... ..... ..+.+|++++++++||||+++++++...+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 76 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAIR----NQIIRELQVLHECNSPYIVGFYGAFYSDG 76 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHH----HHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence 457999999999999999999985 5567777754321 12222 33489999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENILI 962 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDLKp~NILl 962 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||+
T Consensus 77 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~ 137 (331)
T cd06649 77 --------------EISICMEHMDGGSLDQVLKE-----AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV 137 (331)
T ss_pred --------------EEEEEeecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE
Confidence 35999999999999999976 24689999999999999999999986 69999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||++....... .....||+.|+|||++.+ ..++.++|||||||++||
T Consensus 138 ~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslG~il~e 194 (331)
T cd06649 138 NSR-------GEIKLCDFGVSGQLIDSM------------ANSFVGTRSYMSPERLQG----THYSVQSDIWSMGLSLVE 194 (331)
T ss_pred cCC-------CcEEEccCcccccccccc------------cccCCCCcCcCCHhHhcC----CCCCchHhHHHHHHHHHH
Confidence 887 789999999986543211 123468999999999875 568899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCc---hhHHhhhccccccccc----------------c-cCCCCCCchhhhhhH
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRL---TDELEALGSCHEHEVA----------------Q-SGSGFEKPEAELETL 1102 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l---~~~l~~~~~~~~~~~~----------------~-~~~~~~~~~~~~~~~ 1102 (1142)
|++|+.||......++...+........ ................ . ..............+
T Consensus 195 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (331)
T cd06649 195 LAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFT 274 (331)
T ss_pred HHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCcccc
Confidence 9999999987665554333221100000 0000000000000000 0 000000000011356
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1103 SFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1103 ~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+++.+|+.+||+.||++|||+.|+++|+|++..
T Consensus 275 ~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 275 PDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 789999999999999999999999999998754
No 46
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.3e-36 Score=344.24 Aligned_cols=285 Identities=19% Similarity=0.260 Sum_probs=201.6
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
..++|++.+.||+|+||.||+|++ .+..+|+|+...... ... .. .+.+|+.+++.++||||+++++++.+.
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~-~~----~~~~E~~~l~~l~h~niv~~~~~~~~~ 75 (303)
T cd07869 3 KADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--EGT-PF----TAIREASLLKGLKHANIVLLHDIIHTK 75 (303)
T ss_pred ccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--ccc-ch----hHHHHHHHHhhCCCCCcCeEEEEEecC
Confidence 456899999999999999999998 466788887643321 111 11 236899999999999999999998865
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ..++||||++ ++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 76 ~--------------~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill 136 (303)
T cd07869 76 E--------------TLTLVFEYVH-TDLCQYMDK----HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLI 136 (303)
T ss_pred C--------------eEEEEEECCC-cCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 4 3499999996 788888765 12458899999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++|+
T Consensus 137 ~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il~~ 196 (303)
T cd07869 137 SDT-------GELKLADFGLARAKSVPSH----------TYSNEVVTLWYRPPDVLLG---STEYSTCLDMWGVGCIFVE 196 (303)
T ss_pred CCC-------CCEEECCCCcceeccCCCc----------cCCCCcccCCCCChHHHcC---CCCCCcHHHHHHHHHHHHH
Confidence 877 7899999999865332111 1123458999999999865 2457889999999999999
Q ss_pred HHhCCCCCCCCCHH-HHHHHHHh-CCCCCchhHHhhh---cccccccccccC-CCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1043 LLTLQVPYMGLSEL-EIHDLIQM-GKRPRLTDELEAL---GSCHEHEVAQSG-SGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~-el~~~I~~-~~~p~l~~~l~~~---~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
|++|+.||.+.... +....+.. ...+.. ..+... ............ ............++.+.+++.+||+.|
T Consensus 197 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d 275 (303)
T cd07869 197 MIQGVAAFPGMKDIQDQLERIFLVLGTPNE-DTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCF 275 (303)
T ss_pred HHhCCCCCCCCccHHHHHHHHHHHhCCCCh-hhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccC
Confidence 99999999864332 22222211 111110 000000 000000000000 000000000123467889999999999
Q ss_pred CCCCCCHHHHHHHHHhhcCC
Q 001142 1117 PTERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~~ss 1136 (1142)
|++|||+.|+++|+|++.-.
T Consensus 276 p~~R~s~~~~l~h~~f~~~~ 295 (303)
T cd07869 276 PKNRLSAQAALSHEYFSDLP 295 (303)
T ss_pred chhccCHHHHhcCcccccCC
Confidence 99999999999999998643
No 47
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=5.7e-37 Score=352.31 Aligned_cols=260 Identities=23% Similarity=0.319 Sum_probs=207.1
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|++. +..+|+|+....... ..... ..+.+|+.++..++||||+++++++.+.+
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~----~~~~~e~~~l~~~~h~~iv~~~~~~~~~~- 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF-KLNEV----RHVLTERDILTTTKSEWLVKLLYAFQDDE- 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHH----HHHHHHHHHHHhCCCCCCccEEEEEEcCC-
Confidence 36899999999999999999984 567888886533211 11122 23478999999999999999999988654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..|+||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~ 136 (333)
T cd05600 75 -------------YLYLAMEYVPGGDFRTLLNN-----LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDA 136 (333)
T ss_pred -------------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC
Confidence 35999999999999999975 346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++..... ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 137 ~-------~~~kL~Dfg~a~~~~~-------------~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~ell 192 (333)
T cd05600 137 S-------GHIKLTDFGLSKGIVT-------------YANSVVGSPDYMAPEVLRG----KGYDFTVDYWSLGCMLYEFL 192 (333)
T ss_pred C-------CCEEEEeCcCCccccc-------------ccCCcccCccccChhHhcC----CCCCCccceecchHHHhhhh
Confidence 7 7899999999975432 1123468999999999876 47889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCC-CchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRP-RLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+|..||.+.+..+....+...... ..+. ........++.+.+++.+||..+|.+||++
T Consensus 193 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------------------~~~~~~~~s~~~~~li~~~l~~~~~rr~s~ 251 (333)
T cd05600 193 CGFPPFSGSTPNETWENLKYWKETLQRPV---------------------YDDPRFNLSDEAWDLITKLINDPSRRFGSL 251 (333)
T ss_pred hCCCCCCCCCHHHHHHHHHhccccccCCC---------------------CCccccccCHHHHHHHHHHhhChhhhcCCH
Confidence 999999987776666555332110 0000 000001446679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.++++|+|+...
T Consensus 252 ~~ll~h~~~~~~ 263 (333)
T cd05600 252 EDIKNHPFFKEV 263 (333)
T ss_pred HHHHhCcccCCC
Confidence 999999998753
No 48
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.3e-36 Score=349.51 Aligned_cols=262 Identities=23% Similarity=0.357 Sum_probs=197.4
Q ss_pred CCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g 877 (1142)
-++|++.++||+|+||.||+|.+. +..||+|+.+.. ......+.+ .+|+.++.++ +|||||++++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~----~~E~~~l~~l~~h~niv~~~~ 78 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG---ATASEHKAL----MSELKILIHIGNHLNVVNLLG 78 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc---cchHHHHHH----HHHHHHHHHhccCcceeeEEe
Confidence 357999999999999999999752 246788875321 122223333 7999999999 8999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc------------------------------------
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------------------------ 921 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~------------------------------------ 921 (1142)
++...+. ..++||||+++|+|.+++......
T Consensus 79 ~~~~~~~-------------~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (338)
T cd05102 79 ACTKPNG-------------PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVL 145 (338)
T ss_pred EecCCCC-------------ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcc
Confidence 8765321 358999999999999999752110
Q ss_pred ---------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeec
Q 001142 922 ---------------------GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDF 980 (1142)
Q Consensus 922 ---------------------~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DF 980 (1142)
...++++..+..++.||+.||+|||++||+||||||+|||++.+ +.+||+||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~-------~~~kl~Df 218 (338)
T cd05102 146 FSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN-------NVVKICDF 218 (338)
T ss_pred ccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC-------CcEEEeec
Confidence 01357888999999999999999999999999999999999877 78999999
Q ss_pred CCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-H
Q 001142 981 DRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-I 1058 (1142)
Q Consensus 981 GlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~e-l 1058 (1142)
|+++........ .......+++.|+|||++.+ ..++.++|||||||++|||++ |..||.+....+ .
T Consensus 219 G~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~ 286 (338)
T cd05102 219 GLARDIYKDPDY--------VRKGSARLPLKWMAPESIFD----KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEF 286 (338)
T ss_pred ccccccccCcch--------hcccCCCCCccccCcHHhhc----CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHH
Confidence 999754321110 01123346788999999875 568899999999999999997 999998654322 2
Q ss_pred HHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1059 HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1059 ~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
...+..+..+..+ ...++.+.+++.+||+.||.+|||+.|+++.+...
T Consensus 287 ~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 287 CQRLKDGTRMRAP---------------------------ENATPEIYRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HHHHhcCCCCCCC---------------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3333322221111 13456789999999999999999999999987643
No 49
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.3e-36 Score=353.92 Aligned_cols=269 Identities=20% Similarity=0.216 Sum_probs=202.3
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||+||+|.+. +..+|+|+...... ........+.+|+.++.+++||||+++++.+.+..
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~- 74 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM-----LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL- 74 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH-----HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-
Confidence 47899999999999999999874 56788888642211 01111233478999999999999999999988655
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..|+||||+++|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~ 136 (363)
T cd05628 75 -------------NLYLIMEFLPGGDMMTLLMK-----KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS 136 (363)
T ss_pred -------------eEEEEEcCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC
Confidence 34999999999999999975 346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCccccccccccccccc-------------------------CCCCCCCCccCCCcccchhhhc
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH-------------------------RGIPAPDVCVGTPRWMAPEVLR 1019 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~-------------------------~~~~~~~~~~GT~~Y~APE~l~ 1019 (1142)
+ +.+||+|||+++.+........... .........+||+.|+|||++.
T Consensus 137 ~-------~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~ 209 (363)
T cd05628 137 K-------GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM 209 (363)
T ss_pred C-------CCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc
Confidence 7 7899999999975432111000000 0000112347999999999987
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhh
Q 001142 1020 AMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1098 (1142)
Q Consensus 1020 ~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1142)
+ ..++.++|||||||++|||++|+.||.+....+....+..... ...+. .
T Consensus 210 ~----~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~ 260 (363)
T cd05628 210 Q----TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP-------------------------E 260 (363)
T ss_pred C----CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCC-------------------------c
Confidence 6 5688999999999999999999999998777776666643221 11110 0
Q ss_pred hhhHHHHHHHHHHhcc--cCCCCCCCHHHHHHHHHhhcC
Q 001142 1099 LETLSFLVDVFRRCTE--ENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1099 ~~~~~~L~dLI~~CL~--~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
...++.+.+++.+|+. .++..||+++||++|+|+...
T Consensus 261 ~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~hp~f~~~ 299 (363)
T cd05628 261 VPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGV 299 (363)
T ss_pred CCCCHHHHHHHHHHcCChhhcCCCCCHHHHhCCCCCCCC
Confidence 1234568888888654 233356899999999999754
No 50
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.8e-37 Score=356.05 Aligned_cols=258 Identities=26% Similarity=0.322 Sum_probs=218.8
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.+.|...+++|+|+||.++++++ .+..+++|.+.+...... ..+. +.+|+.++++++|||||.+++.|.+++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~--~r~~----A~~E~~lis~~~hP~iv~y~ds~~~~~ 76 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEP--ERRS----AIQEMDLLSKLLHPNIVEYKDSFEEDG 76 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCch--hhHH----HHHHHHHHHhccCCCeeeeccchhcCC
Confidence 46799999999999999999887 455677887666654332 2223 379999999999999999999998866
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. ..+|||+||+||++.+.|.+. ....++++.+..|+.|++.|++|||+++|+|||||+.|||++
T Consensus 77 ~-------------~l~Ivm~Y~eGg~l~~~i~~~---k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt 140 (426)
T KOG0589|consen 77 Q-------------LLCIVMEYCEGGDLAQLIKEQ---KGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT 140 (426)
T ss_pred c-------------eEEEEEeecCCCCHHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc
Confidence 4 259999999999999999873 246799999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ ..|+|+|||+|+.+..... .....+||+.||.||++.+ .+|+.|+|||||||++|||
T Consensus 141 k~-------~~VkLgDfGlaK~l~~~~~----------~a~tvvGTp~YmcPEil~d----~pYn~KSDiWsLGC~~yEm 199 (426)
T KOG0589|consen 141 KD-------KKVKLGDFGLAKILNPEDS----------LASTVVGTPYYMCPEILSD----IPYNEKSDIWSLGCCLYEM 199 (426)
T ss_pred cc-------CceeecchhhhhhcCCchh----------hhheecCCCcccCHHHhCC----CCCCccCcchhhcchHHHH
Confidence 88 6789999999998765321 1235789999999999987 7899999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++-+++|.+.+...+...|..+...+++. .++.+++.++..||+.+|..||++
T Consensus 200 ~~lk~aF~a~~m~~Li~ki~~~~~~Plp~---------------------------~ys~el~~lv~~~l~~~P~~RPsa 252 (426)
T KOG0589|consen 200 CTLKPAFKASNMSELILKINRGLYSPLPS---------------------------MYSSELRSLVKSMLRKNPEHRPSA 252 (426)
T ss_pred HhcccccCccchHHHHHHHhhccCCCCCc---------------------------cccHHHHHHHHHHhhcCCccCCCH
Confidence 99999999988888888886665433332 566779999999999999999999
Q ss_pred HHHHHHHHhh
Q 001142 1124 GDLYEMFVAR 1133 (1142)
Q Consensus 1124 ~EVL~~L~~~ 1133 (1142)
.++|.++...
T Consensus 253 ~~LL~~P~l~ 262 (426)
T KOG0589|consen 253 LELLRRPHLL 262 (426)
T ss_pred HHHhhChhhh
Confidence 9999987654
No 51
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.8e-37 Score=340.76 Aligned_cols=275 Identities=25% Similarity=0.305 Sum_probs=218.8
Q ss_pred CCCCCcceeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
..+..|++.++||+|.-|+||+|+..+ ...|+||. ++.. -..+.-..+++.|-+||+.+.||.++.+|+.|+.
T Consensus 74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVm--dK~~---l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet 148 (459)
T KOG0610|consen 74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVM--DKES---LASRKKLKRAQTEREILSLLDHPFLPTLYASFET 148 (459)
T ss_pred cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEe--cHHH---HhhhhHHHHHHHHHHHHHhcCCCccchhhheeec
Confidence 345678999999999999999999866 56777774 3221 1112223456789999999999999999999998
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
+++. |+|||||+||+|..+.++ +....+++..++.++..|+.||+|||-.|||+|||||+|||
T Consensus 149 ~~~~--------------cl~meyCpGGdL~~Lrqk---Qp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENIL 211 (459)
T KOG0610|consen 149 DKYS--------------CLVMEYCPGGDLHSLRQK---QPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENIL 211 (459)
T ss_pred ccee--------------EEEEecCCCccHHHHHhh---CCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeE
Confidence 8755 999999999999999987 55678999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCccccccccc---------------------cc-------c-c-----------------
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLH---------------------TC-------C-I----------------- 995 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~---------------------~~-------~-~----------------- 995 (1142)
|.++ |++.|+||.++......-. .+ . .
T Consensus 212 vred-------GHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~ 284 (459)
T KOG0610|consen 212 VRED-------GHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELV 284 (459)
T ss_pred EecC-------CcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhh
Confidence 9888 9999999999864311000 00 0 0
Q ss_pred ccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHh
Q 001142 996 AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELE 1075 (1142)
Q Consensus 996 ~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~ 1075 (1142)
++........++||-.|.|||++.+ ...+.++|+|+|||++|||+.|+.||.+.+..+.+..|..... .++.
T Consensus 285 aep~~~RSnSFVGThEYlAPEvI~G----~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l-~Fp~--- 356 (459)
T KOG0610|consen 285 AEPTGARSNSFVGTHEYLAPEVIRG----EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL-KFPE--- 356 (459)
T ss_pred cCCCCccccccccccccccceeeec----CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC-cCCC---
Confidence 0011123456799999999999997 5678999999999999999999999999888877766643221 1110
Q ss_pred hhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC----HHHHHHHHHhhcCCC
Q 001142 1076 ALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT----AGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1076 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS----a~EVL~~L~~~~ss~ 1137 (1142)
. ...+..++|||+++|.+||.+|.. |.||-+|+||+.--|
T Consensus 357 ---------------------~-~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnW 400 (459)
T KOG0610|consen 357 ---------------------E-PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNW 400 (459)
T ss_pred ---------------------C-CcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCCh
Confidence 0 145667999999999999999998 999999999987654
No 52
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=8.7e-37 Score=354.88 Aligned_cols=268 Identities=21% Similarity=0.254 Sum_probs=205.1
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||+||+|++ .+..+|+|+....... ..... ..+.+|+.++..++||||+++++++.+..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~- 74 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML-EKEQV----AHVRAERDILAEADNPWVVKLYYSFQDEN- 74 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHH----HHHHHHHHHHHhCCCCCCcceEEEEEcCC-
Confidence 4789999999999999999998 4667888886532111 11112 23478999999999999999999998755
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~E~~~~g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~ 136 (364)
T cd05599 75 -------------YLYLIMEYLPGGDMMTLLMK-----KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA 136 (364)
T ss_pred -------------eEEEEECCCCCcHHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC
Confidence 34999999999999999875 346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccC----------------------------CCCCCCCccCCCcccchh
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHR----------------------------GIPAPDVCVGTPRWMAPE 1016 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~----------------------------~~~~~~~~~GT~~Y~APE 1016 (1142)
+ +.++|+|||++..+............ ........+||+.|+|||
T Consensus 137 ~-------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 209 (364)
T cd05599 137 K-------GHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPE 209 (364)
T ss_pred C-------CCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHH
Confidence 7 78999999998754321110000000 000011246999999999
Q ss_pred hhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CchhHHhhhcccccccccccCCCCCCc
Q 001142 1017 VLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRP-RLTDELEALGSCHEHEVAQSGSGFEKP 1095 (1142)
Q Consensus 1017 ~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p-~l~~~l~~~~~~~~~~~~~~~~~~~~~ 1095 (1142)
++.. ..++.++|||||||++|||++|..||.+.+..+....+...... ..+.
T Consensus 210 ~~~~----~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~----------------------- 262 (364)
T cd05599 210 VFLQ----TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPD----------------------- 262 (364)
T ss_pred HHcC----CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCC-----------------------
Confidence 9875 56889999999999999999999999887776665555332210 0000
Q ss_pred hhhhhhHHHHHHHHHHhcccCCCCCCC---HHHHHHHHHhhcC
Q 001142 1096 EAELETLSFLVDVFRRCTEENPTERPT---AGDLYEMFVARTS 1135 (1142)
Q Consensus 1096 ~~~~~~~~~L~dLI~~CL~~DP~~RPS---a~EVL~~L~~~~s 1135 (1142)
....++.+.++|.+|+. +|.+|++ +.|+++|+|++..
T Consensus 263 --~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~ 302 (364)
T cd05599 263 --EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV 302 (364)
T ss_pred --CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 01345678999999996 9999997 9999999998653
No 53
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=8.3e-37 Score=347.91 Aligned_cols=248 Identities=24% Similarity=0.297 Sum_probs=197.0
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 815 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 815 LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
||+|+||.||+|++. +..+|+|+...... ....... .+.+|+.++++++||||+++++++...+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------- 66 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI-VSRSEVT----HTLAERTVLAQVNCPFIVPLKFSFQSPE--------- 66 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHH----HHHHHHHHHHhCCCCcEeceeeEEecCC---------
Confidence 799999999999984 55678887542211 1112222 3378999999999999999999987654
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 972 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~ 972 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 67 -----~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~------- 129 (312)
T cd05585 67 -----KLYLVLAFINGGELFHHLQR-----EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQ------- 129 (312)
T ss_pred -----eEEEEEcCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCC-------
Confidence 34999999999999999875 3468999999999999999999999999999999999999877
Q ss_pred CeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001142 973 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1052 (1142)
Q Consensus 973 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~ 1052 (1142)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 130 ~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslGvil~el~tg~~pf~~ 195 (312)
T cd05585 130 GHIALCDFGLCKLNMKDD----------DKTNTFCGTPEYLAPELLLG----HGYTKAVDWWTLGVLLYEMLTGLPPFYD 195 (312)
T ss_pred CcEEEEECcccccCccCC----------CccccccCCcccCCHHHHcC----CCCCCccceechhHHHHHHHhCCCCcCC
Confidence 789999999986432211 11123468999999999876 5688999999999999999999999988
Q ss_pred CCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC---CHHHHHHH
Q 001142 1053 LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP---TAGDLYEM 1129 (1142)
Q Consensus 1053 ~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP---Sa~EVL~~ 1129 (1142)
....+....+..... .++ ...++.+.+++.+||+.||.+|| ++.|++.|
T Consensus 196 ~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 196 ENVNEMYRKILQEPL-RFP---------------------------DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CCHHHHHHHHHcCCC-CCC---------------------------CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 776666555443221 100 13456789999999999999997 68999999
Q ss_pred HHhhcC
Q 001142 1130 FVARTS 1135 (1142)
Q Consensus 1130 L~~~~s 1135 (1142)
+|+...
T Consensus 248 p~~~~~ 253 (312)
T cd05585 248 PFFSQL 253 (312)
T ss_pred CCcCCC
Confidence 998753
No 54
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4e-36 Score=341.28 Aligned_cols=287 Identities=18% Similarity=0.237 Sum_probs=207.6
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+..+++|++.++||+|+||.||+|++. +..+|+|..+.... . ..... +.+|+.++++++||||+++++++.
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~-~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~ 74 (309)
T cd07872 2 FGKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--E-GAPCT----AIREVSLLKDLKHANIVTLHDIVH 74 (309)
T ss_pred CCCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--C-Ccchh----HHHHHHHHHhCCCCCcceEEEEEe
Confidence 345678999999999999999999874 55678887543321 1 11112 268999999999999999999988
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
.++ ..++||||++ ++|.+++... ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 75 ~~~--------------~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Ni 135 (309)
T cd07872 75 TDK--------------SLTLVFEYLD-KDLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNL 135 (309)
T ss_pred eCC--------------eEEEEEeCCC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHE
Confidence 655 3499999997 5888887652 24588999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||.+........ ......+|+.|+|||++.+ ...++.++|||||||++
T Consensus 136 ll~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il 195 (309)
T cd07872 136 LINER-------GELKLADFGLARAKSVPTK----------TYSNEVVTLWYRPPDVLLG---SSEYSTQIDMWGVGCIF 195 (309)
T ss_pred EECCC-------CCEEECccccceecCCCcc----------ccccccccccccCCHHHhC---CCCCCcHHHHHHHHHHH
Confidence 99877 7899999999865432111 1123357899999999865 24578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCC--chhhhhhHHHHHHHHHHhcccCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK--PEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
|+|++|+.||.+.+..+....+...........+.................... .......++++.+++.+||+.||.
T Consensus 196 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~ 275 (309)
T cd07872 196 FEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESK 275 (309)
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChh
Confidence 999999999988776655544433222222211111100000000000000000 001113566789999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001142 1119 ERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~s 1135 (1142)
+|||+.|+++|+|++.-
T Consensus 276 ~R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 276 KRISAEEAMKHAYFRSL 292 (309)
T ss_pred hCCCHHHHhcChhhhhc
Confidence 99999999999999864
No 55
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.1e-36 Score=348.71 Aligned_cols=250 Identities=26% Similarity=0.324 Sum_probs=198.1
Q ss_pred eeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~-----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
++||+|+||.||+|+. .+..+|+|+............ ...+..|+.++++++||||+++++++..++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~----~~~~~~E~~il~~l~hp~iv~~~~~~~~~~---- 73 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKD----TAHTKAERNILEAVKHPFIVDLIYAFQTGG---- 73 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhh----HHHHHHHHHHHHhCCCCchhceeeEEecCC----
Confidence 6899999999999986 356788888643211111111 123468999999999999999999988655
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
..|+||||+++++|.+++.. ...+.+..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 74 ----------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~-- 136 (323)
T cd05584 74 ----------KLYLILEYLSGGELFMHLER-----EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQ-- 136 (323)
T ss_pred ----------eEEEEEeCCCCchHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--
Confidence 34999999999999999875 3468889999999999999999999999999999999999887
Q ss_pred cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1047 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~ 1047 (1142)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 137 -----~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ell~G~ 197 (323)
T cd05584 137 -----GHVKLTDFGLCKESIHEG----------TVTHTFCGTIEYMAPEILMR----SGHGKAVDWWSLGALMYDMLTGA 197 (323)
T ss_pred -----CCEEEeeCcCCeecccCC----------CcccccCCCccccChhhccC----CCCCCcceecccHHHHHHHhcCC
Confidence 789999999986432111 01123468999999999875 45789999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----C
Q 001142 1048 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----T 1122 (1142)
Q Consensus 1048 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-----S 1122 (1142)
.||.+.........+..+... ++ ...++.+.+++.+||+.||++|| +
T Consensus 198 ~pf~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 249 (323)
T cd05584 198 PPFTAENRKKTIDKILKGKLN-LP---------------------------PYLTPEARDLLKKLLKRNPSSRLGAGPGD 249 (323)
T ss_pred CCCCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHcccCHhHcCCCCCCC
Confidence 999887766655555433211 10 13455689999999999999999 8
Q ss_pred HHHHHHHHHhhc
Q 001142 1123 AGDLYEMFVART 1134 (1142)
Q Consensus 1123 a~EVL~~L~~~~ 1134 (1142)
+.++++|+|+..
T Consensus 250 ~~~l~~h~~~~~ 261 (323)
T cd05584 250 AAEVQSHPFFRH 261 (323)
T ss_pred HHHHhcCCCcCC
Confidence 999999999864
No 56
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.1e-36 Score=349.80 Aligned_cols=249 Identities=24% Similarity=0.349 Sum_probs=197.9
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 890 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~ 890 (1142)
+.||+|+||.||+|+. .+..+|+|+...... ....... .+.+|+.+++.++||||+++++++...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~~------- 68 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI-IAKDEVA----HTLTESRVLKNTRHPFLTSLKYSFQTKD------- 68 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHH----HHHHHHHHHHhCCCCCCcceEEEEEcCC-------
Confidence 4799999999999987 466788888643221 1112222 3378999999999999999999988655
Q ss_pred CCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCC
Q 001142 891 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 970 (1142)
Q Consensus 891 ~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~ 970 (1142)
..++||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 69 -------~~~lv~Ey~~~g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~----- 131 (328)
T cd05593 69 -------RLCFVMEYVNGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKD----- 131 (328)
T ss_pred -------EEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCC-----
Confidence 34999999999999988865 3468999999999999999999999999999999999999877
Q ss_pred CCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001142 971 GKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPY 1050 (1142)
Q Consensus 971 ~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf 1050 (1142)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus 132 --~~~kL~DfG~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~elltG~~Pf 195 (328)
T cd05593 132 --GHIKITDFGLCKEGITDA----------ATMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPF 195 (328)
T ss_pred --CcEEEecCcCCccCCCcc----------cccccccCCcCccChhhhcC----CCCCccCCccccchHHHHHhhCCCCC
Confidence 789999999986432111 01123468999999999875 56789999999999999999999999
Q ss_pred CCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHHH
Q 001142 1051 MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAGD 1125 (1142)
Q Consensus 1051 ~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-----Sa~E 1125 (1142)
.+.+..+....+..... .++ ...++.+.+++.+||+.||.+|| ++.|
T Consensus 196 ~~~~~~~~~~~~~~~~~-~~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ 247 (328)
T cd05593 196 YNQDHEKLFELILMEDI-KFP---------------------------RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKE 247 (328)
T ss_pred CCCCHHHHHHHhccCCc-cCC---------------------------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 87666655554432211 110 13456789999999999999997 8999
Q ss_pred HHHHHHhhc
Q 001142 1126 LYEMFVART 1134 (1142)
Q Consensus 1126 VL~~L~~~~ 1134 (1142)
+++|+|+..
T Consensus 248 il~h~~~~~ 256 (328)
T cd05593 248 IMRHSFFTG 256 (328)
T ss_pred HhcCCCcCC
Confidence 999999865
No 57
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.5e-36 Score=348.41 Aligned_cols=258 Identities=24% Similarity=0.271 Sum_probs=198.2
Q ss_pred CcceeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 881 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~-----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~ 881 (1142)
+|++.++||+|+||.||+|+. .+..+|+|+............. ..+.+|+.++.++ +||||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~~ 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTV----EHTRTERNVLEHVRQSPFLVTLHYAFQT 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHH----HHHHHHHHHHHhccCCCCcccEEEEEec
Confidence 589999999999999999986 3567889886432111111112 2347899999999 49999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 77 ~~--------------~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil 137 (332)
T cd05614 77 EA--------------KLHLILDYVSGGEMFTHLYQ-----RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENIL 137 (332)
T ss_pred CC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeE
Confidence 54 34999999999999999875 346899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||+++........ ......||+.|+|||++.+ ...++.++|||||||++|
T Consensus 138 i~~~-------~~~kl~DfG~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~ 198 (332)
T cd05614 138 LDSE-------GHVVLTDFGLSKEFLSEEKE---------RTYSFCGTIEYMAPEIIRG---KGGHGKAVDWWSLGILIF 198 (332)
T ss_pred ECCC-------CCEEEeeCcCCccccccCCC---------ccccccCCccccCHHHhcC---CCCCCCccccccchhhhh
Confidence 9887 78999999998754321111 1123468999999999875 234678999999999999
Q ss_pred HHHhCCCCCCCCC----HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1042 ELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
||++|+.||.... ...+...+.... +.++ ...++.+.+++.+||+.||
T Consensus 199 elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~---------------------------~~~~~~~~~li~~~l~~dp 250 (332)
T cd05614 199 ELLTGASPFTLEGERNTQSEVSRRILKCD-PPFP---------------------------SFIGPEAQDLLHKLLRKDP 250 (332)
T ss_pred hhhcCCCCCCCCCCCCCHHHHHHHHhcCC-CCCC---------------------------CCCCHHHHHHHHHHcCCCH
Confidence 9999999996432 122222222111 1100 1345668999999999999
Q ss_pred CCCC-----CHHHHHHHHHhhcC
Q 001142 1118 TERP-----TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1118 ~~RP-----Sa~EVL~~L~~~~s 1135 (1142)
++|| +++++++|+|+...
T Consensus 251 ~~R~~~~~~~~~~~l~h~~~~~~ 273 (332)
T cd05614 251 KKRLGAGPQGASEIKEHPFFKGL 273 (332)
T ss_pred HHcCCCCCCCHHHHHcCCCcCCC
Confidence 9999 88999999998753
No 58
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.4e-36 Score=348.17 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=198.1
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 890 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~ 890 (1142)
+.||+|+||.||+++. .+..+|+|+....... ...... .+.+|+.++++++||||+++++++...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~----~~~~E~~~l~~l~hp~i~~~~~~~~~~~------- 68 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVA----HTVTESRVLQNTRHPFLTALKYAFQTHD------- 68 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHH----HHHHHHHHHHhCCCCCCcceeeEEecCC-------
Confidence 4799999999999987 4667888886533211 112222 2368999999999999999999988654
Q ss_pred CCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCC
Q 001142 891 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 970 (1142)
Q Consensus 891 ~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~ 970 (1142)
..++||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 69 -------~~~lv~E~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----- 131 (323)
T cd05595 69 -------RLCFVMEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD----- 131 (323)
T ss_pred -------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCC-----
Confidence 34999999999999988865 3468999999999999999999999999999999999999887
Q ss_pred CCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001142 971 GKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPY 1050 (1142)
Q Consensus 971 ~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf 1050 (1142)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 132 --~~~kL~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~ell~g~~Pf 195 (323)
T cd05595 132 --GHIKITDFGLCKEGISDG----------ATMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPF 195 (323)
T ss_pred --CCEEecccHHhccccCCC----------CccccccCCcCcCCcccccC----CCCCchhchhhhHHHHHHHHhCCCCC
Confidence 789999999986432111 01123468999999999875 56789999999999999999999999
Q ss_pred CCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHHH
Q 001142 1051 MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAGD 1125 (1142)
Q Consensus 1051 ~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-----Sa~E 1125 (1142)
...+.......+..... .++ ...++.+.+++.+||+.||.+|| ++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~-~~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ 247 (323)
T cd05595 196 YNQDHERLFELILMEEI-RFP---------------------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 247 (323)
T ss_pred CCCCHHHHHHHHhcCCC-CCC---------------------------CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHH
Confidence 87766665555432211 000 13456789999999999999998 9999
Q ss_pred HHHHHHhhc
Q 001142 1126 LYEMFVART 1134 (1142)
Q Consensus 1126 VL~~L~~~~ 1134 (1142)
+++|+|+..
T Consensus 248 ~l~h~~~~~ 256 (323)
T cd05595 248 VMEHRFFLS 256 (323)
T ss_pred HHcCCCcCC
Confidence 999999864
No 59
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.4e-38 Score=354.09 Aligned_cols=248 Identities=26% Similarity=0.419 Sum_probs=202.8
Q ss_pred CCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.|+...-.+-||.|+.|.||+|+..+..||||.++ +.+ ..+|.-|++|+||||+.|.|+|....
T Consensus 122 PFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~---------elk------ETdIKHLRkLkH~NII~FkGVCtqsP- 185 (904)
T KOG4721|consen 122 PFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVR---------ELK------ETDIKHLRKLKHPNIITFKGVCTQSP- 185 (904)
T ss_pred CHHHhhhhhhhccCcccceeeeeccCceehhHHHh---------hhh------hhhHHHHHhccCcceeeEeeeecCCc-
Confidence 34455566789999999999999999999988532 111 35788899999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.+|||||||+.|-|+.+++. ...++......|..+||.|+.|||.+.|||||||.-||||..
T Consensus 186 -------------cyCIiMEfCa~GqL~~VLka-----~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~ 247 (904)
T KOG4721|consen 186 -------------CYCIIMEFCAQGQLYEVLKA-----GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY 247 (904)
T ss_pred -------------eeEEeeeccccccHHHHHhc-----cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec
Confidence 44999999999999999986 457888999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ ..|||+|||-++...... ....++||..|||||++.. .+.+.|+||||||||||||+
T Consensus 248 ~-------d~VKIsDFGTS~e~~~~S-----------TkMSFaGTVaWMAPEvIrn----ePcsEKVDIwSfGVVLWEmL 305 (904)
T KOG4721|consen 248 D-------DVVKISDFGTSKELSDKS-----------TKMSFAGTVAWMAPEVIRN----EPCSEKVDIWSFGVVLWEML 305 (904)
T ss_pred c-------ceEEeccccchHhhhhhh-----------hhhhhhhhHhhhCHHHhhc----CCcccccceehhHHHHHHHH
Confidence 8 789999999998765532 2235789999999999987 67899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
||..||.+.+... |.++.....- ....+..+++.++-|++.||+-.|..||++.
T Consensus 306 T~EiPYkdVdssA----IIwGVGsNsL----------------------~LpvPstcP~GfklL~Kqcw~sKpRNRPSFr 359 (904)
T KOG4721|consen 306 TGEIPYKDVDSSA----IIWGVGSNSL----------------------HLPVPSTCPDGFKLLLKQCWNSKPRNRPSFR 359 (904)
T ss_pred hcCCCccccchhe----eEEeccCCcc----------------------cccCcccCchHHHHHHHHHHhcCCCCCccHH
Confidence 9999998654332 2232221110 0001126778899999999999999999999
Q ss_pred HHHHHHHhhc
Q 001142 1125 DLYEMFVART 1134 (1142)
Q Consensus 1125 EVL~~L~~~~ 1134 (1142)
+++.|+....
T Consensus 360 qil~HldIa~ 369 (904)
T KOG4721|consen 360 QILLHLDIAS 369 (904)
T ss_pred HHHHHHhhcC
Confidence 9999987653
No 60
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=6.8e-36 Score=336.02 Aligned_cols=252 Identities=20% Similarity=0.260 Sum_probs=199.5
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
..||+|++|.||+|.+++..+|+|+..... ... +.+...+.+|+.+|++++|||||++++++.+..
T Consensus 26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~--~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~--------- 91 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFH--KGH---KVLIDITENEIKNLRRIDSNNILKIYGFIIDIV--------- 91 (283)
T ss_pred eEEeeCCceEEEEEEECCEEEEEEeccccc--ccc---HHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc---------
Confidence 679999999999999999999999854321 111 112223479999999999999999999987511
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeeeccccccCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILIDLERKKADG 971 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NILld~~~~~~~~ 971 (1142)
......++||||+++|+|.+++.. ...+++.....++.|++.||.|||+ .+++||||||+|||++.+
T Consensus 92 -~~~~~~~lv~Ey~~~g~L~~~l~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~------ 159 (283)
T PHA02988 92 -DDLPRLSLILEYCTRGYLREVLDK-----EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN------ 159 (283)
T ss_pred -cCCCceEEEEEeCCCCcHHHHHhh-----CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCC------
Confidence 011246999999999999999975 3468899999999999999999998 499999999999999987
Q ss_pred CCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 001142 972 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYM 1051 (1142)
Q Consensus 972 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~ 1051 (1142)
+.+||+|||+++...... ....|+..|+|||++.+. ...++.++|||||||++|||++|+.||.
T Consensus 160 -~~~kl~dfg~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~--~~~~~~k~Di~SlGvil~el~~g~~Pf~ 223 (283)
T PHA02988 160 -YKLKIICHGLEKILSSPP-------------FKNVNFMVYFSYKMLNDI--FSEYTIKDDIYSLGVVLWEIFTGKIPFE 223 (283)
T ss_pred -CcEEEcccchHhhhcccc-------------ccccCcccccCHHHhhhc--cccccchhhhhHHHHHHHHHHHCCCCCC
Confidence 789999999987543211 123588999999998652 1468899999999999999999999999
Q ss_pred CCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 001142 1052 GLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF 1130 (1142)
Q Consensus 1052 ~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L 1130 (1142)
+.+..++...+... ..+..+ ...++.+.+++.+||+.||++|||+.|+++.+
T Consensus 224 ~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l 276 (283)
T PHA02988 224 NLTTKEIYDLIINKNNSLKLP---------------------------LDCPLEIKCIVEACTSHDSIKRPNIKEILYNL 276 (283)
T ss_pred CCCHHHHHHHHHhcCCCCCCC---------------------------CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 87777766665322 221111 13456799999999999999999999999987
Q ss_pred Hhh
Q 001142 1131 VAR 1133 (1142)
Q Consensus 1131 ~~~ 1133 (1142)
..-
T Consensus 277 ~~~ 279 (283)
T PHA02988 277 SLY 279 (283)
T ss_pred HHH
Confidence 643
No 61
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.2e-36 Score=355.87 Aligned_cols=268 Identities=22% Similarity=0.276 Sum_probs=201.4
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||.||+|++ .+..+|+|+...... ...... ..+.+|+.++++++|||||++++++.+...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~----~~~~~E~~il~~l~hp~iv~~~~~~~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM-FKKDQL----AHVKAERDVLAESDSPWVVSLYYSFQDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhHHH----HHHHHHHHHHHhCCCCCcceEEEEEEcCCe
Confidence 4789999999999999999987 456788887542211 011122 234789999999999999999999987553
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.|+||||+++|+|.+++.. ...+++..+..++.|++.||+|||++||+||||||+|||++.
T Consensus 76 --------------~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~ 136 (377)
T cd05629 76 --------------LYLIMEFLPGGDLMTMLIK-----YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR 136 (377)
T ss_pred --------------eEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC
Confidence 4999999999999999875 346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccc--------cccCC-----------------------------CCCCCCcc
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCC--------IAHRG-----------------------------IPAPDVCV 1007 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~--------~~~~~-----------------------------~~~~~~~~ 1007 (1142)
+ +.+||+|||+++.+........ ..... .......+
T Consensus 137 ~-------~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (377)
T cd05629 137 G-------GHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTV 209 (377)
T ss_pred C-------CCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccC
Confidence 7 7899999999964321100000 00000 00001246
Q ss_pred CCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhccccccccc
Q 001142 1008 GTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVA 1086 (1142)
Q Consensus 1008 GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~ 1086 (1142)
||+.|+|||++.+ ..++.++|||||||++|||++|..||.+....+....+.... ...++.
T Consensus 210 gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------- 271 (377)
T cd05629 210 GTPDYIAPEIFLQ----QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPD-------------- 271 (377)
T ss_pred CCccccCHHHHcc----CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCC--------------
Confidence 9999999999875 568899999999999999999999998777666555543221 111100
Q ss_pred ccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC---CCHHHHHHHHHhhcC
Q 001142 1087 QSGSGFEKPEAELETLSFLVDVFRRCTEENPTER---PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1087 ~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R---PSa~EVL~~L~~~~s 1135 (1142)
....+..+.+++.+||. +|.+| +++.|++.|+|+...
T Consensus 272 -----------~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~ 311 (377)
T cd05629 272 -----------DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGV 311 (377)
T ss_pred -----------CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence 00345678999999997 66665 699999999998753
No 62
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.3e-36 Score=350.86 Aligned_cols=267 Identities=24% Similarity=0.315 Sum_probs=206.8
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||+||+|++. +..+|+|+........ .... ..+..|+.++..++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~----~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK-RNQI----AHVRAERDILADADSPWIVKLYYSFQDEE- 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh-ccHH----HHHHHHHHHHHhcCCCCccchhhheecCC-
Confidence 36899999999999999999985 7778888865332111 1122 23478999999999999999999987655
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+.++||||+++++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~ 136 (350)
T cd05573 75 -------------HLYLVMEYMPGGDLMNLLIR-----KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDA 136 (350)
T ss_pred -------------eEEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC
Confidence 34999999999999999976 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccc-------------------cCCCCCCCCccCCCcccchhhhccccCCC
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-------------------HRGIPAPDVCVGTPRWMAPEVLRAMHKPN 1025 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-------------------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 1025 (1142)
+ +.+||+|||++............. ...........||+.|+|||++.+ .
T Consensus 137 ~-------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~ 205 (350)
T cd05573 137 D-------GHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG----T 205 (350)
T ss_pred C-------CCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC----C
Confidence 7 789999999997654322000000 000012234569999999999976 4
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHH
Q 001142 1026 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1104 (1142)
Q Consensus 1026 ~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1142)
.++.++|||||||++|||++|+.||......+....+..... ...+ . ....++.
T Consensus 206 ~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p------------------------~-~~~~~~~ 260 (350)
T cd05573 206 PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFP------------------------P-DPPVSPE 260 (350)
T ss_pred CCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCC------------------------C-CCCCCHH
Confidence 788999999999999999999999988776655555433110 0000 0 0024667
Q ss_pred HHHHHHHhcccCCCCCCC-HHHHHHHHHhhc
Q 001142 1105 LVDVFRRCTEENPTERPT-AGDLYEMFVART 1134 (1142)
Q Consensus 1105 L~dLI~~CL~~DP~~RPS-a~EVL~~L~~~~ 1134 (1142)
+.++|.+||. ||.+||+ ++++++|+|+..
T Consensus 261 ~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 261 AIDLICRLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred HHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 9999999997 9999999 999999999864
No 63
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.5e-36 Score=354.73 Aligned_cols=266 Identities=22% Similarity=0.291 Sum_probs=208.4
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
....+|++.++||+|+||.||+|++. +..+|+|+...... ......+ .+.+|+.+++.++||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~----~~~~e~~il~~~~h~~iv~~~~~~~~ 114 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEM-IKRSDSA----FFWEERDIMAHANSEWIVQLHYAFQD 114 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhhHH----HHHHHHHHHHhCCCCCcceEEEEEec
Confidence 34678999999999999999999984 56788887532111 0111112 23689999999999999999999886
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. +.++||||+++|+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 115 ~~--------------~~~lv~Ey~~gg~L~~~l~~------~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIL 174 (370)
T cd05596 115 DK--------------YLYMVMEYMPGGDLVNLMSN------YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNML 174 (370)
T ss_pred CC--------------EEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 55 35999999999999999865 35888999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||.+........ .......||+.|+|||++.+......++.++|||||||++|
T Consensus 175 l~~~-------~~~kL~DfG~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvily 238 (370)
T cd05596 175 LDKS-------GHLKLADFGTCMKMDANGM---------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 238 (370)
T ss_pred EcCC-------CCEEEEeccceeeccCCCc---------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHH
Confidence 9887 7899999999875432110 11124469999999999876433345889999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC-
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE- 1119 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~- 1119 (1142)
||++|+.||.+.+....+..+..... ...+. ....+..+.+++.+||+.+|.+
T Consensus 239 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~~s~~~~~li~~~L~~~p~r~ 293 (370)
T cd05596 239 EMLVGDTPFYADSLVGTYSKIMDHKNSLTFPD-------------------------DIEISKQAKDLICAFLTDREVRL 293 (370)
T ss_pred HHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCC-------------------------cCCCCHHHHHHHHHHccChhhcc
Confidence 99999999998776666655543221 11100 0134667999999999999988
Q ss_pred -CCCHHHHHHHHHhhcC
Q 001142 1120 -RPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 -RPSa~EVL~~L~~~~s 1135 (1142)
|||++|+++|+|++..
T Consensus 294 ~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 294 GRNGVDEIKSHPFFKND 310 (370)
T ss_pred CCCCHHHHhcCcccCCC
Confidence 9999999999999764
No 64
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.4e-36 Score=352.74 Aligned_cols=267 Identities=22% Similarity=0.276 Sum_probs=199.5
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|++.+.||+|+||+||+|++. +..+|+|+...+.. ...... ..+.+|+.++++++||||+++++++.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~----~~~~~E~~il~~l~h~~iv~l~~~~~~~~-- 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV-LNRNQV----AHVKAERDILAEADNEWVVKLYYSFQDKD-- 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhHHH----HHHHHHHHHHHhcCCCCeeeeEEEEecCC--
Confidence 5889999999999999999984 55678887543211 111222 23478999999999999999999998655
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
+.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 75 ------------~~~lv~E~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~ 137 (381)
T cd05626 75 ------------NLYFVMDYIPGGDMMSLLIR-----MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLD 137 (381)
T ss_pred ------------EEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCC
Confidence 35999999999999999876 2468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccc-------------------------------------cCCCCCCCCccC
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-------------------------------------HRGIPAPDVCVG 1008 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-------------------------------------~~~~~~~~~~~G 1008 (1142)
+.+||+|||++..+.......... ...........|
T Consensus 138 -------~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 210 (381)
T cd05626 138 -------GHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVG 210 (381)
T ss_pred -------CCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccC
Confidence 789999999986432110000000 000001123579
Q ss_pred CCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccc
Q 001142 1009 TPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQ 1087 (1142)
Q Consensus 1009 T~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~ 1087 (1142)
|+.|+|||++.+ ..++.++|||||||++|||++|..||......+....+... .....+.
T Consensus 211 t~~Y~aPE~~~~----~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--------------- 271 (381)
T cd05626 211 TPNYIAPEVLLR----KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPP--------------- 271 (381)
T ss_pred CccccCHHHHcC----CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCC---------------
Confidence 999999999875 56889999999999999999999999876655544443221 1111110
Q ss_pred cCCCCCCchhhhhhHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHhhc
Q 001142 1088 SGSGFEKPEAELETLSFLVDVFRRCT--EENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1088 ~~~~~~~~~~~~~~~~~L~dLI~~CL--~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
....++++.+++.+|+ ..+|..||++.++++|+|+..
T Consensus 272 ----------~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 272 ----------QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred ----------CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence 0134567889998844 556666999999999999875
No 65
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.2e-36 Score=346.05 Aligned_cols=249 Identities=27% Similarity=0.361 Sum_probs=198.0
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.||+|+||+||+|++. +..+|+|+....... .....+. +..|+.++..+ +||||+++++++...+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~----~~~e~~~l~~~~~h~~iv~~~~~~~~~~------ 69 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL-QDDDVEC----TMTEKRILSLARNHPFLTQLYCCFQTPD------ 69 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hccHHHH----HHHHHHHHHhccCCCchhceeeEEEcCC------
Confidence 47999999999999984 567888876432111 1112222 36788888877 6999999999987654
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~iv~Ey~~~g~L~~~i~~-----~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~---- 132 (320)
T cd05590 70 --------RLFFVMEFVNGGDLMFHIQK-----SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE---- 132 (320)
T ss_pred --------EEEEEEcCCCCchHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC----
Confidence 35999999999999998875 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~DfG~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~P 195 (320)
T cd05590 133 ---GHCKLADFGMCKEGIFNG----------KTTSTFCGTPDYIAPEILQE----MLYGPSVDWWAMGVLLYEMLCGHAP 195 (320)
T ss_pred ---CcEEEeeCCCCeecCcCC----------CcccccccCccccCHHHHcC----CCCCCccchhhhHHHHHHHhhCCCC
Confidence 789999999986432111 01123468999999999875 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH------
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA------ 1123 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa------ 1123 (1142)
|.+.+..++...+....... + ...+..+.+++.+||+.||.+||++
T Consensus 196 f~~~~~~~~~~~i~~~~~~~-~---------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~ 247 (320)
T cd05590 196 FEAENEDDLFEAILNDEVVY-P---------------------------TWLSQDAVDILKAFMTKNPTMRLGSLTLGGE 247 (320)
T ss_pred CCCCCHHHHHHHHhcCCCCC-C---------------------------CCCCHHHHHHHHHHcccCHHHCCCCCCCCCH
Confidence 99877777766664432110 0 0345568999999999999999998
Q ss_pred HHHHHHHHhhc
Q 001142 1124 GDLYEMFVART 1134 (1142)
Q Consensus 1124 ~EVL~~L~~~~ 1134 (1142)
+++++|+|+..
T Consensus 248 ~~~~~h~~f~~ 258 (320)
T cd05590 248 EAILRHPFFKE 258 (320)
T ss_pred HHHHcCCCcCC
Confidence 99999999864
No 66
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.4e-37 Score=336.69 Aligned_cols=252 Identities=24% Similarity=0.355 Sum_probs=211.2
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.|-+|.. .+..||+|..+.+...+. .+. -.+.+|++||..|+||||+.+|.+|+..+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkde-qDl----vhIRREIeIMSsLNHPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDE-QDL----VHIRREIEIMSSLNHPHIIQIYEVFENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccH-HHH----HHHHHHHHHHhhcCCCceeehhhhhcCCce
Confidence 5799999999999999999986 467778776443322111 111 234799999999999999999999987664
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+ .|||||..+|.|++|+.. ...+++.+++.+++||+.|+.|+|.++++|||||.+|||+|.
T Consensus 128 I--------------vivMEYaS~GeLYDYiSe-----r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~ 188 (668)
T KOG0611|consen 128 I--------------VIVMEYASGGELYDYISE-----RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQ 188 (668)
T ss_pred E--------------EEEEEecCCccHHHHHHH-----hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecC
Confidence 4 999999999999999987 467999999999999999999999999999999999999999
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC-CchhhHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY-GLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~-s~ksDVwSLGviL~EL 1043 (1142)
+ +++||+|||++..+.... -..+++|+|.|.+||++.+ .+| ++.+|.|||||+||.|
T Consensus 189 N-------~NiKIADFGLSNly~~~k-----------fLqTFCGSPLYASPEIvNG----~PY~GPEVDsWsLGvLLYtL 246 (668)
T KOG0611|consen 189 N-------NNIKIADFGLSNLYADKK-----------FLQTFCGSPLYASPEIVNG----TPYKGPEVDSWSLGVLLYTL 246 (668)
T ss_pred C-------CCeeeeccchhhhhcccc-----------HHHHhcCCcccCCccccCC----CCCCCCccchhhHHHHHHHH
Confidence 8 889999999997654321 1236789999999999987 344 6899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
..|..||++.+...+..+|..+..... ..+....-||+.||..+|++|.|+
T Consensus 247 VyGtMPFDG~Dhk~lvrQIs~GaYrEP-----------------------------~~PSdA~gLIRwmLmVNP~RRATi 297 (668)
T KOG0611|consen 247 VYGTMPFDGRDHKRLVRQISRGAYREP-----------------------------ETPSDASGLIRWMLMVNPERRATI 297 (668)
T ss_pred hhcccccCCchHHHHHHHhhcccccCC-----------------------------CCCchHHHHHHHHHhcCcccchhH
Confidence 999999999888888888877764321 223346778999999999999999
Q ss_pred HHHHHHHHhh
Q 001142 1124 GDLYEMFVAR 1133 (1142)
Q Consensus 1124 ~EVL~~L~~~ 1133 (1142)
.+|..|+|.-
T Consensus 298 eDiAsHWWvN 307 (668)
T KOG0611|consen 298 EDIASHWWVN 307 (668)
T ss_pred HHHhhhheee
Confidence 9999999974
No 67
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3e-36 Score=345.11 Aligned_cols=252 Identities=27% Similarity=0.366 Sum_probs=198.7
Q ss_pred cceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHH---hhCCCCCccceeeeEecCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRML---GALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL---~~L~HpNIVkl~g~~~~~~ 883 (1142)
|++.+.||+|+||.||+|.+. +..+|+|+.+.... ......+ .+.+|++++ +.++||||+++++++...+
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~----~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDI-IARDEVE----SLMCEKRIFETANSERHPFLVNLFACFQTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHH----HHHHHHHHHHhccccCCCChhceeeEEEcCC
Confidence 688999999999999999884 56788888653211 1111122 235666554 5667999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
+.|+||||+++++|..+++. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 76 --------------~~~lv~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~ 135 (324)
T cd05589 76 --------------HVCFVMEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD 135 (324)
T ss_pred --------------EEEEEEcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC
Confidence 45999999999999888754 4689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 136 ~~-------~~~kL~Dfg~~~~~~~~~----------~~~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslG~il~el 194 (324)
T cd05589 136 TE-------GFVKIADFGLCKEGMGFG----------DRTSTFCGTPEFLAPEVLTE----TSYTRAVDWWGLGVLIYEM 194 (324)
T ss_pred CC-------CcEEeCcccCCccCCCCC----------CcccccccCccccCHhHhcC----CCCCcccchhhHHHHHHHH
Confidence 87 789999999986432211 11224568999999999876 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC--
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-- 1121 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-- 1121 (1142)
++|+.||.+.+..+....+...... .+ ...++.+.+++.+||+.||.+||
T Consensus 195 ~~G~~pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 195 LVGESPFPGDDEEEVFDSIVNDEVR-YP---------------------------RFLSREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 9999999987776666665443211 00 03456689999999999999999
Q ss_pred ---CHHHHHHHHHhhc
Q 001142 1122 ---TAGDLYEMFVART 1134 (1142)
Q Consensus 1122 ---Sa~EVL~~L~~~~ 1134 (1142)
++.++++|+|++.
T Consensus 247 ~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 247 GEKDAEDVKKQPFFRD 262 (324)
T ss_pred CCCCHHHHhhCCCcCC
Confidence 7999999999865
No 68
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=9.3e-36 Score=360.50 Aligned_cols=270 Identities=24% Similarity=0.316 Sum_probs=211.6
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
-.+|++.+.||+|+||+||+|++ .+..+|+|+...+. ........ +.+|+.++..++|+||+++++.+...+
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~--~~~~~~~~----~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEG--MSEADKNR----AQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEeccc--CCHHHHHH----HHHHHHHHhcCCCCcEEEeecceeccc
Confidence 35899999999999999999987 56788888865432 22333333 378999999999999999988776432
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. ........++||||+++|+|.+++..... ....+++..+..++.|++.||.|||++||+||||||+|||++
T Consensus 105 ~~------~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~ 177 (496)
T PTZ00283 105 PR------NPENVLMIALVLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC 177 (496)
T ss_pred cc------CcccceEEEEEEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe
Confidence 11 11123346899999999999999975332 235689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+++.+...... .......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 178 ~~-------~~vkL~DFGls~~~~~~~~~--------~~~~~~~Gt~~Y~aPE~~~~----~~~s~k~DVwSlGvilyeL 238 (496)
T PTZ00283 178 SN-------GLVKLGDFGFSKMYAATVSD--------DVGRTFCGTPYYVAPEIWRR----KPYSKKADMFSLGVLLYEL 238 (496)
T ss_pred CC-------CCEEEEecccCeeccccccc--------cccccccCCcceeCHHHhCC----CCCCcHHHHHHHHHHHHHH
Confidence 87 78999999999765432111 11224569999999999876 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||.+....++...+..+....++ ...++.+.+++.+||+.||.+||++
T Consensus 239 ltG~~Pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~L~~dP~~RPs~ 291 (496)
T PTZ00283 239 LTLKRPFDGENMEEVMHKTLAGRYDPLP---------------------------PSISPEMQEIVTALLSSDPKRRPSS 291 (496)
T ss_pred HHCCCCCCCCCHHHHHHHHhcCCCCCCC---------------------------CCCCHHHHHHHHHHcccChhhCcCH
Confidence 9999999887776666655443322211 1445679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001142 1124 GDLYEMFVART 1134 (1142)
Q Consensus 1124 ~EVL~~L~~~~ 1134 (1142)
.++++|+|.+.
T Consensus 292 ~ell~~p~~~~ 302 (496)
T PTZ00283 292 SKLLNMPICKL 302 (496)
T ss_pred HHHHhCHHHHH
Confidence 99999988653
No 69
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.9e-36 Score=344.23 Aligned_cols=254 Identities=25% Similarity=0.319 Sum_probs=200.7
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC-CCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH-SCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H-pNIVkl~g~~~~~~~ 884 (1142)
+|++.+.||+|+||.||+|++. +..+|+|+....... .....+. +..|++++..+.| ++|+++++++.+.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~~----~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII-QDDDVEC----TMVEKRVLALPGKPPFLTQLHSCFQTMD- 74 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHH----HHHHHHHHHhcCCCCceeeeEEEEEcCC-
Confidence 5899999999999999999985 456888886533211 1122222 3689999999975 56888888887654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..|+||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~ 136 (324)
T cd05587 75 -------------RLYFVMEYVNGGDLMYHIQQ-----VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA 136 (324)
T ss_pred -------------EEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC
Confidence 35999999999999999875 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 137 ~-------~~~kL~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~ell 195 (324)
T cd05587 137 E-------GHIKIADFGMCKENIFGG----------KTTRTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVLLYEML 195 (324)
T ss_pred C-------CCEEEeecCcceecCCCC----------CceeeecCCccccChhhhcC----CCCCcccchhhhHHHHHHHH
Confidence 7 789999999986422111 01123468999999999876 56789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH-
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA- 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa- 1123 (1142)
+|+.||.+.+..+....+..... ..+ ...+..+.+++.+||+.||.+|+++
T Consensus 196 tG~~pf~~~~~~~~~~~i~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (324)
T cd05587 196 AGQPPFDGEDEDELFQSIMEHNV-SYP---------------------------KSLSKEAVSICKGLLTKHPAKRLGCG 247 (324)
T ss_pred hCCCCCCCCCHHHHHHHHHcCCC-CCC---------------------------CCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence 99999998777766666543321 111 0345568999999999999999976
Q ss_pred ----HHHHHHHHhhc
Q 001142 1124 ----GDLYEMFVART 1134 (1142)
Q Consensus 1124 ----~EVL~~L~~~~ 1134 (1142)
+++++|+|++.
T Consensus 248 ~~~~~~~~~hp~~~~ 262 (324)
T cd05587 248 PTGERDIREHAFFRR 262 (324)
T ss_pred CCCHHHHhcCCCcCC
Confidence 89999999865
No 70
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=9.1e-36 Score=332.75 Aligned_cols=260 Identities=22% Similarity=0.360 Sum_probs=203.8
Q ss_pred CCCCcceeeeecccCceEEEEEEECCc-------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGSA-------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~-------~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
++++|++.+.||+|+||.||+|.+... .+++|... .. ........ +.+|+.++.+++||||+++++
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~--~~-~~~~~~~~----~~~ei~~l~~l~h~~i~~~~~ 75 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLK--EN-AEPKVQQE----FRQEAELMSDLQHPNIVCLLG 75 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecc--cC-CCHHHHHH----HHHHHHHHHhcCCcccceEEE
Confidence 356799999999999999999987432 36666533 21 12222233 478999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCC-----------CCCCHHHHHHHHHHHHHHHHHHH
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGE-----------KHVSVKLALFIAQDVAAALVELH 946 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~-----------~~ls~~~i~~Ia~qIa~gL~yLH 946 (1142)
++..... .+++|||+++++|.+++........ ..+++..+..++.||+.||.|||
T Consensus 76 ~~~~~~~--------------~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH 141 (283)
T cd05048 76 VCTKEQP--------------TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS 141 (283)
T ss_pred EEcCCCc--------------eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9876543 4999999999999999976322111 46889999999999999999999
Q ss_pred hCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001142 947 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1026 (1142)
Q Consensus 947 s~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1026 (1142)
++||+||||||+||+++.+ +.++|+|||++......... .......+++.|+|||.+.+ ..
T Consensus 142 ~~~i~H~dlkp~Nil~~~~-------~~~~L~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~ 202 (283)
T cd05048 142 SHHFVHRDLAARNCLVGEG-------LTVKISDFGLSRDIYSADYY--------RVQSKSLLPVRWMPPEAILY----GK 202 (283)
T ss_pred hCCeeccccccceEEEcCC-------CcEEECCCcceeeccccccc--------cccCCCcccccccCHHHhcc----Cc
Confidence 9999999999999999877 78999999998754321110 01123356888999999865 46
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHH
Q 001142 1027 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1105 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1105 (1142)
++.++|||||||++|||++ |..||.+....+....+.....+..+ ..+++.+
T Consensus 203 ~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~ 255 (283)
T cd05048 203 FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCP---------------------------EDCPARV 255 (283)
T ss_pred CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCc---------------------------ccCCHHH
Confidence 7899999999999999998 99999987777776666544332211 1456779
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHH
Q 001142 1106 VDVFRRCTEENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1106 ~dLI~~CL~~DP~~RPSa~EVL~~L~ 1131 (1142)
.+|+.+||+.||++||++.||++++.
T Consensus 256 ~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 256 YALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHh
Confidence 99999999999999999999999885
No 71
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3e-36 Score=344.74 Aligned_cols=249 Identities=24% Similarity=0.326 Sum_probs=198.2
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
++||+|+||.||+|++. +..+|+|+....... .....+. +..|.+++..+ +||||+++++++...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~----~~~e~~il~~~~~hp~i~~~~~~~~~~~------ 69 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL-QDDDVDC----TMTEKRILALAAKHPFLTALHCCFQTKD------ 69 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHHH----HHHHHHHHHhccCCCCccceeeEEEcCC------
Confidence 46999999999999985 457888886533211 1122222 36788888876 7999999999998655
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..|+||||+++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~E~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~---- 132 (321)
T cd05591 70 --------RLFFVMEYVNGGDLMFQIQR-----SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE---- 132 (321)
T ss_pred --------eEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC----
Confidence 34999999999999998875 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~el~tg~~P 195 (321)
T cd05591 133 ---GHCKLADFGMCKEGILNG----------VTTTTFCGTPDYIAPEILQE----LEYGPSVDWWALGVLMYEMMAGQPP 195 (321)
T ss_pred ---CCEEEeecccceecccCC----------ccccccccCccccCHHHHcC----CCCCCccceechhHHHHHHhcCCCC
Confidence 789999999986432211 01123468999999999875 5688999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-------C
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-------T 1122 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-------S 1122 (1142)
|...+..+....+....... + ...+..+.+++.+||+.||++|| +
T Consensus 196 f~~~~~~~~~~~i~~~~~~~-p---------------------------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~ 247 (321)
T cd05591 196 FEADNEDDLFESILHDDVLY-P---------------------------VWLSKEAVSILKAFMTKNPNKRLGCVASQGG 247 (321)
T ss_pred CCCCCHHHHHHHHHcCCCCC-C---------------------------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCC
Confidence 99887777776665432110 0 02345689999999999999999 9
Q ss_pred HHHHHHHHHhhc
Q 001142 1123 AGDLYEMFVART 1134 (1142)
Q Consensus 1123 a~EVL~~L~~~~ 1134 (1142)
+.++++|+|+..
T Consensus 248 ~~~~~~hp~~~~ 259 (321)
T cd05591 248 EDAIKQHPFFKE 259 (321)
T ss_pred HHHHhcCCccCC
Confidence 999999999864
No 72
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-36 Score=348.26 Aligned_cols=262 Identities=28% Similarity=0.360 Sum_probs=215.3
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~ 883 (1142)
..|++.+.||+|.||.||+|+. ++..+|+|+...+..... ...+.+ .+|+.+|+++. |||||.+++.|++..
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~-~~~~~v----~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGK-EDREDV----RREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcccc-ccHHHH----HHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 3589999999999999999998 466788888643332211 122333 79999999998 999999999999876
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++|||++.||.|.+.+... .+++..+..++.||+.|+.|||+.||+||||||+|+|+.
T Consensus 110 ~--------------~~lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~ 169 (382)
T KOG0032|consen 110 S--------------VYLVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLA 169 (382)
T ss_pred e--------------EEEEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeec
Confidence 4 49999999999999999872 399999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
... .+.+.+|++|||++....... .....+||+.|+|||++.. ..|+..+||||+||++|.|
T Consensus 170 ~~~---~~~~~ik~~DFGla~~~~~~~-----------~~~~~~Gtp~y~APEvl~~----~~y~~~~DiWS~Gvi~yiL 231 (382)
T KOG0032|consen 170 SKD---EGSGRIKLIDFGLAKFIKPGE-----------RLHTIVGTPEYVAPEVLGG----RPYGDEVDVWSIGVILYIL 231 (382)
T ss_pred ccc---CCCCcEEEeeCCCceEccCCc-----------eEeeecCCccccCchhhcC----CCCCcccchhHHHHHHHHH
Confidence 652 122579999999998765411 1235689999999999985 6799999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..||.+.+.......|..+....... .+ ..++..+.+++++|+..||.+|+|+
T Consensus 232 L~G~~PF~~~~~~~~~~~i~~~~~~f~~~-----------------------~w-~~is~~akd~i~~ll~~dp~~R~ta 287 (382)
T KOG0032|consen 232 LSGVPPFWGETEFEIFLAILRGDFDFTSE-----------------------PW-DDISESAKDFIRKLLEFDPRKRLTA 287 (382)
T ss_pred hhCCCCCcCCChhHHHHHHHcCCCCCCCC-----------------------Cc-cccCHHHHHHHHHhcccCcccCCCH
Confidence 99999999988877777776665421111 11 1557789999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.++++|||....
T Consensus 288 ~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 288 AQALQHPWIKSI 299 (382)
T ss_pred HHHhcCccccCC
Confidence 999999998864
No 73
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.7e-36 Score=347.28 Aligned_cols=250 Identities=25% Similarity=0.343 Sum_probs=197.9
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 890 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~ 890 (1142)
+.||+|+||.||+|.+ .+..+|+|+....... ...... .+..|++++..++||||+++++++...+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~-~~~~~~----~~~~e~~~l~~~~hp~i~~~~~~~~~~~------- 68 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVA----HTLTENRVLQNSRHPFLTALKYSFQTHD------- 68 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHH----HHHHHHHHHHhCCCCCCCceEEEEEcCC-------
Confidence 4799999999999987 4667888886533211 112222 2368999999999999999999987655
Q ss_pred CCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeeeccccccC
Q 001142 891 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 891 ~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|..++.. ...+++..+..++.||+.||.|||+ +||+||||||+|||++.+
T Consensus 69 -------~~~lv~E~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~---- 132 (325)
T cd05594 69 -------RLCFVMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD---- 132 (325)
T ss_pred -------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCC----
Confidence 34999999999999988865 3468999999999999999999997 799999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~tG~~P 195 (325)
T cd05594 133 ---GHIKITDFGLCKEGIKDGA----------TMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLP 195 (325)
T ss_pred ---CCEEEecCCCCeecCCCCc----------ccccccCCcccCCHHHHcc----CCCCCccccccccceeeeeccCCCC
Confidence 7899999999864321110 1123469999999999875 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAG 1124 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-----Sa~ 1124 (1142)
|.+....+....+..... .++ ...++.+.+++.+||+.||++|+ ++.
T Consensus 196 f~~~~~~~~~~~i~~~~~-~~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~ 247 (325)
T cd05594 196 FYNQDHEKLFELILMEEI-RFP---------------------------RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAK 247 (325)
T ss_pred CCCCCHHHHHHHHhcCCC-CCC---------------------------CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHH
Confidence 987766655555432221 100 13456789999999999999996 999
Q ss_pred HHHHHHHhhcC
Q 001142 1125 DLYEMFVARTS 1135 (1142)
Q Consensus 1125 EVL~~L~~~~s 1135 (1142)
++++|+|+...
T Consensus 248 ~il~h~~~~~~ 258 (325)
T cd05594 248 EIMQHKFFAGI 258 (325)
T ss_pred HHhcCCCcCCC
Confidence 99999998753
No 74
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=351.79 Aligned_cols=260 Identities=28% Similarity=0.456 Sum_probs=217.3
Q ss_pred CcceeeeecccCceEEEEEEECCcc--EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGSAD--AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~~~--vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
-|+|+..||.|+||.||+|....+. .|.|+ ++. ....+.++| +-||.||..+.||+||++++.|+.++.
T Consensus 33 ~WeIiGELGDGAFGKVyKA~nket~~lAAaKv--Iet--kseEELEDy----lVEIeILa~CdHP~ivkLl~ayy~enk- 103 (1187)
T KOG0579|consen 33 HWEIIGELGDGAFGKVYKAVNKETKLLAAAKV--IET--KSEEELEDY----LVEIEILAECDHPVIVKLLSAYYFENK- 103 (1187)
T ss_pred HHHHHhhhcCccchhhhhhhcccchhhhhhhh--hcc--cchhHHhhh----hhhhhhhhcCCChHHHHHHHHHhccCc-
Confidence 3689999999999999999876444 45555 332 244666677 789999999999999999998876554
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
+||+.|||.||-...++-.. ...+++.++..+++|++.||.|||+++|||||||+.|||++-+
T Consensus 104 -------------LwiliEFC~GGAVDaimlEL----~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld 166 (1187)
T KOG0579|consen 104 -------------LWILIEFCGGGAVDAIMLEL----GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD 166 (1187)
T ss_pred -------------eEEEEeecCCchHhHHHHHh----ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec
Confidence 49999999999999888763 4579999999999999999999999999999999999999988
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccc-cCCCCCCchhhHHHHHHHHHHHH
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAM-HKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
|.++|+|||.+...... ....+.+.|||+|||||+..+. ....+|+.++||||||++|.||.
T Consensus 167 -------GdirLADFGVSAKn~~t----------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMA 229 (1187)
T KOG0579|consen 167 -------GDIRLADFGVSAKNKST----------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMA 229 (1187)
T ss_pred -------CcEeeecccccccchhH----------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHh
Confidence 88999999998643321 1234577899999999998764 34568999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
.+.+|....+++.++-.|....+|.+... ...+..+.+|+.+||..||..||+++
T Consensus 230 qiEPPHhelnpMRVllKiaKSePPTLlqP-------------------------S~Ws~~F~DfLk~cL~Knp~~Rp~aa 284 (1187)
T KOG0579|consen 230 QIEPPHHELNPMRVLLKIAKSEPPTLLQP-------------------------SHWSRSFSDFLKRCLVKNPRNRPPAA 284 (1187)
T ss_pred ccCCCccccchHHHHHHHhhcCCCcccCc-------------------------chhhhHHHHHHHHHHhcCCccCCCHH
Confidence 99999999999888888877766654321 14556799999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001142 1125 DLYEMFVARTS 1135 (1142)
Q Consensus 1125 EVL~~L~~~~s 1135 (1142)
++++|+|+...
T Consensus 285 qll~Hpfv~~~ 295 (1187)
T KOG0579|consen 285 QLLKHPFVQNA 295 (1187)
T ss_pred HHhhCcccccC
Confidence 99999999844
No 75
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.1e-36 Score=353.64 Aligned_cols=267 Identities=22% Similarity=0.257 Sum_probs=200.9
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|+.. +..+|+|+...... ........+.+|+.++++++||||+++++.+.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~-----~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~- 74 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV-----LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD- 74 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH-----HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Confidence 36899999999999999999974 56788887532210 01111223478999999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+.++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~E~~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~ 136 (376)
T cd05598 75 -------------NLYFVMDYIPGGDMMSLLIR-----LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR 136 (376)
T ss_pred -------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC
Confidence 35999999999999999976 346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccc---------------------------------cCCCCCCCCccCCCc
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA---------------------------------HRGIPAPDVCVGTPR 1011 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~---------------------------------~~~~~~~~~~~GT~~ 1011 (1142)
+ +.+||+|||+|..+.......... ...........||+.
T Consensus 137 ~-------~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 209 (376)
T cd05598 137 D-------GHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPN 209 (376)
T ss_pred C-------CCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCcc
Confidence 7 789999999985332100000000 000001123479999
Q ss_pred ccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCC
Q 001142 1012 WMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGS 1090 (1142)
Q Consensus 1012 Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~ 1090 (1142)
|+|||++.+ ..++.++|||||||++|||++|+.||.+....+....+..... ...+
T Consensus 210 y~aPE~~~~----~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------- 266 (376)
T cd05598 210 YIAPEVLLR----TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIP------------------- 266 (376)
T ss_pred ccCHHHHcC----CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCC-------------------
Confidence 999999875 5678999999999999999999999988776655444432111 0000
Q ss_pred CCCCchhhhhhHHHHHHHHHHhcccCCCCCC---CHHHHHHHHHhhc
Q 001142 1091 GFEKPEAELETLSFLVDVFRRCTEENPTERP---TAGDLYEMFVART 1134 (1142)
Q Consensus 1091 ~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP---Sa~EVL~~L~~~~ 1134 (1142)
.....++.+.++|.+|+ .+|.+|+ ++.++++|+|+..
T Consensus 267 ------~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 267 ------SQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred ------CCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence 00134566888998876 5999999 9999999999875
No 76
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.2e-36 Score=354.50 Aligned_cols=279 Identities=23% Similarity=0.272 Sum_probs=213.4
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C-----CCccceeeeE
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H-----SCIVEMYGHK 879 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H-----pNIVkl~g~~ 879 (1142)
+|++.+.||+|+||.|-+|.+ ++..||+||++-+. .|..+...|+.+|..|+ | -|+|+++++|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---------~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---------RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---------HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 789999999999999999998 46778888865332 22233368999999996 5 3899999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
...+ |.|||+|.+. .+|+++++. +....++...++.|+.||+.||.+||+.||||+||||+|
T Consensus 258 ~fr~--------------HlciVfELL~-~NLYellK~---n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPEN 319 (586)
T KOG0667|consen 258 YFRN--------------HLCIVFELLS-TNLYELLKN---NKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPEN 319 (586)
T ss_pred cccc--------------ceeeeehhhh-hhHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhh
Confidence 8766 4599999996 899999987 445569999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||+....+ ..|||+|||.|........ ....+..|+|||++.+ .+|+.++||||||||
T Consensus 320 ILL~~~~r-----~~vKVIDFGSSc~~~q~vy-------------tYiQSRfYRAPEVILG----lpY~~~IDmWSLGCI 377 (586)
T KOG0667|consen 320 ILLKDPKR-----SRIKVIDFGSSCFESQRVY-------------TYIQSRFYRAPEVILG----LPYDTAIDMWSLGCI 377 (586)
T ss_pred eeeccCCc-----CceeEEecccccccCCcce-------------eeeeccccccchhhcc----CCCCCccceeehhhh
Confidence 99976533 6899999999976544221 3457889999999998 789999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccc---ccc--cccc-----c-----------------CCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---HEH--EVAQ-----S-----------------GSGF 1092 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---~~~--~~~~-----~-----------------~~~~ 1092 (1142)
++||.+|.+.|.+.++.+.+..|......+....++..... ... .... . ....
T Consensus 378 lAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 457 (586)
T KOG0667|consen 378 LAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLER 457 (586)
T ss_pred HHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccc
Confidence 99999999999999988877777443333333222221110 000 0000 0 0000
Q ss_pred CCc-h-------hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1093 EKP-E-------AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1093 ~~~-~-------~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
..+ . ........+.+++.+||.+||.+|+|+.|+++|+|+...
T Consensus 458 ~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~ 508 (586)
T KOG0667|consen 458 RGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT 508 (586)
T ss_pred cCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence 001 0 111345678999999999999999999999999999854
No 77
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=2.9e-36 Score=352.32 Aligned_cols=264 Identities=22% Similarity=0.309 Sum_probs=205.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||.||+|++. +..+|+|+...... ......+ .+.+|+.+++.++||||+++++++.+..
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~----~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM-IKRSDSA----FFWEERDIMAFANSPWVVQLFCAFQDDK 116 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhhHH----HHHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 467999999999999999999984 56678887542111 1111122 2368999999999999999999988655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++|+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 117 --------------~~~lv~Ey~~gg~L~~~l~~------~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~ 176 (370)
T cd05621 117 --------------YLYMVMEYMPGGDLVNLMSN------YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD 176 (370)
T ss_pred --------------EEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC
Confidence 35999999999999999865 3588999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+|........ .......||+.|+|||++.+......++.++|||||||++|+|
T Consensus 177 ~~-------~~~kL~DFG~a~~~~~~~~---------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyel 240 (370)
T cd05621 177 KH-------GHLKLADFGTCMKMDETGM---------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 240 (370)
T ss_pred CC-------CCEEEEecccceecccCCc---------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHH
Confidence 77 7899999999976532111 1112456999999999997643334578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--C
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE--R 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~--R 1120 (1142)
++|+.||.+.+.......+..... ..++. ....+..+.+++..||..++.+ |
T Consensus 241 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~~~~s~~~~~li~~~L~~~~~r~~R 295 (370)
T cd05621 241 LVGDTPFYADSLVGTYSKIMDHKNSLNFPE-------------------------DVEISKHAKNLICAFLTDREVRLGR 295 (370)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCcccCCCC-------------------------cccCCHHHHHHHHHHccCchhccCC
Confidence 999999988776666555543221 11110 0134567899999999865544 8
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
|++.|+++|+|++..
T Consensus 296 ~~~~e~l~hp~~~~~ 310 (370)
T cd05621 296 NGVEEIKQHPFFKND 310 (370)
T ss_pred CCHHHHhcCcccCCC
Confidence 999999999999864
No 78
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.7e-36 Score=342.64 Aligned_cols=249 Identities=27% Similarity=0.378 Sum_probs=194.2
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
++||+|+||.||+|++. +..+|+|+.+...... ....+. +..|..++..+ +||||+++++++....
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~----~~~e~~~l~~~~~hp~i~~~~~~~~~~~------ 69 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDVEC----TMVERRVLALAWEHPFLTHLFCTFQTKE------ 69 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHH----HHHHHHHHHhccCCCCccceeeEEEcCC------
Confidence 47999999999999984 4568888765332111 111222 24677777654 7999999999987654
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
+.++||||+++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~gg~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~---- 132 (316)
T cd05592 70 --------HLFFVMEYLNGGDLMFHIQS-----SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD---- 132 (316)
T ss_pred --------EEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCC----
Confidence 35999999999999999875 2468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 133 ---~~~kL~Dfg~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~ell~G~~P 195 (316)
T cd05592 133 ---GHIKIADFGMCKENMNGE----------GKASTFCGTPDYIAPEILKG----QKYNESVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred ---CCEEEccCcCCeECCCCC----------CccccccCCccccCHHHHcC----CCCCCcccchhHHHHHHHHHhCCCC
Confidence 789999999986532211 11224468999999999875 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH-HHHHH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA-GDLYE 1128 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa-~EVL~ 1128 (1142)
|.+.+..++...+.... +..+ ...+..+.+++.+||+.||.+||++ .++++
T Consensus 196 f~~~~~~~~~~~i~~~~-~~~~---------------------------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 196 FHGEDEDELFDSILNDR-PHFP---------------------------RWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCCCHHHHHHHHHcCC-CCCC---------------------------CCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 99877766666554322 1111 1345568899999999999999986 47889
Q ss_pred HHHhhc
Q 001142 1129 MFVART 1134 (1142)
Q Consensus 1129 ~L~~~~ 1134 (1142)
|+|+..
T Consensus 248 h~~~~~ 253 (316)
T cd05592 248 HPFFRG 253 (316)
T ss_pred CcccCC
Confidence 998864
No 79
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.4e-36 Score=342.88 Aligned_cols=250 Identities=25% Similarity=0.356 Sum_probs=195.8
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
++||+|+||.||+|++. +..+|+|+.+....... ..... ...|..++..+ +||||+++++++.+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-~~~~~----~~~e~~~l~~~~~~~~i~~~~~~~~~~~------ 69 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLID-DDVEC----TMVEKRVLALAWENPFLTHLYCTFQTKE------ 69 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhc-chHHH----HHHHHHHHHhccCCCCccCeeEEEEeCC------
Confidence 47999999999999984 56788887653321111 11122 25688888765 7999999999998655
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
+.|+||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~E~~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~---- 132 (316)
T cd05620 70 --------HLFFVMEFLNGGDLMFHIQD-----KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD---- 132 (316)
T ss_pred --------EEEEEECCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----
Confidence 45999999999999999875 2468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.++|+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~el~~g~~P 195 (316)
T cd05620 133 ---GHIKIADFGMCKENVFGD----------NRASTFCGTPDYIAPEILQG----LKYTFSVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred ---CCEEeCccCCCeecccCC----------CceeccCCCcCccCHHHHcC----CCCCcccchhhhHHHHHHHHhCCCC
Confidence 789999999986422111 11224568999999999876 5688999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH-HHHHH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA-GDLYE 1128 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa-~EVL~ 1128 (1142)
|.+.+..+....+..... ..+ ...+..+.+++.+||+.||.+||++ +++++
T Consensus 196 f~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 196 FHGDDEDELFESIRVDTP-HYP---------------------------RWITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred CCCCCHHHHHHHHHhCCC-CCC---------------------------CCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 988777666665543221 111 0234568999999999999999998 58888
Q ss_pred HHHhhcC
Q 001142 1129 MFVARTS 1135 (1142)
Q Consensus 1129 ~L~~~~s 1135 (1142)
|+|+...
T Consensus 248 h~~f~~~ 254 (316)
T cd05620 248 HPFFKTI 254 (316)
T ss_pred CCCcCCC
Confidence 9998653
No 80
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.3e-35 Score=344.68 Aligned_cols=285 Identities=18% Similarity=0.216 Sum_probs=201.9
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
...+|++.+.||+|+||.||+|.+ .+..+|+|+.... .........+ .+|+.+++.++||||+++++++...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~niv~~~~~~~~~ 92 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP--FQNQTHAKRA----YRELVLLKCVNHKNIISLLNVFTPQ 92 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccc--ccchhHHHHH----HHHHHHHHhCCCCCEeeeeeeeccC
Confidence 357899999999999999999987 4567888875322 1222222333 6899999999999999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
... ......|+||||++ ++|...+.. .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 93 ~~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~ 156 (359)
T cd07876 93 KSL--------EEFQDVYLVMELMD-ANLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 156 (359)
T ss_pred CCc--------cccceeEEEEeCCC-cCHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence 322 12235699999997 567776643 47889999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 157 ~~~-------~~~kl~Dfg~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwSlG~il~e 214 (359)
T cd07876 157 KSD-------CTLKILDFGLARTACTNF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGE 214 (359)
T ss_pred CCC-------CCEEEecCCCccccccCc-----------cCCCCcccCCCCCchhccC----CCCCcchhhHHHHHHHHH
Confidence 887 789999999986432211 1123468999999999876 568899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhc-----------ccccccccccCCCCCC---chhhhhhHHHHHH
Q 001142 1043 LLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALG-----------SCHEHEVAQSGSGFEK---PEAELETLSFLVD 1107 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~-----------~~~~~~~~~~~~~~~~---~~~~~~~~~~L~d 1107 (1142)
|++|+.||.+.+.......+ .....+... ...... ........+....+.. .......++.+.+
T Consensus 215 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (359)
T cd07876 215 LVKGSVIFQGTDHIDQWNKVIEQLGTPSAE-FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARD 293 (359)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHH
Confidence 99999999876654443333 222211111 000000 0000000000000000 0011123567899
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1108 VFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1108 LI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
|+.+||+.||++|||+.|+++|+|+..
T Consensus 294 li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 294 LLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred HHHHHhccCcccCCCHHHHhcCchhhh
Confidence 999999999999999999999999863
No 81
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.5e-35 Score=357.61 Aligned_cols=258 Identities=26% Similarity=0.367 Sum_probs=205.1
Q ss_pred CCcceeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~---~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..|.+.+.||+|++|.||+|... +..+++|..... ....... +.+|+.+++.++|||||++++++...+
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~----~~~~~~~----~~~E~~~l~~l~Hpniv~~~~~~~~~~ 138 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN----DERQAAY----ARSELHCLAACDHFGIVKHFDDFKSDD 138 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC----CHHHHHH----HHHHHHHHHhCCCCCEeEEEEEEEECC
Confidence 34999999999999999999874 345666643221 2222222 368999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
+.+|||||+++|+|.++++.... ...++++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 139 --------------~~~lv~E~~~gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~ 203 (478)
T PTZ00267 139 --------------KLLLIMEYGSGGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM 203 (478)
T ss_pred --------------EEEEEEECCCCCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC
Confidence 45999999999999999875322 235689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+++.+...... .......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 204 ~~-------~~~kL~DFgla~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~~l~el 264 (478)
T PTZ00267 204 PT-------GIIKLGDFGFSKQYSDSVSL--------DVASSFCGTPYYLAPELWER----KRYSKKADMWSLGVILYEL 264 (478)
T ss_pred CC-------CcEEEEeCcCceecCCcccc--------ccccccCCCccccCHhHhCC----CCCCcHHhHHHHHHHHHHH
Confidence 77 78999999999765432110 11224469999999999875 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||.+....++...+..+..+..+. ..+..+.++|.+||+.||++||++
T Consensus 265 ~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~s~~~~~li~~~L~~dP~~Rps~ 317 (478)
T PTZ00267 265 LTLHRPFKGPSQREIMQQVLYGKYDPFPC---------------------------PVSSGMKALLDPLLSKNPALRPTT 317 (478)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCCc---------------------------cCCHHHHHHHHHHhccChhhCcCH
Confidence 99999998877766666655443322110 344568999999999999999999
Q ss_pred HHHHHHHHhh
Q 001142 1124 GDLYEMFVAR 1133 (1142)
Q Consensus 1124 ~EVL~~L~~~ 1133 (1142)
.+++.+.|.+
T Consensus 318 ~~~l~~~~~~ 327 (478)
T PTZ00267 318 QQLLHTEFLK 327 (478)
T ss_pred HHHHhCHHHH
Confidence 9999988765
No 82
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=7.6e-36 Score=346.03 Aligned_cols=261 Identities=21% Similarity=0.300 Sum_probs=198.3
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
...+.+|++.++||+|+||.||+|++. +..+|+|+..... .... ...+.+|++++++++|+||+++++++.
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~ 142 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDTV----RRQICREIEILRDVNHPNVVKCHDMFD 142 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHHH----HHHHHHHHHHHHhCCCCCcceeeeEec
Confidence 344678999999999999999999984 6778888753221 1122 233479999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+ ..++||||+++++|.+. ...++..+..++.||+.||+|||++||+||||||+||
T Consensus 143 ~~~--------------~~~lv~e~~~~~~L~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI 199 (353)
T PLN00034 143 HNG--------------EIQVLLEFMDGGSLEGT---------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNL 199 (353)
T ss_pred cCC--------------eEEEEEecCCCCccccc---------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHE
Confidence 654 34999999999998643 2356778889999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGvi 1039 (1142)
|++.+ +.+||+|||++..+..... ......||..|+|||++.... .+..++.++|||||||+
T Consensus 200 ll~~~-------~~~kL~DfG~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvi 262 (353)
T PLN00034 200 LINSA-------KNVKIADFGVSRILAQTMD----------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVS 262 (353)
T ss_pred EEcCC-------CCEEEcccccceecccccc----------cccccccCccccCccccccccccCcCCCcchhHHHHHHH
Confidence 99887 7899999999876533211 112346899999999875422 12334579999999999
Q ss_pred HHHHHhCCCCCCCCCHHHH---HHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1040 LLELLTLQVPYMGLSELEI---HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el---~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
+|||++|+.||......+. ...+.....+. .....+..+.+||.+||+.|
T Consensus 263 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~~l~~~ 315 (353)
T PLN00034 263 ILEFYLGRFPFGVGRQGDWASLMCAICMSQPPE---------------------------APATASREFRHFISCCLQRE 315 (353)
T ss_pred HHHHHhCCCCCCCCCCccHHHHHHHHhccCCCC---------------------------CCCccCHHHHHHHHHHccCC
Confidence 9999999999974322221 11111111111 01144567999999999999
Q ss_pred CCCCCCHHHHHHHHHhhcCCC
Q 001142 1117 PTERPTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~~ss~ 1137 (1142)
|++|||+.|+++|+|+.....
T Consensus 316 P~~Rpt~~ell~hp~~~~~~~ 336 (353)
T PLN00034 316 PAKRWSAMQLLQHPFILRAQP 336 (353)
T ss_pred hhhCcCHHHHhcCcccccCCc
Confidence 999999999999999987643
No 83
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.1e-35 Score=344.49 Aligned_cols=286 Identities=17% Similarity=0.221 Sum_probs=202.5
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
..++|++.+.||+|+||.||+|.+. +..+|+|+.. ...........+ .+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~~----~~E~~~l~~l~h~niv~~~~~~~~~ 88 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS--RPFQNQTHAKRA----YRELVLMKCVNHKNIISLLNVFTPQ 88 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeC--CcccChHHHHHH----HHHHHHHHHhCCCchhceeeeeecc
Confidence 3578999999999999999999874 5667777643 222222222333 6899999999999999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
... ......++||||++ ++|...+.. .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 89 ~~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill 152 (355)
T cd07874 89 KSL--------EEFQDVYLVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152 (355)
T ss_pred ccc--------cccceeEEEhhhhc-ccHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE
Confidence 322 12235699999997 577777653 47889999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 153 ~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwslG~il~e 210 (355)
T cd07874 153 KSD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGE 210 (355)
T ss_pred CCC-------CCEEEeeCcccccCCCcc-----------ccCCccccCCccCHHHHcC----CCCCchhhHHHHHHHHHH
Confidence 887 789999999997543211 1123468999999999875 568899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcc-----------cccccccccCCC--CC-CchhhhhhHHHHHHH
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGS-----------CHEHEVAQSGSG--FE-KPEAELETLSFLVDV 1108 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~-----------~~~~~~~~~~~~--~~-~~~~~~~~~~~L~dL 1108 (1142)
|++|+.||.+.+..+....+........+........ ............ +. ........+..+.+|
T Consensus 211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (355)
T cd07874 211 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 290 (355)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHH
Confidence 9999999987765554433322111111111000000 000000000000 00 000111235678999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
+.+||+.||++|||+.|+++|+|+..
T Consensus 291 i~~mL~~dP~~Rps~~ell~hp~~~~ 316 (355)
T cd07874 291 LSKMLVIDPAKRISVDEALQHPYINV 316 (355)
T ss_pred HHHHhcCCchhcCCHHHHhcCcchhc
Confidence 99999999999999999999999963
No 84
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2e-35 Score=343.85 Aligned_cols=286 Identities=17% Similarity=0.206 Sum_probs=205.2
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
...+|++.+.||+|+||.||+|.+. +..+|+|+.... .........+ .+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~ii~~~~~~~~~ 95 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP--FQNQTHAKRA----YRELVLMKCVNHKNIIGLLNVFTPQ 95 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcc--ccCchhHHHH----HHHHHHHHhcCCCCccccceeeccc
Confidence 3578999999999999999999874 566777765322 2222222333 6899999999999999999988654
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
... ......|+||||++ ++|.+.+.. .+++..+..++.|++.||+|||++||+||||||+|||+
T Consensus 96 ~~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll 159 (364)
T cd07875 96 KSL--------EEFQDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159 (364)
T ss_pred ccc--------cccCeEEEEEeCCC-CCHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE
Confidence 322 12235699999997 678877753 47889999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 160 ~~~-------~~~kL~DfG~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwSlG~il~e 217 (364)
T cd07875 160 KSD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGE 217 (364)
T ss_pred CCC-------CcEEEEeCCCccccCCCC-----------cccCCcccCCcCCHHHHhC----CCCCchhhHHhHHHHHHH
Confidence 887 789999999997543211 1123468999999999876 568899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccc-----------ccccccccCCCCC---CchhhhhhHHHHHHH
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-----------HEHEVAQSGSGFE---KPEAELETLSFLVDV 1108 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-----------~~~~~~~~~~~~~---~~~~~~~~~~~L~dL 1108 (1142)
|++|+.||.+.+..+....+........+......... ......+...... ...........++++
T Consensus 218 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 297 (364)
T cd07875 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297 (364)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHH
Confidence 99999999987776655555332222222111111000 0000000000000 000011234578999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
|.+||+.||.+|||+.|+++|+|+..
T Consensus 298 l~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 298 LSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred HHHhcCcCcccCCCHHHHhcCccccc
Confidence 99999999999999999999999963
No 85
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=9.3e-36 Score=347.75 Aligned_cols=286 Identities=20% Similarity=0.240 Sum_probs=205.3
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.++||+|+||.||+|.+ .+..+|+|... .........+. +.+|+.+++.++||||+++++++......
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMP--NVFQNLVSCKR----VFRELKMLCFFKHDNVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEecc--ccccchHHHHH----HHHHHHHHHhCCCCCcCCHhheecCCCcc
Confidence 478899999999999999997 46677777642 22222222333 37899999999999999999998764311
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.....|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 75 ---------~~~~~~lv~e~~~-~~l~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~ 139 (372)
T cd07853 75 ---------PFEEIYVVTELMQ-SDLHKIIVS-----PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN 139 (372)
T ss_pred ---------ccceEEEEeeccc-cCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCC
Confidence 1225699999996 788887754 3468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||+++....... .......+|+.|+|||++.+ ...++.++|||||||++|||++
T Consensus 140 -------~~~kL~Dfg~a~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il~el~~ 200 (372)
T cd07853 140 -------CVLKICDFGLARVEEPDES---------KHMTQEVVTQYYRAPEILMG---SRHYTSAVDIWSVGCIFAELLG 200 (372)
T ss_pred -------CCEEeccccceeecccCcc---------ccCCCCCcCCCcCCHHHHcC---CCCCCcHHHHHhHHHHHHHHHc
Confidence 7899999999975432111 01123357899999999875 2357899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccccCCCCCC-c---hhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1046 LQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEK-P---EAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+.||.+.+..+....+... ..+.. ..+.................... . ......++.+.+|+.+||+.||.+|
T Consensus 201 g~~pf~~~~~~~~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 279 (372)
T cd07853 201 RRILFQAQSPIQQLDLITDLLGTPSL-EAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKR 279 (372)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCCH-HHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhC
Confidence 99999987776666555332 22221 11111000000000000000000 0 0011346678999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001142 1121 PTAGDLYEMFVART 1134 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ 1134 (1142)
||+.|+++|+|+..
T Consensus 280 ~t~~e~l~hp~~~~ 293 (372)
T cd07853 280 ISAADALAHPYLDE 293 (372)
T ss_pred cCHHHHhcCHhhCC
Confidence 99999999999876
No 86
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.7e-36 Score=344.25 Aligned_cols=249 Identities=26% Similarity=0.317 Sum_probs=194.7
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHhhCCCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.||+|+||+||+|++ .+..+|+|+........ ..... .+..|.. +++.++||||+++++.+.+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~----~~~~e~~~~~~~l~hp~iv~~~~~~~~~~------ 69 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK-KKEQK----HIMAERNVLLKNVKHPFLVGLHYSFQTAD------ 69 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHH----HHHHHHHHHHhhCCCCCCCCeeEEEEeCC------
Confidence 4799999999999998 46778888864321111 11111 2245554 457789999999999987654
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~---- 132 (323)
T cd05575 70 --------KLYFVLDYVNGGELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ---- 132 (323)
T ss_pred --------EEEEEEcCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC----
Confidence 34999999999999999875 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~ell~g~~p 195 (323)
T cd05575 133 ---GHVVLTDFGLCKEGIEHS----------KTTSTFCGTPEYLAPEVLRK----QPYDRTVDWWCLGAVLYEMLYGLPP 195 (323)
T ss_pred ---CcEEEeccCCCcccccCC----------CccccccCChhhcChhhhcC----CCCCccccccccchhhhhhhcCCCC
Confidence 789999999986432111 11123468999999999875 5688999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH----HH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA----GD 1125 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa----~E 1125 (1142)
|.+.+..+....+...... +. ...+..+.+++.+||+.||.+||++ .+
T Consensus 196 f~~~~~~~~~~~i~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (323)
T cd05575 196 FYSRDTAEMYDNILNKPLR-LK---------------------------PNISVSARHLLEGLLQKDRTKRLGAKDDFLE 247 (323)
T ss_pred CCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHH
Confidence 9887776666655433211 00 0345668999999999999999987 69
Q ss_pred HHHHHHhhc
Q 001142 1126 LYEMFVART 1134 (1142)
Q Consensus 1126 VL~~L~~~~ 1134 (1142)
+++|+|+..
T Consensus 248 il~~~~~~~ 256 (323)
T cd05575 248 IKNHVFFSS 256 (323)
T ss_pred HHcCCCcCC
Confidence 999999864
No 87
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.3e-36 Score=342.36 Aligned_cols=254 Identities=25% Similarity=0.326 Sum_probs=200.9
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~ 884 (1142)
+|++.+.||+|+||.||+|++. +..+|+|+....... .....+ ....|..++..+ +|++|+++++++.+.+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~----~~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVE----CTMVEKRVLALSGKPPFLTQLHSCFQTMD- 74 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHH----HHHHHHHHHHhccCCCeEeeEEEEEecCC-
Confidence 5889999999999999999884 457888876532211 111122 225788888777 5899999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~ 136 (323)
T cd05616 75 -------------RLYFVMEYVNGGDLMYQIQQ-----VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS 136 (323)
T ss_pred -------------EEEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC
Confidence 34999999999999999875 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 137 ~-------~~~kL~DfG~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~ell 195 (323)
T cd05616 137 E-------GHIKIADFGMCKENMWDG----------VTTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVLLYEML 195 (323)
T ss_pred C-------CcEEEccCCCceecCCCC----------CccccCCCChhhcCHHHhcC----CCCCCccchhchhHHHHHHH
Confidence 7 789999999986432111 01123468999999999876 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC--
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT-- 1122 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS-- 1122 (1142)
+|+.||.+.+..++...+...... .+ ...+..+.+++.+||+.||.+|++
T Consensus 196 tg~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05616 196 AGQAPFEGEDEDELFQSIMEHNVA-YP---------------------------KSMSKEAVAICKGLMTKHPGKRLGCG 247 (323)
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------CcCCHHHHHHHHHHcccCHHhcCCCC
Confidence 999999987777766665443211 00 034556899999999999999998
Q ss_pred ---HHHHHHHHHhhc
Q 001142 1123 ---AGDLYEMFVART 1134 (1142)
Q Consensus 1123 ---a~EVL~~L~~~~ 1134 (1142)
..++++|+|++.
T Consensus 248 ~~~~~~i~~h~~~~~ 262 (323)
T cd05616 248 PEGERDIKEHAFFRY 262 (323)
T ss_pred CCCHHHHhcCCCcCC
Confidence 489999988864
No 88
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.3e-35 Score=323.55 Aligned_cols=253 Identities=24% Similarity=0.330 Sum_probs=203.5
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|++|.||+|.+ .+..+++|..... .......+.+ .+|++++++++||||+++++++.+.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~-- 72 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLS--KMNRREREEA----IDEARVLAKLDSSYIIRYYESFLDKG-- 72 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehh--hCCHHHHHHH----HHHHHHHHhcCCCCeehheeeeccCC--
Confidence 578999999999999999988 4566777765433 2223333344 78999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++... ....+++..+..++.|++.||.|||+.||+|+||||+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~ 137 (256)
T cd08529 73 ------------KLNIVMEYAENGDLHKLLKMQ---RGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAY 137 (256)
T ss_pred ------------EEEEEEEeCCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCC
Confidence 359999999999999999762 23468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+........ ......|++.|+|||++.+ ..++.++||||||+++|+|++
T Consensus 138 -------~~~~l~df~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~~ 196 (256)
T cd08529 138 -------DNVKIGDLGVAKLLSDNTN----------FANTIVGTPYYLSPELCED----KPYNEKSDVWALGVVLYECCT 196 (256)
T ss_pred -------CCEEEcccccceeccCccc----------hhhccccCccccCHHHhcC----CCCCCccchHHHHHHHHHHHh
Confidence 7899999999876543211 1123357889999999875 457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||......+....+..+..+.... ..+..+.+++.+||+.+|++||++.+
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~i~~~l~~~p~~Rp~~~~ 249 (256)
T cd08529 197 GKHPFDANNQGALILKIIRGVFPPVSQ---------------------------MYSQQLAQLIDQCLTKDYRQRPDTFQ 249 (256)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCcc---------------------------ccCHHHHHHHHHHccCCcccCcCHHH
Confidence 999998777665555554443332221 34456899999999999999999999
Q ss_pred HHHHHH
Q 001142 1126 LYEMFV 1131 (1142)
Q Consensus 1126 VL~~L~ 1131 (1142)
+++++|
T Consensus 250 ll~~~~ 255 (256)
T cd08529 250 LLRNPS 255 (256)
T ss_pred HhhCCC
Confidence 999876
No 89
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-35 Score=340.10 Aligned_cols=280 Identities=23% Similarity=0.310 Sum_probs=201.8
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||.||+|.+. +..+|+|+..... ....... +.+|++++++++||||+++++++.+.+
T Consensus 5 ~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~- 76 (333)
T cd06650 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQ----IIRELQVLHECNSPYIVGFYGAFYSDG- 76 (333)
T ss_pred hhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHH----HHHHHHHHHHCCCCcccceeEEEEECC-
Confidence 57999999999999999999985 5566777654331 2222233 379999999999999999999998755
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeeec
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENILID 963 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDLKp~NILld 963 (1142)
+.++||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++
T Consensus 77 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~ 138 (333)
T cd06650 77 -------------EISICMEHMDGGSLDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN 138 (333)
T ss_pred -------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc
Confidence 34999999999999999975 24588999999999999999999975 799999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++....... .....||..|+|||++.+ ..++.++|||||||++|+|
T Consensus 139 ~~-------~~~kL~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~il~~l 195 (333)
T cd06650 139 SR-------GEIKLCDFGVSGQLIDSM------------ANSFVGTRSYMSPERLQG----THYSVQSDIWSMGLSLVEM 195 (333)
T ss_pred CC-------CCEEEeeCCcchhhhhhc------------cccCCCCccccCHHHhcC----CCCCcHHHHHHHHHHHHHH
Confidence 77 789999999986543211 123458999999999875 4678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhh-cccccccc----ccc-------------CCCCCCchhhhhhHHHH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL-GSCHEHEV----AQS-------------GSGFEKPEAELETLSFL 1105 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~-~~~~~~~~----~~~-------------~~~~~~~~~~~~~~~~L 1105 (1142)
++|+.||......+....+............... ........ ... .............+.++
T Consensus 196 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (333)
T cd06650 196 AIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEF 275 (333)
T ss_pred HHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHH
Confidence 9999999865544433222110000000000000 00000000 000 00000000001245678
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1106 VDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1106 ~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
.+|+.+||+.||++|||+.|+++|+|++..
T Consensus 276 ~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 276 QDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred HHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 999999999999999999999999999865
No 90
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2e-35 Score=334.45 Aligned_cols=265 Identities=20% Similarity=0.286 Sum_probs=196.0
Q ss_pred CCcceeeeecccCceEEEEEEECC------------------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS------------------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR 868 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~------------------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~ 868 (1142)
.+|++.++||+|+||.||+|.+.. ..+|+|+.... ........+ .+|+.++.+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~----~~E~~~l~~l~ 77 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD---ANKNARNDF----LKEVKILSRLK 77 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC---CCHHHHHHH----HHHHHHHhhcC
Confidence 478999999999999999998632 24777765422 122233334 79999999999
Q ss_pred CCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc--------------CCCCCCHHHHHHH
Q 001142 869 HSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--------------GEKHVSVKLALFI 934 (1142)
Q Consensus 869 HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~--------------~~~~ls~~~i~~I 934 (1142)
||||+++++++.+.+. .++||||+++++|.+++...... ....+++..+..+
T Consensus 78 h~niv~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 143 (304)
T cd05096 78 DPNIIRLLGVCVDEDP--------------LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHV 143 (304)
T ss_pred CCCeeEEEEEEecCCc--------------eEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHH
Confidence 9999999999986543 49999999999999998653211 1134688899999
Q ss_pred HHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccc
Q 001142 935 AQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMA 1014 (1142)
Q Consensus 935 a~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 1014 (1142)
+.||+.||.|||++||+||||||+|||++.+ +.+||+|||+++........ .......++..|+|
T Consensus 144 ~~~i~~al~~lH~~~ivH~dlkp~Nill~~~-------~~~kl~DfG~~~~~~~~~~~--------~~~~~~~~~~~y~a 208 (304)
T cd05096 144 ALQIASGMKYLSSLNFVHRDLATRNCLVGEN-------LTIKIADFGMSRNLYAGDYY--------RIQGRAVLPIRWMA 208 (304)
T ss_pred HHHHHHHHHHHHHCCccccCcchhheEEcCC-------ccEEECCCccceecccCcee--------EecCcCCCCccccC
Confidence 9999999999999999999999999999887 78999999999754322110 01123346788999
Q ss_pred hhhhccccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCC
Q 001142 1015 PEVLRAMHKPNLYGLEVDIWSYGCLLLELLT--LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGF 1092 (1142)
Q Consensus 1015 PE~l~~~~~~~~~s~ksDVwSLGviL~ELLt--G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~ 1092 (1142)
||++.. ..++.++||||||+++|||++ +..||.+.+..+....+...........
T Consensus 209 PE~~~~----~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------- 265 (304)
T cd05096 209 WECILM----GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQV------------------- 265 (304)
T ss_pred HHHHhc----CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccc-------------------
Confidence 999875 568899999999999999987 5678877665554433321100000000
Q ss_pred CCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 001142 1093 EKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1093 ~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~ 1131 (1142)
.......++..+.+++.+||+.||.+|||+.+|.+.+.
T Consensus 266 -~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 266 -YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred -cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 00000144567999999999999999999999987653
No 91
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.6e-36 Score=350.25 Aligned_cols=267 Identities=23% Similarity=0.275 Sum_probs=200.4
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|++.++||+|+||+||+|++. +..+|+|+..... .........+.+|+.++++++|||||++++.+.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~-- 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKD-----VLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-- 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC--
Confidence 5899999999999999999984 5567777653221 111112233478999999999999999999998655
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
+.++||||+++|+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 75 ------------~~~lv~E~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~ 137 (382)
T cd05625 75 ------------NLYFVMDYIPGGDMMSLLIR-----MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 137 (382)
T ss_pred ------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 34999999999999999875 2468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCccccccccccccc-------------------------------------ccCCCCCCCCccC
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCI-------------------------------------AHRGIPAPDVCVG 1008 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~-------------------------------------~~~~~~~~~~~~G 1008 (1142)
+.+||+|||++..+......... ............|
T Consensus 138 -------g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 210 (382)
T cd05625 138 -------GHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVG 210 (382)
T ss_pred -------CCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccc
Confidence 78999999998543211000000 0000001123469
Q ss_pred CCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhcccccccccc
Q 001142 1009 TPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQ 1087 (1142)
Q Consensus 1009 T~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~ 1087 (1142)
|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+....+.... ....+.
T Consensus 211 t~~Y~aPE~~~~----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--------------- 271 (382)
T cd05625 211 TPNYIAPEVLLR----TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPP--------------- 271 (382)
T ss_pred CcccCCHHHhcC----CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCC---------------
Confidence 999999999875 568899999999999999999999998877665544443211 111100
Q ss_pred cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC---HHHHHHHHHhhcC
Q 001142 1088 SGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT---AGDLYEMFVARTS 1135 (1142)
Q Consensus 1088 ~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS---a~EVL~~L~~~~s 1135 (1142)
....++++.++|.+|+ .+|.+|++ +.++++|+|++..
T Consensus 272 ----------~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~ 311 (382)
T cd05625 272 ----------QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTI 311 (382)
T ss_pred ----------cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCc
Confidence 0134566888888876 59999987 9999999999753
No 92
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-36 Score=346.70 Aligned_cols=264 Identities=28% Similarity=0.390 Sum_probs=196.8
Q ss_pred CCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
++|.-..+||+|+||.||+|...+ ..+|||. +....... .++| .+|+.++.+++|||||+++|||.+.+.
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~--~~~~~~~~--~~eF----~~Ei~~ls~l~H~Nlv~LlGyC~e~~~- 145 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKR--LSSNSGQG--EREF----LNEVEILSRLRHPNLVKLLGYCLEGGE- 145 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCCCEEEEEE--ecCCCCcc--hhHH----HHHHHHHhcCCCcCcccEEEEEecCCc-
Confidence 457777899999999999999865 6788884 33322221 3345 899999999999999999999987541
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCCCCeee
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---HIMHRDIKSENILI 962 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~---gIvHrDLKp~NILl 962 (1142)
+.+||+||+++|||.+++... ... +++|..+.+||.++|+||+|||.. .||||||||+|||+
T Consensus 146 ------------~~~LVYEym~nGsL~d~L~~~--~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL 210 (361)
T KOG1187|consen 146 ------------HRLLVYEYMPNGSLEDHLHGK--KGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL 210 (361)
T ss_pred ------------eEEEEEEccCCCCHHHHhCCC--CCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE
Confidence 359999999999999999751 111 789999999999999999999975 49999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccc-cccccccccCCCCCCCCc-cCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRS-FLHTCCIAHRGIPAPDVC-VGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~-~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|.+ +++||+|||+|+.... .... ... .||..|+|||+... ...+.|+|||||||++
T Consensus 211 D~~-------~~aKlsDFGLa~~~~~~~~~~-----------~~~~~gt~gY~~PEy~~~----g~lt~KsDVySFGVvl 268 (361)
T KOG1187|consen 211 DED-------FNAKLSDFGLAKLGPEGDTSV-----------STTVMGTFGYLAPEYAST----GKLTEKSDVYSFGVVL 268 (361)
T ss_pred CCC-------CCEEccCccCcccCCccccce-----------eeecCCCCccCChhhhcc----CCcCcccccccchHHH
Confidence 988 8999999999965432 1110 111 69999999999875 5678999999999999
Q ss_pred HHHHhCCCCCCCCC---HHHHHHH----HHhCCCCCchhHHhhhcccccccccccCCC-CCCchhhhhhHHHHHHHHHHh
Q 001142 1041 LELLTLQVPYMGLS---ELEIHDL----IQMGKRPRLTDELEALGSCHEHEVAQSGSG-FEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~---~~el~~~----I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
+||+||+.|..... ...+... +..+. +.. +.++... ...+ .......+..+..+|
T Consensus 269 lElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~---~~e------------iiD~~l~~~~~~--~~~~~~~~~~~a~~C 331 (361)
T KOG1187|consen 269 LELITGRKAVDQSRPRGELSLVEWAKPLLEEGK---LRE------------IVDPRLKEGEYP--DEKEVKKLAELALRC 331 (361)
T ss_pred HHHHhCCcccCCCCCcccccHHHHHHHHHHCcc---hhh------------eeCCCccCCCCC--hHHHHHHHHHHHHHH
Confidence 99999998876432 1111221 11111 110 1111100 0011 003455688899999
Q ss_pred cccCCCCCCCHHHHHHHHHhh
Q 001142 1113 TEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1113 L~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
++.+|.+||+|.||++++...
T Consensus 332 ~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 332 LRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred cCcCCCcCcCHHHHHHHHHhh
Confidence 999999999999999988443
No 93
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.4e-36 Score=340.71 Aligned_cols=250 Identities=26% Similarity=0.350 Sum_probs=195.7
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.||+|+||.||+|++. +..+|+|+.+....... .... ....|..++..+ +||||+++++++.+.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~----~~~~e~~~l~~~~~hp~iv~~~~~~~~~~------ 69 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMD-DDVE----CTMVEKRVLSLAWEHPFLTHLYCTFQTKE------ 69 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhc-chHH----HHHHHHHHHHhccCCCcCcceEEEEEeCC------
Confidence 47999999999999985 45688887653321111 1112 225688888765 8999999999988655
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~ey~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~---- 132 (316)
T cd05619 70 --------NLFFVMEYLNGGDLMFHIQS-----CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD---- 132 (316)
T ss_pred --------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC----
Confidence 34999999999999999875 2468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~el~~G~~p 195 (316)
T cd05619 133 ---GHIKIADFGMCKENMLGD----------AKTCTFCGTPDYIAPEILLG----QKYNTSVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred ---CCEEEccCCcceECCCCC----------CceeeecCCccccCHHHHcC----CCCCchhhhhhHHHHHHHHHhCCCC
Confidence 789999999986432111 01123468999999999875 5688999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG-DLYE 1128 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~-EVL~ 1128 (1142)
|.+.+..+....+..... ..+ ...+..+.+++.+||+.||.+||++. ++++
T Consensus 196 f~~~~~~~~~~~i~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 196 FHGHDEEELFQSIRMDNP-CYP---------------------------RWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CCCCCHHHHHHHHHhCCC-CCC---------------------------ccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 988777666665543221 111 02345689999999999999999996 8999
Q ss_pred HHHhhcC
Q 001142 1129 MFVARTS 1135 (1142)
Q Consensus 1129 ~L~~~~s 1135 (1142)
|+|+...
T Consensus 248 h~~~~~~ 254 (316)
T cd05619 248 HPFFREI 254 (316)
T ss_pred CcccCCC
Confidence 9998653
No 94
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.4e-35 Score=326.27 Aligned_cols=254 Identities=20% Similarity=0.308 Sum_probs=197.5
Q ss_pred CCCcceeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
..+|++.+.||+|+||.||+|.+. +..+|+|+.+ ... .......+ .+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~--~~~-~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~ 76 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLR--AGC-SDKQRRGF----LAEALTLGQFDHSNIVRLEGVIT 76 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecC--CCC-CHHHHHHH----HHHHHHHhcCCCCCcCeEEEEEe
Confidence 456899999999999999999863 3355666543 221 12222333 78999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
..+. .++||||+++++|.+++... ...+++..++.++.||+.||+|||++|++||||||+||
T Consensus 77 ~~~~--------------~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~ni 138 (266)
T cd05064 77 RGNT--------------MMIVTEYMSNGALDSFLRKH----EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKV 138 (266)
T ss_pred cCCC--------------cEEEEEeCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhE
Confidence 6543 49999999999999998751 24689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.++++|||.+........ .......++..|+|||.+.+ ..++.++|||||||++
T Consensus 139 li~~~-------~~~~l~dfg~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l 198 (266)
T cd05064 139 LVNSD-------LVCKISGFRRLQEDKSEAI---------YTTMSGKSPVLWAAPEAIQY----HHFSSASDVWSFGIVM 198 (266)
T ss_pred EEcCC-------CcEEECCCcccccccccch---------hcccCCCCceeecCHHHHhh----CCccchhHHHHHHHHH
Confidence 99877 7899999998754321110 01112235678999999875 5688999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
||+++ |..||.+....+....+..+..+..+ ..++..+.+++.+||+.+|.+
T Consensus 199 ~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~c~~~~p~~ 251 (266)
T cd05064 199 WEVMSYGERPYWDMSGQDVIKAVEDGFRLPAP---------------------------RNCPNLLHQLMLDCWQKERGE 251 (266)
T ss_pred HHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC---------------------------CCCCHHHHHHHHHHcCCCchh
Confidence 99775 99999887776666665444322111 134567999999999999999
Q ss_pred CCCHHHHHHHHH
Q 001142 1120 RPTAGDLYEMFV 1131 (1142)
Q Consensus 1120 RPSa~EVL~~L~ 1131 (1142)
||++.+|++.+.
T Consensus 252 RP~~~~i~~~l~ 263 (266)
T cd05064 252 RPRFSQIHSILS 263 (266)
T ss_pred CCCHHHHHHHHH
Confidence 999999998753
No 95
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.5e-36 Score=345.09 Aligned_cols=263 Identities=23% Similarity=0.290 Sum_probs=205.1
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||+||+|++ .+..+|+|+.+.... ...... ..+.+|+.+++.++||||+++++++.+.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~----~~~~~e~~i~~~~~~~~i~~~~~~~~~~~- 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL-LAQETV----SFFEEERDILSISNSPWIPQLQYAFQDKD- 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHH----HHHHHHHHHHHhCCCCCCcceeeEEecCC-
Confidence 3689999999999999999987 466788887653321 011122 23478999999999999999999887654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~ 137 (330)
T cd05601 75 -------------NLYLVMEYQPGGDLLSLLNRY----EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR 137 (330)
T ss_pred -------------eEEEEECCCCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC
Confidence 349999999999999999762 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccC--CCCCCchhhHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK--PNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~~~~s~ksDVwSLGviL~E 1042 (1142)
+ +.+||+|||++..+...... ......||+.|+|||++..... ...++.++|||||||++|+
T Consensus 138 ~-------~~~kL~Dfg~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~e 201 (330)
T cd05601 138 T-------GHIKLADFGSAARLTANKMV---------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYE 201 (330)
T ss_pred C-------CCEEeccCCCCeECCCCCce---------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeee
Confidence 7 78999999999765432111 1123468999999999864221 2457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++|+.||...........+..... ...+. ....+..+.+|+..||+ +|.+||
T Consensus 202 l~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~~~~~~~~li~~ll~-~p~~R~ 255 (330)
T cd05601 202 MIYGRSPFHEGTSAKTYNNIMNFQRFLKFPE-------------------------DPKVSSDFLDLIQSLLC-GQKERL 255 (330)
T ss_pred eccCCCCCCCCCHHHHHHHHHcCCCccCCCC-------------------------CCCCCHHHHHHHHHHcc-ChhhCC
Confidence 9999999987766655555433211 00000 01345678999999998 999999
Q ss_pred CHHHHHHHHHhhc
Q 001142 1122 TAGDLYEMFVART 1134 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ 1134 (1142)
|+.++++|+|+..
T Consensus 256 t~~~l~~h~~~~~ 268 (330)
T cd05601 256 GYEGLCCHPFFSK 268 (330)
T ss_pred CHHHHhCCCCcCC
Confidence 9999999999875
No 96
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.5e-35 Score=331.86 Aligned_cols=282 Identities=22% Similarity=0.226 Sum_probs=198.4
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEecC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKISS 882 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkl~g~~~~~ 882 (1142)
+|++.+.||+|+||+||+|.+. +..+|+|+.+........ ... +.+|+.+++.+ .||||+++++++...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~--~~~----~~~e~~~l~~l~~~~h~ni~~~~~~~~~~ 74 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL--PLS----TVREVALLKRLEAFDHPNIVRLMDVCATS 74 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC--chH----HHHHHHHHHHhhhcCCCCeeeeeeeeccc
Confidence 4889999999999999999984 566888875543221111 111 24566666655 699999999988653
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
.. ......++||||++ ++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 75 ~~---------~~~~~~~lv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili 141 (288)
T cd07863 75 RT---------DRETKVTLVFEHVD-QDLRTYLDKV---PPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV 141 (288)
T ss_pred cC---------CCCceEEEEEcccc-cCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 21 11235699999997 6899988752 23458999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 142 ~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~DiwslG~~l~~ 199 (288)
T cd07863 142 TSG-------GQVKLADFGLARIYSCQM-----------ALTPVVVTLWYRAPEVLLQ----STYATPVDMWSVGCIFAE 199 (288)
T ss_pred CCC-------CCEEECccCccccccCcc-----------cCCCccccccccCchHhhC----CCCCCcchhhhHHHHHHH
Confidence 877 789999999987543211 1123458899999999875 568899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++|++||.+....+....+... ..+. ...+..........+ ...............+..+.+++.+||+.||++||
T Consensus 200 l~~g~~~f~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 277 (288)
T cd07863 200 MFRRKPLFCGNSEADQLGKIFDLIGLPP-EDDWPRDVTLPRGAF-SPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRI 277 (288)
T ss_pred HHhCCcCcCCCCHHHHHHHHHHHhCCCC-hhhCccccccccccc-CCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCC
Confidence 99999999876665544443221 1111 001000000000000 00000000111124566789999999999999999
Q ss_pred CHHHHHHHHHh
Q 001142 1122 TAGDLYEMFVA 1132 (1142)
Q Consensus 1122 Sa~EVL~~L~~ 1132 (1142)
|+.|++.|+||
T Consensus 278 t~~~~l~hp~f 288 (288)
T cd07863 278 SAFRALQHPFF 288 (288)
T ss_pred CHHHHhcCCCC
Confidence 99999999986
No 97
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.2e-35 Score=333.72 Aligned_cols=284 Identities=18% Similarity=0.232 Sum_probs=206.6
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+..+++|++.++||+|+||.||+|++. +..+|+|......... . ... +.+|+.++++++||||+++++++.
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~--~-~~~----~~~E~~~l~~l~h~nI~~~~~~~~ 74 (301)
T cd07873 2 FGKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG--A-PCT----AIREVSLLKDLKHANIVTLHDIIH 74 (301)
T ss_pred CccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC--c-hhH----HHHHHHHHHhcCCCCcceEEEEEe
Confidence 456788999999999999999999874 5667777754332111 1 112 268999999999999999999988
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
... ..++||||++ ++|.+++... ...+++..+..++.||+.||.|||++||+|+||||+||
T Consensus 75 ~~~--------------~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Ni 135 (301)
T cd07873 75 TEK--------------SLTLVFEYLD-KDLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNL 135 (301)
T ss_pred cCC--------------eEEEEEeccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHE
Confidence 654 3499999997 6998888652 24588999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.++|+|||++........ ......+++.|+|||++.+ ...++.++|||||||++
T Consensus 136 l~~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~---~~~~~~~~Dv~slG~~l 195 (301)
T cd07873 136 LINER-------GELKLADFGLARAKSIPTK----------TYSNEVVTLWYRPPDILLG---STDYSTQIDMWGVGCIF 195 (301)
T ss_pred EECCC-------CcEEECcCcchhccCCCCC----------cccccceeecccCcHHHhC---CCCCccHHHHHHHHHHH
Confidence 99887 7899999999865432111 1112357889999999865 24577899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccC-CCCC---CchhhhhhHHHHHHHHHHhcccC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSG-SGFE---KPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
|+|++|+.||.+.+..+....+...........+..... ...+.... .... ........++.+.+||.+||+.|
T Consensus 196 ~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d 273 (301)
T cd07873 196 YEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILS--NEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFE 273 (301)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhc--cccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCC
Confidence 999999999988776555444432221111111111000 00000000 0000 00111245677899999999999
Q ss_pred CCCCCCHHHHHHHHHhhc
Q 001142 1117 PTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~~ 1134 (1142)
|.+|||+.|+++|+|++.
T Consensus 274 p~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 274 GRKRISAEEAMKHPYFHC 291 (301)
T ss_pred cccCcCHHHHhcCccccc
Confidence 999999999999999974
No 98
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4e-35 Score=345.17 Aligned_cols=276 Identities=23% Similarity=0.279 Sum_probs=196.6
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.++||+|+||.||+|.+. +..+|+|.. . ...+ .+|++++++++|||||++++++....
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~--~--------~~~~----~~E~~il~~l~HpnIv~~~~~~~~~~ 156 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAG--Q--------RGGT----ATEAHILRAINHPSIIQLKGTFTYNK 156 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEech--h--------hhhh----HHHHHHHHhCCCCCCCCEeEEEEECC
Confidence 457999999999999999999984 455666642 1 1122 68999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++|||++. ++|..++.. ...+++..++.|+.||+.||.|||++||+||||||+|||++
T Consensus 157 ~--------------~~lv~e~~~-~~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~ 216 (391)
T PHA03212 157 F--------------TCLILPRYK-TDLYCYLAA-----KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN 216 (391)
T ss_pred e--------------eEEEEecCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc
Confidence 3 499999996 789888865 24689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+|......... ......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 217 ~~-------~~vkL~DFG~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~el 276 (391)
T PHA03212 217 HP-------GDVCLGDFGAACFPVDINAN---------KYYGWAGTIATNAPELLAR----DPYGPAVDIWSAGIVLFEM 276 (391)
T ss_pred CC-------CCEEEEeCCccccccccccc---------ccccccCccCCCChhhhcC----CCCCcHHHHHHHHHHHHHH
Confidence 77 78999999998643221100 1123469999999999875 5688999999999999999
Q ss_pred HhCCCCCCCCC--------HHHHHHHHHh-CCCCC-chhHH-hhhcccccccccc-cCCCCCCc--hhhhhhHHHHHHHH
Q 001142 1044 LTLQVPYMGLS--------ELEIHDLIQM-GKRPR-LTDEL-EALGSCHEHEVAQ-SGSGFEKP--EAELETLSFLVDVF 1109 (1142)
Q Consensus 1044 LtG~~Pf~~~~--------~~el~~~I~~-~~~p~-l~~~l-~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~L~dLI 1109 (1142)
++|+.||.... ...+...+.. +..+. .+... ............. .......+ ......+.++.+|+
T Consensus 277 ltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li 356 (391)
T PHA03212 277 ATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLI 356 (391)
T ss_pred HHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHH
Confidence 99998875321 1122222221 11111 00000 0000000000000 00000011 11124567899999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1110 RRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1110 ~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
.+||+.||.+||||.|+++|+|++.-
T Consensus 357 ~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 357 CKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred HHHhcCChhhCCCHHHHhcChhhccC
Confidence 99999999999999999999999764
No 99
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.4e-35 Score=342.07 Aligned_cols=285 Identities=18% Similarity=0.226 Sum_probs=202.7
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||+||+|.+. +..+|+|+.... .......+ .+.+|+.++++++||||+++++++.....
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07878 15 ERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRP--FQSLIHAR----RTYRELRLLKHMKHENVIGLLDVFTPATS 88 (343)
T ss_pred hhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCch--hhhhHHHH----HHHHHHHHHHhcCCCchhhhhhhhccccc
Confidence 57999999999999999999874 456777764321 11112222 23689999999999999999998864321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ......+++||++ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 89 ~--------~~~~~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~ 153 (343)
T cd07878 89 I--------ENFNEVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNE 153 (343)
T ss_pred c--------cccCcEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECC
Confidence 1 1233569999998 6899888753 36899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++...... .....||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 154 ~-------~~~kl~Dfg~~~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el~ 210 (343)
T cd07878 154 D-------CELRILDFGLARQADDE-------------MTGYVATRWYRAPEIMLN---WMHYNQTVDIWSVGCIMAELL 210 (343)
T ss_pred C-------CCEEEcCCccceecCCC-------------cCCccccccccCchHhcC---CccCCchhhhHhHHHHHHHHH
Confidence 7 78999999999754321 113468999999999865 235789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCch---hhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE---AELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||.+....+....+.................................. ......+.+.+|+.+||+.||.+||
T Consensus 211 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~ 290 (343)
T cd07878 211 KGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRI 290 (343)
T ss_pred HCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCC
Confidence 9999998766555444442221111111111110000000000000000000 0012345688999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++|+|+...
T Consensus 291 s~~ell~hp~~~~~ 304 (343)
T cd07878 291 SASEALAHPYFSQY 304 (343)
T ss_pred CHHHHhcCcchhcc
Confidence 99999999999753
No 100
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.1e-35 Score=347.38 Aligned_cols=265 Identities=21% Similarity=0.292 Sum_probs=204.8
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
...+|++.+.||+|+||.||+|++. +..+|+|+...... ...... ..+.+|+.+++.++||||+++++.+.+.
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~----~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDS----AFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh-hhhHHH----HHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 3578999999999999999999984 55677777532111 011111 2236899999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ..++||||+++|+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 116 ~--------------~~~lv~Ey~~gg~L~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll 175 (371)
T cd05622 116 R--------------YLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 175 (371)
T ss_pred C--------------EEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE
Confidence 4 35999999999999999875 358899999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||++........ .......||+.|+|||++........++.++|||||||++||
T Consensus 176 ~~~-------~~ikL~DfG~a~~~~~~~~---------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilye 239 (371)
T cd05622 176 DKS-------GHLKLADFGTCMKMNKEGM---------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 239 (371)
T ss_pred CCC-------CCEEEEeCCceeEcCcCCc---------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHH
Confidence 877 7899999999976532111 112245699999999998764333457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE-- 1119 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~-- 1119 (1142)
|++|+.||.+.+.......+..... ...+. ....+..+.++|..||..++.+
T Consensus 240 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~~s~~~~~li~~~L~~~~~r~~ 294 (371)
T cd05622 240 MLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-------------------------DNDISKEAKNLICAFLTDREVRLG 294 (371)
T ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCcccCCC-------------------------cCCCCHHHHHHHHHHcCChhhhcC
Confidence 9999999998777666666543221 11110 0145667899999999844433
Q ss_pred CCCHHHHHHHHHhhcC
Q 001142 1120 RPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~s 1135 (1142)
||+++++++|+|+...
T Consensus 295 r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 295 RNGVEEIKRHLFFKND 310 (371)
T ss_pred CCCHHHHhcCcccCCC
Confidence 7899999999999764
No 101
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.5e-35 Score=332.15 Aligned_cols=256 Identities=21% Similarity=0.272 Sum_probs=193.7
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 815 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 815 LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
||+|+||+||++.+. +..+|+|........ ..... ..+..|+.++++++||||+++++++....
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~----~~~~~E~~il~~l~~~~i~~~~~~~~~~~--------- 66 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-KRKGY----EGAMVEKRILAKVHSRFIVSLAYAFQTKT--------- 66 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh-hhHHH----HHHHHHHHHHHhCCCCcEeeeeEEEcCCC---------
Confidence 799999999999874 566788775322110 11111 23368999999999999999999887654
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 972 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~ 972 (1142)
+.++||||+++++|..++..... ....+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 67 -----~~~lv~e~~~~g~L~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~------- 133 (280)
T cd05608 67 -----DLCLVMTIMNGGDLRYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDND------- 133 (280)
T ss_pred -----eEEEEEeCCCCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC-------
Confidence 35999999999999988865322 23568999999999999999999999999999999999999876
Q ss_pred CeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001142 973 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1052 (1142)
Q Consensus 973 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~ 1052 (1142)
+.++|+|||++..+..... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 134 ~~~~l~dfg~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~----~~~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 134 GNVRISDLGLAVELKDGQS----------KTKGYAGTPGFMAPELLQG----EEYDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred CCEEEeeCccceecCCCCc----------cccccCCCcCccCHHHhcC----CCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 7899999999875433211 1123468999999999876 5678999999999999999999999975
Q ss_pred CCHHHHHHHHHh-CCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHHHH
Q 001142 1053 LSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAGDL 1126 (1142)
Q Consensus 1053 ~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-----Sa~EV 1126 (1142)
.........+.. ...... ......+..+.+++.+||+.||++|| +++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~ 254 (280)
T cd05608 200 RGEKVENKELKQRILNDSV-------------------------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGL 254 (280)
T ss_pred CCcchhHHHHHHhhcccCC-------------------------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHH
Confidence 432211111111 000000 00014566799999999999999999 88999
Q ss_pred HHHHHhhcCC
Q 001142 1127 YEMFVARTSS 1136 (1142)
Q Consensus 1127 L~~L~~~~ss 1136 (1142)
++|+|+....
T Consensus 255 l~h~~~~~~~ 264 (280)
T cd05608 255 RTHPLFRDLN 264 (280)
T ss_pred hcChhhhcCC
Confidence 9999997643
No 102
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.3e-35 Score=339.08 Aligned_cols=250 Identities=26% Similarity=0.333 Sum_probs=197.6
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.||+|+||+||+|.+. +..+|+|+.+..... ....... +.+|+.++..+ +||||+++++++...+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~----~~~e~~il~~~~~h~~i~~~~~~~~~~~------ 69 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL-QDDDVEC----TMTEKRVLALAGKHPFLTQLHSCFQTKD------ 69 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHH----HHHHHHHHHhccCCCCccceeeEEEcCC------
Confidence 47999999999999984 557888876532111 1112222 36788899888 6999999999987654
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
+.++||||+++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~---- 132 (318)
T cd05570 70 --------RLFFVMEYVNGGDLMFHIQR-----SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE---- 132 (318)
T ss_pred --------EEEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC----
Confidence 35999999999999998876 2468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~----------~~~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslGvil~~l~~G~~p 195 (318)
T cd05570 133 ---GHIKIADFGMCKEGILGG----------VTTSTFCGTPDYIAPEILSY----QPYGPAVDWWALGVLLYEMLAGQSP 195 (318)
T ss_pred ---CcEEecccCCCeecCcCC----------CcccceecCccccCHHHhcC----CCCCcchhhhhHHHHHHHHhhCCCC
Confidence 789999999986422111 01123458999999999876 5688999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH-----H
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA-----G 1124 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa-----~ 1124 (1142)
|.+.+..+....+..... ..+ ...++.+.+++.+||+.||.+||++ .
T Consensus 196 f~~~~~~~~~~~i~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~ 247 (318)
T cd05570 196 FEGDDEDELFQSILEDEV-RYP---------------------------RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQ 247 (318)
T ss_pred CCCCCHHHHHHHHHcCCC-CCC---------------------------CcCCHHHHHHHHHHccCCHHHcCCCCCCCHH
Confidence 988776666555533221 100 0345568999999999999999999 9
Q ss_pred HHHHHHHhhcC
Q 001142 1125 DLYEMFVARTS 1135 (1142)
Q Consensus 1125 EVL~~L~~~~s 1135 (1142)
++++|+|+...
T Consensus 248 ~ll~~~~~~~~ 258 (318)
T cd05570 248 DIKGHPFFREI 258 (318)
T ss_pred HHhcCCCcCCC
Confidence 99999998653
No 103
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8.6e-36 Score=346.52 Aligned_cols=268 Identities=20% Similarity=0.231 Sum_probs=203.5
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|+.. +..+|+|+...... ........+.+|+.++..++||||+++++.+.+.+
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM-----LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR- 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH-----hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-
Confidence 46899999999999999999884 56788887642211 11112233478999999999999999999988655
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+.++||||+++|+|.+++.. ...+++..+..++.|++.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~ 136 (360)
T cd05627 75 -------------NLYLIMEFLPGGDMMTLLMK-----KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA 136 (360)
T ss_pred -------------EEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC
Confidence 34999999999999999875 346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccc-------------------------cCCCCCCCCccCCCcccchhhhc
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-------------------------HRGIPAPDVCVGTPRWMAPEVLR 1019 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-------------------------~~~~~~~~~~~GT~~Y~APE~l~ 1019 (1142)
+ +.++|+|||++..+.......... ..........+||+.|+|||++.
T Consensus 137 ~-------~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 209 (360)
T cd05627 137 K-------GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM 209 (360)
T ss_pred C-------CCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc
Confidence 7 789999999987543211000000 00000111346999999999987
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhh
Q 001142 1020 AMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1098 (1142)
Q Consensus 1020 ~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1142)
+ ..++.++|||||||++|||++|+.||.+....+....+..... ...+. .
T Consensus 210 ~----~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~ 260 (360)
T cd05627 210 Q----TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPP-------------------------E 260 (360)
T ss_pred C----CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCC-------------------------C
Confidence 6 5688999999999999999999999988777666655543211 10000 0
Q ss_pred hhhHHHHHHHHHHhcccCCCCCC---CHHHHHHHHHhhcC
Q 001142 1099 LETLSFLVDVFRRCTEENPTERP---TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1099 ~~~~~~L~dLI~~CL~~DP~~RP---Sa~EVL~~L~~~~s 1135 (1142)
...++.+.++|.+|+. ||.+|+ +++++++|+|+...
T Consensus 261 ~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~ 299 (360)
T cd05627 261 VPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGV 299 (360)
T ss_pred CCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCC
Confidence 1245568899998774 999998 58999999998764
No 104
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.4e-36 Score=343.61 Aligned_cols=248 Identities=24% Similarity=0.292 Sum_probs=197.4
Q ss_pred eeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~-----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
+.||+|+||.||+++. .+..+|+|+...... ..... .++.+|++++++++||||+++++++.+.+
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 71 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--KVRDR----VRTKMERDILAEVNHPFIVKLHYAFQTEG---- 71 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh--hhhhH----HHHHHHHHHHHhCCCCCcccEEEEEEcCC----
Confidence 6799999999999875 457788888653211 11111 23368999999999999999999988654
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
..|+||||+++++|.+++.+ ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 72 ----------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-- 134 (318)
T cd05582 72 ----------KLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE-- 134 (318)
T ss_pred ----------EEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCC--
Confidence 34999999999999999865 3468999999999999999999999999999999999999877
Q ss_pred cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1047 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~ 1047 (1142)
+.+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 135 -----~~~kL~Dfg~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslG~il~el~tg~ 195 (318)
T cd05582 135 -----GHIKLTDFGLSKESIDHEK----------KAYSFCGTVEYMAPEVVNR----RGHTQSADWWSFGVLMFEMLTGS 195 (318)
T ss_pred -----CcEEEeeccCCcccCCCCC----------ceecccCChhhcCHHHHcC----CCCCCccceeccceEeeeeccCC
Confidence 7899999999865432110 1123468999999999875 45789999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC-----
Q 001142 1048 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT----- 1122 (1142)
Q Consensus 1048 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS----- 1122 (1142)
.||......+....+...... ++ ...++.+.+++.+||+.||.+||+
T Consensus 196 ~p~~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~l~~~P~~R~~a~~~~ 247 (318)
T cd05582 196 LPFQGKDRKETMTMILKAKLG-MP---------------------------QFLSPEAQSLLRALFKRNPANRLGAGPDG 247 (318)
T ss_pred CCCCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHhHcCCCCCCC
Confidence 999887766666555432211 00 034566899999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001142 1123 AGDLYEMFVART 1134 (1142)
Q Consensus 1123 a~EVL~~L~~~~ 1134 (1142)
+.+++.|+|+..
T Consensus 248 ~~~~~~~~~~~~ 259 (318)
T cd05582 248 VEEIKRHPFFST 259 (318)
T ss_pred HHHHhCCCCcCC
Confidence 777999988754
No 105
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-36 Score=347.77 Aligned_cols=256 Identities=27% Similarity=0.450 Sum_probs=206.6
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
-+||+|+||+||-|++..+.|.++|+.+...... .. .-+..||.+.++|+|.|||+++|.+-+.+++
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr--~~----QPLhEEIaLH~~LrHkNIVrYLGs~senGf~------- 647 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSR--EV----QPLHEEIALHSTLRHKNIVRYLGSVSENGFF------- 647 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccch--hh----ccHHHHHHHHHHHhhHhHHHHhhccCCCCeE-------
Confidence 4799999999999999988888888877654322 12 2336899999999999999999998766544
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 972 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~ 972 (1142)
-|.||-+|||||.++++. +.+...-.+..+-.+.+||+.||.|||++.|||||||-+||||+.-.
T Consensus 648 -------kIFMEqVPGGSLSsLLrs--kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTyS------ 712 (1226)
T KOG4279|consen 648 -------KIFMEQVPGGSLSSLLRS--KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYS------ 712 (1226)
T ss_pred -------EEEeecCCCCcHHHHHHh--ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeecc------
Confidence 899999999999999986 34433348889999999999999999999999999999999997543
Q ss_pred CeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001142 973 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1052 (1142)
Q Consensus 973 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~ 1052 (1142)
|.+||+|||-++.+.... +-..++.||..|||||++... ...|+.++|||||||++.||+||++||..
T Consensus 713 GvlKISDFGTsKRLAgin----------P~TETFTGTLQYMAPEvIDqG--~RGYG~aADIWS~GCT~vEMATGrPPF~E 780 (1226)
T KOG4279|consen 713 GVLKISDFGTSKRLAGIN----------PCTETFTGTLQYMAPEVIDQG--PRGYGKAADIWSFGCTMVEMATGRPPFVE 780 (1226)
T ss_pred ceEEecccccchhhccCC----------ccccccccchhhhChHhhccC--CcCCCchhhhhhccceeEeeccCCCCeee
Confidence 899999999998765432 223467799999999999863 46799999999999999999999999976
Q ss_pred CCHHH-HHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 001142 1053 LSELE-IHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF 1130 (1142)
Q Consensus 1053 ~~~~e-l~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L 1130 (1142)
....+ ..-.+ .....|+++ .+.+.+.+.+|.+|+.+||.+||+|.++|+.+
T Consensus 781 lgspqAAMFkVGmyKvHP~iP---------------------------eelsaeak~FilrcFepd~~~R~sA~~LL~Dp 833 (1226)
T KOG4279|consen 781 LGSPQAAMFKVGMYKVHPPIP---------------------------EELSAEAKNFILRCFEPDPCDRPSAKDLLQDP 833 (1226)
T ss_pred cCChhHhhhhhcceecCCCCc---------------------------HHHHHHHHHHHHHHcCCCcccCccHHHhccCc
Confidence 43332 11111 111222222 36677899999999999999999999999999
Q ss_pred HhhcC
Q 001142 1131 VARTS 1135 (1142)
Q Consensus 1131 ~~~~s 1135 (1142)
|.+..
T Consensus 834 Flq~~ 838 (1226)
T KOG4279|consen 834 FLQHN 838 (1226)
T ss_pred ccccC
Confidence 98866
No 106
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=9.5e-36 Score=341.18 Aligned_cols=249 Identities=24% Similarity=0.305 Sum_probs=192.7
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHhhCCCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.||+|+||+||+|++. +..+|+|+...+.... ...... +..|.. +++.++||||+++++++.+.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~----~~~e~~~~l~~~~h~~Iv~~~~~~~~~~------ 69 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK-KKEEKH----IMSERNVLLKNVKHPFLVGLHFSFQTAD------ 69 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh-hhHHHH----HHHHHHHHHHhCCCCCCCceeEEEEcCC------
Confidence 47999999999999984 4568888764321111 111112 234444 567789999999999988655
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~---- 132 (325)
T cd05602 70 --------KLYFVLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ---- 132 (325)
T ss_pred --------eEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----
Confidence 34999999999999999875 3468889999999999999999999999999999999999877
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kl~DfG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~p 195 (325)
T cd05602 133 ---GHIVLTDFGLCKENIEHN----------GTTSTFCGTPEYLAPEVLHK----QPYDRTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred ---CCEEEccCCCCcccccCC----------CCcccccCCccccCHHHHcC----CCCCCccccccccHHHHHHhcCCCC
Confidence 789999999986432211 01224469999999999876 5688999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH----H
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG----D 1125 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~----E 1125 (1142)
|.+.+..+....+....... ....+..+.+++.+||+.||.+||++. +
T Consensus 196 f~~~~~~~~~~~i~~~~~~~----------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 196 FYSRNTAEMYDNILNKPLQL----------------------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred CCCCCHHHHHHHHHhCCcCC----------------------------CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 98877766665554321100 013456789999999999999999875 8
Q ss_pred HHHHHHhhc
Q 001142 1126 LYEMFVART 1134 (1142)
Q Consensus 1126 VL~~L~~~~ 1134 (1142)
+++|+|+..
T Consensus 248 i~~~~~~~~ 256 (325)
T cd05602 248 IKNHIFFSP 256 (325)
T ss_pred HhcCcccCC
Confidence 888888753
No 107
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.4e-35 Score=333.08 Aligned_cols=260 Identities=22% Similarity=0.291 Sum_probs=199.8
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|++.++||+|+||.||++.+. +..+|+|+...... .... ....+.+|+.++++++||||+++++++.+.+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 73 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRK---GEAMALNEKQILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhh--hhhh---hHHHHHHHHHHHHhcCCCCEeeeeeeecCCC--
Confidence 4789999999999999999974 56788887542211 1111 1223368999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
+.++||||+++++|.+++.. .....+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus 74 ------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~ 138 (285)
T cd05605 74 ------------ALCLVLTLMNGGDLKFHIYN---MGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDY 138 (285)
T ss_pred ------------eEEEEEeccCCCcHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCC
Confidence 35999999999999988865 223468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++....... ......|++.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 139 -------~~~~l~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Diws~G~~l~el~~ 196 (285)
T cd05605 139 -------GHIRISDLGLAVEIPEGE-----------TIRGRVGTVGYMAPEVVKN----ERYTFSPDWWGLGCLIYEMIE 196 (285)
T ss_pred -------CCEEEeeCCCceecCCCC-----------ccccccCCCCccCcHHhcC----CCCCccccchhHHHHHHHHHH
Confidence 789999999987543211 0113368999999999875 567899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC----
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP---- 1121 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP---- 1121 (1142)
|+.||.+.........+........ .......+..+.+|+.+||+.||++||
T Consensus 197 g~~pf~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 252 (285)
T cd05605 197 GKSPFRQRKEKVKREEVERRVKEDQ------------------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRG 252 (285)
T ss_pred CCCCCCCCchhhHHHHHHHHhhhcc------------------------cccCcccCHHHHHHHHHHccCCHHHhcCCCC
Confidence 9999987554332222211100000 000013456789999999999999999
Q ss_pred -CHHHHHHHHHhhcC
Q 001142 1122 -TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 -Sa~EVL~~L~~~~s 1135 (1142)
+++++++|+|+...
T Consensus 253 ~~~~~l~~~~~~~~~ 267 (285)
T cd05605 253 EGAEEVKAHPFFRTA 267 (285)
T ss_pred CCHHHHhcCcCccCC
Confidence 99999999999754
No 108
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=5.5e-35 Score=321.94 Aligned_cols=251 Identities=25% Similarity=0.379 Sum_probs=198.0
Q ss_pred CCCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..+|++.+.||+|+||.||++.+.. ..+++|... .... ...++ .+|+.++++++||||+++++++.....
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~--~~~~---~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~ 73 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAIN--EGAM---SEEDF----IEEAKVMMKLSHPKLVQLYGVCTQQKP 73 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEeccCceEEEEecc--cCCc---cHHHH----HHHHHHHHHCCCCCceeEEEEEccCCC
Confidence 3568999999999999999999854 467777643 2111 12234 689999999999999999999876543
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 74 --------------~~iv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~ 135 (256)
T cd05114 74 --------------LYIVTEFMENGCLLNYLRQR----QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS 135 (256)
T ss_pred --------------EEEEEEcCCCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC
Confidence 49999999999999998751 235899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||.++........ ......++..|+|||++.+ ..++.++||||||+++|+|+
T Consensus 136 ~-------~~~kl~d~g~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~s~G~~l~el~ 195 (256)
T cd05114 136 T-------GVVKVSDFGMTRYVLDDEYT---------SSSGAKFPVKWSPPEVFNF----SKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred C-------CeEEECCCCCccccCCCcee---------ccCCCCCchhhCChhhccc----CccchhhhhHHHHHHHHHHH
Confidence 7 78999999998754321111 1112235668999999865 46789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |+.||...+..+....+..+..+..+. ..+..+.+++.+||+.+|.+||++
T Consensus 196 ~~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~~~~li~~c~~~~p~~Rps~ 248 (256)
T cd05114 196 TEGKMPFEKKSNYEVVEMISRGFRLYRPK---------------------------LASMTVYEVMYSCWHEKPEGRPTF 248 (256)
T ss_pred cCCCCCCCCCCHHHHHHHHHCCCCCCCCC---------------------------CCCHHHHHHHHHHccCCcccCcCH
Confidence 9 899998877766666665543322110 234568999999999999999999
Q ss_pred HHHHHHH
Q 001142 1124 GDLYEMF 1130 (1142)
Q Consensus 1124 ~EVL~~L 1130 (1142)
.++++.+
T Consensus 249 ~~l~~~l 255 (256)
T cd05114 249 AELLRAI 255 (256)
T ss_pred HHHHHhh
Confidence 9999865
No 109
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.1e-35 Score=336.96 Aligned_cols=255 Identities=24% Similarity=0.322 Sum_probs=200.4
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~ 884 (1142)
+|++.+.||+|+||.||+|.+. +..+|+|+....... .....+. +..|+.++..+. |++|+++++++.+.+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~----~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVEC----TMVEKRVLALQDKPPFLTQLHSCFQTVD- 74 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHH----HHHHHHHHHhccCCCchhheeeEEecCC-
Confidence 4788999999999999999874 567888876532111 1112222 367888888885 678888998887654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..|+||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~Ey~~~g~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~ 136 (323)
T cd05615 75 -------------RLYFVMEYVNGGDLMYHIQQ-----VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS 136 (323)
T ss_pred -------------EEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC
Confidence 34999999999999999875 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 137 ~-------~~ikL~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~ell 195 (323)
T cd05615 137 E-------GHIKIADFGMCKEHMVDG----------VTTRTFCGTPDYIAPEIIAY----QPYGKSVDWWAYGVLLYEML 195 (323)
T ss_pred C-------CCEEEeccccccccCCCC----------ccccCccCCccccCHHHHcC----CCCCCccchhhhHHHHHHHH
Confidence 7 789999999986432211 01123458999999999875 56789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC--
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT-- 1122 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS-- 1122 (1142)
+|+.||.+.........+...... .+ ...+..+.+++.+||+.||.+|++
T Consensus 196 tG~~pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 196 AGQPPFDGEDEDELFQSIMEHNVS-YP---------------------------KSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------ccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 999999987776666665433211 00 033456899999999999999997
Q ss_pred ---HHHHHHHHHhhcC
Q 001142 1123 ---AGDLYEMFVARTS 1135 (1142)
Q Consensus 1123 ---a~EVL~~L~~~~s 1135 (1142)
..++.+|+|+...
T Consensus 248 ~~~~~~i~~h~~f~~~ 263 (323)
T cd05615 248 PEGERDIREHAFFRRI 263 (323)
T ss_pred CCCHHHHhcCcccCCC
Confidence 5789999998754
No 110
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=8.7e-36 Score=341.49 Aligned_cols=249 Identities=25% Similarity=0.296 Sum_probs=194.2
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHhhCCCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.||+|+||.||+|++ .+..+|+|+...+.... ...... +..|.. +++.++||||+++++++...+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~~----~~~e~~~~l~~~~hp~iv~~~~~~~~~~------ 69 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN-RKEQKH----IMAERNVLLKNVKHPFLVGLHYSFQTTE------ 69 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHHH----HHHHHHHHHHhCCCCCCccEEEEEecCC------
Confidence 4799999999999987 46678888865332111 111122 245554 467789999999999988655
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~---- 132 (325)
T cd05604 70 --------KLYFVLDFVNGGELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ---- 132 (325)
T ss_pred --------EEEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC----
Confidence 34999999999999988865 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~DfG~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~el~~G~~p 195 (325)
T cd05604 133 ---GHVVLTDFGLCKEGIAQS----------DTTTTFCGTPEYLAPEVIRK----QPYDNTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred ---CCEEEeecCCcccCCCCC----------CCcccccCChhhCCHHHHcC----CCCCCcCccccccceehhhhcCCCC
Confidence 789999999986432111 11124468999999999876 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH----HH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA----GD 1125 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa----~E 1125 (1142)
|...+..++...+........ ...+..+.+++.+||+.||.+||++ .+
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 196 FYCRDVAEMYDNILHKPLVLR----------------------------PGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred CCCCCHHHHHHHHHcCCccCC----------------------------CCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 988776666655543221100 0334568899999999999999976 58
Q ss_pred HHHHHHhhc
Q 001142 1126 LYEMFVART 1134 (1142)
Q Consensus 1126 VL~~L~~~~ 1134 (1142)
+++|+|+..
T Consensus 248 i~~h~~f~~ 256 (325)
T cd05604 248 IQEHPFFES 256 (325)
T ss_pred HhcCCCcCC
Confidence 999999875
No 111
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-36 Score=342.55 Aligned_cols=258 Identities=28% Similarity=0.450 Sum_probs=214.9
Q ss_pred cceeeeecccCceEEEEEEECCccEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
|.-.+.||.|+||.||-|++......|+|++....... .....++ ++|+..|.+++|||+|.+-|+|.-+.
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDI----lKEVrFL~~l~HPntieYkgCyLre~---- 99 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI----LKEVRFLRQLRHPNTIEYKGCYLREH---- 99 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHH----HHHHHHHHhccCCCcccccceeeccc----
Confidence 56778999999999999998655555666555433221 2333344 89999999999999999999998654
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
..|||||||- ||-.+++.-+ .+++.+.++..|..+.+.||.|||+.+.||||||+.|||+++.
T Consensus 100 ----------TaWLVMEYCl-GSAsDlleVh----kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~-- 162 (948)
T KOG0577|consen 100 ----------TAWLVMEYCL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEP-- 162 (948)
T ss_pred ----------hHHHHHHHHh-ccHHHHHHHH----hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCC--
Confidence 3499999996 8888888653 3579999999999999999999999999999999999999887
Q ss_pred cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1047 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~ 1047 (1142)
+.|||+|||.|..... ...++|||+|||||++..+. .+.|+-|+||||||++..||...+
T Consensus 163 -----g~VKLaDFGSAsi~~P--------------AnsFvGTPywMAPEVILAMD-EGqYdgkvDvWSLGITCIELAERk 222 (948)
T KOG0577|consen 163 -----GLVKLADFGSASIMAP--------------ANSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAERK 222 (948)
T ss_pred -----CeeeeccccchhhcCc--------------hhcccCCccccchhHheecc-ccccCCccceeeccchhhhhhhcC
Confidence 8999999999865432 24678999999999998754 568999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 001142 1048 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY 1127 (1142)
Q Consensus 1048 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL 1127 (1142)
+|+..++.+.....|.....|.+... +.++.++.|+..||+.-|.+|||.++++
T Consensus 223 PPlFnMNAMSALYHIAQNesPtLqs~--------------------------eWS~~F~~Fvd~CLqKipqeRptse~ll 276 (948)
T KOG0577|consen 223 PPLFNMNAMSALYHIAQNESPTLQSN--------------------------EWSDYFRNFVDSCLQKIPQERPTSEELL 276 (948)
T ss_pred CCccCchHHHHHHHHHhcCCCCCCCc--------------------------hhHHHHHHHHHHHHhhCcccCCcHHHHh
Confidence 99998888887778877766655421 5677899999999999999999999999
Q ss_pred HHHHhhcCCC
Q 001142 1128 EMFVARTSSS 1137 (1142)
Q Consensus 1128 ~~L~~~~ss~ 1137 (1142)
+|.|...+-+
T Consensus 277 ~H~fv~R~Rp 286 (948)
T KOG0577|consen 277 KHRFVLRERP 286 (948)
T ss_pred hcchhccCCC
Confidence 9999876543
No 112
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=4.1e-35 Score=343.19 Aligned_cols=260 Identities=25% Similarity=0.375 Sum_probs=196.9
Q ss_pred CCCcceeeeecccCceEEEEEEE-------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~-------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g 877 (1142)
.++|++.++||+|+||.||+|++ .+..+|+|+.+ ... .....+. +.+|+.++..+ +|||||++++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~--~~~-~~~~~~~----~~~Ei~il~~l~~HpnIv~l~~ 106 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLK--PSA-HLTEREA----LMSELKVLSYLGNHINIVNLLG 106 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEecc--CCc-CcHHHHH----HHHHHHHHHHhcCCcceeeeee
Confidence 45799999999999999999975 23357777643 211 1222233 37899999999 7999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-------------------------------------
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE------------------------------------- 920 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~------------------------------------- 920 (1142)
++.+.+. .++||||+++|+|.++++....
T Consensus 107 ~~~~~~~--------------~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 172 (375)
T cd05104 107 ACTVGGP--------------TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMK 172 (375)
T ss_pred eeccCCc--------------ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcC
Confidence 9876553 3999999999999999975211
Q ss_pred ---------------------------------cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 921 ---------------------------------TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 921 ---------------------------------~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
.....+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~-- 250 (375)
T cd05104 173 PGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHG-- 250 (375)
T ss_pred CCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECC--
Confidence 012357889999999999999999999999999999999999876
Q ss_pred cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-C
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-L 1046 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G 1046 (1142)
..+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||++|||++ |
T Consensus 251 -----~~~kl~DfG~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~sDi~slG~~l~ellt~g 313 (375)
T cd05104 251 -----RITKICDFGLARDIRNDSNY--------VVKGNARLPVKWMAPESIFN----CVYTFESDVWSYGILLWEIFSLG 313 (375)
T ss_pred -----CcEEEecCccceeccCcccc--------cccCCCCCCcceeChhHhcC----CCCCCCCCHHHHHHHHHHHHhcC
Confidence 78999999999765332110 01112335677999999875 568899999999999999998 8
Q ss_pred CCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1047 QVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1047 ~~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
..||...... .....+..+..+..+ ...+.++.+|+.+||+.||++|||+.|
T Consensus 314 ~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dP~~RPs~~e 366 (375)
T cd05104 314 SSPYPGMPVDSKFYKMIKEGYRMLSP---------------------------ECAPSEMYDIMKSCWDADPLKRPTFKQ 366 (375)
T ss_pred CCCCCCCCchHHHHHHHHhCccCCCC---------------------------CCCCHHHHHHHHHHccCChhHCcCHHH
Confidence 9999765433 233333332211100 023456899999999999999999999
Q ss_pred HHHHHHh
Q 001142 1126 LYEMFVA 1132 (1142)
Q Consensus 1126 VL~~L~~ 1132 (1142)
|++.++.
T Consensus 367 il~~l~~ 373 (375)
T cd05104 367 IVQLIEQ 373 (375)
T ss_pred HHHHHHh
Confidence 9998875
No 113
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.4e-34 Score=321.00 Aligned_cols=264 Identities=20% Similarity=0.331 Sum_probs=199.3
Q ss_pred cceeeeecccCceEEEEEEECCc----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSA----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~----~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
|.+.++||+|+||.||+|.+... .+|+|..+.. .......+.+ .+|+.+++.++||||+++++++.....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~~ 74 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIA--ICTRSEMEDF----LSEAVCMKEFDHPNVMRLIGVCLQTVE 74 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccC--cCCHHHHHHH----HHHHHHHHhCCCCCcceEEEEEccCCc
Confidence 45789999999999999998433 3666664332 2233334444 789999999999999999998754321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. ......++||||+++++|.+++..... .....+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 75 ~--------~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~ 146 (272)
T cd05075 75 S--------EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN 146 (272)
T ss_pred c--------cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc
Confidence 1 112345899999999999998853221 1234589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+++........ .......+++.|+|||+..+ ..++.++||||||+++|||
T Consensus 147 ~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~----~~~~~~~Di~slG~il~el 207 (272)
T cd05075 147 EN-------MNVCVADFGLSKKIYNGDYY--------RQGRIAKMPVKWIAIESLAD----RVYTTKSDVWSFGVTMWEI 207 (272)
T ss_pred CC-------CCEEECCCCcccccCcccce--------ecCCcccCCcccCCHHHccC----CCcChHHHHHHHHHHHHHH
Confidence 77 78999999999765432110 01112346778999999875 5678999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |+.||.+....+....+..+..+..+ ...+..+.+++.+||+.||++|||
T Consensus 208 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rps 260 (272)
T cd05075 208 ATRGQTPYPGVENSEIYDYLRQGNRLKQP---------------------------PDCLDGLYSLMSSCWLLNPKDRPS 260 (272)
T ss_pred HcCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcCCCcccCcC
Confidence 99 89999877766666665544322111 034556899999999999999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
+.++++++..
T Consensus 261 ~~~l~~~l~~ 270 (272)
T cd05075 261 FETLRCELEK 270 (272)
T ss_pred HHHHHHHHHh
Confidence 9999998753
No 114
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.9e-36 Score=357.96 Aligned_cols=268 Identities=25% Similarity=0.377 Sum_probs=218.2
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
..+-.+..+.+.||+|+||.||+|+.. +....|.||.++.. ......++| ++|++++..++|||||+++|
T Consensus 482 ~i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF----~REaeLla~l~H~nIVrLlG 556 (774)
T KOG1026|consen 482 EIPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDF----RREAELLAELQHPNIVRLLG 556 (774)
T ss_pred EechhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHH----HHHHHHHHhccCCCeEEEEE
Confidence 344556789999999999999999862 34455555556642 223345566 89999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccC---------CCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG---------EKHVSVKLALFIAQDVAAALVELHSK 948 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~---------~~~ls~~~i~~Ia~qIa~gL~yLHs~ 948 (1142)
.+.+.+.+ ++|+|||..|||..+++...... ..+++..+.+.||.|||.|++||-++
T Consensus 557 VC~~~~P~--------------~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~ 622 (774)
T KOG1026|consen 557 VCREGDPL--------------CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH 622 (774)
T ss_pred EEccCCee--------------EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 99987654 99999999999999998654322 22388999999999999999999999
Q ss_pred CccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCC
Q 001142 949 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYG 1028 (1142)
Q Consensus 949 gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s 1028 (1142)
.+|||||-..|+||.++ ..|||+|||+++..-..... . ......-...|||||.+.. ..|+
T Consensus 623 ~FVHRDLATRNCLVge~-------l~VKIsDfGLsRdiYssDYY---k-----~~~~t~lPIRWMppEsIly----~kFT 683 (774)
T KOG1026|consen 623 HFVHRDLATRNCLVGEN-------LVVKISDFGLSRDIYSSDYY---K-----VRGNTLLPIRWMPPESILY----GKFT 683 (774)
T ss_pred cccccchhhhhceeccc-------eEEEecccccchhhhhhhhh---c-----ccCCceeeeecCCHHHhhc----Cccc
Confidence 99999999999999988 89999999999864332211 1 1112234678999999987 6899
Q ss_pred chhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHH
Q 001142 1029 LEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVD 1107 (1142)
Q Consensus 1029 ~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~d 1107 (1142)
.++|||||||+|||+++ |+.||.+.+..++++.|+.+....-+ ..++.++.+
T Consensus 684 teSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~P---------------------------e~CP~~vY~ 736 (774)
T KOG1026|consen 684 TESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCP---------------------------ENCPTEVYS 736 (774)
T ss_pred chhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccCC---------------------------CCCCHHHHH
Confidence 99999999999999999 99999999999999999887653222 278889999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1108 VFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1108 LI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
|+..||+.+|.+||++.||-..|.....
T Consensus 737 LM~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 737 LMLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 9999999999999999999888766543
No 115
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.4e-35 Score=339.05 Aligned_cols=248 Identities=26% Similarity=0.297 Sum_probs=192.0
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHhhCCCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
++||+|+||.||+|++ .+..+|+|+....... ..... ..+..|.. +++.++||||+++++++.+.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~----~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~------ 69 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL-KKKEQ----NHIMAERNVLLKNLKHPFLVGLHYSFQTAE------ 69 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhhHH----HHHHHHHHHHHHhCCCCCccceeeEEEcCC------
Confidence 4799999999999998 4567888876432111 11111 22245554 577889999999999887654
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~---- 132 (321)
T cd05603 70 --------KLYFVLDYVNGGELFFHLQR-----ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ---- 132 (321)
T ss_pred --------EEEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC----
Confidence 34999999999999988865 3468899999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~p 195 (321)
T cd05603 133 ---GHVVLTDFGLCKEGVEPE----------ETTSTFCGTPEYLAPEVLRK----EPYDRTVDWWCLGAVLYEMLYGLPP 195 (321)
T ss_pred ---CCEEEccCCCCccCCCCC----------CccccccCCcccCCHHHhcC----CCCCCcCcccccchhhhhhhcCCCC
Confidence 789999999986432111 01123468999999999875 5688999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH----HH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA----GD 1125 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa----~E 1125 (1142)
|.+.+..+....+..... .++ ...+..+.+++.+||+.||.+||++ .+
T Consensus 196 f~~~~~~~~~~~i~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (321)
T cd05603 196 FYSRDVSQMYDNILHKPL-QLP---------------------------GGKTVAACDLLVGLLHKDQRRRLGAKADFLE 247 (321)
T ss_pred CCCCCHHHHHHHHhcCCC-CCC---------------------------CCCCHHHHHHHHHHccCCHhhcCCCCCCHHH
Confidence 988776666655543221 100 1334568999999999999999875 58
Q ss_pred HHHHHHhh
Q 001142 1126 LYEMFVAR 1133 (1142)
Q Consensus 1126 VL~~L~~~ 1133 (1142)
+++|+|+.
T Consensus 248 ~~~~~~~~ 255 (321)
T cd05603 248 IKNHVFFS 255 (321)
T ss_pred HhCCCCcC
Confidence 99998875
No 116
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.1e-34 Score=318.68 Aligned_cols=255 Identities=22% Similarity=0.324 Sum_probs=200.9
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|++|.||++.+. +..+++|....+. ......+.+ .+|+.++++++|||++++++.+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRN--ASRRERKAA----EQEAQLLSQLKHPNIVAYRESWEGED-- 72 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhh--cCHHHHHHH----HHHHHHHHhCCCCCeeeeeeeecCCC--
Confidence 4899999999999999999874 4567777654322 122222333 78999999999999999998775322
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
...++||||+++++|.+++... ....+++.++..++.|++.|++|||++||+||||||+||+++.+
T Consensus 73 -----------~~~~lv~e~~~~~~l~~~l~~~---~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~ 138 (257)
T cd08223 73 -----------GLLYIVMGFCEGGDLYHKLKEQ---KGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRT 138 (257)
T ss_pred -----------CEEEEEecccCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecC
Confidence 1358999999999999999752 23468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+........ ......+++.|+|||++.+ ..++.++||||||+++++|++
T Consensus 139 -------~~~~l~df~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~~l~~ 197 (257)
T cd08223 139 -------NIIKVGDLGIARVLENQCD----------MASTLIGTPYYMSPELFSN----KPYNYKSDVWALGCCVYEMAT 197 (257)
T ss_pred -------CcEEEecccceEEecccCC----------ccccccCCcCccChhHhcC----CCCCchhhhHHHHHHHHHHHc
Confidence 7899999999876532111 1123458899999999875 467889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||...+.......+..+..+..+ ...++.+.+++.+||+.||.+|||+.+
T Consensus 198 g~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~ 250 (257)
T cd08223 198 LKHAFNAKDMNSLVYRIIEGKLPPMP---------------------------KDYSPELGELIATMLSKRPEKRPSVKS 250 (257)
T ss_pred CCCCCCCCCHHHHHHHHHhcCCCCCc---------------------------cccCHHHHHHHHHHhccCcccCCCHHH
Confidence 99999876655554444433322211 134567999999999999999999999
Q ss_pred HHHHHHh
Q 001142 1126 LYEMFVA 1132 (1142)
Q Consensus 1126 VL~~L~~ 1132 (1142)
+++|+|+
T Consensus 251 ~l~~~~~ 257 (257)
T cd08223 251 ILRQPYI 257 (257)
T ss_pred HhcCCCC
Confidence 9999985
No 117
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2e-35 Score=339.39 Aligned_cols=249 Identities=22% Similarity=0.341 Sum_probs=191.6
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
++||+|+||.||+|++. +..+|+|+.+..... ...... .+.+|..++.++ +||||+++++++.+..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~-~~~~~~----~~~~e~~il~~~~~hp~Iv~~~~~~~~~~------ 69 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN-DDEDID----WVQTEKHVFETASNHPFLVGLHSCFQTES------ 69 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHH----HHHHHHHHHHhccCCCCCCceEEEEEcCC------
Confidence 47999999999999984 567888876532211 111222 237899999988 6999999999988655
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~g~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~---- 132 (329)
T cd05588 70 --------RLFFVIEFVSGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAE---- 132 (329)
T ss_pred --------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----
Confidence 34999999999999988865 2469999999999999999999999999999999999999877
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~~l~el~~g~~P 195 (329)
T cd05588 133 ---GHIKLTDYGMCKEGIRPG----------DTTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGVLMFEMMAGRSP 195 (329)
T ss_pred ---CCEEECcCccccccccCC----------CccccccCCccccCHHHHcC----CCCCCccceechHHHHHHHHHCCCC
Confidence 789999999986422111 11123468999999999876 5678999999999999999999999
Q ss_pred CCCCCH--------HH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1050 YMGLSE--------LE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1050 f~~~~~--------~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|..... .+ ..+.+.... ..+ +...+..+.+++.+||+.||.+|
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------------------------p~~~~~~~~~li~~~L~~dP~~R 247 (329)
T cd05588 196 FDIVGMSDNPDQNTEDYLFQVILEKQ-IRI---------------------------PRSLSVKASSVLKGFLNKDPKER 247 (329)
T ss_pred cccccccccccccchHHHHHHHHcCC-CCC---------------------------CCCCCHHHHHHHHHHhccCHHHc
Confidence 963211 11 112221111 000 01345668999999999999999
Q ss_pred CC------HHHHHHHHHhhc
Q 001142 1121 PT------AGDLYEMFVART 1134 (1142)
Q Consensus 1121 PS------a~EVL~~L~~~~ 1134 (1142)
|+ ++++++|+|+..
T Consensus 248 ~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 248 LGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred CCCCCCCCHHHHhcCCCCCC
Confidence 87 799999999974
No 118
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=6.9e-35 Score=334.19 Aligned_cols=290 Identities=19% Similarity=0.222 Sum_probs=199.7
Q ss_pred eeeeeccc--CceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 811 SCDEAGKS--VSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 811 l~~~LG~G--sfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
+.++||+| +||+||++++. +..+|+|....+ .......+ .+.+|+.+++.++||||+++++++..++.
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~----~~~~e~~~l~~l~hpniv~~~~~~~~~~~-- 73 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLE--ACTNEMVT----FLQGELHVSKLFNHPNIVPYRATFIADNE-- 73 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechh--hccHHHHH----HHHHHHHHHHhcCCCCeeeEEEEEEECCE--
Confidence 56889999 77899999884 556677764332 22222222 34789999999999999999999987653
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
.++||||+++++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 74 ------------~~lv~e~~~~~~l~~~~~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~- 137 (327)
T cd08227 74 ------------LWVVTSFMAYGSAKDLICTHF---MDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD- 137 (327)
T ss_pred ------------EEEEEeccCCCcHHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecC-
Confidence 499999999999999997521 2358999999999999999999999999999999999999887
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++++||+.+............ .........++..|+|||++.+. ...++.++|||||||++|||++|
T Consensus 138 ------~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~~DiwslG~il~el~~g 206 (327)
T cd08227 138 ------GKVYLSGLRSNLSMINHGQRLRV---VHDFPKYSVKVLPWLSPEVLQQN--LQGYDAKSDIYSVGITACELANG 206 (327)
T ss_pred ------CcEEEcccchhhccccccccccc---cccccccccceecccChHHhhcc--cCCCCchhhHHHHHHHHHHHHHC
Confidence 78999999876543221110000 00011233577889999998652 13578999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccc---------ccccccc------cCC---CCCCchhhhhhHHHHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---------HEHEVAQ------SGS---GFEKPEAELETLSFLVDV 1108 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---------~~~~~~~------~~~---~~~~~~~~~~~~~~L~dL 1108 (1142)
+.||......+.......+..+...+........ ....... ... ...........++.+.++
T Consensus 207 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 286 (327)
T cd08227 207 HVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHF 286 (327)
T ss_pred CCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHH
Confidence 9999865554433333322222111100000000 0000000 000 000000112346789999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+.+||+.||++|||++|+++|+|++.-
T Consensus 287 i~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 287 VEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred HHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 999999999999999999999999764
No 119
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.1e-34 Score=321.02 Aligned_cols=264 Identities=28% Similarity=0.381 Sum_probs=203.3
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+|.+...||+|++|.||+|.+ .+..+++|.......... ......+...+.+|+.++++++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 478889999999999999987 456788887654432222 12222333456899999999999999999999886553
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||++|++||||+|+||+++.
T Consensus 81 --------------~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~ 141 (267)
T cd06628 81 --------------LNIFLEYVPGGSVAALLNN-----YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDN 141 (267)
T ss_pred --------------cEEEEEecCCCCHHHHHHh-----ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcC
Confidence 3999999999999999976 246889999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||.++.......... .........|+..|+|||.+.+ ..++.++|||||||++|+|+
T Consensus 142 ~-------~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~~~~y~~pe~~~~----~~~~~~~Dv~slG~il~~l~ 206 (267)
T cd06628 142 K-------GGIKISDFGISKKLEANSLSTK----TNGARPSLQGSVFWMAPEVVKQ----TSYTRKADIWSLGCLVVEML 206 (267)
T ss_pred C-------CCEEecccCCCcccccccccCC----ccccccccCCCcCccChhHhcc----CCCCchhhhHHHHHHHHHHh
Confidence 7 7899999999976543111100 0011123458889999999875 45778999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|+.||...........+.....+..+ ...+..+.+++.+||+.||.+||++.
T Consensus 207 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 259 (267)
T cd06628 207 TGKHPFPDCTQLQAIFKIGENASPEIP---------------------------SNISSEAIDFLEKTFEIDHNKRPTAA 259 (267)
T ss_pred hCCCCCCCccHHHHHHHHhccCCCcCC---------------------------cccCHHHHHHHHHHccCCchhCcCHH
Confidence 999999875544333333222221111 13456789999999999999999999
Q ss_pred HHHHHHHh
Q 001142 1125 DLYEMFVA 1132 (1142)
Q Consensus 1125 EVL~~L~~ 1132 (1142)
|+++|+|+
T Consensus 260 ~il~~~~~ 267 (267)
T cd06628 260 ELLKHPFL 267 (267)
T ss_pred HHhhCCCC
Confidence 99999885
No 120
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-37 Score=327.44 Aligned_cols=258 Identities=26% Similarity=0.431 Sum_probs=211.0
Q ss_pred cceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
|.+.++||+|+||.||+|.++.....++++++.+. .+.+++ .+|+.||+++..|+||++||.|....
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEI----IKEISIMQQC~S~yVVKYYGSYFK~s----- 101 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEI----IKEISIMQQCKSKYVVKYYGSYFKHS----- 101 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHH----HHHHHHHHHcCCchhhhhhhhhccCC-----
Confidence 78999999999999999998655555555555442 233444 78999999999999999999877544
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
.+|||||||-.||..+.++. .++++++.++..+++..++||+|||...-||||||+.|||++.+
T Consensus 102 ---------DLWIVMEYCGAGSiSDI~R~----R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~--- 165 (502)
T KOG0574|consen 102 ---------DLWIVMEYCGAGSISDIMRA----RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD--- 165 (502)
T ss_pred ---------ceEeehhhcCCCcHHHHHHH----hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc---
Confidence 34999999999999999985 35689999999999999999999999999999999999999888
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1048 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~ 1048 (1142)
+..||+|||.|..+.+.- ...++..|||.|||||++.. -.|+.++||||||++..||..|++
T Consensus 166 ----G~AKLADFGVAGQLTDTM----------AKRNTVIGTPFWMAPEVI~E----IGY~~~ADIWSLGITaIEMAEG~P 227 (502)
T KOG0574|consen 166 ----GIAKLADFGVAGQLTDTM----------AKRNTVIGTPFWMAPEVIEE----IGYDTKADIWSLGITAIEMAEGRP 227 (502)
T ss_pred ----chhhhhhccccchhhhhH----------HhhCccccCcccccHHHHHH----hccchhhhHhhhcchhhhhhcCCC
Confidence 899999999997665421 13356789999999999986 568899999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 001142 1049 PYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYE 1128 (1142)
Q Consensus 1049 Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~ 1128 (1142)
||.+..+....-.|-...+|. +..| ...+.++.++++.||...|++|-||-++++
T Consensus 228 PYsDIHPMRAIFMIPT~PPPT----------------------F~KP---E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 228 PYSDIHPMRAIFMIPTKPPPT----------------------FKKP---EEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CcccccccceeEeccCCCCCC----------------------CCCh---HhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 998766654333332222211 1121 256788999999999999999999999999
Q ss_pred HHHhhcCCCC
Q 001142 1129 MFVARTSSSI 1138 (1142)
Q Consensus 1129 ~L~~~~ss~~ 1138 (1142)
|+|.+.....
T Consensus 283 H~FiknA~g~ 292 (502)
T KOG0574|consen 283 HTFIKNAPGC 292 (502)
T ss_pred hhhhcCCCcc
Confidence 9999876554
No 121
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=4.6e-35 Score=342.65 Aligned_cols=261 Identities=23% Similarity=0.346 Sum_probs=196.6
Q ss_pred CCCCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 876 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~ 876 (1142)
..++|++.+.||+|+||.||+|.+.. ..||+|+.+.. . ....... +.+|+.+++++ +|||||+++
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~-~~~~~~~----~~~E~~il~~l~~h~nIv~~~ 108 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKAS--A-HTDEREA----LMSELKILSHLGQHKNIVNLL 108 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCC--C-CHHHHHH----HHHHHHHHHhhccCCceeeEe
Confidence 34579999999999999999998621 35777764322 1 2222233 47899999999 799999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc------------------------------------
Q 001142 877 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE------------------------------------ 920 (1142)
Q Consensus 877 g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~------------------------------------ 920 (1142)
+++.+.+. .++||||+++|+|.++++....
T Consensus 109 ~~~~~~~~--------------~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (374)
T cd05106 109 GACTHGGP--------------VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFS 174 (374)
T ss_pred eEecCCCC--------------eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccc
Confidence 99876553 4999999999999999865321
Q ss_pred -----------------------------cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCC
Q 001142 921 -----------------------------TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADG 971 (1142)
Q Consensus 921 -----------------------------~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~ 971 (1142)
....++++..+.+|+.||+.||.|||++||+||||||+|||++.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~------ 248 (374)
T cd05106 175 SQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDG------ 248 (374)
T ss_pred ccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCC------
Confidence 011357889999999999999999999999999999999999876
Q ss_pred CCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 001142 972 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPY 1050 (1142)
Q Consensus 972 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf 1050 (1142)
+.+||+|||+++........ .......++..|+|||++.. ..++.++|||||||++|||++ |+.||
T Consensus 249 -~~~kL~DfGla~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwSlGvil~ellt~G~~Pf 315 (374)
T cd05106 249 -RVAKICDFGLARDIMNDSNY--------VVKGNARLPVKWMAPESIFD----CVYTVQSDVWSYGILLWEIFSLGKSPY 315 (374)
T ss_pred -CeEEEeeceeeeeccCCcce--------eeccCCCCccceeCHHHhcC----CCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 78999999998754322110 01112235678999999865 568899999999999999997 99999
Q ss_pred CCCCHHHHH-HHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 001142 1051 MGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEM 1129 (1142)
Q Consensus 1051 ~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~ 1129 (1142)
......... ..+..+..+..+ ...++++.+++.+||+.||.+|||+.+|++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 316 PGILVNSKFYKMVKRGYQMSRP---------------------------DFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred ccccccHHHHHHHHcccCccCC---------------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 765433322 222221111100 0235679999999999999999999999998
Q ss_pred HHh
Q 001142 1130 FVA 1132 (1142)
Q Consensus 1130 L~~ 1132 (1142)
+..
T Consensus 369 l~~ 371 (374)
T cd05106 369 IQR 371 (374)
T ss_pred HHH
Confidence 765
No 122
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.1e-34 Score=320.00 Aligned_cols=254 Identities=23% Similarity=0.385 Sum_probs=199.8
Q ss_pred CCCCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+.++|++.++||+|+||.||+|.+. +..+++|..... ....+.+ .+|+.++++++||||+++++.+.+..
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-----~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 74 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-----TMSVQAF----LEEANLMKTLQHDKLVRLYAVVTKEE 74 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-----chhHHHH----HHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4567999999999999999999874 455777764321 1222334 78999999999999999999887654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++||||+++++|.+++... ....+++..+..++.|++.||+|||+.+++||||||+||+++
T Consensus 75 ~--------------~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~ 137 (261)
T cd05072 75 P--------------IYIITEYMAKGSLLDFLKSD---EGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS 137 (261)
T ss_pred C--------------cEEEEecCCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec
Confidence 3 39999999999999999752 234688999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+......... ......++..|+|||++.. ..++.++|||||||++|+|
T Consensus 138 ~~-------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 197 (261)
T cd05072 138 ES-------LMCKIADFGLARVIEDNEYT---------AREGAKFPIKWTAPEAINF----GSFTIKSDVWSFGILLYEI 197 (261)
T ss_pred CC-------CcEEECCCccceecCCCcee---------ccCCCccceecCCHHHhcc----CCCChhhhhhhhHHHHHHH
Confidence 87 78999999999765432111 1112235678999999865 4578899999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |..||......+....+......... ...+..+.+++.+||..+|++||+
T Consensus 198 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~ 250 (261)
T cd05072 198 VTYGKIPYPGMSNSDVMSALQRGYRMPRM---------------------------ENCPDELYDIMKTCWKEKAEERPT 250 (261)
T ss_pred HccCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHccCCcccCcC
Confidence 98 99999876666655555433221100 134556899999999999999999
Q ss_pred HHHHHHHHH
Q 001142 1123 AGDLYEMFV 1131 (1142)
Q Consensus 1123 a~EVL~~L~ 1131 (1142)
++++.+.+.
T Consensus 251 ~~~i~~~l~ 259 (261)
T cd05072 251 FDYLQSVLD 259 (261)
T ss_pred HHHHHHHHh
Confidence 999998764
No 123
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.1e-34 Score=328.99 Aligned_cols=262 Identities=26% Similarity=0.431 Sum_probs=199.6
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 880 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~ 880 (1142)
..+.+|++.+.||+|+||.||+|.+. +..++++++..+.. ........+ .+|+.++.++ +||||+++++++.
T Consensus 4 ~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~----~~Ei~~l~~l~~h~~iv~~~~~~~ 78 (303)
T cd05088 4 LEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDF----AGELEVLCKLGHHPNIINLLGACE 78 (303)
T ss_pred cchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHH----HHHHHHHHHhcCCCCcceEEEEEC
Confidence 45678999999999999999999874 34455555544321 122223333 7899999999 7999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----------cCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELHSKH 949 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-----------~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g 949 (1142)
..+. .++||||+++++|.++++.... .....+++..++.++.||+.||+|||++|
T Consensus 79 ~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g 144 (303)
T cd05088 79 HRGY--------------LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ 144 (303)
T ss_pred CCCC--------------ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 6553 3999999999999999975321 11235889999999999999999999999
Q ss_pred ccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001142 950 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1029 (1142)
Q Consensus 950 IvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1029 (1142)
|+||||||+|||++.+ +.+||+|||++....... ......++..|+|||++.+ ..++.
T Consensus 145 i~H~dlkp~Nili~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~ 202 (303)
T cd05088 145 FIHRDLAARNILVGEN-------YVAKIADFGLSRGQEVYV-----------KKTMGRLPVRWMAIESLNY----SVYTT 202 (303)
T ss_pred ccccccchheEEecCC-------CcEEeCccccCcccchhh-----------hcccCCCcccccCHHHHhc----cCCcc
Confidence 9999999999999877 789999999985321110 1112234667999998865 45789
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHH
Q 001142 1030 EVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1108 (1142)
Q Consensus 1030 ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1108 (1142)
++|||||||++|||+| |..||......+....+.....+..+ ...+..+.++
T Consensus 203 ~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l 255 (303)
T cd05088 203 NSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP---------------------------LNCDDEVYDL 255 (303)
T ss_pred cccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCC---------------------------CCCCHHHHHH
Confidence 9999999999999998 99999876665555444322111100 1334568999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
+.+||+.+|++||++++++.++...
T Consensus 256 i~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 256 MRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHH
Confidence 9999999999999999999987654
No 124
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=2.9e-35 Score=338.19 Aligned_cols=250 Identities=22% Similarity=0.344 Sum_probs=190.9
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.||+|+||.||+|++. +..+|+|+.+..... ....... +.+|+.++.++ +||||+++++++.+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~----~~~E~~~l~~~~~hp~iv~~~~~~~~~~------ 69 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN-DDEDIDW----VQTEKHVFEQASNHPFLVGLHSCFQTES------ 69 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc-chhHHHH----HHHHHHHHHhcCCCCcCCceeeEEEeCC------
Confidence 47999999999999974 556888876533211 1122222 36888888777 7999999999988654
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~E~~~~~~L~~~~~~-----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~---- 132 (329)
T cd05618 70 --------RLFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---- 132 (329)
T ss_pred --------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC----
Confidence 35999999999999988865 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~DfG~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~P 195 (329)
T cd05618 133 ---GHIKLTDYGMCKEGLRPG----------DTTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGVLMFEMMAGRSP 195 (329)
T ss_pred ---CCEEEeeCCccccccCCC----------CccccccCCccccCHHHHcC----CCCCCccceecccHHHHHHhhCCCC
Confidence 789999999986432111 01123468999999999876 5678999999999999999999999
Q ss_pred CCCCCH---------HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1050 YMGLSE---------LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1050 f~~~~~---------~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|..... ..+...+.... ..++ ...+..+.+++.+||+.||++|
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~i~~~~-~~~p---------------------------~~~~~~~~~ll~~~L~~dP~~R 247 (329)
T cd05618 196 FDIVGSSDNPDQNTEDYLFQVILEKQ-IRIP---------------------------RSLSVKAASVLKSFLNKDPKER 247 (329)
T ss_pred CccCCCcCCcccccHHHHHHHHhcCC-CCCC---------------------------CCCCHHHHHHHHHHhcCCHHHc
Confidence 953110 11111111111 0000 1345668999999999999999
Q ss_pred CC------HHHHHHHHHhhcC
Q 001142 1121 PT------AGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PS------a~EVL~~L~~~~s 1135 (1142)
|+ +.++++|+|++..
T Consensus 248 ~~~~~~~~~~~i~~hp~f~~~ 268 (329)
T cd05618 248 LGCHPQTGFADIQGHPFFRNV 268 (329)
T ss_pred CCCCCCCCHHHHhcCCCCCCC
Confidence 98 5899999998653
No 125
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.3e-34 Score=323.93 Aligned_cols=261 Identities=22% Similarity=0.359 Sum_probs=199.7
Q ss_pred CCCCcceeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
++.+|++.++||+|+||+||+|.+ .+..+++|.. +... .......+ .+|+.++++++||||++++++
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~--~~~~-~~~~~~~~----~~E~~~l~~l~h~niv~~~~~ 75 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTL--KDIN-NPQQWGEF----QQEASLMAELHHPNIVCLLGV 75 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEec--cCCC-CHHHHHHH----HHHHHHHhhCCCCCeeeEEEE
Confidence 457899999999999999999985 2234555553 3221 22222334 789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc------------cCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE------------TGEKHVSVKLALFIAQDVAAALVELH 946 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~------------~~~~~ls~~~i~~Ia~qIa~gL~yLH 946 (1142)
+..... .|+||||+++++|.+++..... .....+++..+..++.|++.||.|||
T Consensus 76 ~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 141 (283)
T cd05090 76 VTQEQP--------------VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS 141 (283)
T ss_pred EecCCc--------------eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 876543 4999999999999999864211 01234788999999999999999999
Q ss_pred hCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001142 947 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1026 (1142)
Q Consensus 947 s~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1026 (1142)
++||+||||||+|||++.+ +.+||+|||+++........ .......++..|+|||++.+ ..
T Consensus 142 ~~~i~H~dlkp~nili~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~ 202 (283)
T cd05090 142 SHFFVHKDLAARNILIGEQ-------LHVKISDLGLSREIYSADYY--------RVQPKSLLPIRWMPPEAIMY----GK 202 (283)
T ss_pred hcCeehhccccceEEEcCC-------CcEEeccccccccccCCcce--------ecccCCCccceecChHHhcc----CC
Confidence 9999999999999999877 78999999999764322110 01122345778999999865 45
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHH
Q 001142 1027 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1105 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1105 (1142)
++.++|||||||++|||++ |..||.+.....+...+.....+..+ ...+..+
T Consensus 203 ~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~ 255 (283)
T cd05090 203 FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCS---------------------------EDCPPRM 255 (283)
T ss_pred CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHH
Confidence 7899999999999999998 99999877666665555443322111 1345668
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001142 1106 VDVFRRCTEENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1106 ~dLI~~CL~~DP~~RPSa~EVL~~L~~ 1132 (1142)
.+++.+||+.||++||++.+|++++..
T Consensus 256 ~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 256 YSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 999999999999999999999998753
No 126
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.8e-34 Score=319.34 Aligned_cols=254 Identities=23% Similarity=0.401 Sum_probs=200.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||.||+|.+. +..+++|+.. .. ......+ .+|++++++++||||+++++++..+.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~--~~---~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--ED---TMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREP 75 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEec--CC---chHHHHH----HHHHHHHHhCCCCChhheEEEEcCCC
Confidence 346899999999999999999984 5667777643 21 1223334 78999999999999999999987655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++||||+++++|.+++.. .....+++..+..++.|++.||+|||++||+||||||+||+++
T Consensus 76 ~--------------~~lv~e~~~~~~L~~~~~~---~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~ 138 (263)
T cd05052 76 P--------------FYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 138 (263)
T ss_pred C--------------cEEEEEeCCCCcHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc
Confidence 3 3999999999999999875 2234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||.+......... ......+++.|+|||.+.+ ..++.++|||||||++|||
T Consensus 139 ~~-------~~~kl~df~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~el 198 (263)
T cd05052 139 EN-------HLVKVADFGLSRLMTGDTYT---------AHAGAKFPIKWTAPESLAY----NKFSIKSDVWAFGVLLWEI 198 (263)
T ss_pred CC-------CcEEeCCCccccccccceee---------ccCCCCCccccCCHHHhcc----CCCCchhHHHHHHHHHHHH
Confidence 77 78999999999765432111 1112234667999998865 5678899999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |..||.+....+....+.....+..+ ...+..+.+++.+||+.||++|||
T Consensus 199 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~cl~~~p~~Rp~ 251 (263)
T cd05052 199 ATYGMSPYPGIDLSQVYELLEKGYRMERP---------------------------EGCPPKVYELMRACWQWNPSDRPS 251 (263)
T ss_pred HcCCCCCCCCCCHHHHHHHHHCCCCCCCC---------------------------CCCCHHHHHHHHHHccCCcccCCC
Confidence 98 99999877666665555433221111 134567999999999999999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
+.++++.+..
T Consensus 252 ~~~l~~~l~~ 261 (263)
T cd05052 252 FAEIHQAFET 261 (263)
T ss_pred HHHHHHHHHh
Confidence 9999998653
No 127
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=1.9e-34 Score=318.13 Aligned_cols=247 Identities=22% Similarity=0.342 Sum_probs=193.9
Q ss_pred eecccCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCC
Q 001142 814 EAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 814 ~LG~GsfG~Vy~a~~----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
.||+|+||.||+|.+ .+..+|+|+.+.. .......+.+ .+|+.+++.+.||||+++++++..+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~------- 68 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKND--NNDPALKDEL----LREANVMQQLDNPYIVRMIGICEAE------- 68 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCC--CCcHHHHHHH----HHHHHHHHhCCCCCcceEEEEEcCC-------
Confidence 689999999999976 3466777774322 2222333334 7899999999999999999987532
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||+|||++||+||||||+||+++.+
T Consensus 69 --------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~---- 131 (257)
T cd05116 69 --------SWMLVMELAELGPLNKFLQK-----NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQ---- 131 (257)
T ss_pred --------CcEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCC----
Confidence 23899999999999999865 2468999999999999999999999999999999999999877
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQV 1048 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~ 1048 (1142)
+.+||+|||.+.......... .......++..|+|||.+.. ..++.++|||||||++|||++ |+.
T Consensus 132 ---~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~el~t~g~~ 197 (257)
T cd05116 132 ---HYAKISDFGLSKALGADENYY-------KAKTHGKWPVKWYAPECMNY----YKFSSKSDVWSFGVLMWEAFSYGQK 197 (257)
T ss_pred ---CeEEECCCccccccCCCCCee-------eecCCCCCCccccCHhHhcc----CCcCchhHHHHHHHHHHHHHhCCCC
Confidence 789999999997654321110 00112234678999998864 467789999999999999998 999
Q ss_pred CCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 001142 1049 PYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYE 1128 (1142)
Q Consensus 1049 Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~ 1128 (1142)
||......+....+..+..+..+. ..++.+.++|.+||+.||++||++++|.+
T Consensus 198 p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 198 PYKGMKGNEVTQMIESGERMECPQ---------------------------RCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred CCCCCCHHHHHHHHHCCCCCCCCC---------------------------CCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 998877777767666544332211 34567999999999999999999999998
Q ss_pred HHH
Q 001142 1129 MFV 1131 (1142)
Q Consensus 1129 ~L~ 1131 (1142)
.|.
T Consensus 251 ~l~ 253 (257)
T cd05116 251 RLR 253 (257)
T ss_pred HHh
Confidence 874
No 128
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=9.3e-35 Score=330.79 Aligned_cols=285 Identities=20% Similarity=0.241 Sum_probs=189.8
Q ss_pred eeeecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 812 CDEAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 812 ~~~LG~GsfG~Vy~a~~~----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
.++||+|+||+||+|++. +..+|+|.. +..... .. +.+|+.++++++||||+++++++....
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~--~~~~~~----~~----~~~E~~~l~~l~h~niv~~~~~~~~~~---- 71 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQI--EGTGIS----MS----ACREIALLRELKHPNVISLQKVFLSHA---- 71 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEE--CCCCCc----HH----HHHHHHHHHhcCCCCCcceeeeEecCC----
Confidence 468999999999999863 345666654 322111 12 268999999999999999999886532
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhc----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE----TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~----~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
....++||||+. ++|.+++..... .....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 72 --------~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~ 142 (317)
T cd07868 72 --------DRKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 142 (317)
T ss_pred --------CcEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEe
Confidence 124699999996 789888764221 1123589999999999999999999999999999999999995
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+. ...+.+||+|||+++........ ........||+.|+|||++.+ ...++.++||||+||++|+|
T Consensus 143 ~~~---~~~~~~kl~DfG~a~~~~~~~~~-------~~~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el 209 (317)
T cd07868 143 GEG---PERGRVKIADMGFARLFNSPLKP-------LADLDPVVVTFWYRAPELLLG---ARHYTKAIDIWAIGCIFAEL 209 (317)
T ss_pred cCC---CCcCcEEEeecCceeccCCCCcc-------ccccCCccccccccCCHHHcC---CCCcCchhhHHHHHHHHHHH
Confidence 321 12268999999999765432111 111224568999999999875 23578999999999999999
Q ss_pred HhCCCCCCCCCH---------HHHHHHHHhCCCCCchhHHhhhccccccc-----cccc-CC--CCC--CchhhhhhHHH
Q 001142 1044 LTLQVPYMGLSE---------LEIHDLIQMGKRPRLTDELEALGSCHEHE-----VAQS-GS--GFE--KPEAELETLSF 1104 (1142)
Q Consensus 1044 LtG~~Pf~~~~~---------~el~~~I~~~~~p~l~~~l~~~~~~~~~~-----~~~~-~~--~~~--~~~~~~~~~~~ 1104 (1142)
++|++||..... ......+...........+.......... .... .. ... ...........
T Consensus 210 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (317)
T cd07868 210 LTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSK 289 (317)
T ss_pred HhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChH
Confidence 999999964321 11122221111111111111110000000 0000 00 000 00000122345
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001142 1105 LVDVFRRCTEENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1105 L~dLI~~CL~~DP~~RPSa~EVL~~L~~ 1132 (1142)
+.+++.+||+.||.+|||++|+++|+|+
T Consensus 290 ~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 290 AFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 8899999999999999999999999986
No 129
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=332.70 Aligned_cols=256 Identities=21% Similarity=0.264 Sum_probs=212.9
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
-|.+.+.||+|.|.+|-+|++ .+..|||||. +++.........+ .+|++.|+-++|||||++|++.....
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKvi--DKTKlD~~st~hl----fqEVRCMKLVQHpNiVRLYEViDTQT-- 90 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVI--DKTKLDTLSTGHL----FQEVRCMKLVQHPNIVRLYEVIDTQT-- 90 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEe--cccccchhhhhHH----HHHHHHHHHhcCcCeeeeeehhcccc--
Confidence 488999999999999999986 7899999984 4444443333333 68999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.+|||+|+-++|+|++||-++ ...+.+..+++++.||+.|+.|+|+..+|||||||+||.+-+.
T Consensus 91 ------------KlyLiLELGD~GDl~DyImKH----e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEK 154 (864)
T KOG4717|consen 91 ------------KLYLILELGDGGDLFDYIMKH----EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEK 154 (864)
T ss_pred ------------eEEEEEEecCCchHHHHHHhh----hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeee
Confidence 459999999999999999873 3469999999999999999999999999999999999977554
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
- |-|||.|||++..+.... ...+.+|+..|-|||++.+. ....+++||||||||||.|..
T Consensus 155 l------GlVKLTDFGFSNkf~PG~-----------kL~TsCGSLAYSAPEILLGD---sYDAPAVDiWSLGVILyMLVC 214 (864)
T KOG4717|consen 155 L------GLVKLTDFGFSNKFQPGK-----------KLTTSCGSLAYSAPEILLGD---SYDAPAVDIWSLGVILYMLVC 214 (864)
T ss_pred c------CceEeeeccccccCCCcc-----------hhhcccchhhccCchhhhcC---ccCCcchhhhHHHHHHHHHHh
Confidence 2 889999999986554322 23456799999999999983 344589999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|++||+..+..+...+|......- +...+++.++||..||..||.+|.+.+|
T Consensus 215 Gq~PFqeANDSETLTmImDCKYtv----------------------------PshvS~eCrdLI~sMLvRdPkkRAslEe 266 (864)
T KOG4717|consen 215 GQPPFQEANDSETLTMIMDCKYTV----------------------------PSHVSKECRDLIQSMLVRDPKKRASLEE 266 (864)
T ss_pred CCCccccccchhhhhhhhcccccC----------------------------chhhhHHHHHHHHHHHhcCchhhccHHH
Confidence 999999888877777765443211 1167788999999999999999999999
Q ss_pred HHHHHHhhcC
Q 001142 1126 LYEMFVARTS 1135 (1142)
Q Consensus 1126 VL~~L~~~~s 1135 (1142)
|..+.|.+.-
T Consensus 267 I~s~~Wlq~~ 276 (864)
T KOG4717|consen 267 IVSTSWLQAG 276 (864)
T ss_pred HhccccccCC
Confidence 9999998754
No 130
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.3e-35 Score=340.47 Aligned_cols=249 Identities=25% Similarity=0.285 Sum_probs=193.2
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEecCCCCCCCC
Q 001142 815 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 815 LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
||+|+||+||+|++. +..+|+|+...+.... ..... ....|..++... .||||+++++.+.+...
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~----~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~----- 70 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVA-KKEVA----HTIGERNILVRTLLDESPFIVGLKFSFQTDSD----- 70 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhh-hhHHH----HHHHHHHHHHHhccCCCCcCcceEEEEecCCe-----
Confidence 799999999999874 6678888754221111 11111 224567777655 69999999999886553
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
.++||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 71 ---------~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~---- 132 (330)
T cd05586 71 ---------LYLVTDYMSGGELFWHLQK-----EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT---- 132 (330)
T ss_pred ---------EEEEEcCCCCChHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC----
Confidence 4999999999999998875 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||++....... .......||+.|+|||++.+ ...++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kl~Dfg~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DvwslGvil~elltG~~P 196 (330)
T cd05586 133 ---GHIALCDFGLSKANLTDN----------KTTNTFCGTTEYLAPEVLLD---EKGYTKHVDFWSLGVLVFEMCCGWSP 196 (330)
T ss_pred ---CCEEEecCCcCcCCCCCC----------CCccCccCCccccCHHHHcC---CCCCCCccceeccccEEEEeccCCCC
Confidence 789999999986432211 11123469999999999865 23478999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC----CHHH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP----TAGD 1125 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP----Sa~E 1125 (1142)
|.+....+....+..+.... +. ...++.+.+++.+||+.||.+|| ++.+
T Consensus 197 f~~~~~~~~~~~i~~~~~~~-~~--------------------------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 249 (330)
T cd05586 197 FYAEDTQQMYRNIAFGKVRF-PK--------------------------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVE 249 (330)
T ss_pred CCCCCHHHHHHHHHcCCCCC-CC--------------------------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHH
Confidence 98877666666554332110 00 02355689999999999999998 7999
Q ss_pred HHHHHHhhc
Q 001142 1126 LYEMFVART 1134 (1142)
Q Consensus 1126 VL~~L~~~~ 1134 (1142)
+++|+|+..
T Consensus 250 ll~h~~~~~ 258 (330)
T cd05586 250 LKEHPFFAD 258 (330)
T ss_pred HhcCccccC
Confidence 999999864
No 131
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=5.6e-35 Score=323.89 Aligned_cols=251 Identities=29% Similarity=0.492 Sum_probs=194.1
Q ss_pred ceeeeecccCceEEEEEEEC------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFG------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
++.+.||.|+||.||+|.+. +..|+||+.. . .......+.+ .+|++.+++++||||++++|++....
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~--~-~~~~~~~~~~----~~e~~~l~~l~h~ni~~~~g~~~~~~ 74 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILK--P-SSSEEEEEEF----LNEIQILRKLRHPNIVKLYGFCIENE 74 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEES--T-TSSHHHHHHH----HHHHHHHHTHSBTTBE-EEEEEESSS
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEec--c-ccccccceee----eecccccccccccccccccccccccc
Confidence 46789999999999999997 5567777652 2 2233334555 78999999999999999999998543
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++||||+++|+|.+++... ....+++..+..|+.||+.||.|||+++|+|+||+++||+++
T Consensus 75 ~--------------~~lv~e~~~~g~L~~~L~~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~ 137 (259)
T PF07714_consen 75 P--------------LFLVMEYCPGGSLDDYLKSK---NKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD 137 (259)
T ss_dssp S--------------EEEEEE--TTEBHHHHHHHT---CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE
T ss_pred c--------------cccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccc
Confidence 2 49999999999999999872 235689999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++......... .......+...|+|||.+.. ..++.++||||||+++|||
T Consensus 138 ~~-------~~~Kl~~f~~~~~~~~~~~~--------~~~~~~~~~~~~~aPE~~~~----~~~~~ksDVysfG~~l~ei 198 (259)
T PF07714_consen 138 SN-------GQVKLSDFGLSRPISEKSKY--------KNDSSQQLPLRYLAPEVLKD----GEYTKKSDVYSFGMLLYEI 198 (259)
T ss_dssp TT-------TEEEEESTTTGEETTTSSSE--------EESTTSESGGGGS-HHHHHH----SEESHHHHHHHHHHHHHHH
T ss_pred cc-------cccccccccccccccccccc--------cccccccccccccccccccc----ccccccccccccccccccc
Confidence 87 89999999999765221111 01112346778999999876 4578999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |+.||.+....++...+..+..+..+. .++..+.+++.+||..||.+|||
T Consensus 199 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~C~~~~p~~RPs 251 (259)
T PF07714_consen 199 LTLGKFPFSDYDNEEIIEKLKQGQRLPIPD---------------------------NCPKDIYSLIQQCWSHDPEKRPS 251 (259)
T ss_dssp HTTSSGTTTTSCHHHHHHHHHTTEETTSBT---------------------------TSBHHHHHHHHHHT-SSGGGS--
T ss_pred cccccccccccccccccccccccccceecc---------------------------chhHHHHHHHHHHcCCChhhCcC
Confidence 99 789998887777777765554332221 34566899999999999999999
Q ss_pred HHHHHHHH
Q 001142 1123 AGDLYEMF 1130 (1142)
Q Consensus 1123 a~EVL~~L 1130 (1142)
+.++++.|
T Consensus 252 ~~~i~~~L 259 (259)
T PF07714_consen 252 FQEILQEL 259 (259)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcC
Confidence 99999865
No 132
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1.1e-34 Score=349.28 Aligned_cols=284 Identities=20% Similarity=0.214 Sum_probs=196.2
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC------CCCccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR------HSCIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~------HpNIVkl~g 877 (1142)
-.+|++.++||+|+||+||+|.+ .+..||+|+.+... .....+ ..|+.++..++ |++|+++++
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~~----~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRDA----KIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHHH----HHHHHHHHHHhhcCcccCcceeeeEE
Confidence 36799999999999999999987 45668888754211 111122 45666666654 456888888
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIK 956 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLK 956 (1142)
++.... .+.++|||++ +++|.+++.+ ...+++..+..|+.||+.||+|||+ .||||||||
T Consensus 199 ~~~~~~-------------~~~~iv~~~~-g~~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlK 259 (467)
T PTZ00284 199 YFQNET-------------GHMCIVMPKY-GPCLLDWIMK-----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLK 259 (467)
T ss_pred EEEcCC-------------ceEEEEEecc-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCC
Confidence 876432 2469999998 6899998875 2468999999999999999999998 599999999
Q ss_pred CCCeeecccccc---------CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC
Q 001142 957 SENILIDLERKK---------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1027 (1142)
Q Consensus 957 p~NILld~~~~~---------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1027 (1142)
|+|||++.++.. ......+||+|||.+..... ......||+.|+|||++.+ ..|
T Consensus 260 P~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-------------~~~~~~gt~~Y~APE~~~~----~~~ 322 (467)
T PTZ00284 260 PENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-------------SRTAIVSTRHYRSPEVVLG----LGW 322 (467)
T ss_pred HHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc-------------ccccccCCccccCcHHhhc----CCC
Confidence 999999765210 00123699999998753211 1124579999999999976 568
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccc-cccccc----CCC----------C
Q 001142 1028 GLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE-HEVAQS----GSG----------F 1092 (1142)
Q Consensus 1028 s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~-~~~~~~----~~~----------~ 1092 (1142)
+.++|||||||++|||++|+.||.+.+..+....+...... ++..+........ ..+... ... .
T Consensus 323 ~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (467)
T PTZ00284 323 MYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGR-LPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIAR 401 (467)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCC-CCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhc
Confidence 89999999999999999999999887766555444322111 1111110000000 000000 000 0
Q ss_pred CCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1093 EKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1093 ~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
..........+.+.+||.+||++||++|||++|+++|+|+...
T Consensus 402 ~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~ 444 (467)
T PTZ00284 402 ARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKY 444 (467)
T ss_pred ccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCcccccc
Confidence 0000111234568899999999999999999999999999864
No 133
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=2.3e-34 Score=321.20 Aligned_cols=264 Identities=23% Similarity=0.387 Sum_probs=199.8
Q ss_pred CCCcceeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
.++|.+.+.||+|++|.||+|.+.. ..+.++++....... ......+ .+|+.++++++|+||+++++++.
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~ 79 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDF----LMEALIMSKFNHQNIVRLIGVSF 79 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHH----HHHHHHHHhCCCCCEeeEEEEEc
Confidence 4568999999999999999999855 444555544433221 2222334 78999999999999999999887
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~--~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
+... .++||||+++++|.+++...... ....+++..+..++.||+.||+|||+++++||||||+
T Consensus 80 ~~~~--------------~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~ 145 (277)
T cd05036 80 ERLP--------------RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAAR 145 (277)
T ss_pred cCCC--------------cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchh
Confidence 6543 38999999999999999764211 1135899999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
||+++.++ ....+||+|||+++........ ........+..|+|||++.+ ..++.++|||||||
T Consensus 146 nil~~~~~----~~~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~DiwslG~ 209 (277)
T cd05036 146 NCLLTCKG----PGRVAKIADFGMARDIYRASYY--------RKGGRAMLPIKWMPPEAFLD----GIFTSKTDVWSFGV 209 (277)
T ss_pred eEEEeccC----CCcceEeccCccccccCCccce--------ecCCCCCccHhhCCHHHHhc----CCcCchhHHHHHHH
Confidence 99997642 1146999999999765321110 00112234567999999875 56889999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
++|||++ |..||.+....+....+.....+..+ ...+..+.+++.+||+.+|
T Consensus 210 il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~cl~~~p 262 (277)
T cd05036 210 LLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPP---------------------------KGCPGPVYRIMTDCWQHTP 262 (277)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHcCCCc
Confidence 9999997 99999877666655555433221111 1345678999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 001142 1118 TERPTAGDLYEMFV 1131 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~ 1131 (1142)
++|||+.+|++++.
T Consensus 263 ~~Rps~~~vl~~l~ 276 (277)
T cd05036 263 EDRPNFATILERIQ 276 (277)
T ss_pred ccCcCHHHHHHHhh
Confidence 99999999999874
No 134
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=7.7e-35 Score=325.07 Aligned_cols=262 Identities=29% Similarity=0.487 Sum_probs=206.7
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||.||+|.+. +..+++|+.... .....+.+ .+|+.++++++||||+++++++....
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE----SEEELEDF----MVEIDILSECKHPNIVGLYEAYFYEN 75 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC----CHHHHHHH----HHHHHHHHhCCCCceeEEEEEEecCC
Confidence 457999999999999999999984 566777775432 22333444 78999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++... ...+++..+..++.|++.||.|||++||+|+||||+||+++
T Consensus 76 --------------~~~lv~e~~~~~~L~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~ 137 (280)
T cd06611 76 --------------KLWILIEFCDGGALDSIMLEL----ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT 137 (280)
T ss_pred --------------eEEEEeeccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC
Confidence 349999999999999998752 24689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL~E 1042 (1142)
.+ +.++|+|||.+........ ......+++.|+|||.+.... ....++.++||||||+++|+
T Consensus 138 ~~-------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~ 200 (280)
T cd06611 138 LD-------GDVKLADFGVSAKNKSTLQ----------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIE 200 (280)
T ss_pred CC-------CCEEEccCccchhhccccc----------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHH
Confidence 77 7899999998865432111 112345889999999986321 23457789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|+.||......+....+..+..+.+.. ....+..+.+++.+||+.+|.+||+
T Consensus 201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~~p~~Rps 255 (280)
T cd06611 201 LAQMEPPHHELNPMRVLLKILKSEPPTLDQ-------------------------PSKWSSSFNDFLKSCLVKDPDDRPT 255 (280)
T ss_pred HHhCCCCcccCCHHHHHHHHhcCCCCCcCC-------------------------cccCCHHHHHHHHHHhccChhhCcC
Confidence 999999998766655544444333221110 0134556899999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001142 1123 AGDLYEMFVARTS 1135 (1142)
Q Consensus 1123 a~EVL~~L~~~~s 1135 (1142)
+.++++|+|+...
T Consensus 256 ~~~il~~~~~~~~ 268 (280)
T cd06611 256 AAELLKHPFVSDQ 268 (280)
T ss_pred HHHHhcChhhccc
Confidence 9999999999764
No 135
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.7e-34 Score=321.97 Aligned_cols=258 Identities=21% Similarity=0.359 Sum_probs=197.9
Q ss_pred CCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
++|++.+.||+|+||.||+|.+.+ ..+|+|+.. .. .......++ .+|+.+++.++||||+++++++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~--~~-~~~~~~~~~----~~e~~~l~~l~~~~iv~~~~~~ 78 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVN--EA-ASMRERIEF----LNEASVMKEFNCHHVVRLLGVV 78 (277)
T ss_pred HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecc--cc-CCHHHHHHH----HHHHHHHHhCCCCCeeeEEEEE
Confidence 468999999999999999998642 346666532 21 112222333 7899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG-----EKHVSVKLALFIAQDVAAALVELHSKHIMHRD 954 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~-----~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrD 954 (1142)
.+.. +.++||||+++++|.++++...... ...+++..+..++.|++.||.|||+.|++|||
T Consensus 79 ~~~~--------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~d 144 (277)
T cd05062 79 SQGQ--------------PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRD 144 (277)
T ss_pred cCCC--------------CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 7544 3499999999999999997632210 13467889999999999999999999999999
Q ss_pred CCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHH
Q 001142 955 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIW 1034 (1142)
Q Consensus 955 LKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVw 1034 (1142)
|||+||+++.+ +.++|+|||++.......... ......+++.|+|||++.+ ..++.++|||
T Consensus 145 lkp~Nil~~~~-------~~~~l~dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~ 205 (277)
T cd05062 145 LAARNCMVAED-------FTVKIGDFGMTRDIYETDYYR--------KGGKGLLPVRWMSPESLKD----GVFTTYSDVW 205 (277)
T ss_pred cchheEEEcCC-------CCEEECCCCCccccCCcceee--------cCCCCccCHhhcChhHhhc----CCcCchhHHH
Confidence 99999999977 789999999987543211100 1112345778999999875 5678999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1035 SYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1035 SLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
||||++|||++ |..||.+....+....+.....+..+ ...+..+.+++.+||
T Consensus 206 slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l 258 (277)
T cd05062 206 SFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKP---------------------------DNCPDMLFELMRMCW 258 (277)
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHc
Confidence 99999999999 78999887766666555443322111 134556899999999
Q ss_pred ccCCCCCCCHHHHHHHHH
Q 001142 1114 EENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~ 1131 (1142)
+.||++|||+.|+++++.
T Consensus 259 ~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 259 QYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCChhhCcCHHHHHHHhh
Confidence 999999999999999864
No 136
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.4e-34 Score=319.08 Aligned_cols=259 Identities=28% Similarity=0.437 Sum_probs=200.3
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|++|.||+|.. .+..+++|+...... ....... ...+.+|+.++++++||||+++++++.+..
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~--~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPD--SPETKKE-VNALECEIQLLKNLQHERIVQYYGCLRDDE- 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeeccc--chhhHHH-HHHHHHHHHHHHhCCCCCeeeeEEEEccCC-
Confidence 4689999999999999999986 467788887543321 1111111 123478999999999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++.
T Consensus 78 -------------~~~~v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~ 139 (263)
T cd06625 78 -------------TLSIFMEYMPGGSVKDQLKA-----YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDS 139 (263)
T ss_pred -------------eEEEEEEECCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence 45999999999999999876 245889999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||.+......... ........++..|+|||++.+ ..++.++||||||+++|+|+
T Consensus 140 ~-------~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~el~ 201 (263)
T cd06625 140 A-------GNVKLGDFGASKRLQTICSS-------GTGMKSVTGTPYWMSPEVISG----EGYGRKADVWSVGCTVVEML 201 (263)
T ss_pred C-------CCEEEeecccceeccccccc-------cccccCCCcCccccCcceecc----CCCCchhhhHHHHHHHHHHH
Confidence 7 78999999998754332111 001123457889999999876 45789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+|+.||...........+... ..+.. ....+..+.+++.+||..+|.+|||+
T Consensus 202 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~l~~~p~~Rpt~ 254 (263)
T cd06625 202 TEKPPWAEFEAMAAIFKIATQPTNPQL---------------------------PSHVSPDARNFLRRTFVENAKKRPSA 254 (263)
T ss_pred hCCCCccccchHHHHHHHhccCCCCCC---------------------------CccCCHHHHHHHHHHhhcCcccCCCH
Confidence 999999765444333222211 11110 01345668999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.++++|+|+
T Consensus 255 ~~ll~~~~~ 263 (263)
T cd06625 255 EELLRHFFV 263 (263)
T ss_pred HHHhhCCCC
Confidence 999999986
No 137
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.7e-34 Score=361.48 Aligned_cols=273 Identities=20% Similarity=0.331 Sum_probs=205.4
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+..+.+|++.++||+|+||+||+|++. +..+++|+.... .........+ ..|+.++++++|||||+++++|.
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~--~l~e~~~~~~----~~EI~IL~~L~HPNIVrl~d~f~ 82 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYR--GLKEREKSQL----VIEVNVMRELKHKNIVRYIDRFL 82 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecc--ccCHHHHHHH----HHHHHHHHHcCCCCcCeEEEEEE
Confidence 344678999999999999999999984 445677765433 2223333333 78999999999999999999886
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-------Ccccc
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-------HIMHR 953 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-------gIvHr 953 (1142)
.... ..+||||||+++++|.++|...... ...+++..++.|+.||+.||.|||+. +||||
T Consensus 83 de~~------------~~lyIVMEY~~gGSL~~lL~k~~~~-~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHR 149 (1021)
T PTZ00266 83 NKAN------------QKLYILMEFCDAGDLSRNIQKCYKM-FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHR 149 (1021)
T ss_pred ecCC------------CEEEEEEeCCCCCcHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceec
Confidence 5321 2469999999999999999764332 24699999999999999999999984 59999
Q ss_pred CCCCCCeeeccccc----------cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001142 954 DIKSENILIDLERK----------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1023 (1142)
Q Consensus 954 DLKp~NILld~~~~----------~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1023 (1142)
||||+||||+.... .......+||+|||++..+.... ......||+.|+|||++.+.
T Consensus 150 DLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-----------~~~s~vGTp~YmAPEvL~ge-- 216 (1021)
T PTZ00266 150 DLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES-----------MAHSCVGTPYYWSPELLLHE-- 216 (1021)
T ss_pred cCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc-----------cccccCCCccccCHHHHhcc--
Confidence 99999999965311 01223569999999997543211 11245699999999998652
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhH
Q 001142 1024 PNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1102 (1142)
Q Consensus 1024 ~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1142)
...++.++|||||||+||+|++|+.||....... +...+........ ...+
T Consensus 217 ~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi----------------------------~~~S 268 (1021)
T PTZ00266 217 TKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPI----------------------------KGKS 268 (1021)
T ss_pred CCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCc----------------------------CCCC
Confidence 2457899999999999999999999997644332 3333222211000 0335
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1103 SFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1103 ~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
..+.+||..||+.+|.+||++.|++.|+|+...
T Consensus 269 ~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 269 KELNILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred HHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 679999999999999999999999999998743
No 138
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.8e-35 Score=322.29 Aligned_cols=258 Identities=32% Similarity=0.443 Sum_probs=197.7
Q ss_pred cceeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|++.+.||+|+||+||+++.... .+|+|+..... ....... ...+|+.++++++||||+++++++.+..
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~----~~~~e~~~~~~l~~~~i~~~~~~~~~~~--- 71 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSE--IEEEERE----ENIREIKILRRLRHPNIVQILDVFQDDN--- 71 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTT--HHHHHHH----HHHHHHHHHHHHTBTTBCHEEEEEEESS---
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccc--ccccccc----hhhhhhhccccccccccccccccccccc---
Confidence 78999999999999999999544 58888865331 1111111 1246999999999999999999998755
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+||+++.+
T Consensus 72 -----------~~~~v~~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~- 134 (260)
T PF00069_consen 72 -----------YLYIVMEYCPGGSLQDYLQK-----NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDEN- 134 (260)
T ss_dssp -----------EEEEEEEEETTEBHHHHHHH-----HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTT-
T ss_pred -----------cccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccc-
Confidence 34899999998899999983 2468999999999999999999999999999999999999977
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++|+|||.+....... .......++..|+|||++.. ...++.++||||+|+++|+|++|
T Consensus 135 ------~~~~l~Dfg~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l~~~ 195 (260)
T PF00069_consen 135 ------GEVKLIDFGSSVKLSENN----------ENFNPFVGTPEYMAPEVLQQ---GKKYTRKSDIWSLGIILYELLTG 195 (260)
T ss_dssp ------SEEEESSGTTTEESTSTT----------SEBSSSSSSGGGSCHHHHTT---TSSBSTHHHHHHHHHHHHHHHHS
T ss_pred ------cccccccccccccccccc----------cccccccccccccccccccc---ccccccccccccccccccccccc
Confidence 789999999987531111 11123468999999999872 25678999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
..||...........+............. ........+.+++.+||+.||++||++.++
T Consensus 196 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~l~~li~~~l~~~p~~R~~~~~l 254 (260)
T PF00069_consen 196 KLPFEESNSDDQLEIIEKILKRPLPSSSQ---------------------QSREKSEELRDLIKKMLSKDPEQRPSAEEL 254 (260)
T ss_dssp SSSSTTSSHHHHHHHHHHHHHTHHHHHTT---------------------SHTTSHHHHHHHHHHHSSSSGGGSTTHHHH
T ss_pred ccccccccchhhhhhhhhccccccccccc---------------------ccchhHHHHHHHHHHHccCChhHCcCHHHH
Confidence 99998763333333222111111100000 000223679999999999999999999999
Q ss_pred HHHHHh
Q 001142 1127 YEMFVA 1132 (1142)
Q Consensus 1127 L~~L~~ 1132 (1142)
++|+|+
T Consensus 255 ~~~~~~ 260 (260)
T PF00069_consen 255 LKHPWF 260 (260)
T ss_dssp HTSGGG
T ss_pred hcCCCC
Confidence 999996
No 139
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.5e-34 Score=322.15 Aligned_cols=259 Identities=24% Similarity=0.387 Sum_probs=202.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
..+|.+.+.||+|+||.||+|.+. ...+|+|+.... ......+.+ .+|++++++++||||++++++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~ 76 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKET---ASNDARKDF----EREAELLTNFQHENIVKFYGV 76 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeeccc---CCHHHHHHH----HHHHHHHHhcCCCCchheeeE
Confidence 356899999999999999999863 245777765322 112223344 799999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHh---------ccCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLS---------ETGEKHVSVKLALFIAQDVAAALVELHSKH 949 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~---------~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g 949 (1142)
+.... ..++||||+++++|.+++.... ......+++..+..++.|++.||.|||++|
T Consensus 77 ~~~~~--------------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 142 (280)
T cd05049 77 CTEGD--------------PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH 142 (280)
T ss_pred EecCC--------------CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC
Confidence 88654 3499999999999999997632 112245789999999999999999999999
Q ss_pred ccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001142 950 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1029 (1142)
Q Consensus 950 IvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1029 (1142)
|+||||||+||+++.+ +.++|+|||.+......... .......+++.|+|||++.+ ..++.
T Consensus 143 i~h~dlkp~nili~~~-------~~~kl~d~g~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~ 203 (280)
T cd05049 143 FVHRDLATRNCLVGYD-------LVVKIGDFGMSRDVYTTDYY--------RVGGHTMLPIRWMPPESIMY----RKFTT 203 (280)
T ss_pred eeccccccceEEEcCC-------CeEEECCcccceecccCcce--------ecCCCCcccceecChhhhcc----CCcch
Confidence 9999999999999887 78999999998654221100 01123346788999999876 56889
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHH
Q 001142 1030 EVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1108 (1142)
Q Consensus 1030 ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1108 (1142)
++|||||||++|||++ |..||.+....+....+..+..+..+ ...+..+.++
T Consensus 204 ~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l 256 (280)
T cd05049 204 ESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRP---------------------------RTCPSEVYDI 256 (280)
T ss_pred hhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHH
Confidence 9999999999999998 99999877766666665543322111 1345679999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHH
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~ 1131 (1142)
+.+||+.||++||++.||++.+.
T Consensus 257 i~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 257 MLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHcCCCcccCCCHHHHHHHhh
Confidence 99999999999999999998763
No 140
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.9e-34 Score=322.50 Aligned_cols=262 Identities=24% Similarity=0.374 Sum_probs=201.7
Q ss_pred CCCcceeeeecccCceEEEEEEE-----CCcc--EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF-----GSAD--AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~-----~~~~--vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
..+|.+.+.||+|+||.||++.. .... +++|. +... .....+.+ .+|+.++++++||||++++++
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~--~~~~--~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~ 75 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKT--LKDA--SDNARKDF----HREAELLTNLQHEHIVKFYGV 75 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEe--cCCc--CHHHHHHH----HHHHHHHHhCCCCCcceEEEE
Confidence 35789999999999999999975 2223 44544 3321 22223334 789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc--------cCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE--------TGEKHVSVKLALFIAQDVAAALVELHSKHI 950 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~--------~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gI 950 (1142)
+...+. .++||||+++++|.+++..... .....+++..+..++.||+.||+|||++||
T Consensus 76 ~~~~~~--------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i 141 (288)
T cd05093 76 CVEGDP--------------LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHF 141 (288)
T ss_pred EecCCc--------------cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 876543 4999999999999999975321 112358999999999999999999999999
Q ss_pred cccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCch
Q 001142 951 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLE 1030 (1142)
Q Consensus 951 vHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~k 1030 (1142)
+||||||+|||++.+ +.++|+|||.+......... .......+++.|+|||++.+ ..++.+
T Consensus 142 ~H~dlkp~Nili~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~ 202 (288)
T cd05093 142 VHRDLATRNCLVGEN-------LLVKIGDFGMSRDVYSTDYY--------RVGGHTMLPIRWMPPESIMY----RKFTTE 202 (288)
T ss_pred eecccCcceEEEccC-------CcEEeccCCccccccCCcee--------ecCCCCCccccccCHHHhcc----CCCCch
Confidence 999999999999877 78999999998754321110 01112346788999999875 567899
Q ss_pred hhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHH
Q 001142 1031 VDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF 1109 (1142)
Q Consensus 1031 sDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI 1109 (1142)
+|||||||++|+|++ |..||......+....+..+..+..+. ..+..+.+|+
T Consensus 203 sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li 255 (288)
T cd05093 203 SDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPR---------------------------TCPKEVYDLM 255 (288)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCC---------------------------CCCHHHHHHH
Confidence 999999999999998 999998777666666665543222110 3345699999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1110 RRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1110 ~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
.+||+.||.+|||+.++++.+.....
T Consensus 256 ~~~l~~~p~~Rpt~~~v~~~l~~~~~ 281 (288)
T cd05093 256 LGCWQREPHMRLNIKEIHSLLQNLAK 281 (288)
T ss_pred HHHccCChhhCCCHHHHHHHHHHHHH
Confidence 99999999999999999887766543
No 141
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.2e-34 Score=323.68 Aligned_cols=280 Identities=21% Similarity=0.262 Sum_probs=199.4
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|++|.||+|+. .+..+++|+...... .....+. +.+|+.++++++||||+++++++.++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 72 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESE--EEGVPST----AIREISLLKELQHPNIVCLQDVLMQES-- 72 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccc--cCCchHH----HHHHHHHHHhcCCCCEeeeEEEEeeCC--
Confidence 588999999999999999987 466788887543321 1111122 368999999999999999999988654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||++ ++|.+++.... ....+++..+..++.||+.||+|||++||+||||||+||+++.+
T Consensus 73 ------------~~~~v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~ 137 (285)
T cd07861 73 ------------RLYLIFEFLS-MDLKKYLDSLP--KGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNK 137 (285)
T ss_pred ------------eEEEEEecCC-CCHHHHHhcCC--CCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCC
Confidence 3499999997 78988886522 22468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++........ ......+++.|+|||++.+ ...++.++|||||||++|+|++
T Consensus 138 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~il~~l~t 197 (285)
T cd07861 138 -------GVIKLADFGLARAFGIPVR----------VYTHEVVTLWYRAPEVLLG---SPRYSTPVDIWSIGTIFAEMAT 197 (285)
T ss_pred -------CcEEECcccceeecCCCcc----------cccCCcccccccChHHhcC---CCCcCcHHHHHHHHHHHHHHHH
Confidence 7899999999865432111 1112357889999999865 2356789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccccc--ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1046 LQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHE--HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|+.||.+.........+ .....+ ....+........ ..+... ............++++.++|.+||+.||.+|||
T Consensus 198 g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt 275 (285)
T cd07861 198 KKPLFHGDSEIDQLFRIFRILGTP-TEDVWPGVTSLPDYKNTFPKW-KKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS 275 (285)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCC-ChhhhhcchhhHHHHhhcccc-CcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC
Confidence 99999876554433222 211111 1111100000000 000000 000000011135677899999999999999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
+.+|++|+|+
T Consensus 276 ~~~ll~~~~~ 285 (285)
T cd07861 276 AKKALNHPYF 285 (285)
T ss_pred HHHHhcCCCC
Confidence 9999999985
No 142
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.4e-34 Score=316.04 Aligned_cols=258 Identities=28% Similarity=0.420 Sum_probs=203.8
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||.|+||.||+|.+. +..+++|+... ........+.+ ..|+.++++++||||+++++++....
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDY--GNMTEKEKQQL----VSEVNILRELKHPNIVRYYDRIIDRS-- 72 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEec--ccCCHHHHHHH----HHHHHHHHhcCCCccceeeeeeecCC--
Confidence 4889999999999999999874 45566666432 22233333333 78999999999999999999876432
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH-----hCCccccCCCCCCe
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH-----SKHIMHRDIKSENI 960 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLH-----s~gIvHrDLKp~NI 960 (1142)
....+++|||+++++|.+++..... ....+++..++.++.||+.||.||| +.+|+|+||||+||
T Consensus 73 ----------~~~~~~~~e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~ni 141 (265)
T cd08217 73 ----------NQTLYIVMEYCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANI 141 (265)
T ss_pred ----------CCEEEEEehhccCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHE
Confidence 1246999999999999999976432 2357899999999999999999999 89999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+++.+ +.+||+|||.+......... .....+++.|+|||++.. ..++.++||||||+++
T Consensus 142 li~~~-------~~~kl~d~g~~~~~~~~~~~----------~~~~~~~~~~~~pE~~~~----~~~~~~~Dv~slG~il 200 (265)
T cd08217 142 FLDAN-------NNVKLGDFGLAKILGHDSSF----------AKTYVGTPYYMSPEQLNH----MSYDEKSDIWSLGCLI 200 (265)
T ss_pred EEecC-------CCEEEecccccccccCCccc----------ccccccCCCccChhhhcC----CCCCchhHHHHHHHHH
Confidence 99877 78999999999765432110 112358899999999875 4578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|+.||......+..+.+..+..+.++. ..+..+.+++.+||+.+|++|
T Consensus 201 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~~l~~~p~~R 253 (265)
T cd08217 201 YELCALSPPFTARNQLQLASKIKEGKFRRIPY---------------------------RYSSELNEVIKSMLNVDPDKR 253 (265)
T ss_pred HHHHHCCCcccCcCHHHHHHHHhcCCCCCCcc---------------------------ccCHHHHHHHHHHccCCcccC
Confidence 99999999998776655555554443322211 345678999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001142 1121 PTAGDLYEMFVA 1132 (1142)
Q Consensus 1121 PSa~EVL~~L~~ 1132 (1142)
|++.+|++|+|.
T Consensus 254 p~~~~il~~~~~ 265 (265)
T cd08217 254 PSTEELLQLPLI 265 (265)
T ss_pred CCHHHHhhCCCC
Confidence 999999999873
No 143
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.8e-34 Score=318.14 Aligned_cols=256 Identities=22% Similarity=0.355 Sum_probs=200.5
Q ss_pred CCCcceeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
.++|++.+.||+|+||+||+|.+.. ..+++|+.. ... .......+ .+|+.++++++||||+++++++.
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~--~~~-~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~ 75 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLK--AGS-SDKQRLDF----LTEASIMGQFDHPNIIRLEGVVT 75 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcC--CCC-ChHHHHHH----HHHHHHHHhCCCCCcceEeEEEe
Confidence 4578999999999999999999842 346666543 221 22223334 78999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+. .++||||+++++|.+++... ...+++..+..++.|++.||.|||+++|+||||||+||
T Consensus 76 ~~~~--------------~~iv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~ni 137 (266)
T cd05033 76 KSRP--------------VMIITEYMENGSLDKFLREN----DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNI 137 (266)
T ss_pred cCCc--------------eEEEEEcCCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceE
Confidence 6543 49999999999999998752 23689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+++.+ +.++|+|||++.......... ......++..|+|||.+.+ ..++.++||||||+++
T Consensus 138 li~~~-------~~~~l~dfg~~~~~~~~~~~~--------~~~~~~~~~~y~~Pe~~~~----~~~~~~~Dv~slG~~l 198 (266)
T cd05033 138 LVNSN-------LVCKVSDFGLSRRLEDSEATY--------TTKGGKIPIRWTAPEAIAY----RKFTSASDVWSFGIVM 198 (266)
T ss_pred EEcCC-------CCEEECccchhhcccccccce--------eccCCCCCccccChhhhcc----CCCccccchHHHHHHH
Confidence 99887 789999999998764211110 0112235678999999875 4678999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+|++ |..||......+....+........+ ...++.+.+++.+||+.+|++
T Consensus 199 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~~p~~ 251 (266)
T cd05033 199 WEVMSYGERPYWDMSNQDVIKAVEDGYRLPPP---------------------------MDCPSALYQLMLDCWQKDRNE 251 (266)
T ss_pred HHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcCCCccc
Confidence 99998 99999877666666665443221111 134567899999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001142 1120 RPTAGDLYEMFVA 1132 (1142)
Q Consensus 1120 RPSa~EVL~~L~~ 1132 (1142)
||++.||++++..
T Consensus 252 Rp~~~ei~~~l~~ 264 (266)
T cd05033 252 RPTFSQIVSTLDK 264 (266)
T ss_pred CcCHHHHHHHHHh
Confidence 9999999998864
No 144
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.4e-34 Score=317.39 Aligned_cols=264 Identities=22% Similarity=0.363 Sum_probs=202.3
Q ss_pred cceeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~-----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
|.+.+.||+|+||.||+|.+.. ..+|+|+.+.+ .........+ .+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLD--IHTYSEIEEF----LSEAACMKDFDHPNVMKLIGVCFEAS 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccC--cCCHHHHHHH----HHHHHHHHhCCCCCeeeEEeeeccCC
Confidence 5788999999999999998732 45777775432 2223333344 78999999999999999999876543
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
.. ......++||||+++++|..++..... .....+++..+..++.|++.||.|||+++|+||||||+||++
T Consensus 75 ~~--------~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~ 146 (273)
T cd05035 75 SL--------QKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML 146 (273)
T ss_pred cc--------ccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE
Confidence 21 122346999999999999999865321 123468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||.++........ .......++..|+|||++.. ..++.++|||||||++||
T Consensus 147 ~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~----~~~~~~~Dv~SlG~il~e 207 (273)
T cd05035 147 RED-------MTVCVADFGLSKKIYSGDYY--------RQGRIAKMPVKWIAIESLAD----RVYTSKSDVWAFGVTMWE 207 (273)
T ss_pred CCC-------CeEEECCccceeeccccccc--------cccccccCCccccCHhhccc----CCCCcccchHHHHHHHHH
Confidence 877 78999999999765332110 01112235678999999865 567899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++ |..||.+....+..+.+..+..+..+ ...+..+.+++.+||+.||.+||
T Consensus 208 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp 260 (273)
T cd05035 208 IATRGQTPYPGVENHEIYDYLRHGNRLKQP---------------------------EDCLDELYDLMYSCWRADPKDRP 260 (273)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------cCCCHHHHHHHHHHcCCChhhCc
Confidence 999 89999887766666665544332211 13456799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001142 1122 TAGDLYEMFVA 1132 (1142)
Q Consensus 1122 Sa~EVL~~L~~ 1132 (1142)
|+.|+++++..
T Consensus 261 ~~~e~~~~l~~ 271 (273)
T cd05035 261 TFTKLREVLEN 271 (273)
T ss_pred CHHHHHHHHHh
Confidence 99999998754
No 145
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=2.7e-34 Score=316.37 Aligned_cols=249 Identities=25% Similarity=0.399 Sum_probs=199.9
Q ss_pred CCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
..+|++.+.||+|+||.||++...+..+++|..+.. ...+.+ .+|+.++++++|+||+++++++...+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~------~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND------ATAQAF----LAEASVMTQLRHSNLVQLLGVIVEEK-- 72 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCC------chHHHH----HHHHHHHHhCCCCCeeeEEEEEEcCC--
Confidence 457899999999999999999999999999875321 122333 78999999999999999999865432
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
...++||||+++++|.++++. .....+++..+..++.||+.||+|||++||+||||||+||+++.+
T Consensus 73 -----------~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~ 138 (256)
T cd05082 73 -----------GGLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSED 138 (256)
T ss_pred -----------CceEEEEECCCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCC
Confidence 135999999999999999875 223458899999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||++....... ....++..|+|||++.. ..++.++|||||||++|+|++
T Consensus 139 -------~~~kl~dfg~~~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~i~~~l~~ 194 (256)
T cd05082 139 -------NVAKVSDFGLTKEASSTQ-------------DTGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEIYS 194 (256)
T ss_pred -------CcEEecCCccceeccccC-------------CCCccceeecCHHHHcc----CCCCchhhhHHHHHHHHHHHh
Confidence 789999999986533211 12234567999999865 567899999999999999997
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|+.||......+....+..+..+..+ ...++.+.+++.+||+.+|++|||+.
T Consensus 195 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rpt~~ 247 (256)
T cd05082 195 FGRVPYPRIPLKDVVPRVEKGYKMDAP---------------------------DGCPPVVYDVMKQCWHLDAATRPSFL 247 (256)
T ss_pred CCCCCCCCCCHHHHHHHHhcCCCCCCC---------------------------CCCCHHHHHHHHHHhcCChhhCcCHH
Confidence 99999876666655555443222111 14456789999999999999999999
Q ss_pred HHHHHHH
Q 001142 1125 DLYEMFV 1131 (1142)
Q Consensus 1125 EVL~~L~ 1131 (1142)
++++++.
T Consensus 248 ~l~~~l~ 254 (256)
T cd05082 248 QLREQLE 254 (256)
T ss_pred HHHHHHh
Confidence 9998775
No 146
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.2e-34 Score=317.97 Aligned_cols=251 Identities=25% Similarity=0.351 Sum_probs=198.0
Q ss_pred CCCcceeeeecccCceEEEEEEECCc-cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSA-DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~-~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..+|++.+.||+|+||+||+|++.+. .+|+|..+ ..... ...+ .+|+.++++++||||+++++++.+...
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~--~~~~~---~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~ 73 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMS---EDEF----IEEAKVMMKLSHEKLVQLYGVCTKQRP 73 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecCCCcEEEEEcC--CCccc---HHHH----HHHHHHHhcCCCCCeeeEEEEEccCCC
Confidence 45789999999999999999998544 47777643 21111 2234 789999999999999999999876543
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||+++++|.+++... ...+++..+..++.||+.||.|||+.||+|+||||+||+++.
T Consensus 74 --------------~~lv~e~~~~~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~ 135 (256)
T cd05113 74 --------------IYIVTEYMSNGCLLNYLREH----GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD 135 (256)
T ss_pred --------------cEEEEEcCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC
Confidence 39999999999999998752 236899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||.++........ ......++..|+|||.+.+ ..++.++|||||||++|+|+
T Consensus 136 ~-------~~~kl~d~g~~~~~~~~~~~---------~~~~~~~~~~y~~pe~~~~----~~~~~~~Di~slG~~l~~l~ 195 (256)
T cd05113 136 Q-------GCVKVSDFGLSRYVLDDEYT---------SSVGSKFPVRWSPPEVLLY----SKFSSKSDVWAFGVLMWEVY 195 (256)
T ss_pred C-------CCEEECCCccceecCCCcee---------ecCCCccChhhCCHHHHhc----CcccchhHHHHHHHHHHHHh
Confidence 7 78999999998754321110 0112235678999999875 45789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |..||......+....+..+..+..+. ..+..+.+++.+||+.||.+||++
T Consensus 196 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~cl~~~p~~Rp~~ 248 (256)
T cd05113 196 SLGKMPYERFNNSETVEKVSQGLRLYRPH---------------------------LASEKVYAIMYSCWHEKAEERPTF 248 (256)
T ss_pred cCCCCCcCcCCHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCcccCCCH
Confidence 8 999998776666666654443221110 234568999999999999999999
Q ss_pred HHHHHHH
Q 001142 1124 GDLYEMF 1130 (1142)
Q Consensus 1124 ~EVL~~L 1130 (1142)
.++++.+
T Consensus 249 ~~ll~~~ 255 (256)
T cd05113 249 QQLLSSI 255 (256)
T ss_pred HHHHHhh
Confidence 9999875
No 147
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.5e-34 Score=320.74 Aligned_cols=262 Identities=26% Similarity=0.398 Sum_probs=198.3
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~ 884 (1142)
.|++.+.||+|+||.||+|.+. +..+|+|+.... .. ....+ .+|+.+++++ +||||+++++++.....
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--~~---~~~~~----~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GD---EEEEI----KQEINMLKKYSHHRNIATYYGAFIKKNP 77 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC--Cc---cHHHH----HHHHHHHHHhcCCCCeeeEeeEEeecCC
Confidence 5788899999999999999884 556677765432 11 11233 6899999998 69999999999875431
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.......++||||+++++|.+++.. .....+++..+..++.|++.||+|||+++|+|+||||+||+++.
T Consensus 78 --------~~~~~~~~iv~e~~~~~~L~~~l~~---~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~ 146 (272)
T cd06637 78 --------PGMDDQLWLVMEFCGAGSVTDLIKN---TKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE 146 (272)
T ss_pred --------CCCCcEEEEEEEcCCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC
Confidence 1112357999999999999999875 22346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL~EL 1043 (1142)
+ +.++|+|||++........ ......|++.|+|||++.+.. ....++.++|||||||++|||
T Consensus 147 ~-------~~~~l~Dfg~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el 209 (272)
T cd06637 147 N-------AEVKLVDFGVSAQLDRTVG----------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 209 (272)
T ss_pred C-------CCEEEccCCCceecccccc----------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHH
Confidence 7 7899999999875432111 112346899999999986421 124578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||...........+.....+.. .....+..+.+|+.+||..||.+|||+
T Consensus 210 ~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~ 263 (272)
T cd06637 210 AEGAPPLCDMHPMRALFLIPRNPAPRL--------------------------KSKKWSKKFQSFIESCLVKNHSQRPTT 263 (272)
T ss_pred HhCCCCccccCHHHHHHHHhcCCCCCC--------------------------CCCCcCHHHHHHHHHHcCCChhhCCCH
Confidence 999999976544333222211110000 001345578999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.++++|+|+
T Consensus 264 ~~il~~~~~ 272 (272)
T cd06637 264 EQLMKHPFI 272 (272)
T ss_pred HHHhhCCCC
Confidence 999999986
No 148
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.3e-35 Score=344.83 Aligned_cols=255 Identities=23% Similarity=0.381 Sum_probs=211.5
Q ss_pred ceeeeecccCceEEEEEEECCccEEEEEE--ecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFGSADAAAKVR--TLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~--~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
++..+||+|+|-+||+|.+..+.+.|+.- ++..........+.| ..|+.+|+.|+|||||++|.++.+...
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~----~~Ev~lLKsL~H~NIirfy~SW~d~~n--- 115 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERL----YSEVHLLKSLKHPNIIRFYDSWVDTDN--- 115 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHH----HHHHHHHccCCCCceeeeeeheecCCC---
Confidence 77789999999999999987666666542 222222233334444 899999999999999999999987543
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--CccccCCCCCCeeeccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--HIMHRDIKSENILIDLE 965 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~--gIvHrDLKp~NILld~~ 965 (1142)
....+|+|++..|+|..|++++ +..+.+.++.|++||++||.|||++ .|||||||.+||||+.+
T Consensus 116 ---------~~in~iTEL~TSGtLr~Y~kk~-----~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~ 181 (632)
T KOG0584|consen 116 ---------KTINFITELFTSGTLREYRKKH-----RRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN 181 (632)
T ss_pred ---------ceeeeeeecccCCcHHHHHHHh-----ccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC
Confidence 2458999999999999999884 5688999999999999999999987 69999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
. |.|||+|+|+|+...... ...+.|||.|||||++.. .|+..+||||||+.++||+|
T Consensus 182 ~------G~VKIGDLGLAtl~r~s~------------aksvIGTPEFMAPEmYEE-----~YnE~VDVYaFGMCmLEMvT 238 (632)
T KOG0584|consen 182 L------GEVKIGDLGLATLLRKSH------------AKSVIGTPEFMAPEMYEE-----NYNELVDVYAFGMCMLEMVT 238 (632)
T ss_pred c------CceeecchhHHHHhhccc------------cceeccCccccChHHHhh-----hcchhhhhhhhhHHHHHHHh
Confidence 4 899999999998765422 124689999999999874 78999999999999999999
Q ss_pred CCCCCCC-CCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 LQVPYMG-LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 G~~Pf~~-~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+.+||.. .++.+++.++..|..|..... -..+++++||.+||.. ..+|||+.
T Consensus 239 ~eYPYsEC~n~AQIYKKV~SGiKP~sl~k--------------------------V~dPevr~fIekCl~~-~~~R~sa~ 291 (632)
T KOG0584|consen 239 SEYPYSECTNPAQIYKKVTSGIKPAALSK--------------------------VKDPEVREFIEKCLAT-KSERLSAK 291 (632)
T ss_pred ccCChhhhCCHHHHHHHHHcCCCHHHhhc--------------------------cCCHHHHHHHHHHhcC-chhccCHH
Confidence 9999965 567889999988887653221 1234699999999999 89999999
Q ss_pred HHHHHHHhhcC
Q 001142 1125 DLYEMFVARTS 1135 (1142)
Q Consensus 1125 EVL~~L~~~~s 1135 (1142)
|+|+|+|+...
T Consensus 292 eLL~d~Ff~~d 302 (632)
T KOG0584|consen 292 ELLKDPFFDED 302 (632)
T ss_pred HHhhChhhccc
Confidence 99999999865
No 149
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.8e-34 Score=327.34 Aligned_cols=257 Identities=19% Similarity=0.315 Sum_probs=198.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC--Cc----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SA----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~----~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
..+|++.+.||+|+||.||+|.+. +. .+|+|+.. .. ......+++ .+|+.+++.++||||+++++++
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~--~~-~~~~~~~~~----~~e~~~l~~l~h~niv~~~g~~ 78 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EA-TSPKANKEI----LDEAYVMASVDNPHVCRLLGIC 78 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecc--cc-CCHHHHHHH----HHHHHHHHhCCCCCCCeEEEEE
Confidence 457899999999999999999873 22 25666643 21 122223333 7899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.... .++||||+++|+|.+++... ...+++..+..++.||+.||+|||++||+||||||+|
T Consensus 79 ~~~~---------------~~~v~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~N 139 (316)
T cd05108 79 LTST---------------VQLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARN 139 (316)
T ss_pred cCCC---------------ceeeeecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhh
Confidence 6532 37999999999999998752 2358899999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||+++......... ......++..|+|||++.+ ..++.++|||||||+
T Consensus 140 ill~~~-------~~~kl~DfG~a~~~~~~~~~~--------~~~~~~~~~~y~apE~~~~----~~~~~~~Di~slGv~ 200 (316)
T cd05108 140 VLVKTP-------QHVKITDFGLAKLLGADEKEY--------HAEGGKVPIKWMALESILH----RIYTHQSDVWSYGVT 200 (316)
T ss_pred eEecCC-------CcEEEccccccccccCCCcce--------eccCCccceeecChHHhcc----CCCCchhhhHHHHHH
Confidence 999877 789999999998654322110 0111234678999999875 567899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|||++ |..||.+....++...+.....+..+ ..++..+.+++.+||..||.
T Consensus 201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~cl~~~p~ 253 (316)
T cd05108 201 VWELMTFGSKPYDGIPASEISSILEKGERLPQP---------------------------PICTIDVYMIMVKCWMIDAD 253 (316)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCC---------------------------CCCCHHHHHHHHHHccCChh
Confidence 999998 99999876665554444433221111 02345688999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001142 1119 ERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ 1134 (1142)
+||++.+++.++....
T Consensus 254 ~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 254 SRPKFRELIIEFSKMA 269 (316)
T ss_pred hCcCHHHHHHHHHHHH
Confidence 9999999999877554
No 150
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=2.5e-34 Score=316.17 Aligned_cols=250 Identities=26% Similarity=0.334 Sum_probs=199.3
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.++||+|+||.||++.+ .+..+++|..+.... ....+.+ .+|+.+++.++||||+++++.+.+.+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~-- 71 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS---SSAVEDS----RKEAVLLAKMKHPNIVAFKESFEADG-- 71 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc---hHHHHHH----HHHHHHHHhCCCCCcceEEEEEEECC--
Confidence 588999999999999999987 456678887653321 2223333 68999999999999999999988655
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
+.++||||+++++|.+++.. .....+++..+..++.||+.||.|||++||+|+||||+||+++.+
T Consensus 72 ------------~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~ 136 (255)
T cd08219 72 ------------HLYIVMEYCDGGDLMQKIKL---QRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQN 136 (255)
T ss_pred ------------EEEEEEeeCCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCC
Confidence 34999999999999998865 223468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++++|||.+........ ......|++.|+|||++.+ ..++.++||||||+++|+|++
T Consensus 137 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~----~~~~~~~Dv~slG~i~~~l~~ 195 (255)
T cd08219 137 -------GKVKLGDFGSARLLTSPGA----------YACTYVGTPYYVPPEIWEN----MPYNNKSDIWSLGCILYELCT 195 (255)
T ss_pred -------CcEEEcccCcceeeccccc----------ccccccCCccccCHHHHcc----CCcCchhhhhhhchhheehhh
Confidence 7899999999865433111 1123458889999999875 457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|..||...+.......+..+.....+. ..+..+.+++.+||+.||++|||+.+
T Consensus 196 g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~P~~Rp~~~~ 248 (255)
T cd08219 196 LKHPFQANSWKNLILKVCQGSYKPLPS---------------------------HYSYELRSLIKQMFKRNPRSRPSATT 248 (255)
T ss_pred ccCCCCCCCHHHHHHHHhcCCCCCCCc---------------------------ccCHHHHHHHHHHHhCCcccCCCHHH
Confidence 999998776665555554443322211 23456899999999999999999999
Q ss_pred HHHH
Q 001142 1126 LYEM 1129 (1142)
Q Consensus 1126 VL~~ 1129 (1142)
++..
T Consensus 249 il~~ 252 (255)
T cd08219 249 ILSR 252 (255)
T ss_pred Hhhc
Confidence 9864
No 151
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.2e-34 Score=317.27 Aligned_cols=260 Identities=25% Similarity=0.406 Sum_probs=201.1
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+.+|++.++||+|+||.||+|++ .+..+|+|....... ........+ .+|+.+++.++||||+++++++.+.+
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM-MDAKARQDC----VKEIDLLKQLNHPNVIKYLDSFIEDN 75 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc-CCHHHHHHH----HHHHHHHHhCCCcceeeeeeeEEECC
Confidence 35799999999999999999987 567788886543211 122222333 78999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++..... ....+++..+..++.||+.||.|||++||+|+||||+||+++
T Consensus 76 --------------~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~ 140 (267)
T cd08228 76 --------------ELNIVLELADAGDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT 140 (267)
T ss_pred --------------eEEEEEEecCCCcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc
Confidence 34999999999999999875332 234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+........ ......|++.|+|||.+.+ ..++.++||||||+++|+|
T Consensus 141 ~~-------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~----~~~~~~~Di~slG~~l~el 199 (267)
T cd08228 141 AT-------GVVKLGDLGLGRFFSSKTT----------AAHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCLLYEM 199 (267)
T ss_pred CC-------CCEEECccccceeccchhH----------HHhcCCCCccccChhhhcc----CCCCchhhHHHHHHHHHHH
Confidence 77 7899999999876543211 0112358889999999875 4577899999999999999
Q ss_pred HhCCCCCCCCCH--HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1044 LTLQVPYMGLSE--LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1044 LtG~~Pf~~~~~--~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
++|+.||..... ......+.....+... ....+..+.+++.+||+.+|++||
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~cl~~~p~~Rp 253 (267)
T cd08228 200 AALQSPFYGDKMNLFSLCQKIEQCDYPPLP--------------------------TEHYSEKLRELVSMCIYPDPDQRP 253 (267)
T ss_pred hcCCCCCccccccHHHHHHHHhcCCCCCCC--------------------------hhhcCHHHHHHHHHHCCCCcccCc
Confidence 999999965432 2333443332222211 013456689999999999999999
Q ss_pred CHHHHHHHHHh
Q 001142 1122 TAGDLYEMFVA 1132 (1142)
Q Consensus 1122 Sa~EVL~~L~~ 1132 (1142)
++.+|++.+..
T Consensus 254 ~~~~vl~~~~~ 264 (267)
T cd08228 254 DIGYVHQIAKQ 264 (267)
T ss_pred CHHHHHHHHHH
Confidence 99999998764
No 152
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.1e-34 Score=324.12 Aligned_cols=280 Identities=21% Similarity=0.257 Sum_probs=198.0
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.++||+|+||.||+|++ .+..+++|....+.. ...... .+.+|+.++++++||||+++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~--~~~~~~----~~~~ei~~l~~l~h~~i~~~~~~~~~~~-- 72 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPS----SALREICLLKELKHKNIVRLYDVLHSDK-- 72 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccc--cccCcc----chhHHHHHHHhcCCCCeeeHHHHhccCC--
Confidence 488999999999999999998 456778877544321 111112 2368999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||++ ++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 73 ------------~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~ 135 (284)
T cd07839 73 ------------KLTLVFEYCD-QDLKKYFDSC----NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN 135 (284)
T ss_pred ------------ceEEEEecCC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCC
Confidence 3499999997 6888887641 2468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++......... .....+++.|+|||++.+ ...++.++|||||||++|+|++
T Consensus 136 -------~~~~l~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l~t 195 (284)
T cd07839 136 -------GELKLADFGLARAFGIPVRC----------YSAEVVTLWYRPPDVLFG---AKLYSTSIDMWSAGCIFAELAN 195 (284)
T ss_pred -------CcEEECccchhhccCCCCCC----------cCCCccccCCcChHHHhC---CcccCcHHHHHHHHHHHHHHHh
Confidence 78999999998754332111 112357889999999865 2356889999999999999999
Q ss_pred CCCCC-CCCCHHHHHHHHHhCCCCCchhHHhhhccccccc-ccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1046 LQVPY-MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHE-VAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1046 G~~Pf-~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
|..|| .+.+..+....+...........+.......... .................++.+.+++.+||+.||.+|||+
T Consensus 196 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~ 275 (284)
T cd07839 196 AGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISA 275 (284)
T ss_pred cCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCH
Confidence 98885 4444444444442221111111111110000000 000000000000111356788999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
+++++|+|+
T Consensus 276 ~~il~h~~f 284 (284)
T cd07839 276 EEALQHPYF 284 (284)
T ss_pred HHHhcCCCC
Confidence 999999986
No 153
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.3e-34 Score=324.08 Aligned_cols=252 Identities=22% Similarity=0.299 Sum_probs=188.7
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 815 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 815 LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
||+|+||.||+++.. +..+|+|....+..... .... .+..|++++++++||||+++++++....
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~-~~~~----~~~~E~~il~~l~hp~i~~~~~~~~~~~--------- 66 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKK-SGEK----MALLEKEILEKVNSPFIVNLAYAFESKT--------- 66 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcc-hhhH----HHHHHHHHHHhcCCCcEEEEEEEEecCC---------
Confidence 799999999999874 56677776432211111 1111 2256999999999999999999987654
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 972 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~ 972 (1142)
+.++||||+++++|.+++.. .....+++..+..++.||+.||+|||+.||+||||||+||+++.+
T Consensus 67 -----~~~lv~e~~~g~~L~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~------- 131 (277)
T cd05607 67 -----HLCLVMSLMNGGDLKYHIYN---VGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQ------- 131 (277)
T ss_pred -----eEEEEEecCCCCCHHHHHHh---ccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCC-------
Confidence 35999999999999988865 233458999999999999999999999999999999999999877
Q ss_pred CeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001142 973 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1052 (1142)
Q Consensus 973 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~ 1052 (1142)
+.++|+|||++........ .....|++.|+|||++.+ ..++.++|||||||++|||++|+.||..
T Consensus 132 ~~~~l~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 132 GNCRLSDLGLAVELKDGKT-----------ITQRAGTNGYMAPEILKE----EPYSYPVDWFAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred CCEEEeeceeeeecCCCce-----------eeccCCCCCccCHHHHcc----CCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 7899999999875432111 112358999999999876 4588999999999999999999999975
Q ss_pred CCHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH----HHHH
Q 001142 1053 LSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA----GDLY 1127 (1142)
Q Consensus 1053 ~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa----~EVL 1127 (1142)
.........+ ......... . .....++++.+++.+||+.||.+||++ .+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~--------------------~----~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 197 HKEKVAKEELKRRTLEDEVK--------------------F----EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred CcchhhHHHHHHHhhccccc--------------------c----ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 4321111111 100000000 0 001345678999999999999999999 6778
Q ss_pred HHHHhhc
Q 001142 1128 EMFVART 1134 (1142)
Q Consensus 1128 ~~L~~~~ 1134 (1142)
.|+|++.
T Consensus 253 ~h~~f~~ 259 (277)
T cd05607 253 KHEFFKT 259 (277)
T ss_pred cChhhcC
Confidence 9999864
No 154
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.7e-34 Score=322.95 Aligned_cols=263 Identities=25% Similarity=0.408 Sum_probs=202.3
Q ss_pred cceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
|++.+.||+|+||.||+|.+......++++..... .....+.+ .+|+.+++.++||||+++++++....
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~----~~e~~~l~~l~h~~ii~~~~~~~~~~----- 75 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDY----MVEIDILASCDHPNIVKLLDAFYYEN----- 75 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHH----HHHHHHHHHCCCCCeeeEEEEEeeCC-----
Confidence 68889999999999999998655444444433321 22333344 78999999999999999999987654
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
..++||||+++++|..++.. ...++++..+..++.|++.||.|||+.||+||||||+|||++.+
T Consensus 76 ---------~~~~v~e~~~~~~l~~~~~~----~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~--- 139 (282)
T cd06643 76 ---------NLWILIEFCAGGAVDAVMLE----LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLD--- 139 (282)
T ss_pred ---------EEEEEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccC---
Confidence 34999999999999988764 13468999999999999999999999999999999999999877
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccc-cCCCCCCchhhHHHHHHHHHHHHhCC
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAM-HKPNLYGLEVDIWSYGCLLLELLTLQ 1047 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~~s~ksDVwSLGviL~ELLtG~ 1047 (1142)
+.++|+|||++........ ......+++.|+|||++... .....++.++|||||||++|+|++|+
T Consensus 140 ----~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~ 205 (282)
T cd06643 140 ----GDIKLADFGVSAKNTRTIQ----------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIE 205 (282)
T ss_pred ----CCEEEcccccccccccccc----------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCC
Confidence 7899999999865432111 11234588999999998532 12345778999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 001142 1048 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY 1127 (1142)
Q Consensus 1048 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL 1127 (1142)
.||...+..+....+.....+.... +...+..+.+++.+||+.||.+||++.+++
T Consensus 206 ~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 260 (282)
T cd06643 206 PPHHELNPMRVLLKIAKSEPPTLAQ-------------------------PSRWSSEFKDFLKKCLEKNVDARWTTTQLL 260 (282)
T ss_pred CCccccCHHHHHHHHhhcCCCCCCC-------------------------ccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 9998766555444443322211110 013456799999999999999999999999
Q ss_pred HHHHhhcCCC
Q 001142 1128 EMFVARTSSS 1137 (1142)
Q Consensus 1128 ~~L~~~~ss~ 1137 (1142)
+|+|+...+.
T Consensus 261 ~~~~~~~~~~ 270 (282)
T cd06643 261 QHPFVTVNSN 270 (282)
T ss_pred cCCCEeccCC
Confidence 9999986543
No 155
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.9e-34 Score=316.38 Aligned_cols=254 Identities=26% Similarity=0.385 Sum_probs=200.8
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|+||.||+|.. .+..+++|..... .........+ .+|+.++++++||||+++++.+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~----~~e~~~l~~~~~~~i~~~~~~~~~~~-- 72 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVE--QMTKDERLAA----QNECQVLKLLSHPNIIEYYENFLEDK-- 72 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecc--ccccHHHHHH----HHHHHHHhhCCCCchhheeeeEecCC--
Confidence 488999999999999999987 4566777765432 2233333344 78999999999999999999887544
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++... ....+++..+..++.|++.||.|||++||+|+||||+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~ 137 (256)
T cd08220 73 ------------ALMIVMEYAPGGTLAEYIQKR---CNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKH 137 (256)
T ss_pred ------------EEEEEEecCCCCCHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 359999999999999999762 23458999999999999999999999999999999999999755
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
. ..++|+|||.+........ .....++..|+|||.+.+ ..++.++||||||+++|+|++
T Consensus 138 ~------~~~~l~d~~~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~~l~~l~~ 196 (256)
T cd08220 138 K------MVVKIGDFGISKILSSKSK-----------AYTVVGTPCYISPELCEG----KPYNQKSDIWALGCVLYELAS 196 (256)
T ss_pred C------CEEEEccCCCceecCCCcc-----------ccccccCCcccCchhccC----CCCCcccchHHHHHHHHHHHh
Confidence 2 5789999999976543211 113457889999999875 457789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|..||...+.......+........+ ...+..+.+++.+||+.||.+|||+.|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~p~~Rpt~~~ 249 (256)
T cd08220 197 LKRAFEAANLPALVLKIMSGTFAPIS---------------------------DRYSPDLRQLILSMLNLDPSKRPQLSQ 249 (256)
T ss_pred CCCCcccCchHHHHHHHHhcCCCCCC---------------------------CCcCHHHHHHHHHHccCChhhCCCHHH
Confidence 99999876655554444332222111 134556899999999999999999999
Q ss_pred HHHHHHh
Q 001142 1126 LYEMFVA 1132 (1142)
Q Consensus 1126 VL~~L~~ 1132 (1142)
++.|+|+
T Consensus 250 ll~~p~~ 256 (256)
T cd08220 250 IMAQPIC 256 (256)
T ss_pred HhhCCCC
Confidence 9999874
No 156
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=3.9e-34 Score=323.10 Aligned_cols=258 Identities=25% Similarity=0.414 Sum_probs=196.5
Q ss_pred CCCcceeeeecccCceEEEEEEECCc--c--EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSA--D--AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~--~--vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~ 880 (1142)
+++|++.++||+|+||.||+|.+... . +++|. ++.. ......+.+ .+|+.++.++ +||||+++++++.
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~--~~~~-~~~~~~~~~----~~E~~~l~~l~~hp~iv~~~~~~~ 73 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKM--LKEF-ASENDHRDF----AGELEVLCKLGHHPNIINLLGACE 73 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEE--cccc-CCHHHHHHH----HHHHHHHHhhcCCCchhheEEEEc
Confidence 46899999999999999999987432 2 34544 3321 122223334 7899999999 6999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVELHSKH 949 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----------~~~~ls~~~i~~Ia~qIa~gL~yLHs~g 949 (1142)
.... .++||||+++++|.+++...... ....+++..+..++.||+.||+|||++|
T Consensus 74 ~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 139 (297)
T cd05089 74 NRGY--------------LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ 139 (297)
T ss_pred cCCc--------------ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6543 39999999999999999752110 1135889999999999999999999999
Q ss_pred ccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001142 950 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1029 (1142)
Q Consensus 950 IvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1029 (1142)
|+||||||+|||++.+ +.+||+|||++........ ......+..|+|||++.+ ..++.
T Consensus 140 ivH~dlkp~Nill~~~-------~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~ 197 (297)
T cd05089 140 FIHRDLAARNVLVGEN-------LASKIADFGLSRGEEVYVK-----------KTMGRLPVRWMAIESLNY----SVYTT 197 (297)
T ss_pred cccCcCCcceEEECCC-------CeEEECCcCCCccccceec-----------cCCCCcCccccCchhhcc----CCCCc
Confidence 9999999999999877 7899999999853221100 011123457999999865 56789
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHH
Q 001142 1030 EVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1108 (1142)
Q Consensus 1030 ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1108 (1142)
++|||||||++|||++ |..||......+....+..+..+..+ ...+..+.+|
T Consensus 198 ~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l 250 (297)
T cd05089 198 KSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKP---------------------------RNCDDEVYEL 250 (297)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCC---------------------------CCCCHHHHHH
Confidence 9999999999999997 99999887776666555433221111 1345678999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
+.+||+.+|.+||+++++++.+...
T Consensus 251 i~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 251 MRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHH
Confidence 9999999999999999998886544
No 157
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-34 Score=324.81 Aligned_cols=259 Identities=25% Similarity=0.434 Sum_probs=201.4
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||.||+|.+ .+..+++|...... . ...+.+ .+|+.+++.+.||||+++++.+....
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~--~--~~~~~~----~~e~~~l~~~~h~~v~~~~~~~~~~~ 90 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--Q--PKKELI----INEILVMRENKNPNIVNYLDSYLVGD 90 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC--c--chHHHH----HHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence 35799999999999999999987 45667777654322 1 122333 68999999999999999999987644
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
+.++||||+++++|.+++.. ..+++.++..++.|++.||.|||++||+||||||+|||++
T Consensus 91 --------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~ 150 (296)
T cd06654 91 --------------ELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150 (296)
T ss_pred --------------EEEEeecccCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc
Confidence 45999999999999999864 3578999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+........ ......|++.|+|||.+.+ ..++.++|||||||++|+|
T Consensus 151 ~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~s~Gvil~~l 209 (296)
T cd06654 151 MD-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEM 209 (296)
T ss_pred CC-------CCEEECccccchhcccccc----------ccCcccCCccccCHHHHcC----CCCCccchHHHHHHHHHHH
Confidence 77 7899999999875432110 1123468899999999875 4567999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||...........+.....+... . ....+..+.+++.+||..||++|||+
T Consensus 210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~----------------------~---~~~~~~~l~~li~~~l~~~p~~Rpt~ 264 (296)
T cd06654 210 IEGEPPYLNENPLRALYLIATNGTPELQ----------------------N---PEKLSAIFRDFLNRCLDMDVEKRGSA 264 (296)
T ss_pred HhCCCCCCCCCHHHhHHHHhcCCCCCCC----------------------C---ccccCHHHHHHHHHHCcCCcccCcCH
Confidence 9999999866543322222111111100 0 01345668999999999999999999
Q ss_pred HHHHHHHHhhcCCCC
Q 001142 1124 GDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss~~ 1138 (1142)
.++++|+|+....+.
T Consensus 265 ~eil~~~~~~~~~~~ 279 (296)
T cd06654 265 KELLQHQFLKIAKPL 279 (296)
T ss_pred HHHhhChhhhccCCc
Confidence 999999999765443
No 158
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.9e-34 Score=321.97 Aligned_cols=263 Identities=24% Similarity=0.382 Sum_probs=202.4
Q ss_pred CCCcceeeeecccCceEEEEEEECC-----c--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-----A--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-----~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
..+|.+.+.||+|+||.||+|.+.. . .+++|. .+.. .....+.+ .+|+.++++++||||++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~--~~~~--~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~ 75 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKA--LKDP--TLAARKDF----QREAELLTNLQHEHIVKFYGV 75 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEe--cCCc--cHHHHHHH----HHHHHHHhcCCCCCcceEEEE
Confidence 4578999999999999999998532 2 244444 3321 22222334 789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----------cCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELHS 947 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-----------~~~~~ls~~~i~~Ia~qIa~gL~yLHs 947 (1142)
+.... ..++||||+++++|.+++..... .....+++..++.++.||+.||+|||+
T Consensus 76 ~~~~~--------------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~ 141 (291)
T cd05094 76 CGDGD--------------PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS 141 (291)
T ss_pred EccCC--------------ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 87654 34999999999999999975321 112358999999999999999999999
Q ss_pred CCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC
Q 001142 948 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1027 (1142)
Q Consensus 948 ~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1027 (1142)
+||+||||||+|||++.+ +.++|+|||++......... .......++..|+|||++.+ ..+
T Consensus 142 ~~i~H~dlkp~Nil~~~~-------~~~~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~ 202 (291)
T cd05094 142 QHFVHRDLATRNCLVGAN-------LLVKIGDFGMSRDVYSTDYY--------RVGGHTMLPIRWMPPESIMY----RKF 202 (291)
T ss_pred CCeeecccCcceEEEccC-------CcEEECCCCcccccCCCcee--------ecCCCCCcceeecChHHhcc----CCC
Confidence 999999999999999887 78999999999754332110 01123356788999999875 567
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001142 1028 GLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1106 (1142)
Q Consensus 1028 s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1106 (1142)
+.++|||||||++|||++ |+.||...+..+....+..+..+... ...+..+.
T Consensus 203 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~ 255 (291)
T cd05094 203 TTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP---------------------------RVCPKEVY 255 (291)
T ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCC---------------------------ccCCHHHH
Confidence 889999999999999999 99999877766665555443322111 03355689
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 001142 1107 DVFRRCTEENPTERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1107 dLI~~CL~~DP~~RPSa~EVL~~L~~~~ss 1136 (1142)
+++.+||+.||.+|||+.+|++.+.....+
T Consensus 256 ~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 256 DIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 999999999999999999999998876543
No 159
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.9e-34 Score=317.09 Aligned_cols=254 Identities=24% Similarity=0.359 Sum_probs=203.0
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|+||.||++.. .+..+++|....... .....+.+ .+|+.++++++||||+++++++.+.+
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--SPKEREES----RKEVAVLSNMKHPNIVQYQESFEENG-- 72 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--ChHHHHHH----HHHHHHHHhCCCCCeeeeEeeecCCC--
Confidence 488999999999999999987 456677777543321 22233334 78999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
+.++||||+++++|.+++.. .....+++..+..++.|++.||.|||++|++|+||+|+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~ 137 (256)
T cd08218 73 ------------NLYIVMDYCEGGDLYKKINA---QRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKD 137 (256)
T ss_pred ------------eEEEEEecCCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC
Confidence 45999999999999999875 222357899999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+........ ......|++.|+|||++.+ ..++.++|||||||++++|++
T Consensus 138 -------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~~----~~~~~~~Dv~slG~i~~~l~~ 196 (256)
T cd08218 138 -------GTIKLGDFGIARVLNSTVE----------LARTCIGTPYYLSPEICEN----RPYNNKSDIWALGCVLYEMCT 196 (256)
T ss_pred -------CCEEEeeccceeecCcchh----------hhhhccCCccccCHHHhCC----CCCCCccchhHHHHHHHHHHc
Confidence 7899999999975533211 1123457889999999875 457789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||......+....+..+..+..+. ..+..+.+++.+||+.+|.+||++.+
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (256)
T cd08218 197 LKHAFEAGNMKNLVLKIIRGSYPPVSS---------------------------HYSYDLRNLVSQLFKRNPRDRPSVNS 249 (256)
T ss_pred CCCCccCCCHHHHHHHHhcCCCCCCcc---------------------------cCCHHHHHHHHHHhhCChhhCcCHHH
Confidence 999998766666655554443322111 34556899999999999999999999
Q ss_pred HHHHHHh
Q 001142 1126 LYEMFVA 1132 (1142)
Q Consensus 1126 VL~~L~~ 1132 (1142)
|++|+|+
T Consensus 250 vl~~~~~ 256 (256)
T cd08218 250 ILEKNFI 256 (256)
T ss_pred HhhCcCC
Confidence 9999985
No 160
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.2e-34 Score=317.42 Aligned_cols=252 Identities=23% Similarity=0.356 Sum_probs=200.7
Q ss_pred CCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.+|++.++||.|+||.||+|.+. +..+++|+.... .......+ .+|+.+++.++||||+++++++.+...
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~----~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~~- 76 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSD----DLLKQQDF----QKEVQALKRLRHKHLISLFAVCSVGEP- 76 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEecccc----chhhHHHH----HHHHHHHhcCCCcchhheeeeEecCCC-
Confidence 46899999999999999999984 466777764322 11122333 789999999999999999999876553
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.++||||+++++|.++++. .....+++..+..++.||+.||.|||++||+|+||||+||+++.+
T Consensus 77 -------------~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~ 140 (261)
T cd05148 77 -------------VYIITELMEKGSLLAFLRS---PEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGED 140 (261)
T ss_pred -------------eEEEEeecccCCHHHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCC
Confidence 4999999999999999975 223468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||.+........ ......++..|+|||++.. ..++.++||||||+++|+|++
T Consensus 141 -------~~~kl~d~g~~~~~~~~~~----------~~~~~~~~~~~~~PE~~~~----~~~~~~~DiwslG~~l~~l~~ 199 (261)
T cd05148 141 -------LVCKVADFGLARLIKEDVY----------LSSDKKIPYKWTAPEAASH----GTFSTKSDVWSFGILLYEMFT 199 (261)
T ss_pred -------ceEEEccccchhhcCCccc----------cccCCCCceEecCHHHHcc----CCCCchhhHHHHHHHHHHHHc
Confidence 7899999999976533211 1112235678999999865 467889999999999999998
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|+.||......+....+..+..+..+ ...++.+.+++.+||+.||.+|||+.
T Consensus 200 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~ 252 (261)
T cd05148 200 YGQVPYPGMNNHEVYDQITAGYRMPCP---------------------------AKCPQEIYKIMLECWAAEPEDRPSFK 252 (261)
T ss_pred CCCCCCCcCCHHHHHHHHHhCCcCCCC---------------------------CCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 89999877766666665433222111 14456789999999999999999999
Q ss_pred HHHHHHH
Q 001142 1125 DLYEMFV 1131 (1142)
Q Consensus 1125 EVL~~L~ 1131 (1142)
++++.|.
T Consensus 253 ~l~~~L~ 259 (261)
T cd05148 253 ALREELD 259 (261)
T ss_pred HHHHHHh
Confidence 9999875
No 161
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=9.6e-35 Score=321.73 Aligned_cols=258 Identities=28% Similarity=0.394 Sum_probs=196.2
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||.||+|++ .+..+|+|+...+. ......+ .+|+.++++++||||+++++++....
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~~----~~e~~~l~~~~h~~ii~~~~~~~~~~ 79 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP----GDDFSLI----QQEIFMVKECKHCNIVAYFGSYLSRE 79 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc----cchHHHH----HHHHHHHHhcCCCCeeeeeEEEEeCC
Confidence 45799999999999999999997 45667888764331 1122223 68999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++
T Consensus 80 --------------~~~iv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~ 140 (267)
T cd06646 80 --------------KLWICMEYCGGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT 140 (267)
T ss_pred --------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC
Confidence 35999999999999999865 24689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||++........ ......|++.|+|||.+... ....++.++|||||||++|||
T Consensus 141 ~~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~-~~~~~~~~~Dvws~G~il~el 202 (267)
T cd06646 141 DN-------GDVKLADFGVAAKITATIA----------KRKSFIGTPYWMAPEVAAVE-KNGGYNQLCDIWAVGITAIEL 202 (267)
T ss_pred CC-------CCEEECcCccceeeccccc----------ccCccccCccccCHhHcccc-cCCCCcchhhHHHHHHHHHHH
Confidence 77 7799999999976532110 11234588999999987532 124567899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||......+....+....... + ........+..+.+++.+||+.||++|||+
T Consensus 203 ~~g~~p~~~~~~~~~~~~~~~~~~~~-~----------------------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~ 259 (267)
T cd06646 203 AELQPPMFDLHPMRALFLMSKSNFQP-P----------------------KLKDKTKWSSTFHNFVKISLTKNPKKRPTA 259 (267)
T ss_pred HhCCCCccccchhhhheeeecCCCCC-C----------------------CCccccccCHHHHHHHHHHhhCChhhCcCH
Confidence 99999996544322211111110000 0 000001345679999999999999999999
Q ss_pred HHHHHHHH
Q 001142 1124 GDLYEMFV 1131 (1142)
Q Consensus 1124 ~EVL~~L~ 1131 (1142)
+++++|+|
T Consensus 260 ~~il~~l~ 267 (267)
T cd06646 260 ERLLTHLF 267 (267)
T ss_pred HHHhcCCC
Confidence 99999886
No 162
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=3.8e-34 Score=322.37 Aligned_cols=289 Identities=21% Similarity=0.225 Sum_probs=206.9
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|++|.||+|.+. +..+++|........... ......+..|+.++++++|+||+++++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-- 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAK---DGINFTALREIKLLQELKHPNIIGLLDVFGHKS-- 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEecccccccc---chhhHHHHHHHHHHhhcCCCCChhhhheeecCC--
Confidence 4788999999999999999974 567888876543321111 112233468999999999999999999988644
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+ +++|.+++... ...+++..+..++.||+.||.|||++||+|+||||+||+++.+
T Consensus 76 ------------~~~lv~e~~-~~~L~~~i~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~ 138 (298)
T cd07841 76 ------------NINLVFEFM-ETDLEKVIKDK----SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASD 138 (298)
T ss_pred ------------EEEEEEccc-CCCHHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCC
Confidence 349999999 89999999751 1368999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++........ ......+++.|+|||.+.+ ...++.++|||||||++|+|++
T Consensus 139 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~il~e~~~ 198 (298)
T cd07841 139 -------GVLKLADFGLARSFGSPNR----------KMTHQVVTRWYRAPELLFG---ARHYGVGVDMWSVGCIFAELLL 198 (298)
T ss_pred -------CCEEEccceeeeeccCCCc----------cccccccceeeeCHHHHhC---CCCCCcHHHHHHHHHHHHHHHc
Confidence 7899999999976543211 1122346888999999854 2457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|.+||.+....+....+...........+...........................+..+.+++.+||+.||++|||+.|
T Consensus 199 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e 278 (298)
T cd07841 199 RVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQ 278 (298)
T ss_pred CCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHH
Confidence 98888776655544444222111111111110000000000000111101111244678999999999999999999999
Q ss_pred HHHHHHhhcCCCC
Q 001142 1126 LYEMFVARTSSSI 1138 (1142)
Q Consensus 1126 VL~~L~~~~ss~~ 1138 (1142)
+++|.|+......
T Consensus 279 ~l~~~~~~~~~~~ 291 (298)
T cd07841 279 ALEHPYFSNDPAP 291 (298)
T ss_pred HhhCccccCCCCC
Confidence 9999999876443
No 163
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.1e-34 Score=333.65 Aligned_cols=265 Identities=23% Similarity=0.285 Sum_probs=201.2
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+++.. +..+|+|+...... ......+ .+.+|+.++..++|+||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~----~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM-LKRAETA----CFREERDVLVNGDRRWITNLHYAFQDEN- 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhhHH----HHHHHHHHHHhCCCCCCCceEEEEecCC-
Confidence 47999999999999999999974 56788887542110 0111222 2478999999999999999999988655
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+.|+||||+++++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~ 137 (331)
T cd05597 75 -------------NLYLVMDYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK 137 (331)
T ss_pred -------------eEEEEEecCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC
Confidence 349999999999999999752 246899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccC-CCCCCchhhHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-PNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~~~~s~ksDVwSLGviL~EL 1043 (1142)
+ +.+||+|||++........ .......||+.|+|||++..... ...++.++|||||||++|+|
T Consensus 138 ~-------~~~kl~Dfg~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el 201 (331)
T cd05597 138 N-------GHIRLADFGSCLRLLADGT---------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEM 201 (331)
T ss_pred C-------CCEEEEECCceeecCCCCC---------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHH
Confidence 7 7899999999865432111 01123468999999999874221 23578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--C
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE--R 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~--R 1120 (1142)
++|+.||.+....+....+..... ..++ ......++.+.+++.+||..++.+ |
T Consensus 202 ~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~~li~~ll~~~~~r~~r 257 (331)
T cd05597 202 LYGETPFYAESLVETYGKIMNHKEHFQFP------------------------PDVTDVSEEAKDLIRRLICSPETRLGR 257 (331)
T ss_pred hhCCCCCCCCCHHHHHHHHHcCCCcccCC------------------------CccCCCCHHHHHHHHHHccCcccccCC
Confidence 999999987766665555432211 1100 000135667899999988654443 8
Q ss_pred CCHHHHHHHHHhhc
Q 001142 1121 PTAGDLYEMFVART 1134 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ 1134 (1142)
|++.++++|+|+..
T Consensus 258 ~~~~~~l~hp~~~~ 271 (331)
T cd05597 258 NGLQDFKDHPFFEG 271 (331)
T ss_pred CCHHHHhcCCCCCC
Confidence 89999999999864
No 164
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4.3e-34 Score=314.23 Aligned_cols=254 Identities=27% Similarity=0.402 Sum_probs=202.6
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|+||.||.++. .+..+++|..... .......+.+ .+|++++++++|+||+++++++.+..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~----~~e~~~l~~~~h~~i~~~~~~~~~~~-- 72 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLT--RLSEKERRDA----LNEIVILSLLQHPNIIAYYNHFMDDN-- 72 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeec--ccchhHHHHH----HHHHHHHHhCCCCCeeEEEeEEecCC--
Confidence 488999999999999998887 4566777765433 2223333344 78999999999999999999998654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++... ....+++..+..++.|++.||.|||+.|++|+||+|+||+++.+
T Consensus 73 ------------~~~~~~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~ 137 (256)
T cd08221 73 ------------TLLIEMEYANGGTLYDKIVRQ---KGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKA 137 (256)
T ss_pred ------------eEEEEEEecCCCcHHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCC
Confidence 349999999999999998762 23468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||.+........ ......|++.|+|||.+.+ ..++.++||||||+++|+|++
T Consensus 138 -------~~~kl~d~~~~~~~~~~~~----------~~~~~~~~~~y~ape~~~~----~~~~~~~Dv~slG~i~~~l~~ 196 (256)
T cd08221 138 -------GLIKLGDFGISKILGSEYS----------MAETVVGTPYYMSPELCQG----VKYNFKSDIWALGCVLYELLT 196 (256)
T ss_pred -------CCEEECcCcceEEcccccc----------cccccCCCccccCHhhcCC----CCCCCcchhHHHHHHHHHHHH
Confidence 7899999999875533211 1123468999999999875 456789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|..||......+....+..+..+... ...+..+.+++.+||+.+|.+||++.+
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~R~s~~~ 249 (256)
T cd08221 197 LKRTFDATNPLNLVVKIVQGNYTPVV---------------------------SVYSSELISLVHSLLQQDPEKRPTADE 249 (256)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCc---------------------------cccCHHHHHHHHHHcccCcccCCCHHH
Confidence 99999876666665555443322111 134566899999999999999999999
Q ss_pred HHHHHHh
Q 001142 1126 LYEMFVA 1132 (1142)
Q Consensus 1126 VL~~L~~ 1132 (1142)
+++++|.
T Consensus 250 ll~~~~l 256 (256)
T cd08221 250 VLDQPLL 256 (256)
T ss_pred HhhCcCC
Confidence 9999874
No 165
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.9e-34 Score=323.89 Aligned_cols=259 Identities=23% Similarity=0.287 Sum_probs=199.0
Q ss_pred cceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|+..+.||+|+||+||+|.+. +..+|+|+....... ..... ..+.+|++++++++|+||+.+++++...+
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~----~~~~~E~~il~~l~~~~i~~~~~~~~~~~--- 73 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIK-KRKGE----SMALNEKQILEKVNSQFVVNLAYAYETKD--- 73 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhh-hhhHH----HHHHHHHHHHHHcCCcCceeEEEEEecCC---
Confidence 678899999999999999984 567788875432111 11111 22368999999999999999999887654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..++||||+++++|.+++.. .+...+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus 74 -----------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~- 138 (285)
T cd05632 74 -----------ALCLVLTIMNGGDLKFHIYN---MGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDY- 138 (285)
T ss_pred -----------EEEEEEEeccCccHHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCC-
Confidence 34999999999999988865 223469999999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++|+|||++....... ......|+..|+|||++.+ ..++.++|||||||++|+|++|
T Consensus 139 ------~~~kl~Dfg~~~~~~~~~-----------~~~~~~g~~~~~aPE~~~~----~~~~~~~Di~slG~~l~~l~~g 197 (285)
T cd05632 139 ------GHIRISDLGLAVKIPEGE-----------SIRGRVGTVGYMAPEVLNN----QRYTLSPDYWGLGCLIYEMIEG 197 (285)
T ss_pred ------CCEEEecCCcceecCCCC-----------cccCCCCCcCccChHHhcC----CCCCcccchHHHHHHHHHHHhC
Confidence 689999999986543211 1123468999999999875 5678999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC----
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT---- 1122 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS---- 1122 (1142)
..||.+.........+......... . .....+..+.+|+.+||+.||++||+
T Consensus 198 ~~P~~~~~~~~~~~~~~~~~~~~~~-------------------~-----~~~~~~~~~~~li~~~l~~~P~~R~~~~~~ 253 (285)
T cd05632 198 QSPFRGRKEKVKREEVDRRVLETEE-------------------V-----YSAKFSEEAKSICKMLLTKDPKQRLGCQEE 253 (285)
T ss_pred CCCCCCCCHHHHHHHHHHhhhcccc-------------------c-----cCccCCHHHHHHHHHHccCCHhHcCCCccc
Confidence 9999876554333332211100000 0 00134556899999999999999999
Q ss_pred -HHHHHHHHHhhcC
Q 001142 1123 -AGDLYEMFVARTS 1135 (1142)
Q Consensus 1123 -a~EVL~~L~~~~s 1135 (1142)
+.++++|.|++..
T Consensus 254 ~~~~l~~~~~~~~~ 267 (285)
T cd05632 254 GAGEVKRHPFFRNM 267 (285)
T ss_pred ChHHHHcChhhhcC
Confidence 8999999998754
No 166
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.2e-34 Score=321.82 Aligned_cols=259 Identities=20% Similarity=0.301 Sum_probs=200.2
Q ss_pred CCCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
+.+|++.+.||+|+||.||+|.+.+ ..+|+|+...+ . .....+ .+.+|+.++.+++||||++++++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~--~-~~~~~~----~~~~e~~~~~~l~h~~iv~~~~~ 76 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDK--A-EGPLRE----EFKHEAMMRSRLQHPNIVCLLGV 76 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCC--C-CHHHHH----HHHHHHHHHhcCCCCCcCeEEEE
Confidence 4568999999999999999998732 45677764322 1 122222 34789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----------cCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELHS 947 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-----------~~~~~ls~~~i~~Ia~qIa~gL~yLHs 947 (1142)
+.+... .++++||+++++|.+++..... .....+++..+..++.|++.||+|||+
T Consensus 77 ~~~~~~--------------~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~ 142 (283)
T cd05091 77 VTKEQP--------------LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS 142 (283)
T ss_pred EcCCCc--------------eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 876543 4899999999999999853110 112358889999999999999999999
Q ss_pred CCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC
Q 001142 948 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1027 (1142)
Q Consensus 948 ~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1027 (1142)
+||+||||||+|||++.+ +.+||+|||+++........ .......+++.|+|||++.+ ..+
T Consensus 143 ~gi~H~dlkp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~ 203 (283)
T cd05091 143 HHVVHKDLATRNVLVFDK-------LNVKISDLGLFREVYAADYY--------KLMGNSLLPIRWMSPEAIMY----GKF 203 (283)
T ss_pred cCccccccchhheEecCC-------CceEecccccccccccchhe--------eeccCccCCccccCHHHHhc----CCC
Confidence 999999999999999876 77999999998764332111 01122346788999999865 457
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001142 1028 GLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1106 (1142)
Q Consensus 1028 s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1106 (1142)
+.++|||||||++|||++ |..||.+....+..+.+........+ ...+..+.
T Consensus 204 ~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~ 256 (283)
T cd05091 204 SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP---------------------------DDCPAWVY 256 (283)
T ss_pred CcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHH
Confidence 899999999999999998 88999887777776666554332211 14556789
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHH
Q 001142 1107 DVFRRCTEENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1107 dLI~~CL~~DP~~RPSa~EVL~~L~ 1131 (1142)
+++.+||+.+|++||++.+|+..+.
T Consensus 257 ~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 257 TLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHhCCCcccCCCHHHHHHHhh
Confidence 9999999999999999999998763
No 167
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=3.2e-34 Score=316.06 Aligned_cols=251 Identities=24% Similarity=0.373 Sum_probs=196.8
Q ss_pred CCCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..+|++.+.||+|+||.||+|.+.. ..+++|+.. .... ....+ .+|+.++++++||||+++++++...+.
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~--~~~~---~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~~ 73 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIR--EGAM---SEDDF----IEEAKVMMKLSHPNLVQLYGVCTKQRP 73 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecCCccEEEEEec--cCCC---CHHHH----HHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 4568999999999999999998853 467888743 2111 11233 689999999999999999999876543
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 74 --------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~ 135 (256)
T cd05059 74 --------------IFIVTEYMANGCLLNYLRER----KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE 135 (256)
T ss_pred --------------eEEEEecCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC
Confidence 49999999999999998752 236899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||.++........ ......++..|+|||.+.+ ..++.++||||||+++|+|+
T Consensus 136 ~-------~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~Pe~~~~----~~~~~~~Di~slG~il~~l~ 195 (256)
T cd05059 136 D-------NVVKVSDFGLARYVLDDQYT---------SSQGTKFPVKWAPPEVFDY----SRFSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred C-------CcEEECCcccceeccccccc---------ccCCCCCCccccCHHHhcc----CCCCchhhHHHHHHHHHHHh
Confidence 7 78999999998754321100 0111124557999999875 56788999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |+.||...+..+....+.....+..+ ...+..+.+++.+||..+|++|||+
T Consensus 196 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~cl~~~p~~Rpt~ 248 (256)
T cd05059 196 SEGKMPYERFSNSEVVESVSAGYRLYRP---------------------------KLAPTEVYTIMYSCWHEKPEDRPAF 248 (256)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHhcCChhhCcCH
Confidence 9 89999876666655555433221111 1345679999999999999999999
Q ss_pred HHHHHHH
Q 001142 1124 GDLYEMF 1130 (1142)
Q Consensus 1124 ~EVL~~L 1130 (1142)
.|+++.+
T Consensus 249 ~~~l~~l 255 (256)
T cd05059 249 KKLLSQL 255 (256)
T ss_pred HHHHHHh
Confidence 9999875
No 168
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=5.4e-34 Score=320.38 Aligned_cols=259 Identities=22% Similarity=0.363 Sum_probs=198.3
Q ss_pred CcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+|++.+.||+|+||.||+|.... ..+++|+. .... .....+.+ .+|+.+++.++||||+++++.+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~--~~~~-~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~ 73 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKML--KENA-SSSELRDL----LSEFNLLKQVNHPHVIKLYGACS 73 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEec--CCCC-CHHHHHHH----HHHHHHHhhCCCCCEeeEEEEEe
Confidence 47889999999999999998632 23555543 2211 12223334 78999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-------------------cCCCCCCHHHHHHHHHHHHHH
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-------------------TGEKHVSVKLALFIAQDVAAA 941 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-------------------~~~~~ls~~~i~~Ia~qIa~g 941 (1142)
..+. .++||||+++++|.+++..... .....+++..+..++.|++.|
T Consensus 74 ~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~ 139 (290)
T cd05045 74 QDGP--------------LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRG 139 (290)
T ss_pred cCCC--------------cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHH
Confidence 6553 3999999999999999875321 112358899999999999999
Q ss_pred HHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccc
Q 001142 942 LVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAM 1021 (1142)
Q Consensus 942 L~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 1021 (1142)
|.|||+++|+||||||+|||++.+ +.+||+|||++......... .......++..|+|||++.+
T Consensus 140 l~~LH~~~ivH~dikp~nill~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~- 203 (290)
T cd05045 140 MQYLAEMKLVHRDLAARNVLVAEG-------RKMKISDFGLSRDVYEEDSY--------VKRSKGRIPVKWMAIESLFD- 203 (290)
T ss_pred HHHHHHCCeehhhhhhheEEEcCC-------CcEEeccccccccccCccch--------hcccCCCCCccccCHHHHcc-
Confidence 999999999999999999999876 78999999998754321110 01112345678999999865
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhh
Q 001142 1022 HKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE 1100 (1142)
Q Consensus 1022 ~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1100 (1142)
..++.++||||||+++|||++ |..||.+....++...+.....+..+ ..
T Consensus 204 ---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~ 253 (290)
T cd05045 204 ---HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERP---------------------------EN 253 (290)
T ss_pred ---CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCC---------------------------CC
Confidence 567899999999999999998 99999887766665554433221111 13
Q ss_pred hHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1101 TLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1101 ~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.+..+.+++.+||+.+|.+||++.++++.+...
T Consensus 254 ~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 254 CSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred CCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 456799999999999999999999999988764
No 169
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.4e-34 Score=316.94 Aligned_cols=264 Identities=25% Similarity=0.343 Sum_probs=201.3
Q ss_pred CcceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
+|++.+.||+|+||.||+|.. .+..+|+|+...+.. ......+....+.+|++++++++|+||+++++++.+..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~--~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTS--NVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN--- 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCcc--chhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC---
Confidence 478899999999999999987 556688887654422 11222222345689999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..++||||+++++|.+++.+ ...+++..+..++.|++.||+|||+.+|+|+||+|+||+++.+
T Consensus 76 -----------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~- 138 (265)
T cd06631 76 -----------TISIFMEFVPGGSISSILNR-----FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPN- 138 (265)
T ss_pred -----------eEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCC-
Confidence 34999999999999999975 2458899999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++|+|||.+........... .........|+..|+|||++.+ ..++.++||||||+++|+|++|
T Consensus 139 ------~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~Dv~slG~~~~~l~~g 204 (265)
T cd06631 139 ------GIIKLIDFGCARRLAWVGLHGT----HSNMLKSMHGTPYWMAPEVINE----SGYGRKSDIWSIGCTVFEMATG 204 (265)
T ss_pred ------CeEEeccchhhHhhhhcccccc----ccccccccCCCccccChhhhcC----CCCcchhhHHHHHHHHHHHHhC
Confidence 7899999999875432111100 0011123458999999999875 4578999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
+.||...........+....... +......+..+.+++.+||+.+|.+||++.++
T Consensus 205 ~~p~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~ 259 (265)
T cd06631 205 KPPLASMDRLAAMFYIGAHRGLM-------------------------PRLPDSFSAAAIDFVTSCLTRDQHERPSALQL 259 (265)
T ss_pred CCccccCChHHHHHHhhhccCCC-------------------------CCCCCCCCHHHHHHHHHHhcCCcccCCCHHHH
Confidence 99998655443322222111000 00011445678999999999999999999999
Q ss_pred HHHHHh
Q 001142 1127 YEMFVA 1132 (1142)
Q Consensus 1127 L~~L~~ 1132 (1142)
+.|+|+
T Consensus 260 l~~~~~ 265 (265)
T cd06631 260 LRHDFL 265 (265)
T ss_pred hcCCCC
Confidence 999985
No 170
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.4e-34 Score=323.11 Aligned_cols=259 Identities=25% Similarity=0.443 Sum_probs=204.4
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||.|++|.||+|.+ .+..+++|...... ....+.+ .+|+.+++.++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~----~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~ 89 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK----QPKKELI----INEILVMKELKNPNIVNFLDSFLVGD 89 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc----CchHHHH----HHHHHHHHhcCCCceeeeeeeEecCc
Confidence 45699999999999999999986 46678888754332 1222233 78999999999999999999987644
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|..++.. ..+++.++..++.|++.||+|||++|++||||||+||+++
T Consensus 90 --------------~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~ 149 (296)
T cd06655 90 --------------ELFVVMEYLAGGSLTDVVTE------TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG 149 (296)
T ss_pred --------------eEEEEEEecCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 45999999999999998865 3589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||++........ ......++..|+|||.+.+ ..++.++|||||||++|+|
T Consensus 150 ~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slGvil~~l 208 (296)
T cd06655 150 MD-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEM 208 (296)
T ss_pred CC-------CCEEEccCccchhcccccc----------cCCCcCCCccccCcchhcC----CCCCchhhHHHHHHHHHHH
Confidence 77 7899999999875432111 1123458889999999875 4578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||...+.......+.....+.+.. ....++.+.+++.+||..||.+||++
T Consensus 209 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~dp~~Rpt~ 263 (296)
T cd06655 209 VEGEPPYLNENPLRALYLIATNGTPELQN-------------------------PEKLSPIFRDFLNRCLEMDVEKRGSA 263 (296)
T ss_pred HhCCCCCCCCCHHHHHHHHHhcCCcccCC-------------------------cccCCHHHHHHHHHHhhcChhhCCCH
Confidence 99999998766544333332222111100 01345678999999999999999999
Q ss_pred HHHHHHHHhhcCCCC
Q 001142 1124 GDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss~~ 1138 (1142)
.++++|+|+......
T Consensus 264 ~~il~~~~~~~~~~~ 278 (296)
T cd06655 264 KELLQHPFLKLAKPL 278 (296)
T ss_pred HHHhhChHhhhcccc
Confidence 999999999875544
No 171
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=3.3e-34 Score=318.90 Aligned_cols=256 Identities=30% Similarity=0.447 Sum_probs=205.4
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||.|++|.||+|.+ .+..+++|+..... .......+ .+|+.++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~- 72 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE---AEDEIEDI----QQEIQFLSQCRSPYITKYYGSFLKGS- 72 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc---cchHHHHH----HHHHHHHHHcCCCCeeeeeEEEEECC-
Confidence 3688999999999999999997 45678888765432 12223334 68999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. .++++..+..++.|++.||.|||+++|+||||+|+||+++.
T Consensus 73 -------------~~~~v~e~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~ 133 (274)
T cd06609 73 -------------KLWIIMEYCGGGSCLDLLKP------GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE 133 (274)
T ss_pred -------------eEEEEEEeeCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC
Confidence 45999999999999999875 26899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||.++....... ......+++.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 134 ~-------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~----~~~~~~sDv~slG~il~~l~ 192 (274)
T cd06609 134 E-------GDVKLADFGVSGQLTSTMS----------KRNTFVGTPFWMAPEVIKQ----SGYDEKADIWSLGITAIELA 192 (274)
T ss_pred C-------CCEEEcccccceeeccccc----------ccccccCCccccChhhhcc----CCCCchhhHHHHHHHHHHHH
Confidence 7 7899999999976643211 1123458889999999876 44889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|+.||...+.......+.....+.... ...+..+.+++.+||..||++|||++
T Consensus 193 tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~~l~~~p~~Rpt~~ 246 (274)
T cd06609 193 KGEPPLSDLHPMRVLFLIPKNNPPSLEG--------------------------NKFSKPFKDFVSLCLNKDPKERPSAK 246 (274)
T ss_pred hCCCCcccCchHHHHHHhhhcCCCCCcc--------------------------cccCHHHHHHHHHHhhCChhhCcCHH
Confidence 9999998766554444443332222110 01455689999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 001142 1125 DLYEMFVARTSS 1136 (1142)
Q Consensus 1125 EVL~~L~~~~ss 1136 (1142)
++++|+|+....
T Consensus 247 ~il~~~~~~~~~ 258 (274)
T cd06609 247 ELLKHKFIKKAK 258 (274)
T ss_pred HHhhChhhcCCC
Confidence 999999998654
No 172
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.7e-34 Score=318.76 Aligned_cols=281 Identities=23% Similarity=0.297 Sum_probs=200.6
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|++|.||+|.+. +..+++|+..... ......+. +.+|+.++++++||||+++++++....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~----~~~e~~~l~~~~h~~i~~~~~~~~~~~- 73 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE--DDPVIKKI----ALREIRMLKQLKHPNLVNLIEVFRRKR- 73 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecc--cCccccHH----HHHHHHHHHhCCCCCEeeeeeEEeeCC-
Confidence 36899999999999999999984 5678888754321 11111122 368999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 74 -------------~~~~v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~ 135 (286)
T cd07847 74 -------------KLHLVFEYCDHTVLNELEKN-----PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK 135 (286)
T ss_pred -------------EEEEEEeccCccHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC
Confidence 34999999998888777653 235899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||++........ ......++..|+|||++.+ ...++.++||||||+++|+|+
T Consensus 136 ~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~i~~~l~ 195 (286)
T cd07847 136 Q-------GQIKLCDFGFARILTGPGD----------DYTDYVATRWYRAPELLVG---DTQYGPPVDVWAIGCVFAELL 195 (286)
T ss_pred C-------CcEEECccccceecCCCcc----------cccCcccccccCCHHHHhC---CCCcCchhhhHHHHHHHHHHH
Confidence 7 7899999999976543211 1112357888999999865 235778999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhc--ccc-cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALG--SCH-EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||.+....+....+................ ... ....................+..+.+++.+||+.||++||
T Consensus 196 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 275 (286)
T cd07847 196 TGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERL 275 (286)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccC
Confidence 9999998766554433332211111111000000 000 0000000000000001113467799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001142 1122 TAGDLYEMFVA 1132 (1142)
Q Consensus 1122 Sa~EVL~~L~~ 1132 (1142)
++.|++.|+|+
T Consensus 276 ~~~eil~~~~f 286 (286)
T cd07847 276 SCEELLEHPYF 286 (286)
T ss_pred CHHHHhcCCCC
Confidence 99999999986
No 173
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=8.8e-34 Score=316.63 Aligned_cols=258 Identities=21% Similarity=0.302 Sum_probs=198.3
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--Cc----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SA----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~----~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
...+|++.++||+|+||+||+|++. +. .+|+|+.+.. . .....+. +.+|+.++..++||||++++++
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~--~-~~~~~~~----~~~e~~~l~~~~~~~i~~~~~~ 77 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN--T-SPKANKE----ILDEAYVMAGVGSPYVCRLLGI 77 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC--C-CHHHHHH----HHHHHHHHHhcCCCCCceEEEE
Confidence 3457899999999999999999873 32 2567764322 1 2222233 3789999999999999999998
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
+.... .+++|||+++|+|.+++.. ....+++..+..++.||+.||+|||+++|+||||||+
T Consensus 78 ~~~~~---------------~~l~~~~~~~g~l~~~l~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~ 138 (279)
T cd05109 78 CLTST---------------VQLVTQLMPYGCLLDYVRE----NKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAAR 138 (279)
T ss_pred EcCCC---------------cEEEEEcCCCCCHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 86422 3799999999999999875 1246899999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||++.+ +.+||+|||+++......... ......+++.|+|||...+ ..++.++|||||||
T Consensus 139 Nil~~~~-------~~~kL~dfG~~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~ 199 (279)
T cd05109 139 NVLVKSP-------NHVKITDFGLARLLDIDETEY--------HADGGKVPIKWMALESILH----RRFTHQSDVWSYGV 199 (279)
T ss_pred eEEEcCC-------CcEEECCCCceeeccccccee--------ecCCCccchhhCCHHHhcc----CCCCchhHHHHHHH
Confidence 9999876 679999999997654321110 0111235678999999865 46789999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
++|||++ |..||...........+..+..+..+ ...+..+.+++.+||+.||
T Consensus 200 ~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~dp 252 (279)
T cd05109 200 TVWELMTFGAKPYDGIPAREIPDLLEKGERLPQP---------------------------PICTIDVYMIMVKCWMIDS 252 (279)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCC---------------------------ccCCHHHHHHHHHHcCCCh
Confidence 9999998 99999876665555555443322111 1345568999999999999
Q ss_pred CCCCCHHHHHHHHHhhc
Q 001142 1118 TERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~ 1134 (1142)
++||++.++++.+....
T Consensus 253 ~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 253 ECRPRFRELVDEFSRMA 269 (279)
T ss_pred hhCcCHHHHHHHHHHhh
Confidence 99999999998766543
No 174
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.4e-34 Score=325.31 Aligned_cols=258 Identities=26% Similarity=0.428 Sum_probs=201.3
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|.. .+..+|+|...... ....+. +.+|+.+++.++||||+++++++...+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~----~~~e~~~l~~~~h~~i~~~~~~~~~~~- 89 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ----QPKKEL----IINEILVMRENKNPNIVNYLDSYLVGD- 89 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc----cchHHH----HHHHHHHHHhCCCCCEeeEEEEEecCC-
Confidence 5799999999999999999986 46778888754322 122222 378999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.+ ..+++..+..++.|++.||.|||+.||+||||||+|||++.
T Consensus 90 -------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~ 150 (297)
T cd06656 90 -------------ELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM 150 (297)
T ss_pred -------------EEEEeecccCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence 34999999999999999865 35789999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||.+........ ......+++.|+|||.+.+ ..++.++|||||||++|+|+
T Consensus 151 ~-------~~~~l~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slGvil~~l~ 209 (297)
T cd06656 151 D-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEMV 209 (297)
T ss_pred C-------CCEEECcCccceEccCCcc----------CcCcccCCccccCHHHHcC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 7899999999865432111 1123458889999999875 55789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|..||...+.......+.....+... .....++.+.+++.+||+.||++||++.
T Consensus 210 tg~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~ 264 (297)
T cd06656 210 EGEPPYLNENPLRALYLIATNGTPELQ-------------------------NPERLSAVFRDFLNRCLEMDVDRRGSAK 264 (297)
T ss_pred hCCCCCCCCCcchheeeeccCCCCCCC-------------------------CccccCHHHHHHHHHHccCChhhCcCHH
Confidence 999999765433221111111111100 0113456689999999999999999999
Q ss_pred HHHHHHHhhcCCCC
Q 001142 1125 DLYEMFVARTSSSI 1138 (1142)
Q Consensus 1125 EVL~~L~~~~ss~~ 1138 (1142)
++++|+|++.....
T Consensus 265 ~il~~~~~~~~~~~ 278 (297)
T cd06656 265 ELLQHPFLKLAKPL 278 (297)
T ss_pred HHhcCchhcccccc
Confidence 99999999765443
No 175
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=8.6e-34 Score=317.44 Aligned_cols=256 Identities=21% Similarity=0.289 Sum_probs=195.8
Q ss_pred CCCcceeeeecccCceEEEEEEEC--Ccc----EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SAD----AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~----vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
..+|++.+.||+|+||+||+|.+. +.. +++|.. ... .......+ +..|+.+++++.||||+++++++
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~--~~~-~~~~~~~~----~~~~~~~l~~l~h~~iv~~~~~~ 78 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTI--QDR-SGRQTFQE----ITDHMLAMGSLDHAYIVRLLGIC 78 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeec--ccc-cchHHHHH----HHHHHHHHhcCCCCCcceEEEEE
Confidence 457899999999999999999983 333 344432 211 11122223 36788899999999999999987
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
... ..++||||+++|+|.+++... ...+++..+..|+.||+.||.|||++|++||||||+|
T Consensus 79 ~~~---------------~~~~i~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~n 139 (279)
T cd05111 79 PGA---------------SLQLVTQLSPLGSLLDHVRQH----RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARN 139 (279)
T ss_pred CCC---------------ccEEEEEeCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcce
Confidence 432 237999999999999999751 2468999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||.++........ .......++..|+|||.+.+ ..++.++|||||||+
T Consensus 140 ili~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~~pE~~~~----~~~~~~~Dv~slG~i 200 (279)
T cd05111 140 ILLKSD-------SIVQIADFGVADLLYPDDKK--------YFYSEHKTPIKWMALESILF----GRYTHQSDVWSYGVT 200 (279)
T ss_pred EEEcCC-------CcEEEcCCccceeccCCCcc--------cccCCCCCcccccCHHHhcc----CCcCchhhHHHHHHH
Confidence 999877 78999999999754322111 01123346778999999875 468899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|||++ |+.||.+.......+.+..+..+..+. .++..+.+++.+||..||+
T Consensus 201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~c~~~~p~ 253 (279)
T cd05111 201 VWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQ---------------------------ICTIDVYMVMVKCWMIDEN 253 (279)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCC---------------------------CCCHHHHHHHHHHcCCCcc
Confidence 999998 999998876665555554443322110 2234578899999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001142 1119 ERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~ 1133 (1142)
+|||+.|+++.+...
T Consensus 254 ~Rps~~el~~~l~~~ 268 (279)
T cd05111 254 VRPTFKELANEFTRM 268 (279)
T ss_pred cCcCHHHHHHHHHHH
Confidence 999999999987654
No 176
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=8.8e-35 Score=334.35 Aligned_cols=265 Identities=23% Similarity=0.289 Sum_probs=201.6
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||.||++++. +..+|+|+...... ...... ..+..|+.++..++|+||+++++++.+.+
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~----~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-LKRAET----ACFREERDVLVNGDNQWITTLHYAFQDEN- 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH-HHhhHH----HHHHHHHHHHhhCCCCCEeeEEEEEecCC-
Confidence 47899999999999999999985 45577776532110 011111 22478999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++|+|.+++.+. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~ey~~~g~L~~~l~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~ 137 (332)
T cd05623 75 -------------NLYLVMDYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM 137 (332)
T ss_pred -------------EEEEEEeccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC
Confidence 359999999999999999752 246899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL~EL 1043 (1142)
+ +.+||+|||++........ .......||+.|+|||++.... ....++.++|||||||++|||
T Consensus 138 ~-------~~~kL~DfG~a~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~el 201 (332)
T cd05623 138 N-------GHIRLADFGSCLKLMEDGT---------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEM 201 (332)
T ss_pred C-------CCEEEeecchheecccCCc---------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHH
Confidence 7 7899999999865432111 1112346999999999986422 124578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--C
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE--R 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~--R 1120 (1142)
++|+.||...+..+....+..... ...+ ......++.+.+++.+|+..++.+ |
T Consensus 202 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~p------------------------~~~~~~s~~~~~li~~ll~~~~~r~~r 257 (332)
T cd05623 202 LYGETPFYAESLVETYGKIMNHKERFQFP------------------------AQVTDVSEDAKDLIRRLICSREHRLGQ 257 (332)
T ss_pred hcCCCCCCCCCHHHHHHHHhCCCccccCC------------------------CccccCCHHHHHHHHHHccChhhhcCC
Confidence 999999998777666665543221 1100 000145667899999998665544 7
Q ss_pred CCHHHHHHHHHhhc
Q 001142 1121 PTAGDLYEMFVART 1134 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ 1134 (1142)
++++|+++|+|+..
T Consensus 258 ~~~~~~~~h~~f~~ 271 (332)
T cd05623 258 NGIEDFKQHPFFTG 271 (332)
T ss_pred CCHHHHhCCCCcCC
Confidence 89999999999875
No 177
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=7.7e-34 Score=312.49 Aligned_cols=249 Identities=26% Similarity=0.408 Sum_probs=201.3
Q ss_pred CCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
..+|++.+.||+|+||.||+|...+..+++|...... ...+.+ .+|+.++++++|+||+++++++.+..
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~-----~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 73 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDS-----TAAQAF----LAEASVMTTLRHPNLVQLLGVVLQGN-- 73 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecCcEEEEEEeccch-----hHHHHH----HHHHHHHHhcCCcceeeeEEEEcCCC--
Confidence 4578999999999999999999999999999864331 123333 78999999999999999999987644
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++.. .....+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus 74 ------------~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~ 138 (256)
T cd05039 74 ------------PLYIVTEYMAKGSLVDYLRS---RGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSED 138 (256)
T ss_pred ------------CeEEEEEecCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCC
Confidence 34999999999999999976 222368999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+....... ....++..|+|||++.. ..++.++||||||+++|+|++
T Consensus 139 -------~~~~l~d~g~~~~~~~~~-------------~~~~~~~~~~ape~~~~----~~~~~~~Di~slG~il~~l~~ 194 (256)
T cd05039 139 -------LVAKVSDFGLAKEASQGQ-------------DSGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEIYS 194 (256)
T ss_pred -------CCEEEccccccccccccc-------------ccCCCcccccCchhhcC----CcCCcHHHHHHHHHHHHHHHh
Confidence 789999999997653211 01224567999999865 467889999999999999997
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|..||......++...+.....+..+ ...++.+.+++.+||..+|.+|||+.
T Consensus 195 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 247 (256)
T cd05039 195 FGRVPYPRIPLKDVVPHVEKGYRMEAP---------------------------EGCPPEVYKVMKDCWELDPAKRPTFK 247 (256)
T ss_pred cCCCCCCCCCHHHHHHHHhcCCCCCCc---------------------------cCCCHHHHHHHHHHhccChhhCcCHH
Confidence 99999877666655554433221111 13456789999999999999999999
Q ss_pred HHHHHHH
Q 001142 1125 DLYEMFV 1131 (1142)
Q Consensus 1125 EVL~~L~ 1131 (1142)
++++.+.
T Consensus 248 ~l~~~l~ 254 (256)
T cd05039 248 QLREQLA 254 (256)
T ss_pred HHHHHHh
Confidence 9999875
No 178
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=6e-34 Score=316.75 Aligned_cols=259 Identities=23% Similarity=0.367 Sum_probs=200.6
Q ss_pred CCCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
.++|++.+.||+|+||.||+|.+.. ..+++|... .. ........+ .+|+.+++.++||||++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~--~~-~~~~~~~~~----~~e~~~l~~~~~~~i~~~~~~ 77 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVN--EN-ASMRERIEF----LNEASVMKEFNCHHVVRLLGV 77 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecC--Cc-cCHHHHHHH----HHHHHHHHhCCCCceeEEEEE
Confidence 3578999999999999999998743 457777642 21 122222333 789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----GEKHVSVKLALFIAQDVAAALVELHSKHIMHR 953 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHr 953 (1142)
+..... .++||||+++++|.+++...... ....+++..+..++.||+.||.|||+++|+||
T Consensus 78 ~~~~~~--------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 143 (277)
T cd05032 78 VSTGQP--------------TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHR 143 (277)
T ss_pred EcCCCC--------------cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 876543 39999999999999999753221 12347889999999999999999999999999
Q ss_pred CCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001142 954 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1033 (1142)
Q Consensus 954 DLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1033 (1142)
||||+|||++.+ +.+||+|||.++........ .......++..|+|||.+.. ..++.++||
T Consensus 144 di~p~nill~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di 204 (277)
T cd05032 144 DLAARNCMVAED-------LTVKIGDFGMTRDIYETDYY--------RKGGKGLLPVRWMAPESLKD----GVFTTKSDV 204 (277)
T ss_pred ccChheEEEcCC-------CCEEECCcccchhhccCccc--------ccCCCCCccccccCHHHHhc----CCCCcccch
Confidence 999999999887 78999999998754332110 01123346788999999865 457899999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1034 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1034 wSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
|||||++|||++ |..||.+.+..+....+..+..+..+. ..+..+.+++.+|
T Consensus 205 ~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~ 257 (277)
T cd05032 205 WSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPE---------------------------NCPDKLLELMRMC 257 (277)
T ss_pred HHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHH
Confidence 999999999998 999998777766665554333222111 3356789999999
Q ss_pred cccCCCCCCCHHHHHHHHH
Q 001142 1113 TEENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1113 L~~DP~~RPSa~EVL~~L~ 1131 (1142)
|+.+|++|||+.++++.+.
T Consensus 258 l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 258 WQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred cCCChhhCCCHHHHHHHhc
Confidence 9999999999999998763
No 179
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=4.1e-34 Score=316.38 Aligned_cols=269 Identities=25% Similarity=0.363 Sum_probs=205.3
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 880 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~ 880 (1142)
...++|++.+.||+|++|.||+|.+. +..+++|+..... ...+.+ .+|+.+++++ .||||+++++++.
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~----~~e~~~l~~~~~h~~i~~~~~~~~ 73 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEEI----KEEYNILRKYSNHPNIATFYGAFI 73 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-----hhHHHH----HHHHHHHHHhcCCCChheEEEEEE
Confidence 34578999999999999999999984 4567777754321 122334 7899999999 6999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
..... ....+.++||||+++++|.+++...... ...+++..+..++.|++.||.|||++|++|+||+|+||
T Consensus 74 ~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni 144 (275)
T cd06608 74 KKNPP--------GNDDQLWLVMELCGGGSVTDLVKGLRKK-GKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNI 144 (275)
T ss_pred ecCCC--------CcceEEEEEEEcCCCCcHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHE
Confidence 64420 1233579999999999999998764322 35689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGvi 1039 (1142)
+++.+ +.++|+|||.+........ ......|++.|+|||++.... ....++.++|||||||+
T Consensus 145 ~~~~~-------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~i 207 (275)
T cd06608 145 LLTKN-------AEVKLVDFGVSAQLDSTLG----------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGIT 207 (275)
T ss_pred EEccC-------CeEEECCCccceecccchh----------hhcCccccccccCHhHhcccccccCCccccccHHHhHHH
Confidence 99887 7899999999865432111 112345899999999986422 23457789999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|+|++|+.||...........+.....+... .....+..+.+++.+||..||.+
T Consensus 208 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~dp~~ 262 (275)
T cd06608 208 AIELADGKPPLCDMHPMRALFKIPRNPPPTLK-------------------------SPENWSKKFNDFISECLIKNYEQ 262 (275)
T ss_pred HHHHHhCCCCccccchHHHHHHhhccCCCCCC-------------------------chhhcCHHHHHHHHHHhhcChhh
Confidence 99999999999765444433333322211111 00134567999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001142 1120 RPTAGDLYEMFVA 1132 (1142)
Q Consensus 1120 RPSa~EVL~~L~~ 1132 (1142)
|||+.++++|+|.
T Consensus 263 Rpt~~~ll~~~~~ 275 (275)
T cd06608 263 RPFMEELLEHPFI 275 (275)
T ss_pred CcCHHHHhcCCCC
Confidence 9999999999984
No 180
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-35 Score=351.60 Aligned_cols=268 Identities=23% Similarity=0.340 Sum_probs=202.8
Q ss_pred CcceeeeecccCceEEEEEEEC-C-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeee-EecCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG-S-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGH-KISSK 883 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~-~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~-~~~~~ 883 (1142)
++++.++|.+|||+.||+|... + ..+|+|..... .....+.+ .+||.+|++|+ |+|||.+++. .....
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~----de~~L~~v----~~EI~~MK~L~gh~nIV~yidss~~~~~ 109 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN----DEEALNAV----KREIDIMKLLSGHKNIVSYIDSSAINRS 109 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC----CHHHHHHH----HHHHHHHHHhcCCCceeeEecccccccc
Confidence 4699999999999999999984 3 67888865433 33444444 89999999997 9999999994 32211
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL 961 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g--IvHrDLKp~NIL 961 (1142)
......++.|.||||+||+|-+++..... ..|++.++++|++|+++|+.+||..+ |||||||-+|||
T Consensus 110 --------~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq---~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvL 178 (738)
T KOG1989|consen 110 --------SNNGVWEVLLLMEYCKGGSLVDFMNTRLQ---TRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVL 178 (738)
T ss_pred --------CCCceeEEEeehhhccCCcHHHHHHHHHh---ccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheE
Confidence 11124578999999999999999986332 34999999999999999999999886 999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccc-ccc--ccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFL-HTC--CIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~-~~~--~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|..+ +.+||||||.|....... ... ...+. .-....|+.|+|||++.-+ .+...++|+|||||||
T Consensus 179 ls~~-------g~~KLCDFGSatt~~~~~~~~~e~~~ve~----eI~k~TTp~YRsPEMIDly-sg~pI~eKsDIWALGc 246 (738)
T KOG1989|consen 179 LSAD-------GNYKLCDFGSATTKILSPTSAQEVNYVEE----EIEKYTTPQYRSPEMIDLY-SGLPIGEKSDIWALGC 246 (738)
T ss_pred EcCC-------CCEEeCcccccccccCCCccHHHHHHHHH----HHHhhCCccccChHHHhhh-cCCCCcchhHHHHHHH
Confidence 9988 789999999996422111 000 00000 0122479999999998643 3567899999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1039 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+||.|+..+.||.+..... |..+.. ..|.. ..+++.+.+||+.||+.||.
T Consensus 247 lLYkLCy~t~PFe~sg~la----Ilng~Y-------------------------~~P~~-p~ys~~l~~LI~~mL~~nP~ 296 (738)
T KOG1989|consen 247 LLYKLCYFTTPFEESGKLA----ILNGNY-------------------------SFPPF-PNYSDRLKDLIRTMLQPNPD 296 (738)
T ss_pred HHHHHHHhCCCcCcCccee----EEeccc-------------------------cCCCC-ccHHHHHHHHHHHHhccCcc
Confidence 9999999999998653322 222211 01111 16778899999999999999
Q ss_pred CCCCHHHHHHHHHhhcCC
Q 001142 1119 ERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ss 1136 (1142)
+||++.+|+.+++.....
T Consensus 297 ~RPnI~Qv~~~~~~l~~~ 314 (738)
T KOG1989|consen 297 ERPNIYQVLEEIFELANK 314 (738)
T ss_pred cCCCHHHHHHHHHHHhcC
Confidence 999999999998876543
No 181
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2e-34 Score=323.94 Aligned_cols=259 Identities=22% Similarity=0.309 Sum_probs=196.3
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|+..++||+|+||.||+|.+. +..+|+|....... ... .....+.+|+.++++++|+||+.+++.+.+.+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~--~~~---~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-- 73 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKR---KGESMALNEKQILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhc--cch---HHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC--
Confidence 3778899999999999999985 55677776432211 111 11122368999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++... +...+++..+..++.|++.||.|||+.||+||||||+||+++.+
T Consensus 74 ------------~~~lv~e~~~g~~L~~~l~~~---~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~ 138 (285)
T cd05630 74 ------------ALCLVLTLMNGGDLKFHIYHM---GEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDH 138 (285)
T ss_pred ------------EEEEEEEecCCCcHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC
Confidence 349999999999999988652 23458999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++....... ......|+..|+|||++.+ ..++.++|||||||++|+|++
T Consensus 139 -------~~~~l~Dfg~~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslG~~l~~l~~ 196 (285)
T cd05630 139 -------GHIRISDLGLAVHVPEGQ-----------TIKGRVGTVGYMAPEVVKN----ERYTFSPDWWALGCLLYEMIA 196 (285)
T ss_pred -------CCEEEeeccceeecCCCc-----------cccCCCCCccccChHHHcC----CCCCCccccHHHHHHHHHHHh
Confidence 779999999986543211 0112368999999999875 567899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC---
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT--- 1122 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS--- 1122 (1142)
|+.||................. .... .. ....++.+.+|+.+||+.||.+|||
T Consensus 197 g~~Pf~~~~~~~~~~~~~~~~~-~~~~------------------~~-----~~~~~~~~~~li~~~l~~~p~~R~s~~~ 252 (285)
T cd05630 197 GQSPFQQRKKKIKREEVERLVK-EVQE------------------EY-----SEKFSPDARSLCKMLLCKDPKERLGCQG 252 (285)
T ss_pred CCCCCCCCCccchHHHHHhhhh-hhhh------------------hc-----CccCCHHHHHHHHHHhhcCHHHccCCCC
Confidence 9999986432111111110000 0000 00 0134566899999999999999999
Q ss_pred --HHHHHHHHHhhc
Q 001142 1123 --AGDLYEMFVART 1134 (1142)
Q Consensus 1123 --a~EVL~~L~~~~ 1134 (1142)
+.|+++|+|+..
T Consensus 253 ~~~~~~~~h~~~~~ 266 (285)
T cd05630 253 GGAREVKEHPLFKQ 266 (285)
T ss_pred CchHHHHcChhhhc
Confidence 999999999975
No 182
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=5.2e-34 Score=319.06 Aligned_cols=268 Identities=26% Similarity=0.384 Sum_probs=200.1
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 880 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~ 880 (1142)
...++|++.+.||+|+||.||+|.+ .+..+++|+.... ......+ ..|+.+++++ +||||+++++++.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-----~~~~~~~----~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-----HDIDEEI----EAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-----cchHHHH----HHHHHHHHHHhcCCCeeeeeeeee
Confidence 3467899999999999999999987 4567788864311 1111233 6799999999 6999999999876
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
.... ......++||||+++++|.+++...... ...+++..+..++.|++.||.|||+++|+||||||+||
T Consensus 86 ~~~~---------~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~ni 155 (286)
T cd06638 86 KKDV---------KNGDQLWLVLELCNGGSVTDLVKGFLKR-GERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNI 155 (286)
T ss_pred eccc---------CCCCeEEEEEeecCCCCHHHHHHHhhcc-CccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhE
Confidence 4221 0123569999999999999988753222 34689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGvi 1039 (1142)
+++.+ +.++|+|||++........ ......|++.|+|||++.... ....++.++|||||||+
T Consensus 156 li~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi 218 (286)
T cd06638 156 LLTTE-------GGVKLVDFGVSAQLTSTRL----------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGIT 218 (286)
T ss_pred EECCC-------CCEEEccCCceeecccCCC----------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHH
Confidence 99887 6799999999876532110 112345899999999985321 12457889999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|+|++|+.||...........+.....+... .+ ...+..+.+++.+||+.||++
T Consensus 219 ~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~---~~~~~~~~~li~~~l~~~p~~ 273 (286)
T cd06638 219 AIELGDGDPPLADLHPMRALFKIPRNPPPTLH----------------------QP---ELWSNEFNDFIRKCLTKDYEK 273 (286)
T ss_pred HHHHhcCCCCCCCCchhHHHhhccccCCCccc----------------------CC---CCcCHHHHHHHHHHccCCccc
Confidence 99999999999865543322222111111100 00 023456899999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001142 1120 RPTAGDLYEMFVA 1132 (1142)
Q Consensus 1120 RPSa~EVL~~L~~ 1132 (1142)
|||+.|+++|+|+
T Consensus 274 Rps~~ell~~~~~ 286 (286)
T cd06638 274 RPTVSDLLQHVFI 286 (286)
T ss_pred CCCHHHHhhcccC
Confidence 9999999999985
No 183
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.4e-34 Score=332.01 Aligned_cols=250 Identities=22% Similarity=0.339 Sum_probs=191.3
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.||+|+||.||+|+.. +..+|+|+...+... .....+ .+.+|+.++.++ +||||+++++++.+.+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~----~~~~e~~~~~~~~~~~~i~~~~~~~~~~~------ 69 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVH-DDEDID----WVQTEKHVFEQASSNPFLVGLHSCFQTTS------ 69 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHH----HHHHHHHHHHhhcCCCCEeeEEEEEEeCC------
Confidence 47999999999999874 566788876432211 112222 237899999888 5999999999987654
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
+.++||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~---- 132 (327)
T cd05617 70 --------RLFLVIEYVNGGDLMFHMQR-----QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDAD---- 132 (327)
T ss_pred --------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCC----
Confidence 35999999999999998865 2469999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~ell~g~~p 195 (327)
T cd05617 133 ---GHIKLTDYGMCKEGLGPGD----------TTSTFCGTPNYIAPEILRG----EEYGFSVDWWALGVLMFEMMAGRSP 195 (327)
T ss_pred ---CCEEEeccccceeccCCCC----------ceecccCCcccCCHHHHCC----CCCCchheeehhHHHHHHHHhCCCC
Confidence 7899999999864221110 1123468999999999875 5678999999999999999999999
Q ss_pred CCCCC------HH-HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1050 YMGLS------EL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1050 f~~~~------~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|.... .. .....+... ...++ ...+..+.+++.+||+.||.+|++
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~~~-~~~~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~ 247 (327)
T cd05617 196 FDIITDNPDMNTEDYLFQVILEK-PIRIP---------------------------RFLSVKASHVLKGFLNKDPKERLG 247 (327)
T ss_pred CCccCCCcccccHHHHHHHHHhC-CCCCC---------------------------CCCCHHHHHHHHHHhccCHHHcCC
Confidence 96321 11 122222111 11111 134556899999999999999998
Q ss_pred ------HHHHHHHHHhhcC
Q 001142 1123 ------AGDLYEMFVARTS 1135 (1142)
Q Consensus 1123 ------a~EVL~~L~~~~s 1135 (1142)
+.++++|+|+..-
T Consensus 248 ~~~~~~~~~i~~h~~f~~~ 266 (327)
T cd05617 248 CQPQTGFSDIKSHTFFRSI 266 (327)
T ss_pred CCCCCCHHHHHcCCCCCCC
Confidence 5799999998753
No 184
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.9e-34 Score=321.08 Aligned_cols=251 Identities=25% Similarity=0.420 Sum_probs=193.9
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||.||+|.+ .+..+|+|+..... .....+.+ .+|+.+++++.||||+++++++...+
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~- 72 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI---TVELQKQI----MSELEILYKCDSPYIIGFYGAFFVEN- 72 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC---ChHHHHHH----HHHHHHHHhCCCCCeeeEEEEEEECC-
Confidence 3678999999999999999987 45667777754321 22222333 78999999999999999999998755
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|..+. .+++..+..++.|++.||.|||+.||+|+||||+|||++.
T Consensus 73 -------------~~~lv~e~~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~ 130 (279)
T cd06619 73 -------------RISICTEFMDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT 130 (279)
T ss_pred -------------EEEEEEecCCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC
Confidence 348999999999986542 3688899999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||++....... .....||..|+|||++.+ ..++.++||||||+++|+|+
T Consensus 131 ~-------~~~~l~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~~l~ 187 (279)
T cd06619 131 R-------GQVKLCDFGVSTQLVNSI------------AKTYVGTNAYMAPERISG----EQYGIHSDVWSLGISFMELA 187 (279)
T ss_pred C-------CCEEEeeCCcceeccccc------------ccCCCCChhhcCceeecC----CCCCCcchHHHHHHHHHHHH
Confidence 7 789999999986543211 123468999999999875 45789999999999999999
Q ss_pred hCCCCCCCCCHH-------HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1045 TLQVPYMGLSEL-------EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1045 tG~~Pf~~~~~~-------el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+|+.||...... .....+.....+.. .....++.+.+++.+||+.||
T Consensus 188 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~~P 241 (279)
T cd06619 188 LGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVL--------------------------PVGQFSEKFVHFITQCMRKQP 241 (279)
T ss_pred hCCCCchhhcccccccchHHHHHHHhccCCCCC--------------------------CCCcCCHHHHHHHHHHhhCCh
Confidence 999999642211 11111111100000 001345678999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001142 1118 TERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~ss 1136 (1142)
++||+++|+++|+|+....
T Consensus 242 ~~Rp~~~eil~~~~~~~~~ 260 (279)
T cd06619 242 KERPAPENLMDHPFIVQYN 260 (279)
T ss_pred hhCCCHHHHhcCccccccc
Confidence 9999999999999987553
No 185
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.4e-34 Score=315.10 Aligned_cols=265 Identities=24% Similarity=0.394 Sum_probs=204.3
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||.|+||+||+|.+ .+..+++|+...... . ...+.+ .+|+.+++.++|+||+++++.+....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~-~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~- 72 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--Q-TSVDEL----RKEVQAMSQCNHPNVVKYYTSFVVGD- 72 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc--c-hHHHHH----HHHHHHHHhcCCCCEEEEEEEEeeCC-
Confidence 4689999999999999999987 455677776543221 1 133344 78999999999999999999887654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.++++.... ...+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 73 -------------~~~iv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~ 137 (267)
T cd06610 73 -------------ELWLVMPYLSGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE 137 (267)
T ss_pred -------------EEEEEEeccCCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC
Confidence 35999999999999999976321 245899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||++..+....... ........|+..|+|||++... ..++.++|||||||++|+|+
T Consensus 138 ~-------~~~~l~df~~~~~~~~~~~~~------~~~~~~~~~~~~y~~Pe~~~~~---~~~~~~~Dv~slG~i~~~l~ 201 (267)
T cd06610 138 D-------GSVKIADFGVSASLADGGDRT------RKVRKTFVGTPCWMAPEVMEQV---HGYDFKADIWSFGITAIELA 201 (267)
T ss_pred C-------CCEEEcccchHHHhccCcccc------ccccccccCChhhcChHHHccc---cCcCcccchHhHhHHHHHHH
Confidence 7 789999999987654422110 0112344689999999998752 35789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|+.||...+..+....+.....+..... ......+..+.+++.+||+.||++||++.
T Consensus 202 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 259 (267)
T cd06610 202 TGAAPYSKYPPMKVLMLTLQNDPPSLETG----------------------ADYKKYSKSFRKMISLCLQKDPSKRPTAE 259 (267)
T ss_pred hCCCCccccChhhhHHHHhcCCCCCcCCc----------------------cccccccHHHHHHHHHHcCCChhhCcCHH
Confidence 99999987665544444333222111100 00114566789999999999999999999
Q ss_pred HHHHHHHh
Q 001142 1125 DLYEMFVA 1132 (1142)
Q Consensus 1125 EVL~~L~~ 1132 (1142)
++++|+|+
T Consensus 260 ~ll~~p~~ 267 (267)
T cd06610 260 ELLKHKFF 267 (267)
T ss_pred HHhhCCCC
Confidence 99999986
No 186
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.7e-34 Score=319.93 Aligned_cols=263 Identities=25% Similarity=0.407 Sum_probs=199.4
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~ 883 (1142)
..|++.+.||+|+||.||+|.+ .+..+++|+.... ......+ ..|+.+++++ +||||+++++++....
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-----~~~~~~~----~~e~~~l~~~~~h~~i~~~~~~~~~~~ 86 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----EDEEEEI----KLEINMLKKYSHHRNIATYYGAFIKKS 86 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-----hHHHHHH----HHHHHHHHHhcCCCcEEEEeeehhccc
Confidence 5789999999999999999998 4566777775432 1222233 6899999998 6999999999986432
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
........++||||+++++|.+++... ....+++..+..++.||+.||.|||++||+|+||||+||+++
T Consensus 87 --------~~~~~~~~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~ 155 (282)
T cd06636 87 --------PPGHDDQLWLVMEFCGAGSVTDLVKNT---KGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT 155 (282)
T ss_pred --------ccCCCCEEEEEEEeCCCCcHHHHHHHc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 111233679999999999999998752 234588889999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL~E 1042 (1142)
.+ +.++|+|||.+........ ......|++.|+|||++.... ....++.++|||||||++|+
T Consensus 156 ~~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~e 218 (282)
T cd06636 156 EN-------AEVKLVDFGVSAQLDRTVG----------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIE 218 (282)
T ss_pred CC-------CCEEEeeCcchhhhhcccc----------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHH
Confidence 77 7799999999865432110 122346899999999975321 12457889999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|..||...........+.....+... ....+..+.++|.+||+.||.+|||
T Consensus 219 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~cl~~~p~~Rp~ 272 (282)
T cd06636 219 MAEGAPPLCDMHPMRALFLIPRNPPPKLK--------------------------SKKWSKKFIDFIEGCLVKNYLSRPS 272 (282)
T ss_pred HHhCCCCccccCHHhhhhhHhhCCCCCCc--------------------------ccccCHHHHHHHHHHhCCChhhCcC
Confidence 99999999765543333222211111100 0134567999999999999999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
+.|+++|+|+
T Consensus 273 ~~ell~~~~~ 282 (282)
T cd06636 273 TEQLLKHPFI 282 (282)
T ss_pred HHHHhcCCCC
Confidence 9999999985
No 187
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=4.8e-34 Score=320.78 Aligned_cols=291 Identities=18% Similarity=0.220 Sum_probs=202.1
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~ 883 (1142)
++|++.+.||+|+||.||+|.+ .+..+++|+...... ....... +.+|+.+++++. ||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~--~~~~~~~----~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD--EEGIPPT----ALREISLLQMLSESIYIVRLLDVEHVEE 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc--ccCCchH----HHHHHHHHHHccCCCCccceeeeEeecC
Confidence 3689999999999999999997 456788887544321 1111122 368999999995 799999999887644
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. .....|+||||++ ++|.+++..........+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 75 ~~---------~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~ 144 (295)
T cd07837 75 KN---------GKPSLYLVFEYLD-SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVD 144 (295)
T ss_pred CC---------CCceEEEEeeccC-cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEe
Confidence 21 1234699999998 5899988764332235689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+. +.+||+|||.+........ ......+++.|+|||++.+ ...++.++||||||+++|+|
T Consensus 145 ~~~------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~~l~~l 205 (295)
T cd07837 145 KQK------GLLKIADLGLGRAFSIPVK----------SYTHEIVTLWYRAPEVLLG---STHYSTPVDIWSVGCIFAEM 205 (295)
T ss_pred cCC------CeEEEeecccceecCCCcc----------ccCCcccccCCCChHHhhC---CCCCCchHHHHHHHHHHHHH
Confidence 721 7899999999875432111 1112246888999999864 24578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++|..||.+.+..+....+.. ...+.. ..+...........................+..+.++|.+||+.||.+||+
T Consensus 206 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~ 284 (295)
T cd07837 206 SRKQPLFPGDSELQQLLHIFKLLGTPTE-QVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRIS 284 (295)
T ss_pred HcCCCCCCCCCHHHHHHHHHHHhCCCCh-hhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCC
Confidence 999999987665554333322 111110 000000000000000000000000011145677999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001142 1123 AGDLYEMFVAR 1133 (1142)
Q Consensus 1123 a~EVL~~L~~~ 1133 (1142)
+.|++.|+|+.
T Consensus 285 ~~eil~~~~~~ 295 (295)
T cd07837 285 AKAALTHPYFD 295 (295)
T ss_pred HHHHhcCCCcC
Confidence 99999999974
No 188
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.2e-34 Score=312.85 Aligned_cols=258 Identities=27% Similarity=0.410 Sum_probs=201.5
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|.+. +..+++|+...... ...+.+ .+|+.++++++||||+++++++....
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~----~~e~~~l~~~~h~~i~~~~~~~~~~~- 73 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG----DDFEII----QQEISMLKECRHPNIVAYFGSYLRRD- 73 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch----hhHHHH----HHHHHHHHhCCCCChhceEEEEEeCC-
Confidence 57999999999999999999973 56788888654321 123333 78999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..+++|||+++++|.+++... ...+++..+..++.|++.||.|||++||+|+||||+||+++.
T Consensus 74 -------------~~~l~~e~~~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~ 136 (262)
T cd06613 74 -------------KLWIVMEYCGGGSLQDIYQVT----RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTE 136 (262)
T ss_pred -------------EEEEEEeCCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECC
Confidence 359999999999999998752 246899999999999999999999999999999999999997
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||.+........ ......++..|+|||.+.... ...++.++||||||+++|+|+
T Consensus 137 ~-------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~y~~Pe~~~~~~-~~~~~~~~Di~slG~~l~~~~ 198 (262)
T cd06613 137 D-------GDVKLADFGVSAQLTATIA----------KRKSFIGTPYWMAPEVAAVER-KGGYDGKCDIWALGITAIELA 198 (262)
T ss_pred C-------CCEEECccccchhhhhhhh----------ccccccCCccccCchhhcccc-cCCcCchhhhHHHHHHHHHHH
Confidence 7 7899999999875443211 112345888999999986521 136778999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|+.||...........+......... .......+..+.+++.+||..||.+|||+.
T Consensus 199 tg~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ 255 (262)
T cd06613 199 ELQPPMFDLHPMRALFLISKSNFPPPK-----------------------LKDKEKWSPVFHDFIKKCLTKDPKKRPTAT 255 (262)
T ss_pred hCCCCCCCCCHHHHHHHHHhccCCCcc-----------------------ccchhhhhHHHHHHHHHHcCCChhhCCCHH
Confidence 999999876655444333222111000 000114566799999999999999999999
Q ss_pred HHHHHHH
Q 001142 1125 DLYEMFV 1131 (1142)
Q Consensus 1125 EVL~~L~ 1131 (1142)
+|+.|.|
T Consensus 256 ~il~~~~ 262 (262)
T cd06613 256 KLLQHPF 262 (262)
T ss_pred HHhcCCC
Confidence 9999876
No 189
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-34 Score=356.22 Aligned_cols=268 Identities=25% Similarity=0.399 Sum_probs=214.6
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEEC---Cc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCcccee
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKFG---SA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMY 876 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~---~~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~ 876 (1142)
+.......++.+.||+|+||.||.|.+. +. ++.|++|.++... ...+..+| ++|..+|+++.|||||+++
T Consensus 687 p~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~F----l~Ea~~m~~f~HpNiv~li 761 (1025)
T KOG1095|consen 687 PEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDF----LKEALLMSKFDHPNIVSLI 761 (1025)
T ss_pred ccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHH----HHHHHHHhcCCCcceeeEE
Confidence 3345556789999999999999999872 22 5667777676532 34455566 8999999999999999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001142 877 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG--EKHVSVKLALFIAQDVAAALVELHSKHIMHRD 954 (1142)
Q Consensus 877 g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~--~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrD 954 (1142)
|.+.+... .+|++|||+||+|..+|++.+... ...++..+.+.++.|||+|+.||+++++||||
T Consensus 762 Gv~l~~~~--------------~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRD 827 (1025)
T KOG1095|consen 762 GVCLDSGP--------------PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRD 827 (1025)
T ss_pred EeecCCCC--------------cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcc
Confidence 99987543 399999999999999999753221 34689999999999999999999999999999
Q ss_pred CCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHH
Q 001142 955 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIW 1034 (1142)
Q Consensus 955 LKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVw 1034 (1142)
|-+.|+|++.. .+|||+|||+|+.+-..... ... ....-...|||||.+.. ..++.|+|||
T Consensus 828 LAaRNCLL~~~-------r~VKIaDFGlArDiy~~~yy---r~~-----~~a~lPvkWm~PEsl~d----~iFtskSDvW 888 (1025)
T KOG1095|consen 828 LAARNCLLDER-------RVVKIADFGLARDIYDKDYY---RKH-----GEAMLPVKWMPPESLKD----GIFTSKSDVW 888 (1025)
T ss_pred hhhhheeeccc-------CcEEEcccchhHhhhhchhe---ecc-----CccccceecCCHHHHhh----cccccccchh
Confidence 99999999987 89999999999843322211 111 11123467999999986 6789999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1035 SYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1035 SLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
||||++||++| |..||.+.+..++...+..+.+...+. .+++.+.+++..||
T Consensus 889 sFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~---------------------------~CP~~ly~lM~~CW 941 (1025)
T KOG1095|consen 889 SFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPS---------------------------YCPEKLYQLMLQCW 941 (1025)
T ss_pred hhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCC---------------------------CCChHHHHHHHHHc
Confidence 99999999999 899999988888887665554332221 67778999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhc
Q 001142 1114 EENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
+.+|++||++..|++.+....
T Consensus 942 ~~~pe~RP~F~~i~~q~~~i~ 962 (1025)
T KOG1095|consen 942 KHDPEDRPSFRTIVEQDPAIS 962 (1025)
T ss_pred cCChhhCccHHHHHhhhhhhh
Confidence 999999999999999765543
No 190
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=5e-34 Score=321.01 Aligned_cols=261 Identities=28% Similarity=0.448 Sum_probs=201.5
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+.|++.++||+|+||.||+|++. +..+++|+.... .....+.+ .+|+.++++++||||+++++.+..+.
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~----~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~- 82 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDY----MVEIEILATCNHPYIVKLLGAFYWDG- 82 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC----CHHHHHHH----HHHHHHHHhCCCCcEeeeEEEEEeCC-
Confidence 56899999999999999999984 456666664322 22333444 78999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|..++.+. ...+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 83 -------------~~~lv~e~~~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~ 145 (292)
T cd06644 83 -------------KLWIMIEFCPGGAVDAIMLEL----DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL 145 (292)
T ss_pred -------------eEEEEEecCCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC
Confidence 349999999999998887642 245899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL~EL 1043 (1142)
+ +.++|+|||.+........ ......+++.|+|||++.+.. ....++.++|||||||++|+|
T Consensus 146 ~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el 208 (292)
T cd06644 146 D-------GDIKLADFGVSAKNVKTLQ----------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208 (292)
T ss_pred C-------CCEEEccCccceecccccc----------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHH
Confidence 6 7899999998864322110 112345788999999985421 234578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..||...........+.....+.... ....+..+.+++.+||+.||++||++
T Consensus 209 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~ 263 (292)
T cd06644 209 AQIEPPHHELNPMRVLLKIAKSEPPTLSQ-------------------------PSKWSMEFRDFLKTALDKHPETRPSA 263 (292)
T ss_pred hcCCCCCccccHHHHHHHHhcCCCccCCC-------------------------CcccCHHHHHHHHHHhcCCcccCcCH
Confidence 99999998765544443433222211110 01344568999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.++++|+|+..-
T Consensus 264 ~~il~~~~~~~~ 275 (292)
T cd06644 264 AQLLEHPFVSSV 275 (292)
T ss_pred HHHhcCcccccc
Confidence 999999998753
No 191
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=7.3e-34 Score=313.91 Aligned_cols=252 Identities=23% Similarity=0.389 Sum_probs=197.5
Q ss_pred CCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.+|++.+.||+|++|.||+|.+. +..+++|..+ .... ..+++ .+|+.++++++||||+++++++...+.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~--~~~~---~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~- 75 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLK--PGTM---DPKDF----LAEAQIMKKLRHPKLIQLYAVCTLEEP- 75 (261)
T ss_pred hheeeEEEecccCCccEEEEEecCCeEEEEEeeC--CCcc---cHHHH----HHHHHHHHHCCCCCccceeEEEecCCC-
Confidence 46899999999999999999874 4457777643 2111 12334 789999999999999999999876543
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.++||||+++++|.+++... ....+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus 76 -------------~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~ 139 (261)
T cd05068 76 -------------IYIVTELMKYGSLLEYLQGG---AGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGEN 139 (261)
T ss_pred -------------eeeeeecccCCcHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCC
Confidence 49999999999999999752 23468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++......... .......+..|+|||++.+ ..++.++||||||+++|||++
T Consensus 140 -------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~el~t 199 (261)
T cd05068 140 -------NICKVADFGLARVIKEDIYE---------AREGAKFPIKWTAPEAALY----NRFSIKSDVWSFGILLTEIVT 199 (261)
T ss_pred -------CCEEECCcceEEEccCCccc---------ccCCCcCceeccCcccccc----CCCCchhhHHHHHHHHHHHHh
Confidence 78999999999765421110 0011123457999998865 567899999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|+.||.+.........+........+ ...+..+.+++.+||+.+|.+||++.
T Consensus 200 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~P~~Rp~~~ 252 (261)
T cd05068 200 YGRMPYPGMTNAEVLQQVDQGYRMPCP---------------------------PGCPKELYDIMLDCWKEDPDDRPTFE 252 (261)
T ss_pred cCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CcCCHHHHHHHHHHhhcCcccCCCHH
Confidence 99999887766665555433211110 13456799999999999999999999
Q ss_pred HHHHHHH
Q 001142 1125 DLYEMFV 1131 (1142)
Q Consensus 1125 EVL~~L~ 1131 (1142)
++++.+.
T Consensus 253 ~l~~~l~ 259 (261)
T cd05068 253 TLQWKLE 259 (261)
T ss_pred HHHHHHh
Confidence 9998764
No 192
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=3.9e-34 Score=330.09 Aligned_cols=261 Identities=24% Similarity=0.373 Sum_probs=197.4
Q ss_pred CCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeee
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGH 878 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~ 878 (1142)
++|++.++||+|+||.||+|.+.+ ..+|+|+++.. ......+.+ .+|+.++.++ +||||++++++
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~----~~E~~~~~~l~~h~niv~~~~~ 79 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEG---ATASEYKAL----MTELKILIHIGHHLNVVNLLGA 79 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCC---CCHHHHHHH----HHHHHHHHhhccCcchhheeee
Confidence 479999999999999999997532 46888875422 122223333 6899999999 79999999998
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-------------------------------------
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------------------------- 921 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~------------------------------------- 921 (1142)
+...+. ..++||||+++++|.+++......
T Consensus 80 ~~~~~~-------------~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (337)
T cd05054 80 CTKPGG-------------PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSG 146 (337)
T ss_pred EecCCC-------------CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccc
Confidence 865331 358999999999999998642110
Q ss_pred -------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCC
Q 001142 922 -------------------GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDR 982 (1142)
Q Consensus 922 -------------------~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGl 982 (1142)
....+++..+..++.||+.||+|||++||+||||||+|||++.+ +.++|+|||+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~-------~~vkL~DfG~ 219 (337)
T cd05054 147 FIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN-------NVVKICDFGL 219 (337)
T ss_pred cccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC-------CcEEEecccc
Confidence 01368999999999999999999999999999999999999876 7899999999
Q ss_pred cccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-HHH
Q 001142 983 AVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-IHD 1060 (1142)
Q Consensus 983 A~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~e-l~~ 1060 (1142)
+..+...... .......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+ ...
T Consensus 220 a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~ 287 (337)
T cd05054 220 ARDIYKDPDY--------VRKGDARLPLKWMAPESIFD----KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCR 287 (337)
T ss_pred chhcccCcch--------hhccCCCCCccccCcHHhcC----CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHH
Confidence 9765321110 01123346778999999876 568899999999999999998 999997643332 222
Q ss_pred HHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1061 LIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1061 ~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.+..+..+..+ ...++.+.+++.+||+.+|++||++.|+++++...
T Consensus 288 ~~~~~~~~~~~---------------------------~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 288 RLKEGTRMRAP---------------------------EYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHhccCCCCCC---------------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 33222211110 13445689999999999999999999999998754
No 193
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.1e-34 Score=324.23 Aligned_cols=279 Identities=23% Similarity=0.303 Sum_probs=199.5
Q ss_pred CCcceeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||.||++.+.. ..+++|+...+ ..... ...+.+|++++.+++||||+++++++.+++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~---~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 72 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE---IKPAI----RNQIIRELKVLHECNSPYIVGFYGAFYSDG- 72 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc---cCHHH----HHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-
Confidence 368999999999999999999854 44555553322 11222 223478999999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeeec
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILID 963 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NILld 963 (1142)
+.++||||+++++|.++++. ...+++..+..++.||+.||.|||+ .+++||||||+|||++
T Consensus 73 -------------~~~lv~ey~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~ 134 (308)
T cd06615 73 -------------EISICMEHMDGGSLDQVLKK-----AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN 134 (308)
T ss_pred -------------EEEEEeeccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe
Confidence 34999999999999999976 2468999999999999999999997 5999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||.+...... ......|++.|+|||.+.+ ..++.++||||||+++|+|
T Consensus 135 ~~-------~~~~l~dfg~~~~~~~~------------~~~~~~~~~~~~aPE~~~~----~~~~~~~DiwslG~~l~~l 191 (308)
T cd06615 135 SR-------GEIKLCDFGVSGQLIDS------------MANSFVGTRSYMSPERLQG----THYTVQSDIWSLGLSLVEM 191 (308)
T ss_pred cC-------CcEEEccCCCccccccc------------ccccCCCCcCccChhHhcC----CCCCccchHHHHHHHHHHH
Confidence 77 78999999998644221 1123468899999999865 4578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHh--hhccc-cc-------cccccc-CCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELE--ALGSC-HE-------HEVAQS-GSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~--~~~~~-~~-------~~~~~~-~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
++|+.||...........+..... ....... ..... .. ....+. .............+.++.+++.+|
T Consensus 192 ~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 270 (308)
T cd06615 192 AIGRYPIPPPDAKELEAMFGRPVS-EGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKC 270 (308)
T ss_pred HhCCCCCCCcchhhHHHhhcCccc-cccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHH
Confidence 999999976554433333221110 0000000 00000 00 000000 000000000012466799999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhcC
Q 001142 1113 TEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1113 L~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
|..||++|||+.+|++|+|+...
T Consensus 271 l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 271 LKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred ccCChhhCcCHHHHhcChhhhhc
Confidence 99999999999999999999764
No 194
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.9e-34 Score=319.48 Aligned_cols=261 Identities=24% Similarity=0.379 Sum_probs=201.3
Q ss_pred CCCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g 877 (1142)
..+|++.+.||+|+||.||++.+.+ ..+++|+.... ........+ .+|+.+++++ +||||+++++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~---~~~~~~~~~----~~E~~~l~~l~~h~~i~~~~~ 83 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD---ATEKDLSDL----VSEMEMMKMIGKHKNIINLLG 83 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCC---CCHHHHHHH----HHHHHHHHhhcCCCCeeeEEE
Confidence 3568999999999999999998743 34666664321 122222333 7899999999 7999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----------cCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELH 946 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-----------~~~~~ls~~~i~~Ia~qIa~gL~yLH 946 (1142)
++..... .++||||+++++|.++++.... .....+++..+..++.|++.||+|||
T Consensus 84 ~~~~~~~--------------~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH 149 (293)
T cd05053 84 VCTQEGP--------------LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA 149 (293)
T ss_pred EEcCCCC--------------eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 9876543 4999999999999999975310 22356899999999999999999999
Q ss_pred hCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001142 947 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1026 (1142)
Q Consensus 947 s~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1026 (1142)
+++|+||||||+||+++.+ +.+||+|||.++.+...... .......++..|+|||++.+ ..
T Consensus 150 ~~~ivH~dlkp~Nil~~~~-------~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~ 210 (293)
T cd05053 150 SKKCIHRDLAARNVLVTED-------HVMKIADFGLARDIHHIDYY--------RKTTNGRLPVKWMAPEALFD----RV 210 (293)
T ss_pred HCCccccccceeeEEEcCC-------CeEEeCccccccccccccce--------eccCCCCCCccccCHHHhcc----CC
Confidence 9999999999999999877 78999999999765432110 00111234677999999865 56
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHH
Q 001142 1027 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1105 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1105 (1142)
++.++|||||||++|||++ |..||.+....+....+..+..+..+ ...+..+
T Consensus 211 ~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~ 263 (293)
T cd05053 211 YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKP---------------------------QNCTQEL 263 (293)
T ss_pred cCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHH
Confidence 7899999999999999998 99999887766666655443322111 1345568
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1106 VDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1106 ~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.+|+.+||..||.+|||+.|+++++...
T Consensus 264 ~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 264 YHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 9999999999999999999999988653
No 195
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=9e-34 Score=316.52 Aligned_cols=281 Identities=20% Similarity=0.245 Sum_probs=203.1
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|+||.||+|.+ .+..+++|+...... .....+.+ .+|+.++++++||||+++++++....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~----~~e~~~l~~~~~~~i~~~~~~~~~~~-- 72 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL--EGGIPNQA----LREIKALQACQHPYVVKLLDVFPHGS-- 72 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc--cchhhHHH----HHHHHHHHhCCCCCCcceeeEEecCC--
Confidence 588999999999999999997 466788887654321 12222333 78999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+ +++|.+++... ...+++..+..++.||+.||+|||++||+|+||||+||+++.+
T Consensus 73 ------------~~~~v~e~~-~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~ 135 (286)
T cd07832 73 ------------GFVLVMEYM-PSDLSEVLRDE----ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISAD 135 (286)
T ss_pred ------------eeEEEeccc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCC
Confidence 349999999 99999998752 2468999999999999999999999999999999999999886
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+........ .......|+..|+|||++.+ ...++.++||||+|+++|+|++
T Consensus 136 -------~~~~l~dfg~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~~l~~l~t 196 (286)
T cd07832 136 -------GVLKIADFGLARLFSEEEP---------RLYSHQVATRWYRAPELLYG---ARKYDPGVDLWAVGCIFAELLN 196 (286)
T ss_pred -------CcEEEeeeeecccccCCCC---------CccccccCcccccCceeeec---cccCCchhHHHHHHHHHHHHHc
Confidence 7899999999876543211 01123458899999999764 2456899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccc--ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE--HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
|.+||.+.........+...........+........ ...................+..+.+++.+||+.||.+|||+
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~ 276 (286)
T cd07832 197 GSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSA 276 (286)
T ss_pred CCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCH
Confidence 9988887665554444322111111111111000000 00000000000000111345789999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
++++.|+|+
T Consensus 277 ~~~l~h~~~ 285 (286)
T cd07832 277 AEALRHPYF 285 (286)
T ss_pred HHHhhCcCc
Confidence 999999997
No 196
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2e-34 Score=319.15 Aligned_cols=258 Identities=26% Similarity=0.396 Sum_probs=197.2
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||.||+|++ .+..+++|+.+... ......+ .+|+.+++.++||||+++++.+...+
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~----~~e~~~~~~l~h~~ii~~~~~~~~~~ 79 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP----GEDFAVV----QQEIIMMKDCKHSNIVAYFGSYLRRD 79 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc----hhHHHHH----HHHHHHHHhCCCCCeeeEEEEEEeCC
Confidence 34789999999999999999987 46677888754331 1222223 68999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++||+|+||||+||+++
T Consensus 80 --------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~ 140 (267)
T cd06645 80 --------------KLWICMEFCGGGSLQDIYHV-----TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT 140 (267)
T ss_pred --------------EEEEEEeccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC
Confidence 34999999999999999875 24689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+....... .......|+..|+|||++... ....++.++|||||||++|+|
T Consensus 141 ~~-------~~~~l~dfg~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~~DvwSlG~il~~l 202 (267)
T cd06645 141 DN-------GHVKLADFGVSAQITATI----------AKRKSFIGTPYWMAPEVAAVE-RKGGYNQLCDIWAVGITAIEL 202 (267)
T ss_pred CC-------CCEEECcceeeeEccCcc----------cccccccCcccccChhhhccc-cCCCCCchhhhHHHHHHHHHH
Confidence 77 789999999986543211 111234689999999997421 124578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..||...........+....... + .. ......+..+.+++.+||+.+|++||++
T Consensus 203 ~~~~~p~~~~~~~~~~~~~~~~~~~~-~-~~---------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~ 259 (267)
T cd06645 203 AELQPPMFDLHPMRALFLMTKSNFQP-P-KL---------------------KDKMKWSNSFHHFVKMALTKNPKKRPTA 259 (267)
T ss_pred hcCCCCcccccchhhHHhhhccCCCC-C-cc---------------------cccCCCCHHHHHHHHHHccCCchhCcCH
Confidence 99999997544333222221111000 0 00 0001334568999999999999999999
Q ss_pred HHHHHHHH
Q 001142 1124 GDLYEMFV 1131 (1142)
Q Consensus 1124 ~EVL~~L~ 1131 (1142)
+++++|+|
T Consensus 260 ~~ll~~~~ 267 (267)
T cd06645 260 EKLLQHPF 267 (267)
T ss_pred HHHhcCCC
Confidence 99999986
No 197
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.3e-34 Score=332.97 Aligned_cols=265 Identities=22% Similarity=0.288 Sum_probs=201.5
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||++++. +..+|+|+...... ...... ..+..|+.++..++|+||+++++++.+.+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~----~~~~~e~~~l~~~~~~~i~~l~~~~~~~~- 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEM-LKRAET----ACFREERNVLVNGDCQWITTLHYAFQDEN- 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHH-HhhHHH----HHHHHHHHHHHhCCCCCEeeEEEEEEcCC-
Confidence 47999999999999999999984 45678877532110 011112 22468899999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..|+||||++||+|.+++... ...+++..+..++.|++.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~Ey~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~ 137 (331)
T cd05624 75 -------------YLYLVMDYYVGGDLLTLLSKF----EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM 137 (331)
T ss_pred -------------EEEEEEeCCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC
Confidence 349999999999999999752 246899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC-CCCCchhhHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP-NLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~-~~~s~ksDVwSLGviL~EL 1043 (1142)
+ +.+||+|||++......... ......||+.|+|||++.+.... ..++.++|||||||++|+|
T Consensus 138 ~-------~~~kl~DfG~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~el 201 (331)
T cd05624 138 N-------GHIRLADFGSCLKMNQDGTV---------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 201 (331)
T ss_pred C-------CCEEEEeccceeeccCCCce---------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhh
Confidence 7 78999999998754321110 11234699999999998652211 3567899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--C
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE--R 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~--R 1120 (1142)
++|+.||...+..+....+.... ...++. .....++.+.+++.+|+..++.+ |
T Consensus 202 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~------------------------~~~~~~~~~~~li~~ll~~~~~~~~~ 257 (331)
T cd05624 202 LYGETPFYAESLVETYGKIMNHEERFQFPS------------------------HITDVSEEAKDLIQRLICSRERRLGQ 257 (331)
T ss_pred hhCCCCccCCCHHHHHHHHHcCCCcccCCC------------------------ccccCCHHHHHHHHHHccCchhhcCC
Confidence 99999998777666555553321 111110 00134567999999999876655 5
Q ss_pred CCHHHHHHHHHhhc
Q 001142 1121 PTAGDLYEMFVART 1134 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ 1134 (1142)
++++++++|+|+..
T Consensus 258 ~~~~~~~~h~~f~~ 271 (331)
T cd05624 258 NGIEDFKKHAFFEG 271 (331)
T ss_pred CCHHHHhcCCCcCC
Confidence 79999999999865
No 198
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.7e-34 Score=313.23 Aligned_cols=253 Identities=26% Similarity=0.411 Sum_probs=200.0
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||.||+|.+. +..+++|..... ...+.+ .+|++++++++||||+++++++.+..
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~------~~~~~~----~~e~~~~~~l~~~~i~~~~~~~~~~~ 71 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE------EDLQEI----IKEISILKQCDSPYIVKYYGSYFKNT 71 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH------HHHHHH----HHHHHHHHhCCCCcEeeeeeeeecCC
Confidence 357999999999999999999985 466777765422 113344 79999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
+.+++|||+++++|.+++.. ....+++..+..++.|++.||.|||+.+|+||||+|+||+++
T Consensus 72 --------------~~~l~~e~~~~~~L~~~l~~----~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~ 133 (256)
T cd06612 72 --------------DLWIVMEYCGAGSVSDIMKI----TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN 133 (256)
T ss_pred --------------cEEEEEecCCCCcHHHHHHh----CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC
Confidence 34999999999999999865 134689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+........ ......++..|+|||++.+ ..++.++||||||+++|+|
T Consensus 134 ~~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~s~G~il~~l 192 (256)
T cd06612 134 EE-------GQAKLADFGVSGQLTDTMA----------KRNTVIGTPFWMAPEVIQE----IGYNNKADIWSLGITAIEM 192 (256)
T ss_pred CC-------CcEEEcccccchhcccCcc----------ccccccCCccccCHHHHhc----CCCCchhhHHHHHHHHHHH
Confidence 87 7899999999876543211 1123457889999999876 4678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||...........+.....+... .....+..+.+++.+||+.||.+|||+
T Consensus 193 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~i~~~l~~~P~~Rps~ 247 (256)
T cd06612 193 AEGKPPYSDIHPMRAIFMIPNKPPPTLS-------------------------DPEKWSPEFNDFVKKCLVKDPEERPSA 247 (256)
T ss_pred HhCCCCCCCcchhhhhhhhccCCCCCCC-------------------------chhhcCHHHHHHHHHHHhcChhhCcCH
Confidence 9999999865544332222111111000 011345678999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.|+++|+|+
T Consensus 248 ~~il~~~~~ 256 (256)
T cd06612 248 IQLLQHPFI 256 (256)
T ss_pred HHHhcCCCC
Confidence 999999985
No 199
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2e-34 Score=335.03 Aligned_cols=271 Identities=19% Similarity=0.217 Sum_probs=190.0
Q ss_pred CCcceeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|++.+ ..+|+|+. ... .. ..|+.++++++||||+++++++.....
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~--~~~--------~~----~~E~~~l~~l~h~~iv~~~~~~~~~~~ 131 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIG--QKG--------TT----LIEAMLLQNVNHPSVIRMKDTLVSGAI 131 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeC--Ccc--------cc----HHHHHHHHhCCCCCCcChhheEEeCCe
Confidence 469999999999999999999854 45666652 110 11 469999999999999999999886543
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||+. ++|.+++.. ....+++..+..|+.||+.||.|||++||+||||||+|||++.
T Consensus 132 --------------~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~ 192 (357)
T PHA03209 132 --------------TCMVLPHYS-SDLYTYLTK----RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND 192 (357)
T ss_pred --------------eEEEEEccC-CcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence 499999996 788888864 2356899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 193 ~-------~~~kl~DfG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 193 V-------DQVCIGDLGAAQFPVVAP-----------AFLGLAGTVETNAPEVLAR----DKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred C-------CCEEEecCccccccccCc-----------ccccccccccccCCeecCC----CCCCchhhHHHHHHHHHHHH
Confidence 7 789999999986432111 1113458999999999875 56889999999999999999
Q ss_pred hCCCCC-CCCCH----------HHHHHHHHhCC-CC-Cch-----hHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001142 1045 TLQVPY-MGLSE----------LEIHDLIQMGK-RP-RLT-----DELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1106 (1142)
Q Consensus 1045 tG~~Pf-~~~~~----------~el~~~I~~~~-~p-~l~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1106 (1142)
++..|+ ..... ..+...+.... .+ .++ ......... ..........+ ........+..+.
T Consensus 251 ~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~ 328 (357)
T PHA03209 251 AYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEY-ASLERQPYTRY-PCFQRVNLPIDGE 328 (357)
T ss_pred HcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhh-cccCCCccccc-HHHhccCCCchHH
Confidence 865554 32111 11112221111 11 000 000000000 00000000000 0000113455678
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1107 DVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1107 dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
++|.+||+.||.+||||.|+++|+|++.
T Consensus 329 ~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 329 FLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 8999999999999999999999999974
No 200
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=9.3e-34 Score=314.47 Aligned_cols=259 Identities=24% Similarity=0.342 Sum_probs=186.2
Q ss_pred eeecccCceEEEEEEEC-C---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG-S---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~-~---~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
+.||+|+||.||+|... . ..+++|. +... ........ +.+|+.+++.++||||+++++.+.....
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~--~~~~-~~~~~~~~----~~~e~~~~~~l~h~nii~~~~~~~~~~~---- 69 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKE--LRAS-ATPDEQLL----FLQEVQPYRELNHPNVLQCLGQCIESIP---- 69 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEee--cCcc-CChHHHHH----HHHHHHHHHhCCCCCcceEEEEECCCCc----
Confidence 46999999999999752 2 2344443 2221 12222233 3789999999999999999999876543
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
.++||||+++++|.+++...........++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 70 ----------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~--- 136 (269)
T cd05042 70 ----------YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD--- 136 (269)
T ss_pred ----------eEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC---
Confidence 4999999999999999976432222345778889999999999999999999999999999999887
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc---CCCCCCchhhHHHHHHHHHHHHh
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||++......... .......+++.|+|||++.... ....++.++|||||||++|||++
T Consensus 137 ----~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 204 (269)
T cd05042 137 ----LSVKIGDYGLALEQYPEDYY--------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFT 204 (269)
T ss_pred ----CcEEEeccccccccccchhe--------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHh
Confidence 78999999998643221100 0112234677899999975421 12456889999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|..||......+....+.......++. +......+..+.+++..|| .||++|||++
T Consensus 205 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~ 261 (269)
T cd05042 205 AADQPYPDLSDEQVLKQVVREQDIKLPK----------------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAE 261 (269)
T ss_pred CCCCCCCcCCHHHHHHHHhhccCccCCC----------------------CcccccCCHHHHHHHHHHh-cCcccccCHH
Confidence 788998766555444433222221111 0011144566788999998 5999999999
Q ss_pred HHHHHH
Q 001142 1125 DLYEMF 1130 (1142)
Q Consensus 1125 EVL~~L 1130 (1142)
+|++.+
T Consensus 262 ~v~~~l 267 (269)
T cd05042 262 EVHELL 267 (269)
T ss_pred HHHHHh
Confidence 999875
No 201
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.1e-33 Score=310.52 Aligned_cols=248 Identities=26% Similarity=0.391 Sum_probs=190.5
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 890 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~ 890 (1142)
++||+|+||.||+|++ .++.+|+|... .. ....... .+.+|++++++++||||+++++++.....
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~--~~-~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------ 67 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCR--ET-LPPDLKA----KFLQEARILKQYSHPNIVRLIGVCTQKQP------ 67 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecC--cc-CCHHHHH----HHHHHHHHHHhCCCCCcceEEEEEcCCCC------
Confidence 4799999999999987 46667777643 11 1222223 34789999999999999999999876543
Q ss_pred CCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCC
Q 001142 891 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 970 (1142)
Q Consensus 891 ~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~ 970 (1142)
.++||||+++++|.+++.. ....+++..+..++.|++.||.|||++||+||||||+|||++.+
T Consensus 68 --------~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~----- 130 (252)
T cd05084 68 --------IYIVMELVQGGDFLTFLRT----EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEK----- 130 (252)
T ss_pred --------eEEEEeeccCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCC-----
Confidence 4999999999999999865 12458999999999999999999999999999999999999877
Q ss_pred CCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 001142 971 GKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVP 1049 (1142)
Q Consensus 971 ~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~P 1049 (1142)
+.+||+|||.+......... . ......++..|+|||.+.+ ..++.++||||||+++|||++ |..|
T Consensus 131 --~~~kl~dfg~~~~~~~~~~~---~-----~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~e~~~~~~~p 196 (252)
T cd05084 131 --NVLKISDFGMSREEEDGVYA---S-----TGGMKQIPVKWTAPEALNY----GRYSSESDVWSFGILLWEAFSLGAVP 196 (252)
T ss_pred --CcEEECccccCccccccccc---c-----cCCCCCCceeecCchhhcC----CCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 78999999998754321100 0 0011123457999999865 457899999999999999998 8999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEM 1129 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~ 1129 (1142)
|...........+.....+..+ ...+..+.+++.+||+.+|++|||+.++++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 249 (252)
T cd05084 197 YANLSNQQTREAIEQGVRLPCP---------------------------ELCPDAVYRLMERCWEYDPGQRPSFSTVHQE 249 (252)
T ss_pred ccccCHHHHHHHHHcCCCCCCc---------------------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9766655544444332221111 1345578999999999999999999999987
Q ss_pred HH
Q 001142 1130 FV 1131 (1142)
Q Consensus 1130 L~ 1131 (1142)
+.
T Consensus 250 l~ 251 (252)
T cd05084 250 LQ 251 (252)
T ss_pred Hh
Confidence 64
No 202
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1e-33 Score=316.02 Aligned_cols=253 Identities=28% Similarity=0.410 Sum_probs=201.8
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|+..++||+|+||.||+|.+ .+..+|+|+..... .......+ .+|+.+++++.||||+++++++.+..
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~-- 75 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE---AEDEIEDI----QQEITVLSQCDSPYVTKYYGSYLKGT-- 75 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc---cHHHHHHH----HHHHHHHHhCCCCCEeeEEEEEEECC--
Confidence 478889999999999999987 45678888755332 12223333 78999999999999999999988654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++.. .++++..+..++.|++.||+|||+.+++|+||+|+||+++.+
T Consensus 76 ------------~~~lv~e~~~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~ 137 (277)
T cd06640 76 ------------KLWIIMEYLGGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ 137 (277)
T ss_pred ------------EEEEEEecCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCC
Confidence 35999999999999998864 358899999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++........ ......++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 138 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~apE~~~~----~~~~~~~Dv~slG~il~el~t 196 (277)
T cd06640 138 -------GDVKLADFGVAGQLTDTQI----------KRNTFVGTPFWMAPEVIQQ----SAYDSKADIWSLGITAIELAK 196 (277)
T ss_pred -------CCEEEcccccceeccCCcc----------ccccccCcccccCHhHhcc----CCCccHHHHHHHHHHHHHHHH
Confidence 7899999999865432110 1112357889999999865 457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||...........+.....+... ...+..+.+++.+||+.+|++||++.+
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (277)
T cd06640 197 GEPPNSDMHPMRVLFLIPKNNPPTLT---------------------------GEFSKPFKEFIDACLNKDPSFRPTAKE 249 (277)
T ss_pred CCCCCCCcChHhHhhhhhcCCCCCCc---------------------------hhhhHHHHHHHHHHcccCcccCcCHHH
Confidence 99999876655444333222222111 145667899999999999999999999
Q ss_pred HHHHHHhhcC
Q 001142 1126 LYEMFVARTS 1135 (1142)
Q Consensus 1126 VL~~L~~~~s 1135 (1142)
+++|+|+...
T Consensus 250 il~~~~~~~~ 259 (277)
T cd06640 250 LLKHKFIVKN 259 (277)
T ss_pred HHhChHhhhc
Confidence 9999998654
No 203
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.3e-33 Score=311.80 Aligned_cols=252 Identities=26% Similarity=0.394 Sum_probs=197.0
Q ss_pred CCCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.++|++.++||+|+||.||+|.+. +..+++|...... .. .+.+ .+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~--~~---~~~~----~~E~~~l~~l~~~~i~~~~~~~~~~-- 73 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT--MS---PESF----LEEAQIMKKLRHDKLVQLYAVVSEE-- 73 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC--CC---HHHH----HHHHHHHHhcCCCceEEEEeEECCC--
Confidence 457899999999999999999874 4567777654221 11 1233 7899999999999999999887432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. .....+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 74 -------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~ 137 (260)
T cd05070 74 -------------PIYIVTEYMSKGSLLDFLKD---GEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD 137 (260)
T ss_pred -------------CcEEEEEecCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC
Confidence 23899999999999999975 22345899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||.+......... ......++..|+|||++.+ ..++.++||||||+++|+|+
T Consensus 138 ~-------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l~ 197 (260)
T cd05070 138 G-------LVCKIADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELV 197 (260)
T ss_pred C-------ceEEeCCceeeeeccCcccc---------cccCCCCCccccChHHHhc----CCCcchhhhHHHHHHHHHHH
Confidence 7 78999999999765332111 1112235667999998865 46789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |..||.+....+....+.....+..+ ...+..+.+++.+||..||.+|||+
T Consensus 198 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rpt~ 250 (260)
T cd05070 198 TKGRVPYPGMNNREVLEQVERGYRMPCP---------------------------QDCPISLHELMLQCWKKDPEERPTF 250 (260)
T ss_pred hcCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CcCCHHHHHHHHHHcccCcccCcCH
Confidence 9 89999877666655555433222111 1345679999999999999999999
Q ss_pred HHHHHHHH
Q 001142 1124 GDLYEMFV 1131 (1142)
Q Consensus 1124 ~EVL~~L~ 1131 (1142)
+++.+.+.
T Consensus 251 ~~l~~~l~ 258 (260)
T cd05070 251 EYLQSFLE 258 (260)
T ss_pred HHHHHHHh
Confidence 99998764
No 204
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=9.3e-34 Score=321.58 Aligned_cols=263 Identities=24% Similarity=0.369 Sum_probs=201.5
Q ss_pred CCCcceeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 875 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~---------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 875 (1142)
.++|.+.+.||+|+||.||+|.+.+ ..+|+|+.... ........+ .+|+.+++++ +||||+++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~----~~e~~~l~~l~~h~~i~~~ 89 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD---ATEKDLSDL----ISEMEMMKMIGKHKNIINL 89 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC---CChHHHHHH----HHHHHHHHHhcCCCCEeeE
Confidence 3679999999999999999998632 34777765322 122223333 6899999999 79999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 944 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----------~~~~ls~~~i~~Ia~qIa~gL~y 944 (1142)
++++...+. .++||||+++++|.+++...... ....+++..+..++.|++.||+|
T Consensus 90 ~~~~~~~~~--------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~ 155 (307)
T cd05098 90 LGACTQDGP--------------LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEY 155 (307)
T ss_pred EEEEecCCc--------------eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHH
Confidence 999876543 49999999999999999763211 12358899999999999999999
Q ss_pred HHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 945 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 945 LHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
||++|++||||||+||+++.+ +.+||+|||.+.......... ......+++.|+|||++.+
T Consensus 156 lH~~gi~H~dlkp~Nill~~~-------~~~kL~dfg~a~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~---- 216 (307)
T cd05098 156 LASKKCIHRDLAARNVLVTED-------NVMKIADFGLARDIHHIDYYK--------KTTNGRLPVKWMAPEALFD---- 216 (307)
T ss_pred HHHCCcccccccHHheEEcCC-------CcEEECCCcccccccccchhh--------ccccCCCccceeChHHhcc----
Confidence 999999999999999999877 789999999987543211100 0011224568999999875
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001142 1025 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1103 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1142)
..++.++|||||||++|+|++ |..||.+....++...+.....+..+ ...+.
T Consensus 217 ~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~ 269 (307)
T cd05098 217 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------------------------SNCTN 269 (307)
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCC---------------------------CcCCH
Confidence 467899999999999999998 89999877666666555443322111 13456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1104 FLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1104 ~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
.+.+++.+||+.+|.+|||+.++++++.....
T Consensus 270 ~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 270 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 78999999999999999999999999876543
No 205
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.5e-34 Score=337.21 Aligned_cols=278 Identities=20% Similarity=0.257 Sum_probs=196.7
Q ss_pred CCcceeeeecccCceEEEEEEECC----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.+|++.+.||+|+||.||+|...+ ..+++|... .. ... .+|+.++++++|||||++++++...
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~--~~-------~~~----~~E~~il~~l~h~~iv~~~~~~~~~ 158 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVT--GG-------KTP----GREIDILKTISHRAIINLIHAYRWK 158 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecc--cc-------ccH----HHHHHHHHhcCCCCccceeeeEeeC
Confidence 469999999999999999997632 345555432 11 111 5799999999999999999988764
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ..++||||+. ++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+|||+
T Consensus 159 ~--------------~~~lv~e~~~-~~l~~~l~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill 218 (392)
T PHA03207 159 S--------------TVCMVMPKYK-CDLFTYVDR-----SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL 218 (392)
T ss_pred C--------------EEEEEehhcC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE
Confidence 4 3499999996 789888854 3568999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.++|+|||++......... .......||+.|+|||++.+ ..++.++|||||||++||
T Consensus 219 ~~~-------~~~~l~DfG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslGvil~e 279 (392)
T PHA03207 219 DEP-------ENAVLGDFGAACKLDAHPDT--------PQCYGWSGTLETNSPELLAL----DPYCAKTDIWSAGLVLFE 279 (392)
T ss_pred cCC-------CCEEEccCccccccCccccc--------ccccccccccCccCHhHhcC----CCCCchhhHHHHHHHHHH
Confidence 887 78999999999755432111 11224569999999999875 568899999999999999
Q ss_pred HHhCCCCCCCCCH----HHHHHHHHhCCCCCc--hhHH-hhhcccccccccccCCCCCCch--hhhhhHHHHHHHHHHhc
Q 001142 1043 LLTLQVPYMGLSE----LEIHDLIQMGKRPRL--TDEL-EALGSCHEHEVAQSGSGFEKPE--AELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~----~el~~~I~~~~~p~l--~~~l-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~dLI~~CL 1113 (1142)
|++|+.||.+... ..+...+........ +... .................+..+. .....+.++.++|.+||
T Consensus 280 l~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml 359 (392)
T PHA03207 280 MSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKML 359 (392)
T ss_pred HHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHh
Confidence 9999999976432 122222211111110 0000 0000000000000000010110 01134567889999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhcCC
Q 001142 1114 EENPTERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~~~ss 1136 (1142)
+.||.+|||+.|++.|+|+....
T Consensus 360 ~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 360 TFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred ccChhhCCCHHHHhhCchhhccc
Confidence 99999999999999999998654
No 206
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.3e-34 Score=334.32 Aligned_cols=261 Identities=25% Similarity=0.345 Sum_probs=197.4
Q ss_pred CCCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g 877 (1142)
-++|++.++||+|+||.||+|++.+ ..+|+|+.+.. ......+. +.+|+.+++++. |||||++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~---~~~~~~~~----~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT---ARSSEKQA----LMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC---CChHHHHH----HHHHHHHHHhcCCCCCeeeEEE
Confidence 3468999999999999999998632 24777764322 12222233 379999999996 999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc------------------------------------
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------------------------ 921 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~------------------------------------ 921 (1142)
++.+... .++||||+++|+|.+++......
T Consensus 109 ~~~~~~~--------------~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (400)
T cd05105 109 ACTKSGP--------------IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENK 174 (400)
T ss_pred EEccCCc--------------eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccc
Confidence 9976543 49999999999999998753210
Q ss_pred -------------------------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHH
Q 001142 922 -------------------------------------------------------GEKHVSVKLALFIAQDVAAALVELH 946 (1142)
Q Consensus 922 -------------------------------------------------------~~~~ls~~~i~~Ia~qIa~gL~yLH 946 (1142)
....+++..+..++.||+.||+|||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH 254 (400)
T cd05105 175 GDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA 254 (400)
T ss_pred ccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1134788889999999999999999
Q ss_pred hCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001142 947 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1026 (1142)
Q Consensus 947 s~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1026 (1142)
+++|+||||||+|||++.+ +.+||+|||+++........ .......+++.|+|||.+.+ ..
T Consensus 255 ~~~ivH~dikp~Nill~~~-------~~~kL~DfGla~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~ 315 (400)
T cd05105 255 SKNCVHRDLAARNVLLAQG-------KIVKICDFGLARDIMHDSNY--------VSKGSTFLPVKWMAPESIFD----NL 315 (400)
T ss_pred hCCeeCCCCChHhEEEeCC-------CEEEEEeCCcceeccccccc--------cccCCcCCCcceEChhhhcC----CC
Confidence 9999999999999999887 78999999999754321110 11123356788999999875 56
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHH
Q 001142 1027 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1104 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1142)
++.++|||||||++|||++ |..||....... ....+..+..+..+ ...+..
T Consensus 316 ~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~ 368 (400)
T cd05105 316 YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKP---------------------------DHATQE 368 (400)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCC---------------------------ccCCHH
Confidence 7899999999999999997 999997643332 22333322211110 144567
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1105 LVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1105 L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
+.+++.+||+.||++|||+.+|.+.+...
T Consensus 369 l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 369 VYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred HHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 99999999999999999999999987653
No 207
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=9e-34 Score=311.89 Aligned_cols=247 Identities=26% Similarity=0.403 Sum_probs=198.7
Q ss_pred CCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+.+|++.+.||+|+||.||++...+..+++|+.... ...+.+ .+|+.++++++||||+++++++....
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~------~~~~~~----~~e~~~l~~~~~~~i~~~~~~~~~~~-- 72 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCD------VTAQAF----LEETAVMTKLHHKNLVRLLGVILHNG-- 72 (254)
T ss_pred HHHceeeeeeccCCCCceEecccCCCceEEEeecCc------chHHHH----HHHHHHHHhCCCCCcCeEEEEEcCCC--
Confidence 467999999999999999999998888999986432 112233 78999999999999999999876422
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.++||||+++++|.+++.. .....+++..+..++.|++.||.|||++|++||||||+||+++.+
T Consensus 73 -------------~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~ 136 (254)
T cd05083 73 -------------LYIVMELMSKGNLVNFLRT---RGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSED 136 (254)
T ss_pred -------------cEEEEECCCCCCHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCC
Confidence 3899999999999999976 223458999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||.+....... .....+..|+|||++.+ ..++.++||||||+++|+|++
T Consensus 137 -------~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~y~~pe~~~~----~~~~~~~Dv~slG~~l~el~~ 192 (254)
T cd05083 137 -------GVAKVSDFGLARVGSMGV-------------DNSKLPVKWTAPEALKH----KKFSSKSDVWSYGVLLWEVFS 192 (254)
T ss_pred -------CcEEECCCccceeccccC-------------CCCCCCceecCHHHhcc----CCcCchhhHHHHHHHHHHHHh
Confidence 789999999986532210 11224567999999865 567899999999999999998
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|+.||......+....+..+..+... ...+..+.+++.+||+.+|.+||+++
T Consensus 193 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 245 (254)
T cd05083 193 YGRAPYPKMSLKEVKECVEKGYRMEPP---------------------------EGCPADVYVLMTSCWETEPKKRPSFH 245 (254)
T ss_pred CCCCCCccCCHHHHHHHHhCCCCCCCC---------------------------CcCCHHHHHHHHHHcCCChhhCcCHH
Confidence 99999877766655555443222111 13456789999999999999999999
Q ss_pred HHHHHHH
Q 001142 1125 DLYEMFV 1131 (1142)
Q Consensus 1125 EVL~~L~ 1131 (1142)
++++.+.
T Consensus 246 ~l~~~l~ 252 (254)
T cd05083 246 KLREKLE 252 (254)
T ss_pred HHHHHHc
Confidence 9998764
No 208
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=8.8e-34 Score=313.71 Aligned_cols=260 Identities=26% Similarity=0.424 Sum_probs=199.3
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+++|++.+.||+|++|.||+|.+ .+..+++|....... ........ +.+|+.+++.++||||+++++++.+.+
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~-~~~~~~~~----~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL-MDAKARAD----CIKEIDLLKQLNHPNVIKYYASFIEDN 75 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh-hhHHHHHH----HHHHHHHHHHccCCchhhhhheeEeCC
Confidence 46789999999999999999996 566777776432211 11122233 478999999999999999999988655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++||||+++++|.+++..... ....+++..+..++.||+.||.|||++||+|+||||+||+++
T Consensus 76 ~--------------~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~ 140 (267)
T cd08229 76 E--------------LNIVLELADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT 140 (267)
T ss_pred e--------------EEEEEEecCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc
Confidence 3 4999999999999999875322 235689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||++........ ......|+..|+|||++.+ ..++.++||||||+++|+|
T Consensus 141 ~~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~~~ape~~~~----~~~~~~~Dv~slG~il~~l 199 (267)
T cd08229 141 AT-------GVVKLGDLGLGRFFSSKTT----------AAHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCLLYEM 199 (267)
T ss_pred CC-------CCEEECcchhhhccccCCc----------ccccccCCcCccCHHHhcC----CCccchhhHHHHHHHHHHH
Confidence 77 7899999999865432111 1123358889999999865 4578899999999999999
Q ss_pred HhCCCCCCCCCHH--HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1044 LTLQVPYMGLSEL--EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~--el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
++|..||.+.... .....+.....+..+ ....+..+.+++.+||+.||.+||
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~~l~~~p~~Rp 253 (267)
T cd08229 200 AALQSPFYGDKMNLYSLCKKIEQCDYPPLP--------------------------SDHYSEELRQLVNMCINPDPEKRP 253 (267)
T ss_pred HhCCCCcccccchHHHHhhhhhcCCCCCCC--------------------------cccccHHHHHHHHHhcCCCcccCC
Confidence 9999999754322 222332222211111 013556799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001142 1122 TAGDLYEMFVA 1132 (1142)
Q Consensus 1122 Sa~EVL~~L~~ 1132 (1142)
|+.+|++.+..
T Consensus 254 t~~~i~~~~~~ 264 (267)
T cd08229 254 DITYVYDVAKR 264 (267)
T ss_pred CHHHHHHHHhh
Confidence 99999887654
No 209
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.1e-33 Score=313.54 Aligned_cols=259 Identities=28% Similarity=0.425 Sum_probs=196.1
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+|+..+.||+|+||.||+|.. .+..+++|+......... .... ..+.+|+.++++++||||+++++++.+..
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 77 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEV----SALECEIQLLKNLQHERIVQYYGCLRDRA- 77 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHH----HHHHHHHHHHHHcCCCCeeeEEEEEEcCC-
Confidence 688999999999999999987 456778776543321111 1122 23478999999999999999999886532
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
....+++|||+++++|.+++.. ...+++..+..++.|++.||.|||+++|+||||||+||+++.
T Consensus 78 -----------~~~~~l~~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~ 141 (266)
T cd06651 78 -----------EKTLTIFMEYMPGGSVKDQLKA-----YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS 141 (266)
T ss_pred -----------CCEEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC
Confidence 1245899999999999999975 235889999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||++.......... .......++..|+|||++.+ ..++.++|||||||++|+|+
T Consensus 142 ~-------~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~i~~el~ 203 (266)
T cd06651 142 A-------GNVKLGDFGASKRLQTICMSG-------TGIRSVTGTPYWMSPEVISG----EGYGRKADVWSLGCTVVEML 203 (266)
T ss_pred C-------CCEEEccCCCccccccccccC-------CccccCCccccccCHHHhCC----CCCCchhhhHHHHHHHHHHH
Confidence 7 789999999987553211110 01123457889999999875 45788999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHH-hCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 TLQVPYMGLSELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~-~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+|+.||......+....+. ....+.++ ...++.+.+++ +||..+|++||++
T Consensus 204 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li-~~~~~~p~~Rp~~ 255 (266)
T cd06651 204 TEKPPWAEYEAMAAIFKIATQPTNPQLP---------------------------SHISEHARDFL-GCIFVEARHRPSA 255 (266)
T ss_pred HCCCCccccchHHHHHHHhcCCCCCCCc---------------------------hhcCHHHHHHH-HHhcCChhhCcCH
Confidence 9999998654433322221 11111111 13345577788 6888899999999
Q ss_pred HHHHHHHHhh
Q 001142 1124 GDLYEMFVAR 1133 (1142)
Q Consensus 1124 ~EVL~~L~~~ 1133 (1142)
+||++|+|+.
T Consensus 256 ~eil~hp~~~ 265 (266)
T cd06651 256 EELLRHPFAQ 265 (266)
T ss_pred HHHhcCcccc
Confidence 9999999975
No 210
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=1.5e-33 Score=312.32 Aligned_cols=251 Identities=26% Similarity=0.374 Sum_probs=195.6
Q ss_pred CCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.+|++.++||+|+||.||+|++.+ ..+++|+.. ..... .+.+ .+|++++++++||||+++++++.+.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~--~~~~~---~~~~----~~E~~~l~~l~~~~i~~~~~~~~~~--- 73 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMS---PEAF----LQEAQVMKKLRHEKLVQLYAVVSEE--- 73 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecc--cCccC---HHHH----HHHHHHHHhCCCCCcceEEEEECCC---
Confidence 569999999999999999998844 356666643 21111 1233 7899999999999999999886432
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++... ....+++..+..++.|++.||+|||+.+|+||||||+||+++.+
T Consensus 74 ------------~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~ 138 (262)
T cd05071 74 ------------PIYIVTEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGEN 138 (262)
T ss_pred ------------CcEEEEEcCCCCcHHHHHhhc---cccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCC
Confidence 238999999999999999752 22457899999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+......... ......++..|+|||+... ..++.++||||||+++|+|++
T Consensus 139 -------~~~~L~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~----~~~~~~~DvwslG~~l~ellt 198 (262)
T cd05071 139 -------LVCKVADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELTT 198 (262)
T ss_pred -------CcEEeccCCceeeccccccc---------cccCCcccceecCHhHhcc----CCCCchhhHHHHHHHHHHHHc
Confidence 78999999999755432111 1112346778999998765 467899999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|..||.+....+....+......... ...+..+.+++.+||+.||++||++.
T Consensus 199 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~p~~Rp~~~ 251 (262)
T cd05071 199 KGRVPYPGMVNREVLDQVERGYRMPCP---------------------------PECPESLHDLMCQCWRKEPEERPTFE 251 (262)
T ss_pred CCCCCCCCCChHHHHHHHhcCCCCCCc---------------------------cccCHHHHHHHHHHccCCcccCCCHH
Confidence 88899876666555554332211110 14456789999999999999999999
Q ss_pred HHHHHHH
Q 001142 1125 DLYEMFV 1131 (1142)
Q Consensus 1125 EVL~~L~ 1131 (1142)
++++.+.
T Consensus 252 ~~~~~l~ 258 (262)
T cd05071 252 YLQAFLE 258 (262)
T ss_pred HHHHHHH
Confidence 9998765
No 211
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=7.3e-34 Score=339.94 Aligned_cols=276 Identities=18% Similarity=0.270 Sum_probs=195.0
Q ss_pred CCcceeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..|.+.+.||+|+||.||+|.+.. ..||+|.... .. +.+|++++++++|||||++++++...+
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~----------~~----~~~E~~iL~~L~HpnIv~l~~~~~~~~- 233 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY----------AS----SVHEARLLRRLSHPAVLALLDVRVVGG- 233 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc----------cC----HHHHHHHHHHCCCCCCCcEEEEEEECC-
Confidence 469999999999999999999854 4566663210 11 258999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++|||++. ++|.+++.. ....+++..++.|+.||+.||.|||++||+||||||+|||++.
T Consensus 234 -------------~~~lv~e~~~-~~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~ 295 (461)
T PHA03211 234 -------------LTCLVLPKYR-SDLYTYLGA----RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNG 295 (461)
T ss_pred -------------EEEEEEEccC-CCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECC
Confidence 3499999995 789888864 1236899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 296 ~-------~~vkL~DFGla~~~~~~~~~--------~~~~~~~GT~~Y~APE~~~~----~~~~~~sDvwSlGviL~El~ 356 (461)
T PHA03211 296 P-------EDICLGDFGAACFARGSWST--------PFHYGIAGTVDTNAPEVLAG----DPYTPSVDIWSAGLVIFEAA 356 (461)
T ss_pred C-------CCEEEcccCCceeccccccc--------ccccccCCCcCCcCHHHHcC----CCCCchHHHHHHHHHHHHHH
Confidence 7 78999999999764321111 11123469999999999876 56889999999999999999
Q ss_pred hCCCCCCCC--------CHHHHHHHHHhCCCC--CchhHH-h-hhcccccccccccCCCCCCchh--hhhhHHHHHHHHH
Q 001142 1045 TLQVPYMGL--------SELEIHDLIQMGKRP--RLTDEL-E-ALGSCHEHEVAQSGSGFEKPEA--ELETLSFLVDVFR 1110 (1142)
Q Consensus 1045 tG~~Pf~~~--------~~~el~~~I~~~~~p--~l~~~l-~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~dLI~ 1110 (1142)
+|..|+... ...++...+...... .++... . ...................+.+ .......+.+||.
T Consensus 357 ~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~ 436 (461)
T PHA03211 357 VHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVC 436 (461)
T ss_pred HcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHH
Confidence 987655321 123344444332211 110000 0 0000000000000000001100 0133456899999
Q ss_pred HhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1111 RCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1111 ~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
+||+.||.+|||+.|+|+|+||+.
T Consensus 437 ~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 437 RALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHcccChhhCcCHHHHhhCcccCC
Confidence 999999999999999999999974
No 212
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.6e-33 Score=310.56 Aligned_cols=249 Identities=24% Similarity=0.367 Sum_probs=192.3
Q ss_pred eeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~-----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
++||+|+||.||+|.+.. ..+++|+.. ..... ...+. +.+|+.+++++.||||+++++++...
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~--~~~~~-~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~----- 68 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLK--QEHIA-AGKKE----FLREASVMAQLDHPCIVRLIGVCKGE----- 68 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecc--cccch-HHHHH----HHHHHHHHHhcCCCCeeeEEEEEcCC-----
Confidence 479999999999998733 346666543 22111 22233 37899999999999999999986532
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||+|||.++++||||||+|||++.+
T Consensus 69 ----------~~~~v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~-- 131 (257)
T cd05060 69 ----------PLMLVMELAPLGPLLKYLKK-----RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNR-- 131 (257)
T ss_pred ----------ceEEEEEeCCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCC--
Confidence 24899999999999999976 2368999999999999999999999999999999999999887
Q ss_pred cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-C
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-L 1046 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G 1046 (1142)
+.+||+|||.++......... .......++..|+|||.+.+ ..++.++||||||+++|+|++ |
T Consensus 132 -----~~~kl~df~~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~~~~~g 195 (257)
T cd05060 132 -----HQAKISDFGMSRALGAGSDYY-------RATTAGRWPLKWYAPECINY----GKFSSKSDVWSYGVTLWEAFSYG 195 (257)
T ss_pred -----CcEEeccccccceeecCCccc-------ccccCccccccccCHHHhcC----CCCCccchHHHHHHHHHHHHcCC
Confidence 789999999997654322110 01111224567999999865 568899999999999999998 9
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
..||...+..+....+........+ ...+..+.+++.+||..+|.+||++.++
T Consensus 196 ~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~~p~~Rp~~~~l 248 (257)
T cd05060 196 AKPYGEMKGAEVIAMLESGERLPRP---------------------------EECPQEIYSIMLSCWKYRPEDRPTFSEL 248 (257)
T ss_pred CCCcccCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 9999877766666655443321111 1345678999999999999999999999
Q ss_pred HHHHHhh
Q 001142 1127 YEMFVAR 1133 (1142)
Q Consensus 1127 L~~L~~~ 1133 (1142)
++.+...
T Consensus 249 ~~~l~~~ 255 (257)
T cd05060 249 ESTFRRD 255 (257)
T ss_pred HHHHHhc
Confidence 9987653
No 213
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=336.19 Aligned_cols=257 Identities=28% Similarity=0.473 Sum_probs=206.2
Q ss_pred CcceeeeecccCceEEEEEEECC-----cc-EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGS-----AD-AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~-----~~-vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
+-.+.++||+|+||.||+|++.. .. ||+|..+.+ .........+| .+|+++|++++|||||++||+...
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~-~~~~~~~~~e~----m~EArvMr~l~H~NVVr~yGVa~~ 232 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGS-SELTKEQIKEF----MKEARVMRQLNHPNVVRFYGVAVL 232 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeeccc-ccccHHHHHHH----HHHHHHHHhCCCCCEEEEEEEEcC
Confidence 34677999999999999998731 12 566665432 12344556666 899999999999999999999887
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
...+ ++|||+|+||+|.+++++. + ..++..+...++.+.|.||+|||++++|||||-+.|+|
T Consensus 233 ~~Pl--------------~ivmEl~~gGsL~~~L~k~---~-~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL 294 (474)
T KOG0194|consen 233 EEPL--------------MLVMELCNGGSLDDYLKKN---K-KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCL 294 (474)
T ss_pred CCcc--------------EEEEEecCCCcHHHHHHhC---C-CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhe
Confidence 6654 9999999999999999872 2 25999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ ..+||+|||+++.-..... .....--...|+|||.+.. ..|++++|||||||++|
T Consensus 295 ~~~~-------~~vKISDFGLs~~~~~~~~----------~~~~~klPirWLAPEtl~~----~~~s~kTDV~sfGV~~~ 353 (474)
T KOG0194|consen 295 YSKK-------GVVKISDFGLSRAGSQYVM----------KKFLKKLPIRWLAPETLNT----GIFSFKTDVWSFGVLLW 353 (474)
T ss_pred ecCC-------CeEEeCccccccCCcceee----------ccccccCcceecChhhhcc----CccccccchhheeeeEE
Confidence 9987 6789999999865431110 0111224567999999986 58999999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1042 ELLT-LQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1042 ELLt-G~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+.+ |..||.+....++...| ..+.+...+. ..+..+..++.+||..||++
T Consensus 354 Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~---------------------------~~p~~~~~~~~~c~~~~p~~ 406 (474)
T KOG0194|consen 354 EIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPS---------------------------KTPKELAKVMKQCWKKDPED 406 (474)
T ss_pred eeeccCCCCCCCCCHHHHHHHHHhcCccCCCCC---------------------------CCHHHHHHHHHHhccCChhh
Confidence 9999 88999999998888888 4444433221 44567888999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001142 1120 RPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~s 1135 (1142)
||+|.++.+.+.....
T Consensus 407 R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 407 RPTMSTIKKKLEALEK 422 (474)
T ss_pred ccCHHHHHHHHHHHHh
Confidence 9999999887766543
No 214
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.3e-33 Score=321.24 Aligned_cols=270 Identities=25% Similarity=0.306 Sum_probs=205.4
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|++|.||+|... +..+++|....... ...... ..+..|+++++.++||||+++++.+.+..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~----~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 74 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEM-IKRNKV----KRVLTEQEILATLDHPFLPTLYASFQTET- 74 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEecccc-chHHHH----HHHHHHHHHHHhCCCCCchhheeeeecCC-
Confidence 36899999999999999999984 56778887543211 111122 23478999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+.+++|.+++.. .....+++..+..++.||+.||+|||+.||+|+||||+||+++.
T Consensus 75 -------------~~~lv~e~~~~~~L~~~~~~---~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~ 138 (316)
T cd05574 75 -------------YLCLVMDYCPGGELFRLLQR---QPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE 138 (316)
T ss_pred -------------EEEEEEEecCCCCHHHHHHh---CCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC
Confidence 35999999999999999875 22356899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccc-------------------cCCCCCCCCccCCCcccchhhhccccCCC
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-------------------HRGIPAPDVCVGTPRWMAPEVLRAMHKPN 1025 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-------------------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 1025 (1142)
+ +.++|+|||++............. ...........||..|+|||++.+ .
T Consensus 139 ~-------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~ 207 (316)
T cd05574 139 S-------GHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG----D 207 (316)
T ss_pred C-------CCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC----C
Confidence 7 789999999987543221110000 000011224468999999999875 4
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHH
Q 001142 1026 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1105 (1142)
Q Consensus 1026 ~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1105 (1142)
.++.++||||||+++|+|++|+.||.+.+.......+..... ..+ . ....+..+
T Consensus 208 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~----------------------~---~~~~~~~~ 261 (316)
T cd05574 208 GHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEV-TFP----------------------G---SPPVSSSA 261 (316)
T ss_pred CCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCc-cCC----------------------C---ccccCHHH
Confidence 578999999999999999999999987665544433322111 000 0 00246679
Q ss_pred HHHHHHhcccCCCCCCC----HHHHHHHHHhhcC
Q 001142 1106 VDVFRRCTEENPTERPT----AGDLYEMFVARTS 1135 (1142)
Q Consensus 1106 ~dLI~~CL~~DP~~RPS----a~EVL~~L~~~~s 1135 (1142)
.+++.+||+.||++||| ++|+++|+|+...
T Consensus 262 ~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 262 RDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 99999999999999999 9999999999765
No 215
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.7e-33 Score=312.68 Aligned_cols=259 Identities=24% Similarity=0.338 Sum_probs=186.6
Q ss_pred eeecccCceEEEEEEECC----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGS----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
+.||+|+||.||+|.+.+ ..+++|. ++.... ......+ .+|+.++++++||||+++++++.+...
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~--~~~~~~-~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 69 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKE--LRVSAS-VQEQMKF----LEEAQPYRSLQHSNLLQCLGQCTEVTP---- 69 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEe--cCCCCC-hHHHHHH----HHHHHHHHhCCCCCEeeEEEEEcCCCC----
Confidence 469999999999998642 2355554 332221 2222233 789999999999999999999876543
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
.++||||+++++|.+++...........++..+..++.|++.||+|||+++++|+||||+||+++.+
T Consensus 70 ----------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~--- 136 (269)
T cd05087 70 ----------YLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTAD--- 136 (269)
T ss_pred ----------cEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC---
Confidence 3999999999999999976433333456778889999999999999999999999999999999876
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccC---CCCCCchhhHHHHHHHHHHHHh
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK---PNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+++||+|||.+......... .......++..|+|||++.+... ...++.++||||||+++|||++
T Consensus 137 ----~~~kL~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 204 (269)
T cd05087 137 ----LTVKIGDYGLSHNKYKEDYY--------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFE 204 (269)
T ss_pred ----CcEEECCccccccccCccee--------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHh
Confidence 78999999998643221100 01123357788999999864211 1235789999999999999996
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|..||......+.............. .+......++.+.+++.+|+ .+|++|||++
T Consensus 205 ~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~ 261 (269)
T cd05087 205 LGSQPYRHLSDEQVLTYTVREQQLKLP----------------------KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAE 261 (269)
T ss_pred CCCCCCCCCChHHHHHHHhhcccCCCC----------------------CCccCCCCChHHHHHHHHHh-cCcccCCCHH
Confidence 99999876555443322211111111 00011134456889999999 6899999999
Q ss_pred HHHHHH
Q 001142 1125 DLYEMF 1130 (1142)
Q Consensus 1125 EVL~~L 1130 (1142)
||++.|
T Consensus 262 ~l~~~l 267 (269)
T cd05087 262 EVHLLL 267 (269)
T ss_pred HHHHHh
Confidence 999865
No 216
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=5.7e-34 Score=321.56 Aligned_cols=259 Identities=26% Similarity=0.418 Sum_probs=201.7
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|.....||+|+||.||++.. .+..+++|..... .....+. +.+|+.++++++||||+++++.+...+
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~----~~~~~~~----~~~e~~~l~~l~h~~ii~~~~~~~~~~-- 92 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR----KQQRREL----LFNEVVIMRDYHHENVVDMYNSYLVGD-- 92 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc----hHHHHHH----HHHHHHHHHhCCCCcHHHHHHheecCC--
Confidence 356678899999999999987 4566777764322 1222233 378999999999999999999987644
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 93 ------------~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~ 154 (292)
T cd06658 93 ------------ELWVVMEFLEGGALTDIVTH------TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD 154 (292)
T ss_pred ------------eEEEEEeCCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC
Confidence 34999999999999998854 358899999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++........ ......|+..|+|||.+.+ ..++.++||||||+++|||++
T Consensus 155 -------~~~kL~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slGvil~el~~ 213 (292)
T cd06658 155 -------GRIKLSDFGFCAQVSKEVP----------KRKSLVGTPYWMAPEVISR----LPYGTEVDIWSLGIMVIEMID 213 (292)
T ss_pred -------CCEEEccCcchhhcccccc----------cCceeecCccccCHHHHcc----CCCCchhhHHHHHHHHHHHHh
Confidence 7899999999865432111 1123458899999999865 467899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||......+....+.....+.... ....+..+.+++.+||..||.+|||+.+
T Consensus 214 g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 268 (292)
T cd06658 214 GEPPYFNEPPLQAMRRIRDNLPPRVKD-------------------------SHKVSSVLRGFLDLMLVREPSQRATAQE 268 (292)
T ss_pred CCCCCCCCCHHHHHHHHHhcCCCcccc-------------------------ccccCHHHHHHHHHHccCChhHCcCHHH
Confidence 999998766555444433222111110 0134456889999999999999999999
Q ss_pred HHHHHHhhcCCCCCC
Q 001142 1126 LYEMFVARTSSSISS 1140 (1142)
Q Consensus 1126 VL~~L~~~~ss~~s~ 1140 (1142)
+++|+|+......++
T Consensus 269 il~~~~~~~~~~~~~ 283 (292)
T cd06658 269 LLQHPFLKLAGPPSC 283 (292)
T ss_pred HhhChhhhccCCccc
Confidence 999999997655443
No 217
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.9e-33 Score=314.47 Aligned_cols=263 Identities=22% Similarity=0.357 Sum_probs=199.3
Q ss_pred CCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
.++|++.++||+|+||.||+|.+. +..+|+|.. +.. ........+ .+|+.++++++||||++++++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~--~~~-~~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~ 77 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NES-ASLRERIEF----LNEASVMKGFTCHHVVRLLGV 77 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEEC--CCc-CCHHHHHHH----HHHHHHHHhCCCCCeeeEEEE
Confidence 457999999999999999999753 224666653 221 112222233 689999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----GEKHVSVKLALFIAQDVAAALVELHSKHIMHR 953 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHr 953 (1142)
+.+... .++||||+++|+|.++++..... +...+++..+..++.||+.||.|||+++|+||
T Consensus 78 ~~~~~~--------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~ 143 (288)
T cd05061 78 VSKGQP--------------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 143 (288)
T ss_pred EcCCCC--------------cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 876543 39999999999999999763211 12345778899999999999999999999999
Q ss_pred CCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001142 954 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1033 (1142)
Q Consensus 954 DLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1033 (1142)
||||+||+++.+ +.++|+|||+++........ .......++..|+|||.+.+ ..++.++||
T Consensus 144 dikp~nili~~~-------~~~~L~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~~pE~~~~----~~~~~~~Dv 204 (288)
T cd05061 144 DLAARNCMVAHD-------FTVKIGDFGMTRDIYETDYY--------RKGGKGLLPVRWMAPESLKD----GVFTTSSDM 204 (288)
T ss_pred CCChheEEEcCC-------CcEEECcCCccccccccccc--------cccCCCcccccccCHHHhcc----CCCChHhHH
Confidence 999999999877 78999999998754321110 01112235678999999875 467899999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1034 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1034 wSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
|||||++|||++ |..||.+....+....+..+..+..+ ...++.+.+++.+|
T Consensus 205 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~ 257 (288)
T cd05061 205 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP---------------------------DNCPERVTDLMRMC 257 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHH
Confidence 999999999998 78999877766665555433322111 03345799999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhcC
Q 001142 1113 TEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1113 L~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
|+.||++|||+.++++.+.....
T Consensus 258 l~~~p~~Rps~~~ll~~l~~~~~ 280 (288)
T cd05061 258 WQFNPKMRPTFLEIVNLLKDDLH 280 (288)
T ss_pred cCCChhHCcCHHHHHHHHHhhcC
Confidence 99999999999999997665433
No 218
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.6e-34 Score=317.91 Aligned_cols=252 Identities=28% Similarity=0.425 Sum_probs=198.0
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|+..+.||+|+||.||+|.+. +..+|+|+..... .....+. +.+|+.++++++||||+++++++....
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 75 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE---AEDEIED----IQQEITVLSQCDSPYITRYYGSYLKGT-- 75 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc---chHHHHH----HHHHHHHHHcCCCCccHhhhcccccCC--
Confidence 4778899999999999999874 5567777654221 1222233 378999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++.. ..+++..+..++.||+.|+.|||++|++|+||+|+||+++.+
T Consensus 76 ------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~ 137 (277)
T cd06642 76 ------------KLWIIMEYLGGGSALDLLKP------GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQ 137 (277)
T ss_pred ------------ceEEEEEccCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC
Confidence 34999999999999998854 358999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++..+..... ......|+..|+|||++.+ ..++.++|||||||++|||++
T Consensus 138 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~t 196 (277)
T cd06642 138 -------GDVKLADFGVAGQLTDTQI----------KRNTFVGTPFWMAPEVIKQ----SAYDFKADIWSLGITAIELAK 196 (277)
T ss_pred -------CCEEEccccccccccCcch----------hhhcccCcccccCHHHhCc----CCCchhhhHHHHHHHHHHHHh
Confidence 7899999999875543211 1112357889999999875 457889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||...........+.....+.+ ....+..+.+++.+||+.+|++||++.+
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (277)
T cd06642 197 GEPPNSDLHPMRVLFLIPKNSPPTL---------------------------EGQYSKPFKEFVEACLNKDPRFRPTAKE 249 (277)
T ss_pred CCCCCcccchhhHHhhhhcCCCCCC---------------------------CcccCHHHHHHHHHHccCCcccCcCHHH
Confidence 9999976544433333222211111 0134566899999999999999999999
Q ss_pred HHHHHHhhc
Q 001142 1126 LYEMFVART 1134 (1142)
Q Consensus 1126 VL~~L~~~~ 1134 (1142)
+++|+|+..
T Consensus 250 il~~~~~~~ 258 (277)
T cd06642 250 LLKHKFITR 258 (277)
T ss_pred HHHhHHHHH
Confidence 999999864
No 219
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=7.6e-34 Score=311.75 Aligned_cols=255 Identities=26% Similarity=0.383 Sum_probs=198.7
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|+||.||+|.+. +..+++|...... ......+. +.+|+.++++++|+||+++++.+....
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~----~~~E~~~l~~~~h~~i~~~~~~~~~~~-- 72 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTK--MPVKEKEA----SKKEVILLAKMKHPNIVTFFASFQENG-- 72 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhh--ccchhhHH----HHHHHHHHHhCCCCChhhhhheeccCC--
Confidence 4889999999999999999984 5667777654331 11122223 378999999999999999999887654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++.. .....+++..+..++.|++.||.|||+++|+|+||||+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~ 137 (257)
T cd08225 73 ------------RLFIVMEYCDGGDLMKRINR---QRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKN 137 (257)
T ss_pred ------------eEEEEEecCCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCC
Confidence 34999999999999999875 223457999999999999999999999999999999999999876
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
. ..++|+|||.+........ ......|++.|+|||++.. ..++.++||||||+++|+|++
T Consensus 138 ~------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~~~ape~~~~----~~~~~~~Dv~slG~il~~l~~ 197 (257)
T cd08225 138 G------MVAKLGDFGIARQLNDSME----------LAYTCVGTPYYLSPEICQN----RPYNNKTDIWSLGCVLYELCT 197 (257)
T ss_pred C------CeEEecccccchhccCCcc----------cccccCCCccccCHHHHcC----CCCCchhhHHHHHHHHHHHHh
Confidence 2 3579999999875533111 1123458899999999865 457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|..||......+....+.....+... ...+..+.+++.+||..+|++|||+.+
T Consensus 198 g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ 250 (257)
T cd08225 198 LKHPFEGNNLHQLVLKICQGYFAPIS---------------------------PNFSRDLRSLISQLFKVSPRDRPSITS 250 (257)
T ss_pred CCCCCCCccHHHHHHHHhcccCCCCC---------------------------CCCCHHHHHHHHHHhccChhhCcCHHH
Confidence 99999876555444333222211100 133456999999999999999999999
Q ss_pred HHHHHHh
Q 001142 1126 LYEMFVA 1132 (1142)
Q Consensus 1126 VL~~L~~ 1132 (1142)
+++|+|+
T Consensus 251 ll~~~~~ 257 (257)
T cd08225 251 ILKRPFL 257 (257)
T ss_pred HhhCCCC
Confidence 9999985
No 220
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.2e-33 Score=317.61 Aligned_cols=266 Identities=22% Similarity=0.317 Sum_probs=198.5
Q ss_pred CCCcceeeeecccCceEEEEEEECC------------------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS------------------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL 867 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~------------------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L 867 (1142)
..+|++.++||+|+||.||+|.+.. ..+++|+..... .....+.+ .+|+++++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~~----~~e~~~l~~l 76 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA---SDNAREDF----LKEVKILSRL 76 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc---CHHHHHHH----HHHHHHHHhc
Confidence 4579999999999999999998643 235666643221 12233334 7899999999
Q ss_pred CCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc------CCCCCCHHHHHHHHHHHHHH
Q 001142 868 RHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------GEKHVSVKLALFIAQDVAAA 941 (1142)
Q Consensus 868 ~HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~------~~~~ls~~~i~~Ia~qIa~g 941 (1142)
+||||+++++++..+.. .++||||+++++|.+++...... ....+++..+..++.|++.|
T Consensus 77 ~~~~i~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 142 (296)
T cd05051 77 SDPNIARLLGVCTVDPP--------------LCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASG 142 (296)
T ss_pred CCCCEeEEEEEEecCCC--------------cEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999876543 39999999999999999764311 12268999999999999999
Q ss_pred HHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccc
Q 001142 942 LVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAM 1021 (1142)
Q Consensus 942 L~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 1021 (1142)
|.|||++||+||||||+||+++.+ +.++|+|||.+......... .......+++.|+|||++.+
T Consensus 143 l~~LH~~~i~H~dlkp~Nili~~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~- 206 (296)
T cd05051 143 MRYLESLNFVHRDLATRNCLVGKN-------YTIKIADFGMSRNLYSSDYY--------RVQGRAPLPIRWMAWESVLL- 206 (296)
T ss_pred HHHHHHcCccccccchhceeecCC-------CceEEccccceeecccCcce--------eecCcCCCCceecCHHHhhc-
Confidence 999999999999999999999887 78999999998754322110 01123346788999999875
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhh
Q 001142 1022 HKPNLYGLEVDIWSYGCLLLELLT--LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAEL 1099 (1142)
Q Consensus 1022 ~~~~~~s~ksDVwSLGviL~ELLt--G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1142)
..++.++|||||||++|||++ +..||...+..+....+......... .. ......
T Consensus 207 ---~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------~~-----~~~~~~ 263 (296)
T cd05051 207 ---GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGR---------------QI-----YLPRPP 263 (296)
T ss_pred ---CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccc---------------cc-----cCCCcc
Confidence 467899999999999999998 77888766655554443221100000 00 000001
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 001142 1100 ETLSFLVDVFRRCTEENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1100 ~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~ 1131 (1142)
..+.++.+++.+||+.||.+|||+.||++.|.
T Consensus 264 ~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 264 NCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 34567999999999999999999999998764
No 221
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=9.6e-34 Score=316.13 Aligned_cols=263 Identities=24% Similarity=0.338 Sum_probs=197.7
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHH-HhhCCCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM-LGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~i-L~~L~HpNIVkl~g~~~~~~ 883 (1142)
++|++.+.||+|+||.||+|.+. +..+|+|..... ...... ..+ ..|+.+ ++.++||||+++++++..++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~--~~~~~~-~~~----~~e~~~~~~~~~~~~iv~~~~~~~~~~ 73 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRAT--VNSQEQ-KRL----LMDLDISMRSVDCPYTVTFYGALFREG 73 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecC--CCcHHH-HHH----HHHHHHHHHHcCCCCeeeeeEEEecCC
Confidence 46899999999999999999984 567777765432 222222 222 456665 55668999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENILI 962 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDLKp~NILl 962 (1142)
. .++||||++ ++|.++++..... ...+++..+..++.||+.||+|||++ +++||||||+||++
T Consensus 74 ~--------------~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~ 137 (283)
T cd06617 74 D--------------VWICMEVMD-TSLDKFYKKVYDK-GLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI 137 (283)
T ss_pred c--------------EEEEhhhhc-ccHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE
Confidence 3 499999997 7999988764332 35789999999999999999999997 99999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||.+....... ......++..|+|||.+.+......++.++|||||||++|+
T Consensus 138 ~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~ 199 (283)
T cd06617 138 NRN-------GQVKLCDFGISGYLVDSV-----------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIE 199 (283)
T ss_pred CCC-------CCEEEeeccccccccccc-----------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHH
Confidence 887 789999999987543211 11123578899999998653333457889999999999999
Q ss_pred HHhCCCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++|+.||.... ..+....+.....+..+. ...+..+.+++.+||..+|.+||
T Consensus 200 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~~p~~Rp 253 (283)
T cd06617 200 LATGRFPYDSWKTPFQQLKQVVEEPSPQLPA--------------------------EKFSPEFQDFVNKCLKKNYKERP 253 (283)
T ss_pred HHhCCCCCCccccCHHHHHHHHhcCCCCCCc--------------------------cccCHHHHHHHHHHccCChhhCc
Confidence 999999996422 122222222221111110 13456799999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001142 1122 TAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ss 1136 (1142)
++.++++|+|+....
T Consensus 254 ~~~~il~~~~~~~~~ 268 (283)
T cd06617 254 NYPELLQHPFFELHL 268 (283)
T ss_pred CHHHHhcCchhhhcc
Confidence 999999999998764
No 222
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=1.8e-33 Score=311.45 Aligned_cols=259 Identities=27% Similarity=0.391 Sum_probs=197.0
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.+|++.+.||+|+||.||+|.+. +..+++|....+..... ....+. +.+|+.++++++||||+++++++.+..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~ 77 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNA----LECEIQLLKNLLHERIVQYYGCLRDPM 77 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHH----HHHHHHHHHhcCCCCeeeEEeEeccCC
Confidence 46899999999999999999874 56678876544322211 122233 378999999999999999999876532
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. ...++||||+++++|.+++.. ...+++..+..++.|++.||+|||+++|+|+||||+||+++
T Consensus 78 ~------------~~~~~v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~ 140 (265)
T cd06652 78 E------------RTLSIFMEHMPGGSIKDQLKS-----YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD 140 (265)
T ss_pred C------------ceEEEEEEecCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec
Confidence 1 245899999999999999875 23578899999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+.......... .......|+..|+|||++.+ ..++.++|||||||++|+|
T Consensus 141 ~~-------~~~~l~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~el 202 (265)
T cd06652 141 SV-------GNVKLGDFGASKRLQTICLSG-------TGMKSVTGTPYWMSPEVISG----EGYGRKADIWSVGCTVVEM 202 (265)
T ss_pred CC-------CCEEECcCccccccccccccc-------cccccCCCCccccChhhhcC----CCCCcchhHHHHHHHHHHH
Confidence 77 789999999987543211100 01122358889999999875 4578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++|+.||...........+.... .+.. +...+..+.+++.+|+. +|++||+
T Consensus 203 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~i~~~l~-~p~~Rp~ 254 (265)
T cd06652 203 LTEKPPWAEFEAMAAIFKIATQPTNPVL---------------------------PPHVSDHCRDFLKRIFV-EAKLRPS 254 (265)
T ss_pred hhCCCCCCccchHHHHHHHhcCCCCCCC---------------------------chhhCHHHHHHHHHHhc-ChhhCCC
Confidence 99999998654443332222111 1111 11345568899999995 9999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
++++++|+|.
T Consensus 255 ~~~il~~~~~ 264 (265)
T cd06652 255 ADELLRHTFV 264 (265)
T ss_pred HHHHhcCccc
Confidence 9999999986
No 223
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.6e-33 Score=319.65 Aligned_cols=288 Identities=21% Similarity=0.224 Sum_probs=208.0
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
++++|++.+.||+|+||.||+|.+ .+..+|+|+.+.+..... ... .+.+|+.++++++|+||+++++++...
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~--~~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~ 78 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDG--IPI----SSLREITLLLNLRHPNIVELKEVVVGK 78 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCC--Ccc----hhhHHHHHHHhCCCCCCcceEEEEecC
Confidence 567899999999999999999998 467788887654432111 111 225799999999999999999998753
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
.. ...++||||+. ++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 79 ~~------------~~~~lv~e~~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~ 141 (309)
T cd07845 79 HL------------DSIFLVMEYCE-QDLASLLDNM----PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL 141 (309)
T ss_pred CC------------CeEEEEEecCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 21 14599999997 6898888752 2468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||.+........ ......+++.|+|||.+.+ ...++.++|||||||++|+
T Consensus 142 ~~~-------~~~kL~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DvwslG~il~e 201 (309)
T cd07845 142 TDK-------GCLKIADFGLARTYGLPAK----------PMTPKVVTLWYRAPELLLG---CTTYTTAIDMWAVGCILAE 201 (309)
T ss_pred CCC-------CCEEECccceeeecCCccC----------CCCcccccccccChhhhcC---CCCcCchHHHHHHHHHHHH
Confidence 877 7899999999976543211 1112245788999999865 2457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccc-cccccCCCCCCc-hhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEH-EVAQSGSGFEKP-EAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|++|+.||.+.+..+....+...........+......... .+.......... ......++.+.++|.+||+.||.+|
T Consensus 202 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R 281 (309)
T cd07845 202 LLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKR 281 (309)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhC
Confidence 99999999887777666655432221111111100000000 000000000000 0001246678999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||+.+++.|+|++..
T Consensus 282 ~t~~~il~h~~f~~~ 296 (309)
T cd07845 282 ATAEEALESSYFKEK 296 (309)
T ss_pred cCHHHHhcChhhccC
Confidence 999999999999854
No 224
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3.3e-33 Score=308.50 Aligned_cols=260 Identities=27% Similarity=0.408 Sum_probs=201.2
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|... +..+++|..+..... .....+. +.+|++++++++|+||+++++++.+.+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~----~~~ei~~l~~~~~~~i~~~~~~~~~~~- 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMM-DAKARQD----CLKEIDLLKQLDHPNVIKYLASFIENN- 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeeccccc-chhhHHH----HHHHHHHHHhCCCCCeeeeeeeeecCC-
Confidence 57999999999999999999984 677888875432211 1122233 378999999999999999999988654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++..... ....+++..+..++.|++.||.|||+.||+||||||+||+++.
T Consensus 76 -------------~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~ 141 (267)
T cd08224 76 -------------ELNIVLELADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA 141 (267)
T ss_pred -------------eEEEEEecCCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC
Confidence 34999999999999999976432 2346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||.+........ ......+++.|+|||.+.+ ..++.++|||||||++|+|+
T Consensus 142 ~-------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~y~apE~~~~----~~~~~~~Di~slG~il~~l~ 200 (267)
T cd08224 142 T-------GVVKLGDLGLGRFFSSKTT----------AAHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred C-------CcEEEeccceeeeccCCCc----------ccceecCCccccCHHHhcc----CCCCchhcHHHHHHHHHHHH
Confidence 7 7899999999875432111 1112357889999999875 56788999999999999999
Q ss_pred hCCCCCCCCC--HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1045 TLQVPYMGLS--ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1045 tG~~Pf~~~~--~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
+|+.||.... ..+..+.+..+..+..+. ...+..+.+++.+||..+|.+|||
T Consensus 201 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~i~~cl~~~p~~Rp~ 254 (267)
T cd08224 201 ALQSPFYGDKMNLYSLCKKIEKCDYPPLPA--------------------------DHYSEELRDLVSRCINPDPEKRPD 254 (267)
T ss_pred HCCCCcccCCccHHHHHhhhhcCCCCCCCh--------------------------hhcCHHHHHHHHHHcCCCcccCCC
Confidence 9999996533 222333333222221110 134556899999999999999999
Q ss_pred HHHHHHHHHhh
Q 001142 1123 AGDLYEMFVAR 1133 (1142)
Q Consensus 1123 a~EVL~~L~~~ 1133 (1142)
+.+|++.+...
T Consensus 255 ~~~il~~~~~~ 265 (267)
T cd08224 255 ISYVLQVAKEM 265 (267)
T ss_pred HHHHHHHHHHh
Confidence 99999987654
No 225
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-33 Score=319.05 Aligned_cols=262 Identities=22% Similarity=0.357 Sum_probs=201.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 875 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~---------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 875 (1142)
.++|.+.+.||+|+||.||+|++. ...+++|+.... ......+.+ .+|+.+++.+ +||||+++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~---~~~~~~~~~----~~E~~~l~~l~~h~~i~~~ 86 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD---ATEKDLSDL----VSEMEMMKMIGKHKNIINL 86 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc---cchHHHHHH----HHHHHHHHhhccCCCchhe
Confidence 456899999999999999999752 124666654311 112223334 7899999999 79999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 944 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----------~~~~ls~~~i~~Ia~qIa~gL~y 944 (1142)
++++..... .++||||+++++|.+++...... ....+++..+..++.||+.||.|
T Consensus 87 ~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 152 (304)
T cd05101 87 LGACTQDGP--------------LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEY 152 (304)
T ss_pred eEEEecCCc--------------eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHH
Confidence 999876543 49999999999999999763211 12357888999999999999999
Q ss_pred HHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 945 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 945 LHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
||++||+||||||+||+++.+ +.+||+|||.++......... ......+++.|+|||++.+
T Consensus 153 LH~~givH~dlkp~Nili~~~-------~~~kl~D~g~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~---- 213 (304)
T cd05101 153 LASQKCIHRDLAARNVLVTEN-------NVMKIADFGLARDVNNIDYYK--------KTTNGRLPVKWMAPEALFD---- 213 (304)
T ss_pred HHHCCeeecccccceEEEcCC-------CcEEECCCccceecccccccc--------cccCCCCCceeeCchhhcc----
Confidence 999999999999999999876 789999999997654321110 0112235678999999865
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001142 1025 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1103 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1142)
..++.++||||||+++|+|++ |..||.+.+..++...+........+ ...+.
T Consensus 214 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~ 266 (304)
T cd05101 214 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP---------------------------ANCTN 266 (304)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCC---------------------------CCCCH
Confidence 567899999999999999998 78899887777766665443322111 13456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1104 FLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1104 ~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
.+.+++.+||+.+|.+|||+.|+++.+....
T Consensus 267 ~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 267 ELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 7899999999999999999999999986543
No 226
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.2e-33 Score=321.30 Aligned_cols=284 Identities=19% Similarity=0.257 Sum_probs=188.4
Q ss_pred eeeecccCceEEEEEEECC----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 812 CDEAGKSVSSSLFRCKFGS----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 812 ~~~LG~GsfG~Vy~a~~~~----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
..+||+|+||.||+|++.. ..+|+|.. +.... ... +.+|+.++++++||||+++++++.....
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~--~~~~~----~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 72 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQI--EGTGI----SMS----ACREIALLRELKHPNVIALQKVFLSHSD--- 72 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEe--cCCCC----cHH----HHHHHHHHHhCCCCCeeeEEEEEeccCC---
Confidence 3689999999999999632 45666653 32111 112 2689999999999999999999864321
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhc----cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE----TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~----~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
...++||||++ ++|.+++..... .....+++..+..++.||+.||.|||++||+||||||+|||+.
T Consensus 73 ---------~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~ 142 (317)
T cd07867 73 ---------RKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 142 (317)
T ss_pred ---------CeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEc
Confidence 24699999996 688888754221 1123588999999999999999999999999999999999995
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+. ...+.+||+|||+++........ ........||+.|+|||++.+ ...++.++|||||||++|||
T Consensus 143 ~~~---~~~~~~kl~DfG~a~~~~~~~~~-------~~~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~el 209 (317)
T cd07867 143 GEG---PERGRVKIADMGFARLFNSPLKP-------LADLDPVVVTFWYRAPELLLG---ARHYTKAIDIWAIGCIFAEL 209 (317)
T ss_pred cCC---CCCCcEEEeeccceeccCCCccc-------ccccCcceecccccCcHHhcC---CCccCcHHHHHhHHHHHHHH
Confidence 331 12268999999999765432111 011223468999999999865 24578999999999999999
Q ss_pred HhCCCCCCCCCHH----------HHHHHHHhCCCCCchhHHhhhcccccccc-cc--cCCCCC-------CchhhhhhHH
Q 001142 1044 LTLQVPYMGLSEL----------EIHDLIQMGKRPRLTDELEALGSCHEHEV-AQ--SGSGFE-------KPEAELETLS 1103 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~----------el~~~I~~~~~p~l~~~l~~~~~~~~~~~-~~--~~~~~~-------~~~~~~~~~~ 1103 (1142)
+||++||...... +....+.....+. ...+........... .. ...... ..........
T Consensus 210 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (317)
T cd07867 210 LTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPA-DKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDS 288 (317)
T ss_pred HhCCCCcccccccccccccccHHHHHHHHHhcCCCC-hhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCCh
Confidence 9999999743211 1111111111111 001110000000000 00 000000 0000112345
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001142 1104 FLVDVFRRCTEENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1104 ~L~dLI~~CL~~DP~~RPSa~EVL~~L~~ 1132 (1142)
.+.+|+.+||+.||.+|||+.|+++|+|+
T Consensus 289 ~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 289 KVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 68899999999999999999999999996
No 227
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.8e-33 Score=320.44 Aligned_cols=262 Identities=23% Similarity=0.367 Sum_probs=201.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 875 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~---------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 875 (1142)
.++|.+.++||+|+||.||+|++. ...+|+|+.. .. ........+ .+|+.+++++ +||||+++
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~--~~-~~~~~~~~~----~~E~~~l~~l~~h~~iv~~ 83 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLK--DN-ATDKDLADL----ISEMELMKLIGKHKNIINL 83 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecC--CC-CChHHHHHH----HHHHHHHHhccCCCCeeeE
Confidence 457899999999999999999752 2346777643 21 122333334 7899999999 59999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----------cCCCCCCHHHHHHHHHHHHHHHHH
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVE 944 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-----------~~~~~ls~~~i~~Ia~qIa~gL~y 944 (1142)
++++..... .++||||+++++|.+++..... .....+++..+..++.||+.||.|
T Consensus 84 ~~~~~~~~~--------------~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~ 149 (314)
T cd05099 84 LGVCTQEGP--------------LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEY 149 (314)
T ss_pred EEEEccCCc--------------eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHH
Confidence 999876543 4999999999999999976321 112458999999999999999999
Q ss_pred HHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 945 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 945 LHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
||++||+||||||+|||++.+ +.+||+|||.++......... ......++..|+|||++.+
T Consensus 150 lH~~gi~H~dlkp~Nill~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~---- 210 (314)
T cd05099 150 LESRRCIHRDLAARNVLVTED-------NVMKIADFGLARGVHDIDYYK--------KTSNGRLPVKWMAPEALFD---- 210 (314)
T ss_pred HHHCCeeeccccceeEEEcCC-------CcEEEcccccccccccccccc--------ccccCCCCccccCHHHHcc----
Confidence 999999999999999999877 789999999997653321100 0111124567999999865
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001142 1025 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1103 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1142)
..++.++|||||||++|+|++ |..||.+....+....+..+..+..+ ...+.
T Consensus 211 ~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~ 263 (314)
T cd05099 211 RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKP---------------------------SNCTH 263 (314)
T ss_pred CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCH
Confidence 567899999999999999999 89999887776666665443321111 13455
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1104 FLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1104 ~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
.+.+++.+||+.||++|||+.++++.+....
T Consensus 264 ~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 264 ELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 6899999999999999999999999887654
No 228
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.3e-33 Score=317.57 Aligned_cols=254 Identities=26% Similarity=0.365 Sum_probs=203.4
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||++.+. +..+|+|+...... ...... ..+.+|++++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI-VKLKQV----EHVLNEKRILQSIRHPFLVNLYGSFQDDS- 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh-hhhhHH----HHHHHHHHHHHhCCCCCccceeeEEEcCC-
Confidence 36899999999999999999984 56788887542211 011112 23478999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+|+||+|.||+++.
T Consensus 75 -------------~~~~v~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~ 136 (290)
T cd05580 75 -------------NLYLVMEYVPGGELFSHLRK-----SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS 136 (290)
T ss_pred -------------eEEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC
Confidence 34999999999999999976 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++...... .....+++.|+|||.+.+ ..++.++||||||+++|+|+
T Consensus 137 ~-------~~~kl~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 192 (290)
T cd05580 137 D-------GYIKITDFGFAKRVKGR-------------TYTLCGTPEYLAPEIILS----KGYGKAVDWWALGILIYEML 192 (290)
T ss_pred C-------CCEEEeeCCCccccCCC-------------CCCCCCCccccChhhhcC----CCCCccccHHHHHHHHHHHH
Confidence 7 78999999998754321 113358899999999865 45678999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC---
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP--- 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP--- 1121 (1142)
+|+.||......+....+..+.. .++. ..+..+.+++.+||..||.+||
T Consensus 193 ~g~~p~~~~~~~~~~~~~~~~~~-~~~~---------------------------~~~~~l~~li~~~l~~~p~~R~~~~ 244 (290)
T cd05580 193 AGYPPFFDDNPIQIYEKILEGKV-RFPS---------------------------FFSPDAKDLIRNLLQVDLTKRLGNL 244 (290)
T ss_pred hCCCCCCCCCHHHHHHHHhcCCc-cCCc---------------------------cCCHHHHHHHHHHccCCHHHccCcc
Confidence 99999987665555554443221 1110 2345689999999999999999
Q ss_pred --CHHHHHHHHHhhcCC
Q 001142 1122 --TAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1122 --Sa~EVL~~L~~~~ss 1136 (1142)
+++|+++|+|+....
T Consensus 245 ~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 245 KNGVNDIKNHPWFAGID 261 (290)
T ss_pred cCCHHHHHcCcccccCC
Confidence 999999999987654
No 229
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.6e-33 Score=310.79 Aligned_cols=257 Identities=22% Similarity=0.359 Sum_probs=197.7
Q ss_pred CCCcceeeeecccCceEEEEEEEC---Cc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG---SA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~---~~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
..+|++.+.||+|+||.||+|.+. +. .+++|. ++... .....+.+ .+|+.++++++||||+++++++.
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~--~~~~~-~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~ 75 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKT--LKAGY-TEKQRRDF----LSEASIMGQFDHPNIIHLEGVVT 75 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEE--CCCCC-CHHHHHHH----HHHHHHHHhCCCCCcceEEEEEe
Confidence 357899999999999999999873 22 355554 43321 22333344 78999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
..+. .++||||+++++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||
T Consensus 76 ~~~~--------------~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~ni 137 (267)
T cd05066 76 KSKP--------------VMIVTEYMENGSLDAFLRKH----DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNI 137 (267)
T ss_pred cCCc--------------cEEEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcE
Confidence 6553 39999999999999999751 24689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.++|+|||.+.......... .......++..|+|||.+.+ ..++.++||||||+++
T Consensus 138 li~~~-------~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~~pe~~~~----~~~~~~~Dv~slG~~l 199 (267)
T cd05066 138 LVNSN-------LVCKVSDFGLSRVLEDDPEAA-------YTTRGGKIPIRWTAPEAIAY----RKFTSASDVWSYGIVM 199 (267)
T ss_pred EECCC-------CeEEeCCCCccccccccccee-------eecCCCccceeecCHhHhcc----CccCchhhhHHHHHHH
Confidence 99877 789999999997654321110 00011223567999999875 4678999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|++++ |..||......+....+..+..+..+ ...++.+.+++.+||+.+|.+
T Consensus 200 ~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~ 252 (267)
T cd05066 200 WEVMSYGERPYWEMSNQDVIKAIEEGYRLPAP---------------------------MDCPAALHQLMLDCWQKDRNE 252 (267)
T ss_pred HHHhcCCCCCcccCCHHHHHHHHhCCCcCCCC---------------------------CCCCHHHHHHHHHHcccCchh
Confidence 99887 99999876666655555443221110 134567899999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001142 1120 RPTAGDLYEMFVA 1132 (1142)
Q Consensus 1120 RPSa~EVL~~L~~ 1132 (1142)
||++.++++.+..
T Consensus 253 Rp~~~~i~~~l~~ 265 (267)
T cd05066 253 RPKFEQIVSILDK 265 (267)
T ss_pred CCCHHHHHHHHHh
Confidence 9999999987653
No 230
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-33 Score=316.51 Aligned_cols=260 Identities=25% Similarity=0.359 Sum_probs=201.0
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|.+. +..+|+|..+.+. .......+ .+|+.++++++||||+++++.+...+
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~----~~e~~~l~~~~~~~i~~~~~~~~~~~- 72 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DESKFNQI----IMELDILHKAVSPYIVDFYGAFFIEG- 72 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CHHHHHHH----HHHHHHHHhcCCCcHHhhhhheecCC-
Confidence 46899999999999999999985 6677777654321 22222333 78999999999999999999887654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeeec
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILID 963 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|..++... .....+++..+..++.||+.||.|||+ .||+||||||+||+++
T Consensus 73 -------------~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~ 137 (286)
T cd06622 73 -------------AVYMCMEYMDAGSLDKLYAGG--VATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN 137 (286)
T ss_pred -------------eEEEEEeecCCCCHHHHHHhc--cccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC
Confidence 349999999999999988752 112368999999999999999999997 5999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc--CCCCCCchhhHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH--KPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~~s~ksDVwSLGviL~ 1041 (1142)
.+ +.++|+|||.+..+.... .....+++.|+|||.+.+.. ....++.++|||||||++|
T Consensus 138 ~~-------~~~~l~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 198 (286)
T cd06622 138 GN-------GQVKLCDFGVSGNLVASL------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSIL 198 (286)
T ss_pred CC-------CCEEEeecCCcccccCCc------------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHH
Confidence 86 789999999986543211 11235788999999986522 1234678999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHH---HhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLI---QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I---~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|++|+.||...........+ ..+..+..+ ...++.+.+++.+||+.+|.
T Consensus 199 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~ 251 (286)
T cd06622 199 EMALGRYPYPPETYANIFAQLSAIVDGDPPTLP---------------------------SGYSDDAQDFVAKCLNKIPN 251 (286)
T ss_pred HHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCC---------------------------cccCHHHHHHHHHHcccCcc
Confidence 999999999765443333322 222211111 13556789999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001142 1119 ERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~s 1135 (1142)
+||++.+++.|+|+...
T Consensus 252 ~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 252 RRPTYAQLLEHPWLVKY 268 (286)
T ss_pred cCCCHHHHhcChhhhhc
Confidence 99999999999998654
No 231
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.5e-33 Score=324.89 Aligned_cols=285 Identities=17% Similarity=0.203 Sum_probs=203.3
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||.||+|.. .+..+|+|+.. ...........+ .+|+.++++++||||+++++++....
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLS--RPFQNVTHAKRA----YRELVLMKLVNHKNIIGLLNVFTPQK 88 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecC--ccccChhHHHHH----HHHHHHHHhcCCCCCcceeeeeccCC
Confidence 46799999999999999999997 45667777643 222222222333 68999999999999999999987543
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. ......|+||||+. ++|.+.+.. .++...+..++.|++.||+|||++||+||||||+||+++
T Consensus 89 ~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~ 152 (353)
T cd07850 89 SL--------EEFQDVYLVMELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 152 (353)
T ss_pred Cc--------cccCcEEEEEeccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC
Confidence 22 12235699999996 688888764 288999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||.+....... ......+++.|+|||++.+ ..++.++|||||||++|+|
T Consensus 153 ~~-------~~~kL~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~~l 210 (353)
T cd07850 153 SD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGEM 210 (353)
T ss_pred CC-------CCEEEccCccceeCCCCC-----------CCCCCcccccccCHHHHhC----CCCCCchhhHhHHHHHHHH
Confidence 87 789999999997543311 1123357889999999876 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccc-----------cccccccCCCCC----CchhhhhhHHHHHHH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH-----------EHEVAQSGSGFE----KPEAELETLSFLVDV 1108 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~-----------~~~~~~~~~~~~----~~~~~~~~~~~L~dL 1108 (1142)
++|+.||...+.......+................... ...+.+...... ........++.+.++
T Consensus 211 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (353)
T cd07850 211 IRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDL 290 (353)
T ss_pred HHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHH
Confidence 99999998766555444442211111111111000000 000000000000 000011346678999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
+.+||+.||++|||+.|+++|+|++.
T Consensus 291 i~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 291 LSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred HHHHcCCChhhCcCHHHHhcChhHhh
Confidence 99999999999999999999999864
No 232
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.8e-33 Score=310.67 Aligned_cols=251 Identities=24% Similarity=0.415 Sum_probs=197.6
Q ss_pred CCcceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
++|++.++||+|+||.||+|.. .+..+|+|..... ... .+.+ .+|+.++++++||||+++++++.. +
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~--~~~---~~~~----~~E~~~l~~l~h~~i~~~~~~~~~-~-- 73 (260)
T cd05067 6 ETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG--SMS---PEAF----LAEANLMKQLQHPRLVRLYAVVTQ-E-- 73 (260)
T ss_pred HHceeeeeeccCccceEEeeecCCCceEEEEEecCC--CCc---HHHH----HHHHHHHHhcCCcCeeeEEEEEcc-C--
Confidence 4689999999999999999987 4567888865422 111 2234 789999999999999999988643 2
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++.. .....+++..+..++.|++.||+|||+.|++||||||+||+++.+
T Consensus 74 ------------~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~ 138 (260)
T cd05067 74 ------------PIYIITEYMENGSLVDFLKT---PEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSET 138 (260)
T ss_pred ------------CcEEEEEcCCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCC
Confidence 24999999999999999865 233568999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+......... ......++..|+|||++.. ..++.++||||||+++|||++
T Consensus 139 -------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~pe~~~~----~~~~~~~Di~slG~~l~el~~ 198 (260)
T cd05067 139 -------LCCKIADFGLARLIEDNEYT---------AREGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTEIVT 198 (260)
T ss_pred -------CCEEEccCcceeecCCCCcc---------cccCCcccccccCHHHhcc----CCcCcccchHHHHHHHHHHHh
Confidence 78999999998765421110 1112345678999999865 457889999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|+.||.+.+..+....+..+..+..+ ...+..+.+++.+||..+|++|||++
T Consensus 199 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 251 (260)
T cd05067 199 YGRIPYPGMTNPEVIQNLERGYRMPRP---------------------------DNCPEELYELMRLCWKEKPEERPTFE 251 (260)
T ss_pred CCCCCCCCCChHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHccCChhhCCCHH
Confidence 99999877766665555433222111 13345699999999999999999999
Q ss_pred HHHHHHH
Q 001142 1125 DLYEMFV 1131 (1142)
Q Consensus 1125 EVL~~L~ 1131 (1142)
+++..+.
T Consensus 252 ~l~~~l~ 258 (260)
T cd05067 252 YLRSVLE 258 (260)
T ss_pred HHHHHhh
Confidence 9998764
No 233
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.6e-33 Score=306.96 Aligned_cols=251 Identities=27% Similarity=0.439 Sum_probs=198.2
Q ss_pred eeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~-----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
+.||+|+||.||+|.+. +..+++|+.... ... ...+.+ .+|+.++..++|+||+++++++.+...
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~--~~~-~~~~~~----~~e~~~l~~~~~~~i~~~~~~~~~~~~--- 70 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKED--ASE-EERKDF----LKEARVMKKLGHPNVVRLLGVCTEEEP--- 70 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccc--cch-hHHHHH----HHHHHHHhhcCCCChheeeeeecCCCc---
Confidence 47999999999999985 556777765422 111 123344 789999999999999999999886443
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhcc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET----GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~----~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.++||||+++++|.+++...... ....+++..+..++.|++.||+|||++||+||||||+||+++
T Consensus 71 -----------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~ 139 (262)
T cd00192 71 -----------LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG 139 (262)
T ss_pred -----------eEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC
Confidence 49999999999999999862110 025689999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+......... .......+++.|+|||.+.. ..++.++||||||+++|+|
T Consensus 140 ~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 200 (262)
T cd00192 140 ED-------LVVKISDFGLSRDVYDDDYY--------RKKTGGKLPIRWMAPESLKD----GIFTSKSDVWSFGVLLWEI 200 (262)
T ss_pred CC-------CcEEEccccccccccccccc--------ccccCCCcCccccCHHHhcc----CCcchhhccHHHHHHHHHH
Confidence 87 78999999999765432210 11123457889999999876 4678999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |..||......+....+..+.....+ ...+..+.+++.+||+.||.+|||
T Consensus 201 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rps 253 (262)
T cd00192 201 FTLGATPYPGLSNEEVLEYLRKGYRLPKP---------------------------EYCPDELYELMLSCWQLDPEDRPT 253 (262)
T ss_pred HhcCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------ccCChHHHHHHHHHccCCcccCcC
Confidence 99 69999887776666665543222111 134567999999999999999999
Q ss_pred HHHHHHHH
Q 001142 1123 AGDLYEMF 1130 (1142)
Q Consensus 1123 a~EVL~~L 1130 (1142)
+.|+++++
T Consensus 254 ~~~l~~~l 261 (262)
T cd00192 254 FSELVERL 261 (262)
T ss_pred HHHHHHhh
Confidence 99999876
No 234
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=9.3e-34 Score=313.39 Aligned_cols=266 Identities=27% Similarity=0.381 Sum_probs=199.9
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|+..+.||+|++|.||+|.. .+..+++|+........ .........+.+|+.++++++||||+++++++.+.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-- 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTS--SEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS-- 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCc--hhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC--
Confidence 478889999999999999986 56778888765332211 111222344589999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
+.++||||+++++|.+++.+ ..++++..+..++.||+.||.|||++|++|+||||+||+++.+
T Consensus 77 ------------~~~~v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~ 139 (268)
T cd06630 77 ------------HFNLFVEWMAGGSVSHLLSK-----YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDST 139 (268)
T ss_pred ------------eEEEEEeccCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 34999999999999999975 2468999999999999999999999999999999999999765
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+ ..++|+|||.+......... .........++..|+|||.+.+ ..++.++||||+|+++++|++
T Consensus 140 ~------~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~~~~~~PE~~~~----~~~~~~~Dv~slG~~l~~l~~ 203 (268)
T cd06630 140 G------QRLRIADFGAAARLAAKGTG------AGEFQGQLLGTIAFMAPEVLRG----EQYGRSCDVWSVGCVIIEMAT 203 (268)
T ss_pred C------CEEEEccccccccccccccc------CCccccccccccceeCHhHhcc----CCCCcccchHHHHHHHHHHHh
Confidence 2 46999999998765432111 0011223458899999999865 457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|..||...........+...... ...+......++.+.+++.+||..+|.+||++.+
T Consensus 204 g~~p~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ 260 (268)
T cd06630 204 AKPPWNAEKHSNHLALIFKIASA-----------------------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRE 260 (268)
T ss_pred CCCCCCCCCCcchHHHHHHHhcc-----------------------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHH
Confidence 99999754322211111110000 0000111145567999999999999999999999
Q ss_pred HHHHHHhh
Q 001142 1126 LYEMFVAR 1133 (1142)
Q Consensus 1126 VL~~L~~~ 1133 (1142)
+++|+|++
T Consensus 261 ll~~~~~~ 268 (268)
T cd06630 261 LLKHPVFR 268 (268)
T ss_pred HhcCcccC
Confidence 99999974
No 235
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=2.7e-33 Score=314.16 Aligned_cols=259 Identities=24% Similarity=0.378 Sum_probs=198.7
Q ss_pred CCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
..+|++.+.||+|+||.||+|.+. ...+|+|+.... ........+ .+|+.+++++.||||++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~---~~~~~~~~~----~~ei~~l~~l~h~~iv~~~~~ 76 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE---ASADMQADF----QREAALMAEFDHPNIVKLLGV 76 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC---cCHHHHHHH----HHHHHHHHhcCCCchheEEEE
Confidence 457899999999999999999863 356677764321 122223334 789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----------------cCCCCCCHHHHHHHHHHHHHH
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------------TGEKHVSVKLALFIAQDVAAA 941 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-----------------~~~~~ls~~~i~~Ia~qIa~g 941 (1142)
+.+... .++||||+++++|.+++..... .....+++..+..++.||+.|
T Consensus 77 ~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~a 142 (288)
T cd05050 77 CAVGKP--------------MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAG 142 (288)
T ss_pred EcCCCc--------------cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHH
Confidence 876543 3999999999999999975311 112357888999999999999
Q ss_pred HHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccc
Q 001142 942 LVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAM 1021 (1142)
Q Consensus 942 L~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 1021 (1142)
|.|||+++++||||||+||+++.+ +.++|+|||.+......... .......+++.|+|||.+.+
T Consensus 143 L~~lH~~~i~H~dl~p~nil~~~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~- 206 (288)
T cd05050 143 MAYLSERKFVHRDLATRNCLVGEN-------MVVKIADFGLSRNIYSADYY--------KASENDAIPIRWMPPESIFY- 206 (288)
T ss_pred HHHHHhCCeecccccHhheEecCC-------CceEECccccceecccCccc--------cccCCCccChhhcCHHHHhc-
Confidence 999999999999999999999877 78999999998654321110 01112234667999999875
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhh
Q 001142 1022 HKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE 1100 (1142)
Q Consensus 1022 ~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1100 (1142)
..++.++|||||||++|||++ |..||.+....+....+..+.....+ ..
T Consensus 207 ---~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~ 256 (288)
T cd05050 207 ---NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCP---------------------------DN 256 (288)
T ss_pred ---CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC---------------------------CC
Confidence 568899999999999999997 88899877766665555443322111 03
Q ss_pred hHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 001142 1101 TLSFLVDVFRRCTEENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1101 ~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~ 1131 (1142)
.+..+.+++.+||+.||.+|||+.|+++.|.
T Consensus 257 ~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 257 CPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 4566999999999999999999999998764
No 236
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.3e-33 Score=308.98 Aligned_cols=248 Identities=21% Similarity=0.330 Sum_probs=190.8
Q ss_pred eecccCceEEEEEEEC--C--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCC
Q 001142 814 EAGKSVSSSLFRCKFG--S--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 814 ~LG~GsfG~Vy~a~~~--~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
.||+|+||.||+|.+. + ..+|+|+.... . .....+. +.+|+.++++++||||+++++++...
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~--~-~~~~~~~----~~~E~~~l~~l~h~~ii~~~~~~~~~------- 67 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE--N-EKSVRDE----MMREAEIMHQLDNPYIVRMIGVCEAE------- 67 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccc--c-ChHHHHH----HHHHHHHHHhcCCCCeEEEEEEEcCC-------
Confidence 4899999999999873 2 34666664322 1 1222233 47999999999999999999987532
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|.+++.. ....+++..+.+++.||+.||.|||++|++||||||+|||++.+
T Consensus 68 --------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~---- 131 (257)
T cd05115 68 --------ALMLVMEMASGGPLNKFLSG----KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQ---- 131 (257)
T ss_pred --------CeEEEEEeCCCCCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCC----
Confidence 24899999999999999864 13468999999999999999999999999999999999999877
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQV 1048 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~ 1048 (1142)
+.+||+|||.+.......... .......++..|+|||++.. ..++.++|||||||++|+|++ |..
T Consensus 132 ---~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~el~~~g~~ 197 (257)
T cd05115 132 ---HYAKISDFGLSKALGADDSYY-------KARSAGKWPLKWYAPECINF----RKFSSRSDVWSYGITMWEAFSYGQK 197 (257)
T ss_pred ---CcEEeccCCccccccCCccce-------eccCCCCCCcccCCHHHHcc----CCCCchhhHHHHHHHHHHHhcCCCC
Confidence 789999999987543321110 00111224578999999865 457889999999999999996 999
Q ss_pred CCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 001142 1049 PYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYE 1128 (1142)
Q Consensus 1049 Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~ 1128 (1142)
||.+....+....+..+..+..+ ...++++.+++.+||..||++||++.+|.+
T Consensus 198 p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 198 PYKKMKGPEVMSFIEQGKRLDCP---------------------------AECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred CcCcCCHHHHHHHHHCCCCCCCC---------------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99887776666665554432211 134567999999999999999999999998
Q ss_pred HHHh
Q 001142 1129 MFVA 1132 (1142)
Q Consensus 1129 ~L~~ 1132 (1142)
.+..
T Consensus 251 ~l~~ 254 (257)
T cd05115 251 RMRT 254 (257)
T ss_pred HHhh
Confidence 7753
No 237
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.3e-33 Score=315.26 Aligned_cols=267 Identities=25% Similarity=0.350 Sum_probs=202.0
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 882 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~ 882 (1142)
.++|++.+.||+|+||.||+|.. .+..+++|+.... ...... +.+|+.++.++ +||||+++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~-----~~~~~~----~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPI-----SDVDEE----IEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEeccc-----ccHHHH----HHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 56799999999999999999997 4566777775321 111122 36899999999 799999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+.. .....++||||+++++|.++++..... ...+++..+..++.|++.||+|||++||+||||||+||++
T Consensus 92 ~~~---------~~~~~~lv~ey~~~~sL~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili 161 (291)
T cd06639 92 DKL---------VGGQLWLVLELCNGGSVTELVKGLLIC-GQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL 161 (291)
T ss_pred ccc---------CCCeeEEEEEECCCCcHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE
Confidence 321 122469999999999999998753222 3468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL~ 1041 (1142)
+.+ +.+||+|||.+........ ......|+..|+|||.+.... ....++.++|||||||++|
T Consensus 162 ~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~ 224 (291)
T cd06639 162 TTE-------GGVKLVDFGVSAQLTSTRL----------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAI 224 (291)
T ss_pred cCC-------CCEEEeecccchhcccccc----------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHH
Confidence 877 6799999999875433111 112335888999999976421 1123678999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|++|+.||...........+.....+.... + ......+.+++.+||+.+|++||
T Consensus 225 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~---~~~~~~l~~li~~~l~~~p~~Rp 279 (291)
T cd06639 225 ELGDGDPPLFDMHPVKTLFKIPRNPPPTLLH----------------------P---EKWCRSFNHFISQCLIKDFEARP 279 (291)
T ss_pred HHhhCCCCCCCCcHHHHHHHHhcCCCCCCCc----------------------c---cccCHHHHHHHHHHhhcChhhCc
Confidence 9999999998765544433333322211110 0 12345689999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001142 1122 TAGDLYEMFVAR 1133 (1142)
Q Consensus 1122 Sa~EVL~~L~~~ 1133 (1142)
++.|+++|+|++
T Consensus 280 s~~~il~~~~~~ 291 (291)
T cd06639 280 SVTHLLEHPFIK 291 (291)
T ss_pred CHHHHhcCcccC
Confidence 999999999974
No 238
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-33 Score=316.17 Aligned_cols=278 Identities=20% Similarity=0.266 Sum_probs=198.4
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||.|++|.||+|++ .+..+++|....+.. ....... +.+|++++++++||||+++++++.+.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 72 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTE--TEGVPST----AIREISLLKELNHPNIVKLLDVIHTEN-- 72 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccc--ccccchH----HHHHHHHHHhcCCCCCcchhhhcccCC--
Confidence 488999999999999999988 456677776543321 1111122 378999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+. ++|.+++.. .....+++..+..++.||+.||+|||++|++||||+|+||+++.+
T Consensus 73 ------------~~~~v~e~~~-~~l~~~~~~---~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~ 136 (284)
T cd07860 73 ------------KLYLVFEFLH-QDLKKFMDA---SPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE 136 (284)
T ss_pred ------------cEEEEeeccc-cCHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 3499999996 689988865 233568999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||.+........ ......+++.|+|||++.+ ...++.++||||||+++|+|+|
T Consensus 137 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~il~~l~t 196 (284)
T cd07860 137 -------GAIKLADFGLARAFGVPVR----------TYTHEVVTLWYRAPEILLG---CKYYSTAVDIWSLGCIFAEMVT 196 (284)
T ss_pred -------CCEEEeeccchhhcccCcc----------ccccccccccccCCeEEec---CCCCCcHHHHHHHHHHHHHHHH
Confidence 7899999999865432111 1112346888999998765 2346789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHH-HhCCCCCchhHHhh---hcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1046 LQVPYMGLSELEIHDLI-QMGKRPRLTDELEA---LGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|+.||.+.+.......+ .....+. ...+.. ..... ..+.... ...........+..+.++|.+||+.||.+||
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 273 (284)
T cd07860 197 RRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSLPDYK-PSFPKWA-RQDFSKVVPPLDEDGRDLLSQMLHYDPNKRI 273 (284)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCC-hhhhhhhhHHHHHH-hhccccc-ccCHHHHcccCCHHHHHHHHHhcCCCcccCC
Confidence 99999876654433332 2222221 110000 00000 0000000 0000000113456789999999999999999
Q ss_pred CHHHHHHHHHh
Q 001142 1122 TAGDLYEMFVA 1132 (1142)
Q Consensus 1122 Sa~EVL~~L~~ 1132 (1142)
|+.++++|+||
T Consensus 274 t~~~~l~~~~f 284 (284)
T cd07860 274 SAKAALAHPFF 284 (284)
T ss_pred CHHHHhcCCCC
Confidence 99999999986
No 239
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9.5e-34 Score=316.67 Aligned_cols=281 Identities=23% Similarity=0.288 Sum_probs=199.2
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||.||+|.+. +..+|+|+.... .......+. +.+|+++++.++||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~--~~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~- 73 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLES--EDDKMVKKI----AMREIRMLKQLRHENLVNLIEVFRRKK- 73 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhc--cCcchhhHH----HHHHHHHHHhcCCcchhhHHHhcccCC-
Confidence 36899999999999999999984 567777764322 111112223 368999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|..+... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.
T Consensus 74 -------------~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~ 135 (286)
T cd07846 74 -------------RLYLVFEFVDHTVLDDLEKY-----PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ 135 (286)
T ss_pred -------------eEEEEEecCCccHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC
Confidence 34999999998888877653 235899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||++........ ......++..|+|||++.+ ...++.++||||||+++|||+
T Consensus 136 ~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~~l~el~ 195 (286)
T cd07846 136 S-------GVVKLCDFGFARTLAAPGE----------VYTDYVATRWYRAPELLVG---DTKYGRAVDIWAVGCLVTEML 195 (286)
T ss_pred C-------CcEEEEeeeeeeeccCCcc----------ccCcccceeeccCcHHhcc---ccccCchHhHHHHHHHHHHHH
Confidence 7 7899999999875433211 1123457889999999864 234678999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccc---ccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---HEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||......+....+.................. .....................+..+.+++.+||+.+|++||
T Consensus 196 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 275 (286)
T cd07846 196 TGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRP 275 (286)
T ss_pred cCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccch
Confidence 999999866554433333211111000000000000 00000000000000000114567799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001142 1122 TAGDLYEMFVA 1132 (1142)
Q Consensus 1122 Sa~EVL~~L~~ 1132 (1142)
++.++++|+|+
T Consensus 276 ~~~~il~~~~~ 286 (286)
T cd07846 276 SSSQLLHHEFF 286 (286)
T ss_pred hHHHHhcCCCC
Confidence 99999999986
No 240
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.3e-33 Score=308.75 Aligned_cols=251 Identities=24% Similarity=0.360 Sum_probs=195.4
Q ss_pred CCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
++|.+.+.||+|++|.||+|.+.+ ..+++|... ... ...+. +.+|+.++++++|||++++++++.. +
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~--~~~---~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~-~-- 73 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLK--PGT---MMPEA----FLQEAQIMKKLRHDKLVPLYAVVSE-E-- 73 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcc--cCC---ccHHH----HHHHHHHHHhCCCCCeeeEEEEEcC-C--
Confidence 468999999999999999998854 356666532 211 11123 3789999999999999999988743 2
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.++++. .....+++..+..++.|++.||.|||+.||+|+||||+||+++.+
T Consensus 74 ------------~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~ 138 (260)
T cd05069 74 ------------PIYIVTEFMGKGSLLDFLKE---GDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDN 138 (260)
T ss_pred ------------CcEEEEEcCCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCC
Confidence 23899999999999999975 223458899999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+......... ......++..|+|||...+ ..++.++||||||+++|+|++
T Consensus 139 -------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~Pe~~~~----~~~~~~~Di~slG~~l~el~t 198 (260)
T cd05069 139 -------LVCKIADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELVT 198 (260)
T ss_pred -------CeEEECCCccceEccCCccc---------ccCCCccchhhCCHHHhcc----CCcChHHHHHHHHHHHHHHHh
Confidence 78999999999754321111 1112245678999998865 457899999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|..||.+....+....+.....+..+ ...+..+.+++.+||+.||.+||+++
T Consensus 199 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 251 (260)
T cd05069 199 KGRVPYPGMVNREVLEQVERGYRMPCP---------------------------QGCPESLHELMKLCWKKDPDERPTFE 251 (260)
T ss_pred CCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------cccCHHHHHHHHHHccCCcccCcCHH
Confidence 99999877666655555433221111 13456799999999999999999999
Q ss_pred HHHHHHH
Q 001142 1125 DLYEMFV 1131 (1142)
Q Consensus 1125 EVL~~L~ 1131 (1142)
++++.+.
T Consensus 252 ~i~~~l~ 258 (260)
T cd05069 252 YIQSFLE 258 (260)
T ss_pred HHHHHHh
Confidence 9998765
No 241
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.8e-33 Score=313.28 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=197.7
Q ss_pred CCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
+.+|.+.++||+|+||.||++... +..+++|. .+.. .......+ .+|+++++.++||||++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~--~~~~--~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~ 75 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEA--SESARQDF----QREAELLTVLQHQHIVRFYGV 75 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEe--cCcC--CHHHHHHH----HHHHHHHhcCCCCCCceEEEE
Confidence 457889999999999999999742 23455554 3321 22333344 789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc----------CCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET----------GEKHVSVKLALFIAQDVAAALVELHSK 948 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~----------~~~~ls~~~i~~Ia~qIa~gL~yLHs~ 948 (1142)
+.+... .++||||+++++|.+++...... ....+++..+..++.||+.||+|||++
T Consensus 76 ~~~~~~--------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 141 (280)
T cd05092 76 CTEGRP--------------LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL 141 (280)
T ss_pred EecCCc--------------eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC
Confidence 876543 49999999999999999763210 113588999999999999999999999
Q ss_pred CccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCC
Q 001142 949 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYG 1028 (1142)
Q Consensus 949 gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s 1028 (1142)
||+||||||+|||++.+ +.+||+|||++......... .......+++.|+|||.+.+ ..++
T Consensus 142 ~i~H~dlkp~nil~~~~-------~~~kL~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~ 202 (280)
T cd05092 142 HFVHRDLATRNCLVGQG-------LVVKIGDFGMSRDIYSTDYY--------RVGGRTMLPIRWMPPESILY----RKFT 202 (280)
T ss_pred CeecccccHhhEEEcCC-------CCEEECCCCceeEcCCCcee--------ecCCCccccccccCHHHhcc----CCcC
Confidence 99999999999999876 78999999998654321100 01112345788999999875 4678
Q ss_pred chhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHH
Q 001142 1029 LEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVD 1107 (1142)
Q Consensus 1029 ~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~d 1107 (1142)
.++|||||||++|||++ |.+||......+....+..+..+..+ ..+++.+.+
T Consensus 203 ~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~ 255 (280)
T cd05092 203 TESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERP---------------------------RTCPPEVYA 255 (280)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCC---------------------------CCCCHHHHH
Confidence 99999999999999998 99999876666655555443322111 134566899
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHH
Q 001142 1108 VFRRCTEENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1108 LI~~CL~~DP~~RPSa~EVL~~L~ 1131 (1142)
++.+||+.||.+||++.+|++.+.
T Consensus 256 li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 256 IMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHccCChhhCCCHHHHHHHHh
Confidence 999999999999999999998764
No 242
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1e-33 Score=318.40 Aligned_cols=285 Identities=21% Similarity=0.283 Sum_probs=203.2
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.+++|++.+.||+|+||.||+|.+. +..+++|..+.... . +.+...+.+|+.++++++||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~----~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 76 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKE--K----EGFPITSLREINILLKLQHPNIVTVKEVVVGS 76 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccc--c----ccchhhHHHHHHHHHhcCCCCEEEEEEEEEec
Confidence 3568999999999999999999985 45566666543321 1 11222336899999999999999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+. ...++||||++ ++|.+++... ...+++..+..++.||+.||+|||++||+|+||||+||++
T Consensus 77 ~~------------~~~~lv~e~~~-~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili 139 (293)
T cd07843 77 NL------------DKIYMVMEYVE-HDLKSLMETM----KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL 139 (293)
T ss_pred CC------------CcEEEEehhcC-cCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE
Confidence 21 24599999997 6999988752 2368999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.++|+|||.+........ ......+++.|+|||.+.+. ..++.++||||||+++|+
T Consensus 140 ~~~-------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~~---~~~~~~~Di~slG~~l~~ 199 (293)
T cd07843 140 NNR-------GILKICDFGLAREYGSPLK----------PYTQLVVTLWYRAPELLLGA---KEYSTAIDMWSVGCIFAE 199 (293)
T ss_pred CCC-------CcEEEeecCceeeccCCcc----------ccccccccccccCchhhcCC---ccccchhhHHHHHHHHHH
Confidence 887 7899999999876543211 11223578899999998652 346789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccc---ccccccccCCCCCCchhhh-hhHHHHHHHHHHhcccCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---HEHEVAQSGSGFEKPEAEL-ETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~L~dLI~~CL~~DP~ 1118 (1142)
|++|..||......+....+...........+...... ................... ..++.+.+++.+||+.||+
T Consensus 200 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 279 (293)
T cd07843 200 LLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPA 279 (293)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcc
Confidence 99999999877666655554322211111111111000 0000000000000000000 1467789999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 001142 1119 ERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~ 1132 (1142)
+|||+.|+++|+|+
T Consensus 280 ~R~t~~ell~~~~f 293 (293)
T cd07843 280 KRISAEDALKHPYF 293 (293)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999986
No 243
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.3e-33 Score=314.28 Aligned_cols=257 Identities=32% Similarity=0.495 Sum_probs=200.4
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC---CCCccceeeeEecC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEMYGHKISS 882 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~---HpNIVkl~g~~~~~ 882 (1142)
.|++.+.||+|+||.||+|.+ .+..+++|+..... .....+.+ .+|+.++++++ ||||+++++++.+.
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~----~~e~~~l~~l~~~~~~~vi~~~~~~~~~ 74 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT---PDDDVSDI----QREVALLSQLRQSQPPNITKYYGSYLKG 74 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC---CchhHHHH----HHHHHHHHHhccCCCCCeeeEeeeeeeC
Confidence 478889999999999999997 45678888754321 12223334 68999999986 99999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ..++||||+++++|.++++. ..+++..+..++.|++.||.|||+.||+|+||+|+||++
T Consensus 75 ~--------------~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i 134 (277)
T cd06917 75 P--------------RLWIIMEYAEGGSVRTLMKA------GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV 134 (277)
T ss_pred C--------------EEEEEEecCCCCcHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE
Confidence 4 35999999999999998864 268999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.++|+|||.+........ ......|+..|+|||.+.+ +..++.++|||||||++|+
T Consensus 135 ~~~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~~l~~ 194 (277)
T cd06917 135 TNT-------GNVKLCDFGVAALLNQNSS----------KRSTFVGTPYWMAPEVITE---GKYYDTKADIWSLGITIYE 194 (277)
T ss_pred cCC-------CCEEEccCCceeecCCCcc----------ccccccCCcceeCHHHhcc---CCccccchhHHHHHHHHHH
Confidence 886 7899999999876543211 1123358899999999864 2456789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|..||.+.........+.....+.+.. ...+.++.+++.+||+.||++||+
T Consensus 195 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~i~~~l~~~p~~R~~ 248 (277)
T cd06917 195 MATGNPPYSDVDAFRAMMLIPKSKPPRLED--------------------------NGYSKLLREFVAACLDEEPKERLS 248 (277)
T ss_pred HHhCCCCCCCCChhhhhhccccCCCCCCCc--------------------------ccCCHHHHHHHHHHcCCCcccCcC
Confidence 999999998755443332222211111100 024567899999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001142 1123 AGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1123 a~EVL~~L~~~~ss~ 1137 (1142)
+.++++|.|++....
T Consensus 249 ~~~il~~~~~~~~~~ 263 (277)
T cd06917 249 AEELLKSKWIKAHSK 263 (277)
T ss_pred HHHHhhChHhhcccc
Confidence 999999999976543
No 244
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1e-33 Score=317.25 Aligned_cols=255 Identities=28% Similarity=0.406 Sum_probs=198.5
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||+||++.+. +..+|+|+..... .....+ .+.+|+++++.++||||+++++++....
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 76 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSVRK----QILRELQIMHECRSPYIVSFYGAFLNEN 76 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchHHH----HHHHHHHHHHHcCCCCcceEeeeEecCC
Confidence 357899999999999999999985 6677888754321 112222 3479999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILI 962 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NILl 962 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+ ++++||||||+||++
T Consensus 77 --------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~ 137 (284)
T cd06620 77 --------------NICMCMEFMDCGSLDRIYKK-----GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV 137 (284)
T ss_pred --------------EEEEEEecCCCCCHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE
Confidence 45999999999999999875 2468999999999999999999997 699999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.++|+|||++....... .....|+..|+|||++.+ ..++.++|||||||++|+
T Consensus 138 ~~~-------~~~~l~d~gl~~~~~~~~------------~~~~~~~~~~~aPE~~~~----~~~~~~~Di~slG~~l~~ 194 (284)
T cd06620 138 NSR-------GQIKLCDFGVSGELINSI------------ADTFVGTSTYMSPERIQG----GKYTVKSDVWSLGISIIE 194 (284)
T ss_pred CCC-------CcEEEccCCcccchhhhc------------cCccccCcccCCHHHHcc----CCCCccchHHHHHHHHHH
Confidence 877 789999999886432211 113468999999999865 467889999999999999
Q ss_pred HHhCCCCCCCCCHHH-----------HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001142 1043 LLTLQVPYMGLSELE-----------IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1111 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~e-----------l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~ 1111 (1142)
|++|+.||......+ ....+.....+.++ ....+..+.+++.+
T Consensus 195 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~ 248 (284)
T cd06620 195 LALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP--------------------------SSDFPEDLRDFVDA 248 (284)
T ss_pred HHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC--------------------------chhcCHHHHHHHHH
Confidence 999999997543321 11111111111000 01245678999999
Q ss_pred hcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1112 CTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1112 CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
||+.||++|||+.|+++|+|+...
T Consensus 249 ~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 249 CLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HhcCCcccCcCHHHHhcCcccccc
Confidence 999999999999999999988654
No 245
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.8e-33 Score=312.47 Aligned_cols=266 Identities=25% Similarity=0.420 Sum_probs=199.8
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCCh--HHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSA--DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~--~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.|.+.+.||+|+||.||+|.. .+..+|+|..+........ .........+.+|+.++++++||||+++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 478899999999999999986 4567888875443221111 112222334578999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.++++.. ..+++..+..++.||+.||.|||+++++||||+|+||+++
T Consensus 82 --------------~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~ 142 (272)
T cd06629 82 --------------YLSIFLEYVPGGSIGSCLRTY-----GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD 142 (272)
T ss_pred --------------ceEEEEecCCCCcHHHHHhhc-----cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc
Confidence 349999999999999999762 4689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+......... .......|+..|+|||.+.... ..++.++||||||+++|+|
T Consensus 143 ~~-------~~~~l~d~~~~~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~--~~~~~~~Dv~slG~~l~~l 205 (272)
T cd06629 143 AD-------GICKISDFGISKKSDDIYDN--------DQNMSMQGSVFWMAPEVIHSYS--QGYSAKVDIWSLGCVVLEM 205 (272)
T ss_pred CC-------CeEEEeeccccccccccccc--------cccccccCCccccCHHHhcccc--CCCCccchhHHHHHHHHHH
Confidence 77 78999999998754321100 0112335788999999987521 2478899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHH-hCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~-~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++|..||......+....+. ....+..+. ......+..+.+++.+||..||.+|||
T Consensus 206 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps 262 (272)
T cd06629 206 FAGRRPWSDEEAIAAMFKLGNKRSAPPIPP-----------------------DVSMNLSPVALDFLNACFTINPDNRPT 262 (272)
T ss_pred HhCCCCCcCcchHHHHHHhhccccCCcCCc-----------------------cccccCCHHHHHHHHHHhcCChhhCCC
Confidence 99999997544433222221 111111110 001144667999999999999999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
++++++|+|+
T Consensus 263 ~~~il~~~~~ 272 (272)
T cd06629 263 ARELLQHPFI 272 (272)
T ss_pred HHHHhhCCCC
Confidence 9999999984
No 246
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=3.6e-33 Score=312.41 Aligned_cols=271 Identities=22% Similarity=0.297 Sum_probs=194.0
Q ss_pred Cc-ceeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 808 SL-SSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 808 ~y-~l~~~LG~GsfG~Vy~a~~------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+| ++.+.||+|+||+||++.+ .+..+|+|+..... .......+ .+|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~----~~E~~~l~~l~h~~i~~~~~~~~ 76 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC---GQQNTSGW----KKEINILKTLYHENIVKYKGCCS 76 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc---ChHHHHHH----HHHHHHHHhCCCCCEeeEEEEEe
Confidence 44 8999999999999998764 34567888754321 11222333 78999999999999999999876
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
.... ...++||||+++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||
T Consensus 77 ~~~~------------~~~~lv~e~~~~~~l~~~~~~------~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Ni 138 (283)
T cd05080 77 EQGG------------KGLQLIMEYVPLGSLRDYLPK------HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNV 138 (283)
T ss_pred cCCC------------ceEEEEecCCCCCCHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheE
Confidence 5321 245899999999999999875 3589999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.++|+|||++.......... .......++..|+|||++.+ ..++.++||||||+++
T Consensus 139 li~~~-------~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~~PE~~~~----~~~~~~~Di~slG~~l 200 (283)
T cd05080 139 LLDND-------RLVKIGDFGLAKAVPEGHEYY-------RVREDGDSPVFWYAVECLKE----NKFSYASDVWSFGVTL 200 (283)
T ss_pred EEcCC-------CcEEEeecccccccCCcchhh-------ccCCCCCCCceeeCHhHhcc----cCCCcccccHHHHHHH
Confidence 99877 789999999987654321110 01112235677999999865 4678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|||++|+.||...... ....+............... ...... .......+..+.+++.+||+.||++|
T Consensus 201 ~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~R 268 (283)
T cd05080 201 YELLTHCDSKQSPPKK-FEEMIGPKQGQMTVVRLIEL--------LERGMR---LPCPKNCPQEVYILMKNCWETEAKFR 268 (283)
T ss_pred HHHHhCCCCCCCCcch-hhhhhcccccccchhhhhhh--------hhcCCC---CCCCCCCCHHHHHHHHHHhccChhhC
Confidence 9999999998653321 11111110000000000000 000000 00112456789999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 001142 1121 PTAGDLYEMFVAR 1133 (1142)
Q Consensus 1121 PSa~EVL~~L~~~ 1133 (1142)
||++++++.+...
T Consensus 269 ps~~~i~~~l~~~ 281 (283)
T cd05080 269 PTFRSLIPILKEM 281 (283)
T ss_pred CCHHHHHHHHHHh
Confidence 9999999987654
No 247
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.4e-33 Score=309.99 Aligned_cols=259 Identities=20% Similarity=0.333 Sum_probs=197.5
Q ss_pred CCCcceeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
..+|++.+.||+|+||.||+|.+.. ..+++|+.... ......+.+ ..|+.++++++||||+++++++.
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~----~~e~~~l~~l~h~ni~~~~~~~~ 75 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG---YTEKQRRDF----LSEASIMGQFDHPNIIHLEGVVT 75 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC---CCHHHHHHH----HHHHHHHHhCCCcCcceEEEEEC
Confidence 4568999999999999999998742 24777764321 123333444 78999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+... .++||||+++++|.+++... ...+++..+..++.|++.||.|||++|++|+||||+||
T Consensus 76 ~~~~--------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~ni 137 (269)
T cd05065 76 KSRP--------------VMIITEFMENGALDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNI 137 (269)
T ss_pred CCCc--------------eEEEEecCCCCcHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheE
Confidence 6543 49999999999999998751 24689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+++.+ +.++|+|||.+.......... ..........+..|+|||++.+ ..++.++|||||||++
T Consensus 138 li~~~-------~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~----~~~~~~~DvwslG~~l 201 (269)
T cd05065 138 LVNSN-------LVCKVSDFGLSRFLEDDTSDP-----TYTSSLGGKIPIRWTAPEAIAY----RKFTSASDVWSYGIVM 201 (269)
T ss_pred EEcCC-------CcEEECCCccccccccCcccc-----ccccccCCCcceeecCHhHhcc----CcccchhhhhhhHHHH
Confidence 99876 789999999987543321110 0000011112457999999875 5678999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|||++ |..||......+....+........+ ...+..+.+++.+||+.+|.+
T Consensus 202 ~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~ 254 (269)
T cd05065 202 WEVMSYGERPYWDMSNQDVINAIEQDYRLPPP---------------------------MDCPTALHQLMLDCWQKDRNA 254 (269)
T ss_pred HHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCc---------------------------ccCCHHHHHHHHHHcCCChhh
Confidence 99886 99999877666665555432211110 134566899999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001142 1120 RPTAGDLYEMFVA 1132 (1142)
Q Consensus 1120 RPSa~EVL~~L~~ 1132 (1142)
||++.+|+..+..
T Consensus 255 Rp~~~~i~~~l~~ 267 (269)
T cd05065 255 RPKFGQIVSTLDK 267 (269)
T ss_pred CcCHHHHHHHHHh
Confidence 9999999987653
No 248
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.1e-33 Score=307.39 Aligned_cols=251 Identities=23% Similarity=0.364 Sum_probs=197.0
Q ss_pred CCCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..+|++.+.||+|+||.||+|.+. +..+++|+.. ..... ...+ .+|+++++++.||||+++++++....
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~--~~~~~---~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~- 72 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIR--EGAMS---EEDF----IEEAQVMMKLSHPKLVQLYGVCTERS- 72 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECC--CCCCC---HHHH----HHHHHHHHhCCCCCeeeEEEEEccCC-
Confidence 457899999999999999999885 5667777643 22111 2234 68999999999999999999987544
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ....+++..+..++.|++.||+|||+++++|+||||+||+++.
T Consensus 73 -------------~~~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~ 135 (256)
T cd05112 73 -------------PICLVFEFMEHGCLSDYLRA----QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE 135 (256)
T ss_pred -------------ceEEEEEcCCCCcHHHHHHh----CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC
Confidence 34999999999999999875 1235889999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||.+......... ......++..|+|||.+.+ ..++.++||||||+++|||+
T Consensus 136 ~-------~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~~~~~aPe~~~~----~~~~~~~Dv~slG~~l~el~ 195 (256)
T cd05112 136 N-------QVVKVSDFGMTRFVLDDQYT---------SSTGTKFPVKWSSPEVFSF----SKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred C-------CeEEECCCcceeecccCccc---------ccCCCccchhhcCHhHhcc----CCcChHHHHHHHHHHHHHHH
Confidence 6 78999999998754321100 1112235678999999875 46788999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |..||...........+..+..+..+ ...++.+.+|+.+||+.+|++|||+
T Consensus 196 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~~~l~~~p~~Rp~~ 248 (256)
T cd05112 196 SEGKTPYENRSNSEVVETINAGFRLYKP---------------------------RLASQSVYELMQHCWKERPEDRPSF 248 (256)
T ss_pred cCCCCCCCcCCHHHHHHHHhCCCCCCCC---------------------------CCCCHHHHHHHHHHcccChhhCCCH
Confidence 8 99999876666666555433221111 0234569999999999999999999
Q ss_pred HHHHHHH
Q 001142 1124 GDLYEMF 1130 (1142)
Q Consensus 1124 ~EVL~~L 1130 (1142)
.++++++
T Consensus 249 ~~~l~~l 255 (256)
T cd05112 249 SLLLHQL 255 (256)
T ss_pred HHHHHhh
Confidence 9999875
No 249
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.5e-33 Score=304.33 Aligned_cols=247 Identities=26% Similarity=0.387 Sum_probs=191.0
Q ss_pred eeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGN 891 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~ 891 (1142)
++||+|+||.||+|.. .+..+|+|+.. ... ...... .+.+|+.++++++||||+++++++.....
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~--~~~-~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------- 66 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCK--EDL-PQELKI----KFLSEARILKQYDHPNIVKLIGVCTQRQP------- 66 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecC--CcC-CHHHHH----HHHHHHHHHHhCCCCCcCeEEEEEecCCc-------
Confidence 4799999999999986 34567777643 211 122222 34789999999999999999999876543
Q ss_pred CccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCC
Q 001142 892 PEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADG 971 (1142)
Q Consensus 892 ~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~ 971 (1142)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++.+
T Consensus 67 -------~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~------ 129 (250)
T cd05085 67 -------IYIVMELVPGGDFLSFLRKK----KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGEN------ 129 (250)
T ss_pred -------cEEEEECCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCC------
Confidence 39999999999999998651 2357899999999999999999999999999999999999877
Q ss_pred CCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 001142 972 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPY 1050 (1142)
Q Consensus 972 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf 1050 (1142)
+.+||+|||++........ .......+++.|+|||++.. ..++.++||||||+++|++++ |..||
T Consensus 130 -~~~~l~d~g~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~ll~~~~~~g~~p~ 195 (250)
T cd05085 130 -NVLKISDFGMSRQEDDGIY---------SSSGLKQIPIKWTAPEALNY----GRYSSESDVWSYGILLWETFSLGVCPY 195 (250)
T ss_pred -CeEEECCCccceecccccc---------ccCCCCCCcccccCHHHhcc----CCCCchhHHHHHHHHHHHHhcCCCCCC
Confidence 7899999999865332110 01112234677999999865 457889999999999999998 99999
Q ss_pred CCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 001142 1051 MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF 1130 (1142)
Q Consensus 1051 ~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L 1130 (1142)
...........+..+.....+ ...+..+.+++.+||..+|.+||++.|+++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 196 PGMTNQQAREQVEKGYRMSCP---------------------------QKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred CCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 877665555554433221111 13456799999999999999999999999876
Q ss_pred H
Q 001142 1131 V 1131 (1142)
Q Consensus 1131 ~ 1131 (1142)
.
T Consensus 249 ~ 249 (250)
T cd05085 249 A 249 (250)
T ss_pred c
Confidence 3
No 250
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.1e-34 Score=328.47 Aligned_cols=263 Identities=22% Similarity=0.338 Sum_probs=199.1
Q ss_pred CCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~ 884 (1142)
..|++.++||.||.+.||++... .+.+|+|.+.+. .........| ..|+..|.+|+ |.+||++|+|-..+++
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~--~~D~qtl~gy----~nEI~lL~KLkg~~~IIqL~DYEv~d~~ 434 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLL--EADNQTLDGY----RNEIALLNKLKGHDKIIQLYDYEVTDGY 434 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHh--hcCHHHHHHH----HHHHHHHHHhcCCceEEEEeeeeccCce
Confidence 35999999999999999999874 344555433222 2234445556 89999999996 9999999999887765
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+ ||||||-+ .+|..++++. ....+...++.+..||+.|+.++|.+||||.||||.|+|+-.
T Consensus 435 l--------------YmvmE~Gd-~DL~kiL~k~----~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk 495 (677)
T KOG0596|consen 435 L--------------YMVMECGD-IDLNKILKKK----KSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK 495 (677)
T ss_pred E--------------EEEeeccc-ccHHHHHHhc----cCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe
Confidence 4 99999986 8999999872 223343488899999999999999999999999999998854
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC-------CCCCchhhHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP-------NLYGLEVDIWSYG 1037 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~-------~~~s~ksDVwSLG 1037 (1142)
|.+||+|||.|..+...... ......+||+.||+||.+..+... -..+.++||||+|
T Consensus 496 --------G~LKLIDFGIA~aI~~DTTs--------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLG 559 (677)
T KOG0596|consen 496 --------GRLKLIDFGIANAIQPDTTS--------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLG 559 (677)
T ss_pred --------eeEEeeeechhcccCccccc--------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhh
Confidence 78999999999876543211 233456899999999999875432 1267899999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1038 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
||||+|+.|+.||... ...+..+.....|... .+.+.. ....++.+++..||+.||
T Consensus 560 CILYqMvYgktPf~~~--~n~~aKl~aI~~P~~~--------------------Iefp~~--~~~~~li~~mK~CL~rdP 615 (677)
T KOG0596|consen 560 CILYQMVYGKTPFGQI--INQIAKLHAITDPNHE--------------------IEFPDI--PENDELIDVMKCCLARDP 615 (677)
T ss_pred hHHHHHHhcCCchHHH--HHHHHHHHhhcCCCcc--------------------ccccCC--CCchHHHHHHHHHHhcCc
Confidence 9999999999999743 2233333333322211 111111 112238999999999999
Q ss_pred CCCCCHHHHHHHHHhhc
Q 001142 1118 TERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~ 1134 (1142)
.+|||+.|+|+|+|...
T Consensus 616 kkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 616 KKRWSIPELLQHPFLQI 632 (677)
T ss_pred ccCCCcHHHhcCccccc
Confidence 99999999999999875
No 251
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.1e-33 Score=315.87 Aligned_cols=295 Identities=17% Similarity=0.202 Sum_probs=202.7
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.+++|++.++||+|+||.||+|.. .+..+|+|....... ... +...+.+|+.++++++||||+++++++...
T Consensus 10 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~--~~~----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 83 (310)
T cd07865 10 EVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE--KEG----FPITALREIKILQLLKHENVVNLIEICRTK 83 (310)
T ss_pred hhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC--cCC----chhHHHHHHHHHHhCCCCCccceEEEEecc
Confidence 456899999999999999999998 466788887543321 111 112235799999999999999999998764
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
... ........++||||+. ++|.+++.. ....+++..+..++.||+.||+|||++||+|+||||+||++
T Consensus 84 ~~~------~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~ 152 (310)
T cd07865 84 ATP------YNRYKGSFYLVFEFCE-HDLAGLLSN----KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI 152 (310)
T ss_pred ccc------ccCCCceEEEEEcCCC-cCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE
Confidence 321 1112335699999996 688888764 22368999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||.+.......... ........++..|+|||.+.+ ...++.++||||||+++|+
T Consensus 153 ~~~-------~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~~l~e 216 (310)
T cd07865 153 TKD-------GILKLADFGLARAFSLSKNSK------PNRYTNRVVTLWYRPPELLLG---ERDYGPPIDMWGAGCIMAE 216 (310)
T ss_pred CCC-------CcEEECcCCCcccccCCcccC------CCCccCcccCccccCcHHhcC---CcccCchhhhHHHHHHHHH
Confidence 877 789999999997654322110 011123357889999999865 2346789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccccc-ccccCCCCCCch---hhhhhHHHHHHHHHHhcccCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHE-VAQSGSGFEKPE---AELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
|++|..||.+.........+........+..++......... ............ .....+..+.++|.+||..||.
T Consensus 217 l~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~ 296 (310)
T cd07865 217 MWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPA 296 (310)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChh
Confidence 999999998776655444442211111000000000000000 000000000000 0001245678999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 001142 1119 ERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~ 1132 (1142)
+|||++|+++|+|+
T Consensus 297 ~R~t~~e~l~h~~f 310 (310)
T cd07865 297 KRIDADTALNHDFF 310 (310)
T ss_pred hccCHHHHhcCCCC
Confidence 99999999999986
No 252
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=4.1e-33 Score=309.98 Aligned_cols=252 Identities=27% Similarity=0.454 Sum_probs=189.4
Q ss_pred eeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.||+|+||.||+|.+.. ..+.++++..+... .....+.+ .+|+.++.++ +||||+++++++.....
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~----~~E~~~l~~l~~h~~iv~~~~~~~~~~~----- 70 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDF----AGELEVLCKLGHHPNIINLLGACEHRGY----- 70 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHH----HHHHHHHHhhccCCCeeeEEEEEecCCC-----
Confidence 468999999999999743 33334444333211 12222333 7899999999 79999999999886553
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhc-----------cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-----------~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
.++||||+++++|.+++..... .....+++..+..++.|++.||+|||++|++||||||+
T Consensus 71 ---------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~ 141 (270)
T cd05047 71 ---------LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR 141 (270)
T ss_pred ---------ceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccc
Confidence 3999999999999999975321 11235789999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
||+++.+ +.+||+|||++....... .......+..|+|||++.. ..++.++|||||||
T Consensus 142 nili~~~-------~~~kl~dfgl~~~~~~~~-----------~~~~~~~~~~y~apE~~~~----~~~~~~~Di~slG~ 199 (270)
T cd05047 142 NILVGEN-------YVAKIADFGLSRGQEVYV-----------KKTMGRLPVRWMAIESLNY----SVYTTNSDVWSYGV 199 (270)
T ss_pred eEEEcCC-------CeEEECCCCCccccchhh-----------hccCCCCccccCChHHHcc----CCCCchhhHHHHHH
Confidence 9999887 789999999985322100 0111224567999999865 56789999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
++|||++ |..||.+.+..+....+........+ ...+..+.+++.+||+.||
T Consensus 200 il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p 252 (270)
T cd05047 200 LLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP---------------------------LNCDDEVYDLMRQCWREKP 252 (270)
T ss_pred HHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCC---------------------------CcCCHHHHHHHHHHcccCh
Confidence 9999997 99999876665555554332211110 1334568999999999999
Q ss_pred CCCCCHHHHHHHHHh
Q 001142 1118 TERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~ 1132 (1142)
.+|||+.++++.+..
T Consensus 253 ~~Rps~~~il~~l~~ 267 (270)
T cd05047 253 YERPSFAQILVSLNR 267 (270)
T ss_pred hhCCCHHHHHHHHHH
Confidence 999999999998754
No 253
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=361.95 Aligned_cols=265 Identities=28% Similarity=0.430 Sum_probs=212.8
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
++.-...||.|.||.||-|... +...|+|-.++. .......+.. .+|+.++..++|||+|++||+-...+.
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq--~~~~k~~~~i----~eEm~vlE~lnHpNlV~YyGVEvHRek- 1308 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQ--DSDHKTFKLI----AEEMKVLEGLNHPNLVRYYGVEVHREK- 1308 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcC--ccccccCcch----HHHHHHHHhccCccccccCceeecHHH-
Confidence 3567789999999999999974 445555543333 2222333333 789999999999999999998766543
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.+|.||||++|+|.++++. ....++.....+..|++.|+.|||++|||||||||.||+++.+
T Consensus 1309 -------------v~IFMEyC~~GsLa~ll~~-----gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~ 1370 (1509)
T KOG4645|consen 1309 -------------VYIFMEYCEGGSLASLLEH-----GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN 1370 (1509)
T ss_pred -------------HHHHHHHhccCcHHHHHHh-----cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC
Confidence 3899999999999999986 3457888888899999999999999999999999999999988
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+|++|||.|..+.....+.. ......+||+.|||||++.+... ....-+.||||+|||+.||+|
T Consensus 1371 -------g~iK~~DFGsa~ki~~~~~~~~------~el~~~~GT~~YMAPEvit~t~~-kG~~~A~DiWslGCVVlEM~t 1436 (1509)
T KOG4645|consen 1371 -------GLIKYGDFGSAVKIKNNAQTMP------GELQSMMGTPMYMAPEVITGTKG-KGHGGAADIWSLGCVVLEMAT 1436 (1509)
T ss_pred -------CcEEeecccceeEecCchhcCC------HHHHhhcCCchhcCchhhccccc-CCCCcchhhhcccceEEEeec
Confidence 8999999999988765432221 22345689999999999987442 345678999999999999999
Q ss_pred CCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 LQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 G~~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|+.||... +..++...+..|..|.++.. .+.+-+++|.+||+.||++|+++.
T Consensus 1437 GkrPW~~~dne~aIMy~V~~gh~Pq~P~~---------------------------ls~~g~dFle~Cl~~dP~~Rw~~~ 1489 (1509)
T KOG4645|consen 1437 GKRPWAELDNEWAIMYHVAAGHKPQIPER---------------------------LSSEGRDFLEHCLEQDPKMRWTAS 1489 (1509)
T ss_pred CCCchhhccchhHHHhHHhccCCCCCchh---------------------------hhHhHHHHHHHHHhcCchhhhHHH
Confidence 99999764 34566777788888777653 455689999999999999999999
Q ss_pred HHHHHHHhhcCCCC
Q 001142 1125 DLYEMFVARTSSSI 1138 (1142)
Q Consensus 1125 EVL~~L~~~~ss~~ 1138 (1142)
|+++|-|-+...+.
T Consensus 1490 qlle~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1490 QLLEHAFGKSCTDE 1503 (1509)
T ss_pred HHHHhhcccccccc
Confidence 99999888765443
No 254
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3.2e-33 Score=312.42 Aligned_cols=245 Identities=22% Similarity=0.350 Sum_probs=181.2
Q ss_pred eecccCceEEEEEEEC------------------------C--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC
Q 001142 814 EAGKSVSSSLFRCKFG------------------------S--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL 867 (1142)
Q Consensus 814 ~LG~GsfG~Vy~a~~~------------------------~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L 867 (1142)
.||+|+||.||+|.+. + ..+++|+ ++.. ... ....+.+|+.+++.+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~--~~~~--~~~----~~~~~~~~~~~~~~l 73 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKV--LDPS--HRD----IALAFFETASLMSQV 73 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEe--cChH--HHH----HHHHHHHHHHHHhcC
Confidence 6999999999998752 1 1244444 3211 111 122346889999999
Q ss_pred CCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001142 868 RHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS 947 (1142)
Q Consensus 868 ~HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs 947 (1142)
+||||+++++++..... .++||||+++++|..++.. ....+++..+..++.||+.||+|||+
T Consensus 74 ~h~niv~~~~~~~~~~~--------------~~lv~ey~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~ 135 (274)
T cd05076 74 SHIHLAFVHGVCVRGSE--------------NIMVEEFVEHGPLDVCLRK----EKGRVPVAWKITVAQQLASALSYLED 135 (274)
T ss_pred CCCCeeeEEEEEEeCCc--------------eEEEEecCCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 99999999999886553 3999999999999998864 23468899999999999999999999
Q ss_pred CCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC
Q 001142 948 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1027 (1142)
Q Consensus 948 ~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1027 (1142)
+||+||||||+|||++..+........+|++|||.+...... ....++..|+|||.+.+ ...+
T Consensus 136 ~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~--------------~~~~~~~~~~aPe~~~~---~~~~ 198 (274)
T cd05076 136 KNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR--------------EERVERIPWIAPECVPG---GNSL 198 (274)
T ss_pred CCccCCCCCcccEEEeccCcccCccceeeecCCccccccccc--------------cccccCCcccCchhhcC---CCCC
Confidence 999999999999999865322222346899999987532211 12247788999998865 2457
Q ss_pred CchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001142 1028 GLEVDIWSYGCLLLELL-TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1106 (1142)
Q Consensus 1028 s~ksDVwSLGviL~ELL-tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1106 (1142)
+.++|||||||++|||+ +|+.||......+....+..... .+ . ...+.+.
T Consensus 199 ~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~----------------------~-----~~~~~~~ 249 (274)
T cd05076 199 STAADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHR--LP----------------------E-----PSCKELA 249 (274)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhccC--CC----------------------C-----CCChHHH
Confidence 89999999999999985 69999986554443222211100 00 0 1234589
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHH
Q 001142 1107 DVFRRCTEENPTERPTAGDLYEMF 1130 (1142)
Q Consensus 1107 dLI~~CL~~DP~~RPSa~EVL~~L 1130 (1142)
+++.+||+.+|++|||+.++++++
T Consensus 250 ~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 250 TLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHHcccChhhCcCHHHHHHhh
Confidence 999999999999999999999876
No 255
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3.1e-33 Score=313.91 Aligned_cols=282 Identities=19% Similarity=0.247 Sum_probs=198.3
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
..+++|++.+.||+|++|.||+|.. .+..+++|......... .... +.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~---~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~ 74 (291)
T cd07844 2 GKLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG---APFT----AIREASLLKDLKHANIVTLHDIIHT 74 (291)
T ss_pred CCccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC---Cchh----HHHHHHHHhhCCCcceeeEEEEEec
Confidence 3467899999999999999999987 45678888754332111 1112 2589999999999999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+ +.++||||++ ++|.+++.+. ...+++..+..++.||+.||.|||++||+||||||+||+
T Consensus 75 ~~--------------~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil 135 (291)
T cd07844 75 KK--------------TLTLVFEYLD-TDLKQYMDDC----GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLL 135 (291)
T ss_pred CC--------------eEEEEEecCC-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEE
Confidence 54 3499999998 5999988752 236899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||.++........ .....++..|+|||++.+ ...++.++||||||+++|
T Consensus 136 ~~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~~~aPE~~~~---~~~~~~~~Dv~slG~il~ 195 (291)
T cd07844 136 ISER-------GELKLADFGLARAKSVPSKT----------YSNEVVTLWYRPPDVLLG---STEYSTSLDMWGVGCIFY 195 (291)
T ss_pred EcCC-------CCEEECccccccccCCCCcc----------ccccccccccCCcHHhhc---CcccCcHHHHHHHHHHHH
Confidence 9887 78999999998653221110 112246788999999865 235788999999999999
Q ss_pred HHHhCCCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCch-----hhhhhHHHHHHHHHHhccc
Q 001142 1042 ELLTLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE-----AELETLSFLVDVFRRCTEE 1115 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~L~dLI~~CL~~ 1115 (1142)
+|++|+.||.+.. ..+....+...........+.............. ....... ........+.+++.+||+.
T Consensus 196 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 274 (291)
T cd07844 196 EMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSF-PFYPPRPLINHAPRLDRIPHGEELALKFLQY 274 (291)
T ss_pred HHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccc-cccCChhHHHhCcCCCCchhHHHHHHHHhcc
Confidence 9999999997654 2222222211111111111111100000000000 0000000 0011226788999999999
Q ss_pred CCCCCCCHHHHHHHHHh
Q 001142 1116 NPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1116 DP~~RPSa~EVL~~L~~ 1132 (1142)
+|.+|||+.|++.|+||
T Consensus 275 ~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 275 EPKKRISAAEAMKHPYF 291 (291)
T ss_pred CcccccCHHHHhcCCCC
Confidence 99999999999999986
No 256
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4.7e-33 Score=308.97 Aligned_cols=254 Identities=22% Similarity=0.334 Sum_probs=196.7
Q ss_pred CCcceeeeecccCceEEEEEEECCc-----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGSA-----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~~-----~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
.+|.+.++||+|+||.||+|.+... .+++|..... . .....+.+ .+|+.++++++||||+++++++.+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~--~-~~~~~~~~----~~e~~~l~~~~h~~i~~~~~~~~~ 78 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC--T-SPSVREKF----LQEAYIMRQFDHPHIVKLIGVITE 78 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCc--C-CHHHHHHH----HHHHHHHHhCCCCchhceeEEEcC
Confidence 4588999999999999999987432 4555654322 1 12223334 789999999999999999998764
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
. ..++||||+++++|.+++... ...+++..+..++.|++.||+|||++|++||||||+||+
T Consensus 79 ~---------------~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nil 139 (270)
T cd05056 79 N---------------PVWIVMELAPLGELRSYLQVN----KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVL 139 (270)
T ss_pred C---------------CcEEEEEcCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEE
Confidence 2 238999999999999999751 235899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.++|+|||++......... ......++..|+|||.+.. ..++.++||||||+++|
T Consensus 140 i~~~-------~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~ 199 (270)
T cd05056 140 VSSP-------DCVKLGDFGLSRYLEDESYY---------KASKGKLPIKWMAPESINF----RRFTSASDVWMFGVCMW 199 (270)
T ss_pred EecC-------CCeEEccCceeeecccccce---------ecCCCCccccccChhhhcc----CCCCchhhhHHHHHHHH
Confidence 9877 78999999998765432110 0011234567999998865 46789999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1042 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1042 ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
||++ |..||.+....+....+..+..+..+ ...+..+.+++.+|+..+|.+|
T Consensus 200 el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~P~~R 252 (270)
T cd05056 200 EILMLGVKPFQGVKNNDVIGRIENGERLPMP---------------------------PNCPPTLYSLMTKCWAYDPSKR 252 (270)
T ss_pred HHHHcCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHcCCChhhC
Confidence 9986 99999877666655555444322211 1345679999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 001142 1121 PTAGDLYEMFVAR 1133 (1142)
Q Consensus 1121 PSa~EVL~~L~~~ 1133 (1142)
||+.++++.+...
T Consensus 253 pt~~~~~~~l~~~ 265 (270)
T cd05056 253 PRFTELKAQLSDI 265 (270)
T ss_pred cCHHHHHHHHHHH
Confidence 9999999987654
No 257
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4.2e-33 Score=307.27 Aligned_cols=254 Identities=25% Similarity=0.388 Sum_probs=198.5
Q ss_pred CCCCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.-++|++.++||+|+||.||+|.+.+ ..+++|... .... ..+++ .+|+.++++++||||+++++++....
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~--~~~~---~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 74 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLK--PGTM---SPEAF----LQEAQIMKKLRHDKLVQLYAVCSEEE 74 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEec--CCcc---CHHHH----HHHHHHHhhCCCCCEeeeeeeeecCC
Confidence 34679999999999999999998743 456776643 2111 12334 78999999999999999999987644
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++||||+++++|.+++.. .....+++..+..++.||+.||.|||++||+|+||||+||+++
T Consensus 75 ~--------------~~~v~e~~~~~~L~~~i~~---~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~ 137 (261)
T cd05034 75 P--------------IYIVTEYMSKGSLLDFLKS---GEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG 137 (261)
T ss_pred c--------------eEEEEeccCCCCHHHHHhc---cccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc
Confidence 3 4999999999999999975 2234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+......... ......++..|+|||.+.+ ..++.++||||||+++|+|
T Consensus 138 ~~-------~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~il~~l 197 (261)
T cd05034 138 EN-------LVCKIADFGLARLIEDDEYT---------AREGAKFPIKWTAPEAANY----GRFTIKSDVWSFGILLTEI 197 (261)
T ss_pred CC-------CCEEECccccceeccchhhh---------hhhccCCCccccCHHHhcc----CCcCchhHHHHHHHHHHHH
Confidence 87 78999999998765431110 0112234568999999875 4578999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |+.||.+.........+..+.....+ ...+..+.+++.+||+.+|.+||+
T Consensus 198 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~Rp~ 250 (261)
T cd05034 198 VTYGRVPYPGMTNREVLEQVERGYRMPRP---------------------------PNCPEELYDLMLQCWDKDPEERPT 250 (261)
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcccCcccCCC
Confidence 98 99999877666666555433221111 023556899999999999999999
Q ss_pred HHHHHHHHH
Q 001142 1123 AGDLYEMFV 1131 (1142)
Q Consensus 1123 a~EVL~~L~ 1131 (1142)
++++.+.+.
T Consensus 251 ~~~l~~~l~ 259 (261)
T cd05034 251 FEYLQSFLE 259 (261)
T ss_pred HHHHHHHHh
Confidence 999998654
No 258
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=7.1e-33 Score=311.10 Aligned_cols=267 Identities=29% Similarity=0.443 Sum_probs=202.3
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|+..++||.|++|.||+|.+ .+..+++|+..... ....... +.+|++++++++||||+++++++.+...
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~---~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 73 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDP---NPDLQKQ----ILRELEINKSCKSPYIVKYYGAFLDESS 73 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCC---chHHHHH----HHHHHHHHHhCCCCCeeeeeeEEEccCC
Confidence 3688999999999999999998 45677777754321 1122233 3789999999999999999999865321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
...++||||+++++|.+++..... ....+++..+..++.||+.||.|||+.|++|+||+|+||+++.
T Consensus 74 ------------~~~~lv~e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~ 140 (287)
T cd06621 74 ------------SSIGIAMEYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR 140 (287)
T ss_pred ------------CeEEEEEEecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec
Confidence 246999999999999998875433 2356899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||++....... .....++..|+|||.+.+ ..++.++||||||+++|+|+
T Consensus 141 ~-------~~~~l~dfg~~~~~~~~~------------~~~~~~~~~y~~pE~~~~----~~~~~~~Dv~slG~il~~l~ 197 (287)
T cd06621 141 K-------GQVKLCDFGVSGELVNSL------------AGTFTGTSFYMAPERIQG----KPYSITSDVWSLGLTLLEVA 197 (287)
T ss_pred C-------CeEEEeeccccccccccc------------cccccCCccccCHHHhcC----CCCCchhhHHHHHHHHHHHH
Confidence 7 789999999986543211 112347888999999875 46788999999999999999
Q ss_pred hCCCCCCCCC-----HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1045 TLQVPYMGLS-----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1045 tG~~Pf~~~~-----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|+.||.... ..+....+.....+.+... +......++.+.+++.+||+.+|.+
T Consensus 198 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~li~~~l~~~p~~ 256 (287)
T cd06621 198 QNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDE---------------------PGNGIKWSEEFKDFIKQCLEKDPTR 256 (287)
T ss_pred hCCCCCCcccCCCCChHHHHHHHhcCCchhhccC---------------------CCCCCchHHHHHHHHHHHcCCCccc
Confidence 9999997542 2223333222111111100 0000134567999999999999999
Q ss_pred CCCHHHHHHHHHhhcCCC
Q 001142 1120 RPTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ss~ 1137 (1142)
|||+.|+++|+|++....
T Consensus 257 Rpt~~eil~~~~~~~~~~ 274 (287)
T cd06621 257 RPTPWDMLEHPWIKAQMK 274 (287)
T ss_pred CCCHHHHHhCcccccccc
Confidence 999999999999975543
No 259
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.3e-33 Score=310.27 Aligned_cols=262 Identities=24% Similarity=0.331 Sum_probs=201.1
Q ss_pred CCCcceeeeecccCceEEEEEEECC------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
-++|++.+.||+|+||.||+|.+.. ..+++|+. .. .......+.+ .+|+.++++++||||+++++++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~--~~-~~~~~~~~~~----~~e~~~l~~l~h~ni~~~~~~~ 77 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTV--KD-HASEIQVTLL----LQESCLLYGLSHQNILPILHVC 77 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEc--cC-CCCHHHHHHH----HHHHHHHHhCCCCCCCeEEEEE
Confidence 4578999999999999999999854 55666653 22 1223333333 7899999999999999999987
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 956 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~---~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLK 956 (1142)
...+. ..++++||+++++|.+++...... ....+++..+..++.||+.||+|||+++++|||||
T Consensus 78 ~~~~~-------------~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~ 144 (280)
T cd05043 78 IEDGE-------------PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIA 144 (280)
T ss_pred ecCCC-------------CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence 65321 248999999999999999763221 11468999999999999999999999999999999
Q ss_pred CCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001142 957 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1036 (1142)
Q Consensus 957 p~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSL 1036 (1142)
|+||+++.+ +.+||+|||+++.+....... ......++..|+|||++.+ ..++.++|||||
T Consensus 145 p~nil~~~~-------~~~kl~d~g~~~~~~~~~~~~--------~~~~~~~~~~y~apE~~~~----~~~~~~~Di~sl 205 (280)
T cd05043 145 ARNCVIDEE-------LQVKITDNALSRDLFPMDYHC--------LGDNENRPVKWMALESLVN----KEYSSASDVWSF 205 (280)
T ss_pred HhhEEEcCC-------CcEEECCCCCcccccCCceEE--------eCCCCCcchhccCHHHHhc----CCCCchhhHHHh
Confidence 999999877 789999999997543321110 0112245678999999875 467899999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 001142 1037 GCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE 1115 (1142)
Q Consensus 1037 GviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~ 1115 (1142)
|+++||+++ |+.||......+....+..+..+... ...++.+.+++.+||..
T Consensus 206 G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~ 258 (280)
T cd05043 206 GVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQP---------------------------INCPDELFAVMACCWAL 258 (280)
T ss_pred HHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCC---------------------------CcCCHHHHHHHHHHcCC
Confidence 999999999 99999877666655554433221110 13456789999999999
Q ss_pred CCCCCCCHHHHHHHHHhh
Q 001142 1116 NPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1116 DP~~RPSa~EVL~~L~~~ 1133 (1142)
||++|||+.++++.+...
T Consensus 259 ~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 259 DPEERPSFSQLVQCLTDF 276 (280)
T ss_pred ChhhCCCHHHHHHHHHHH
Confidence 999999999999987654
No 260
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=6.4e-33 Score=306.45 Aligned_cols=252 Identities=22% Similarity=0.390 Sum_probs=197.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
-++|++.++||+|+||.||+|.+. +..+++|.... .....+.+ .+|+.++++++|+||+++++++.. .
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~-----~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~-~- 73 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-----GSMSVEAF----LAEANVMKTLQHDKLVKLHAVVTK-E- 73 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCC-----ChhHHHHH----HHHHHHHHhcCCCCcceEEEEEcC-C-
Confidence 457899999999999999999874 45577775431 12223334 789999999999999999998765 2
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. .....+++..+..++.|++.||.|||+.|++|+||||+||+++.
T Consensus 74 -------------~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~ 137 (260)
T cd05073 74 -------------PIYIITEFMAKGSLLDFLKS---DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 137 (260)
T ss_pred -------------CeEEEEEeCCCCcHHHHHHh---CCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC
Confidence 24899999999999999976 22346788999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||.+......... ......++..|+|||++.. ..++.++|||||||++|+++
T Consensus 138 ~-------~~~~l~d~~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~~l~~l~ 197 (260)
T cd05073 138 S-------LVCKIADFGLARVIEDNEYT---------AREGAKFPIKWTAPEAINF----GSFTIKSDVWSFGILLMEIV 197 (260)
T ss_pred C-------CcEEECCCcceeeccCCCcc---------cccCCcccccccCHhHhcc----CCcCccccchHHHHHHHHHH
Confidence 7 78999999998754331111 1112235677999999865 46788999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |..||.+.+..+....+..+...... ...+..+.+++.+||+.+|++||++
T Consensus 198 t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~Rp~~ 250 (260)
T cd05073 198 TYGRIPYPGMSNPEVIRALERGYRMPRP---------------------------ENCPEELYNIMMRCWKNRPEERPTF 250 (260)
T ss_pred hcCCCCCCCCCHHHHHHHHhCCCCCCCc---------------------------ccCCHHHHHHHHHHcccCcccCcCH
Confidence 9 99999877666555555433221110 1345569999999999999999999
Q ss_pred HHHHHHHH
Q 001142 1124 GDLYEMFV 1131 (1142)
Q Consensus 1124 ~EVL~~L~ 1131 (1142)
.++++.|.
T Consensus 251 ~~l~~~L~ 258 (260)
T cd05073 251 EYIQSVLD 258 (260)
T ss_pred HHHHHHHh
Confidence 99998764
No 261
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4.3e-33 Score=320.30 Aligned_cols=260 Identities=23% Similarity=0.375 Sum_probs=200.1
Q ss_pred CcceeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 877 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~---------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g 877 (1142)
+|++.+.||+|+||.||+|.+.+ ..+|+|+.... ......+.+ .+|+.+++++ +||||+++++
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~----~~E~~~l~~l~~h~~iv~~~~ 85 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD---ATDKDLSDL----VSEMEMMKMIGKHKNIINLLG 85 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc---cCHHHHHHH----HHHHHHHHhhcCCCCeeeeeE
Confidence 58999999999999999998621 24666654321 122233344 7899999999 7999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----------cCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELH 946 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-----------~~~~~ls~~~i~~Ia~qIa~gL~yLH 946 (1142)
++...+. .++||||+++++|.+++..... .....+++..+..++.||+.||.|||
T Consensus 86 ~~~~~~~--------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH 151 (334)
T cd05100 86 ACTQDGP--------------LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA 151 (334)
T ss_pred EEccCCc--------------eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH
Confidence 9876543 4999999999999999975321 11235788999999999999999999
Q ss_pred hCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001142 947 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1026 (1142)
Q Consensus 947 s~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1026 (1142)
++||+||||||+|||++.+ +.+||+|||.++......... ......++..|+|||++.+ ..
T Consensus 152 ~~givH~dlkp~Nill~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~ 212 (334)
T cd05100 152 SQKCIHRDLAARNVLVTED-------NVMKIADFGLARDVHNIDYYK--------KTTNGRLPVKWMAPEALFD----RV 212 (334)
T ss_pred HCCeeccccccceEEEcCC-------CcEEECCcccceecccccccc--------cccCCCcCceEcCHHHhcc----CC
Confidence 9999999999999999877 789999999997654321110 0111234567999999875 56
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHH
Q 001142 1027 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1105 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1105 (1142)
++.++||||||+++|||++ |..||.+.+..+....+.....+..+ ...+..+
T Consensus 213 ~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l 265 (334)
T cd05100 213 YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP---------------------------ANCTHEL 265 (334)
T ss_pred cCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHH
Confidence 7899999999999999998 88999887776666655443222111 1334568
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1106 VDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1106 ~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
.+++.+||+.+|.+|||+.|+++++....
T Consensus 266 ~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 266 YMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 99999999999999999999999988665
No 262
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.9e-33 Score=306.59 Aligned_cols=256 Identities=21% Similarity=0.348 Sum_probs=196.6
Q ss_pred CCcceeeeecccCceEEEEEEEC--Cc---cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SA---DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~---~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
.+|+..+.||+|+||.||+|+.. +. .+++|.. +... .....+.+ ..|++++++++||||+++++++.+
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~--~~~~-~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~ 77 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTL--KPGY-TEKQRQDF----LSEASIMGQFSHHNIIRLEGVVTK 77 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEec--cccC-CHHHHHHH----HHHHHHHhcCCCCCeeEEEEEEcc
Confidence 46889999999999999999873 22 3555543 3221 22233334 789999999999999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+. .++||||+++++|.+++.. ....+++..+..++.|++.||+|||+.||+||||||+||+
T Consensus 78 ~~~--------------~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil 139 (268)
T cd05063 78 FKP--------------AMIITEYMENGALDKYLRD----HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNIL 139 (268)
T ss_pred CCC--------------cEEEEEcCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEE
Confidence 543 4999999999999999875 1246899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||++.......... ........+..|+|||++.. ..++.++|||||||++|
T Consensus 140 i~~~-------~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~----~~~~~~~Dv~slG~il~ 201 (268)
T cd05063 140 VNSN-------LECKVSDFGLSRVLEDDPEGT-------YTTSGGKIPIRWTAPEAIAY----RKFTSASDVWSFGIVMW 201 (268)
T ss_pred EcCC-------CcEEECCCccceecccccccc-------eeccCCCcCceecCHHHhhc----CCcChHhHHHHHHHHHH
Confidence 9876 789999999987553321110 00011123457999999875 45789999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1042 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1042 ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
||++ |..||......+....+..+...... ...+..+.+++.+||+.+|.+|
T Consensus 202 ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~~li~~c~~~~p~~R 254 (268)
T cd05063 202 EVMSFGERPYWDMSNHEVMKAINDGFRLPAP---------------------------MDCPSAVYQLMLQCWQQDRARR 254 (268)
T ss_pred HHHhCCCCCCCcCCHHHHHHHHhcCCCCCCC---------------------------CCCCHHHHHHHHHHcCCCcccC
Confidence 9997 99999876666666665433221110 1345668999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001142 1121 PTAGDLYEMFVA 1132 (1142)
Q Consensus 1121 PSa~EVL~~L~~ 1132 (1142)
|++.+|++.+..
T Consensus 255 p~~~~i~~~l~~ 266 (268)
T cd05063 255 PRFVDIVNLLDK 266 (268)
T ss_pred cCHHHHHHHHHh
Confidence 999999998754
No 263
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.1e-33 Score=316.00 Aligned_cols=300 Identities=20% Similarity=0.213 Sum_probs=205.7
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.+++|++.++||+|+||.||+|.+. +..+++|+......... .... +.+|++++++++||||+++++++.+.
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~--~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG--FPIT----ALREIKILKKLKHPNVVPLIDMAVER 79 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC--cchh----HHHHHHHHHhcCCCCccchhhheecc
Confidence 4688999999999999999999984 56677877544322111 1112 25899999999999999999987654
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
... ........++||||+. ++|...+.. ....+++..+..++.||+.||.|||++||+|+||||+||++
T Consensus 80 ~~~------~~~~~~~~~lv~~~~~-~~l~~~~~~----~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~ 148 (311)
T cd07866 80 PDK------SKRKRGSVYMVTPYMD-HDLSGLLEN----PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI 148 (311)
T ss_pred ccc------ccccCceEEEEEecCC-cCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 321 0112336799999997 677777653 23469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCccccccccccccccc-CCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH-RGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~-~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
+.+ +.++|+|||++.............. ..........+++.|+|||.+.+ ...++.++|||||||++|
T Consensus 149 ~~~-------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~il~ 218 (311)
T cd07866 149 DNQ-------GILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG---ERRYTTAVDIWGIGCVFA 218 (311)
T ss_pred CCC-------CCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhC---CCccCchhHhHHHHHHHH
Confidence 887 7899999999976543221111000 00111223457889999998765 235788999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhh---hcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEA---LGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|++|++||.+.+.......+........+..+.. ......... ................+.+.+++.+||+.||.
T Consensus 219 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~ 297 (311)
T cd07866 219 EMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHS-FTNYPRTLEERFGKLGPEGLDLLSKLLSLDPY 297 (311)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhccccccccc-CCCCCccHHHHcccCChhHHHHHHHHcccCcc
Confidence 99999999987776655544422211111111110 000000000 00000000000112346789999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 001142 1119 ERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~ 1132 (1142)
+|||+.|++.|+|+
T Consensus 298 ~R~t~~ell~~~~f 311 (311)
T cd07866 298 KRLTASDALEHPYF 311 (311)
T ss_pred cCcCHHHHhcCCCC
Confidence 99999999999986
No 264
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.3e-33 Score=308.39 Aligned_cols=246 Identities=20% Similarity=0.356 Sum_probs=181.8
Q ss_pred eeecccCceEEEEEEECCc--------------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 813 DEAGKSVSSSLFRCKFGSA--------------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~~--------------~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
+.||+|+||.||+|.+... .+++|+. ... ... ....+..|+.+++.++||||++++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~--~~~--~~~----~~~~~~~~~~~l~~l~hp~iv~~~~~ 72 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVL--DPS--HRD----ISLAFFETASMMRQVSHKHIVLLYGV 72 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeec--Chh--hhh----HHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 4689999999999986321 2444442 211 111 22234788999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
+...... ++||||+++++|..++.. ....+++..+..++.||+.||+|||++||+||||||+
T Consensus 73 ~~~~~~~--------------~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~ 134 (262)
T cd05077 73 CVRDVEN--------------IMVEEFVEFGPLDLFMHR----KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTK 134 (262)
T ss_pred EecCCCC--------------EEEEecccCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcc
Confidence 8765433 899999999999988764 2246899999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||++.++........++++|||.+..... .....++..|+|||.+.. ...++.++|||||||
T Consensus 135 Nill~~~~~~~~~~~~~~l~d~g~~~~~~~--------------~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~ 197 (262)
T cd05077 135 NILLAREGIDGECGPFIKLSDPGIPITVLS--------------RQECVERIPWIAPECVED---SKNLSIAADKWSFGT 197 (262)
T ss_pred cEEEecCCccCCCCceeEeCCCCCCccccC--------------cccccccccccChhhhcC---CCCCCchhHHHHHHH
Confidence 999976532222234599999998864321 113457888999998763 246789999999999
Q ss_pred HHHHHH-hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELL-TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELL-tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
++|||+ +|..||......+.... ....... . ....+.+.+|+.+||+.||
T Consensus 198 ~l~el~~~~~~p~~~~~~~~~~~~-~~~~~~~-----------------------~-----~~~~~~~~~li~~cl~~dp 248 (262)
T cd05077 198 TLWEICYNGEIPLKDKTLAEKERF-YEGQCML-----------------------V-----TPSCKELADLMTHCMNYDP 248 (262)
T ss_pred HHHHHHhCCCCCCCCcchhHHHHH-HhcCccC-----------------------C-----CCChHHHHHHHHHHcCCCh
Confidence 999998 58888876443332211 1111000 0 0234568999999999999
Q ss_pred CCCCCHHHHHHHH
Q 001142 1118 TERPTAGDLYEMF 1130 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L 1130 (1142)
.+||++.+|++++
T Consensus 249 ~~Rp~~~~il~~~ 261 (262)
T cd05077 249 NQRPFFRAIMRDI 261 (262)
T ss_pred hhCcCHHHHHHhc
Confidence 9999999999875
No 265
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=3.9e-33 Score=316.25 Aligned_cols=294 Identities=21% Similarity=0.236 Sum_probs=200.5
Q ss_pred CcceeeeecccCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.|++.+.||+|+||.||+|.+ .+..+|+|+....... ...+...+.+|+.++++++||||+++++++.+..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ-----YTGISQSACREIALLRELKHENVVSLVEVFLEHA 75 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc-----ccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC
Confidence 478999999999999999998 3577888886543210 0111122368999999999999999999987642
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. ...++||||++ ++|.+++..........+++..+..++.||+.||.|||+++|+||||||+||+++
T Consensus 76 ~------------~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~ 142 (316)
T cd07842 76 D------------KSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVM 142 (316)
T ss_pred C------------ceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEc
Confidence 1 24699999997 6788887654443334789999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.++ ...+.+||+|||++......... ........+++.|+|||++.+ ...++.++|||||||++++|
T Consensus 143 ~~~---~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~~l~~l 209 (316)
T cd07842 143 GEG---PERGVVKIGDLGLARLFNAPLKP-------LADLDPVVVTIWYRAPELLLG---ARHYTKAIDIWAIGCIFAEL 209 (316)
T ss_pred CCC---CccceEEECCCccccccCCCccc-------ccccCCccccccccCHHHHhC---CCCCCcHHHHHHHHHHHHHH
Confidence 721 11288999999999765432110 111223467899999998765 23578899999999999999
Q ss_pred HhCCCCCCCCCHHH---------HHHHHHhCCCCCchhHHhhhcccccccc---cccCCCCCCch----hhh--hhHHHH
Q 001142 1044 LTLQVPYMGLSELE---------IHDLIQMGKRPRLTDELEALGSCHEHEV---AQSGSGFEKPE----AEL--ETLSFL 1105 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~e---------l~~~I~~~~~p~l~~~l~~~~~~~~~~~---~~~~~~~~~~~----~~~--~~~~~L 1105 (1142)
++|+.||.+..... ....+...................+... ......+.... .+. ..+..+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (316)
T cd07842 210 LTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQG 289 (316)
T ss_pred HhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHH
Confidence 99999997543221 1111111110111110000000000000 00000000000 011 345678
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001142 1106 VDVFRRCTEENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1106 ~dLI~~CL~~DP~~RPSa~EVL~~L~~ 1132 (1142)
.+++.+||+.||++|||+.|+++|+||
T Consensus 290 ~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 290 FDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 999999999999999999999999986
No 266
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.6e-33 Score=322.54 Aligned_cols=262 Identities=24% Similarity=0.369 Sum_probs=195.5
Q ss_pred CCCcceeeeecccCceEEEEEEE-------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~-------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g 877 (1142)
.++|++.++||+|+||.||+|.+ .+..+|+|+.+... .......+ .+|+.++.++ +||||+++++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~~----~~E~~~l~~l~~h~niv~~~~ 78 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRAL----MSELKILIHIGHHLNVVNLLG 78 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC---ChHHHHHH----HHHHHHHHhccCCccHhhhcc
Confidence 35799999999999999999975 24567888754221 22223333 7899999999 6899999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc------------------------------------
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------------------------ 921 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~------------------------------------ 921 (1142)
++...+. ..++||||+++|+|.+++......
T Consensus 79 ~~~~~~~-------------~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (343)
T cd05103 79 ACTKPGG-------------PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQ 145 (343)
T ss_pred eeecCCC-------------ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccccc
Confidence 8765331 348999999999999998752100
Q ss_pred --------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeE
Q 001142 922 --------------------------GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVV 975 (1142)
Q Consensus 922 --------------------------~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~v 975 (1142)
....+++..+..++.||+.||+|||++||+||||||+|||++.+ +.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~-------~~~ 218 (343)
T cd05103 146 SSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEN-------NVV 218 (343)
T ss_pred ccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCC-------CcE
Confidence 01247888899999999999999999999999999999999876 789
Q ss_pred EEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 001142 976 KLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLS 1054 (1142)
Q Consensus 976 KL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~ 1054 (1142)
||+|||++......... .......++..|+|||++.+ ..++.++||||||+++|+|++ |..||....
T Consensus 219 kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 286 (343)
T cd05103 219 KICDFGLARDIYKDPDY--------VRKGDARLPLKWMAPETIFD----RVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 286 (343)
T ss_pred EEEecccccccccCcch--------hhcCCCCCCcceECcHHhcC----CCCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence 99999998754321110 01112335678999999865 567899999999999999997 999997643
Q ss_pred HH-HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1055 EL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1055 ~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.. .....+..+..+..+. ..++.+.+++.+||+.||.+|||+.||++++...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 287 IDEEFCRRLKEGTRMRAPD---------------------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred ccHHHHHHHhccCCCCCCC---------------------------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 32 2223333222211110 2334689999999999999999999999998654
No 267
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=4.6e-33 Score=305.38 Aligned_cols=254 Identities=29% Similarity=0.435 Sum_probs=198.1
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCC-ChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGS-SADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+|+..+.||+|++|.||+|.. .+..+++|+........ .....+. +.+|+.++++++||||+++++++.+..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~----~~~e~~~l~~~~h~~i~~~~~~~~~~~- 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQ----LEQEIALLSKLQHPNIVQYLGTEREED- 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHH----HHHHHHHHHhcCCCCchheeeeEecCC-
Confidence 477889999999999999987 46778888764432211 1222233 478999999999999999999887654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+|+||+|+||+++.
T Consensus 76 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~ 137 (258)
T cd06632 76 -------------NLYIFLELVPGGSLAKLLKK-----YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT 137 (258)
T ss_pred -------------eEEEEEEecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence 34999999999999999976 235889999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||.+....... ......|+..|+|||.+... ..++.++|+||||+++|+|+
T Consensus 138 ~-------~~~kl~d~~~~~~~~~~~-----------~~~~~~~~~~y~~pe~~~~~---~~~~~~~D~~slG~~l~~l~ 196 (258)
T cd06632 138 N-------GVVKLADFGMAKQVVEFS-----------FAKSFKGSPYWMAPEVIAQQ---GGYGLAADIWSLGCTVLEMA 196 (258)
T ss_pred C-------CCEEEccCccceeccccc-----------cccccCCCcceeCHHHhcCC---CCCCchhhhHHHHHHHHHHH
Confidence 7 789999999987543321 11234588999999998651 23789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 TLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+|+.||......+....+.. ...+.. ....++.+.+++.+||+.+|.+||++
T Consensus 197 ~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~ 249 (258)
T cd06632 197 TGKPPWSQLEGVAAVFKIGRSKELPPI---------------------------PDHLSDEAKDFILKCLQRDPSLRPTA 249 (258)
T ss_pred hCCCCcccCcHHHHHHHHHhcccCCCc---------------------------CCCcCHHHHHHHHHHhhcCcccCcCH
Confidence 99999976554333322221 111111 01345678999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.+++.|+|+
T Consensus 250 ~~~l~~~~~ 258 (258)
T cd06632 250 AELLEHPFV 258 (258)
T ss_pred HHHhcCCCC
Confidence 999999874
No 268
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.4e-33 Score=320.47 Aligned_cols=290 Identities=19% Similarity=0.237 Sum_probs=203.1
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||.||+|.+ .+..+|+|+.. .... ..... .+.+|+.++++++||||+++++++.....
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~--~~~~-~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 77 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKIS--PFEH-QTFCQ----RTLREIKILRRFKHENIIGILDIIRPPSF 77 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEec--cccc-chhHH----HHHHHHHHHHhCCCCCcCchhheeecccc
Confidence 5799999999999999999987 45667777643 1111 11222 23689999999999999999998765432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. .....++||||++ ++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 78 ~---------~~~~~~lv~e~~~-~~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~ 141 (336)
T cd07849 78 E---------SFNDVYIVQELME-TDLYKLIKT------QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 141 (336)
T ss_pred c---------ccceEEEEehhcc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC
Confidence 1 1235699999997 688887753 46899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++......... ........||+.|+|||.+.+ ...++.++|||||||++|+|+
T Consensus 142 ~-------~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~DvwslGvil~el~ 204 (336)
T cd07849 142 N-------CDLKICDFGLARIADPEHDH-------TGFLTEYVATRWYRAPEIMLN---SKGYTKAIDIWSVGCILAEML 204 (336)
T ss_pred C-------CCEEECcccceeeccccccc-------cCCcCCcCcCCCccChHHhhC---CCCCCcHHHHHHHHHHHHHHH
Confidence 7 78999999998754332111 001123468999999998754 245789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||.+.+.......+...........+............. ..............+..+.+++.+||+.||++||
T Consensus 205 ~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp 284 (336)
T cd07849 205 SNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRI 284 (336)
T ss_pred hCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCc
Confidence 9999998765544333332211111111111110000000000 0000000001113466799999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001142 1122 TAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ss 1136 (1142)
|+.|+++|+|+..-.
T Consensus 285 t~~e~l~hp~~~~~~ 299 (336)
T cd07849 285 TVEEALAHPYLEQYH 299 (336)
T ss_pred CHHHHhcCccccccC
Confidence 999999999997553
No 269
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.9e-33 Score=315.41 Aligned_cols=269 Identities=22% Similarity=0.269 Sum_probs=202.0
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||++.+. +..+++|....... ...... ..+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~----~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL-ILRNQI----QQVFVERDILTFAENPFVVSMFCSFETKR- 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh-hhHHHH----HHHHHHHHHHHhCCCCCeeeeEEEEecCC-
Confidence 36899999999999999999985 45677776432210 011112 23478999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+.++||||++|++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 75 -------------~~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~ 136 (305)
T cd05609 75 -------------HLCMVMEYVEGGDCATLLKN-----IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITS 136 (305)
T ss_pred -------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECC
Confidence 34999999999999999976 246899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccc-----cCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-----HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-----~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
+ +.++|+|||.++............ ...........++..|+|||.+.. ..++.++|||||||+
T Consensus 137 ~-------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~v 205 (305)
T cd05609 137 M-------GHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR----QGYGKPVDWWAMGII 205 (305)
T ss_pred C-------CCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccC----CCCCchhhHHHHHHH
Confidence 7 789999999986421110000000 000001112357889999999865 467899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|||++|..||.+....++...+.....+... .....+..+.+++.+||+.||++
T Consensus 206 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~~P~~ 260 (305)
T cd05609 206 LYEFLVGCVPFFGDTPEELFGQVISDDIEWPE-------------------------GDEALPADAQDLISRLLRQNPLE 260 (305)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC-------------------------ccccCCHHHHHHHHHHhccChhh
Confidence 99999999999877666655554433211100 00134566899999999999999
Q ss_pred CCC---HHHHHHHHHhhcC
Q 001142 1120 RPT---AGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPS---a~EVL~~L~~~~s 1135 (1142)
||+ +.++++|+|+...
T Consensus 261 R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 261 RLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred ccCccCHHHHHhCccccCC
Confidence 998 7999999998654
No 270
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7.5e-33 Score=311.52 Aligned_cols=286 Identities=21% Similarity=0.254 Sum_probs=200.6
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+++|++.+.||+|++|+||+|.+. +..+++|...... ......+.+ .+|+.++++++||||+++++++.+..
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 74 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQ--EDEGVPSTA----IREISLLKEMQHGNIVRLQDVVHSEK 74 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcc--ccccchHHH----HHHHHHHHhccCCCEeeEEEEEecCC
Confidence 367999999999999999999974 5567887654322 111112223 68999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
+.++||||++ ++|.+++.. .....+++..+..++.||+.||+|||++||+|+||+|+||+++
T Consensus 75 --------------~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~ 136 (294)
T PLN00009 75 --------------RLYLVFEYLD-LDLKKHMDS---SPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID 136 (294)
T ss_pred --------------eEEEEEeccc-ccHHHHHHh---CCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE
Confidence 3599999996 688888754 2233468889999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.++ +.+||+|||++........ ......+++.|+|||++.+ ...++.++|||||||++|+|
T Consensus 137 ~~~------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~---~~~~~~~~Dv~slG~i~~~l 197 (294)
T PLN00009 137 RRT------NALKLADFGLARAFGIPVR----------TFTHEVVTLWYRAPEILLG---SRHYSTPVDIWSVGCIFAEM 197 (294)
T ss_pred CCC------CEEEEcccccccccCCCcc----------ccccCceeecccCHHHHhC---CCCCCcHHHHHHHHHHHHHH
Confidence 542 5799999999965432111 1112357889999999865 23578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhcccccccccccC-CCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSG-SGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+||+.||......+....+.. ...+ ....+............... ............++.+.+++.+||+.+|++||
T Consensus 198 ~tg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 276 (294)
T PLN00009 198 VNQKPLFPGDSEIDELFKIFRILGTP-NEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI 276 (294)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCC-ChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCc
Confidence 999999987655444333321 1111 11111000000000000000 00000001114566789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
++.++++|+|+...
T Consensus 277 s~~~~l~~~~~~~~ 290 (294)
T PLN00009 277 TARAALEHEYFKDL 290 (294)
T ss_pred CHHHHhcCchHhHH
Confidence 99999999999854
No 271
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-35 Score=326.01 Aligned_cols=347 Identities=22% Similarity=0.261 Sum_probs=252.0
Q ss_pred hhhhHHHHHHHhhhccCCCCcccccccccc-cCCCccceeEEeeCCchhhhhhhhcCCCCCCCCCCccchhhcccccccc
Q 001142 708 VCRHRAVLLKYLCDRVEPPVPCELVRGYLD-FQPHAWNTILVKKGDSWIRMIVDACRPHDIREEADPEYFIRYIPLYRTI 786 (1142)
Q Consensus 708 ~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 786 (1142)
.++-|.++-.+|....-..+||=-.++..- ++.|....+.-.--....+.+...++..++....+..||.++..|.+.
T Consensus 99 ~~~~~~i~~~~l~~~~~~~~~~~s~~~~v~~~~~~l~~~~~~~lf~~~~~~~~~~L~~~pF~~f~~S~yf~rFlQWK~l- 177 (591)
T KOG0986|consen 99 KDKARQILDAYLMKELLACLPQFSSKDLVTHVQEHLLEKPPKDLFQPLARAICAYLRGDPFQEFLESDYFTRFLQWKWL- 177 (591)
T ss_pred hhhHHHHHHHHhhccccccCCCcchhhhhHHHhhhccccCchhhhHHHHHHHHHHhccchHhHhHHHHHHHHHHHHHHH-
Confidence 356677777777766544444322111111 111111110000011234666777889999999999999999999886
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHH
Q 001142 787 APFSTESDHSPCSGLDPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRML 864 (1142)
Q Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL 864 (1142)
+..|.+.+.|+..++||+|+||.||-++. ++.-+|.|. +++..... +.-+...+.|-.||
T Consensus 178 -------------E~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKk--L~KKRiKk---r~ge~maLnEk~iL 239 (591)
T KOG0986|consen 178 -------------ELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKK--LDKKRIKK---RKGETMALNEKQIL 239 (591)
T ss_pred -------------HhhhccccceeeeEEEecccccceeEEEEecchhhHHHHH--HHHHHHHH---hhhhHHhhHHHHHH
Confidence 33677778899999999999999998875 455555554 22211111 11123347899999
Q ss_pred hhCCCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHH
Q 001142 865 GALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVE 944 (1142)
Q Consensus 865 ~~L~HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~y 944 (1142)
.+++.+.||.+--.|++.+.+ |+||..|.||+|.-+|.. .+...|++..++.++.+|+.||+|
T Consensus 240 ~kV~s~FiVslaYAfeTkd~L--------------ClVLtlMNGGDLkfHiyn---~g~~gF~e~ra~FYAAEi~cGLeh 302 (591)
T KOG0986|consen 240 EKVSSPFIVSLAYAFETKDAL--------------CLVLTLMNGGDLKFHIYN---HGNPGFDEQRARFYAAEIICGLEH 302 (591)
T ss_pred HHhccCcEEEEeeeecCCCce--------------EEEEEeecCCceeEEeec---cCCCCCchHHHHHHHHHHHhhHHH
Confidence 999999999998888877654 999999999999999876 344679999999999999999999
Q ss_pred HHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 945 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 945 LHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
||+.+||+|||||+|||+|+. |+|.|+|+|+|..+..... ....+||.+|||||++..
T Consensus 303 lH~~~iVYRDLKPeNILLDd~-------GhvRISDLGLAvei~~g~~-----------~~~rvGT~GYMAPEvl~n---- 360 (591)
T KOG0986|consen 303 LHRRRIVYRDLKPENILLDDH-------GHVRISDLGLAVEIPEGKP-----------IRGRVGTVGYMAPEVLQN---- 360 (591)
T ss_pred HHhcceeeccCChhheeeccC-------CCeEeeccceEEecCCCCc-----------cccccCcccccCHHHHcC----
Confidence 999999999999999999988 8999999999987765321 224489999999999987
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHH
Q 001142 1025 NLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1104 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1142)
..|+...|.||+||+||||+.|+.||.......-.+.+.+.... .. ..-....+++
T Consensus 361 e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~-------------------~~-----~ey~~kFS~e 416 (591)
T KOG0986|consen 361 EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE-------------------DP-----EEYSDKFSEE 416 (591)
T ss_pred CcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc-------------------ch-----hhcccccCHH
Confidence 55999999999999999999999999754332222222111000 00 0001256778
Q ss_pred HHHHHHHhcccCCCCCC-----CHHHHHHHHHhhcCC
Q 001142 1105 LVDVFRRCTEENPTERP-----TAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1105 L~dLI~~CL~~DP~~RP-----Sa~EVL~~L~~~~ss 1136 (1142)
+++|.+..|+.||.+|. .+++|-+|++|+.-.
T Consensus 417 akslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~ln 453 (591)
T KOG0986|consen 417 AKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDLN 453 (591)
T ss_pred HHHHHHHHHccCHHHhccCCCcCcchhhhCcccccCC
Confidence 99999999999999985 678999999998643
No 272
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.2e-33 Score=328.75 Aligned_cols=260 Identities=24% Similarity=0.330 Sum_probs=197.8
Q ss_pred CCCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g 877 (1142)
.++|.+.++||+|+||.||+|++.+ ..+|+|+.+.. . .....+. +.+|+.++.++. |||||++++
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~--~-~~~~~~~----~~~E~~~l~~l~~H~niv~~~~ 108 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKST--A-RSSEKQA----LMSELKIMSHLGPHLNIVNLLG 108 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCC--C-ChhHHHH----HHHHHHHHHhcCCCCCeEEEEE
Confidence 4568899999999999999999743 45788875422 1 1222223 378999999997 999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-------------------------------------
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE------------------------------------- 920 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~------------------------------------- 920 (1142)
++..... .++||||+++|+|.++++....
T Consensus 109 ~~~~~~~--------------~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (401)
T cd05107 109 ACTKGGP--------------IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSES 174 (401)
T ss_pred EEccCCC--------------cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhcc
Confidence 9876543 3999999999999999975321
Q ss_pred --------------------------------------------------------cCCCCCCHHHHHHHHHHHHHHHHH
Q 001142 921 --------------------------------------------------------TGEKHVSVKLALFIAQDVAAALVE 944 (1142)
Q Consensus 921 --------------------------------------------------------~~~~~ls~~~i~~Ia~qIa~gL~y 944 (1142)
.....+++..+..|+.||+.||+|
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~ 254 (401)
T cd05107 175 DGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEF 254 (401)
T ss_pred CccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHH
Confidence 011246788899999999999999
Q ss_pred HHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 945 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 945 LHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
||+++|+||||||+|||++.+ +.+||+|||+++........ .......++..|+|||.+.+
T Consensus 255 LH~~~ivHrdlkp~NiLl~~~-------~~~kL~DfGla~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~---- 315 (401)
T cd05107 255 LASKNCVHRDLAARNVLICEG-------KLVKICDFGLARDIMRDSNY--------ISKGSTFLPLKWMAPESIFN---- 315 (401)
T ss_pred HhcCCcCcccCCcceEEEeCC-------CEEEEEecCcceeccccccc--------ccCCCcCCCCceeChHHhcC----
Confidence 999999999999999999876 78999999999754321110 01122356788999999875
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhH
Q 001142 1025 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1102 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1142)
..++.++|||||||++|||++ |..||......+.. ..+..+..+..+ ...+
T Consensus 316 ~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p---------------------------~~~~ 368 (401)
T cd05107 316 NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKP---------------------------AHAS 368 (401)
T ss_pred CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCC---------------------------CCCC
Confidence 567899999999999999998 89999765444432 333332221111 1345
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001142 1103 SFLVDVFRRCTEENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1103 ~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~ 1132 (1142)
..+.+|+.+||..+|.+||++++|++.|..
T Consensus 369 ~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 369 DEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 679999999999999999999999998764
No 273
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.5e-33 Score=316.31 Aligned_cols=260 Identities=26% Similarity=0.438 Sum_probs=202.0
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||.||++.. .+..+++|...... ....+.+ .+|+.++++++||||+++++.+....
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~~----~~e~~~l~~l~hp~i~~~~~~~~~~~ 89 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ----QPKKELI----INEILVMRENKHPNIVNYLDSYLVGD 89 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc----chHHHHH----HHHHHHHhhcCCCCeeehhheeeeCC
Confidence 46899999999999999999986 45667888754321 1222333 78999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.+ ..+++..+..++.|++.||.|||++|++|+||||+||+++
T Consensus 90 --------------~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~ 149 (293)
T cd06647 90 --------------ELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 149 (293)
T ss_pred --------------cEEEEEecCCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc
Confidence 34999999999999999875 3578999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+........ ......|++.|+|||.+.. ..++.++||||||+++|++
T Consensus 150 ~~-------~~~kL~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Dv~slG~ll~~l 208 (293)
T cd06647 150 MD-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEM 208 (293)
T ss_pred CC-------CCEEEccCcceeccccccc----------ccccccCChhhcCchhhcc----CCCCchhhHHHHHHHHHHH
Confidence 77 7899999998865432211 1123458889999999865 4578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||...........+.....+... .....+..+.+++.+||..+|.+||++
T Consensus 209 l~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~ 263 (293)
T cd06647 209 VEGEPPYLNENPLRALYLIATNGTPELQ-------------------------NPEKLSAIFRDFLNRCLEMDVEKRGSA 263 (293)
T ss_pred HhCCCCCCCCChhhheeehhcCCCCCCC-------------------------CccccCHHHHHHHHHHccCChhhCcCH
Confidence 9999999865543322222111111100 001345568999999999999999999
Q ss_pred HHHHHHHHhhcCCCCC
Q 001142 1124 GDLYEMFVARTSSSIS 1139 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss~~s 1139 (1142)
.+++.|.|++..-..+
T Consensus 264 ~~il~h~~~~~~~~~~ 279 (293)
T cd06647 264 KELLQHPFLKIAKPLS 279 (293)
T ss_pred HHHhcCHHHhcCcccc
Confidence 9999999998665443
No 274
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.2e-32 Score=303.85 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=187.7
Q ss_pred eeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~-----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
+.||+|+||.||+|.+.. ..+|+|. .... ......+.+ .+|+.+++.++||||+++++++...+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~--~~~~-~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~~--- 70 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKS--LNRI-TDLEEVEQF----LKEGIIMKDFSHPNVLSLLGICLPSEG--- 70 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEe--cCcc-CCHHHHHHH----HHHHHHHccCCCCCcceEEEEeecCCC---
Confidence 468999999999998632 2455554 3221 122223333 789999999999999999997654221
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
..++||||+++++|.+++... ....++..+..++.||+.||.|||+.+|+||||||+|||++.+
T Consensus 71 ----------~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~-- 134 (262)
T cd05058 71 ----------SPLVVLPYMKHGDLRNFIRSE----THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES-- 134 (262)
T ss_pred ----------CcEEEEecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC--
Confidence 238999999999999999752 2346778889999999999999999999999999999999877
Q ss_pred cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-C
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-L 1046 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G 1046 (1142)
+.+||+|||+++......... ........++..|+|||.+.. ..++.++|||||||++|||++ |
T Consensus 135 -----~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~el~~~~ 199 (262)
T cd05058 135 -----FTVKVADFGLARDIYDKEYYS------VHNHTGAKLPVKWMALESLQT----QKFTTKSDVWSFGVLLWELMTRG 199 (262)
T ss_pred -----CcEEECCccccccccCCccee------ecccccCcCCccccChhHhcc----CccchHHHHHHHHHHHHHHHcCC
Confidence 789999999987543211100 001112346778999999865 467899999999999999999 5
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
.+||......+....+..+..+..+ ...++.+.+++.+||+.+|++||++.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~cl~~~p~~Rp~~~~i 252 (262)
T cd05058 200 APPYPDVDSFDITVYLLQGRRLLQP---------------------------EYCPDPLYEVMLSCWHPKPEMRPTFSEL 252 (262)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCC---------------------------CcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 6677766555555444333222111 0334568999999999999999999999
Q ss_pred HHHHHhh
Q 001142 1127 YEMFVAR 1133 (1142)
Q Consensus 1127 L~~L~~~ 1133 (1142)
++.+...
T Consensus 253 l~~l~~~ 259 (262)
T cd05058 253 VSRIEQI 259 (262)
T ss_pred HHHHHHH
Confidence 9987654
No 275
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.1e-33 Score=343.28 Aligned_cols=292 Identities=18% Similarity=0.205 Sum_probs=192.0
Q ss_pred CCCcceeeeecccCceEEEEEEECCc---cEEEEEEeccc---------CCCChHHHHHhHHhHHHHHHHHhhCCCCCcc
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSA---DAAAKVRTLKV---------CGSSADEIRNFEYSCLGEVRMLGALRHSCIV 873 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~---~vAvKi~~l~~---------~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIV 873 (1142)
..+|++.++||+|+||+||+|.+... ..+.|...... ..............+.+|+.++++++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 46799999999999999999876321 11111000000 0000000111223457999999999999999
Q ss_pred ceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001142 874 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHR 953 (1142)
Q Consensus 874 kl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHr 953 (1142)
++++++...+. .|+|||++. ++|..++...............+..|+.||+.||.|||++|||||
T Consensus 227 ~l~~~~~~~~~--------------~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHr 291 (501)
T PHA03210 227 KIEEILRSEAN--------------TYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHR 291 (501)
T ss_pred cEeEEEEECCe--------------eEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 99999987553 399999996 788887754221112234567788999999999999999999999
Q ss_pred CCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001142 954 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1033 (1142)
Q Consensus 954 DLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1033 (1142)
||||+|||++.+ +.+||+|||+++.+...... ......||+.|+|||++.+ ..++.++||
T Consensus 292 DLKP~NILl~~~-------~~vkL~DFGla~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di 351 (501)
T PHA03210 292 DIKLENIFLNCD-------GKIVLGDFGTAMPFEKEREA---------FDYGWVGTVATNSPEILAG----DGYCEITDI 351 (501)
T ss_pred CCCHHHEEECCC-------CCEEEEeCCCceecCccccc---------ccccccCCcCCCCchhhcC----CCCCcHHHH
Confidence 999999999887 78999999999765432111 1123469999999999876 568899999
Q ss_pred HHHHHHHHHHHhCCCC-CCCC--CH-HHHHHHHHhCCC-----CCchhH-HhhhcccccccccccCCCCCCchhhhhhHH
Q 001142 1034 WSYGCLLLELLTLQVP-YMGL--SE-LEIHDLIQMGKR-----PRLTDE-LEALGSCHEHEVAQSGSGFEKPEAELETLS 1103 (1142)
Q Consensus 1034 wSLGviL~ELLtG~~P-f~~~--~~-~el~~~I~~~~~-----p~l~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1142)
|||||++|||++|..+ |... .. .++.+.+..... +..... +.... ..............-.....+.
T Consensus 352 wSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~---~~~~~~~~~~~~~~~~~~~~~~ 428 (501)
T PHA03210 352 WSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYID---SAEIDHAGHSVPPLIRNLGLPA 428 (501)
T ss_pred HHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhh---hhhcccCccchhhHHHhcCCCh
Confidence 9999999999998754 4322 12 223333322111 110000 00000 0000000000000001113456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1104 FLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1104 ~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
.+.+++.+||+.||.+|||+.|++.|+||...
T Consensus 429 ~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~ 460 (501)
T PHA03210 429 DFEYPLVKMLTFDWHLRPGAAELLALPLFSAE 460 (501)
T ss_pred HHHHHHHHHhccCcccCcCHHHHhhChhhhcC
Confidence 68889999999999999999999999999754
No 276
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=4.8e-33 Score=313.74 Aligned_cols=267 Identities=21% Similarity=0.297 Sum_probs=195.1
Q ss_pred CCCCcceeeeecccCceEEEEEEECC--------------c--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGS--------------A--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR 868 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~--------------~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~ 868 (1142)
...+|++.++||+|+||.||+|.+.+ . .+|+|+.. .. ........+ .+|++++++++
T Consensus 3 ~~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~~----~~ei~~l~~l~ 75 (295)
T cd05097 3 PRQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLR--AD-VTKTARNDF----LKEIKIMSRLK 75 (295)
T ss_pred chHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecC--CC-CCHHHHHHH----HHHHHHHHhCC
Confidence 34589999999999999999987632 2 25565533 21 122223334 78999999999
Q ss_pred CCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-------CCCCCCHHHHHHHHHHHHHH
Q 001142 869 HSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-------GEKHVSVKLALFIAQDVAAA 941 (1142)
Q Consensus 869 HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-------~~~~ls~~~i~~Ia~qIa~g 941 (1142)
||||+++++++..... .++||||+++++|.+++...... ....+++..+..++.|++.|
T Consensus 76 h~~i~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~a 141 (295)
T cd05097 76 NPNIIRLLGVCVSDDP--------------LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASG 141 (295)
T ss_pred CCCcCeEEEEEcCCCc--------------cEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHH
Confidence 9999999999876543 49999999999999998652110 11246888999999999999
Q ss_pred HHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccc
Q 001142 942 LVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAM 1021 (1142)
Q Consensus 942 L~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 1021 (1142)
|+|||++|++||||||+||+++.+ +.+||+|||++......... .......++..|+|||++..
T Consensus 142 l~~lH~~~i~H~dlkp~Nill~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~- 205 (295)
T cd05097 142 MKYLASLNFVHRDLATRNCLVGNH-------YTIKIADFGMSRNLYSGDYY--------RIQGRAVLPIRWMAWESILL- 205 (295)
T ss_pred HHHHHhcCeeccccChhhEEEcCC-------CcEEecccccccccccCcce--------eccCcCcCceeecChhhhcc-
Confidence 999999999999999999999876 78999999998754321110 01122345778999999875
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhh
Q 001142 1022 HKPNLYGLEVDIWSYGCLLLELLT--LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAEL 1099 (1142)
Q Consensus 1022 ~~~~~~s~ksDVwSLGviL~ELLt--G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1142)
..++.++|||||||++|+|++ +..||......+....+......... .. ......
T Consensus 206 ---~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------~~-----~~~~~~ 262 (295)
T cd05097 206 ---GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGR---------------QI-----YLSQTP 262 (295)
T ss_pred ---CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccc---------------cc-----cCCCCC
Confidence 457899999999999999988 67888766655544333211000000 00 000001
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 001142 1100 ETLSFLVDVFRRCTEENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1100 ~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~ 1131 (1142)
..++.+.+|+.+||+.||++|||+++|++.+.
T Consensus 263 ~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 263 LCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 34567999999999999999999999998764
No 277
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7.1e-33 Score=314.16 Aligned_cols=259 Identities=24% Similarity=0.374 Sum_probs=196.5
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 875 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 875 (1142)
...++|.+.+.||+|+||.||+|.+. ...+|+|+.+ ... .....+.+ .+|+.+++++ +||||+++
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~--~~~-~~~~~~~~----~~E~~~l~~l~~h~~iv~~ 104 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLK--PTA-HSSEREAL----MSELKIMSHLGNHENIVNL 104 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecC--ccC-ChHHHHHH----HHHHHHHHhccCCCCcceE
Confidence 44567999999999999999999752 2246666533 211 12222333 7899999999 79999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 955 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDL 955 (1142)
++++...+. .++||||+++++|.++++. .....+++..+..++.||+.||+|||+++|+|+||
T Consensus 105 ~~~~~~~~~--------------~~lv~e~~~~~~L~~~i~~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dl 167 (302)
T cd05055 105 LGACTIGGP--------------ILVITEYCCYGDLLNFLRR---KRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDL 167 (302)
T ss_pred EEEEecCCc--------------eEEEEEcCCCCcHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhh
Confidence 999876543 4999999999999999975 22234899999999999999999999999999999
Q ss_pred CCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001142 956 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1035 (1142)
Q Consensus 956 Kp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwS 1035 (1142)
||+|||++.+ +.++|+|||.+......... .......++..|+|||.+.+ ..++.++||||
T Consensus 168 kp~Nil~~~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Diws 228 (302)
T cd05055 168 AARNVLLTHG-------KIVKICDFGLARDIMNDSNY--------VVKGNARLPVKWMAPESIFN----CVYTFESDVWS 228 (302)
T ss_pred ccceEEEcCC-------CeEEECCCcccccccCCCce--------eecCCCCcccccCCHhhhcc----CCCCcHhHHHH
Confidence 9999999876 78999999999755332111 01112346788999999875 45789999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1036 YGCLLLELLT-LQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1036 LGviL~ELLt-G~~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
|||++|+|++ |..||......+.. ..+..+..+..+ ...++.+.+++.+||
T Consensus 229 lGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~cl 281 (302)
T cd05055 229 YGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQP---------------------------EHAPAEIYDIMKTCW 281 (302)
T ss_pred HHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHc
Confidence 9999999998 99999875544333 222222111100 023456999999999
Q ss_pred ccCCCCCCCHHHHHHHHHh
Q 001142 1114 EENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~ 1132 (1142)
..+|++|||+.|+++.+..
T Consensus 282 ~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 282 DADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCCchhCcCHHHHHHHHHh
Confidence 9999999999999998754
No 278
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=7.4e-33 Score=307.83 Aligned_cols=261 Identities=22% Similarity=0.332 Sum_probs=185.4
Q ss_pred eeecccCceEEEEEEE-CCccEEEEEEe-cccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF-GSADAAAKVRT-LKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 890 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~-~~~~vAvKi~~-l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~ 890 (1142)
+.||+|+||.||+|.+ ....++.++.+ ++. .......+. +.+|+.+++.++||||+++++.+.+...
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~----~~~e~~~~~~l~h~~iv~~~~~~~~~~~------ 69 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKA-NASSKEQNE----FLQQGDPYRILQHPNILQCLGQCVEAIP------ 69 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecC-CCChHHHHH----HHHHHHHHhccCCcchhheEEEecCCCc------
Confidence 4699999999999975 33333322222 222 112222333 3799999999999999999999876543
Q ss_pred CCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCC
Q 001142 891 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 970 (1142)
Q Consensus 891 ~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~ 970 (1142)
.++||||+++++|.++++.... ....+++..+..++.||+.||+|||+++|+||||||+|||++.+
T Consensus 70 --------~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~----- 135 (268)
T cd05086 70 --------YLLVFEYCELGDLKSYLSQEQW-HRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD----- 135 (268)
T ss_pred --------cEEEEecCCCCcHHHHHHhhhc-ccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC-----
Confidence 4999999999999999976321 12356777889999999999999999999999999999999877
Q ss_pred CCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc---CCCCCCchhhHHHHHHHHHHHHh-C
Q 001142 971 GKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLEVDIWSYGCLLLELLT-L 1046 (1142)
Q Consensus 971 ~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~~s~ksDVwSLGviL~ELLt-G 1046 (1142)
+.++|+|||.+........ ........++..|+|||++.... ....++.++|||||||++|||++ +
T Consensus 136 --~~~~l~Dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~ 205 (268)
T cd05086 136 --LTVKVGDYGIGPSRYKEDY--------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENA 205 (268)
T ss_pred --ccEEecccccccccCcchh--------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCC
Confidence 7899999998753221100 00112345788999999975321 12345789999999999999997 5
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
..||......+....+.......+.. +......++.+.+++..|| .+|++||++++|
T Consensus 206 ~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i 262 (268)
T cd05086 206 AQPYSHLSDREVLNHVIKDQQVKLFK----------------------PQLELPYSERWYEVLQFCW-LSPEKRATAEEV 262 (268)
T ss_pred CCCCCCCCHHHHHHHHHhhcccccCC----------------------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHH
Confidence 77887766655554443222111110 0001134566888999999 679999999999
Q ss_pred HHHHH
Q 001142 1127 YEMFV 1131 (1142)
Q Consensus 1127 L~~L~ 1131 (1142)
++.+.
T Consensus 263 ~~~l~ 267 (268)
T cd05086 263 HRLLT 267 (268)
T ss_pred HHHhc
Confidence 98763
No 279
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=3.9e-33 Score=311.67 Aligned_cols=282 Identities=25% Similarity=0.310 Sum_probs=199.0
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|++|.||+|.+. +..+++|+.+... .... ....+.+|++++++++|+||+++++++...+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~--~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 73 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE--DDED----VKKTALREVKVLRQLRHENIVNLKEAFRRKG- 73 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc--cccc----chhHHHHHHHHHHhcCCCCeeehhheEEECC-
Confidence 36899999999999999999984 5567777643322 1111 2233478999999999999999999987644
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||++++.+..+... ...+++..+..++.||+.||.|||++||+|+||+|+||+++.
T Consensus 74 -------------~~~iv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~ 135 (288)
T cd07833 74 -------------RLYLVFEYVERTLLELLEAS-----PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE 135 (288)
T ss_pred -------------EEEEEEecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC
Confidence 35999999997666655543 245899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||.+........ .......++..|+|||++.+. ..++.++||||||+++|+|+
T Consensus 136 ~-------~~~kl~d~g~~~~~~~~~~---------~~~~~~~~~~~~~~PE~~~~~---~~~~~~~Dv~slG~~l~~l~ 196 (288)
T cd07833 136 S-------GVLKLCDFGFARALRARPA---------SPLTDYVATRWYRAPELLVGD---TNYGKPVDVWAIGCIMAELL 196 (288)
T ss_pred C-------CCEEEEeeecccccCCCcc---------ccccCcccccCCcCCchhcCC---CCcCchhhHHHHHHHHHHHH
Confidence 7 7899999999876543221 011234578899999998761 26789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccc---cccccCCCCCCc-hhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEH---EVAQSGSGFEKP-EAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
+|+.||.+....+....+........+............ ............ ......+..+.+++.+||..+|++|
T Consensus 197 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 276 (288)
T cd07833 197 DGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKER 276 (288)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhc
Confidence 999999876554433333221111111100000000000 000000000000 0001236779999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001142 1121 PTAGDLYEMFVA 1132 (1142)
Q Consensus 1121 PSa~EVL~~L~~ 1132 (1142)
||++++++|+|+
T Consensus 277 ps~~~il~~~~f 288 (288)
T cd07833 277 LTCDELLQHPYF 288 (288)
T ss_pred ccHHHHhcCCCC
Confidence 999999999885
No 280
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.4e-33 Score=309.53 Aligned_cols=254 Identities=30% Similarity=0.424 Sum_probs=199.3
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|++|.||+|.+. +..+++|..... .. ....+. +.+|+.++++++||||+++++.+....
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~-~~~~~~----~~~e~~~l~~~~~~~i~~~~~~~~~~~- 72 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLE--IN-EAIQKQ----ILRELDILHKCNSPYIVGFYGAFYNNG- 72 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecc--cC-hHHHHH----HHHHHHHHHHCCCCchhhhheeeecCC-
Confidence 36888999999999999999985 566777765432 11 222233 378999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeeec
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILID 963 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++... ...+++..+..++.|++.||+|||+ .|++|+||||+||+++
T Consensus 73 -------------~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~ 135 (265)
T cd06605 73 -------------DISICMEYMDGGSLDKILKEV----QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN 135 (265)
T ss_pred -------------EEEEEEEecCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC
Confidence 459999999999999999762 1568999999999999999999999 9999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+........ ....++..|+|||.+.+ ..++.++||||||+++|+|
T Consensus 136 ~~-------~~~~l~d~g~~~~~~~~~~------------~~~~~~~~y~~PE~~~~----~~~~~~~Dv~slG~~l~~l 192 (265)
T cd06605 136 SR-------GQIKLCDFGVSGQLVNSLA------------KTFVGTSSYMAPERIQG----NDYSVKSDIWSLGLSLIEL 192 (265)
T ss_pred CC-------CCEEEeecccchhhHHHHh------------hcccCChhccCHHHHcC----CCCCchhhHHHHHHHHHHH
Confidence 87 7899999999865432110 11457889999999876 4678999999999999999
Q ss_pred HhCCCCCCCCC-----HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1044 LTLQVPYMGLS-----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1044 LtG~~Pf~~~~-----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
++|+.||.... ..+..+.+.....+..+. ...+..+.++|.+||..||+
T Consensus 193 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~~p~ 246 (265)
T cd06605 193 ATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPS--------------------------GKFSPDFQDFVNLCLIKDPR 246 (265)
T ss_pred HhCCCCCCccccccccHHHHHHHHhcCCCCCCCh--------------------------hhcCHHHHHHHHHHcCCCch
Confidence 99999996532 122222222222211110 02456799999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001142 1119 ERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ 1134 (1142)
+|||+.+++.|+|++.
T Consensus 247 ~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 247 ERPSYKELLEHPFIKK 262 (265)
T ss_pred hCcCHHHHhhCchhhc
Confidence 9999999999999964
No 281
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6e-33 Score=305.89 Aligned_cols=261 Identities=29% Similarity=0.473 Sum_probs=200.1
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|.+.+.||+|+||.||+|.. .+..+++|+...... .....+ .+..|+.++++++|+||+++++.+...+
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~----~~~~e~~~~~~l~~~~i~~~~~~~~~~~-- 72 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDN--DPKTIK----EIADEMKVLELLKHPNLVKYYGVEVHRE-- 72 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECccc--chHHHH----HHHHHHHHHHhCCCCChhheeeeEecCC--
Confidence 588999999999999999987 456788887654322 222333 3489999999999999999999876544
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.||+|+||+|+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~ 135 (264)
T cd06626 73 ------------KVYIFMEYCSGGTLEELLEH-----GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHN 135 (264)
T ss_pred ------------EEEEEEecCCCCcHHHHHhh-----cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 35999999999999999875 2357899999999999999999999999999999999999886
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||.+........... .......+++.|+|||++.+.. ...++.++||||||+++|+|++
T Consensus 136 -------~~~kl~d~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~PE~~~~~~-~~~~~~~~Dv~s~G~il~~l~~ 201 (264)
T cd06626 136 -------GVIKLGDFGCAVKLKNNTTTMG------EEVQSLAGTPAYMAPEVITGGK-GKGHGRAADIWSLGCVVLEMAT 201 (264)
T ss_pred -------CCEEEcccccccccCCCCCccc------ccccCCcCCcCccChhhccCCC-CCCCCcccchHHHHHHHHHHHh
Confidence 7899999999876543221110 0011245788999999987522 1237899999999999999999
Q ss_pred CCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 LQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 G~~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|+.||..... ......+.....+.++.. ...+..+.+++.+||+.+|.+|||+.
T Consensus 202 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~li~~~l~~~p~~R~~~~ 256 (264)
T cd06626 202 GKRPWSELDNEFQIMFHVGAGHKPPIPDS-------------------------LQLSPEGKDFLDRCLESDPKKRPTAS 256 (264)
T ss_pred CCCCccCCcchHHHHHHHhcCCCCCCCcc-------------------------cccCHHHHHHHHHHccCCcccCCCHH
Confidence 9999976432 222222222222221110 13356688999999999999999999
Q ss_pred HHHHHHHh
Q 001142 1125 DLYEMFVA 1132 (1142)
Q Consensus 1125 EVL~~L~~ 1132 (1142)
+++.|+|.
T Consensus 257 ~i~~~~~~ 264 (264)
T cd06626 257 ELLQHPFV 264 (264)
T ss_pred HHhcCCCC
Confidence 99999884
No 282
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=8.6e-33 Score=309.19 Aligned_cols=272 Identities=24% Similarity=0.372 Sum_probs=194.1
Q ss_pred CCcceeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
.+|++.+.||+|+||.||+|.+ .+..+++|..... .....+.+ .+|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~----~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~ 75 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS----TAEHLRDF----EREIEILKSLQHDNIVKYKGVCY 75 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC----CHHHHHHH----HHHHHHHHhCCCCCeeEEEEEEc
Confidence 3689999999999999999975 2456777764321 22333344 78999999999999999999875
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
..+. ...++||||+++++|.+++... ...+++..+..++.|++.||+|||++||+||||||+||
T Consensus 76 ~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~ni 139 (284)
T cd05081 76 SAGR------------RNLRLVMEYLPYGSLRDYLQKH----RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNI 139 (284)
T ss_pred cCCC------------CceEEEEEecCCCCHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhE
Confidence 4321 1359999999999999999751 23589999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+++.+ +.+||+|||++........... ......++..|+|||++.+ ..++.++|||||||++
T Consensus 140 li~~~-------~~~~l~dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l 201 (284)
T cd05081 140 LVESE-------NRVKIGDFGLTKVLPQDKEYYK-------VREPGESPIFWYAPESLTE----SKFSVASDVWSFGVVL 201 (284)
T ss_pred EECCC-------CeEEECCCcccccccCCCccee-------ecCCCCCceEeeCHHHhcc----CCcChHHHHHHHHHHH
Confidence 99877 7899999999976543211100 0111124456999999865 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|||++|..|+.... ......+..... +.....+... ....... ......+..+.+++.+||..+|++
T Consensus 202 ~el~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~ 269 (284)
T cd05081 202 YELFTYSDKSCSPP-AEFMRMMGNDKQGQMIVYHLIEL--------LKNNGRL---PAPPGCPAEIYAIMKECWNNDPSQ 269 (284)
T ss_pred HHHhhcCCcCCCcc-hhhhhhcccccccccchHHHHHH--------HhcCCcC---CCCCCCCHHHHHHHHHHccCChhh
Confidence 99999987765432 122222211111 1111111000 0000000 011245667999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001142 1120 RPTAGDLYEMFVA 1132 (1142)
Q Consensus 1120 RPSa~EVL~~L~~ 1132 (1142)
|||+.||++.+..
T Consensus 270 Rpt~~ei~~~l~~ 282 (284)
T cd05081 270 RPSFSELALQVEA 282 (284)
T ss_pred CCCHHHHHHHHHh
Confidence 9999999998764
No 283
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.2e-32 Score=307.64 Aligned_cols=257 Identities=23% Similarity=0.355 Sum_probs=198.4
Q ss_pred CCCCcceeeeecccCceEEEEEEECC--c----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGS--A----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~--~----~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
...+|++.+.||+|+||.||+|.+.. . .+++|+. +... .......+ .+|+.++++++||||++++++
T Consensus 5 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~--~~~~-~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~ 77 (279)
T cd05057 5 KETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVL--REET-SPKANKEI----LDEAYVMASVDHPHVVRLLGI 77 (279)
T ss_pred CHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEec--cCCC-CHHHHHHH----HHHHHHHHhCCCCCcceEEEE
Confidence 34678999999999999999998732 2 3555543 2221 12222333 789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
+.. . ..++||||+++++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+
T Consensus 78 ~~~-~--------------~~~~v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~ 138 (279)
T cd05057 78 CLS-S--------------QVQLITQLMPLGCLLDYVRN----HKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAAR 138 (279)
T ss_pred Eec-C--------------ceEEEEecCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcc
Confidence 875 2 34999999999999999875 1235899999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
||+++.+ +.+||+|||.++......... ......++..|+|||.+.. ..++.++||||||+
T Consensus 139 nil~~~~-------~~~kL~dfg~~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~ 199 (279)
T cd05057 139 NVLVKTP-------QHVKITDFGLAKLLDVDEKEY--------HAEGGKVPIKWMALESILH----RIYTHKSDVWSYGV 199 (279)
T ss_pred eEEEcCC-------CeEEECCCcccccccCcccce--------ecCCCcccccccCHHHhhc----CCcCchhhHHHHHH
Confidence 9999876 789999999997654322110 0111224568999998864 56789999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
++||+++ |+.||.+....++...+..+.....+. ..+..+.+++.+||..||
T Consensus 200 ~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~l~~~p 252 (279)
T cd05057 200 TVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPP---------------------------ICTIDVYMVLVKCWMIDA 252 (279)
T ss_pred HHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCh
Confidence 9999998 999998877766666655433221110 233458899999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001142 1118 TERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~ 1133 (1142)
.+||++.++++.+...
T Consensus 253 ~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 253 ESRPTFKELINEFSKM 268 (279)
T ss_pred hhCCCHHHHHHHHHHH
Confidence 9999999999877653
No 284
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=8e-33 Score=304.55 Aligned_cols=255 Identities=27% Similarity=0.450 Sum_probs=202.7
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|++|.||+|++. +..+++|+..... .. .....+ .+|+.++.+++||||+++++++....
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~--~~-~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~- 72 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG--DE-EFRKQL----LRELKTLRSCESPYVVKCYGAFYKEG- 72 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc--ch-HHHHHH----HHHHHHHHhcCCCCeeeEEEEEccCC-
Confidence 36889999999999999999984 6677777754332 11 223333 79999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeeec
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILID 963 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||+|||+ .|++||||+|+||+++
T Consensus 73 -------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~ 134 (264)
T cd06623 73 -------------EISIVLEYMDGGSLADLLKK-----VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN 134 (264)
T ss_pred -------------eEEEEEEecCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC
Confidence 45999999999999999976 2568999999999999999999999 9999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+......... .....++..|+|||.+.. ..++.++||||||+++|+|
T Consensus 135 ~~-------~~~~l~df~~~~~~~~~~~~----------~~~~~~~~~y~~pE~~~~----~~~~~~~Dv~slG~il~~l 193 (264)
T cd06623 135 SK-------GEVKIADFGISKVLENTLDQ----------CNTFVGTVTYMSPERIQG----ESYSYAADIWSLGLTLLEC 193 (264)
T ss_pred CC-------CCEEEccCccceecccCCCc----------ccceeecccccCHhhhCC----CCCCchhhHHHHHHHHHHH
Confidence 87 78999999998765432111 113357889999999865 4678999999999999999
Q ss_pred HhCCCCCCCCC---HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhh-hHHHHHHHHHHhcccCCCC
Q 001142 1044 LTLQVPYMGLS---ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE-TLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1044 LtG~~Pf~~~~---~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~dLI~~CL~~DP~~ 1119 (1142)
++|+.||.... ..+....+.....+... .. .+..+.+++.+||..+|++
T Consensus 194 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~~p~~ 246 (264)
T cd06623 194 ALGKFPFLPPGQPSFFELMQAICDGPPPSLP---------------------------AEEFSPEFRDFISACLQKDPKK 246 (264)
T ss_pred HhCCCCCccccccCHHHHHHHHhcCCCCCCC---------------------------cccCCHHHHHHHHHHccCChhh
Confidence 99999997653 33333333322211111 02 5567999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001142 1120 RPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~s 1135 (1142)
||++.++++|+|++.-
T Consensus 247 R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 247 RPSAAELLQHPFIKKA 262 (264)
T ss_pred CCCHHHHHhCHHHHhc
Confidence 9999999999998753
No 285
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=3.9e-33 Score=315.55 Aligned_cols=254 Identities=28% Similarity=0.463 Sum_probs=199.2
Q ss_pred cceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|.....||+|+||.||+|.. .+..+++|+...... ...+. +.+|+.+++.+.||||+++++++...+
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~----~~~~~----~~~e~~~l~~l~hp~i~~~~~~~~~~~--- 91 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ----QRREL----LFNEVVIMRDYQHQNVVEMYKSYLVGE--- 91 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc----chHHH----HHHHHHHHHhCCCCchhhhhhheeeCC---
Confidence 45566899999999999987 467788887643321 11222 368999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..++||||+++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus 92 -----------~~~iv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~- 153 (297)
T cd06659 92 -----------ELWVLMEFLQGGALTDIVSQ------TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD- 153 (297)
T ss_pred -----------eEEEEEecCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC-
Confidence 34999999999999998754 358999999999999999999999999999999999999887
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++|+|||++........ ......|+..|+|||++.+ ..++.++|||||||++|||++|
T Consensus 154 ------~~~kL~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~~g 213 (297)
T cd06659 154 ------GRVKLSDFGFCAQISKDVP----------KRKSLVGTPYWMAPEVISR----TPYGTEVDIWSLGIMVIEMVDG 213 (297)
T ss_pred ------CcEEEeechhHhhcccccc----------cccceecCccccCHHHHcc----CCCCchhhHHHHHHHHHHHHhC
Confidence 7899999999865432111 1123468899999999875 4578999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
+.||......+....+.....+... .....+..+.+++.+||+.+|.+||++.++
T Consensus 214 ~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~~i~~~l~~~P~~Rps~~~l 268 (297)
T cd06659 214 EPPYFSDSPVQAMKRLRDSPPPKLK-------------------------NAHKISPVLRDFLERMLTREPQERATAQEL 268 (297)
T ss_pred CCCCCCCCHHHHHHHHhccCCCCcc-------------------------ccCCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 9999876655544443322111100 001344568999999999999999999999
Q ss_pred HHHHHhhcCC
Q 001142 1127 YEMFVARTSS 1136 (1142)
Q Consensus 1127 L~~L~~~~ss 1136 (1142)
++|+|+....
T Consensus 269 l~~~~~~~~~ 278 (297)
T cd06659 269 LDHPFLLQTG 278 (297)
T ss_pred hhChhhccCC
Confidence 9999987653
No 286
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=8e-33 Score=302.37 Aligned_cols=256 Identities=29% Similarity=0.430 Sum_probs=204.3
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||.|+||.||++.+. +..+++|+.... .......+.+ .+|++++++++|||++++++.+....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~----~~e~~~l~~l~~~~~~~~~~~~~~~~-- 72 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLS--NMSEKEREDA----LNEVKILKKLNHPNIIKYYESFEEKG-- 72 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecc--cCChHHHHHH----HHHHHHHHhcCCCChhheEEEEecCC--
Confidence 5889999999999999999985 667777775433 2222333333 78999999999999999999987643
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++..... ....+++..+..++.|++.||.|||++|++|+||+|+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~ 139 (258)
T cd08215 73 ------------KLCIVMEYADGGDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSN 139 (258)
T ss_pred ------------EEEEEEEecCCCcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCC
Confidence 45999999999999999986322 23579999999999999999999999999999999999999876
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+....... .......|++.|+|||.+.+ ..++.++||||+|+++++|++
T Consensus 140 -------~~~~l~d~~~~~~~~~~~----------~~~~~~~~~~~y~~pe~~~~----~~~~~~~Dv~slG~~~~~l~~ 198 (258)
T cd08215 140 -------GLVKLGDFGISKVLSSTV----------DLAKTVVGTPYYLSPELCQN----KPYNYKSDIWSLGCVLYELCT 198 (258)
T ss_pred -------CcEEECCccceeecccCc----------ceecceeeeecccChhHhcc----CCCCccccHHHHHHHHHHHHc
Confidence 789999999997654321 01123458889999999765 457889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||......+....+.....+.++. ..+..+.+++.+||..+|++|||+.+
T Consensus 199 g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~i~~~l~~~p~~Rp~~~~ 251 (258)
T cd08215 199 LKHPFEGENLLELALKILKGQYPPIPS---------------------------QYSSELRNLVSSLLQKDPEERPSIAQ 251 (258)
T ss_pred CCCCCCCCcHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 999998766655555543333222111 34456899999999999999999999
Q ss_pred HHHHHHh
Q 001142 1126 LYEMFVA 1132 (1142)
Q Consensus 1126 VL~~L~~ 1132 (1142)
+++|+|+
T Consensus 252 ll~~~~~ 258 (258)
T cd08215 252 ILQSPFI 258 (258)
T ss_pred HhcCCCC
Confidence 9999885
No 287
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=7.6e-33 Score=309.02 Aligned_cols=252 Identities=29% Similarity=0.419 Sum_probs=199.5
Q ss_pred cceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|++.++||+|+||.||+|.+ .+..+|+|+..... .....+.+ .+|+.++++++||||+++++++....
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~--- 75 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE---AEDEIEDI----QQEITVLSQCDSPYVTKYYGSYLKDT--- 75 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc---chHHHHHH----HHHHHHHHhcCCCCEeEEEEEEEeCC---
Confidence 67889999999999999987 45667887653221 11222333 78999999999999999999998655
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..++||||+++++|.+++.. ..+++..+..++.|++.|+.|||++|++|+||||+||+++.+
T Consensus 76 -----------~~~lv~e~~~~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~- 137 (277)
T cd06641 76 -----------KLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH- 137 (277)
T ss_pred -----------eEEEEEEeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCC-
Confidence 34999999999999999864 358999999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++|+|||++..+..... ......++..|+|||.+.+ ..++.++|||||||++|+|++|
T Consensus 138 ------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Dv~slG~~l~~l~~g 197 (277)
T cd06641 138 ------GEVKLADFGVAGQLTDTQI----------KRNTFVGTPFWMAPEVIKQ----SAYDSKADIWSLGITAIELAKG 197 (277)
T ss_pred ------CCEEEeecccceecccchh----------hhccccCCccccChhhhcc----CCCCchhhHHHHHHHHHHHHcC
Confidence 7899999999865433111 1112357889999999865 4567899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
..||...........+.....+.+. ...+..+.+++.+||+.+|.+||++.++
T Consensus 198 ~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~ 250 (277)
T cd06641 198 EPPHSELHPMKVLFLIPKNNPPTLE---------------------------GNYSKPLKEFVEACLNKEPSFRPTAKEL 250 (277)
T ss_pred CCCCCccchHHHHHHHhcCCCCCCC---------------------------cccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 9999876555444444332221111 1345668999999999999999999999
Q ss_pred HHHHHhhcC
Q 001142 1127 YEMFVARTS 1135 (1142)
Q Consensus 1127 L~~L~~~~s 1135 (1142)
++|+|+...
T Consensus 251 l~~~~~~~~ 259 (277)
T cd06641 251 LKHKFIVRF 259 (277)
T ss_pred HhCHHHhhh
Confidence 999998753
No 288
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=1.1e-32 Score=307.17 Aligned_cols=278 Identities=23% Similarity=0.269 Sum_probs=196.1
Q ss_pred cceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~~ 885 (1142)
|++.++||+|+||.||+|.. .+..+|+|+.... ......... .+|+.++.++. ||||+++++++.+...
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~--~~~~~~~~~-----~~e~~~l~~l~~h~~i~~~~~~~~~~~~- 72 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKH--FKSLEQVNN-----LREIQALRRLSPHPNILRLIEVLFDRKT- 72 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhc--cCCchhhhH-----HHHHHHHhhcCCCCCccceEEEEecCCC-
Confidence 67899999999999999987 4566777764322 122222222 47999999985 9999999999876411
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
...++||||++ ++|.+.+... ...+++..+..++.||+.||+|||+.||+||||||+||+++.
T Consensus 73 -----------~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~- 135 (282)
T cd07831 73 -----------GRLALVFELMD-MNLYELIKGR----KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD- 135 (282)
T ss_pred -----------CcEEEEEecCC-ccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-
Confidence 14599999997 6888887651 246899999999999999999999999999999999999975
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||.+....... ......++..|+|||++.. ...++.++|||||||++|||++
T Consensus 136 -------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slGv~l~el~~ 194 (282)
T cd07831 136 -------DILKLADFGSCRGIYSKP-----------PYTEYISTRWYRAPECLLT---DGYYGPKMDIWAVGCVFFEILS 194 (282)
T ss_pred -------CCeEEEecccccccccCC-----------CcCCCCCCcccCChhHhhc---CCCCCcchhHHHHHHHHHHHHc
Confidence 479999999997543211 1112357889999998654 2456789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccc-cccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEV-AQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|+.||.+.+..+....+....................... ................+..+.+++.+||+.+|++||++.
T Consensus 195 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 274 (282)
T cd07831 195 LFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAK 274 (282)
T ss_pred CCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHH
Confidence 9999988776655544432211111100000000000000 000000000011124578899999999999999999999
Q ss_pred HHHHHHHh
Q 001142 1125 DLYEMFVA 1132 (1142)
Q Consensus 1125 EVL~~L~~ 1132 (1142)
++++|+|+
T Consensus 275 ~~l~~~~~ 282 (282)
T cd07831 275 QALRHPYF 282 (282)
T ss_pred HHhhCCCC
Confidence 99999985
No 289
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=6.9e-33 Score=306.90 Aligned_cols=257 Identities=26% Similarity=0.408 Sum_probs=192.7
Q ss_pred eeecccCceEEEEEEECC--------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 813 DEAGKSVSSSLFRCKFGS--------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~--------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+.||+|+||.||+|++.. ..+++|..... ........+ .+|+.+++.++||||+++++++.....
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~---~~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~ 73 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG---ATDQEKKEF----LKEAHLMSNFNHPNIVKLLGVCLLNEP 73 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcc---cchhhHHHH----HHHHHHHHhcCCCCeeeEeeeecCCCC
Confidence 469999999999998743 34666653211 111223333 789999999999999999999876543
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~--~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
.++||||+++++|.+++...... ....+++..+..++.||+.||.|||+.+++|+||||+||++
T Consensus 74 --------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~ 139 (269)
T cd05044 74 --------------QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLV 139 (269)
T ss_pred --------------eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEE
Confidence 49999999999999999763221 22357899999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+.. .....++|+|||++......... .......++..|+|||++.+ ..++.++|||||||++|+
T Consensus 140 ~~~~~--~~~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~e 205 (269)
T cd05044 140 SEKGY--DADRVVKIGDFGLARDIYKSDYY--------RKEGEGLLPVRWMAPESLLD----GKFTTQSDVWSFGVLMWE 205 (269)
T ss_pred ecCCC--CCCcceEECCccccccccccccc--------ccCcccCCCccccCHHHHcc----CCcccchhHHHHHHHHHH
Confidence 87620 11237999999998754322110 01112345778999999875 467899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++ |..||......+....+.....+..+ ...+..+.+++.+||..+|.+||
T Consensus 206 llt~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp 258 (269)
T cd05044 206 ILTLGQQPYPALNNQEVLQHVTAGGRLQKP---------------------------ENCPDKIYQLMTNCWAQDPSERP 258 (269)
T ss_pred HHHcCCCCCcccCHHHHHHHHhcCCccCCc---------------------------ccchHHHHHHHHHHcCCCcccCC
Confidence 998 99999876665555544332221111 13456789999999999999999
Q ss_pred CHHHHHHHHH
Q 001142 1122 TAGDLYEMFV 1131 (1142)
Q Consensus 1122 Sa~EVL~~L~ 1131 (1142)
++.++++.+.
T Consensus 259 ~~~~i~~~l~ 268 (269)
T cd05044 259 TFDRIQEILQ 268 (269)
T ss_pred CHHHHHHHHh
Confidence 9999998764
No 290
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=9.4e-33 Score=313.36 Aligned_cols=258 Identities=27% Similarity=0.406 Sum_probs=200.3
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..|.+.+.||+|+||.||+|.+ .+..+++|+..... .......+.+ .+|+.+++.++||||+++++++.+.+.
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~~----~~Ei~~l~~l~h~niv~~~~~~~~~~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSG-KQSNEKWQDI----IKEVRFLQQLRHPNTIEYKGCYLREHT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccc-cCcHHHHHHH----HHHHHHHHhCCCCCEEEEEEEEEeCCe
Confidence 3488999999999999999987 46678888753221 1122222333 789999999999999999999886543
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||++ |+|.+++... ...+++..+..++.||+.||.|||++||+||||+|+||+++.
T Consensus 90 --------------~~lv~e~~~-g~l~~~~~~~----~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~ 150 (307)
T cd06607 90 --------------AWLVMEYCL-GSASDILEVH----KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE 150 (307)
T ss_pred --------------EEEEHHhhC-CCHHHHHHHc----ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC
Confidence 499999997 7887777541 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||++...... ....+++.|+|||++.+.. ...++.++||||||+++|||+
T Consensus 151 ~-------~~~kL~dfg~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~-~~~~~~~sDv~s~G~il~el~ 208 (307)
T cd06607 151 P-------GTVKLADFGSASLVSPA--------------NSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELA 208 (307)
T ss_pred C-------CCEEEeecCcceecCCC--------------CCccCCccccCceeeeccC-CCCCCcccchHHHHHHHHHHH
Confidence 7 78999999988643221 1335788999999875321 245788999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|+.||.+.........+.....+... ....+..+.+++.+||..||++||++.
T Consensus 209 tg~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~ 262 (307)
T cd06607 209 ERKPPLFNMNAMSALYHIAQNDSPTLS--------------------------SNDWSDYFRNFVDSCLQKIPQDRPSSE 262 (307)
T ss_pred cCCCCCCCccHHHHHHHHhcCCCCCCC--------------------------chhhCHHHHHHHHHHhcCChhhCcCHH
Confidence 999999876655443333322222111 013456799999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 001142 1125 DLYEMFVARTSS 1136 (1142)
Q Consensus 1125 EVL~~L~~~~ss 1136 (1142)
+++.|+|+....
T Consensus 263 ~il~~~~~~~~~ 274 (307)
T cd06607 263 ELLKHRFVLRER 274 (307)
T ss_pred HHhcChhhcccC
Confidence 999999997643
No 291
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=9.7e-33 Score=306.14 Aligned_cols=252 Identities=27% Similarity=0.398 Sum_probs=188.5
Q ss_pred ceeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
.....||+|+||.||+|++.. ..+++|... .. .....+.+ .+|+.++++++|+||+++++++...+
T Consensus 11 ~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~--~~--~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~---- 78 (268)
T cd06624 11 GERVVLGKGTYGIVYAARDLSTQVRIAIKEIP--ER--DSRYVQPL----HEEIALHSYLKHRNIVQYLGSDSENG---- 78 (268)
T ss_pred CceEEEecCCceEEEEeEecCCCcEEEEEEec--CC--CHHHHHHH----HHHHHHHHhcCCCCeeeeeeeeccCC----
Confidence 444689999999999999754 446666533 21 22233344 78999999999999999999987654
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCC--CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHV--SVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~l--s~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++... ...+ ++..+..++.||+.||+|||++||+||||||+||+++.+
T Consensus 79 ----------~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~ 144 (268)
T cd06624 79 ----------FFKIFMEQVPGGSLSALLRSK----WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY 144 (268)
T ss_pred ----------EEEEEEecCCCCCHHHHHHHh----cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC
Confidence 349999999999999999752 1234 788899999999999999999999999999999999763
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
. +.++|+|||.+........ ......|++.|+|||++... ...++.++||||||+++|+|++
T Consensus 145 ~------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~~--~~~~~~~~Dv~slGvvl~~l~~ 206 (268)
T cd06624 145 S------GVVKISDFGTSKRLAGINP----------CTETFTGTLQYMAPEVIDKG--PRGYGAPADIWSLGCTIVEMAT 206 (268)
T ss_pred C------CeEEEecchhheecccCCC----------ccccCCCCccccChhhhccc--cccCCchhhhHHHHHHHHHHHh
Confidence 2 6799999999865432111 11123478899999998652 1347789999999999999999
Q ss_pred CCCCCCCCCHHHH-HHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1046 LQVPYMGLSELEI-HDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1046 G~~Pf~~~~~~el-~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
|..||........ .... .....+.+ +...++.+.+++.+||+.+|.+|||+
T Consensus 207 g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~l~~~p~~Rpt~ 259 (268)
T cd06624 207 GKPPFIELGEPQAAMFKVGMFKIHPEI---------------------------PESLSAEAKNFILRCFEPDPDKRASA 259 (268)
T ss_pred CCCCCccccChhhhHhhhhhhccCCCC---------------------------CcccCHHHHHHHHHHcCCCchhCCCH
Confidence 9999975332211 1111 00111110 11345678999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.|++.|+|+
T Consensus 260 ~~ll~~~~~ 268 (268)
T cd06624 260 HDLLQDPFL 268 (268)
T ss_pred HHHHhCCCC
Confidence 999999985
No 292
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=8.8e-33 Score=310.47 Aligned_cols=255 Identities=27% Similarity=0.431 Sum_probs=200.4
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|...+.||+|++|.||++.+ .+..+++|..... .....+. +.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~----~~~e~~~l~~~~h~~vv~~~~~~~~~~-- 89 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR----KQQRREL----LFNEVVIMRDYQHPNIVEMYSSYLVGD-- 89 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc----chhHHHH----HHHHHHHHHHcCCCChheEEEEEEcCC--
Confidence 355668999999999999987 3566777764322 1122223 378999999999999999999987644
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
+.++||||+++++|.+++.. ..+++..+..++.|++.||+|||++||+||||+|+||+++.+
T Consensus 90 ------------~~~~v~e~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~ 151 (285)
T cd06648 90 ------------ELWVVMEFLEGGALTDIVTH------TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSD 151 (285)
T ss_pred ------------eEEEEEeccCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCC
Confidence 34999999999999999875 358999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+....... .......|++.|+|||.+.+ ..++.++|||||||++|+|++
T Consensus 152 -------~~~~l~d~g~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slGv~l~ell~ 210 (285)
T cd06648 152 -------GRVKLSDFGFCAQVSKEV----------PRRKSLVGTPYWMAPEVISR----LPYGTEVDIWSLGIMVIEMVD 210 (285)
T ss_pred -------CcEEEcccccchhhccCC----------cccccccCCccccCHHHhcC----CCCCCcccHHHHHHHHHHHHh
Confidence 789999999886443211 11123458899999999865 457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||...+.......+.....+.... ....+..+.+++.+||+.+|.+||++.+
T Consensus 211 g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 265 (285)
T cd06648 211 GEPPYFNEPPLQAMKRIRDNLPPKLKN-------------------------LHKVSPRLRSFLDRMLVRDPAQRATAAE 265 (285)
T ss_pred CCCCCcCCCHHHHHHHHHhcCCCCCcc-------------------------cccCCHHHHHHHHHHcccChhhCcCHHH
Confidence 999998766655555544332211110 0024567999999999999999999999
Q ss_pred HHHHHHhhcCC
Q 001142 1126 LYEMFVARTSS 1136 (1142)
Q Consensus 1126 VL~~L~~~~ss 1136 (1142)
+++|+|+...-
T Consensus 266 il~~~~~~~~~ 276 (285)
T cd06648 266 LLNHPFLAKAG 276 (285)
T ss_pred HccCcccccCC
Confidence 99999997543
No 293
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=9.9e-33 Score=344.61 Aligned_cols=270 Identities=24% Similarity=0.300 Sum_probs=195.0
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+.+|++.++||+|+||.||+|.+. +..+|+|+..... ... .....++.+|++++++++||||+++++++.+.+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l--~~~---e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~ 75 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDL--SEN---PLLKKRFLREAKIAADLIHPGIVPVYSICSDGD 75 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECccc--ccC---HHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC
Confidence 468999999999999999999984 5677887754221 111 122334589999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccC------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG------EKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~------~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
..++||||++|++|.+++....... ...+++..+..++.||+.||+|||++||+||||||
T Consensus 76 --------------~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKP 141 (932)
T PRK13184 76 --------------PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKP 141 (932)
T ss_pred --------------EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCch
Confidence 3499999999999999997532211 23456778899999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCccccccccccc---c-----cccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTC---C-----IAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1029 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~---~-----~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1029 (1142)
+|||++.+ +.++|+|||+++......... . .............||+.|+|||++.+ ..++.
T Consensus 142 eNILLd~d-------g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g----~~~S~ 210 (932)
T PRK13184 142 DNILLGLF-------GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG----VPASE 210 (932)
T ss_pred heEEEcCC-------CCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC----CCCCc
Confidence 99999887 789999999997652111000 0 00001112234579999999999876 56789
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHH
Q 001142 1030 EVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF 1109 (1142)
Q Consensus 1030 ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI 1109 (1142)
++|||||||++|||+||+.||.............. ..+. .. ......++.+.+++
T Consensus 211 kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i-~~P~---~~---------------------~p~~~iP~~L~~LI 265 (932)
T PRK13184 211 STDIYALGVILYQMLTLSFPYRRKKGRKISYRDVI-LSPI---EV---------------------APYREIPPFLSQIA 265 (932)
T ss_pred HhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhc-cChh---hc---------------------cccccCCHHHHHHH
Confidence 99999999999999999999976443322211000 0000 00 00014556789999
Q ss_pred HHhcccCCCCCCCH-HHHHHHH
Q 001142 1110 RRCTEENPTERPTA-GDLYEMF 1130 (1142)
Q Consensus 1110 ~~CL~~DP~~RPSa-~EVL~~L 1130 (1142)
.+||+.||++||+. +++++.+
T Consensus 266 ~rcL~~DP~kR~ss~eeLl~~L 287 (932)
T PRK13184 266 MKALAVDPAERYSSVQELKQDL 287 (932)
T ss_pred HHHccCChhhCcCHHHHHHHHH
Confidence 99999999999755 4454443
No 294
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=3.2e-33 Score=313.30 Aligned_cols=266 Identities=24% Similarity=0.318 Sum_probs=196.7
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS 882 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~ 882 (1142)
.++|+..++||+|+||.||++.+. +..+|+|..... ... ..... +.+|+.++.++. ||||+++++++..+
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~--~~~-~~~~~----~~~e~~~l~~~~~~~~iv~~~~~~~~~ 75 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRST--VDE-KEQKR----LLMDLDVVMRSSDCPYIVKFYGALFRE 75 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhc--cCh-HHHHH----HHHHHHHHHHhcCCCCEeeeeeEEecC
Confidence 356788899999999999999984 566777764322 112 22223 378999999996 99999999988764
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENIL 961 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDLKp~NIL 961 (1142)
. ..+++|||+. ++|.++...........+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 76 ~--------------~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil 140 (288)
T cd06616 76 G--------------DCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNIL 140 (288)
T ss_pred C--------------cEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEE
Confidence 4 3489999996 6777665433223335799999999999999999999975 9999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.++|+|||++....... ......|++.|+|||++.... ...++.++|||||||++|
T Consensus 141 ~~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~ 201 (288)
T cd06616 141 LDRN-------GNIKLCDFGISGQLVDSI-----------AKTRDAGCRPYMAPERIDPSA-RDGYDVRSDVWSLGITLY 201 (288)
T ss_pred EccC-------CcEEEeecchhHHhccCC-----------ccccccCccCccCHHHhcccc-ccCCcchhhhhHHHHHHH
Confidence 9876 789999999986543211 111235788999999987521 136789999999999999
Q ss_pred HHHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1042 ELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
+|++|+.||..... .+....+.....+.+.. ......+..+.+|+.+||+.||++|
T Consensus 202 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~~p~~R 258 (288)
T cd06616 202 EVATGKFPYPKWNSVFDQLTQVVKGDPPILSN-----------------------SEEREFSPSFVNFINLCLIKDESKR 258 (288)
T ss_pred HHHhCCCCchhcchHHHHHhhhcCCCCCcCCC-----------------------cCCCccCHHHHHHHHHHccCChhhC
Confidence 99999999975431 11111111111111110 0001456679999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||+.+|++|+|++..
T Consensus 259 pt~~~i~~~~~~~~~ 273 (288)
T cd06616 259 PKYKELLEHPFIKDY 273 (288)
T ss_pred cCHHHHhcChhhhch
Confidence 999999999999754
No 295
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=8.8e-33 Score=308.53 Aligned_cols=279 Identities=18% Similarity=0.245 Sum_probs=201.7
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.++||+|++|.||+|++. +..+++|+....... ..... +.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~~- 72 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE---GTPST----AIREISLMKELKHENIVRLHDVIHTENK- 72 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc---cchHH----HHHHHHHHHhhcCCCEeeeeeeEeeCCc-
Confidence 5889999999999999999984 566788875543211 11122 3689999999999999999999987553
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.++||||++ ++|.+++.... ....+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 73 -------------~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~ 136 (284)
T cd07836 73 -------------LMLVFEYMD-KDLKKYMDTHG--VRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKR 136 (284)
T ss_pred -------------EEEEEecCC-ccHHHHHHhcC--CCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC
Confidence 499999998 58998886522 22468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+........ ......++..|+|||++.+ ...++.++|||||||++|+|++
T Consensus 137 -------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~---~~~~~~~~Dv~slG~~l~~l~~ 196 (284)
T cd07836 137 -------GELKLADFGLARAFGIPVN----------TFSNEVVTLWYRAPDVLLG---SRTYSTSIDIWSVGCIMAEMIT 196 (284)
T ss_pred -------CcEEEeecchhhhhcCCcc----------ccccccccccccChHHhcC---CCCCCcHHHHHHHHHHHHHHHh
Confidence 7899999999865432111 1112347889999999865 2356789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCC---chhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK---PEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|+.||.+.+..+....+...........+....... ........... .......+..+.+++.+||+.||.+||+
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~ 274 (284)
T cd07836 197 GRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLP--EYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRIS 274 (284)
T ss_pred CCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCc--hhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCC
Confidence 999998776655544442222111111111111000 00000000000 0011134567899999999999999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
+.++++|+|+
T Consensus 275 ~~~~l~~~~f 284 (284)
T cd07836 275 AHDALQHPWF 284 (284)
T ss_pred HHHHhcCCCC
Confidence 9999999986
No 296
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.5e-32 Score=302.19 Aligned_cols=249 Identities=25% Similarity=0.364 Sum_probs=191.9
Q ss_pred eeecccCceEEEEEEECC---c--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGS---A--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~---~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
++||+|++|.||+|.+.. . .+|+|+.... ... ...+. +.+|+.++++++||||+++++++.+ .
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~--~~~-~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~-~---- 68 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSD--KLS-DIMDD----FLKEAAIMHSLDHENLIRLYGVVLT-H---- 68 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCc--ccH-HHHHH----HHHHHHHHhhcCCCCccceeEEEcC-C----
Confidence 478999999999998732 2 3566654322 111 22333 4799999999999999999999875 3
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
..++||||+++++|.+++... ....+++..+..++.|++.||+|||++|++|+||||+||+++.+
T Consensus 69 ----------~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~-- 133 (257)
T cd05040 69 ----------PLMMVTELAPLGSLLDRLRKD---ALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASD-- 133 (257)
T ss_pred ----------eEEEEEEecCCCcHHHHHHhc---ccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecC--
Confidence 349999999999999999762 11468999999999999999999999999999999999999987
Q ss_pred cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-C
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-L 1046 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G 1046 (1142)
+.+||+|||++..+....... .......++..|+|||++.. ..++.++|||||||++|+|++ |
T Consensus 134 -----~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~~pE~~~~----~~~~~~~Di~slG~~l~el~t~g 197 (257)
T cd05040 134 -----DKVKIGDFGLMRALPQNEDHY-------VMEEHLKVPFAWCAPESLRT----RTFSHASDVWMFGVTLWEMFTYG 197 (257)
T ss_pred -----CEEEeccccccccccccccce-------ecccCCCCCceecCHHHhcc----cCcCchhhhHHHHHHHHHHHhCC
Confidence 789999999997654322110 01113347788999999875 567899999999999999998 9
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
..||...+..+....+..... ... . ....+..+.+++.+||+.+|++|||+.++
T Consensus 198 ~~p~~~~~~~~~~~~~~~~~~-~~~----------------------~---~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 251 (257)
T cd05040 198 EEPWAGLSGSQILKKIDKEGE-RLE----------------------R---PEACPQDIYNVMLQCWAHNPADRPTFAAL 251 (257)
T ss_pred CCCCCCCCHHHHHHHHHhcCC-cCC----------------------C---CccCCHHHHHHHHHHCCCCcccCCCHHHH
Confidence 999987766665555432110 000 0 01345679999999999999999999999
Q ss_pred HHHH
Q 001142 1127 YEMF 1130 (1142)
Q Consensus 1127 L~~L 1130 (1142)
++.+
T Consensus 252 ~~~l 255 (257)
T cd05040 252 REFL 255 (257)
T ss_pred HHHh
Confidence 9875
No 297
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=1.1e-32 Score=302.15 Aligned_cols=253 Identities=27% Similarity=0.401 Sum_probs=201.9
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.++||+|+||.||++.+. +..+++|..... .........+ .+|+.++++++||||+++++++.+..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLG--SMSQKEREDA----VNEIRILASVNHPNIISYKEAFLDGN-- 72 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehh--hccHHHHHHH----HHHHHHHHhCCCCCchhhhhhhccCC--
Confidence 4889999999999999999874 456777765432 2222333333 68999999999999999999887543
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
+.++||||+++++|.+++.+.. .....+++..+..++.|++.||.|||+.|++|+||+|+||+++.+
T Consensus 73 ------------~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~ 139 (256)
T cd08530 73 ------------KLCIVMEYAPFGDLSKAISKRK-KKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAN 139 (256)
T ss_pred ------------EEEEEehhcCCCCHHHHHHHHH-hhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecC
Confidence 4599999999999999987633 223568999999999999999999999999999999999999886
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||.+....... .....+++.|+|||.+.+ ..++.++|+||||+++|+|++
T Consensus 140 -------~~~kl~d~g~~~~~~~~~------------~~~~~~~~~~~~Pe~~~~----~~~~~~~D~~slG~~~~~l~~ 196 (256)
T cd08530 140 -------DLVKIGDLGISKVLKKNM------------AKTQIGTPHYMAPEVWKG----RPYSYKSDIWSLGCLLYEMAT 196 (256)
T ss_pred -------CcEEEeeccchhhhccCC------------cccccCCccccCHHHHCC----CCCCchhhHHHHHHHHHHHHh
Confidence 789999999997654321 112347889999999875 567889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||...+..+....+.....+..+. ..+.++.+++.+||+.+|++||++.+
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (256)
T cd08530 197 FAPPFEARSMQDLRYKVQRGKYPPIPP---------------------------IYSQDLQNFIRSMLQVKPKLRPNCDK 249 (256)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCch---------------------------hhCHHHHHHHHHHcCCCcccCCCHHH
Confidence 999998777665555544433322211 34566999999999999999999999
Q ss_pred HHHHHH
Q 001142 1126 LYEMFV 1131 (1142)
Q Consensus 1126 VL~~L~ 1131 (1142)
+++||+
T Consensus 250 ~l~~p~ 255 (256)
T cd08530 250 ILASPA 255 (256)
T ss_pred HhcCCC
Confidence 999875
No 298
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6e-33 Score=306.15 Aligned_cols=257 Identities=25% Similarity=0.354 Sum_probs=196.1
Q ss_pred CcceeeeecccCceEEEEEEECCc--cEEEEEEec-ccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTL-KVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~~--~vAvKi~~l-~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+|.+.++||+|+||.||++.+... .+++|+.+. ............ +..|+.++++++||||+++++++.+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~- 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQ----ANQEAQLLSKLDHPAIVKFHASFLERD- 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHH----HHHHHHHHHhCCCCcHHHHHHHHhcCC-
Confidence 488999999999999999988543 345555321 111111111222 257999999999999999999987544
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++...... ...+++..++.++.|++.||.|||++|++|+||||+||+++.
T Consensus 76 -------------~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~ 141 (260)
T cd08222 76 -------------AFCIITEYCEGRDLDCKLEELKHT-GKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN 141 (260)
T ss_pred -------------ceEEEEEeCCCCCHHHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec
Confidence 349999999999999998764322 356899999999999999999999999999999999999964
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+.++|+|||.+........ ......|++.|+|||.+.+ ..++.++||||||+++|+|+
T Consensus 142 --------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~~----~~~~~~~Dv~slG~~~~~l~ 199 (260)
T cd08222 142 --------NLLKIGDFGVSRLLMGSCD----------LATTFTGTPYYMSPEALKH----QGYDSKSDIWSLGCILYEMC 199 (260)
T ss_pred --------CCEeecccCceeecCCCcc----------cccCCCCCcCccCHHHHcc----CCCCchhhHHHHHHHHHHHH
Confidence 4599999999865432111 1123457889999999865 45678999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|..||...........+..+..+..+ ...+.++.+++.+||+.+|++||++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 252 (260)
T cd08222 200 CLAHAFEGQNFLSVVLRIVEGPTPSLP---------------------------ETYSRQLNSIMQSMLNKDPSLRPSAA 252 (260)
T ss_pred hCCCCCCCccHHHHHHHHHcCCCCCCc---------------------------chhcHHHHHHHHHHhcCChhhCcCHH
Confidence 999999765554444444333222211 14456789999999999999999999
Q ss_pred HHHHHHHh
Q 001142 1125 DLYEMFVA 1132 (1142)
Q Consensus 1125 EVL~~L~~ 1132 (1142)
++++|+|+
T Consensus 253 ~il~~~~~ 260 (260)
T cd08222 253 EILRNPFI 260 (260)
T ss_pred HHhhCCCC
Confidence 99999985
No 299
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.2e-32 Score=306.38 Aligned_cols=258 Identities=22% Similarity=0.348 Sum_probs=195.7
Q ss_pred CCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
.+|++.+.||+|+||.||+|++. ...+++|... .. ......+.+ .+|++++++++||||+++++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~--~~-~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~ 77 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQ--KT-KDENLQSEF----RRELDMFRKLSHKNVVRLLGLC 77 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccC--Cc-cchHHHHHH----HHHHHHHHhcCCcceeeeEEEE
Confidence 46889999999999999999963 2346666532 11 111123334 7899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccC----CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG----EKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 955 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~----~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDL 955 (1142)
.+... .++||||+++++|.+++....... ...+++..+..++.||+.||+|||+++|+||||
T Consensus 78 ~~~~~--------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl 143 (275)
T cd05046 78 REAEP--------------HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDL 143 (275)
T ss_pred CCCCc--------------ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcC
Confidence 76543 399999999999999997632110 125899999999999999999999999999999
Q ss_pred CCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001142 956 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1035 (1142)
Q Consensus 956 Kp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwS 1035 (1142)
||+||+++.+ +.++++|||++........ .......+++.|+|||.+.+ ..++.++||||
T Consensus 144 kp~Nili~~~-------~~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~s 203 (275)
T cd05046 144 AARNCLVSSQ-------REVKVSLLSLSKDVYNSEY---------YKLRNALIPLRWLAPEAVQE----DDFSTKSDVWS 203 (275)
T ss_pred ccceEEEeCC-------CcEEEcccccccccCcccc---------cccCCceeEEeecChhhhcc----CCCCchhhHHH
Confidence 9999999887 7899999999864322110 01122346778999998865 45678999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001142 1036 YGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1114 (1142)
Q Consensus 1036 LGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~ 1114 (1142)
||+++|+|++ |..||...........+..+.... . . ....+..+.+++.+||+
T Consensus 204 lG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~-~----------------------~---~~~~~~~l~~~i~~~l~ 257 (275)
T cd05046 204 FGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL-P----------------------V---PEGCPSRLYKLMTRCWA 257 (275)
T ss_pred HHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC-C----------------------C---CCCCCHHHHHHHHHHcC
Confidence 9999999998 888997665555444443222110 0 0 01345679999999999
Q ss_pred cCCCCCCCHHHHHHHHH
Q 001142 1115 ENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1115 ~DP~~RPSa~EVL~~L~ 1131 (1142)
.||.+|||+.|+++++.
T Consensus 258 ~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 258 VNPKDRPSFSELVSALG 274 (275)
T ss_pred CCcccCCCHHHHHHHhc
Confidence 99999999999999875
No 300
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.8e-32 Score=300.53 Aligned_cols=248 Identities=27% Similarity=0.431 Sum_probs=192.2
Q ss_pred eeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGN 891 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~ 891 (1142)
++||+|+||.||+|.+. +..+++|+..... . ....+.+ .+|+.+++++.||||+++++++.+...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~--~-~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~~------- 66 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTL--P-PDLKRKF----LQEAEILKQYDHPNIVKLIGVCVQKQP------- 66 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccC--C-HHHHHHH----HHHHHHHHhCCCCCeEEEEEEEecCCC-------
Confidence 47999999999999975 6778888654322 1 1223333 789999999999999999999876553
Q ss_pred CccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCC
Q 001142 892 PEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADG 971 (1142)
Q Consensus 892 ~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~ 971 (1142)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+++++||||||+||+++.+
T Consensus 67 -------~~~v~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~------ 129 (251)
T cd05041 67 -------IYIVMELVPGGSLLTFLRKK----KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGEN------ 129 (251)
T ss_pred -------eEEEEEcCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCC------
Confidence 49999999999999998752 2357899999999999999999999999999999999999877
Q ss_pred CCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 001142 972 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPY 1050 (1142)
Q Consensus 972 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf 1050 (1142)
+.++|+|||.+......... .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||
T Consensus 130 -~~~~l~d~g~~~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~i~~~l~t~~~~p~ 196 (251)
T cd05041 130 -NVLKISDFGMSREEEGGIYT--------VSDGLKQIPIKWTAPEALNY----GRYTSESDVWSYGILLWETFSLGDTPY 196 (251)
T ss_pred -CcEEEeeccccccccCCcce--------eccccCcceeccCChHhhcc----CCCCcchhHHHHHHHHHHHHhccCCCC
Confidence 78999999998754321110 00111234567999999865 467899999999999999999 88999
Q ss_pred CCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 001142 1051 MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF 1130 (1142)
Q Consensus 1051 ~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L 1130 (1142)
...........+........+ ...+..+.+++.+||+.+|.+|||+.|+++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l 249 (251)
T cd05041 197 PGMSNQQTRERIESGYRMPAP---------------------------QLCPEEIYRLMLQCWAYDPENRPSFSEIYNEL 249 (251)
T ss_pred ccCCHHHHHHHHhcCCCCCCC---------------------------ccCCHHHHHHHHHHhccChhhCcCHHHHHHHh
Confidence 876655555444332211110 13456799999999999999999999999876
Q ss_pred H
Q 001142 1131 V 1131 (1142)
Q Consensus 1131 ~ 1131 (1142)
.
T Consensus 250 ~ 250 (251)
T cd05041 250 Q 250 (251)
T ss_pred h
Confidence 3
No 301
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=319.74 Aligned_cols=255 Identities=24% Similarity=0.424 Sum_probs=214.7
Q ss_pred CcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
+.+..++||-|-||.||.|.|+.-...|+|+.++.. ..+.++| +.|+.+|+.++|||+|+++|+|..+..+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED---tMeveEF----LkEAAvMKeikHpNLVqLLGVCT~EpPF-- 338 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTHEPPF-- 338 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc---chhHHHH----HHHHHHHHhhcCccHHHHhhhhccCCCe--
Confidence 357889999999999999999877767776666642 3456667 8999999999999999999999865543
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
|||+|||..|+|.+|++.+. +..++.-..+.|+.||..|++||..+++|||||-+.|.|+.++
T Consensus 339 ------------YIiTEfM~yGNLLdYLRecn---r~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEn-- 401 (1157)
T KOG4278|consen 339 ------------YIITEFMCYGNLLDYLRECN---RSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN-- 401 (1157)
T ss_pred ------------EEEEecccCccHHHHHHHhc---hhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccccc--
Confidence 99999999999999999853 3457888899999999999999999999999999999999988
Q ss_pred cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-C
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-L 1046 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G 1046 (1142)
..||++|||+++.+.....+ ++.+ .--...|.|||-+.. ..++.|+|||+|||+|||+.| |
T Consensus 402 -----hiVKvADFGLsRlMtgDTYT---AHAG------AKFPIKWTAPEsLAy----NtFSiKSDVWAFGVLLWEIATYG 463 (1157)
T KOG4278|consen 402 -----HIVKVADFGLSRLMTGDTYT---AHAG------AKFPIKWTAPESLAY----NTFSIKSDVWAFGVLLWEIATYG 463 (1157)
T ss_pred -----ceEEeeccchhhhhcCCcee---cccC------ccCcccccCcccccc----cccccchhhHHHHHHHHHHHhcC
Confidence 78999999999987664432 1211 123567999999875 678899999999999999999 8
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
..||.+.+..+++..+..+.+..-+ ..+++.+.+|++.||++.|.+||+++|+
T Consensus 464 MsPYPGidlSqVY~LLEkgyRM~~P---------------------------eGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 464 MSPYPGIDLSQVYGLLEKGYRMDGP---------------------------EGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred CCCCCCccHHHHHHHHhccccccCC---------------------------CCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 9999999999999888777653322 1778889999999999999999999999
Q ss_pred HHHHHhh
Q 001142 1127 YEMFVAR 1133 (1142)
Q Consensus 1127 L~~L~~~ 1133 (1142)
-+.++-.
T Consensus 517 HqafEtm 523 (1157)
T KOG4278|consen 517 HQAFETM 523 (1157)
T ss_pred HHHHHHH
Confidence 8776654
No 302
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.4e-32 Score=310.21 Aligned_cols=265 Identities=21% Similarity=0.322 Sum_probs=193.2
Q ss_pred CCcceeeeecccCceEEEEEEECC------------------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS------------------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR 868 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~------------------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~ 868 (1142)
.+|++.++||+|+||.||++.+.+ ..+|+|+.... ........+ .+|+.++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~---~~~~~~~~~----~~E~~~l~~l~ 77 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED---ANKNARNDF----LKEIKIMSRLK 77 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc---CCHHHHHHH----HHHHHHHHhCC
Confidence 468999999999999999986532 23566654321 112222334 78999999999
Q ss_pred CCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc------CCCCCCHHHHHHHHHHHHHHH
Q 001142 869 HSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------GEKHVSVKLALFIAQDVAAAL 942 (1142)
Q Consensus 869 HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~------~~~~ls~~~i~~Ia~qIa~gL 942 (1142)
||||+++++++...+. .++||||+++++|.+++...... ....+++..+..++.||+.||
T Consensus 78 ~~~i~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al 143 (296)
T cd05095 78 DPNIIRLLAVCITSDP--------------LCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGM 143 (296)
T ss_pred CCCcceEEEEEecCCc--------------cEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHH
Confidence 9999999999876553 39999999999999999763211 112477889999999999999
Q ss_pred HHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc
Q 001142 943 VELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH 1022 (1142)
Q Consensus 943 ~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1022 (1142)
+|||++||+||||||+|||++.+ +.++|+|||++..+...... .......+++.|+|||...+
T Consensus 144 ~~lH~~~i~H~dlkp~Nili~~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~-- 206 (296)
T cd05095 144 KYLSSLNFVHRDLATRNCLVGKN-------YTIKIADFGMSRNLYSGDYY--------RIQGRAVLPIRWMSWESILL-- 206 (296)
T ss_pred HHHHHCCeecccCChheEEEcCC-------CCEEeccCcccccccCCcce--------eccCcCcCccccCCHHHHhc--
Confidence 99999999999999999999876 78999999998754321110 01112235678999998765
Q ss_pred CCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhh
Q 001142 1023 KPNLYGLEVDIWSYGCLLLELLT--LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE 1100 (1142)
Q Consensus 1023 ~~~~~s~ksDVwSLGviL~ELLt--G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1100 (1142)
..++.++|||||||++|||++ |..||...+..+............. . ...... ...
T Consensus 207 --~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~~---~~~ 264 (296)
T cd05095 207 --GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQG----------------R-QVYLPK---PAL 264 (296)
T ss_pred --CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhcc----------------c-cccCCC---CCC
Confidence 468899999999999999998 7789976655544332211000000 0 000000 013
Q ss_pred hHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 001142 1101 TLSFLVDVFRRCTEENPTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1101 ~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~ 1131 (1142)
+++.+.+++.+||+.||.+||++.+|++.+.
T Consensus 265 ~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 265 CPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 4567999999999999999999999998764
No 303
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.8e-33 Score=318.62 Aligned_cols=290 Identities=17% Similarity=0.222 Sum_probs=204.2
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|++|.||+|.. .+..+++|+...+ .......+. +.+|+.++++++||||+++++++.....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~--~~~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 78 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHA--FDVPTLAKR----TLRELKILRHFKHDNIIAIRDILRPPGA 78 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccc--cccccchHH----HHHHHHHHHhcCCCCccCHHHhccccCC
Confidence 5689999999999999999987 4667787765322 111122222 3689999999999999999998764321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.....++||||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 79 ----------~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~ 142 (334)
T cd07855 79 ----------DFKDVYVVMDLME-SDLHHIIHS-----DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE 142 (334)
T ss_pred ----------CCceEEEEEehhh-hhHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence 1235699999996 688888764 345899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++......... .........|+..|+|||++.. ...++.++|||||||++|+|+
T Consensus 143 ~-------~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~~Di~slG~~l~el~ 206 (334)
T cd07855 143 D-------CELRIGDFGMARGLSSSPTE------HKYFMTEYVATRWYRAPELLLS---LPEYTTAIDMWSVGCIFAEML 206 (334)
T ss_pred C-------CcEEecccccceeecccCcC------CCcccccccccccccChHHhcC---CcccccccchHHHHHHHHHHH
Confidence 7 78999999998754332111 0011123468899999999864 235789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhcccccccc---cccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEV---AQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
+|+.||.+.+.......+.. ...+. ...+........... ................+..+.++|.+||+.||.+|
T Consensus 207 ~g~~pf~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 285 (334)
T cd07855 207 GRRQLFPGKNYVHQLKLILSVLGSPS-EEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEER 285 (334)
T ss_pred cCCCccCCCChHHHHHHHHHHhCCCh-hHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhC
Confidence 99999987665544443322 11111 100100000000000 00000000001112456789999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||+.+++.|+|+..-
T Consensus 286 pt~~~~l~~~~~~~~ 300 (334)
T cd07855 286 ITVEQALQHPFLAQY 300 (334)
T ss_pred cCHHHHHhChhhhhc
Confidence 999999999999644
No 304
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=9.9e-33 Score=308.26 Aligned_cols=278 Identities=21% Similarity=0.258 Sum_probs=198.6
Q ss_pred cceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|++.+.||.|++|.||+|.+ .+..+++|+...+.. .....+.+ .+|+.++++++||||+++++++.+.+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~----~~E~~~l~~l~~~~iv~~~~~~~~~~--- 71 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE--DEGVPSTA----IREISLLKELNHPNIVRLLDVVHSEN--- 71 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc--cccchhHH----HHHHHHHHhcCCCCccCHhheeccCC---
Confidence 67889999999999999987 467788887654321 11111223 68999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..++||||++ ++|.+++... ....+++..+..++.|++.||+|||+++++||||+|+||+++.+
T Consensus 72 -----------~~~iv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~- 135 (283)
T cd07835 72 -----------KLYLVFEFLD-LDLKKYMDSS---PLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDRE- 135 (283)
T ss_pred -----------eEEEEEeccC-cCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC-
Confidence 3499999995 7999998752 22368999999999999999999999999999999999999886
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++|+|||.+........ ......+++.|+|||++.+ ...++.++||||||+++|+|++|
T Consensus 136 ------~~~~l~df~~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~~l~~l~~g 196 (283)
T cd07835 136 ------GALKLADFGLARAFGVPVR----------TYTHEVVTLWYRAPEILLG---SRQYSTPVDIWSIGCIFAEMVNR 196 (283)
T ss_pred ------CcEEEeecccccccCCCcc----------ccCccccccCCCCCceeec---CcccCcHHHHHHHHHHHHHHHhC
Confidence 7899999999865432111 1112246888999998765 23567899999999999999999
Q ss_pred CCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhcccc--cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1047 QVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCH--EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+.||...+.......+ .....+. ...+....... ...+... ............+..+.+++.+||+.||.+|||+
T Consensus 197 ~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~ 274 (283)
T cd07835 197 RPLFPGDSEIDQLFRIFRTLGTPD-EDVWPGVTSLPDYKPTFPKW-ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISA 274 (283)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCC-hHHhhhhhhchhhhhhcccc-cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCH
Confidence 9999876654433333 2211111 11110000000 0000000 0000011112455779999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.|+++|+|+
T Consensus 275 ~~il~~~~~ 283 (283)
T cd07835 275 KAALQHPYF 283 (283)
T ss_pred HHHhcCCCC
Confidence 999999986
No 305
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.5e-32 Score=307.75 Aligned_cols=270 Identities=23% Similarity=0.334 Sum_probs=191.5
Q ss_pred cceeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 809 LSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
|++.+.||+|+||.||+|++ .+..+++|... ... ....... +.+|+.++++++||||+++++++...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~--~~~-~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK--PES-GGNHIAD----LKKEIEILRNLYHENIVKYKGICTED 78 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcC--ccc-cHHHHHH----HHHHHHHHHhCCCCCeeeeeeEEecC
Confidence 68899999999999999985 24557777643 221 1222233 47999999999999999999988754
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+. ...++||||+++++|.+++... ...+++..+..++.||+.||+|||++||+||||||+||++
T Consensus 79 ~~------------~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~ 142 (284)
T cd05079 79 GG------------NGIKLIMEFLPSGSLKEYLPRN----KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 142 (284)
T ss_pred CC------------CceEEEEEccCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE
Confidence 21 1348999999999999998651 2358999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.++|+|||++..+...... ........++..|+|||++.+ ..++.++|||||||++|+
T Consensus 143 ~~~-------~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~apE~~~~----~~~~~~~Di~slG~il~e 204 (284)
T cd05079 143 ESE-------HQVKIGDFGLTKAIETDKEY-------YTVKDDLDSPVFWYAPECLIQ----SKFYIASDVWSFGVTLYE 204 (284)
T ss_pred cCC-------CCEEECCCccccccccCccc-------eeecCCCCCCccccCHHHhcc----CCCCccccchhhhhhhhh
Confidence 877 78999999999765432111 001123456778999999865 467899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++++.|+..... ......... ............ ....... .....+..+.+|+.+||+.||.+||
T Consensus 205 llt~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp 271 (284)
T cd05079 205 LLTYCDSESSPMT-LFLKMIGPTHGQMTVTRLVRVL---------EEGKRLP---RPPNCPEEVYQLMRKCWEFQPSKRT 271 (284)
T ss_pred hhcCCCCCccccc-hhhhhcccccccccHHHHHHHH---------HcCccCC---CCCCCCHHHHHHHHHHccCCcccCc
Confidence 9998776542111 011100000 000000000000 0000000 0114567899999999999999999
Q ss_pred CHHHHHHHHHh
Q 001142 1122 TAGDLYEMFVA 1132 (1142)
Q Consensus 1122 Sa~EVL~~L~~ 1132 (1142)
|+.++++.+..
T Consensus 272 t~~~il~~l~~ 282 (284)
T cd05079 272 TFQNLIEGFEA 282 (284)
T ss_pred CHHHHHHHHHh
Confidence 99999998764
No 306
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.9e-32 Score=310.39 Aligned_cols=258 Identities=21% Similarity=0.336 Sum_probs=196.4
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--Cc----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SA----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~----~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
...+|+..+.||+|+||.||+|.+. +. .+++|+. ... ........ +.+|+.++++++||||++++++
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~--~~~-~~~~~~~~----~~~e~~~~~~l~h~niv~~~~~ 77 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NET-TGPKANVE----FMDEALIMASMDHPHLVRLLGV 77 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEec--ccc-CCHHHHHH----HHHHHHHHHhCCCCCcccEEEE
Confidence 3457889999999999999999873 33 2455543 221 11222223 3789999999999999999998
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
+.... .++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+
T Consensus 78 ~~~~~---------------~~~v~e~~~~g~l~~~~~~----~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~ 138 (303)
T cd05110 78 CLSPT---------------IQLVTQLMPHGCLLDYVHE----HKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAAR 138 (303)
T ss_pred EcCCC---------------ceeeehhcCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccc
Confidence 86432 2799999999999999875 1235889999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
||+++.+ +.+||+|||+++........ .......++..|+|||.+.+ ..++.++|||||||
T Consensus 139 Nill~~~-------~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~----~~~~~~~DiwslG~ 199 (303)
T cd05110 139 NVLVKSP-------NHVKITDFGLARLLEGDEKE--------YNADGGKMPIKWMALECIHY----RKFTHQSDVWSYGV 199 (303)
T ss_pred eeeecCC-------CceEEccccccccccCcccc--------cccCCCccccccCCHHHhcc----CCCChHHHHHHHHH
Confidence 9999876 67999999999765432111 01112345778999999865 56789999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
++|||++ |+.||.+....+....+..+..+..+ ...+..+.+++.+||..+|
T Consensus 200 ~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~c~~~~p 252 (303)
T cd05110 200 TIWELMTFGGKPYDGIPTREIPDLLEKGERLPQP---------------------------PICTIDVYMVMVKCWMIDA 252 (303)
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC---------------------------CCCCHHHHHHHHHHcCCCh
Confidence 9999997 89999876655555554433322111 0234568999999999999
Q ss_pred CCCCCHHHHHHHHHhhc
Q 001142 1118 TERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~ 1134 (1142)
++||++.++++.+....
T Consensus 253 ~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 253 DSRPKFKELAAEFSRMA 269 (303)
T ss_pred hhCcCHHHHHHHHHHHH
Confidence 99999999999887653
No 307
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.7e-32 Score=300.55 Aligned_cols=250 Identities=28% Similarity=0.467 Sum_probs=196.3
Q ss_pred cceeeeecccCceEEEEEEECC------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGS------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
+++.+.||+|+||.||++.+.. ..+|+|+.... . .....+.+ ..|+.++..++|+||+++++++.+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~--~-~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~ 73 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKED--A-DEQQIEEF----LREARIMRKLDHPNIVKLLGVCTEE 73 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCC--C-ChHHHHHH----HHHHHHHHhcCCCchheEEEEEcCC
Confidence 3678899999999999999865 55777765322 1 11133344 7899999999999999999998865
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+ ..++||||+++++|.+++.... ...+++..+..++.|++.||+|||+.|++|+||||+||++
T Consensus 74 ~--------------~~~~i~e~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~ 136 (258)
T smart00219 74 E--------------PLMIVMEYMEGGDLLDYLRKNR---PKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV 136 (258)
T ss_pred C--------------eeEEEEeccCCCCHHHHHHhhh---hccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE
Confidence 4 3499999999999999997621 1128999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.++|+|||.+......... ......+++.|+|||.+.. ..++.++||||+|+++++
T Consensus 137 ~~~-------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~Pe~~~~----~~~~~~~Di~slG~i~~~ 196 (258)
T smart00219 137 GEN-------LVVKISDFGLSRDLYDDDYY---------KKKGGKLPIRWMAPESLKD----GKFTSKSDVWSFGVLLWE 196 (258)
T ss_pred ccC-------CeEEEcccCCceeccccccc---------ccccCCCcccccChHHhcc----CCCCcchhHHHHHHHHHH
Confidence 887 78999999999765432111 0001226788999999854 567899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++ |..||...........+.....+..+. ..+..+.+++.+||..||.+||
T Consensus 197 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~i~~~l~~~p~~Rp 249 (258)
T smart00219 197 IFTLGESPYPGMSNEEVLEYLKKGYRLPKPE---------------------------NCPPEIYKLMLQCWAEDPEDRP 249 (258)
T ss_pred HHhCCCCCCCCCCHHHHHHHHhcCCCCCCCC---------------------------cCCHHHHHHHHHHCcCChhhCc
Confidence 998 889998766666666655443322110 3456799999999999999999
Q ss_pred CHHHHHHH
Q 001142 1122 TAGDLYEM 1129 (1142)
Q Consensus 1122 Sa~EVL~~ 1129 (1142)
|+.|+++.
T Consensus 250 t~~~ll~~ 257 (258)
T smart00219 250 TFSELVEI 257 (258)
T ss_pred CHHHHHhh
Confidence 99999875
No 308
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.5e-32 Score=303.39 Aligned_cols=247 Identities=27% Similarity=0.318 Sum_probs=195.4
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 815 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 815 LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
||.|++|.||+|++. +..+++|+....... ..... ..+.+|+.+++.++||||+++++.+.+...
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------- 67 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-ETGQQ----EHIFSEKEILEECNHPFIVKLYRTFKDKKY-------- 67 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcch-hhhHH----HHHHHHHHHHHhCCCCCEeeeeeeEEcCCc--------
Confidence 799999999999986 677888876432211 11222 234799999999999999999999876553
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 972 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~ 972 (1142)
.++||||+++++|.+++.+ ...+++..+..++.||+.||.|||+++++|+||+|+||+++.+
T Consensus 68 ------~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~------- 129 (262)
T cd05572 68 ------IYMLMEYCLGGELWTILRD-----RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSN------- 129 (262)
T ss_pred ------cEEEEecCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCC-------
Confidence 4999999999999999976 2458999999999999999999999999999999999999887
Q ss_pred CeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001142 973 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1052 (1142)
Q Consensus 973 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~ 1052 (1142)
+.++|+|||.+....... ......+++.|+|||.+.. ..++.++|+||||+++|+|++|..||..
T Consensus 130 ~~~~l~df~~~~~~~~~~-----------~~~~~~~~~~~~~PE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~~~ 194 (262)
T cd05572 130 GYVKLVDFGFAKKLKSGQ-----------KTWTFCGTPEYVAPEIILN----KGYDFSVDYWSLGILLYELLTGRPPFGE 194 (262)
T ss_pred CCEEEeeCCcccccCccc-----------ccccccCCcCccChhHhcC----CCCCChhhhhhhHHHHHHHHhCCCCcCC
Confidence 789999999987654321 1113357889999999865 4578999999999999999999999986
Q ss_pred CC--HHHHHHHHHhCC-CCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC-----HH
Q 001142 1053 LS--ELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT-----AG 1124 (1142)
Q Consensus 1053 ~~--~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS-----a~ 1124 (1142)
.. ..+....+..+. .+..+ ...++.+.+++.+||+.+|++||+ +.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 247 (262)
T cd05572 195 DDEDPMEIYNDILKGNGKLEFP---------------------------NYIDKAAKDLIKQLLRRNPEERLGNLKGGIK 247 (262)
T ss_pred CCCCHHHHHHHHhccCCCCCCC---------------------------cccCHHHHHHHHHHccCChhhCcCCcccCHH
Confidence 55 444444433211 11100 022557999999999999999999 99
Q ss_pred HHHHHHHhhc
Q 001142 1125 DLYEMFVART 1134 (1142)
Q Consensus 1125 EVL~~L~~~~ 1134 (1142)
|+++|+|+..
T Consensus 248 ~l~~~~~~~~ 257 (262)
T cd05572 248 DIKKHKWFNG 257 (262)
T ss_pred HHhcChhhhC
Confidence 9999999974
No 309
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.2e-32 Score=309.44 Aligned_cols=282 Identities=21% Similarity=0.240 Sum_probs=195.8
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
...+|.+.+.||+|+||.||+|.. .+..+++|+...+... ..... +.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~----~~~e~~~l~~l~h~ni~~~~~~~~~~ 75 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE---GVPFT----AIREASLLKGLKHANIVLLHDIIHTK 75 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC---CCcHH----HHHHHHHHHhcCCCCEeEEEEEEecC
Confidence 346799999999999999999986 4677888876443211 11112 26899999999999999999998764
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ..++||||+. ++|.+++.. ....+++..+..++.||+.||.|||++||+|+||||+|||+
T Consensus 76 ~--------------~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~ 136 (291)
T cd07870 76 E--------------TLTFVFEYMH-TDLAQYMIQ----HPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI 136 (291)
T ss_pred C--------------eEEEEEeccc-CCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE
Confidence 4 3499999996 788777654 12357888899999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.++|+|||+++........ .....+++.|+|||++.+ ...++.++|||||||++|+
T Consensus 137 ~~~-------~~~~l~Dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~~l~~ 196 (291)
T cd07870 137 SYL-------GELKLADFGLARAKSIPSQT----------YSSEVVTLWYRPPDVLLG---ATDYSSALDIWGAGCIFIE 196 (291)
T ss_pred cCC-------CcEEEeccccccccCCCCCC----------CCCccccccccCCceeec---CCCCCcHHHHHHHHHHHHH
Confidence 877 78999999998654321111 122347889999999864 2346789999999999999
Q ss_pred HHhCCCCCCCCCHH-HHHHHH-HhCCCCCch--hHHhhhcccccccccc-cCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1043 LLTLQVPYMGLSEL-EIHDLI-QMGKRPRLT--DELEALGSCHEHEVAQ-SGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~-el~~~I-~~~~~p~l~--~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
|++|+.||.+.... +....+ .....|... ................ ..............+..+.+++.+|++.||
T Consensus 197 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp 276 (291)
T cd07870 197 MLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFP 276 (291)
T ss_pred HHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCc
Confidence 99999999765432 222222 111111100 0000000000000000 000000000011235678999999999999
Q ss_pred CCCCCHHHHHHHHHh
Q 001142 1118 TERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~ 1132 (1142)
.+|||+.|++.|+|+
T Consensus 277 ~~R~t~~~~l~h~~~ 291 (291)
T cd07870 277 KDRISAQDALLHPYF 291 (291)
T ss_pred ccCcCHHHHhcCCCC
Confidence 999999999999985
No 310
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.2e-32 Score=308.65 Aligned_cols=249 Identities=21% Similarity=0.261 Sum_probs=185.4
Q ss_pred eecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHH---HHhhCCCCCccceeeeEecCCCCCCC
Q 001142 814 EAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR---MLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 814 ~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~---iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
.||+|+||.||++.+. +..+|+|+...+....... ...+ .+|.. ++....||||+.+++++...+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---- 71 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLA----LNERIMLSLVSTGDCPFIVCMTYAFHTPDK---- 71 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH-HHHH----HHHHHHHHHHhhCCCCcEeEEEEEEecCCe----
Confidence 4899999999999874 5678888754332211111 1111 23433 3334479999999999876543
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||+++|+||||||+|||++.+
T Consensus 72 ----------~~lv~e~~~~~~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~--- 133 (279)
T cd05633 72 ----------LCFILDLMNGGDLHYHLSQ-----HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH--- 133 (279)
T ss_pred ----------EEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC---
Confidence 4999999999999998875 2469999999999999999999999999999999999999877
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1048 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~ 1048 (1142)
+.++|+|||++....... .....||+.|+|||.+.. +..++.++|||||||++|+|++|..
T Consensus 134 ----~~~~l~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~~l~~l~~g~~ 194 (279)
T cd05633 134 ----GHVRISDLGLACDFSKKK------------PHASVGTHGYMAPEVLQK---GTAYDSSADWFSLGCMLFKLLRGHS 194 (279)
T ss_pred ----CCEEEccCCcceeccccC------------ccCcCCCcCccCHHHhcC---CCCCCchhhhHHHHHHHHHHHhCCC
Confidence 789999999986443211 112358999999999753 2457899999999999999999999
Q ss_pred CCCCCCHHH--HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----
Q 001142 1049 PYMGLSELE--IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP----- 1121 (1142)
Q Consensus 1049 Pf~~~~~~e--l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP----- 1121 (1142)
||....... ............ .....++.+.+++.+||+.||.+||
T Consensus 195 pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 247 (279)
T cd05633 195 PFRQHKTKDKHEIDRMTLTVNVE---------------------------LPDSFSPELKSLLEGLLQRDVSKRLGCLGR 247 (279)
T ss_pred CcCCCCCcCHHHHHHHhhcCCcC---------------------------CccccCHHHHHHHHHHhcCCHHHhcCCCCC
Confidence 997532211 111111000000 0114556799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++|+|++.-
T Consensus 248 ~~~~~~~h~~~~~~ 261 (279)
T cd05633 248 GAQEVKEHVFFKGI 261 (279)
T ss_pred CHHHHHhCccccCC
Confidence 69999999999864
No 311
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=302.00 Aligned_cols=269 Identities=24% Similarity=0.340 Sum_probs=209.5
Q ss_pred cce-eeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001142 809 LSS-CDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 884 (1142)
Q Consensus 809 y~l-~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~ 884 (1142)
|.+ .+.||+|+|+.|--+.. .+..+||||. ++. .+... .++.+|++++.+.+ |+||++++++|+++..
T Consensus 79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKii--dKq-~gHsR-----~RvfREVe~f~~Cqgh~nilqLiefFEdd~~ 150 (463)
T KOG0607|consen 79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKII--DKQ-PGHSR-----SRVFREVETFYQCQGHKNILQLIEFFEDDTR 150 (463)
T ss_pred HHhHHHHhcCccceeeeeeeeeccchhhhhhhh--hcC-CchHH-----HHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence 443 47899999999988875 6788999984 433 22222 23369999999996 9999999999998775
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+ |||||-+.||+|..+|++ ...|++.++.++.++|+.||.|||.+||.||||||+|||...
T Consensus 151 F--------------YLVfEKm~GGplLshI~~-----~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~ 211 (463)
T KOG0607|consen 151 F--------------YLVFEKMRGGPLLSHIQK-----RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCES 211 (463)
T ss_pred E--------------EEEEecccCchHHHHHHH-----hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecC
Confidence 5 999999999999999987 467999999999999999999999999999999999999965
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ ...-||||||.++.-+...... .....+..-+.+|+..|||||+..-.. ....|+.+.|.||||||+|-|
T Consensus 212 pn----~vsPvKiCDfDLgSg~k~~~~~---spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYIm 284 (463)
T KOG0607|consen 212 PN----KVSPVKICDFDLGSGIKLNNDC---SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIM 284 (463)
T ss_pred CC----CcCceeeeccccccccccCCCC---CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHH
Confidence 42 2345999999988654332211 112233445668999999999875322 235789999999999999999
Q ss_pred HhCCCCCCCCC---------------HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHH
Q 001142 1044 LTLQVPYMGLS---------------ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1108 (1142)
Q Consensus 1044 LtG~~Pf~~~~---------------~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1108 (1142)
++|.+||.+.- ...+++.|+.+........| ..++.+..++
T Consensus 285 LsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdW------------------------ahIS~eakdl 340 (463)
T KOG0607|consen 285 LSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDW------------------------AHISSEAKDL 340 (463)
T ss_pred HhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhh------------------------HHhhHHHHHH
Confidence 99999997631 23356666666542222111 1677889999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+..+|..|+.+|.++.+++.|||+..-
T Consensus 341 isnLlvrda~~rlsa~~vlnhPw~~~~ 367 (463)
T KOG0607|consen 341 ISNLLVRDAKQRLSAAQVLNHPWVQRC 367 (463)
T ss_pred HHHHHhccHHhhhhhhhccCCcccccc
Confidence 999999999999999999999999754
No 312
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=2.6e-32 Score=302.29 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=197.6
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCC-ChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGS-SADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.+|++.+.||+|+||.||+|.+ .+..+++|+........ ...... .+.+|+.++++++||||+++++++.+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~----~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 77 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVN----ALECEIQLLKNLRHDRIVQYYGCLRDPE 77 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHH----HHHHHHHHHHHcCCCCcceEEEEEEcCC
Confidence 4689999999999999999987 46678888754332111 112222 3478999999999999999999986532
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. ...++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+||+++
T Consensus 78 ~------------~~~~~v~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~ 140 (264)
T cd06653 78 E------------KKLSIFVEYMPGGSIKDQLKA-----YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD 140 (264)
T ss_pred C------------CEEEEEEEeCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence 1 245899999999999999875 23588999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+......... . .......++..|+|||.+.+ ..++.++|||||||++|+|
T Consensus 141 ~~-------~~~~l~dfg~~~~~~~~~~~------~-~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 202 (264)
T cd06653 141 SA-------GNVKLGDFGASKRIQTICMS------G-TGIKSVTGTPYWMSPEVISG----EGYGRKADVWSVACTVVEM 202 (264)
T ss_pred CC-------CCEEECcccccccccccccc------C-ccccccCCcccccCHhhhcC----CCCCccccHHHHHHHHHHH
Confidence 77 78999999999764321100 0 01123458899999999875 4577899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++|+.||...........+... ..+.++ ...++.+.+++.+||+ +|..||+
T Consensus 203 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p---------------------------~~~~~~~~~~i~~~l~-~~~~r~~ 254 (264)
T cd06653 203 LTEKPPWAEYEAMAAIFKIATQPTKPMLP---------------------------DGVSDACRDFLKQIFV-EEKRRPT 254 (264)
T ss_pred HhCCCCCCccCHHHHHHHHHcCCCCCCCC---------------------------cccCHHHHHHHHHHhc-CcccCcc
Confidence 9999999875544433332211 111111 1455679999999999 5799999
Q ss_pred HHHHHHHHH
Q 001142 1123 AGDLYEMFV 1131 (1142)
Q Consensus 1123 a~EVL~~L~ 1131 (1142)
+.+++.|+|
T Consensus 255 ~~~~~~~~~ 263 (264)
T cd06653 255 AEFLLRHPF 263 (264)
T ss_pred HHHHhcCCC
Confidence 999999986
No 313
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.6e-32 Score=316.05 Aligned_cols=288 Identities=18% Similarity=0.215 Sum_probs=202.7
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|.+.+.||+|+||+||+|++. +..+++|..... .........+ .+|+.+++.++||||+++++++.....
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~ni~~~~~~~~~~~~ 78 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANA--FDNRIDAKRT----LREIKLLRHLDHENVIAIKDIMPPPHR 78 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccc--ccccchhHHH----HHHHHHHHhcCCCCccchHHheecccc
Confidence 46899999999999999999974 566777764322 1111122222 689999999999999999998765321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. .....++||||+. ++|.+++.. ...+++..+..++.||+.||.|||+++++||||||+||+++.
T Consensus 79 ~---------~~~~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~ 143 (337)
T cd07858 79 E---------AFNDVYIVYELMD-TDLHQIIRS-----SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA 143 (337)
T ss_pred c---------ccCcEEEEEeCCC-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence 1 1234699999996 789888864 346999999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++........ ......++..|+|||.+... ..++.++|||||||++|+|+
T Consensus 144 ~-------~~~kL~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~---~~~~~~~DiwslG~il~~l~ 203 (337)
T cd07858 144 N-------CDLKICDFGLARTTSEKGD----------FMTEYVVTRWYRAPELLLNC---SEYTTAIDVWSVGCIFAELL 203 (337)
T ss_pred C-------CCEEECcCccccccCCCcc----------cccccccccCccChHHHhcC---CCCCCcccHHHHHHHHHHHH
Confidence 7 7899999999975432110 11133578899999997641 34789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCC---CCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGS---GFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||.+.+.......+...........+............+... ...........++.+.+++.+||+.||++||
T Consensus 204 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 283 (337)
T cd07858 204 GRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRI 283 (337)
T ss_pred cCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhcc
Confidence 9999998765544443332211111111111000000000000000 0000011124567899999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.++++|+|+..-
T Consensus 284 s~~ell~h~~~~~~ 297 (337)
T cd07858 284 TVEEALAHPYLASL 297 (337)
T ss_pred CHHHHHcCcchhhh
Confidence 99999999999753
No 314
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=2.2e-32 Score=297.14 Aligned_cols=251 Identities=29% Similarity=0.491 Sum_probs=199.1
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|++|.||++.+. +..+++|+...... .....+ .+|+.++++++||||+++++++....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 70 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEKI----INEIQILKKCKHPNIVKYYGSYLKKD-- 70 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHHH----HHHHHHHHhCCCCCEeEEEEEEecCC--
Confidence 5889999999999999999985 56677777543221 223333 78999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..+++|||+++++|.+++... ...+++..+..++.|++.||.|||++|++||||+|+||+++.+
T Consensus 71 ------------~~~l~~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~ 134 (253)
T cd05122 71 ------------ELWIVMEFCSGGSLKDLLKST----NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSD 134 (253)
T ss_pred ------------eEEEEEecCCCCcHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccC
Confidence 349999999999999998762 1468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+........ .....++..|+|||.+.+ ..++.++||||||+++++|++
T Consensus 135 -------~~~~l~d~~~~~~~~~~~~-----------~~~~~~~~~~~~PE~~~~----~~~~~~~Dv~slG~il~~l~~ 192 (253)
T cd05122 135 -------GEVKLIDFGLSAQLSDTKA-----------RNTMVGTPYWMAPEVING----KPYDYKADIWSLGITAIELAE 192 (253)
T ss_pred -------CeEEEeecccccccccccc-----------ccceecCCcccCHHHHcC----CCCCccccHHHHHHHHHHHHh
Confidence 7899999999876543210 123468889999999876 347889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||...+.......+.....+..... ...+..+.+++.+||+.||.+|||+.+
T Consensus 193 g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~i~~~l~~~p~~R~t~~~ 247 (253)
T cd05122 193 GKPPYSELPPMKALFKIATNGPPGLRNP-------------------------EKWSDEFKDFLKKCLQKNPEKRPTAEQ 247 (253)
T ss_pred CCCCCCCCchHHHHHHHHhcCCCCcCcc-------------------------cccCHHHHHHHHHHccCChhhCCCHHH
Confidence 9999987655444433332222111100 023567999999999999999999999
Q ss_pred HHHHHH
Q 001142 1126 LYEMFV 1131 (1142)
Q Consensus 1126 VL~~L~ 1131 (1142)
+++|+|
T Consensus 248 ~l~~~~ 253 (253)
T cd05122 248 LLKHPF 253 (253)
T ss_pred HhcCCC
Confidence 999986
No 315
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.3e-32 Score=316.43 Aligned_cols=291 Identities=23% Similarity=0.253 Sum_probs=205.1
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 881 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~ 881 (1142)
-.++|++.+.||+|+||.||+|.+. +..+++|... ...........+ .+|+.+++++ +||||+++++++..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~--~~~~~~~~~~~~----~~E~~~l~~l~~h~ni~~~~~~~~~ 78 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIF--DAFRNATDAQRT----FREIMFLQELGDHPNIVKLLNVIKA 78 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeec--cccCcchhhhhh----hHHHHHHHHhcCCCCccceeeeecc
Confidence 3467999999999999999999874 5567777542 211122222233 6899999999 99999999998865
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+. ...++||||++ ++|..++.. ..+++..+..++.||+.||.|||+.||+||||||+||+
T Consensus 79 ~~~------------~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nil 139 (337)
T cd07852 79 END------------KDIYLVFEYME-TDLHAVIRA------NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNIL 139 (337)
T ss_pred CCC------------ceEEEEecccc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 321 24699999997 699988864 26788999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||.+.......... .........||..|+|||++.+ ...++.++||||||+++|
T Consensus 140 l~~~-------~~~kl~d~g~~~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~sDi~slG~~l~ 204 (337)
T cd07852 140 LNSD-------CRVKLADFGLARSLSELEENP-----ENPVLTDYVATRWYRAPEILLG---STRYTKGVDMWSVGCILG 204 (337)
T ss_pred EcCC-------CcEEEeeccchhccccccccc-----cCcchhcccccccccCceeeec---cccccccchHHHHHHHHH
Confidence 9987 789999999997654322110 0112223468999999998764 245678999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|++|+.||.+....+....+...........+............. ..............+..+.+++.+||+.||.
T Consensus 205 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~ 284 (337)
T cd07852 205 EMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPN 284 (337)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcc
Confidence 9999999998766655444442222111111111110000000000 0000000111113567899999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001142 1119 ERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~s 1135 (1142)
+|||+.++++|+|+..-
T Consensus 285 ~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 285 KRLTAEEALEHPYVAQF 301 (337)
T ss_pred cccCHHHHhhChhhhhh
Confidence 99999999999988643
No 316
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-33 Score=294.10 Aligned_cols=275 Identities=23% Similarity=0.244 Sum_probs=201.8
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.++||+|+|+.||+++. ++..+|+|..... ...+.+.. ++|++..++++||||++++++...+..
T Consensus 21 ~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~----~~~~~e~~----~rEid~~rkf~s~~vl~l~dh~l~~~~ 92 (302)
T KOG2345|consen 21 KRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH----SQEDIEEA----LREIDNHRKFNSPNVLRLVDHQLREEK 92 (302)
T ss_pred ceEEEeeeecCCCceeeeeecccCcccchhhheeecc----chHHHHHH----HHHHHHHHhhCCcchHHHHHHHHHhhc
Confidence 4799999999999999999985 5566777764332 23333443 799999999999999999998764321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCeee
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENILI 962 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g--IvHrDLKp~NILl 962 (1142)
| .....||+++|+..|||.+.++.....+ ..+++.+++.|+.+|++||++||+.. +.||||||.|||+
T Consensus 93 ----D-----~~~~~yll~Pyy~~Gsl~d~i~~~k~kg-~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILl 162 (302)
T KOG2345|consen 93 ----D-----GKHEAYLLLPYYKRGSLLDEIERLKIKG-NFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILL 162 (302)
T ss_pred ----c-----CceeEEEEeehhccccHHHHHHHHhhcC-CccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEe
Confidence 1 2235799999999999999998765443 57999999999999999999999998 9999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
.+. +.++|.|||.++...........+.+-... .....|..|+|||.+.-. .....+.++|||||||+||+
T Consensus 163 s~~-------~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~-a~e~Ct~pyRAPELf~vk-~~~ti~ertDIWSLGCtLYa 233 (302)
T KOG2345|consen 163 SDS-------GLPVLMDLGSATQAPIQIEGSRQALRLQEW-AEERCTIPYRAPELFNVK-SHCTITERTDIWSLGCTLYA 233 (302)
T ss_pred cCC-------CceEEEeccCccccceEeechHHHHHHHHH-HHHhCCCcccCchheecc-cCcccccccchhhhhHHHHH
Confidence 886 789999999997654322221111110000 012368999999998653 34567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|+.|..||... + .+|....+.- . ......|.. ..+++.+.++|..||+.||.+||+
T Consensus 234 ~mf~~sPfe~~-----~---~~GgSlaLAv-------~--------n~q~s~P~~-~~yse~l~~lik~mlqvdP~qRP~ 289 (302)
T KOG2345|consen 234 MMFGESPFERI-----Y---QQGGSLALAV-------Q--------NAQISIPNS-SRYSEALHQLIKSMLQVDPNQRPT 289 (302)
T ss_pred HHHcCCcchHH-----h---hcCCeEEEee-------e--------ccccccCCC-CCccHHHHHHHHHHhcCCcccCCC
Confidence 99999999631 1 1121111000 0 000001111 136778999999999999999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
+.+++.++..
T Consensus 290 i~~ll~~~d~ 299 (302)
T KOG2345|consen 290 IPELLSKLDD 299 (302)
T ss_pred HHHHHHHHHh
Confidence 9999987653
No 317
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.9e-32 Score=306.92 Aligned_cols=257 Identities=28% Similarity=0.460 Sum_probs=204.4
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
...|++.+.||+|++|.||+|.+. +..+++|+...... ..+.+ .+|++++++++|+||+++++++....
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~ 88 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKELI----INEILIMKDCKHPNIVDYYDSYLVGD 88 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHHH----HHHHHHHHHCCCCCeeEEEEEEEECC
Confidence 445889999999999999999985 67788887653321 22333 78999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.... ..+++..+..++.|++.||.|||+.||+|+||+|+||+++
T Consensus 89 --------------~~~lv~e~~~~~~L~~~l~~~~----~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~ 150 (286)
T cd06614 89 --------------ELWVVMEYMDGGSLTDIITQNF----VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS 150 (286)
T ss_pred --------------EEEEEEeccCCCcHHHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc
Confidence 3599999999999999998621 3689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+........ ......++..|+|||++.+ ..++.++|||||||++|+|
T Consensus 151 ~~-------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Dv~slGvil~~l 209 (286)
T cd06614 151 KD-------GSVKLADFGFAAQLTKEKS----------KRNSVVGTPYWMAPEVIKR----KDYGPKVDIWSLGIMCIEM 209 (286)
T ss_pred CC-------CCEEECccchhhhhccchh----------hhccccCCcccCCHhHhcC----CCCCCccccHHHHHHHHHH
Confidence 77 7899999998865432111 1123347889999999865 4578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||...........+.....+.... ....+..+.+++.+||+.+|.+||++
T Consensus 210 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~ 264 (286)
T cd06614 210 AEGEPPYLREPPLRALFLITTKGIPPLKN-------------------------PEKWSPEFKDFLNKCLVKDPEKRPSA 264 (286)
T ss_pred HhCCCCCCCCCHHHHHHHHHhcCCCCCcc-------------------------hhhCCHHHHHHHHHHhccChhhCcCH
Confidence 99999998766554444433222211110 01245679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.++++|+|+...
T Consensus 265 ~~il~~~~~~~~ 276 (286)
T cd06614 265 EELLQHPFLKKA 276 (286)
T ss_pred HHHhhChHhhcc
Confidence 999999999874
No 318
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-33 Score=323.83 Aligned_cols=261 Identities=23% Similarity=0.355 Sum_probs=211.5
Q ss_pred CCCCcceeeeecccCceEEEEEEEC---Cc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG---SA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~---~~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
..++..+.++||+|.||+|++|.|+ ++ .||||+. +..... ....+| ++|+.+|.+|+|||+|++||.+
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKcl--r~d~l~-~~mddf----lrEas~M~~L~H~hliRLyGvV 180 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCL--RDDSLN-AIMDDF----LREASHMLKLQHPHLIRLYGVV 180 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEec--cCCccc-hhHHHH----HHHHHHHHhccCcceeEEeeee
Confidence 3456788999999999999999994 33 4566664 332222 245566 8999999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.. ..+|||+++.|||.+++++ .....|.....-.++.|||.||.||..+++|||||-..|
T Consensus 181 l~qp---------------~mMV~ELaplGSLldrLrk---a~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARN 242 (1039)
T KOG0199|consen 181 LDQP---------------AMMVFELAPLGSLLDRLRK---AKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARN 242 (1039)
T ss_pred ccch---------------hhHHhhhcccchHHHHHhh---ccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Confidence 8632 3799999999999999987 334578889999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
+|+-.. .+|||+|||+.+.+......+... ....-...|+|||.+.. ..++.++|||+|||+
T Consensus 243 lllasp-------rtVKI~DFGLmRaLg~ned~Yvm~-------p~rkvPfAWCaPEsLrh----~kFShaSDvWmyGVT 304 (1039)
T KOG0199|consen 243 LLLASP-------RTVKICDFGLMRALGENEDMYVMA-------PQRKVPFAWCAPESLRH----RKFSHASDVWMYGVT 304 (1039)
T ss_pred heeccc-------ceeeeecccceeccCCCCcceEec-------CCCcCcccccCHhHhcc----ccccccchhhhhhhh
Confidence 999765 689999999999887654332111 11224567999999986 678999999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
||||+| |..||.+....++.+.|..+.+..-+ ..+++++.+++..||...|+
T Consensus 305 iWEMFtyGEePW~G~~g~qIL~~iD~~erLpRP---------------------------k~csedIY~imk~cWah~pa 357 (1039)
T KOG0199|consen 305 IWEMFTYGEEPWVGCRGIQILKNIDAGERLPRP---------------------------KYCSEDIYQIMKNCWAHNPA 357 (1039)
T ss_pred HHhhhccCCCCCCCCCHHHHHHhccccccCCCC---------------------------CCChHHHHHHHHHhccCCcc
Confidence 999999 89999999998888887654432211 16788899999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001142 1119 ERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~s 1135 (1142)
+||||..|.+.+..+..
T Consensus 358 DRptFsair~~~~l~ea 374 (1039)
T KOG0199|consen 358 DRPTFSAIREDLVLAEA 374 (1039)
T ss_pred ccccHHHHHHhHHHHhc
Confidence 99999999876665543
No 319
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5e-32 Score=300.66 Aligned_cols=264 Identities=20% Similarity=0.335 Sum_probs=198.4
Q ss_pred cceeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~-----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
|.+.+.||+|+||.||+|.+. +..+|+|+...+. ......+++ .+|+.++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~----~~E~~~l~~l~h~~i~~~~~~~~~~~ 74 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI--FSSSDIEEF----LREAACMKEFDHPNVIKLIGVSLRSR 74 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc--CChHHHHHH----HHHHHHHhcCCCCCcceEEEEEccCC
Confidence 678899999999999999863 4567888764332 222333344 78999999999999999999886532
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
.. ......++++||+++++|.+++...... ....+++..+..++.||+.||+|||++||+||||||+||++
T Consensus 75 ~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili 146 (273)
T cd05074 75 AK--------GRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML 146 (273)
T ss_pred CC--------CcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE
Confidence 11 1122457899999999999887542211 12357899999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||.++........ .......+++.|++||.+.. ..++.++|||||||++|+
T Consensus 147 ~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~----~~~~~~sDi~slG~il~e 207 (273)
T cd05074 147 NEN-------MTVCVADFGLSKKIYSGDYY--------RQGCASKLPVKWLALESLAD----NVYTTHSDVWAFGVTMWE 207 (273)
T ss_pred cCC-------CCEEECcccccccccCCcce--------ecCCCccCchhhcCHhHHhc----CccchhhhhHHHHHHHHH
Confidence 876 78999999998764321110 01112235678999999865 457789999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++ |+.||.+....+....+......... ...+..+.+++.+||+.+|++||
T Consensus 208 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~~~l~~~p~~Rp 260 (273)
T cd05074 208 IMTRGQTPYAGVENSEIYNYLIKGNRLKQP---------------------------PDCLEDVYELMCQCWSPEPKCRP 260 (273)
T ss_pred HhhCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHcCCChhhCc
Confidence 999 89999877666555554433221110 13455799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001142 1122 TAGDLYEMFVA 1132 (1142)
Q Consensus 1122 Sa~EVL~~L~~ 1132 (1142)
|+.++++.+..
T Consensus 261 s~~~~~~~l~~ 271 (273)
T cd05074 261 SFQHLRDQLEL 271 (273)
T ss_pred CHHHHHHHHHh
Confidence 99999998764
No 320
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=3e-32 Score=297.87 Aligned_cols=252 Identities=30% Similarity=0.435 Sum_probs=199.2
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|++|.||++.+. +..+++|..... .......+.+ .+|++++.+++|||++++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLE--KIKEEALKSI----MQEIDLLKNLKHPNIVKYIGSIETSD-- 72 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccc--ccCHHHHHHH----HHHHHHHHhCCCCCccEEEEEEEeCC--
Confidence 4889999999999999999874 556788875433 2222333334 89999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.||+||||||+||+++.+
T Consensus 73 ------------~~~~v~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~ 135 (254)
T cd06627 73 ------------SLYIILEYAENGSLRQIIKK-----FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKD 135 (254)
T ss_pred ------------EEEEEEecCCCCcHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCC
Confidence 34999999999999999876 2468999999999999999999999999999999999999876
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+........ ......++..|+|||...+ ..++.++||||+|+++|+|++
T Consensus 136 -------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~y~~pe~~~~----~~~~~~~Dv~~lG~~l~~l~~ 194 (254)
T cd06627 136 -------GVVKLADFGVATKLNDVSK----------DDASVVGTPYWMAPEVIEM----SGASTASDIWSLGCTVIELLT 194 (254)
T ss_pred -------CCEEEeccccceecCCCcc----------cccccccchhhcCHhhhcC----CCCCcchhHHHHHHHHHHHHh
Confidence 7899999999976543211 1123457889999999865 347789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|..||...........+.....+..+ ...+..+.+++.+||..+|++|||+.+
T Consensus 195 g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~R~~~~~ 247 (254)
T cd06627 195 GNPPYYDLNPMAALFRIVQDDHPPLP---------------------------EGISPELKDFLMQCFQKDPNLRPTAKQ 247 (254)
T ss_pred CCCCCCCccHHHHHHHHhccCCCCCC---------------------------CCCCHHHHHHHHHHHhCChhhCcCHHH
Confidence 99999765543333332222111111 134567899999999999999999999
Q ss_pred HHHHHHh
Q 001142 1126 LYEMFVA 1132 (1142)
Q Consensus 1126 VL~~L~~ 1132 (1142)
++.++|+
T Consensus 248 ~l~~~~~ 254 (254)
T cd06627 248 LLKHPWI 254 (254)
T ss_pred HhcCCCC
Confidence 9998875
No 321
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=6.9e-34 Score=304.89 Aligned_cols=299 Identities=19% Similarity=0.252 Sum_probs=214.5
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
..+..|+....||+|+||.||+|... ...+|+|.++..+... .+.....+|+.+++.++|||||.+..
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~t------GiS~SAcREiaL~REl~h~nvi~Lv~ 94 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGT------GISMSACREIALLRELKHPNVISLVK 94 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCC------CcCHHHHHHHHHHHHhcCCcchhHHH
Confidence 34567999999999999999999642 2255666544332211 22233469999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
++...+ ...++++||.+ .+|...|+-++......++...++.|+.||+.|+.|||++=|+||||||
T Consensus 95 Vfl~~d-------------~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKP 160 (438)
T KOG0666|consen 95 VFLSHD-------------KKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKP 160 (438)
T ss_pred HHhccC-------------ceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCc
Confidence 887522 24699999998 8999999877666667899999999999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
.||||..++. .+|.|||+|||+++.+........ ..+..+.|..|+|||.+.+ ...|++++||||.|
T Consensus 161 aNIlvmgdgp---erG~VKIaDlGlaR~~~~plkpl~-------s~d~VVVTiWYRAPELLLG---a~hYT~AiDvWAiG 227 (438)
T KOG0666|consen 161 ANILVMGDGP---ERGRVKIADLGLARLFNNPLKPLA-------SLDPVVVTIWYRAPELLLG---ARHYTKAIDVWAIG 227 (438)
T ss_pred ceEEEeccCC---ccCeeEeecccHHHHhhccccccc-------cCCceEEEEEecChHHhcc---cccccchhhhHHHH
Confidence 9999987743 358999999999998776554321 2345678999999999998 45799999999999
Q ss_pred HHHHHHHhCCCCCCCCCH---------HHHHHHHHhCCCCCchhHHhhhcccccccc--cccC-CCCCC---chh---hh
Q 001142 1038 CLLLELLTLQVPYMGLSE---------LEIHDLIQMGKRPRLTDELEALGSCHEHEV--AQSG-SGFEK---PEA---EL 1099 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~~~---------~el~~~I~~~~~p~l~~~l~~~~~~~~~~~--~~~~-~~~~~---~~~---~~ 1099 (1142)
||+.||+|-.+.|.+... .+..+.|......+....++......+... .... ..+.. ... ..
T Consensus 228 CIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k 307 (438)
T KOG0666|consen 228 CIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHK 307 (438)
T ss_pred HHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhc
Confidence 999999999888865221 122333422221111112222211111100 0000 00000 000 00
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1100 ETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1100 ~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
..++...+|+.+||++||.+|.|++++++|++|...
T Consensus 308 ~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d 343 (438)
T KOG0666|consen 308 VKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED 343 (438)
T ss_pred CCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence 123447899999999999999999999999999876
No 322
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=2.7e-32 Score=309.97 Aligned_cols=291 Identities=19% Similarity=0.214 Sum_probs=202.1
Q ss_pred cceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
|.+++.+|.|+++.||++...+..+|+|+..... ......+.+ .+|+.++++++||||+++++++.+.+.
T Consensus 4 ~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~~----~~Ei~~l~~l~h~~i~~~~~~~~~~~~---- 73 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDS--CSKEDLKLL----QQEIITSRQLQHPNILPYVTSFIVDSE---- 73 (314)
T ss_pred hhhhHhhcCCceEEEEEecCCCCEEEEEEEeccc--cchhHHHHH----HHHHHHHHhcCCcchhhhhheeecCCe----
Confidence 4566667777777777777778889999865431 122333334 799999999999999999999886553
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
.+++|||+++++|.+++.... ...+++..+..++.|++.||+|||+++|+||||||+||+++.+
T Consensus 74 ----------~~~~~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~--- 137 (314)
T cd08216 74 ----------LYVVSPLMAYGSCEDLLKTHF---PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGD--- 137 (314)
T ss_pred ----------EEEEEeccCCCCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecC---
Confidence 499999999999999998632 2358899999999999999999999999999999999999877
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1048 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~ 1048 (1142)
+.+||+|||.+........... ..........++..|+|||++.... ..++.++|||||||++|||++|+.
T Consensus 138 ----~~~kl~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~~Diws~G~il~el~~g~~ 208 (314)
T cd08216 138 ----GKVVLSGLRYSVSMIKHGKRQR---VVHDFPKSSVKNLPWLSPEVLQQNL--QGYNEKSDIYSVGITACELANGHV 208 (314)
T ss_pred ----CceEEecCccceeecccccccc---ccccccccccccccccCHHHhcCCC--CCCCcchhHHHHHHHHHHHHhCCC
Confidence 7899999999875532211100 0011122345788899999986521 347889999999999999999999
Q ss_pred CCCCCCHHHHH-HHHHhCCCCCchhHH--hhhccccccc---ccccCCCC-CCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1049 PYMGLSELEIH-DLIQMGKRPRLTDEL--EALGSCHEHE---VAQSGSGF-EKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1049 Pf~~~~~~el~-~~I~~~~~p~l~~~l--~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
||......... +.+. +..+.+.... .......... ........ .........+..+.+++.+||+.||++||
T Consensus 209 pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 287 (314)
T cd08216 209 PFKDMPATQMLLEKVR-GTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRP 287 (314)
T ss_pred CCCCCCHHHHHHHHHh-ccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCc
Confidence 99875544332 2222 1111110000 0000000000 00000000 00011124467789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.++++|+|++..
T Consensus 288 t~~~ll~~p~~~~~ 301 (314)
T cd08216 288 SASQLLNHSFFKQC 301 (314)
T ss_pred CHHHHhcCchHhhh
Confidence 99999999999854
No 323
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-34 Score=332.52 Aligned_cols=260 Identities=22% Similarity=0.387 Sum_probs=216.1
Q ss_pred CCcceeeeecccCceEEEEEEE---CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF---GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~---~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
....+.++||.|-||.|++|+. ....+.|+||.++... ...+..+| +.|+.||.++.||||+++.|++....
T Consensus 629 s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdF----L~EAsIMGQFdHPNIIrLEGVVTks~ 703 (996)
T KOG0196|consen 629 SCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDF----LSEASIMGQFDHPNIIRLEGVVTKSK 703 (996)
T ss_pred hheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhh----hhhhhhcccCCCCcEEEEEEEEecCc
Confidence 3458999999999999999997 3455666666676532 34455566 99999999999999999999998665
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. +||+|||++|+|+.+++.. +..|++.+..-|+++|+.|+.||-+.++|||||-+.|||++
T Consensus 704 Pv--------------MIiTEyMENGsLDsFLR~~----DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVN 765 (996)
T KOG0196|consen 704 PV--------------MIITEYMENGSLDSFLRQN----DGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVN 765 (996)
T ss_pred ee--------------EEEhhhhhCCcHHHHHhhc----CCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeec
Confidence 43 9999999999999999872 35699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ -.+|++|||+++.+.+.......+.++ --...|.|||.+.. ..++.++||||||+++||.
T Consensus 766 sn-------LvCKVsDFGLSRvledd~~~~ytt~GG-------KIPiRWTAPEAIa~----RKFTsASDVWSyGIVmWEV 827 (996)
T KOG0196|consen 766 SN-------LVCKVSDFGLSRVLEDDPEAAYTTLGG-------KIPIRWTAPEAIAY----RKFTSASDVWSYGIVMWEV 827 (996)
T ss_pred cc-------eEEEeccccceeecccCCCccccccCC-------ccceeecChhHhhh----cccCchhhccccceEEEEe
Confidence 88 899999999999776543222111111 12357999999986 6789999999999999998
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |..||.+.+..+++..|..+.+.+.+ .+++..|.+|+..||++|-.+||.
T Consensus 828 mSyGERPYWdmSNQdVIkaIe~gyRLPpP---------------------------mDCP~aL~qLMldCWqkdR~~RP~ 880 (996)
T KOG0196|consen 828 MSYGERPYWDMSNQDVIKAIEQGYRLPPP---------------------------MDCPAALYQLMLDCWQKDRNRRPK 880 (996)
T ss_pred cccCCCcccccchHHHHHHHHhccCCCCC---------------------------CCCcHHHHHHHHHHHHHHhhcCCC
Confidence 87 99999999999999999887654322 278888999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001142 1123 AGDLYEMFVART 1134 (1142)
Q Consensus 1123 a~EVL~~L~~~~ 1134 (1142)
+.||+.+|-+..
T Consensus 881 F~qiV~~lDklI 892 (996)
T KOG0196|consen 881 FAQIVSTLDKLI 892 (996)
T ss_pred HHHHHHHHHHHh
Confidence 999999887643
No 324
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.3e-32 Score=315.51 Aligned_cols=285 Identities=20% Similarity=0.214 Sum_probs=201.7
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|.+.+.||+|+||.||+|.+ .+..+|+|+..... .... +...+.+|+.++++++||||+++++++.....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 88 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF--QSEI----FAKRAYRELTLLKHMQHENVIGLLDVFTSAVS 88 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc--cccc----chhHHHHHHHHHHhcCCCCccchhheeccccc
Confidence 4789999999999999999987 46678888653221 1111 11223789999999999999999999875432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ......++||||+. .+|..++. ..+++..+..++.|++.||+|||++||+||||||+||+++.
T Consensus 89 ~--------~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~ 152 (342)
T cd07879 89 G--------DEFQDFYLVMPYMQ-TDLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE 152 (342)
T ss_pred C--------CCCceEEEEecccc-cCHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence 1 12235699999996 57766542 35899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++..... .....+++.|+|||++.+ ...++.++|||||||++|||+
T Consensus 153 ~-------~~~kL~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slGvil~el~ 209 (342)
T cd07879 153 D-------CELKILDFGLARHADAE-------------MTGYVVTRWYRAPEVILN---WMHYNQTVDIWSVGCIMAEML 209 (342)
T ss_pred C-------CCEEEeeCCCCcCCCCC-------------CCCceeeecccChhhhcC---ccccCchHHHHHHHHHHHHHH
Confidence 7 78999999998653221 112357889999999864 235788999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchh---hhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA---ELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||.+.+.......+........+.......................... ....++.+.+++.+||+.||.+||
T Consensus 210 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~ 289 (342)
T cd07879 210 TGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRL 289 (342)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCc
Confidence 99999988765555444433222221111111100000000000000000000 013456789999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001142 1122 TAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ss 1136 (1142)
++.+++.|+|+..--
T Consensus 290 ~~~e~l~h~~f~~~~ 304 (342)
T cd07879 290 TATEALEHPYFDSFR 304 (342)
T ss_pred CHHHHhcCcchhhcc
Confidence 999999999997643
No 325
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2e-32 Score=301.97 Aligned_cols=250 Identities=23% Similarity=0.274 Sum_probs=191.0
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHH-hhCCCCCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRML-GALRHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL-~~L~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.||+|+||.||+|.+ .+..+|+|+...... ........ +..|..++ ....||||+++++++...+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~-~~~~~~~~----~~~e~~~~~~~~~~~~i~~~~~~~~~~~------ 70 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDM-IAKNQVTN----VKAERAIMMIQGESPYVAKLYYSFQSKD------ 70 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhh-hHHHHHHH----HHHHHHHHhhcCCCCCeeeeeeeEEcCC------
Confidence 5799999999999988 456788887532110 01111111 24555544 4458999999999998654
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
..++||||+++++|.++++. ...+++..+..++.||+.||.|||+.+|+||||+|+||+++.+
T Consensus 71 --------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~---- 133 (260)
T cd05611 71 --------YLYLVMEYLNGGDCASLIKT-----LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT---- 133 (260)
T ss_pred --------eEEEEEeccCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC----
Confidence 34999999999999999975 2468999999999999999999999999999999999999876
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
+.++|+|||.+..... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|..|
T Consensus 134 ---~~~~l~dfg~~~~~~~--------------~~~~~~~~~y~~pe~~~~----~~~~~~~Dv~slG~il~~l~~g~~p 192 (260)
T cd05611 134 ---GHLKLTDFGLSRNGLE--------------NKKFVGTPDYLAPETILG----VGDDKMSDWWSLGCVIFEFLFGYPP 192 (260)
T ss_pred ---CcEEEeecccceeccc--------------cccCCCCcCccChhhhcC----CCCcchhhhHHHHHHHHHHHHCCCC
Confidence 7899999998864322 113357889999999875 3478999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC---HHHH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT---AGDL 1126 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS---a~EV 1126 (1142)
|......+....+....... +. ......++.+.+++.+||+.||++||+ ++|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~-~~-----------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 193 FHAETPDAVFDNILSRRINW-PE-----------------------EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred CCCCCHHHHHHHHHhcccCC-CC-----------------------cccccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 98776666555543322110 00 000134567999999999999999995 5799
Q ss_pred HHHHHhhcC
Q 001142 1127 YEMFVARTS 1135 (1142)
Q Consensus 1127 L~~L~~~~s 1135 (1142)
+.|+|++..
T Consensus 249 l~~~~~~~~ 257 (260)
T cd05611 249 KSHPFFKSI 257 (260)
T ss_pred HcChHhhcC
Confidence 999999754
No 326
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=9.8e-33 Score=304.88 Aligned_cols=246 Identities=22% Similarity=0.382 Sum_probs=181.2
Q ss_pred eeecccCceEEEEEEECCc---------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 813 DEAGKSVSSSLFRCKFGSA---------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~~---------~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+.||+|+||.||+|.+... .+++|+.. .. .....+ .+..|+.+++.+.||||+++++++....
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~--~~--~~~~~~----~~~~e~~~l~~~~h~~iv~~~~~~~~~~ 72 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLD--KS--HRNYSE----SFFEAASMMSQLSHKHLVLNYGVCVCGD 72 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhc--ch--hHHHHH----HHHHHHHHHHhCCCCChhheeeEEEeCC
Confidence 4799999999999987321 24444421 11 111122 3368999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++||||+++|+|.++++.. ...+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 73 ~--------------~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~ 134 (258)
T cd05078 73 E--------------SIMVQEYVKFGSLDTYLKKN----KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLI 134 (258)
T ss_pred C--------------cEEEEecCCCCcHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEe
Confidence 3 38999999999999998751 23589999999999999999999999999999999999998
Q ss_pred ccccc-CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 964 LERKK-ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 964 ~~~~~-~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
.++.. ....+.++++|||.+..... .....+++.|+|||++.+ ...++.++||||||+++|+
T Consensus 135 ~~~~~~~~~~~~~~l~d~g~~~~~~~--------------~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~~l~~ 197 (258)
T cd05078 135 REEDRKTGNPPFIKLSDPGISITVLP--------------KEILLERIPWVPPECIEN---PQNLSLAADKWSFGTTLWE 197 (258)
T ss_pred cccccccCCCceEEecccccccccCC--------------chhccccCCccCchhccC---CCCCCchhhHHHHHHHHHH
Confidence 76321 12234589999998854321 113457888999999875 2346789999999999999
Q ss_pred HHhC-CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTL-QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG-~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++| ..||.............. ...++ ......+.+++.+||+.||++||
T Consensus 198 l~~g~~~~~~~~~~~~~~~~~~~--~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp 248 (258)
T cd05078 198 IFSGGDKPLSALDSQKKLQFYED--RHQLP---------------------------APKWTELANLINQCMDYEPDFRP 248 (258)
T ss_pred HHcCCCCChhhccHHHHHHHHHc--cccCC---------------------------CCCcHHHHHHHHHHhccChhhCC
Confidence 9998 466655443332221111 11100 02234689999999999999999
Q ss_pred CHHHHHHHH
Q 001142 1122 TAGDLYEMF 1130 (1142)
Q Consensus 1122 Sa~EVL~~L 1130 (1142)
|++++++.+
T Consensus 249 s~~~il~~l 257 (258)
T cd05078 249 SFRAIIRDL 257 (258)
T ss_pred CHHHHHHhc
Confidence 999999875
No 327
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.6e-32 Score=299.92 Aligned_cols=245 Identities=23% Similarity=0.375 Sum_probs=182.6
Q ss_pred eeecccCceEEEEEEECCcc------------EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 813 DEAGKSVSSSLFRCKFGSAD------------AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~~~------------vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+.||+|+||.||+|.+.... +++|+.... ......+ .+|+.++++++||||+++++++.
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~ 71 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSD-----HRDSLAF----FETASLMSQLSHKHLVKLYGVCV 71 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccc-----hhhHHHH----HHHHHHHHcCCCcchhheeeEEe
Confidence 47999999999999985433 444443211 1112333 78999999999999999999887
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
. .. .++||||+++++|.+++... ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 72 ~-~~--------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Ni 132 (259)
T cd05037 72 R-DE--------------NIMVEEYVKFGPLDVFLHRE----KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNI 132 (259)
T ss_pred c-CC--------------cEEEEEcCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceE
Confidence 5 32 38999999999999999762 12689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+.........+||+|||++..... .....++..|+|||++.+.. ..++.++||||||+++
T Consensus 133 ll~~~~~~~~~~~~~kl~Dfg~a~~~~~--------------~~~~~~~~~y~aPE~~~~~~--~~~~~~~Di~slG~~~ 196 (259)
T cd05037 133 LVARYGLNEGYVPFIKLSDPGIPITVLS--------------REERVERIPWIAPECIRNGQ--ASLTIAADKWSFGTTL 196 (259)
T ss_pred EEecCccccCCceeEEeCCCCccccccc--------------ccccccCCCccChhhhcCCC--CCcchhhHHHHHHHHH
Confidence 9987632112234799999999875432 11234677899999987621 3678999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+|++ |..||......+........... .. .....+.+++.+||..+|.+
T Consensus 197 ~~l~~~~~~p~~~~~~~~~~~~~~~~~~~------------------------~~-----~~~~~~~~li~~~l~~~p~~ 247 (259)
T cd05037 197 LEICSNGEEPLSTLSSSEKERFYQDQHRL------------------------PM-----PDCAELANLINQCWTYDPTK 247 (259)
T ss_pred HHHHhCCCCCcccCCchhHHHHHhcCCCC------------------------CC-----CCchHHHHHHHHHhccChhh
Confidence 99999 57888765433322222111000 00 11256899999999999999
Q ss_pred CCCHHHHHHHH
Q 001142 1120 RPTAGDLYEMF 1130 (1142)
Q Consensus 1120 RPSa~EVL~~L 1130 (1142)
|||+.++++.+
T Consensus 248 Rpt~~~il~~l 258 (259)
T cd05037 248 RPSFRAILRDL 258 (259)
T ss_pred CCCHHHHHHhc
Confidence 99999999865
No 328
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.9e-32 Score=302.25 Aligned_cols=261 Identities=23% Similarity=0.341 Sum_probs=198.3
Q ss_pred CcceeeeecccCceEEEEEEECC---ccEEEEEEecccCCCCh--HHHHHhHHhHHHHHHHHhh-CCCCCccceeeeEec
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGS---ADAAAKVRTLKVCGSSA--DEIRNFEYSCLGEVRMLGA-LRHSCIVEMYGHKIS 881 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~---~~vAvKi~~l~~~~~~~--~~~~~~~~~~~~Ei~iL~~-L~HpNIVkl~g~~~~ 881 (1142)
.|++.+.||+|+||.||+|.+.. ..+++|........... .........+.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47889999999999999999844 66888875443221110 0011111223678888875 689999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCe
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENI 960 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NI 960 (1142)
.+ ..++||||+++++|.+++...... ...+++..++.++.|++.||.|||+ .+|+|+||||+||
T Consensus 81 ~~--------------~~~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~ni 145 (269)
T cd08528 81 ND--------------RLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNI 145 (269)
T ss_pred CC--------------eEEEEEecCCCCcHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHE
Confidence 54 349999999999999998754333 3568999999999999999999996 7899999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+++.+ +.++|+|||.+....... ......|+..|+|||.+.+ ..++.++||||||+++
T Consensus 146 l~~~~-------~~~~l~dfg~~~~~~~~~-----------~~~~~~~~~~~~~Pe~~~~----~~~~~~~Dv~slG~ll 203 (269)
T cd08528 146 MLGED-------DKVTITDFGLAKQKQPES-----------KLTSVVGTILYSCPEIVKN----EPYGEKADVWAFGCIL 203 (269)
T ss_pred EECCC-------CcEEEecccceeeccccc-----------ccccccCcccCcChhhhcC----CCCchHHHHHHHHHHH
Confidence 99887 789999999997543321 1123458889999999875 4578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|+.||...........+......... ....++.+.+++.+||+.||++|
T Consensus 204 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~cl~~~p~~R 257 (269)
T cd08528 204 YQMCTLQPPFYSTNMLSLATKIVEAVYEPLP--------------------------EGMYSEDVTDVITSCLTPDAEAR 257 (269)
T ss_pred HHHHhCCCcccccCHHHHHHHHhhccCCcCC--------------------------cccCCHHHHHHHHHHCCCCCccC
Confidence 9999999999876555544444332221110 01335679999999999999999
Q ss_pred CCHHHHHHHHH
Q 001142 1121 PTAGDLYEMFV 1131 (1142)
Q Consensus 1121 PSa~EVL~~L~ 1131 (1142)
|++.|+..++.
T Consensus 258 p~~~e~~~~~~ 268 (269)
T cd08528 258 PDIIQVSAMIS 268 (269)
T ss_pred CCHHHHHHHhc
Confidence 99999998763
No 329
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.8e-32 Score=305.60 Aligned_cols=282 Identities=22% Similarity=0.262 Sum_probs=200.6
Q ss_pred cceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|++.+.||+|+||.||+|.+. +..+++|+..... ........ +.+|+.++++++||||+++++++....
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 71 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPIT----AIREIKLLQKLRHPNIVRLKEIVTSKG--- 71 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHH----HHHHHHHHHhccCCCeeeheeeEecCC---
Confidence 678999999999999999985 4678888765432 11122223 368999999999999999999987641
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
....++||||++ ++|.+++.. ....+++..+..++.||+.||+|||++|++|+||||+||+++.+
T Consensus 72 ---------~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~- 136 (287)
T cd07840 72 ---------KGSIYMVFEYMD-HDLTGLLDS----PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINND- 136 (287)
T ss_pred ---------CCcEEEEecccc-ccHHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCC-
Confidence 114599999997 589888864 12468999999999999999999999999999999999999987
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++|+|||.+......... ......++..|+|||.+.+ ...++.++||||||+++|+|++|
T Consensus 137 ------~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~---~~~~~~~~Dv~slG~~l~el~t~ 198 (287)
T cd07840 137 ------GVLKLADFGLARPYTKRNSA---------DYTNRVITLWYRPPELLLG---ATRYGPEVDMWSVGCILAELFLG 198 (287)
T ss_pred ------CCEEEccccceeeccCCCcc---------cccccccccccCCceeeEc---cccCChHHHHHHHHHHHHHHHhC
Confidence 78999999999765432110 1112346788999998764 23578999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCC--Cchhhhh-hHHHHHHHHHHhcccCCCCCCCH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE--KPEAELE-TLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+.||...........+...........+................... ..+.... .+..+.+++.+||..+|.+||++
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~ 278 (287)
T cd07840 199 KPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISA 278 (287)
T ss_pred CCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCH
Confidence 99998776655554443222111111111000000000000000000 0000011 26779999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.++++++|+
T Consensus 279 ~~~l~~~~~ 287 (287)
T cd07840 279 DQALQHEYF 287 (287)
T ss_pred HHHhhCcCC
Confidence 999999985
No 330
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=8.4e-33 Score=304.63 Aligned_cols=251 Identities=26% Similarity=0.340 Sum_probs=197.9
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|+||.||+|.+. +..+++|+...+.. ......+. +.+|++++++++||||+++++.+.+..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 73 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC-VEKGSVRN----VLNERRILQELNHPFLVNLWYSFQDEE-- 73 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhh-cchhHHHH----HHHHHHHHHhCCCCChHHHHHhhcCCC--
Confidence 4889999999999999999984 67788887643221 11122233 478999999999999999999887544
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+|+||+|+||+++.+
T Consensus 74 ------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~ 136 (258)
T cd05578 74 ------------NMYLVVDLLLGGDLRYHLSQ-----KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQ 136 (258)
T ss_pred ------------eEEEEEeCCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCC
Confidence 45999999999999999876 2468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+....... ......|+..|+|||.+.. ..++.++||||||+++|+|++
T Consensus 137 -------~~~~l~d~~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~~l~~l~~ 194 (258)
T cd05578 137 -------GHVHITDFNIATKVTPDT-----------LTTSTSGTPGYMAPEVLCR----QGYSVAVDWWSLGVTAYECLR 194 (258)
T ss_pred -------CCEEEeecccccccCCCc-----------cccccCCChhhcCHHHHcc----cCCCCcccchhhHHHHHHHHh
Confidence 789999999987543321 1123457889999999875 447899999999999999999
Q ss_pred CCCCCCCCCH---HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1046 LQVPYMGLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1046 G~~Pf~~~~~---~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|..||..... ......... ..+.. ....+..+.+++.+||+.||.+||+
T Consensus 195 g~~p~~~~~~~~~~~~~~~~~~-~~~~~---------------------------~~~~~~~~~~~i~~~l~~~p~~R~~ 246 (258)
T cd05578 195 GKRPYRGHSRTIRDQIRAKQET-ADVLY---------------------------PATWSTEAIDAINKLLERDPQKRLG 246 (258)
T ss_pred CCCCCCCCCccHHHHHHHHhcc-ccccC---------------------------cccCcHHHHHHHHHHccCChhHcCC
Confidence 9999986553 222222111 11110 0134567999999999999999999
Q ss_pred H--HHHHHHHHh
Q 001142 1123 A--GDLYEMFVA 1132 (1142)
Q Consensus 1123 a--~EVL~~L~~ 1132 (1142)
+ .|+++|+|+
T Consensus 247 ~~~~~l~~~~~~ 258 (258)
T cd05578 247 DNLKDLKNHPYF 258 (258)
T ss_pred ccHHHHhcCCCC
Confidence 9 999999885
No 331
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.7e-32 Score=313.25 Aligned_cols=285 Identities=20% Similarity=0.209 Sum_probs=202.8
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|.+ .+..+|+|+.... ....... ..+.+|+.++++++||||+++++++.....
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRP--FQSELFA----KRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccc--ccchHHH----HHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 4699999999999999999987 4566777764322 1111222 234789999999999999999999875432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ......++||||+ +++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 89 ~--------~~~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~ 153 (343)
T cd07880 89 L--------DRFHDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE 153 (343)
T ss_pred c--------cccceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence 2 1223468999999 6899888753 36899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.++|+|||++...... .....+++.|+|||.+.+ ...++.++||||||+++|+|+
T Consensus 154 ~-------~~~kl~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~ll~~l~ 210 (343)
T cd07880 154 D-------CELKILDFGLARQTDSE-------------MTGYVVTRWYRAPEVILN---WMHYTQTVDIWSVGCIMAEML 210 (343)
T ss_pred C-------CCEEEeecccccccccC-------------ccccccCCcccCHHHHhC---CCCCCcHHHHHHHHHHHHHHH
Confidence 7 78999999998654321 112357889999999864 134778999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCC---chhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK---PEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|..||.+.........+................................ .......++.+.+++.+||+.||.+||
T Consensus 211 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~ 290 (343)
T cd07880 211 TGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRI 290 (343)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCC
Confidence 99999987665444433322221111111110000000000000000000 011124566789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.+++.|+|++..
T Consensus 291 t~~~~l~~~~~~~~ 304 (343)
T cd07880 291 TAAEALAHPYFEEF 304 (343)
T ss_pred CHHHHhcCccHhhh
Confidence 99999999999864
No 332
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.8e-32 Score=314.93 Aligned_cols=299 Identities=17% Similarity=0.203 Sum_probs=203.2
Q ss_pred CCcc-eeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChH------HHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 807 PSLS-SCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSAD------EIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 807 ~~y~-l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~------~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
.+|. +.+.||+|+||+||+|.+ .+..+|+|+.+......... ....+...+.+|+.++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4564 567899999999999986 46678888764332211000 00011123478999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
++...+. .++||||++ ++|.+++.. ...+++..+..++.|++.||+|||++||+||||||
T Consensus 88 ~~~~~~~--------------~~lv~e~~~-~~l~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~ 147 (335)
T PTZ00024 88 VYVEGDF--------------INLVMDIMA-SDLKKVVDR-----KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSP 147 (335)
T ss_pred EEecCCc--------------EEEEEeccc-cCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccH
Confidence 9876553 499999997 799998865 34689999999999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCccccccccccccccc----CCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH----RGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1033 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~----~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1033 (1142)
+||+++.+ +.++|+|||.+.............. ..........+++.|+|||.+.+ ...++.++||
T Consensus 148 ~nill~~~-------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv 217 (335)
T PTZ00024 148 ANIFINSK-------GICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG---AEKYHFAVDM 217 (335)
T ss_pred HHeEECCC-------CCEEECCccceeecccccccccccccccccccccccccccccCCCCChhccc---CCCCCcHHHH
Confidence 99999877 7899999999976541110000000 00011122346889999999865 2346899999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1034 WSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1034 wSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
|||||++|+|++|+.||.+.+..+....+...........+...........................++.+.+++.+||
T Consensus 218 ~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 297 (335)
T PTZ00024 218 WSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLL 297 (335)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHc
Confidence 99999999999999999877766554444221111111000000000000000000000000011134567899999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhcC
Q 001142 1114 EENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+.||++|||++|++.|+|++..
T Consensus 298 ~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 298 KLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred CCCchhccCHHHHhcCcccCCC
Confidence 9999999999999999999865
No 333
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=4.2e-32 Score=313.95 Aligned_cols=284 Identities=19% Similarity=0.232 Sum_probs=201.0
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|.. .+..+|+|+.. .........+ .+.+|+.++++++||||+++++++.....
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~--~~~~~~~~~~----~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~ 90 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAK----RTYRELRLLKHMKHENVIGLLDVFTPARS 90 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEec--CcchhhHHHH----HHHHHHHHHHHcCCCcccceeeeeeeccc
Confidence 6799999999999999999986 45567777543 2111112222 23689999999999999999998865432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ......+++++++ +++|.++++. ..+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 91 ~--------~~~~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~ 155 (345)
T cd07877 91 L--------EEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 155 (345)
T ss_pred c--------cccccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC
Confidence 1 1122458899987 6899888764 35899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++...... .....++..|+|||.+.+ ...++.++|||||||++|+|+
T Consensus 156 ~-------~~~kl~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~---~~~~~~~~DvwslG~il~el~ 212 (345)
T cd07877 156 D-------CELKILDFGLARHTDDE-------------MTGYVATRWYRAPEIMLN---WMHYNQTVDIWSVGCIMAELL 212 (345)
T ss_pred C-------CCEEEeccccccccccc-------------ccccccCCCccCHHHHhC---ccCCCchhhHHHHHHHHHHHH
Confidence 7 78999999998653221 112357889999999764 235778999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccccccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||...........+........+...............+. .......+.....++.+.++|.+||+.||.+||
T Consensus 213 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 292 (345)
T cd07877 213 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 292 (345)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcC
Confidence 99999987665554444432222111111111100000000000 000000011113456789999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001142 1122 TAGDLYEMFVART 1134 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ 1134 (1142)
++.+++.|+|+..
T Consensus 293 t~~e~l~h~~f~~ 305 (345)
T cd07877 293 TAAQALAHAYFAQ 305 (345)
T ss_pred CHHHHhcChhhhh
Confidence 9999999999974
No 334
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.8e-32 Score=305.99 Aligned_cols=254 Identities=24% Similarity=0.321 Sum_probs=191.7
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 815 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 815 LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
||+|+||+||+|.+. +..+++|+...... ... .....+..|+.++++++||||+++++.+...+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~--~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------- 66 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRL--KKR---KGEQMALNEKKILEKVSSRFIVSLAYAFETKD--------- 66 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhh--hhh---hhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC---------
Confidence 699999999999874 66778877542211 111 11223368999999999999999999987654
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 972 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~ 972 (1142)
..|+||||+++++|.+++... ....+++..+..++.|++.||.|||+.||+||||+|+||+++.+
T Consensus 67 -----~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~------- 131 (277)
T cd05577 67 -----DLCLVMTLMNGGDLKYHIYNV---GEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDH------- 131 (277)
T ss_pred -----eEEEEEecCCCCcHHHHHHHc---CcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC-------
Confidence 349999999999999998762 22468999999999999999999999999999999999999887
Q ss_pred CeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001142 973 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1052 (1142)
Q Consensus 973 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~ 1052 (1142)
+.++|+|||.+....... ......++..|+|||++.+ ..++.++||||||+++|+|++|+.||..
T Consensus 132 ~~~~l~dfg~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~~~ 196 (277)
T cd05577 132 GNVRISDLGLAVELKGGK-----------KIKGRAGTPGYMAPEVLQG----EVYDFSVDWFALGCTLYEMIAGRSPFRQ 196 (277)
T ss_pred CCEEEccCcchhhhccCC-----------ccccccCCCCcCCHHHhcC----CCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 789999999986543211 1123357889999999875 4478899999999999999999999976
Q ss_pred CCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHHHHH
Q 001142 1053 LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAGDLY 1127 (1142)
Q Consensus 1053 ~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-----Sa~EVL 1127 (1142)
.........+....... . . ......++.+.+++.+||+.||.+|| ++.+++
T Consensus 197 ~~~~~~~~~~~~~~~~~-~------------------~-----~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 252 (277)
T cd05577 197 RKEKVEKEELKRRTLEM-A------------------V-----EYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVR 252 (277)
T ss_pred CcccccHHHHHhccccc-c------------------c-----cCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHH
Confidence 43311111111111000 0 0 00013456789999999999999999 899999
Q ss_pred HHHHhhcCC
Q 001142 1128 EMFVARTSS 1136 (1142)
Q Consensus 1128 ~~L~~~~ss 1136 (1142)
.|+|+..-.
T Consensus 253 ~h~~~~~~~ 261 (277)
T cd05577 253 EHPLFKDLN 261 (277)
T ss_pred hChhhhcCC
Confidence 999996543
No 335
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5.6e-32 Score=308.77 Aligned_cols=259 Identities=26% Similarity=0.401 Sum_probs=199.5
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|...+.||+|+||.||+|++. +..+++|+..... ......... +.+|++++++++|||++++++++.+...
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~-~~~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~~~- 99 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSG-KQSNEKWQD----IIKEVKFLQRIKHPNSIEYKGCYLREHT- 99 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCC-CCchHHHHH----HHHHHHHHHhCCCCCEEEEEEEEeeCCe-
Confidence 3788999999999999999974 5567777643221 111222223 4789999999999999999999886543
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.++||||++ |+|.+++... ..++++..+..++.||+.||.|||++||+||||+|+||+++.+
T Consensus 100 -------------~~lv~e~~~-g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~ 161 (317)
T cd06635 100 -------------AWLVMEYCL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP 161 (317)
T ss_pred -------------EEEEEeCCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCC
Confidence 499999997 6888877541 3468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++..... .....|++.|+|||++.... ...++.++|||||||++|+|++
T Consensus 162 -------~~~kl~dfg~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~-~~~~~~~~Dv~slGvil~el~~ 219 (317)
T cd06635 162 -------GQVKLADFGSASIASP--------------ANSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAE 219 (317)
T ss_pred -------CCEEEecCCCccccCC--------------cccccCCccccChhhhhcCC-CCCCCccccHHHHHHHHHHHHh
Confidence 7899999998854322 11235788999999975321 2457889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||...........+.....+... ....++.+.+++.+||+.+|.+||++.+
T Consensus 220 g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 273 (317)
T cd06635 220 RKPPLFNMNAMSALYHIAQNESPTLQ--------------------------SNEWSDYFRNFVDSCLQKIPQDRPTSEE 273 (317)
T ss_pred CCCCCCCccHHHHHHHHHhccCCCCC--------------------------CccccHHHHHHHHHHccCCcccCcCHHH
Confidence 99999876555544444333221111 0134556899999999999999999999
Q ss_pred HHHHHHhhcCCCC
Q 001142 1126 LYEMFVARTSSSI 1138 (1142)
Q Consensus 1126 VL~~L~~~~ss~~ 1138 (1142)
+++|+|+......
T Consensus 274 il~~~~~~~~~~~ 286 (317)
T cd06635 274 LLKHMFVLRERPE 286 (317)
T ss_pred HHhChhhhccCcc
Confidence 9999998765543
No 336
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=2.5e-32 Score=307.90 Aligned_cols=293 Identities=20% Similarity=0.190 Sum_probs=201.6
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||.||+|.+. +..+++|+.+...... ... ..+.+|++++++++||||+++++++.+..
T Consensus 6 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--~~~----~~~~~e~~~~~~l~h~~i~~~~~~~~~~~ 79 (302)
T cd07864 6 VDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE--GFP----ITAIREIKILRQLNHRNIVNLKEIVTDKQ 79 (302)
T ss_pred hhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc--Cch----HHHHHHHHHHHhCCCCCeeeeeheecCcc
Confidence 567999999999999999999984 5677888765432211 111 22368999999999999999999987643
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.... ........++||||++ +++...+.. ....+++..+..++.||+.||+|||+.||+|+||||+||+++
T Consensus 80 ~~~~----~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~ 150 (302)
T cd07864 80 DALD----FKKDKGAFYLVFEYMD-HDLMGLLES----GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN 150 (302)
T ss_pred hhhh----ccccCCcEEEEEcccC-ccHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 1000 0011225799999998 477777654 134689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||.+......... ......++..|+|||.+.+ ...++.++|||||||++|+|
T Consensus 151 ~~-------~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~---~~~~~~~~Di~slG~~~~el 211 (302)
T cd07864 151 NK-------GQIKLADFGLARLYNSEESR---------PYTNKVITLWYRPPELLLG---EERYGPAIDVWSCGCILGEL 211 (302)
T ss_pred CC-------CcEEeCcccccccccCCccc---------ccccceeccCccChHHhcC---CCCCCchhHHHHHHHHHHHH
Confidence 87 78999999998765432110 1112246778999998864 23467899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccccccc--ccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVA--QSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
++|++||......+....+........+..+............ +..............+..+.+++.+||+.||.+||
T Consensus 212 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 291 (302)
T cd07864 212 FTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRC 291 (302)
T ss_pred HhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCC
Confidence 9999999876655544444332111111111110000000000 00000000000013467799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001142 1122 TAGDLYEMFVA 1132 (1142)
Q Consensus 1122 Sa~EVL~~L~~ 1132 (1142)
++.+++.|+|+
T Consensus 292 ~~~~il~~~~~ 302 (302)
T cd07864 292 TAEEALNSPWL 302 (302)
T ss_pred CHHHHhcCCCC
Confidence 99999999885
No 337
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.8e-32 Score=313.76 Aligned_cols=297 Identities=22% Similarity=0.249 Sum_probs=202.9
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|... +..+++|....+.. ...+.+ .+|++++++++||||+++++++.....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~----~~~~~~----~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 76 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP----QSVKHA----LREIKIIRRLDHDNIVKVYEVLGPSGS 76 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC----chHHHH----HHHHHHHHhcCCCcchhhHhhhccccc
Confidence 57999999999999999999884 55677776543321 222233 689999999999999999988765331
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
....+-.........++||||++ ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~ 149 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ------GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT 149 (342)
T ss_pred ccccccccccccceEEEEeeccc-ccHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC
Confidence 10000001112335799999997 688887753 35899999999999999999999999999999999999975
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
++ ..++|+|||.+......... ........++..|+|||.+.. ...++.++|||||||++|+|+
T Consensus 150 ~~------~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwSlGvil~el~ 213 (342)
T cd07854 150 ED------LVLKIGDFGLARIVDPHYSH-------KGYLSEGLVTKWYRSPRLLLS---PNNYTKAIDMWAAGCIFAEML 213 (342)
T ss_pred CC------ceEEECCcccceecCCcccc-------ccccccccccccccCHHHHhC---ccccCchhhHHHHHHHHHHHH
Confidence 42 57999999998754322111 001112357889999998754 245788999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCC--CCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSG--FEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
+|+.||.+....+....+........................+.... ..........+.++.+++.+||+.||.+|||
T Consensus 214 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 293 (342)
T cd07854 214 TGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLT 293 (342)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccC
Confidence 99999987766555444432221111111100000000000000000 0000011135567899999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001142 1123 AGDLYEMFVART 1134 (1142)
Q Consensus 1123 a~EVL~~L~~~~ 1134 (1142)
+.+++.|+|++.
T Consensus 294 ~~ell~h~~~~~ 305 (342)
T cd07854 294 AEEALMHPYMSC 305 (342)
T ss_pred HHHHhCCCcccc
Confidence 999999999973
No 338
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.2e-32 Score=303.71 Aligned_cols=263 Identities=24% Similarity=0.313 Sum_probs=202.6
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~ 883 (1142)
++|.+.+.||+|++|.||+|.. .+..+++|+...... ......+ .+.+|+.+++++. ||||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~-~~~~~~~----~~~~e~~~~~~l~~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQL-IKEKKVK----YVKIEKEVLTRLNGHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhc-cchHHHH----HHHHHHHHHHhcccCCCchhHHHHhcCCc
Confidence 3689999999999999999998 567788887643211 1112122 3478999999998 999999999887654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.+ ...+++..+..|+.|++.||.|||+.|++|+||+|+||+++
T Consensus 76 --------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~ 136 (280)
T cd05581 76 --------------NLYFVLEYAPNGELLQYIRK-----YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD 136 (280)
T ss_pred --------------eEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC
Confidence 34999999999999999976 23699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccc----------cccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCC----------IAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1033 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~----------~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1033 (1142)
.+ +.++|+|||++........... .............++..|+|||+... ..++.++||
T Consensus 137 ~~-------~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----~~~~~~~Di 205 (280)
T cd05581 137 KD-------MHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE----KPAGKSSDL 205 (280)
T ss_pred CC-------CCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC----CCCChhhhH
Confidence 77 7899999999976543221000 00001112234568899999999875 457889999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1034 WSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1034 wSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
||||++++++++|..||...........+...... .+ ...++.+.+++.+||
T Consensus 206 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~l 257 (280)
T cd05581 206 WALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYS-FP---------------------------PNFPPDAKDLIEKLL 257 (280)
T ss_pred HHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCC-CC---------------------------CccCHHHHHHHHHHh
Confidence 99999999999999999876654444443321110 00 033556899999999
Q ss_pred ccCCCCCCCH----HHHHHHHHh
Q 001142 1114 EENPTERPTA----GDLYEMFVA 1132 (1142)
Q Consensus 1114 ~~DP~~RPSa----~EVL~~L~~ 1132 (1142)
+.||.+||++ +++++|+|+
T Consensus 258 ~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 258 VLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred cCCHhhCCCcccCHHHHhcCCCC
Confidence 9999999999 999999985
No 339
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=6.5e-32 Score=310.26 Aligned_cols=288 Identities=19% Similarity=0.234 Sum_probs=200.7
Q ss_pred CcceeeeecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 882 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~ 882 (1142)
+|++.+.||+|+||.||++++. +..+|+|..... .......+. +.+|+.+++++ +||||++++++....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~----~~~E~~~l~~l~~h~~iv~~~~~~~~~ 74 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNV--FSKKILAKR----ALRELKLLRHFRGHKNITCLYDMDIVF 74 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccc--cccchhHHH----HHHHHHHHHHhcCCCChheeeeeeeec
Confidence 4789999999999999999985 446777764322 111122222 36899999999 599999999875432
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ......+++|||+. ++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 75 ~----------~~~~~~~~~~e~~~-~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili 138 (332)
T cd07857 75 P----------GNFNELYLYEELME-ADLHQIIRS-----GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV 138 (332)
T ss_pred c----------ccCCcEEEEEeccc-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE
Confidence 1 01224589999996 799988864 3468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||.+......... .........||+.|+|||++.+ ...++.++|||||||++|+
T Consensus 139 ~~~-------~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~~Di~slGv~l~~ 202 (332)
T cd07857 139 NAD-------CELKICDFGLARGFSENPGE------NAGFMTEYVATRWYRAPEIMLS---FQSYTKAIDVWSVGCILAE 202 (332)
T ss_pred cCC-------CCEEeCcCCCceeccccccc------ccccccCcccCccccCcHHHhC---CCCCCcHHHHHHHHHHHHH
Confidence 887 78999999999765432111 0011123468999999998764 2457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccccccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|++|+.||...+.......+...........+.............. .............+..+.+++.+||+.||.+
T Consensus 203 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 282 (332)
T cd07857 203 LLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTK 282 (332)
T ss_pred HHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCccc
Confidence 9999999987665555444432221111111111100000000000 0000000111134567999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001142 1120 RPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~ 1133 (1142)
|||+.++++|+|++
T Consensus 283 R~t~~~ll~~~~~~ 296 (332)
T cd07857 283 RISVEEALEHPYLA 296 (332)
T ss_pred CCCHHHHhcChhhh
Confidence 99999999999986
No 340
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.6e-32 Score=307.08 Aligned_cols=258 Identities=26% Similarity=0.419 Sum_probs=200.2
Q ss_pred cceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|....+||+|+||.||++... +..+++|..... ....... +.+|+.+++.++||||+++++++...+
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~----~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~~--- 90 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR----KQQRREL----LFNEVVIMRDYQHENVVEMYNSYLVGD--- 90 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc----chhHHHH----HHHHHHHHHhcCCcchhheeeEEEeCC---
Confidence 345578999999999999884 566777764322 1122223 478999999999999999999988654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
+.++||||+++++|.+++.. ..+++..+..++.|++.||+|||++|++||||+|+||+++.+
T Consensus 91 -----------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~- 152 (292)
T cd06657 91 -----------ELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHD- 152 (292)
T ss_pred -----------EEEEEEecCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC-
Confidence 35999999999999988753 358999999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++|+|||.+........ ......|++.|+|||.+.+ ..++.++||||||+++|+|++|
T Consensus 153 ------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~~pE~~~~----~~~~~~~Dv~slGvil~el~tg 212 (292)
T cd06657 153 ------GRVKLSDFGFCAQVSKEVP----------RRKSLVGTPYWMAPELISR----LPYGPEVDIWSLGIMVIEMVDG 212 (292)
T ss_pred ------CCEEEcccccceecccccc----------cccccccCccccCHHHhcC----CCCCchhhHHHHHHHHHHHHhC
Confidence 7899999998865432110 1123458899999998865 4567899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
+.||.+....+....+.....+.+.. ....+..+.+++.+||+.||.+||++.++
T Consensus 213 ~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~~P~~R~~~~~l 267 (292)
T cd06657 213 EPPYFNEPPLKAMKMIRDNLPPKLKN-------------------------LHKVSPSLKGFLDRLLVRDPAQRATAAEL 267 (292)
T ss_pred CCCCCCCCHHHHHHHHHhhCCcccCC-------------------------cccCCHHHHHHHHHHHhCCcccCcCHHHH
Confidence 99998766555444443322111100 00345568899999999999999999999
Q ss_pred HHHHHhhcCCCCCC
Q 001142 1127 YEMFVARTSSSISS 1140 (1142)
Q Consensus 1127 L~~L~~~~ss~~s~ 1140 (1142)
++|+|+......++
T Consensus 268 l~~~~~~~~~~~~~ 281 (292)
T cd06657 268 LKHPFLAKAGPPSC 281 (292)
T ss_pred hcChHHhccCCCcc
Confidence 99999987765544
No 341
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-34 Score=344.44 Aligned_cols=266 Identities=23% Similarity=0.307 Sum_probs=215.6
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
-++|++.++||+|+||.|.++++. ++.+|+|+ +.+...- ..+..- |..|-.+|.....+-||.++-.|.++
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~--lnK~eMlKr~~tA~----F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKI--LNKWEMLKRAETAC----FREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHH--hhHHHHhhchhHHH----HHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 357999999999999999999985 45566665 3321111 111222 36788899888999999999999987
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
.++ |+|||||+||+|-.++.++ .++++..++.++..|+.||.-||+.|+|||||||+|||+
T Consensus 148 ~~L--------------YlVMdY~pGGDlltLlSk~-----~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl 208 (1317)
T KOG0612|consen 148 RYL--------------YLVMDYMPGGDLLTLLSKF-----DRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL 208 (1317)
T ss_pred cce--------------EEEEecccCchHHHHHhhc-----CCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe
Confidence 755 9999999999999999873 369999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC-CCCCchhhHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP-NLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~-~~~s~ksDVwSLGviL~ 1041 (1142)
|.. |++||+|||.+..+... |.......+|||.|.+||++..+..+ +.|++.+|+||+||++|
T Consensus 209 d~~-------GHikLADFGsClkm~~d---------G~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~Y 272 (1317)
T KOG0612|consen 209 DKS-------GHIKLADFGSCLKMDAD---------GTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMY 272 (1317)
T ss_pred ccc-------CcEeeccchhHHhcCCC---------CcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHH
Confidence 998 99999999999776542 22344567899999999999887766 78999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
||+.|..||...+..+.+..|..... .+..| .+..+++.+++||.+.+. +|+.|.
T Consensus 273 EMlyG~TPFYadslveTY~KIm~hk~-----------------------~l~FP-~~~~VSeeakdLI~~ll~-~~e~RL 327 (1317)
T KOG0612|consen 273 EMLYGETPFYADSLVETYGKIMNHKE-----------------------SLSFP-DETDVSEEAKDLIEALLC-DREVRL 327 (1317)
T ss_pred HHHcCCCcchHHHHHHHHHHHhchhh-----------------------hcCCC-cccccCHHHHHHHHHHhc-Chhhhc
Confidence 99999999998888787777743311 11122 122578889999998875 678888
Q ss_pred C---HHHHHHHHHhhcCCC
Q 001142 1122 T---AGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1122 S---a~EVL~~L~~~~ss~ 1137 (1142)
. ++++-.||||..-.|
T Consensus 328 grngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 328 GRNGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred ccccHHHHHhCccccCCCh
Confidence 7 999999999987655
No 342
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=7.1e-32 Score=301.08 Aligned_cols=282 Identities=22% Similarity=0.214 Sum_probs=200.5
Q ss_pred cceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEecCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKISSK 883 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkl~g~~~~~~ 883 (1142)
|++.+.||+|+||.||+|++. +..+|+|+.+..... ......+ .+|+.+++++ .||||+++++++...+
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~----~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 74 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE--EGIPLST----LREIALLKQLESFEHPNIVRLLDVCHGPR 74 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc--chhhhhH----HHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence 678999999999999999984 677888886544321 1111222 5677777666 5999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. .....+++|||++ ++|.+++... ....+++..+..++.||+.||.|||+++++|+||+|+||+++
T Consensus 75 ~~---------~~~~~~l~~e~~~-~~l~~~l~~~---~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~ 141 (287)
T cd07838 75 TD---------RELKLTLVFEHVD-QDLATYLSKC---PKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT 141 (287)
T ss_pred CC---------CCceeEEEehhcc-cCHHHHHHHc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc
Confidence 21 2234699999997 6899988752 223589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+....... ......++..|+|||++.+ ..++.++|||||||++|+|
T Consensus 142 ~~-------~~~~l~dfg~~~~~~~~~-----------~~~~~~~~~~~~~PE~~~~----~~~~~~~Di~s~G~~l~~l 199 (287)
T cd07838 142 SD-------GQVKIADFGLARIYSFEM-----------ALTSVVVTLWYRAPEVLLQ----SSYATPVDMWSVGCIFAEL 199 (287)
T ss_pred cC-------CCEEEeccCcceeccCCc-----------ccccccccccccChHHhcc----CCCCCcchhhhHHHHHHHH
Confidence 87 789999999987653321 1112347888999999875 4678899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|++||.+....+....+...........+... .......................++.+.+++.+||+.||.+||++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~ 278 (287)
T cd07838 200 FRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN-VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISA 278 (287)
T ss_pred HhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC-cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCH
Confidence 9999999887766655444221111100000000 000000000000001111112456778999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.+++.|+|+
T Consensus 279 ~~il~~~~~ 287 (287)
T cd07838 279 FEALQHPYF 287 (287)
T ss_pred HHHhcCcCC
Confidence 999999885
No 343
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=5.9e-32 Score=310.10 Aligned_cols=287 Identities=18% Similarity=0.259 Sum_probs=197.7
Q ss_pred eeeccc--CceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001142 813 DEAGKS--VSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 813 ~~LG~G--sfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
..||+| +||+||+|++ .+..||+|+..... ......+. +.+|+.+++.++||||+++++++...+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~----~~~e~~~~~~l~h~niv~~~~~~~~~~~---- 73 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLEN--CTEEHLKA----LQNEVVLSHFFRHPNIMTSWTVFTTGSW---- 73 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEecccc--CCHHHHHH----HHHHHHHHHhCCCCCcceEeeeEecCCc----
Confidence 466777 9999999988 57889999865432 22233333 3789999999999999999999987553
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
.++||||+++++|.+++.... ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 74 ----------~~~v~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~--- 137 (328)
T cd08226 74 ----------LWVISPFMAYGSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD--- 137 (328)
T ss_pred ----------eEEEEecccCCCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCC---
Confidence 499999999999999987632 2358999999999999999999999999999999999999877
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1048 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~ 1048 (1142)
+.++++||+.+............ .........++..|+|||++.+. ...++.++|||||||++|+|++|+.
T Consensus 138 ----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~~DiwslG~~l~el~~g~~ 208 (328)
T cd08226 138 ----GLVSLSGLSHLYSLVRNGQKAKV---VYDFPQFSTSVLPWLSPELLRQD--LYGYNVKSDIYSVGITACELATGRV 208 (328)
T ss_pred ----CcEEEechHHHhhhhccCccccc---cccccccccCccCccChhhhcCC--CCCCCchhhHHHHHHHHHHHHhCCC
Confidence 78999999865432211100000 00011123456779999998652 1347899999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhCCCCCchhHHh-------hhcc---ccc----cccc------ccCCCCCCchhhhhhHHHHHHH
Q 001142 1049 PYMGLSELEIHDLIQMGKRPRLTDELE-------ALGS---CHE----HEVA------QSGSGFEKPEAELETLSFLVDV 1108 (1142)
Q Consensus 1049 Pf~~~~~~el~~~I~~~~~p~l~~~l~-------~~~~---~~~----~~~~------~~~~~~~~~~~~~~~~~~L~dL 1108 (1142)
||......+.......... ..+.... .... ... .... ...............++.+.+|
T Consensus 209 p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 287 (328)
T cd08226 209 PFQDMLRTQMLLQKLKGPP-YSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNL 287 (328)
T ss_pred CCCCcChHHHHHHHhcCCC-CCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHH
Confidence 9987654443322222111 0000000 0000 000 0000 0000000111122467789999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+.+||+.||++|||+.|+++|+|+...
T Consensus 288 i~~~l~~dP~~Rpta~e~l~~~~~~~~ 314 (328)
T cd08226 288 VELCLQQDPEKRPSASSLLSHAFFKQV 314 (328)
T ss_pred HHHHccCCcccCCCHHHHhhCHHHHHH
Confidence 999999999999999999999999753
No 344
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.2e-32 Score=304.79 Aligned_cols=251 Identities=21% Similarity=0.255 Sum_probs=186.6
Q ss_pred eecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCC
Q 001142 814 EAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGN 891 (1142)
Q Consensus 814 ~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~ 891 (1142)
.||+|+||.||+|.+ .+..+|+|+...+........ ..+ ......+.+++...||||+++++++...+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------- 70 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-TLA-LNERIMLSLVSTGDCPFIVCMSYAFHTPD-------- 70 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhH-HHH-HHHHHHHHHHHhCCCCcEeeeeeeeecCC--------
Confidence 489999999999987 456788887543321111111 111 00012234455567999999999988654
Q ss_pred CccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCC
Q 001142 892 PEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADG 971 (1142)
Q Consensus 892 ~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~ 971 (1142)
..++||||++|++|..++.. ...+++..+..++.|++.||.|||+++|+||||||+||+++.+
T Consensus 71 ------~~~~v~e~~~g~~L~~~l~~-----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~------ 133 (278)
T cd05606 71 ------KLSFILDLMNGGDLHYHLSQ-----HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH------ 133 (278)
T ss_pred ------EEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCC------
Confidence 34999999999999988865 2468999999999999999999999999999999999999877
Q ss_pred CCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 001142 972 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYM 1051 (1142)
Q Consensus 972 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~ 1051 (1142)
+.++|+|||++....... .....|+..|+|||++.+ +..++.++||||+||++|+|++|+.||.
T Consensus 134 -~~~kl~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~s~G~~l~~l~~g~~p~~ 197 (278)
T cd05606 134 -GHVRISDLGLACDFSKKK------------PHASVGTHGYMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFR 197 (278)
T ss_pred -CCEEEccCcCccccCccC------------CcCcCCCcCCcCcHHhcC---CCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 789999999986543211 113468999999999864 2357899999999999999999999997
Q ss_pred CCCHH---HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CH
Q 001142 1052 GLSEL---EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TA 1123 (1142)
Q Consensus 1052 ~~~~~---el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-----Sa 1123 (1142)
+.... .....+. ...+.++ ...+..+.+++.+||..+|.+|| ++
T Consensus 198 ~~~~~~~~~~~~~~~-~~~~~~~---------------------------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~ 249 (278)
T cd05606 198 QHKTKDKHEIDRMTL-TMAVELP---------------------------DSFSPELRSLLEGLLQRDVNRRLGCLGRGA 249 (278)
T ss_pred CCCccchHHHHHHhh-ccCCCCC---------------------------CcCCHHHHHHHHHHhhcCHHhccCCCCCCH
Confidence 64221 1111111 1111110 13456799999999999999999 99
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.++++|+|++.-
T Consensus 250 ~~ll~~~~~~~~ 261 (278)
T cd05606 250 QEVKEHPFFRSL 261 (278)
T ss_pred HHHHhCccccCC
Confidence 999999999754
No 345
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.9e-32 Score=299.57 Aligned_cols=258 Identities=26% Similarity=0.333 Sum_probs=197.8
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 815 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 815 LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
||+|+||.||++.+. +..+++|+..... . ..+.....+.+|++++++++||||+++++.+....
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~--~---~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--------- 66 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKAD--M---IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK--------- 66 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchh--h---hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc---------
Confidence 689999999999985 6778888753221 1 11122234478999999999999999999887544
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 972 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~ 972 (1142)
..++||||+++++|.+++.+. ..+++..+..++.||+.||+|||++|++|+||+|+||+++.+
T Consensus 67 -----~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~------- 129 (265)
T cd05579 67 -----NLYLVMEYLPGGDLASLLENV-----GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN------- 129 (265)
T ss_pred -----EEEEEEecCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC-------
Confidence 459999999999999999762 368999999999999999999999999999999999999987
Q ss_pred CeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001142 973 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1052 (1142)
Q Consensus 973 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~ 1052 (1142)
+.++|+|||++.......... . ...........++..|+|||.... ..++.++||||||+++|+|++|..||..
T Consensus 130 ~~~~l~dfg~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~Pe~~~~----~~~~~~~Dv~slG~~~~~l~~g~~p~~~ 203 (265)
T cd05579 130 GHLKLTDFGLSKVGLVRRQIN-L-NDDEKEDKRIVGTPDYIAPEVILG----QGHSKTVDWWSLGCILYEFLVGIPPFHG 203 (265)
T ss_pred CCEEEEecccchhcccCcccc-c-ccccccccCcccCccccCHHHhcC----CCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 789999999986533211100 0 000111223457889999999875 3477899999999999999999999987
Q ss_pred CCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH---HHHHHH
Q 001142 1053 LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA---GDLYEM 1129 (1142)
Q Consensus 1053 ~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa---~EVL~~ 1129 (1142)
....+....+..+.... +.. ...+..+.+++.+||+.+|.+|||+ .++++|
T Consensus 204 ~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 204 ETPEEIFQNILNGKIEW-PED-------------------------VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred CCHHHHHHHHhcCCcCC-Ccc-------------------------ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 77666665554322111 000 0235678999999999999999999 999999
Q ss_pred HHhhcC
Q 001142 1130 FVARTS 1135 (1142)
Q Consensus 1130 L~~~~s 1135 (1142)
+|+..-
T Consensus 258 ~~~~~~ 263 (265)
T cd05579 258 PFFKGI 263 (265)
T ss_pred ccccCC
Confidence 999743
No 346
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-33 Score=294.49 Aligned_cols=264 Identities=22% Similarity=0.383 Sum_probs=208.0
Q ss_pred CCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEec
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKIS 881 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~ 881 (1142)
..++.+.+....||.|+.|+||++++..+...++|+....+.. .++.++ ++..+.++.+-+ .|+||+.+|+|..
T Consensus 88 ~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N-kee~kR----ILmDldvv~~s~dcpyIV~c~GyFi~ 162 (391)
T KOG0983|consen 88 QADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN-KEENKR----ILMDLDVVLKSHDCPYIVQCFGYFIT 162 (391)
T ss_pred ccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC-HHHHHH----HHHhhhHHhhccCCCeeeeeeeEEee
Confidence 4567778899999999999999999977555555544554433 233333 478898887775 9999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCe
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENI 960 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NI 960 (1142)
+... ++.||.|. .-++.++++. ..++++..+-++..-+++||.||-+ +||+|||+||+||
T Consensus 163 n~dV--------------~IcMelMs-~C~ekLlkri----k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNI 223 (391)
T KOG0983|consen 163 NTDV--------------FICMELMS-TCAEKLLKRI----KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI 223 (391)
T ss_pred CchH--------------HHHHHHHH-HHHHHHHHHh----cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccce
Confidence 6543 88999984 5556666552 4579999999999999999999985 6999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|+|+. |++||||||.+..+.+.. ......|-+.|||||.+.-. ....|+-++||||||+.+
T Consensus 224 LlDe~-------GniKlCDFGIsGrlvdSk-----------AhtrsAGC~~YMaPERidp~-~~~kYDiRaDVWSlGITl 284 (391)
T KOG0983|consen 224 LLDER-------GNIKLCDFGISGRLVDSK-----------AHTRSAGCAAYMAPERIDPP-DKPKYDIRADVWSLGITL 284 (391)
T ss_pred EEccC-------CCEEeecccccceeeccc-----------ccccccCCccccCccccCCC-CCCccchhhhhhhhccch
Confidence 99988 899999999997765432 12234688999999998653 246789999999999999
Q ss_pred HHHHhCCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+||+||+.||.+. .+.++...+....+|.++... ..++.+.+++..||+.|+.+
T Consensus 285 veLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~-------------------------gFSp~F~~fv~~CL~kd~r~ 339 (391)
T KOG0983|consen 285 VELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHM-------------------------GFSPDFQSFVKDCLTKDHRK 339 (391)
T ss_pred hhhhcccCCCCCCCccHHHHHHHHhcCCCCCCccc-------------------------CcCHHHHHHHHHHhhcCccc
Confidence 9999999999873 345666677665555444211 35678999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001142 1120 RPTAGDLYEMFVART 1134 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ 1134 (1142)
||...++++|+|...
T Consensus 340 RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 340 RPKYNKLLEHPFIKR 354 (391)
T ss_pred CcchHHHhcCcceee
Confidence 999999999998764
No 347
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=6.1e-32 Score=294.92 Aligned_cols=256 Identities=32% Similarity=0.492 Sum_probs=199.2
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|.+.+.||+|++|.||+|... +..+++|+..... ......+.+ .+|+.++++++||||+++++.+.+..
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSG--DSEEELEAL----EREIRILSSLQHPNIVRYYGSERDEE-- 72 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccc--cchHHHHHH----HHHHHHHHHcCCCCEeeEEEEEecCC--
Confidence 4788999999999999999985 6677887754332 222333344 79999999999999999999987641
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
....++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.+
T Consensus 73 ----------~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~ 137 (260)
T cd06606 73 ----------KNTLNIFLEYVSGGSLSSLLKK-----FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSD 137 (260)
T ss_pred ----------CCeEEEEEEecCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCC
Confidence 1245999999999999999976 2378999999999999999999999999999999999999886
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+......... .......++..|+|||.+.. ..++.++||||||+++++|++
T Consensus 138 -------~~~~l~d~~~~~~~~~~~~~--------~~~~~~~~~~~y~~pE~~~~----~~~~~~~Dv~slG~il~~l~~ 198 (260)
T cd06606 138 -------GVVKLADFGCAKRLGDIETG--------EGTGSVRGTPYWMAPEVIRG----EEYGRAADIWSLGCTVIEMAT 198 (260)
T ss_pred -------CCEEEcccccEEeccccccc--------ccccCCCCCccccCHhhhcC----CCCCchhhHHHHHHHHHHHHh
Confidence 78999999998765442210 00123458889999999876 347899999999999999999
Q ss_pred CCCCCCCCC-HHHHHHHHHh-CCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1046 LQVPYMGLS-ELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1046 G~~Pf~~~~-~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
|..||.... .......+.. ...+.+ ....+..+.+++.+||+.||.+||++
T Consensus 199 g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~l~~~i~~~l~~~p~~Rp~~ 251 (260)
T cd06606 199 GKPPWSELGNPMAALYKIGSSGEPPEI---------------------------PEHLSEEAKDFLRKCLRRDPKKRPTA 251 (260)
T ss_pred CCCCCCCCCchHHHHHhccccCCCcCC---------------------------CcccCHHHHHHHHHhCcCChhhCCCH
Confidence 999998654 1222211111 011110 01335679999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.++++|+|+
T Consensus 252 ~~ll~~~~~ 260 (260)
T cd06606 252 DELLQHPFL 260 (260)
T ss_pred HHHhhCCCC
Confidence 999999985
No 348
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=4.4e-32 Score=302.08 Aligned_cols=278 Identities=23% Similarity=0.286 Sum_probs=199.4
Q ss_pred cceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|++.+.||+|++|.||+|... +..+++|...... ....... .+.+|+.++++++||||+++++++....
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~----~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 71 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRF--ESEGIPK----TALREIKLLKELNHPNIIKLLDVFRHKG--- 71 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccc--ccchhHH----HHHHHHHHHHHhcCCCcchHHHhhccCC---
Confidence 677899999999999999974 5567777643322 1111122 3378999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..++||||++ ++|.+++... ...+++..+..++.||+.||.|||+++|+|+||||+||+++.+
T Consensus 72 -----------~~~~v~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~- 134 (283)
T cd05118 72 -----------DLYLVFEFMD-TDLYKLIKDR----QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTE- 134 (283)
T ss_pred -----------CEEEEEeccC-CCHHHHHHhh----cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCC-
Confidence 3499999997 5888887651 2468999999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++|+|||.+........ ......++..|+|||.+.+ ...++.++||||||+++|+|++|
T Consensus 135 ------~~~~l~df~~~~~~~~~~~----------~~~~~~~~~~~~~PE~~~~---~~~~~~~~Di~slG~~l~~l~tg 195 (283)
T cd05118 135 ------GVLKLADFGLARSFGSPVR----------PYTHYVVTRWYRAPELLLG---DKGYSTPVDIWSVGCIFAELLSR 195 (283)
T ss_pred ------CcEEEeeeeeeEecCCCcc----------cccCccCcccccCcHHHhc---CCCCCchhHHHHHHHHHHHHHhC
Confidence 7899999999876543210 1112357888999999875 23578999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccc---ccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---HEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+.||...+..+....+........+..+...... ....... .............+..+.+++.+||+.||.+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~ 274 (283)
T cd05118 196 RPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPK-KAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITA 274 (283)
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhcc-ccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCH
Confidence 9999876665544433221111111111110000 0000000 00000111122457789999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.+++.|+|+
T Consensus 275 ~~ll~~~~~ 283 (283)
T cd05118 275 EQALAHPYF 283 (283)
T ss_pred HHHhhCCCC
Confidence 999999985
No 349
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.3e-32 Score=301.65 Aligned_cols=273 Identities=23% Similarity=0.357 Sum_probs=194.8
Q ss_pred CCcceeeeecccCceEEEEEEEC------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
..|++.+.||+|+||.||+|++. +..+|+|+..... .. ...+.+ .+|+.+++++.||||+++++++.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~--~~-~~~~~~----~~ei~~l~~l~~~~i~~~~~~~~ 76 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSG--EE-QHRSDF----EREIEILRTLDHENIVKYKGVCE 76 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEecccc--ch-HHHHHH----HHHHHHHHhCCCCChheEEeeee
Confidence 45788899999999999999874 4567888754221 11 223334 89999999999999999999886
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
... ....++||||+++++|.+++... ...+++..+..++.|++.||+|||++||+|+||||+||
T Consensus 77 ~~~------------~~~~~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni 140 (284)
T cd05038 77 KPG------------GRSLRLIMEYLPSGSLRDYLQRH----RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNI 140 (284)
T ss_pred cCC------------CCceEEEEecCCCCCHHHHHHhC----ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhE
Confidence 532 12459999999999999999752 23589999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+++.+ +.++|+|||.+.......... .......++..|+|||.+.+ ..++.++||||||+++
T Consensus 141 l~~~~-------~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~~Pe~~~~----~~~~~~~Di~slG~~l 202 (284)
T cd05038 141 LVESE-------DLVKISDFGLAKVLPEDKDYY-------YVKEPGESPIFWYAPECLRT----SKFSSASDVWSFGVTL 202 (284)
T ss_pred EEcCC-------CCEEEcccccccccccCCcce-------eccCCCCCcccccCcHHHcc----CCCCcccchHHHhhhh
Confidence 99887 789999999997654221110 00111235567999999865 4678899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|||++|..|+........................... ........ ...++..+.+++.+||+.+|.+|
T Consensus 203 ~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~R 270 (284)
T cd05038 203 YELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELL---------KEGERLPR---PPSCPDEVYDLMKLCWEAEPQDR 270 (284)
T ss_pred heeeccCCCcccccchhccccccccccccHHHHHHHH---------HcCCcCCC---CccCCHHHHHHHHHHhccChhhC
Confidence 9999999998653221110000000000000000000 00000000 11345679999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001142 1121 PTAGDLYEMFVA 1132 (1142)
Q Consensus 1121 PSa~EVL~~L~~ 1132 (1142)
||+.||++.+..
T Consensus 271 pt~~ei~~~l~~ 282 (284)
T cd05038 271 PSFADLILIVDR 282 (284)
T ss_pred CCHHHHHHHHhh
Confidence 999999998764
No 350
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=3.3e-32 Score=311.63 Aligned_cols=290 Identities=19% Similarity=0.213 Sum_probs=207.1
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
+|++.+.||+|++|.||+|++. +..+++|... .........+. +.+|+.++++++||||+++++++.....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~--~~~~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~~- 73 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKIS--NVFDDLIDAKR----ILREIKLLRHLRHENIIGLLDILRPPSP- 73 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeec--cccccchhhhh----HHHHHHHHHhcCCcchhhhhhhhcccCc-
Confidence 4889999999999999999974 5667777643 22111222233 3789999999999999999999876431
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
......|+||||++ ++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 74 --------~~~~~~~lv~e~~~-~~l~~~l~~-----~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~ 139 (330)
T cd07834 74 --------EDFNDVYIVTELME-TDLHKVIKS-----PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN 139 (330)
T ss_pred --------ccccceEEEecchh-hhHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 11224699999997 688888864 2379999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+......... ........+++.|+|||++.+. ..++.++||||||+++|+|++
T Consensus 140 -------~~~~L~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~---~~~~~~sDi~slG~il~~l~~ 202 (330)
T cd07834 140 -------CDLKICDFGLARGVDPDEDE-------KGFLTEYVVTRWYRAPELLLSS---SRYTKAIDIWSVGCIFAELLT 202 (330)
T ss_pred -------CCEEEcccCceEeecccccc-------cccccccccccCcCCceeeecc---cCCCcchhHHHHHHHHHHHHc
Confidence 78999999999765432210 0011234578899999998762 267899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccc-cccccccc--CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-HEHEVAQS--GSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|+.||.+.+..+....+...........+...... ........ .............+..+.+++.+||+.+|.+|||
T Consensus 203 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 282 (330)
T cd07834 203 RKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT 282 (330)
T ss_pred CCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC
Confidence 99999887776655555332222111111100000 00000000 0000000011135677999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001142 1123 AGDLYEMFVARTS 1135 (1142)
Q Consensus 1123 a~EVL~~L~~~~s 1135 (1142)
+.+++.|+|+..-
T Consensus 283 ~~~ll~~~~~~~~ 295 (330)
T cd07834 283 ADEALAHPYLAQL 295 (330)
T ss_pred HHHHHhCccHHhh
Confidence 9999999999754
No 351
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=6.8e-32 Score=301.21 Aligned_cols=277 Identities=24% Similarity=0.265 Sum_probs=196.9
Q ss_pred cceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~~ 885 (1142)
|++.+.||+|++|+||+|... +..+++|....+ ........ ..+|+..+++++ ||||+++++++.+.+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~-----~~~e~~~l~~~~~h~~i~~~~~~~~~~~-- 71 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKK--FYSWEECM-----NLREVKSLRKLNEHPNIVKLKEVFREND-- 71 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhh--ccchhHHH-----HHHHHHHHHhccCCCCchhHHHHhhcCC--
Confidence 678899999999999999984 456777764322 11112111 247999999998 999999999987644
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+ +++|.+++... ....+++..+..++.|++.||.|||++|++|+||+|+||+++.+
T Consensus 72 ------------~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~ 135 (283)
T cd07830 72 ------------ELYFVFEYM-EGNLYQLMKDR---KGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP 135 (283)
T ss_pred ------------cEEEEEecC-CCCHHHHHHhc---ccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC
Confidence 349999999 68999988752 12468999999999999999999999999999999999999987
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+....... ......++..|+|||++.. ...++.++||||||+++++|++
T Consensus 136 -------~~~~l~d~~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~---~~~~~~~~Di~s~G~~l~el~~ 194 (283)
T cd07830 136 -------EVVKIADFGLAREIRSRP-----------PYTDYVSTRWYRAPEILLR---STSYSSPVDIWALGCIMAELYT 194 (283)
T ss_pred -------CCEEEeecccceeccCCC-----------CcCCCCCcccccCceeeec---CcCcCCccchhhHHHHHHHHHh
Confidence 789999999987543211 1123457889999998754 2457889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhh---cccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEAL---GSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|+.||......+....+...........+... .......... .............+..+.+++.+||+.||++|||
T Consensus 195 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt 273 (283)
T cd07830 195 LRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQ-FAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT 273 (283)
T ss_pred CCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccc-cccccHHHHcccCCHHHHHHHHHhcccCcccCCC
Confidence 99999876655444333222111111111000 0000000000 0000000000122567999999999999999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
+.|++.|+|+
T Consensus 274 ~~ei~~~~~~ 283 (283)
T cd07830 274 ASQALQHPYF 283 (283)
T ss_pred HHHHhhCCCC
Confidence 9999999885
No 352
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-33 Score=316.72 Aligned_cols=251 Identities=22% Similarity=0.393 Sum_probs=207.5
Q ss_pred cceeeeecccCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.++.+.||.|-||.||.|.+ ++...||+|+..+... ..+..+.| +.|..+|+.+.|||||+++|.+.+..
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekf----lqEa~iMrnfdHphIikLIGv~~e~P- 464 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKF----LQEASIMRNFDHPHIIKLIGVCVEQP- 464 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHH----HHHHHHHHhCCCcchhheeeeeeccc-
Confidence 36678999999999999997 3556777776665433 33445556 89999999999999999999998643
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.|||||+++-|.|..+++. ....++......++.||..||.|||+.+.|||||-..|||+..
T Consensus 465 --------------~WivmEL~~~GELr~yLq~----nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsS 526 (974)
T KOG4257|consen 465 --------------MWIVMELAPLGELREYLQQ----NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSS 526 (974)
T ss_pred --------------eeEEEecccchhHHHHHHh----ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecC
Confidence 3999999999999999986 2346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
. ..|||+|||+++.+.+..... + ....-...|||||.+.. ..++.++|||-|||.+||++
T Consensus 527 p-------~CVKLaDFGLSR~~ed~~yYk--a-------S~~kLPIKWmaPESINf----RrFTtASDVWMFgVCmWEIl 586 (974)
T KOG4257|consen 527 P-------QCVKLADFGLSRYLEDDAYYK--A-------SRGKLPIKWMAPESINF----RRFTTASDVWMFGVCMWEIL 586 (974)
T ss_pred c-------ceeeecccchhhhccccchhh--c-------cccccceeecCccccch----hcccchhhHHHHHHHHHHHH
Confidence 7 689999999999876643221 1 11124567999999875 57899999999999999998
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
. |..||++....+++..+.+|.+++.+. .+++.+..|+.+||.+||.+||.+
T Consensus 587 ~lGvkPfqgvkNsDVI~~iEnGeRlP~P~---------------------------nCPp~LYslmskcWayeP~kRPrf 639 (974)
T KOG4257|consen 587 SLGVKPFQGVKNSDVIGHIENGERLPCPP---------------------------NCPPALYSLMSKCWAYEPSKRPRF 639 (974)
T ss_pred HhcCCccccccccceEEEecCCCCCCCCC---------------------------CCChHHHHHHHHHhccCcccCCcH
Confidence 7 999999987777777777777665442 677889999999999999999999
Q ss_pred HHHHHHH
Q 001142 1124 GDLYEMF 1130 (1142)
Q Consensus 1124 ~EVL~~L 1130 (1142)
.|+...+
T Consensus 640 tei~~~l 646 (974)
T KOG4257|consen 640 TEIKAIL 646 (974)
T ss_pred HHHHHHH
Confidence 9887654
No 353
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=7e-32 Score=304.39 Aligned_cols=264 Identities=23% Similarity=0.358 Sum_probs=198.3
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeE
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK 879 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~ 879 (1142)
...+++|++.+.||+|+||.||+|.+. +..+|+|+.... .. ......+ ..|+.++.+.. ||||+++++++
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~--~~-~~~~~~~----~~e~~~~~~~~~~~~i~~~~~~~ 83 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRT--GN-KEENKRI----LMDLDVVLKSHDCPYIVKCYGYF 83 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEecc--CC-hHHHHHH----HHHHHHHHhccCCCchHhhheee
Confidence 456788999999999999999999986 677888875422 11 1222223 56777777775 99999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSE 958 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~ 958 (1142)
.+... .++||||++ ++|.+++... ...+++..+..++.||+.||+|||+ .||+||||+|+
T Consensus 84 ~~~~~--------------~~~v~e~~~-~~l~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~ 144 (296)
T cd06618 84 ITDSD--------------VFICMELMS-TCLDKLLKRI----QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPS 144 (296)
T ss_pred ecCCe--------------EEEEeeccC-cCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHH
Confidence 86553 499999995 6888877652 2368999999999999999999997 59999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
||+++.+ +.+||+|||++..+..... .....++..|+|||.+.+......++.++||||||+
T Consensus 145 nill~~~-------~~~kL~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~ 206 (296)
T cd06618 145 NILLDAS-------GNVKLCDFGISGRLVDSKA-----------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGI 206 (296)
T ss_pred HEEEcCC-------CCEEECccccchhccCCCc-----------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHH
Confidence 9999876 7899999999865432111 112247888999999875322245788999999999
Q ss_pred HHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
++|+|++|+.||..... .+....+.....+..+. ....+..+.+++.+||..||
T Consensus 207 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~~p 261 (296)
T cd06618 207 SLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPP-------------------------NEGFSPDFCSFVDLCLTKDH 261 (296)
T ss_pred HHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCC-------------------------CCCCCHHHHHHHHHHccCCh
Confidence 99999999999975322 22232322222111110 00345679999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001142 1118 TERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~s 1135 (1142)
.+||++.++++|+|+...
T Consensus 262 ~~Rp~~~~il~~~~~~~~ 279 (296)
T cd06618 262 RKRPKYRELLQHPFIRRY 279 (296)
T ss_pred hhCCCHHHHhcChhhhcc
Confidence 999999999999998754
No 354
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=9.5e-33 Score=320.83 Aligned_cols=258 Identities=25% Similarity=0.359 Sum_probs=212.0
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
....+..|.+.+.||+|.|+.|.+|++ .+..||+|+ ++++.........+ .+|+++|+.+.|||||+++.+.
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~--idkt~ln~~~~~k~----~rev~imk~l~HPnIvkl~~v~ 124 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKI--IDKTQLNPSKRQKL----GREVDIMKSLNHPNIVKLFSVI 124 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEE--ehhcccChHHHHHH----HHHHHHHHhcCCcceeeeeeee
Confidence 345567799999999999999999998 567777776 55554444433333 6999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.....+ |+||||+.+|.+++++.+ ..++.+..+..++.|+++|++|||+++|||||||++|
T Consensus 125 ~t~~~l--------------ylV~eya~~ge~~~yl~~-----~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eN 185 (596)
T KOG0586|consen 125 ETEATL--------------YLVMEYASGGELFDYLVK-----HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAEN 185 (596)
T ss_pred eeccee--------------EEEEEeccCchhHHHHHh-----cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhh
Confidence 876644 999999999999999987 3457779999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ .++||+|||++..+.... .....+|++.|.|||++.+. ...++.+|+||+|++
T Consensus 186 ilL~~~-------mnikIaDfgfS~~~~~~~-----------~lqt~cgsppyAaPEl~~g~---~y~gpe~D~Wslgvv 244 (596)
T KOG0586|consen 186 ILLDEN-------MNIKIADFGFSTFFDYGL-----------MLQTFCGSPPYAAPELFNGK---KYDGPEVDIWSLGVV 244 (596)
T ss_pred cccccc-------cceeeeccccceeecccc-----------cccccCCCCCccChHhhcCc---ccCCcceehhhhhhh
Confidence 999988 779999999998765422 23466899999999999873 355799999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|-|+.|..||++....++...+..+... ++ ...+.++.++|+++|..+|.+
T Consensus 245 ly~LV~GsLPFDG~~lk~Lr~rvl~gk~r-Ip---------------------------~~ms~dce~lLrk~lvl~Psk 296 (596)
T KOG0586|consen 245 LYALVEGSLPFDGQNLKELRPRVLRGKYR-IP---------------------------FYMSCDCEDLLRKFLVLNPSK 296 (596)
T ss_pred heeeeecccccCCcccccccchheeeeec-cc---------------------------ceeechhHHHHHHhhccCccc
Confidence 99999999999987666655444333210 00 033456889999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001142 1120 RPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~ 1133 (1142)
|++.+++.+|.|.-
T Consensus 297 r~~~dqim~~~W~n 310 (596)
T KOG0586|consen 297 RGPCDQIMKDRWRN 310 (596)
T ss_pred cCCHHHhhhhcccc
Confidence 99999999999864
No 355
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.6e-32 Score=303.83 Aligned_cols=260 Identities=22% Similarity=0.260 Sum_probs=196.5
Q ss_pred CcceeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 881 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~-----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~ 881 (1142)
+|++.+.||+|+||.||+|.. .+..+|+|+.+......... ....+.+|+.++.++ +|+||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~----~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~ 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAK----TTEHTRTERQVLEHIRQSPFLVTLHYAFQT 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcch----HHHHHHHHHHHHHhcccCCChhceeeEeec
Confidence 478999999999999999986 45678888764321111111 122337899999999 59999999998876
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
+. ..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++|++||||||+|||
T Consensus 77 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil 137 (290)
T cd05613 77 DT--------------KLHLILDYINGGELFTHLSQ-----RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENIL 137 (290)
T ss_pred CC--------------eEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeE
Confidence 54 34899999999999999875 246889999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||++........ .......|+..|+|||.+... ...++.++||||||+++|
T Consensus 138 ~~~~-------~~~kl~dfg~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~--~~~~~~~~Dv~slG~~l~ 199 (290)
T cd05613 138 LDSN-------GHVVLTDFGLSKEFHEDEV---------ERAYSFCGTIEYMAPDIVRGG--DGGHDKAVDWWSMGVLMY 199 (290)
T ss_pred ECCC-------CCEEEeeCccceecccccc---------cccccccCCcccCChhhccCC--CCCCCccccHHHHHHHHH
Confidence 9877 7899999999875432110 011134588899999998642 134678999999999999
Q ss_pred HHHhCCCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1042 ELLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+|++|..||..... ..+...+..... ..+ ...++.+.+++.+||+.||
T Consensus 200 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~ll~~~l~~~p 251 (290)
T cd05613 200 ELLTGASPFTVDGEKNSQAEISRRILKSEP-PYP---------------------------QEMSALAKDIIQRLLMKDP 251 (290)
T ss_pred HHhcCCCCCCcCCccccHHHHHHHhhccCC-CCC---------------------------ccCCHHHHHHHHHHhcCCH
Confidence 99999999964222 112222211111 000 1345568999999999999
Q ss_pred CCCC-----CHHHHHHHHHhhcCC
Q 001142 1118 TERP-----TAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1118 ~~RP-----Sa~EVL~~L~~~~ss 1136 (1142)
++|| ++.+++.|+|+....
T Consensus 252 ~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 252 KKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHhcCCCCCCHHHHHcCcccccCC
Confidence 9997 899999999987543
No 356
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.1e-31 Score=303.16 Aligned_cols=273 Identities=18% Similarity=0.223 Sum_probs=185.9
Q ss_pred CCcceeeeecccCceEEEEEEECCc-----cEEEEEEecccCCCChHHH--HH-hHHhHHHHHHHHhhCCCCCccceeee
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGSA-----DAAAKVRTLKVCGSSADEI--RN-FEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~~-----~vAvKi~~l~~~~~~~~~~--~~-~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
.+|.+.++||+|+||+||+|.+.+. .+++|+............. .. .......+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 4699999999999999999998543 5566654333211100000 00 00111234455667789999999997
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
+..... .....+++||++. .++.+.+... ...++..+..|+.|++.||+|||+++|+||||||+
T Consensus 92 ~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~ 155 (294)
T PHA02882 92 GSFKRC----------RMYYRFILLEKLV-ENTKEIFKRI-----KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPE 155 (294)
T ss_pred eeEecC----------CceEEEEEEehhc-cCHHHHHHhh-----ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 654321 1234578999885 6777777641 23578889999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||++.+ +.++|+|||+|+.+......... .........||+.|+|||+..+ ..++.++|||||||
T Consensus 156 Nill~~~-------~~~~l~DFGla~~~~~~~~~~~~---~~~~~~~~~gt~~y~ape~~~~----~~~~~~~DiwSlG~ 221 (294)
T PHA02882 156 NIMVDGN-------NRGYIIDYGIASHFIIHGKHIEY---SKEQKDLHRGTLYYAGLDAHNG----ACVTRRGDLESLGY 221 (294)
T ss_pred HEEEcCC-------CcEEEEEcCCceeeccCCccccc---ccccccccCCCccccCHHHhCC----CCCCcHHHHHHHHH
Confidence 9999876 78999999999765432111000 0111223469999999999876 56889999999999
Q ss_pred HHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
++|||++|+.||.+... ........... .... .+.. ... ...++.+.+++..|+..+|
T Consensus 222 ~l~el~~g~~P~~~~~~~~~~~~~~~~~~-------~~~~--------~~~~--~~~----~~~~~~~~~~~~~~~~~~~ 280 (294)
T PHA02882 222 CMLKWAGIKLPWKGFGHNGNLIHAAKCDF-------IKRL--------HEGK--IKI----KNANKFIYDFIECVTKLSY 280 (294)
T ss_pred HHHHHHhCCCCCCccccchHHHHHhHHHH-------HHHh--------hhhh--hcc----CCCCHHHHHHHHHHHhCCC
Confidence 99999999999986532 22221111000 0000 0000 000 1345679999999999999
Q ss_pred CCCCCHHHHHHHH
Q 001142 1118 TERPTAGDLYEMF 1130 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L 1130 (1142)
++||++.++++.+
T Consensus 281 ~~rp~~~~l~~~~ 293 (294)
T PHA02882 281 EEKPDYDALIKIF 293 (294)
T ss_pred CCCCCHHHHHHhh
Confidence 9999999998854
No 357
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=6.1e-32 Score=312.20 Aligned_cols=286 Identities=20% Similarity=0.227 Sum_probs=204.7
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|++|.||+|++. +..+++|+.... .......+. +.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRP--FQSAIHAKR----TYRELRLLKHMDHENVIGLLDVFTPAS 87 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccc--cchhhHHHH----HHHHHHHHHhccCCCHHHHHHHhhccc
Confidence 457999999999999999999984 566777764321 111122222 368999999999999999998876543
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. ......++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+.||+||||||+||+++
T Consensus 88 ~~--------~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~ 152 (343)
T cd07851 88 SL--------EDFQDVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 152 (343)
T ss_pred cc--------cccccEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC
Confidence 21 1223469999999 5799998864 4689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+...... .....++..|+|||.+.+ ...++.++|||||||++|+|
T Consensus 153 ~~-------~~~kL~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~---~~~~~~~~DvwslGv~l~el 209 (343)
T cd07851 153 ED-------CELKILDFGLARHTDDE-------------MTGYVATRWYRAPEIMLN---WMHYNQTVDIWSVGCIMAEL 209 (343)
T ss_pred CC-------CCEEEcccccccccccc-------------ccCCcccccccCHHHHhC---CCCCCchHhHHHHHHHHHHH
Confidence 87 78999999998754321 112357888999999864 13567899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCC---chhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK---PEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
++|+.||.+....+....+........+.............+......... .......++.+.+++.+||+.||.+|
T Consensus 210 ltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~R 289 (343)
T cd07851 210 LTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKR 289 (343)
T ss_pred HhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhC
Confidence 999999987666555555433222211111111100000000000000000 01111346789999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||+.+|++|+|+..-
T Consensus 290 pt~~ell~h~~~~~~ 304 (343)
T cd07851 290 ITAAEALAHPYLAEY 304 (343)
T ss_pred CCHHHHhcCCCcccc
Confidence 999999999999754
No 358
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-33 Score=300.78 Aligned_cols=264 Identities=22% Similarity=0.338 Sum_probs=215.9
Q ss_pred CCCCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 801 LDPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 801 ~~~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
..-.+.++|.+.++||+|.||.|-+++- .+..+|+||.+.++.....+ ...- +.|-++|+..+||.+..+--.
T Consensus 162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdE-VAHT----lTE~RVL~~~~HPFLt~LKYs 236 (516)
T KOG0690|consen 162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDE-VAHT----LTENRVLQNCRHPFLTSLKYS 236 (516)
T ss_pred cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHH-hhhh----hhHHHHHHhccCcHHHHhhhh
Confidence 3456788999999999999999999986 56788999865544333322 2222 589999999999999988777
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
|...+ ++|+||||..||.|.-++.+ ...+++...+.+...|+.||.|||+++||+||||.+
T Consensus 237 FQt~d--------------rlCFVMeyanGGeLf~HLsr-----er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLE 297 (516)
T KOG0690|consen 237 FQTQD--------------RLCFVMEYANGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLE 297 (516)
T ss_pred hccCc--------------eEEEEEEEccCceEeeehhh-----hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhh
Confidence 77655 45999999999999988876 457999999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|.|+|.+ |++||.|||+++.--... .....++|||.|.|||++.. ..|+.++|.|.+||
T Consensus 298 NLlLDkD-------GHIKitDFGLCKE~I~~g----------~t~kTFCGTPEYLAPEVleD----nDYgraVDWWG~GV 356 (516)
T KOG0690|consen 298 NLLLDKD-------GHIKITDFGLCKEEIKYG----------DTTKTFCGTPEYLAPEVLED----NDYGRAVDWWGVGV 356 (516)
T ss_pred hheeccC-------CceEeeecccchhccccc----------ceeccccCChhhcCchhhcc----ccccceeehhhhhH
Confidence 9999998 899999999997532211 12346789999999999986 78999999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1039 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
++|||+.|+.||...+...+++.|..... .++ ...+++.+.|+..+|..||.
T Consensus 357 VMYEMmCGRLPFyn~dh~kLFeLIl~ed~-kFP---------------------------r~ls~eAktLLsGLL~kdP~ 408 (516)
T KOG0690|consen 357 VMYEMMCGRLPFYNKDHEKLFELILMEDL-KFP---------------------------RTLSPEAKTLLSGLLKKDPK 408 (516)
T ss_pred HHHHHHhccCcccccchhHHHHHHHhhhc-cCC---------------------------ccCCHHHHHHHHHHhhcChH
Confidence 99999999999998777777777643321 001 14566789999999999999
Q ss_pred CCC-----CHHHHHHHHHhhcCCC
Q 001142 1119 ERP-----TAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1119 ~RP-----Sa~EVL~~L~~~~ss~ 1137 (1142)
+|. .|.||.+|.||..-.+
T Consensus 409 kRLGgGpdDakEi~~h~FF~~v~W 432 (516)
T KOG0690|consen 409 KRLGGGPDDAKEIMRHRFFASVDW 432 (516)
T ss_pred hhcCCCchhHHHHHhhhhhccCCH
Confidence 994 6899999999876543
No 359
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-32 Score=274.29 Aligned_cols=283 Identities=20% Similarity=0.252 Sum_probs=211.5
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|.-.++||+|+||+||+|+.. ...||+|..+++....+ .....++|+-+++.++|.|||++++....+..
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddeg------vpssalreicllkelkhknivrl~dvlhsdkk- 75 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEG------VPSSALREICLLKELKHKNIVRLHDVLHSDKK- 75 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCC------CcHHHHHHHHHHHHhhhcceeehhhhhccCce-
Confidence 5777899999999999999974 45567776666644333 23344799999999999999999999877664
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
+.+|+|||. .+|..+... -++.++.+.++.++.|+++||.|+|++++.||||||+|.||+.+
T Consensus 76 -------------ltlvfe~cd-qdlkkyfds----lng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~n 137 (292)
T KOG0662|consen 76 -------------LTLVFEFCD-QDLKKYFDS----LNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRN 137 (292)
T ss_pred -------------eEEeHHHhh-HHHHHHHHh----cCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccC
Confidence 489999996 677777665 34679999999999999999999999999999999999999988
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+|++|||+++.+....... ...+.|..|++|.++.+ ..-|+..+|+||.|||+.|+..
T Consensus 138 -------gelkladfglarafgipvrcy----------saevvtlwyrppdvlfg---akly~tsidmwsagcifaelan 197 (292)
T KOG0662|consen 138 -------GELKLADFGLARAFGIPVRCY----------SAEVVTLWYRPPDVLFG---AKLYSTSIDMWSAGCIFAELAN 197 (292)
T ss_pred -------CcEEecccchhhhcCCceEee----------eceeeeeeccCcceeee---eehhccchHhhhcchHHHHHhh
Confidence 899999999998776543221 12357999999999987 4678999999999999999987
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccc---cccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEH---EVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|.+.|.+.+..+....|.+.......+.++........ +.......+ ..........-++++++.|.-+|.+|.
T Consensus 198 agrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsw--sqivp~lns~grdllqkll~cnp~qri 275 (292)
T KOG0662|consen 198 AGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSW--SQIVPKLNSTGRDLLQKLLKCNPAQRI 275 (292)
T ss_pred cCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchH--HHHhhhhcchhHHHHHHHhccCccccc
Confidence 77778888777766666443322222222211111100 000000000 001113334468999999999999999
Q ss_pred CHHHHHHHHHhhcCCC
Q 001142 1122 TAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ss~ 1137 (1142)
+|+++++|++|...++
T Consensus 276 saeaalqhpyf~d~s~ 291 (292)
T KOG0662|consen 276 SAEAALQHPYFSDFSP 291 (292)
T ss_pred CHHHHhcCccccccCC
Confidence 9999999999987654
No 360
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.8e-31 Score=304.25 Aligned_cols=255 Identities=27% Similarity=0.409 Sum_probs=196.3
Q ss_pred cceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|...+.||+|+||+||+|++ .+..+++|+...... ......+.+ .+|+.+++.++|||++++++++.+..
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~--- 94 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGK-QTNEKWQDI----IKEVKFLQQLKHPNTIEYKGCYLKEH--- 94 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEecccc-CchHHHHHH----HHHHHHHHhCCCCCCccEEEEEEeCC---
Confidence 67778899999999999987 455677776533211 122222333 78999999999999999999988654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..++||||+. ++|.+++.. ....+++..+..++.||+.||.|||++||+|+||||+||+++.+
T Consensus 95 -----------~~~lv~e~~~-~~l~~~l~~----~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~- 157 (313)
T cd06633 95 -----------TAWLVMEYCL-GSASDLLEV----HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP- 157 (313)
T ss_pred -----------EEEEEEecCC-CCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCC-
Confidence 3499999996 688887764 13468999999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.+||+|||.+..... .....|+..|+|||++.... ...++.++|||||||++|+|++|
T Consensus 158 ------~~~kL~dfg~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~-~~~~~~~sDv~slGvil~el~~g 216 (313)
T cd06633 158 ------GQVKLADFGSASKSSP--------------ANSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAER 216 (313)
T ss_pred ------CCEEEeecCCCcccCC--------------CCCccccccccChhhccccC-CCCCCchhhHHHHHHHHHHHHhC
Confidence 7899999998853211 12345888999999975321 24578899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
..||...........+.....+.... ...+..+.+++.+||+.+|.+||++.++
T Consensus 217 ~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~~P~~Rp~~~~~ 270 (313)
T cd06633 217 KPPLFNMNAMSALYHIAQNDSPTLQS--------------------------NEWTDSFRGFVDYCLQKIPQERPASAEL 270 (313)
T ss_pred CCCCCCCChHHHHHHHHhcCCCCCCc--------------------------cccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 99998765544444433222211110 1334568999999999999999999999
Q ss_pred HHHHHhhcC
Q 001142 1127 YEMFVARTS 1135 (1142)
Q Consensus 1127 L~~L~~~~s 1135 (1142)
+.|+|++..
T Consensus 271 l~~~~~~~~ 279 (313)
T cd06633 271 LRHDFVRRD 279 (313)
T ss_pred hcCcccCCC
Confidence 999999754
No 361
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.98 E-value=1.3e-31 Score=298.27 Aligned_cols=279 Identities=23% Similarity=0.264 Sum_probs=200.8
Q ss_pred cceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|++.+.||+|++|.||+|+.. +..+++|+..... ......+. +..|+.++++++||||+++++++.+..
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~--~~~~~~~~----~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 71 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN--EEEGIPST----ALREISLLKELKHPNIVKLLDVIHTER--- 71 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc--ccccccHH----HHHHHHHHHhcCCCCHHHHHhhhhcCC---
Confidence 677899999999999999984 6778888765432 11111222 368999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..++||||++ ++|.+++... ...+++..+..++.|++.||.|||++||+||||+|+||+++.+
T Consensus 72 -----------~~~~v~e~~~-~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~- 134 (282)
T cd07829 72 -----------KLYLVFEYCD-MDLKKYLDKR----PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD- 134 (282)
T ss_pred -----------ceEEEecCcC-cCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC-
Confidence 3499999997 6999999862 1468999999999999999999999999999999999999887
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.++|+|||.+........ ......++..|+|||.+.+ ...++.++|||||||++|||++|
T Consensus 135 ------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~---~~~~~~~~Dv~slG~~l~~l~~~ 195 (282)
T cd07829 135 ------GVLKLADFGLARAFGIPLR----------TYTHEVVTLWYRAPEILLG---SKHYSTAVDIWSVGCIFAEMITG 195 (282)
T ss_pred ------CCEEEecCCcccccCCCcc----------ccCccccCcCcCChHHhcC---CcCCCccccHHHHHHHHHHHHhC
Confidence 7899999999876433211 1112345778999999865 23678899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccc-cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH-EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
..||......+....+...........+....... ....................+..+.+++.+||..||.+||++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 275 (282)
T cd07829 196 KPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKE 275 (282)
T ss_pred CCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHH
Confidence 99998766555444443222111111111111100 00000000000000011133667999999999999999999999
Q ss_pred HHHHHHh
Q 001142 1126 LYEMFVA 1132 (1142)
Q Consensus 1126 VL~~L~~ 1132 (1142)
++.|+|+
T Consensus 276 ~l~~p~~ 282 (282)
T cd07829 276 ALKHPYF 282 (282)
T ss_pred HhhCcCC
Confidence 9999996
No 362
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=3.5e-32 Score=324.30 Aligned_cols=264 Identities=24% Similarity=0.374 Sum_probs=216.9
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~ 883 (1142)
+.|++.++||+|.+|.||+++. .++.+|+||+.... +..+++ +.|.++++.. .|||++.+||+|.-.+
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-----d~deEi----E~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-----DEEEEI----ELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-----cccHHH----HHHHHHHHhccCCCCcceEEEEEEEec
Confidence 4589999999999999999875 68889999865432 222222 4688999888 5999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. ...++|||||||.|||..++++.+. ...+.|..+..|++.++.|+.|||.+.++|||||-.|||++
T Consensus 90 ~~---------~~DqLWLVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT 157 (953)
T KOG0587|consen 90 PG---------NGDQLWLVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT 157 (953)
T ss_pred CC---------CCCeEEEEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe
Confidence 31 3458899999999999999999864 46799999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL~E 1042 (1142)
.+ +.|||+|||.+..+.... ....++.|||+|||||++.+.. ....|+..+|+||||++..|
T Consensus 158 ~e-------~~VKLvDFGvSaQldsT~----------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIE 220 (953)
T KOG0587|consen 158 EN-------AEVKLVDFGVSAQLDSTV----------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIE 220 (953)
T ss_pred cc-------CcEEEeeeeeeeeeeccc----------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeeh
Confidence 98 789999999997765422 2345788999999999998743 23457889999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|..|.+|+.++.+....-.|-...+|.+... ...++.+.++|..||..|-++||+
T Consensus 221 ladG~PPl~DmHPmraLF~IpRNPPPkLkrp-------------------------~kWs~~FndFIs~cL~Kd~e~RP~ 275 (953)
T KOG0587|consen 221 MAEGAPPLCDMHPMRALFLIPRNPPPKLKRP-------------------------KKWSKKFNDFISTCLVKDYEQRPS 275 (953)
T ss_pred hcCCCCCccCcchhhhhccCCCCCCccccch-------------------------hhHHHHHHHHHHHHHhhccccCcc
Confidence 9999999988777665545444444433211 156778999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001142 1123 AGDLYEMFVAR 1133 (1142)
Q Consensus 1123 a~EVL~~L~~~ 1133 (1142)
+.++++|+|..
T Consensus 276 ~~~ll~hpFi~ 286 (953)
T KOG0587|consen 276 TEELLKHPFIT 286 (953)
T ss_pred hhhhccCCccc
Confidence 99999999876
No 363
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=2e-31 Score=303.01 Aligned_cols=258 Identities=27% Similarity=0.407 Sum_probs=197.9
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|+..+.||+|+||.||+|++ .+..+++|....... ........+ .+|+.+++.++|+|++++++++....
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~-- 88 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQDI----IKEVRFLQKLRHPNTIQYRGCYLREH-- 88 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccc-cChHHHHHH----HHHHHHHHhCCCCCcccEEEEEEcCC--
Confidence 377889999999999999997 455677776542211 112222333 68999999999999999999988654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+. ++|.+++.. ....+++..+..++.|++.||.|||+++++||||||+||+++.+
T Consensus 89 ------------~~~lv~e~~~-~~l~~~~~~----~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~ 151 (308)
T cd06634 89 ------------TAWLVMEYCL-GSASDLLEV----HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 151 (308)
T ss_pred ------------eeEEEEEccC-CCHHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCC
Confidence 3499999997 688887754 12458999999999999999999999999999999999999876
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||++...... ....+++.|+|||.+.... ...++.++|||||||++|+|++
T Consensus 152 -------~~~kl~dfg~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~el~~ 209 (308)
T cd06634 152 -------GLVKLGDFGSASIMAPA--------------NXFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAE 209 (308)
T ss_pred -------CcEEECCcccceeecCc--------------ccccCCccccCHHHHhhcc-cCCCCcccchHHHHHHHHHHHc
Confidence 78999999998654321 1235788999999975321 2356789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||......+....+.....+... ....+..+.++|.+||+.+|.+||++.+
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ 263 (308)
T cd06634 210 RKPPLFNMNAMSALYHIAQNESPALQ--------------------------SGHWSEYFRNFVDSCLQKIPQDRPTSEV 263 (308)
T ss_pred CCCCCccccHHHHHHHHhhcCCCCcC--------------------------cccccHHHHHHHHHHhhCCcccCCCHHH
Confidence 99999765544433333332222111 0134566899999999999999999999
Q ss_pred HHHHHHhhcCCC
Q 001142 1126 LYEMFVARTSSS 1137 (1142)
Q Consensus 1126 VL~~L~~~~ss~ 1137 (1142)
+++|+|+.....
T Consensus 264 ll~~~~~~~~~~ 275 (308)
T cd06634 264 LLKHRFVLRERP 275 (308)
T ss_pred HhhCccccccCC
Confidence 999999876543
No 364
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-32 Score=294.14 Aligned_cols=262 Identities=25% Similarity=0.286 Sum_probs=203.6
Q ss_pred CCCcce-eeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001142 806 FPSLSS-CDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 881 (1142)
Q Consensus 806 ~~~y~l-~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~ 881 (1142)
.++|.+ .++||-|-.|.|-.+.+ .+..+|+|+. .. ... ..+|+++.-.. .|||||.++++|..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL--~D---s~K--------ARrEVeLHw~~s~h~~iV~IidVyeN 126 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVL--LD---SPK--------ARREVELHWMASGHPHIVSIIDVYEN 126 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHH--hc---CHH--------HHhHhhhhhhhcCCCceEEeehhhhh
Confidence 356743 47899999999999887 4666777763 21 111 15788877665 59999999999875
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.-. ....+.+|||.++||.|.+.|++ .+...|++.++-.|++||..|+.|||+.+|.||||||+|+|
T Consensus 127 s~~----------~rkcLLiVmE~meGGeLfsriq~---~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLL 193 (400)
T KOG0604|consen 127 SYQ----------GRKCLLIVMECMEGGELFSRIQD---RGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLL 193 (400)
T ss_pred hcc----------CceeeEeeeecccchHHHHHHHH---cccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhhee
Confidence 321 13356899999999999999987 55677999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
.... .....+||+|||+|+.-.... ...+.+-||+|.|||++.. ..|+...|+||+||++|
T Consensus 194 yt~t----~~na~lKLtDfGFAK~t~~~~-----------~L~TPc~TPyYvaPevlg~----eKydkscdmwSlgVimY 254 (400)
T KOG0604|consen 194 YTTT----SPNAPLKLTDFGFAKETQEPG-----------DLMTPCFTPYYVAPEVLGP----EKYDKSCDMWSLGVIMY 254 (400)
T ss_pred eecC----CCCcceEecccccccccCCCc-----------cccCCcccccccCHHHhCc----hhcCCCCCccchhHHHH
Confidence 9765 233789999999997543211 1234568999999999865 56999999999999999
Q ss_pred HHHhCCCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1042 ELLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
-|+.|.+||....- ..+...|..+... |..+++. ..+++.+++|+.+|..+|
T Consensus 255 IlLCGyPPFYS~hg~aispgMk~rI~~gqy~-----------------------FP~pEWs-~VSe~aKdlIR~LLkt~P 310 (400)
T KOG0604|consen 255 ILLCGYPPFYSNHGLAISPGMKRRIRTGQYE-----------------------FPEPEWS-CVSEAAKDLIRKLLKTEP 310 (400)
T ss_pred HhhcCCCcccccCCccCChhHHhHhhccCcc-----------------------CCChhHh-HHHHHHHHHHHHHhcCCc
Confidence 99999999975322 1234455444432 1222222 778899999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001142 1118 TERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~ss 1136 (1142)
.+|.|+.+++.|+|..+..
T Consensus 311 teRlTI~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 311 TERLTIEEVMDHPWINQYE 329 (400)
T ss_pred hhheeHHHhhcCchhcccc
Confidence 9999999999999987653
No 365
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.98 E-value=9.8e-32 Score=299.28 Aligned_cols=244 Identities=21% Similarity=0.265 Sum_probs=183.7
Q ss_pred Ccceeeee--cccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001142 808 SLSSCDEA--GKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 882 (1142)
Q Consensus 808 ~y~l~~~L--G~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~ 882 (1142)
.|++.+.+ |+|+||.||++.. .+..+++|+..... ... .|+.....+ +||||+++++.+...
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~-----------~e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKN--FNA-----------IEPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhh--cch-----------hhHHHHHHhhcCCCEEEEEEEEecC
Confidence 45565555 9999999999987 45567777754221 111 122222222 699999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+ ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+||++
T Consensus 82 ~--------------~~~iv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~ 142 (267)
T PHA03390 82 K--------------GHVLIMDYIKDGDLFDLLKK-----EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLY 142 (267)
T ss_pred C--------------eeEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE
Confidence 5 34999999999999999976 2378999999999999999999999999999999999999
Q ss_pred ccccccCCCCC-eEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 963 DLERKKADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 963 d~~~~~~~~~~-~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
+.+ + .++|+|||.+...... ....++..|+|||++.+ ..++.++||||||+++|
T Consensus 143 ~~~-------~~~~~l~dfg~~~~~~~~--------------~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~il~ 197 (267)
T PHA03390 143 DRA-------KDRIYLCDYGLCKIIGTP--------------SCYDGTLDYFSPEKIKG----HNYDVSFDWWAVGVLTY 197 (267)
T ss_pred eCC-------CCeEEEecCccceecCCC--------------ccCCCCCcccChhhhcC----CCCCchhhHHHHHHHHH
Confidence 877 4 8999999998654321 12357889999999875 56789999999999999
Q ss_pred HHHhCCCCCCCCCHHHH-HHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEI-HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el-~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
+|++|+.||........ ...+........ ......++.+.+++.+||+.||.+|
T Consensus 198 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~li~~~l~~~p~~R 252 (267)
T PHA03390 198 ELLTGKHPFKEDEDEELDLESLLKRQQKKL-------------------------PFIKNVSKNANDFVQSMLKYNINYR 252 (267)
T ss_pred HHHHCCCCCCCCCcchhhHHHHHHhhcccC-------------------------CcccccCHHHHHHHHHHhccChhhC
Confidence 99999999975433221 111111000000 0001456679999999999999999
Q ss_pred CC-HHHHHHHHHhh
Q 001142 1121 PT-AGDLYEMFVAR 1133 (1142)
Q Consensus 1121 PS-a~EVL~~L~~~ 1133 (1142)
|+ ++++++|+|+.
T Consensus 253 ~~~~~~~l~h~~~~ 266 (267)
T PHA03390 253 LTNYNEIIKHPFLK 266 (267)
T ss_pred CchHHHHhcCCccc
Confidence 96 69999999985
No 366
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=1.8e-33 Score=294.22 Aligned_cols=297 Identities=18% Similarity=0.246 Sum_probs=213.3
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..|+-..+||+|.||.||+|+.. +..||+|.+-.+ .+.+.|.....+|+.+|..++|+|++.+++.+.....
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlme------neKeGfpitalreikiL~~lkHenv~nliEic~tk~T 90 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLME------NEKEGFPITALREIKILQLLKHENVVNLIEICRTKAT 90 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHh------ccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccC
Confidence 45888899999999999999874 455676654332 2223344444799999999999999999988765332
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
- ..+....+|+||.+|+ .+|..++.+ ...+++..++.+++.++..||.|+|.+.|+|||+||.|+||+.
T Consensus 91 p------~~r~r~t~ylVf~~ce-hDLaGlLsn----~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~ 159 (376)
T KOG0669|consen 91 P------TNRDRATFYLVFDFCE-HDLAGLLSN----RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITK 159 (376)
T ss_pred C------cccccceeeeeHHHhh-hhHHHHhcC----ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcC
Confidence 1 1112235799999997 899888864 3467999999999999999999999999999999999999999
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +++||+|||+++.+....... .+.....+.|..|++||.+.+. ..|+++.|||+.|||+.||+
T Consensus 160 d-------gilklADFGlar~fs~~~n~~------kprytnrvvTLwYrppEllLG~---r~yg~~iDiWgAgCimaeMw 223 (376)
T KOG0669|consen 160 D-------GILKLADFGLARAFSTSKNVV------KPRYTNRVVTLWYRPPELLLGD---REYGPPIDIWGAGCIMAEMW 223 (376)
T ss_pred C-------ceEEeeccccccceecccccC------CCCcccceeeeecCCHHHhhcc---cccCCcchhHhHHHHHHHHH
Confidence 8 899999999998765433221 1123355679999999999984 57899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccc------cccccccCC-CCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH------EHEVAQSGS-GFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
|+.+-+++.+..+....|..-.....++.++...... ..+..+... ..+....+....++..+|+..++..||
T Consensus 224 trspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP 303 (376)
T KOG0669|consen 224 TRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDP 303 (376)
T ss_pred ccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCc
Confidence 9999999888777666664322211111111110000 000000000 000000001223467899999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001142 1118 TERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~ss 1136 (1142)
.+|+++++++.|.||....
T Consensus 304 ~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 304 TKRIDADQALNHDFFWKDP 322 (376)
T ss_pred ccCcchHhhhchhhhhcCC
Confidence 9999999999999987553
No 367
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.98 E-value=1.6e-31 Score=299.72 Aligned_cols=260 Identities=24% Similarity=0.254 Sum_probs=193.8
Q ss_pred CcceeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 881 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~-----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~ 881 (1142)
+|++.+.||+|++|.||++++ .+..+|+|+.+.... .........+.+|+.++.++ +||||+++++.+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~----~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~ 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI----VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH----HhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec
Confidence 478999999999999999985 346688887542211 11111122347899999999 59999999998875
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. ..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++||||||+||+
T Consensus 77 ~~--------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil 137 (288)
T cd05583 77 DT--------------KLHLILDYVNGGELFTHLYQ-----REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENIL 137 (288)
T ss_pred CC--------------EEEEEEecCCCCcHHHHHhh-----cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeE
Confidence 44 34899999999999999865 246899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.++|+|||++......... ......|+..|+|||.+.+.. ..++.++||||||+++|
T Consensus 138 ~~~~-------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~--~~~~~~~Dv~slG~il~ 199 (288)
T cd05583 138 LDSE-------GHVVLTDFGLSKEFLAEEEE---------RAYSFCGTIEYMAPEVIRGGS--GGHDKAVDWWSLGVLTF 199 (288)
T ss_pred ECCC-------CCEEEEECcccccccccccc---------ccccccCCccccCHHHhcCCC--CCCcchhhhHHHHHHHH
Confidence 9877 78999999998654322110 111235788999999986521 23678999999999999
Q ss_pred HHHhCCCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1042 ELLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+|++|..||..... .+....+..... ..+ ...+..+.+++.+||+.||
T Consensus 200 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~l~~li~~~l~~~p 251 (288)
T cd05583 200 ELLTGASPFTVDGEQNSQSEISRRILKSKP-PFP---------------------------KTMSAEARDFIQKLLEKDP 251 (288)
T ss_pred HHHhCCCCcccCcccchHHHHHHHHHccCC-CCC---------------------------cccCHHHHHHHHHHhcCCH
Confidence 99999999964321 112122111110 000 1344568999999999999
Q ss_pred CCCCC---HHHHHHHHHhhcCC
Q 001142 1118 TERPT---AGDLYEMFVARTSS 1136 (1142)
Q Consensus 1118 ~~RPS---a~EVL~~L~~~~ss 1136 (1142)
++||| +.++++|+|++.-.
T Consensus 252 ~~R~t~~~~~~~l~~~~~~~~~ 273 (288)
T cd05583 252 KKRLGANGADEIKNHPFFQGID 273 (288)
T ss_pred hhccCcchHHHHhcCcccccCC
Confidence 99998 46779999987643
No 368
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=2.6e-31 Score=332.32 Aligned_cols=149 Identities=26% Similarity=0.282 Sum_probs=125.8
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
++++|.+.++||+|+||.||+|.+. +..||+|+.+.... ..... ...+..|+.+++.++||||+++++++...
T Consensus 2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~-~~~~~----~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~ 76 (669)
T cd05610 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM-INKNM----VHQVQAERDALALSKSPFIVHLYYSLQSA 76 (669)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc-cCHHH----HHHHHHHHHHHHhcCCCCcCeEEEEEEEC
Confidence 3678999999999999999999985 77889998653221 11122 22347899999999999999999888765
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. +.|+||||+++++|.+++.. ...+++..++.|+.||+.||.|||.+||+||||||+|||+
T Consensus 77 ~--------------~~~lVmEy~~g~~L~~li~~-----~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl 137 (669)
T cd05610 77 N--------------NVYLVMEYLIGGDVKSLLHI-----YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI 137 (669)
T ss_pred C--------------EEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE
Confidence 4 45999999999999999975 2458899999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcc
Q 001142 963 DLERKKADGKPVVKLCDFDRAV 984 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~ 984 (1142)
+.+ +.+||+|||+++
T Consensus 138 ~~~-------g~vkL~DFGls~ 152 (669)
T cd05610 138 SNE-------GHIKLTDFGLSK 152 (669)
T ss_pred cCC-------CCEEEEeCCCCc
Confidence 877 789999999986
No 369
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=2.2e-32 Score=301.02 Aligned_cols=262 Identities=25% Similarity=0.318 Sum_probs=210.2
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeee
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGH 878 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~ 878 (1142)
+.....+|.+..+||+|+||.|.+|..+++ .+|+||.+.++.... ++.+-- +.|-++|.-. +-|.+++++.+
T Consensus 344 d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQd-DDvect----m~EKrvLAL~~kppFL~qlHSc 418 (683)
T KOG0696|consen 344 DRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQD-DDVECT----MVEKRVLALPGKPPFLVQLHSC 418 (683)
T ss_pred cceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeec-Ccccce----ehhhhheecCCCCchHHHHHHH
Confidence 345567899999999999999999988654 578887543332211 212111 4577777666 48899999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
|.+.+.+ |+||||+.||+|...|++. ..+.+..+..+|..|+-||-+||++|||+||||.+
T Consensus 419 FQTmDRL--------------yFVMEyvnGGDLMyhiQQ~-----GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLD 479 (683)
T KOG0696|consen 419 FQTMDRL--------------YFVMEYVNGGDLMYHIQQV-----GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLD 479 (683)
T ss_pred hhhhhhe--------------eeEEEEecCchhhhHHHHh-----cccCCchhhhhhHHHHHHhhhhhcCCeeeeecccc
Confidence 9876654 9999999999999999873 56889999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||++.+ +++||.|||+++.--.. .....+++|||.|+|||++.. .+|+..+|+|||||
T Consensus 480 NvmLd~e-------GHiKi~DFGmcKEni~~----------~~TTkTFCGTPdYiAPEIi~Y----qPYgksvDWWa~GV 538 (683)
T KOG0696|consen 480 NVMLDSE-------GHIKIADFGMCKENIFD----------GVTTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGV 538 (683)
T ss_pred ceEeccC-------CceEeeecccccccccC----------CcceeeecCCCcccccceEEe----cccccchhHHHHHH
Confidence 9999998 89999999999753221 123346789999999999986 68999999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1039 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+||||+.|++||.+.++.++++.|....... + ...+.+..+++...|...|.
T Consensus 539 LLyEmlaGQpPFdGeDE~elF~aI~ehnvsy-P---------------------------KslSkEAv~ickg~ltK~P~ 590 (683)
T KOG0696|consen 539 LLYEMLAGQPPFDGEDEDELFQAIMEHNVSY-P---------------------------KSLSKEAVAICKGLLTKHPG 590 (683)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHccCcC-c---------------------------ccccHHHHHHHHHHhhcCCc
Confidence 9999999999999999999998885432211 0 04566788899999999999
Q ss_pred CCCCH-----HHHHHHHHhhcCC
Q 001142 1119 ERPTA-----GDLYEMFVARTSS 1136 (1142)
Q Consensus 1119 ~RPSa-----~EVL~~L~~~~ss 1136 (1142)
+|... .+|-.|++++.-.
T Consensus 591 kRLGcg~~ge~di~~H~FFR~iD 613 (683)
T KOG0696|consen 591 KRLGCGPEGERDIREHPFFRRID 613 (683)
T ss_pred cccCCCCccccchhhCcchhhcc
Confidence 99543 6788888887543
No 370
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.98 E-value=3.9e-31 Score=303.79 Aligned_cols=280 Identities=20% Similarity=0.237 Sum_probs=196.9
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
-++|++.+.||+|+||.||+|... +..+++|...... ......+.+ .+|+.++++++||||+++++++....
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~----~~E~~~l~~l~hpniv~~~~~~~~~~ 82 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPF--STPVLAKRT----YRELKLLKHLRHENIISLSDIFISPL 82 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccc--cccchhHHH----HHHHHHHHhcCCCCeeeEeeeEecCC
Confidence 356999999999999999999874 5567777643221 111222333 68999999999999999999886532
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. ..++||||+ +++|.++++. ..+++..+..++.||+.||.|||++||+||||+|+||+++
T Consensus 83 ~-------------~~~lv~e~~-~~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~ 142 (328)
T cd07856 83 E-------------DIYFVTELL-GTDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN 142 (328)
T ss_pred C-------------cEEEEeehh-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC
Confidence 1 358999999 5789888763 3578889999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.++|+|||.+...... .....++..|+|||++.+ ...++.++||||||+++|+|
T Consensus 143 ~~-------~~~~l~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~il~el 199 (328)
T cd07856 143 EN-------CDLKICDFGLARIQDPQ-------------MTGYVSTRYYRAPEIMLT---WQKYDVEVDIWSAGCIFAEM 199 (328)
T ss_pred CC-------CCEEeCccccccccCCC-------------cCCCcccccccCceeeec---cCCcCcHHHHHHHHHHHHHH
Confidence 76 78999999998643221 112357888999998754 24578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccc-ccc--CCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEV-AQS--GSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
++|+.||...........+......................+ ... .............++.+.+++.+||+.+|++|
T Consensus 200 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 279 (328)
T cd07856 200 LEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKR 279 (328)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhC
Confidence 999999987655443333221111110100000000000000 000 00000001111346789999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001142 1121 PTAGDLYEMFVART 1134 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ 1134 (1142)
||+++++.|+|+..
T Consensus 280 ~t~~ell~~~~~~~ 293 (328)
T cd07856 280 ISAAEALAHPYLAP 293 (328)
T ss_pred CCHHHHhcCCcccc
Confidence 99999999999864
No 371
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=6.4e-32 Score=330.59 Aligned_cols=282 Identities=25% Similarity=0.341 Sum_probs=197.6
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+.+|+..+.||+||||.||+++. ++..+|+|-..++. ..... ..+.+|+..+++|+|||||++|..+.+..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~---s~~~~----skI~rEVk~LArLnHpNVVRYysAWVEs~ 550 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA---SDKLY----SKILREVKLLARLNHPNVVRYYSAWVEST 550 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch---HHHHH----HHHHHHHHHHhhcCCcceeeeehhhhccC
Confidence 45679999999999999999997 68888888755442 11222 33479999999999999999997765321
Q ss_pred CC-C--------------C----------------------------------C---------------------CC---
Q 001142 884 WL-P--------------S----------------------------------A---------------------DG--- 890 (1142)
Q Consensus 884 ~~-~--------------~----------------------------------~---------------------~~--- 890 (1142)
.- + . . ++
T Consensus 551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~ 630 (1351)
T KOG1035|consen 551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL 630 (1351)
T ss_pred CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence 10 0 0 0 00
Q ss_pred --------------------------C-Cc-----cccceEEEEEeccCCCCHHHHHHHHhccCCCCC-CHHHHHHHHHH
Q 001142 891 --------------------------N-PE-----HHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHV-SVKLALFIAQD 937 (1142)
Q Consensus 891 --------------------------~-~~-----~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~l-s~~~i~~Ia~q 937 (1142)
+ .+ .....+||-||||+..+|.+++++ +... .....++++++
T Consensus 631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~-----N~~~~~~d~~wrLFre 705 (1351)
T KOG1035|consen 631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR-----NHFNSQRDEAWRLFRE 705 (1351)
T ss_pred ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh-----cccchhhHHHHHHHHH
Confidence 0 00 012458999999997777777765 1222 47889999999
Q ss_pred HHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCccccc----c---cccccccccC-CCCCCCCccCC
Q 001142 938 VAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLR----S---FLHTCCIAHR-GIPAPDVCVGT 1009 (1142)
Q Consensus 938 Ia~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~----~---~~~~~~~~~~-~~~~~~~~~GT 1009 (1142)
|+.||.|+|++|||||||||.||+++.+ ..|||+|||+|+... . ....+..... ........+||
T Consensus 706 IlEGLaYIH~~giIHRDLKP~NIFLd~~-------~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGT 778 (1351)
T KOG1035|consen 706 ILEGLAYIHDQGIIHRDLKPRNIFLDSR-------NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGT 778 (1351)
T ss_pred HHHHHHHHHhCceeeccCCcceeEEcCC-------CCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccce
Confidence 9999999999999999999999999977 789999999998722 0 0010111111 11134567899
Q ss_pred CcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccC
Q 001142 1010 PRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSG 1089 (1142)
Q Consensus 1010 ~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~ 1089 (1142)
..|+|||++.+... ..|+.|+|+||+|||++||+ +||. +.++....+..-+.+.++..
T Consensus 779 alYvAPEll~~~~~-~~Yn~KiDmYSLGIVlFEM~---yPF~--TsMERa~iL~~LR~g~iP~~---------------- 836 (1351)
T KOG1035|consen 779 ALYVAPELLSDTSS-NKYNSKIDMYSLGIVLFEML---YPFG--TSMERASILTNLRKGSIPEP---------------- 836 (1351)
T ss_pred eeeecHHHhccccc-ccccchhhhHHHHHHHHHHh---ccCC--chHHHHHHHHhcccCCCCCC----------------
Confidence 99999999987432 47999999999999999998 4565 33443333333333333221
Q ss_pred CCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1090 SGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1090 ~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
++......+.-..+|++|++.||.+||||.|+|++=++-
T Consensus 837 -----~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 837 -----ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred -----cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 000112333457789999999999999999999876554
No 372
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=4.4e-31 Score=288.69 Aligned_cols=245 Identities=30% Similarity=0.358 Sum_probs=193.7
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 815 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 815 LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
||+|+||.||++.+. +..+++|+....... .......+ ..|+.++++++||||+++++.+....
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~--------- 66 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKII-KRKEVEHT----LTERNILSRINHPFIVKLHYAFQTEE--------- 66 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhc-chHHHHHH----HHHHHHHHHcCCCcHHHHHHHeecCC---------
Confidence 799999999999984 667788875433211 11223333 78999999999999999999887654
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 972 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~ 972 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+++|+||+|+||+++.+
T Consensus 67 -----~~~~v~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~------- 129 (250)
T cd05123 67 -----KLYLVLEYAPGGELFSHLSK-----EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD------- 129 (250)
T ss_pred -----eeEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC-------
Confidence 34999999999999999976 2368999999999999999999999999999999999999887
Q ss_pred CeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001142 973 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1052 (1142)
Q Consensus 973 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~ 1052 (1142)
+.++|+|||.+....... .......++..|+|||...+ ..++.++|+||||+++|+|++|+.||..
T Consensus 130 ~~~~l~d~~~~~~~~~~~----------~~~~~~~~~~~~~~Pe~~~~----~~~~~~~D~~slG~~~~~l~~g~~p~~~ 195 (250)
T cd05123 130 GHIKLTDFGLAKELSSEG----------SRTNTFCGTPEYLAPEVLLG----KGYGKAVDWWSLGVLLYEMLTGKPPFYA 195 (250)
T ss_pred CcEEEeecCcceecccCC----------CcccCCcCCccccChHHhCC----CCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 789999999987643321 01123457889999999875 4467899999999999999999999987
Q ss_pred CCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH---HHHHHH
Q 001142 1053 LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA---GDLYEM 1129 (1142)
Q Consensus 1053 ~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa---~EVL~~ 1129 (1142)
.+..+....+.... ...+ ...+..+.+++.+||..||++||++ .++++|
T Consensus 196 ~~~~~~~~~~~~~~-~~~~---------------------------~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 196 EDRKEIYEKILKDP-LRFP---------------------------EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred CCHHHHHHHHhcCC-CCCC---------------------------CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 66555544443321 1111 0235568999999999999999999 899999
Q ss_pred HHh
Q 001142 1130 FVA 1132 (1142)
Q Consensus 1130 L~~ 1132 (1142)
+||
T Consensus 248 ~~f 250 (250)
T cd05123 248 PFF 250 (250)
T ss_pred CCC
Confidence 986
No 373
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=310.25 Aligned_cols=254 Identities=24% Similarity=0.312 Sum_probs=203.8
Q ss_pred eeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCC
Q 001142 812 CDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 812 ~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
.++||.|-||+||-|++ .++.||||+.. +..........+ ..|++||.+++||.||.+...|++.+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvId--KlrFp~kqesql----R~EVaILq~l~HPGiV~le~M~ET~er----- 637 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVID--KLRFPTKQESQL----RNEVAILQNLHHPGIVNLECMFETPER----- 637 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeee--cccCCCchHHHH----HHHHHHHHhcCCCCeeEEEEeecCCce-----
Confidence 48899999999999987 57888998843 333333333344 799999999999999999999987664
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
.++|||-+. |+...+|-. ....++++...+.++.||+.||.|||-++|+|+||||+|||+...
T Consensus 638 ---------vFVVMEKl~-GDMLEMILS---sEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~---- 700 (888)
T KOG4236|consen 638 ---------VFVVMEKLH-GDMLEMILS---SEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA---- 700 (888)
T ss_pred ---------EEEEehhhc-chHHHHHHH---hhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC----
Confidence 499999997 555555533 234679999999999999999999999999999999999999765
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
....++||||||+|+.+.+.. -....+|||.|.|||++.. ..|+..-|+||.|||+|--++|..|
T Consensus 701 ~~FPQvKlCDFGfARiIgEks-----------FRrsVVGTPAYLaPEVLrn----kGyNrSLDMWSVGVIiYVsLSGTFP 765 (888)
T KOG4236|consen 701 SPFPQVKLCDFGFARIIGEKS-----------FRRSVVGTPAYLAPEVLRN----KGYNRSLDMWSVGVIIYVSLSGTFP 765 (888)
T ss_pred CCCCceeeccccceeecchhh-----------hhhhhcCCccccCHHHHhh----ccccccccceeeeEEEEEEeccccc
Confidence 344789999999999876532 1235689999999999987 6789999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 001142 1050 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEM 1129 (1142)
Q Consensus 1050 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~ 1129 (1142)
|... .++.++|+.......+..|. ++++...+||..+|+..-.+|.|.+..+.|
T Consensus 766 FNEd--EdIndQIQNAaFMyPp~PW~------------------------eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 766 FNED--EDINDQIQNAAFMYPPNPWS------------------------EISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred CCCc--cchhHHhhccccccCCCchh------------------------hcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 9743 34566665443322221111 566779999999999999999999999999
Q ss_pred HHhhc
Q 001142 1130 FVART 1134 (1142)
Q Consensus 1130 L~~~~ 1134 (1142)
+|.+.
T Consensus 820 ~Wlq~ 824 (888)
T KOG4236|consen 820 PWLQD 824 (888)
T ss_pred hhhhc
Confidence 99874
No 374
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.1e-31 Score=298.33 Aligned_cols=266 Identities=27% Similarity=0.389 Sum_probs=201.4
Q ss_pred CcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhh--CCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~--L~HpNIVkl~g~~~~~~~~ 885 (1142)
+..+.+.||+|.||.||+|+|.+..||||+|.-. ++ + ++.+|.+|... |+|+||..|++.-..+.
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr------dE-~----SWfrEtEIYqTvmLRHENILgFIaaD~~~~-- 278 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSR------DE-R----SWFRETEIYQTVMLRHENILGFIAADNKDN-- 278 (513)
T ss_pred eeEEEEEecCccccceeeccccCCceEEEEeccc------ch-h----hhhhHHHHHHHHHhccchhhhhhhccccCC--
Confidence 4689999999999999999999999999998522 11 1 22466666654 59999999998755432
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CccccCCCC
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------HIMHRDIKS 957 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~--------gIvHrDLKp 957 (1142)
....++|||++|.+.|||+|++.+ ..++....++++..+|.||+|||.. .|.|||||+
T Consensus 279 --------gs~TQLwLvTdYHe~GSL~DyL~r------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS 344 (513)
T KOG2052|consen 279 --------GSWTQLWLVTDYHEHGSLYDYLNR------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS 344 (513)
T ss_pred --------CceEEEEEeeecccCCcHHHHHhh------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence 235689999999999999999986 4689999999999999999999952 499999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC--CchhhHHH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY--GLEVDIWS 1035 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~--s~ksDVwS 1035 (1142)
.||||..+ +++-|+|+|+|......... -....+..+||..|||||++........+ -..+||||
T Consensus 345 KNILVKkn-------~~C~IADLGLAv~h~~~t~~------idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYa 411 (513)
T KOG2052|consen 345 KNILVKKN-------GTCCIADLGLAVRHDSDTDT------IDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYA 411 (513)
T ss_pred ccEEEccC-------CcEEEeeceeeEEecccCCc------ccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHH
Confidence 99999988 89999999999876554322 11234567899999999999764322222 25799999
Q ss_pred HHHHHHHHHhC----------CCCCCC-----CCHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhhh
Q 001142 1036 YGCLLLELLTL----------QVPYMG-----LSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAEL 1099 (1142)
Q Consensus 1036 LGviL~ELLtG----------~~Pf~~-----~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1142)
||.|+||++-+ +.||.+ .+..++.+.+ .+..+|.++..+. ..
T Consensus 412 fgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~----------------------s~ 469 (513)
T KOG2052|consen 412 FGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWK----------------------SD 469 (513)
T ss_pred HHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCcccc----------------------cC
Confidence 99999999853 567754 2233343333 2233343332221 22
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1100 ETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1100 ~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+....+.++++.||..+|..|-||--+-+.+-...+
T Consensus 470 ~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 470 PALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 666778999999999999999999888777766553
No 375
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-32 Score=310.39 Aligned_cols=267 Identities=25% Similarity=0.299 Sum_probs=223.1
Q ss_pred CCCCCCCCCcceeeeecccCceEEEEEEECCcc--EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 800 GLDPGSFPSLSSCDEAGKSVSSSLFRCKFGSAD--AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 800 ~~~~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~--vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
.+....+.+++....||-|+||.|-++..+.+. .|+|+.+.+...+. .+.+. +..|-.||...+.|.||++|.
T Consensus 413 e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdt-kQqeH----v~sEr~Im~~~~s~fIvrLYr 487 (732)
T KOG0614|consen 413 EFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDT-KQQEH----VFSERNIMMECRSDFIVRLYR 487 (732)
T ss_pred hhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccch-hHHHH----HHhHHHHHHhcCchHHHHHHH
Confidence 445667788899999999999999999887665 57776433322222 22222 258999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
.|.++.++ |++||-|-||.|+..+++ ++.|+...++.++..++.|++|||++|||+|||||
T Consensus 488 Tfrd~kyv--------------YmLmEaClGGElWTiLrd-----Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKP 548 (732)
T KOG0614|consen 488 TFRDSKYV--------------YMLMEACLGGELWTILRD-----RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKP 548 (732)
T ss_pred Hhccchhh--------------hhhHHhhcCchhhhhhhh-----cCCcccchhhhhHHHHHHHHHHHHhcCceeccCCh
Confidence 99887755 999999999999999987 46899999999999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
+|.|++.+ |.+||.|||+|+.+....+++ +++|||.|.|||++.. ...+.++|.||||
T Consensus 549 ENllLd~~-------Gy~KLVDFGFAKki~~g~KTw-----------TFcGTpEYVAPEIILn----KGHD~avDyWaLG 606 (732)
T KOG0614|consen 549 ENLLLDNR-------GYLKLVDFGFAKKIGSGRKTW-----------TFCGTPEYVAPEIILN----KGHDRAVDYWALG 606 (732)
T ss_pred hheeeccC-------CceEEeehhhHHHhccCCcee-----------eecCCcccccchhhhc----cCcchhhHHHHHH
Confidence 99999988 899999999999887766554 6789999999999987 5567999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1038 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+++|||++|.+||.+.+++..+..|..+.... . .+..+.....++++++...+|
T Consensus 607 Ili~ELL~G~pPFs~~dpmktYn~ILkGid~i-----~---------------------~Pr~I~k~a~~Lik~LCr~~P 660 (732)
T KOG0614|consen 607 ILIYELLTGSPPFSGVDPMKTYNLILKGIDKI-----E---------------------FPRRITKTATDLIKKLCRDNP 660 (732)
T ss_pred HHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-----h---------------------cccccchhHHHHHHHHHhcCc
Confidence 99999999999999999999988887664211 0 011455668899999999999
Q ss_pred CCCCC-----HHHHHHHHHhhcCCCC
Q 001142 1118 TERPT-----AGDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1118 ~~RPS-----a~EVL~~L~~~~ss~~ 1138 (1142)
.+|.. +.+|-+|-||..-.+.
T Consensus 661 ~ERLG~~~~gI~DIkkH~Wf~gfdwe 686 (732)
T KOG0614|consen 661 TERLGYQKGGINDIKKHRWFEGFDWE 686 (732)
T ss_pred HhhhccccCChHHHHhhhhhhcCChh
Confidence 99975 8999999999876543
No 376
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=305.62 Aligned_cols=264 Identities=22% Similarity=0.331 Sum_probs=203.9
Q ss_pred CCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
..+.+.++||+|-||.|.++...+ ..||||+.+-.. ......+| .+|+++|.+++|||||+++|+|..++.+
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a---~~~~r~~F----~kEIkiLsqLkhPNIveLvGVC~~DePi 610 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA---TKNARNDF----LKEIKILSRLKHPNIVELLGVCVQDDPL 610 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCccc---chhHHHHH----HHHHHHHhccCCCCeeEEEeeeecCCch
Confidence 446899999999999999999865 788888754221 22333445 8999999999999999999999987755
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
++||||+++|+|.+++..... ..........|+.||+.|++||.+-++|||||.+.|+|++.+
T Consensus 611 --------------cmI~EYmEnGDLnqFl~ahea---pt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e 673 (807)
T KOG1094|consen 611 --------------CMITEYMENGDLNQFLSAHEL---PTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGE 673 (807)
T ss_pred --------------HHHHHHHhcCcHHHHHHhccC---cccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCc
Confidence 999999999999999987321 124556677899999999999999999999999999999988
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+++||+|||+++.+-..... ......+-...|||||.+.- ..++.++|||+||+++||+++
T Consensus 674 -------~~iKiadfgmsR~lysg~yy--------~vqgr~vlpiRwmawEsill----gkFttaSDvWafgvTlwE~~~ 734 (807)
T KOG1094|consen 674 -------FTIKIADFGMSRNLYSGDYY--------RVQGRAVLPIRWMAWESILL----GKFTTASDVWAFGVTLWEVFM 734 (807)
T ss_pred -------ccEEecCcccccccccCCce--------eeecceeeeeeehhHHHHHh----ccccchhhhhhhHHHHHHHHH
Confidence 89999999999865432211 11223456788999999876 678999999999999999877
Q ss_pred --CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1046 --LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1046 --G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
...||......++.+.....-...-.. + ....+.-++..+.+++.+||..|-.+||++
T Consensus 735 ~C~e~Py~~lt~e~vven~~~~~~~~~~~------------~--------~l~~P~~cp~~lyelml~Cw~~es~~RPsF 794 (807)
T KOG1094|consen 735 LCREQPYSQLTDEQVVENAGEFFRDQGRQ------------V--------VLSRPPACPQGLYELMLRCWRRESEQRPSF 794 (807)
T ss_pred HHhhCchhhhhHHHHHHhhhhhcCCCCcc------------e--------eccCCCcCcHHHHHHHHHHhchhhhcCCCH
Confidence 678998777766655432211100000 0 001112567789999999999999999999
Q ss_pred HHHHHHHHhh
Q 001142 1124 GDLYEMFVAR 1133 (1142)
Q Consensus 1124 ~EVL~~L~~~ 1133 (1142)
+++..++...
T Consensus 795 e~lh~~lq~~ 804 (807)
T KOG1094|consen 795 EQLHLFLQED 804 (807)
T ss_pred HHHHHHHHHh
Confidence 9998877643
No 377
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-30 Score=293.96 Aligned_cols=268 Identities=22% Similarity=0.335 Sum_probs=200.2
Q ss_pred CCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHh--hCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLG--ALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~--~L~HpNIVkl~g~~~~~~ 883 (1142)
.....+.++||+|.||.||+|...++.||||++.. .+.+.| ..|-+|.+ .++|+||++|+++-....
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~-------~~kqs~----~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t 277 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE-------QEKQSF----QNEKNIYSLPGMKHENILQFIGAEKRGT 277 (534)
T ss_pred CCchhhHHHhhcCccceeehhhccCceeEEEecCH-------HHHHHH----HhHHHHHhccCccchhHHHhhchhccCC
Confidence 45678899999999999999999999999999753 334444 55655554 557999999998754321
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---------CccccC
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---------HIMHRD 954 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~---------gIvHrD 954 (1142)
. ....++||+||.+.|||.+++.. ..++|....+|+..|++||+|||+. .|+|||
T Consensus 278 ---------~-~~~eywLVt~fh~kGsL~dyL~~------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRD 341 (534)
T KOG3653|consen 278 ---------A-DRMEYWLVTEFHPKGSLCDYLKA------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRD 341 (534)
T ss_pred ---------c-cccceeEEeeeccCCcHHHHHHh------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcccccc
Confidence 1 13467999999999999999986 4699999999999999999999962 699999
Q ss_pred CCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC--CCCchhh
Q 001142 955 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVD 1032 (1142)
Q Consensus 955 LKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksD 1032 (1142)
||+.||||..+ .++.|+|||+|..+...... ......+||..|||||++.+...-. ..=.++|
T Consensus 342 lkSkNVLvK~D-------lTccIaDFGLAl~~~p~~~~--------~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~D 406 (534)
T KOG3653|consen 342 LKSKNVLVKND-------LTCCIADFGLALRLEPGKPQ--------GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRID 406 (534)
T ss_pred ccccceEEccC-------CcEEeeccceeEEecCCCCC--------cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHH
Confidence 99999999988 89999999999887643211 1112358999999999998743211 1115699
Q ss_pred HHHHHHHHHHHHhCCCCCC-C----------------CCHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCC
Q 001142 1033 IWSYGCLLLELLTLQVPYM-G----------------LSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEK 1094 (1142)
Q Consensus 1033 VwSLGviL~ELLtG~~Pf~-~----------------~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~ 1094 (1142)
|||+|.|||||+++..-+. + .+..++...+ ....+|.+++.+..
T Consensus 407 vYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~------------------ 468 (534)
T KOG3653|consen 407 VYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRK------------------ 468 (534)
T ss_pred HHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhc------------------
Confidence 9999999999998754332 1 1222333333 44445555543321
Q ss_pred chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 001142 1095 PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1095 ~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ss~ 1137 (1142)
......+.+.+..||..||+.|.||.=|-+.++.....+
T Consensus 469 ----h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 469 ----HAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred ----CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 144567899999999999999999988877776654433
No 378
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=2.2e-32 Score=288.50 Aligned_cols=266 Identities=24% Similarity=0.318 Sum_probs=204.6
Q ss_pred CCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~ 885 (1142)
++++-...||.|+||+|++..++.....++++++..... ..+. .+++.|.+...+- +.||||++||....++
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq----~rll~e~d~~mks~~cp~IVkfyGa~F~EG-- 136 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQ----KRLLMEHDTVMKSSNCPNIVKFYGALFSEG-- 136 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHH----HHHHHHHHHHHhhcCCcHHHHHhhhhhcCC--
Confidence 445667889999999999999876555555555554333 2222 3447888776655 6999999999977554
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeeecc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILIDL 964 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NILld~ 964 (1142)
..||.||+|+ .||..+.+..+.-....+++...-.|+.-.+.||.||-. ..|||||+||+|||++.
T Consensus 137 ------------dcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr 203 (361)
T KOG1006|consen 137 ------------DCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR 203 (361)
T ss_pred ------------ceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec
Confidence 2499999997 888887766555555679999999999999999999985 58999999999999998
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
. |.|||||||.+..+..... ...-+|-..|||||.+.... ..|+-++||||||++|||++
T Consensus 204 ~-------G~vKLCDFGIcGqLv~SiA-----------kT~daGCrpYmAPERi~p~~--~gyDiRSDvWSLGITL~EvA 263 (361)
T KOG1006|consen 204 H-------GDVKLCDFGICGQLVDSIA-----------KTVDAGCRPYMAPERIDPSD--KGYDIRSDVWSLGITLYEVA 263 (361)
T ss_pred C-------CCEeeecccchHhHHHHHH-----------hhhccCCccccChhccCCcc--CCcchhhhhhhhcceEeeee
Confidence 8 8899999999976544221 12336888899999987633 46899999999999999999
Q ss_pred hCCCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 TLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
||..|+.+.+ ..+....+..+.+|.+...... .+.+..+..+|..||..|-..||..
T Consensus 264 tG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~----------------------~~~s~~~~~fintCl~Kd~~~Rpky 321 (361)
T KOG1006|consen 264 TGNFPYRKWDSVFEQLCQVVIGDPPILLFDKEC----------------------VHYSFSMVRFINTCLIKDRSDRPKY 321 (361)
T ss_pred cCCCCcchHHHHHHHHHHHHcCCCCeecCcccc----------------------cccCHHHHHHHHHHhhcccccCcch
Confidence 9999998643 2334455566665554332211 2567789999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001142 1124 GDLYEMFVART 1134 (1142)
Q Consensus 1124 ~EVL~~L~~~~ 1134 (1142)
.++.+++|-+.
T Consensus 322 ~~Lk~~~fyr~ 332 (361)
T KOG1006|consen 322 DDLKKFPFYRM 332 (361)
T ss_pred hhhhcCchhhh
Confidence 99999988653
No 379
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-31 Score=312.07 Aligned_cols=212 Identities=25% Similarity=0.368 Sum_probs=169.3
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..|..-+.||+||||.||++++ .|..+|||.++.. ....+ .+ +..+|+++|++++|||||++++.-++...
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~--~~~r~-~e----~~~~EieilkKLnh~NIVk~f~iee~~~~ 85 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKE--SSLRP-RE----RWCREIEILKKLNHPNIVKLFDIEETKFL 85 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhh--cccch-HH----HHHHHHHHHHHcCchhhhhhcccCCcccc
Confidence 4467789999999999999997 5677888875432 22212 12 23689999999999999999987654321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+.-.....+|||||.||||...+++ ......+++.+.+.++.++..||.|||++|||||||||.||++..
T Consensus 86 --------~~~~~~~vlvmEyC~gGsL~~~L~~--PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~ 155 (732)
T KOG4250|consen 86 --------GLVTRLPVLVMEYCSGGSLRKVLNS--PENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQI 155 (732)
T ss_pred --------CcccccceEEEeecCCCcHHHHhcC--cccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEee
Confidence 0112245899999999999999986 334457999999999999999999999999999999999998854
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
.. ++.-..||+|||+|+.+.+... -...+||+.|.+||.+.. ...|+..+|.|||||++|+++
T Consensus 156 Ge---dgq~IyKLtDfG~Arel~d~s~-----------~~S~vGT~~YLhPel~E~---q~~y~~tVDLWS~GvtlY~ca 218 (732)
T KOG4250|consen 156 GE---DGQSIYKLTDFGAARELDDNSL-----------FTSLVGTEEYLHPELYER---QKKYTATVDLWSFGVTLYECA 218 (732)
T ss_pred cC---CCceEEeeecccccccCCCCCe-----------eeeecCchhhcChHHHhh---ccCcCceeehhhhhhHHHHHh
Confidence 31 2446789999999998776432 235689999999999874 367899999999999999999
Q ss_pred hCCCCCCC
Q 001142 1045 TLQVPYMG 1052 (1142)
Q Consensus 1045 tG~~Pf~~ 1052 (1142)
||..||..
T Consensus 219 TG~lPF~p 226 (732)
T KOG4250|consen 219 TGELPFIP 226 (732)
T ss_pred ccCCCCCc
Confidence 99999953
No 380
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=7.7e-31 Score=306.48 Aligned_cols=242 Identities=26% Similarity=0.267 Sum_probs=193.5
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 881 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~ 881 (1142)
..+.|++...+|.|+|+.|-.+.+ .+...+||+..-. .... .+|+.++... +||||+++.+.+.+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~----------~~e~~~~~~~~~h~niv~~~~v~~~ 387 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--ADDN----------QDEIPISLLVRDHPNIVKSHDVYED 387 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc--cccc----------ccccchhhhhcCCCcceeecceecC
Confidence 456799999999999999999987 4566788875322 1111 3677777666 69999999999886
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. +.|+|||++.|+-+.+.+.. .+.....+..|+++|+.|+.|||++|||||||||+|||
T Consensus 388 ~~--------------~~~~v~e~l~g~ell~ri~~------~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL 447 (612)
T KOG0603|consen 388 GK--------------EIYLVMELLDGGELLRRIRS------KPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNIL 447 (612)
T ss_pred Cc--------------eeeeeehhccccHHHHHHHh------cchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhhee
Confidence 54 45999999999888777765 12333778889999999999999999999999999999
Q ss_pred ec-cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 962 ID-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 962 ld-~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
++ .. ++++|+|||.++..... ....+-|..|.|||++.. ..|++++||||||++|
T Consensus 448 ~~~~~-------g~lrltyFG~a~~~~~~-------------~~tp~~t~~y~APEvl~~----~~yt~acD~WSLGvlL 503 (612)
T KOG0603|consen 448 LDGSA-------GHLRLTYFGFWSELERS-------------CDTPALTLQYVAPEVLAI----QEYTEACDWWSLGVLL 503 (612)
T ss_pred ecCCC-------CcEEEEEechhhhCchh-------------hcccchhhcccChhhhcc----CCCCcchhhHHHHHHH
Confidence 95 44 88999999999765542 113346889999999874 6899999999999999
Q ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+|++|+.||...... ++...+..+.. . ...++..++|++.||+.||.+
T Consensus 504 y~ML~G~tp~~~~P~~~ei~~~i~~~~~---s---------------------------~~vS~~AKdLl~~LL~~dP~~ 553 (612)
T KOG0603|consen 504 YEMLTGRTLFAAHPAGIEIHTRIQMPKF---S---------------------------ECVSDEAKDLLQQLLQVDPAL 553 (612)
T ss_pred HHHHhCCCccccCCchHHHHHhhcCCcc---c---------------------------cccCHHHHHHHHHhccCChhh
Confidence 9999999999865443 44444433221 1 266778999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001142 1120 RPTAGDLYEMFVA 1132 (1142)
Q Consensus 1120 RPSa~EVL~~L~~ 1132 (1142)
||++.++..|+|+
T Consensus 554 Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 554 RLGADEIGAHPWF 566 (612)
T ss_pred CcChhhhccCcch
Confidence 9999999999999
No 381
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-31 Score=292.60 Aligned_cols=285 Identities=20% Similarity=0.234 Sum_probs=203.3
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C-CC----ccceeee
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H-SC----IVEMYGH 878 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H-pN----IVkl~g~ 878 (1142)
.+|.+...+|+|+||.|-.+.+. +..+|+||.+ ....+....+-|++++.++. + |+ +|++.++
T Consensus 89 ~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik---------~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~w 159 (415)
T KOG0671|consen 89 NRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIK---------NVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDW 159 (415)
T ss_pred cceehhhhhcCCcccceEEEeecCCCceehHHHHH---------HHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehh
Confidence 57999999999999999999874 4567777632 12223333467999999994 2 33 6777777
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
|.-.+ +.|||+|.+ |-|+.+++.. ++..+++...++.|++|++.+++|||+.+++|.||||+
T Consensus 160 Fdyrg--------------hiCivfell-G~S~~dFlk~---N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPE 221 (415)
T KOG0671|consen 160 FDYRG--------------HICIVFELL-GLSTFDFLKE---NNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPE 221 (415)
T ss_pred hhccC--------------ceEEEEecc-ChhHHHHhcc---CCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChh
Confidence 76544 459999999 5799999976 56678999999999999999999999999999999999
Q ss_pred Ceeeccccc-------------cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC
Q 001142 959 NILIDLERK-------------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN 1025 (1142)
Q Consensus 959 NILld~~~~-------------~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 1025 (1142)
|||+..... .......|+++|||.|+..... ....+.|..|+|||++.+ -
T Consensus 222 NILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-------------hs~iVsTRHYRAPEViLg----L 284 (415)
T KOG0671|consen 222 NILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-------------HSTIVSTRHYRAPEVILG----L 284 (415)
T ss_pred eEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC-------------cceeeeccccCCchheec----c
Confidence 998854320 1122467999999999754331 124578999999999997 6
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhh-cc---------ccc-------cccccc
Q 001142 1026 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL-GS---------CHE-------HEVAQS 1088 (1142)
Q Consensus 1026 ~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~-~~---------~~~-------~~~~~~ 1088 (1142)
.++.++||||+||||.|+.||...|+..+..+-...+.....|......... .. |.+ ..+.+.
T Consensus 285 GwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ 364 (415)
T KOG0671|consen 285 GWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEP 364 (415)
T ss_pred CcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcC
Confidence 7899999999999999999999999876655533333332222222211111 00 000 000000
Q ss_pred CCCCCC-chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1089 GSGFEK-PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1089 ~~~~~~-~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
..+... ..........|.+|+++||..||.+|+|+.|++.|+||...
T Consensus 365 ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 365 CKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred CccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 000000 00112344569999999999999999999999999999864
No 382
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=1.4e-29 Score=310.16 Aligned_cols=292 Identities=14% Similarity=0.103 Sum_probs=177.8
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
...++|++.++||+|+||.||+|++. +..+|+|.. ... ... +.. ..| .+....+.+++.++.
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~--~~~--~~~--e~~----~~e--~l~~~~~~~~~~~~~ 196 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKA--TEY--GAV--EIW----MNE--RVRRACPNSCADFVY 196 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEe--ccc--chh--HHH----HHH--HHHhhchhhHHHHHH
Confidence 45678999999999999999999984 446777753 221 111 111 111 122223344444333
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc---------------CCCCCCHHHHHHHHHHHHHHH
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---------------GEKHVSVKLALFIAQDVAAAL 942 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~---------------~~~~ls~~~i~~Ia~qIa~gL 942 (1142)
.+..... .......++||||+++++|.++++..... .........+..|+.||+.||
T Consensus 197 ~~~~~~~--------~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL 268 (566)
T PLN03225 197 GFLEPVS--------SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFAL 268 (566)
T ss_pred hhhcccc--------cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHH
Confidence 3221110 01223569999999999999998752100 001122345678999999999
Q ss_pred HHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc
Q 001142 943 VELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH 1022 (1142)
Q Consensus 943 ~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1022 (1142)
.|||+++|+||||||+|||++.+. +.+||+|||+|+.+..... .......+|+.|+|||.+....
T Consensus 269 ~yLH~~gIiHRDLKP~NILl~~~~------~~~KL~DFGlA~~l~~~~~---------~~~~~~~~t~~Y~APE~~~~~~ 333 (566)
T PLN03225 269 DGLHSTGIVHRDVKPQNIIFSEGS------GSFKIIDLGAAADLRVGIN---------YIPKEFLLDPRYAAPEQYIMST 333 (566)
T ss_pred HHHHHCCEEeCcCCHHHEEEeCCC------CcEEEEeCCCccccccccc---------cCCcccccCCCccChHHhhccC
Confidence 999999999999999999998542 6799999999975433211 1223456899999999764321
Q ss_pred CC------------------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccccc
Q 001142 1023 KP------------------NLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHE 1084 (1142)
Q Consensus 1023 ~~------------------~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~ 1084 (1142)
.. ..++.++|||||||++|||+++..|+.. ........+.........+. .... ...
T Consensus 334 ~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~-~~~~~~~~l~~~~~~~~~~~-~~~~---~~~ 408 (566)
T PLN03225 334 QTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS-NLIQFNRQLKRNDYDLVAWR-KLVE---PRA 408 (566)
T ss_pred CCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch-HHHHHHHHHHhcCCcHHHHH-Hhhc---ccc
Confidence 10 1244577999999999999997766542 12222223322221111100 0000 000
Q ss_pred ccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCCC
Q 001142 1085 VAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1085 ~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ss~~ 1138 (1142)
.......+... ........+|+.+||+.||.+|||+.|+++|+|+......
T Consensus 409 ~~~~~~~~~~~---d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~~ 459 (566)
T PLN03225 409 SPDLRRGFEVL---DLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGLL 459 (566)
T ss_pred chhhhhhhhhc---cccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCcc
Confidence 00000000000 0123346789999999999999999999999999876554
No 383
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=7.5e-30 Score=300.35 Aligned_cols=253 Identities=23% Similarity=0.318 Sum_probs=204.7
Q ss_pred cceeeeecccCceEEEEEEEC------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
....++||+|+||+||+|.|- +.+||+|++.-. .......++ ++|+.+|.++.||||++++|++..+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~---t~~~~s~e~----LdeAl~masldHpnl~RLLgvc~~s 770 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF---TSPKASIEL----LDEALRMASLDHPNLLRLLGVCMLS 770 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeecc---CCchhhHHH----HHHHHHHhcCCCchHHHHhhhcccc
Confidence 467799999999999999982 346777765322 222333444 7999999999999999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. +.||++|+|.|+|.++++.. +..+-.+..+.|..|||+||.|||.+++|||||-+.||||
T Consensus 771 ~---------------~qlvtq~mP~G~LlDyvr~h----r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV 831 (1177)
T KOG1025|consen 771 T---------------LQLVTQLMPLGCLLDYVREH----RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV 831 (1177)
T ss_pred h---------------HHHHHHhcccchHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee
Confidence 3 37999999999999999863 3568889999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
..- ..+|+.|||+|+.+......... ....-.+.|||-|.+.. ..|+.++|||||||++||
T Consensus 832 ksP-------~hvkitdfgla~ll~~d~~ey~~--------~~gK~pikwmale~i~~----~~~thqSDVWsfGVtiWE 892 (1177)
T KOG1025|consen 832 KSP-------NHVKITDFGLAKLLAPDEKEYSA--------PGGKVPIKWMALESIRI----RKYTHQSDVWSFGVTIWE 892 (1177)
T ss_pred cCC-------CeEEEEecchhhccCcccccccc--------cccccCcHHHHHHHhhc----cCCCchhhhhhhhhhHHH
Confidence 876 78999999999887654432211 11123566999998875 689999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
++| |..|+.+.+..++.+.+..+.+..-+ ..++.++..++.+||..|+..||
T Consensus 893 lmTFGa~Py~gi~~~eI~dlle~geRLsqP---------------------------piCtiDVy~~mvkCwmid~~~rp 945 (1177)
T KOG1025|consen 893 LMTFGAKPYDGIPAEEIPDLLEKGERLSQP---------------------------PICTIDVYMVMVKCWMIDADSRP 945 (1177)
T ss_pred HHhcCCCccCCCCHHHhhHHHhccccCCCC---------------------------CCccHHHHHHHHHHhccCcccCc
Confidence 999 99999999999888888776652211 15566789999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001142 1122 TAGDLYEMFVAR 1133 (1142)
Q Consensus 1122 Sa~EVL~~L~~~ 1133 (1142)
+|+++...+-..
T Consensus 946 ~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 946 TFKELAEEFSRM 957 (1177)
T ss_pred cHHHHHHHHHHH
Confidence 999998866544
No 384
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=9.9e-30 Score=278.00 Aligned_cols=227 Identities=20% Similarity=0.144 Sum_probs=172.8
Q ss_pred cCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCCccc
Q 001142 818 SVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNPEHH 895 (1142)
Q Consensus 818 GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~~~~ 895 (1142)
|.+|.||+|++ .+..+|+|..... . .+ .+|...+....||||+++++++.+..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~--~-------~~----~~~~~~~~~~~~~~i~~~~~~~~~~~------------ 58 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKS--S-------EY----SRERLTIIPHCVPNMVCLHKYIVSED------------ 58 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecch--h-------hh----hhHHHHHHhcCCCceeehhhheecCC------------
Confidence 89999999998 4556777764321 1 11 24555555667999999999987644
Q ss_pred cceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeE
Q 001142 896 LLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVV 975 (1142)
Q Consensus 896 ~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~v 975 (1142)
..++||||+++++|.+++.. ...+++..+..++.|++.||+|||++||+||||||+||+++.+ +.+
T Consensus 59 --~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~-------~~~ 124 (237)
T cd05576 59 --SVFLVLQHAEGGKLWSHISK-----FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR-------GHI 124 (237)
T ss_pred --eEEEEEecCCCCCHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC-------CCE
Confidence 34999999999999999875 2358999999999999999999999999999999999999887 789
Q ss_pred EEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Q 001142 976 KLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSE 1055 (1142)
Q Consensus 976 KL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~ 1055 (1142)
+++|||.+....... ....++..|+|||++.. ..++.++||||+|+++|||++|..|+.....
T Consensus 125 ~l~df~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~il~el~~g~~~~~~~~~ 187 (237)
T cd05576 125 QLTYFSRWSEVEDSC-------------DGEAVENMYCAPEVGGI----SEETEACDWWSLGAILFELLTGKTLVECHPS 187 (237)
T ss_pred EEecccchhcccccc-------------ccCCcCccccCCcccCC----CCCCchhhHHHHHHHHHHHHHCcchhhcCch
Confidence 999999875443211 11235677999998764 4578899999999999999999988753211
Q ss_pred HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH-----HHHHHHH
Q 001142 1056 LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA-----GDLYEMF 1130 (1142)
Q Consensus 1056 ~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa-----~EVL~~L 1130 (1142)
. +....... .+...++.+.+++.+||+.||++||++ +++++|+
T Consensus 188 -~----~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~ 235 (237)
T cd05576 188 -G----INTHTTLN---------------------------IPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHP 235 (237)
T ss_pred -h----cccccccC---------------------------CcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCC
Confidence 0 00000000 001345668999999999999999996 9999998
Q ss_pred Hh
Q 001142 1131 VA 1132 (1142)
Q Consensus 1131 ~~ 1132 (1142)
|+
T Consensus 236 ~~ 237 (237)
T cd05576 236 FF 237 (237)
T ss_pred CC
Confidence 85
No 385
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-30 Score=288.35 Aligned_cols=280 Identities=21% Similarity=0.224 Sum_probs=214.8
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|-+.++||+|+|+.||+|.+ ....|||||-.+.+.. ..+..+++..-..+|.+|.+.|.||.||++|++|.-+..
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~W-rdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNW-RDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccch-hhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 3589999999999999999987 5778999997766432 223344566667899999999999999999999875432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--CccccCCCCCCeee
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--HIMHRDIKSENILI 962 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~--gIvHrDLKp~NILl 962 (1142)
.+|-|+|||+|.+|.-|++. ...+++++++.|+.||+.||.||.+. .|||-||||.|||+
T Consensus 542 -------------sFCTVLEYceGNDLDFYLKQ-----hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILL 603 (775)
T KOG1151|consen 542 -------------SFCTVLEYCEGNDLDFYLKQ-----HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILL 603 (775)
T ss_pred -------------cceeeeeecCCCchhHHHHh-----hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEE
Confidence 24999999999999999987 35789999999999999999999975 79999999999988
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
-... ..|.+||.|||+++.+...... ...+........||.+|.+||.+.-.......+.|+||||.|||+|.
T Consensus 604 v~Gt----acGeIKITDFGLSKIMdddSy~---~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQ 676 (775)
T KOG1151|consen 604 VNGT----ACGEIKITDFGLSKIMDDDSYN---SVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQ 676 (775)
T ss_pred ecCc----ccceeEeeecchhhhccCCccC---cccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhh
Confidence 5432 2378999999999987664432 22344455667899999999998765555678999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
.+.|+.||......+ +.+......... +...|.. ...+.+..+||++||++.-++|..
T Consensus 677 ClYGrKPFGhnqsQQ--dILqeNTIlkAt-------------------EVqFP~K-PvVsseAkaFIRRCLaYRKeDR~D 734 (775)
T KOG1151|consen 677 CLYGRKPFGHNQSQQ--DILQENTILKAT-------------------EVQFPPK-PVVSSEAKAFIRRCLAYRKEDRID 734 (775)
T ss_pred hhccCCCCCCchhHH--HHHhhhchhcce-------------------eccCCCC-CccCHHHHHHHHHHHHhhhhhhhh
Confidence 999999996532211 111111100000 0001110 145667899999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001142 1123 AGDLYEMFVART 1134 (1142)
Q Consensus 1123 a~EVL~~L~~~~ 1134 (1142)
..++..++++..
T Consensus 735 V~qLA~dpyllP 746 (775)
T KOG1151|consen 735 VQQLACDPYLLP 746 (775)
T ss_pred HHHHccCccccc
Confidence 999999988754
No 386
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=7.9e-29 Score=306.16 Aligned_cols=259 Identities=25% Similarity=0.410 Sum_probs=201.7
Q ss_pred CcceeeeecccCceEEEEEEEC----C---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeE
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG----S---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK 879 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~----~---~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~ 879 (1142)
+..+.+.||+|+||.|++|... . ..+.|+++.++..... .+.+.+ ..|+.+|+.+. ||||+.++|++
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~----~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDL----MSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHH----HHHHHHHHHhcCCcchhhheeee
Confidence 3467779999999999999742 1 1333444434443333 445555 89999999995 99999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHh---------ccCC--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLS---------ETGE--KHVSVKLALFIAQDVAAALVELHSK 948 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~---------~~~~--~~ls~~~i~~Ia~qIa~gL~yLHs~ 948 (1142)
.....+ ++|+||+..|+|.++++..+ .... ..++..+...++.|||.|++||++.
T Consensus 372 t~~~~~--------------~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~ 437 (609)
T KOG0200|consen 372 TQDGPL--------------YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV 437 (609)
T ss_pred ccCCce--------------EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence 875533 99999999999999998754 1111 1389999999999999999999999
Q ss_pred CccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccC--CCcccchhhhccccCCCC
Q 001142 949 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVG--TPRWMAPEVLRAMHKPNL 1026 (1142)
Q Consensus 949 gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~G--T~~Y~APE~l~~~~~~~~ 1026 (1142)
++|||||-+.|||+..+ ..+||+|||+|+.......... ....| ...|||||.+.. ..
T Consensus 438 ~~vHRDLAaRNVLi~~~-------~~~kIaDFGlar~~~~~~~y~~---------~~~~~~LP~kWmApEsl~~----~~ 497 (609)
T KOG0200|consen 438 PCVHRDLAARNVLITKN-------KVIKIADFGLARDHYNKDYYRT---------KSSAGTLPVKWMAPESLFD----RV 497 (609)
T ss_pred CccchhhhhhhEEecCC-------CEEEEccccceeccCCCCceEe---------cCCCCccceeecCHHHhcc----Cc
Confidence 99999999999999987 7899999999985433221100 01112 334999999986 67
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHH
Q 001142 1027 YGLEVDIWSYGCLLLELLT-LQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1104 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLt-G~~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1142)
|+.++|||||||+|||++| |..||.+.. ..++.+.+..|.+...+. .+.++
T Consensus 498 ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~---------------------------~c~~e 550 (609)
T KOG0200|consen 498 FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPE---------------------------HCSDE 550 (609)
T ss_pred ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCC---------------------------CCCHH
Confidence 9999999999999999999 899998755 556666777776644332 55677
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001142 1105 LVDVFRRCTEENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1105 L~dLI~~CL~~DP~~RPSa~EVL~~L~~ 1132 (1142)
+.+++..||+.+|++||++.++.+.+..
T Consensus 551 iY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 551 IYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred HHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 8999999999999999999999887655
No 387
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=7.6e-30 Score=264.00 Aligned_cols=280 Identities=20% Similarity=0.275 Sum_probs=205.1
Q ss_pred CCCCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceee
Q 001142 801 LDPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYG 877 (1142)
Q Consensus 801 ~~~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g 877 (1142)
++-+..++|++.+++|+|-|+.||.|.. +...+.+|+.+ +-..+.+ .+|+.||..|. ||||+++++
T Consensus 32 i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLK-------PVkkkKI----kREikIL~nL~gg~NIi~L~D 100 (338)
T KOG0668|consen 32 IDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILK-------PVKKKKI----KREIKILQNLRGGPNIIKLLD 100 (338)
T ss_pred eeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeec-------hHHHHHH----HHHHHHHHhccCCCCeeehhh
Confidence 3445678999999999999999999985 66778888743 1222333 79999999996 999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
...+...- ...||+||+.+.+...+... ++...++.++.+++.||.|+|++||+|||+||
T Consensus 101 iV~Dp~Sk------------tpaLiFE~v~n~Dfk~ly~t--------l~d~dIryY~~elLkALdyCHS~GImHRDVKP 160 (338)
T KOG0668|consen 101 IVKDPESK------------TPSLIFEYVNNTDFKQLYPT--------LTDYDIRYYIYELLKALDYCHSMGIMHRDVKP 160 (338)
T ss_pred hhcCcccc------------CchhHhhhhccccHHHHhhh--------hchhhHHHHHHHHHHHHhHHHhcCcccccCCc
Confidence 98875422 34899999998887776543 78889999999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
+|+|||... -.++|+|+|+|........ .+..+.+.+|.-||.+... ..|+..-|+||||
T Consensus 161 hNvmIdh~~------rkLrlIDWGLAEFYHp~~e-----------YnVRVASRyfKGPELLVdy---~~YDYSLD~WS~G 220 (338)
T KOG0668|consen 161 HNVMIDHEL------RKLRLIDWGLAEFYHPGKE-----------YNVRVASRYFKGPELLVDY---QMYDYSLDMWSLG 220 (338)
T ss_pred ceeeechhh------ceeeeeecchHhhcCCCce-----------eeeeeehhhcCCchheeec---hhccccHHHHHHH
Confidence 999998764 5799999999976543221 2345678889999998873 4678899999999
Q ss_pred HHHHHHHhCCCCCC-CCCHHHHHHHHHh-CCCCC-----------chhHHhhhcccccccccccCCCCCCchhhhhhHHH
Q 001142 1038 CLLLELLTLQVPYM-GLSELEIHDLIQM-GKRPR-----------LTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1104 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~-~~~~~el~~~I~~-~~~p~-----------l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1142)
|++..|+..+.||. +.+..+..-.|.. -.... ++..+..+- .....+....+...+...-.+++
T Consensus 221 cmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~---~~~~rk~w~~Fi~~~n~hl~~pe 297 (338)
T KOG0668|consen 221 CMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDIL---GRHSRKPWSRFINSENQHLVSPE 297 (338)
T ss_pred HHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHh---hccccccHHHhCCccccccCChH
Confidence 99999999999984 3332222222211 11111 111111110 01111122222222222334578
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1105 LVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1105 L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
..+|+.+.|..|..+|+||.|++.|++|..
T Consensus 298 aiDlldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 298 AIDLLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred HHHHHHHHHhhccccccchHHHhcCchHHH
Confidence 999999999999999999999999999974
No 388
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=3e-28 Score=262.50 Aligned_cols=241 Identities=33% Similarity=0.423 Sum_probs=187.9
Q ss_pred CceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCCcccc
Q 001142 819 VSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNPEHHL 896 (1142)
Q Consensus 819 sfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~~~~~ 896 (1142)
+||.||+|.+. +..+++|+...... ... .+.+ .+|++.+++++|+||+++++++....
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~-~~~~----~~e~~~~~~l~~~~i~~~~~~~~~~~------------- 60 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKI--KKK-RERI----LREISILKKLKHPNIVRLYDVFEDED------------- 60 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccc--ccH-HHHH----HHHHHHHHhCCCCcHHHHHhheeeCC-------------
Confidence 58999999985 46788887543321 111 3344 78999999999999999999987643
Q ss_pred ceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEE
Q 001142 897 LQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVK 976 (1142)
Q Consensus 897 ~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vK 976 (1142)
..++||||+++++|.+++... ..+++..+..++.+++.++.|||+.+|+|+||+|.||+++.+ +.++
T Consensus 61 -~~~l~~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~-------~~~~ 127 (244)
T smart00220 61 -KLYLVMEYCDGGDLFDLLKKR-----GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED-------GHVK 127 (244)
T ss_pred -EEEEEEeCCCCCCHHHHHHhc-----cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC-------CcEE
Confidence 459999999988999998761 238999999999999999999999999999999999999887 7899
Q ss_pred EeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCH
Q 001142 977 LCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG-LSE 1055 (1142)
Q Consensus 977 L~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~-~~~ 1055 (1142)
|+|||.+....... ......++..|++||.... ..++.++||||||+++++|++|..||.. ...
T Consensus 128 l~d~~~~~~~~~~~-----------~~~~~~~~~~~~~pE~~~~----~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~ 192 (244)
T smart00220 128 LADFGLARQLDPGG-----------LLTTFVGTPEYMAPEVLLG----KGYGKAVDVWSLGVILYELLTGKPPFPGDDQL 192 (244)
T ss_pred Eccccceeeecccc-----------ccccccCCcCCCCHHHHcc----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence 99999997654321 1123457889999999874 5677899999999999999999999976 344
Q ss_pred HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001142 1056 LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1056 ~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~ 1132 (1142)
....+.+.......... ....+..+.+++.+||..+|++||++.++++|+|+
T Consensus 193 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 193 LELFKKIGKPKPPFPPP-------------------------EWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHHHhccCCCCccc-------------------------cccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 44444433322211000 00145679999999999999999999999999875
No 389
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.6e-29 Score=287.22 Aligned_cols=268 Identities=22% Similarity=0.257 Sum_probs=197.0
Q ss_pred cceeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|..++.||-|+||.|.+++..++ .+|.|. +++.. .-.++--.-+..|-.||.....+-||++|-.|.+.+.+
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKT--LrKaD---Vl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnL- 704 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKT--LRKAD---VLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL- 704 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhh--hHHHH---HHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCce-
Confidence 57889999999999999986443 455554 33211 11111112336788999999999999999999987755
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
|+||+|++||++.+++-+ .+.|++..++.++..+..|+++.|..|+|||||||+|||||.+
T Consensus 705 -------------YFVMdYIPGGDmMSLLIr-----mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrd- 765 (1034)
T KOG0608|consen 705 -------------YFVMDYIPGGDMMSLLIR-----MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD- 765 (1034)
T ss_pred -------------EEEEeccCCccHHHHHHH-----hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccC-
Confidence 999999999999999876 3579999999999999999999999999999999999999998
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCC--------------------------------CCCCCCccCCCcccc
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRG--------------------------------IPAPDVCVGTPRWMA 1014 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~--------------------------------~~~~~~~~GT~~Y~A 1014 (1142)
|++||.|||+++-+.......++..+. .......+||+.|+|
T Consensus 766 ------GHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyia 839 (1034)
T KOG0608|consen 766 ------GHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIA 839 (1034)
T ss_pred ------CceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccC
Confidence 999999999997554322211111100 001124589999999
Q ss_pred hhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCC
Q 001142 1015 PEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFE 1093 (1142)
Q Consensus 1015 PE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~ 1093 (1142)
||++.. ..|+..+|+||.|||||||+.|++||....+.+....| .+.....++.
T Consensus 840 pevl~r----~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~--------------------- 894 (1034)
T KOG0608|consen 840 PEVLAR----TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPY--------------------- 894 (1034)
T ss_pred hHHhcc----cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhcccccc---------------------
Confidence 999986 67899999999999999999999999876665543332 2222211111
Q ss_pred CchhhhhhHHHHHHHHHHhcccCCCCCC---CHHHHHHHHHhhcCCC
Q 001142 1094 KPEAELETLSFLVDVFRRCTEENPTERP---TAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1094 ~~~~~~~~~~~L~dLI~~CL~~DP~~RP---Sa~EVL~~L~~~~ss~ 1137 (1142)
....+++..++|.++.. +++.|. -++||-.|+||+.-..
T Consensus 895 ----~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgIDf 936 (1034)
T KOG0608|consen 895 ----QGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGIDF 936 (1034)
T ss_pred ----ccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCccccccch
Confidence 11455667777765442 455664 5778999999986543
No 390
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=8.8e-30 Score=302.75 Aligned_cols=260 Identities=26% Similarity=0.329 Sum_probs=192.5
Q ss_pred cceeeeecccCceE-EEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSS-LFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~-Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~ 886 (1142)
|.-.+.+|.|+.|+ ||+|.+.++.||||.+. .++...+.+|+..|+.- .|||||++|+.-.++.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll-----------~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q--- 576 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLL-----------EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQ--- 576 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHh-----------hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCc---
Confidence 45668899999987 89999999988888642 12222347999999888 4999999998766555
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
+.||..|+|. .+|.++++... ...........+.++.|++.||+|||+-+||||||||+||||+...
T Consensus 577 -----------F~YIalELC~-~sL~dlie~~~-~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~ 643 (903)
T KOG1027|consen 577 -----------FLYIALELCA-CSLQDLIESSG-LDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS 643 (903)
T ss_pred -----------eEEEEehHhh-hhHHHHHhccc-cchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC
Confidence 4599999997 99999998631 1111111144577899999999999999999999999999998641
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
..+...++|+|||+++.+....... .......||-+|+|||++.... -+.++||||+||++|+.++|
T Consensus 644 --~~~~~ra~iSDfglsKkl~~~~sS~-------~r~s~~sGt~GW~APE~L~~~~----~~~avDiFslGCvfyYvltg 710 (903)
T KOG1027|consen 644 --ADGTLRAKISDFGLSKKLAGGKSSF-------SRLSGGSGTSGWQAPEQLREDR----KTQAVDIFSLGCVFYYVLTG 710 (903)
T ss_pred --CCcceeEEecccccccccCCCcchh-------hcccCCCCcccccCHHHHhccc----cCcccchhhcCceEEEEecC
Confidence 2334789999999999876543221 1234567999999999998733 35699999999999999995
Q ss_pred -CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1047 -QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1047 -~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
.+||... .+....|..+...... . ....++ ...+||.+|+.+||..||+|.+
T Consensus 711 G~HpFGd~--~~R~~NIl~~~~~L~~----------------L-------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~ 763 (903)
T KOG1027|consen 711 GSHPFGDS--LERQANILTGNYTLVH----------------L-------EPLPDC--EAKDLISRMLNPDPQLRPSATD 763 (903)
T ss_pred CccCCCch--HHhhhhhhcCccceee----------------e-------ccCchH--HHHHHHHHhcCCCcccCCCHHH
Confidence 9999742 2222333333221100 0 000011 6899999999999999999999
Q ss_pred HHHHHHhhcC
Q 001142 1126 LYEMFVARTS 1135 (1142)
Q Consensus 1126 VL~~L~~~~s 1135 (1142)
|+.||+|..+
T Consensus 764 VL~HPlFW~~ 773 (903)
T KOG1027|consen 764 VLNHPLFWDS 773 (903)
T ss_pred HhCCCccCCh
Confidence 9999998755
No 391
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.8e-29 Score=267.06 Aligned_cols=259 Identities=22% Similarity=0.334 Sum_probs=199.1
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 880 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~ 880 (1142)
..+.+|.+.++||+|+|..|.+++.. .+-+|+|+.+.+.. +.++.- .+++.|-.+..+. +||.+|-++.+|.
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~--nddedi---dwvqtek~vfe~asn~pflvglhscfq 321 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELV--NDDEDI---DWVQTEKHVFEQASNNPFLVGLHSCFQ 321 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhc--CCcccc---hhHHhhHHHHHhccCCCeEEehhhhhc
Confidence 34778999999999999999999875 45567776443322 222211 2346788888777 5999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
++..+ ++|.||++||+|.-++++ ...++++.++.+...|..||.|||++|||+||||.+||
T Consensus 322 tesrl--------------ffvieyv~ggdlmfhmqr-----qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnv 382 (593)
T KOG0695|consen 322 TESRL--------------FFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNV 382 (593)
T ss_pred ccceE--------------EEEEEEecCcceeeehhh-----hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccce
Confidence 77644 999999999999888876 35699999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|+|.+ +++||.|+|+++.--.. .....+++|||.|.|||++.+ ..|+..+|+|++||++
T Consensus 383 lldae-------ghikltdygmcke~l~~----------gd~tstfcgtpnyiapeilrg----eeygfsvdwwalgvlm 441 (593)
T KOG0695|consen 383 LLDAE-------GHIKLTDYGMCKEGLGP----------GDTTSTFCGTPNYIAPEILRG----EEYGFSVDWWALGVLM 441 (593)
T ss_pred EEccC-------CceeecccchhhcCCCC----------CcccccccCCCcccchhhhcc----cccCceehHHHHHHHH
Confidence 99998 89999999999753221 123346789999999999987 6899999999999999
Q ss_pred HHHHhCCCCCCC-------CCHHH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1041 LELLTLQVPYMG-------LSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~-------~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
+||+.|+.||.- .+..+ +++.|.. ....++. ..+-....+++.-
T Consensus 442 femmagrspfdivgm~n~d~ntedylfqvile-kqiripr---------------------------slsvkas~vlkgf 493 (593)
T KOG0695|consen 442 FEMMAGRSPFDIVGMDNPDMNTEDYLFQVILE-KQIRIPR---------------------------SLSVKASHVLKGF 493 (593)
T ss_pred HHHHcCCCCcceecCCCcccchhHHHHHHHhh-hcccccc---------------------------eeehhhHHHHHHh
Confidence 999999999952 11122 2232211 1111111 2233456778899
Q ss_pred cccCCCCCC------CHHHHHHHHHhhcC
Q 001142 1113 TEENPTERP------TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1113 L~~DP~~RP------Sa~EVL~~L~~~~s 1135 (1142)
|..||.+|. .++++-.|.||+.-
T Consensus 494 lnkdp~erlgc~~~~g~~dik~h~ffr~i 522 (593)
T KOG0695|consen 494 LNKDPKERLGCRPQTGFSDIKSHAFFRSI 522 (593)
T ss_pred hcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence 999999984 46888888888743
No 392
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-28 Score=251.96 Aligned_cols=224 Identities=25% Similarity=0.364 Sum_probs=177.4
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~ 883 (1142)
+++.-...||+|+||.|-+.++. +.-.|+|- +..+..... +.+.++|+.+..+. .+|.+|.+||.+....
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKr--i~~tvn~q~-----q~r~L~dldi~~r~~~CPf~V~FyGa~~reg 118 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKR--IRATVNSQE-----QKRLLMDLDIIMRTVDCPFTVHFYGALFREG 118 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEee--ehhhcChHH-----HHHHHHhhhhhccCCCCCeEEEeehhhhccc
Confidence 45677889999999998887774 55555554 444333322 23447899887665 6999999999876554
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENILI 962 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDLKp~NILl 962 (1142)
. .|+.||.|+ .||..+-++....+ ..+++..+-+|+..|++||.|||++ .|||||+||+||||
T Consensus 119 d--------------vwIcME~M~-tSldkfy~~v~~~g-~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI 182 (282)
T KOG0984|consen 119 D--------------VWICMELMD-TSLDKFYRKVLKKG-GTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI 182 (282)
T ss_pred c--------------EEEeHHHhh-hhHHHHHHHHHhcC-CcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE
Confidence 3 499999997 89988887766554 6789999999999999999999986 89999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ ++||+||||.+-.+.+.... ....|-..|||||.+........|+-|+||||||+.+.|
T Consensus 183 n~~-------GqVKiCDFGIsG~L~dSiAk-----------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiE 244 (282)
T KOG0984|consen 183 NYD-------GQVKICDFGISGYLVDSIAK-----------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIE 244 (282)
T ss_pred ccC-------CcEEEcccccceeehhhhHH-----------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhh
Confidence 998 89999999999776543221 123577889999999877666789999999999999999
Q ss_pred HHhCCCCCCC-CCHHHHHHHHHhCCCCCch
Q 001142 1043 LLTLQVPYMG-LSELEIHDLIQMGKRPRLT 1071 (1142)
Q Consensus 1043 LLtG~~Pf~~-~~~~el~~~I~~~~~p~l~ 1071 (1142)
|+++++||.. .++.+...++.....|.++
T Consensus 245 lA~lr~PY~~w~tpF~qLkqvVeep~P~Lp 274 (282)
T KOG0984|consen 245 MAILRFPYESWGTPFQQLKQVVEEPSPQLP 274 (282)
T ss_pred hhhccccccccCCHHHHHHHHhcCCCCCCc
Confidence 9999999964 4566777777666666554
No 393
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.6e-28 Score=271.81 Aligned_cols=136 Identities=21% Similarity=0.275 Sum_probs=112.4
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-----C---CCcccee
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-----H---SCIVEMY 876 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-----H---pNIVkl~ 876 (1142)
.+|.+.++||-|.|++||+|.+ ..+.||+||.+.. +.+.+..+.||.+|++++ | .+||+++
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---------qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~Ll 148 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---------QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLL 148 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---------hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeee
Confidence 5799999999999999999988 4677899886522 122233479999999984 2 3699999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCC
Q 001142 877 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDI 955 (1142)
Q Consensus 877 g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDL 955 (1142)
++|...+ ....|+|+|+|++ |.+|..+|... ....++...++.|++||+.||.|||.. ||||-||
T Consensus 149 D~FkhsG----------pNG~HVCMVfEvL-GdnLLklI~~s---~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDl 214 (590)
T KOG1290|consen 149 DHFKHSG----------PNGQHVCMVFEVL-GDNLLKLIKYS---NYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDL 214 (590)
T ss_pred ccceecC----------CCCcEEEEEehhh-hhHHHHHHHHh---CCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCC
Confidence 9998643 3567999999999 78999999874 345699999999999999999999965 9999999
Q ss_pred CCCCeeeccc
Q 001142 956 KSENILIDLE 965 (1142)
Q Consensus 956 Kp~NILld~~ 965 (1142)
||+|||+...
T Consensus 215 KPENvLl~~~ 224 (590)
T KOG1290|consen 215 KPENVLLCST 224 (590)
T ss_pred Ccceeeeecc
Confidence 9999998543
No 394
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.96 E-value=9e-28 Score=288.07 Aligned_cols=290 Identities=18% Similarity=0.186 Sum_probs=185.5
Q ss_pred CCCCcceeeeecccCceEEEEEEE------------------CCccEEEEEEecccCCCChHHHHHh----------HHh
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF------------------GSADAAAKVRTLKVCGSSADEIRNF----------EYS 856 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~------------------~~~~vAvKi~~l~~~~~~~~~~~~~----------~~~ 856 (1142)
+.++|++.++||+|+||+||+|.+ .+..||||....... ...++| ...
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~----~~~~~fl~e~~~~~~~~e~ 218 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ----GVRQDFLKTGTLAKGSAET 218 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch----hhHHHHHhhhhhhhcccch
Confidence 466899999999999999999964 224577776543211 111111 112
Q ss_pred HHHHHHHHhhCCCCCc-----cceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc----------
Q 001142 857 CLGEVRMLGALRHSCI-----VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---------- 921 (1142)
Q Consensus 857 ~~~Ei~iL~~L~HpNI-----Vkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~---------- 921 (1142)
...|+.++.+++|.++ +++++++..... ++ .......++||||+++++|.++++.....
T Consensus 219 ~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~----~g--~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~ 292 (507)
T PLN03224 219 GMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTA----DG--AFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMM 292 (507)
T ss_pred hHHHHHHHHHhhcccchhhhhhhhhhhcccccc----cc--cccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHh
Confidence 2467888888876554 677777754211 01 01122469999999999999998742100
Q ss_pred ---------CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccc
Q 001142 922 ---------GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHT 992 (1142)
Q Consensus 922 ---------~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~ 992 (1142)
....+++..++.++.|++.||.|||+++|+||||||+|||++.+ +.+||+|||++.........
T Consensus 293 ~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~-------~~~kL~DFGla~~~~~~~~~ 365 (507)
T PLN03224 293 AGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVD-------GQVKIIDFGAAVDMCTGINF 365 (507)
T ss_pred cCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCC-------CcEEEEeCcCccccccCCcc
Confidence 11235678899999999999999999999999999999999877 78999999998654321110
Q ss_pred cccccCCCCCCCCccCCCcccchhhhccccCCC----------------CC--CchhhHHHHHHHHHHHHhCCC-CCCCC
Q 001142 993 CCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN----------------LY--GLEVDIWSYGCLLLELLTLQV-PYMGL 1053 (1142)
Q Consensus 993 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~----------------~~--s~ksDVwSLGviL~ELLtG~~-Pf~~~ 1053 (1142)
......+|+.|+|||.+....... .| ..+.||||+||++++|+++.. ||.+.
T Consensus 366 ---------~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~ 436 (507)
T PLN03224 366 ---------NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANI 436 (507)
T ss_pred ---------CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccch
Confidence 111223588999999975421000 01 235799999999999999875 66532
Q ss_pred CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC---CCCCCHHHHHHHH
Q 001142 1054 SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP---TERPTAGDLYEMF 1130 (1142)
Q Consensus 1054 ~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP---~~RPSa~EVL~~L 1130 (1142)
.... ..+...... . ..+... ......+. .....++..++|+.+||..+| .+|+|++|+++|+
T Consensus 437 ~~f~--~~~~~~~~~-~-~~~r~~--------~~~~~~~~---~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp 501 (507)
T PLN03224 437 RLFN--TELRQYDND-L-NRWRMY--------KGQKYDFS---LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHR 501 (507)
T ss_pred hhhh--hHHhhccch-H-HHHHhh--------cccCCCcc---cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCC
Confidence 1111 111100000 0 000000 00000011 111456779999999999766 6899999999999
Q ss_pred HhhcC
Q 001142 1131 VARTS 1135 (1142)
Q Consensus 1131 ~~~~s 1135 (1142)
|+...
T Consensus 502 ~f~~~ 506 (507)
T PLN03224 502 FFLPE 506 (507)
T ss_pred CcCCC
Confidence 99753
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2e-29 Score=265.85 Aligned_cols=284 Identities=19% Similarity=0.282 Sum_probs=201.8
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+.+--+.||.|+||+||.+++. ++.++.| ++.........-+ ++-+|+.+|..++|.|++..++...-...
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalk--K~pnvfq~L~s~k----rvFre~kmLcfFkHdNVLSaLDILQPph~ 126 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALK--KMPNVFQNLASCK----RVFREIKMLSSFRHDNVLSLLDILQPANP 126 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHh--hcchHHHHHHHHH----HHHHHHHHHHhhccccHHHHHHhcCCCCc
Confidence 34566789999999999999884 4444444 3332222222223 33699999999999999999887654321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
......|+|+|++. .+|...|-. ...++.+.++-+++||++||.|||+.+|.||||||.|.|++.
T Consensus 127 ---------dfFqEiYV~TELmQ-SDLHKIIVS-----PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNS 191 (449)
T KOG0664|consen 127 ---------SFFQELYVLTELMQ-SDLHKIIVS-----PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNS 191 (449)
T ss_pred ---------hHHHHHHHHHHHHH-hhhhheecc-----CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEecc
Confidence 11234688999996 788888764 357999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ ..+||||||+|+........ .....+.|.+|+|||++.+ ...|+.++||||.|||+.||+
T Consensus 192 N-------CvLKICDFGLARvee~d~~~---------hMTqEVVTQYYRAPEiLMG---aRhYs~AvDiWSVGCIFaELL 252 (449)
T KOG0664|consen 192 N-------CILKICDFGLARTWDQRDRL---------NMTHEVVTQYYRAPELLMG---ARRYTGAVDIWSVGCIFAELL 252 (449)
T ss_pred C-------ceEEecccccccccchhhhh---------hhHHHHHHHHhccHHHhhc---chhhcCccceehhhHHHHHHH
Confidence 8 89999999999864332211 1112356889999999998 357899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhcccccccccccCCCCCCchh--------hhhhHHHHHHHHHHhccc
Q 001142 1045 TLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA--------ELETLSFLVDVFRRCTEE 1115 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~L~dLI~~CL~~ 1115 (1142)
.++..|+..++.+..+.|.. -..|.... +..........+... ....+.. ......+...++..++..
T Consensus 253 gRrILFQAq~PiqQL~lItdLLGTPs~Ea-Mr~ACEGAk~H~LR~--~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~ 329 (449)
T KOG0664|consen 253 QRKILFQAAGPIEQLQMIIDLLGTPSQEA-MKYACEGAKNHVLRA--GLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHF 329 (449)
T ss_pred hhhhhhhccChHHHHHHHHHHhCCCcHHH-HHHHhhhhHHHhhcc--CCCCCCccceeeecCCcccchHHHHHHHHHhCC
Confidence 99999998888877777633 23333322 211111111111110 0001100 112234467788899999
Q ss_pred CCCCCCCHHHHHHHHHhh
Q 001142 1116 NPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1116 DP~~RPSa~EVL~~L~~~ 1133 (1142)
||++|.+.++.+.|++..
T Consensus 330 d~dkris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 330 DPDKRISVEEALQHRYLE 347 (449)
T ss_pred CCcccccHhhhccccccc
Confidence 999999999999998764
No 396
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=3.4e-29 Score=290.64 Aligned_cols=262 Identities=27% Similarity=0.394 Sum_probs=211.6
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
-++|++.+++|.|+||.||+|++ .+..+|+|+++++.. +..... .+|+-+++..+|||||.++|.+...+
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~----dd~~~i----qqei~~~~dc~h~nivay~gsylr~d 85 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG----DDFSGI----QQEIGMLRDCRHPNIVAYFGSYLRRD 85 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCC----cccccc----ccceeeeecCCCcChHHHHhhhhhhc
Confidence 45799999999999999999997 577899999887743 333333 68999999999999999999887655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.+ |+.||||.||+|++.-+- ..++++.++..+.+..++||+|||++|-+|||||-.||+++
T Consensus 86 kl--------------wicMEycgggslQdiy~~-----TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt 146 (829)
T KOG0576|consen 86 KL--------------WICMEYCGGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT 146 (829)
T ss_pred Cc--------------EEEEEecCCCcccceeee-----cccchhHHHHHHHhhhhccchhhhcCCcccccccccceeec
Confidence 44 999999999999987654 46899999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
+. +.+|+.|||.+..+.... .....+.||++|||||+-.- .+...|.+++|||+.|+...|+
T Consensus 147 d~-------gDvklaDfgvsaqitati----------~KrksfiGtpywmapEvaav-erkggynqlcdiwa~gitAiel 208 (829)
T KOG0576|consen 147 DE-------GDVKLADFGVSAQITATI----------AKRKSFIGTPYWMAPEVAAV-ERKGGYNQLCDIWALGITAIEL 208 (829)
T ss_pred cc-------CceeecccCchhhhhhhh----------hhhhcccCCccccchhHHHH-Hhcccccccccccccccchhhh
Confidence 88 889999999987654422 23346789999999998643 3346799999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
..-++|.....+.+...........+... + ......+.+.+|++.++..+|++||++
T Consensus 209 ~eLqpplfdlhpmr~l~LmTkS~~qpp~l--------------k---------Dk~kws~~fh~fvK~altknpKkRpta 265 (829)
T KOG0576|consen 209 GELQPPLFDLHPMRALFLMTKSGFQPPTL--------------K---------DKTKWSEFFHNFVKGALTKNPKKRPTA 265 (829)
T ss_pred hhcCCcccccchHHHHHHhhccCCCCCcc--------------c---------CCccchHHHHHHHHHHhcCCCccCCCh
Confidence 99999977666666555543222111110 0 001456679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
+.++.|++....
T Consensus 266 eklL~h~fvs~~ 277 (829)
T KOG0576|consen 266 EKLLQHPFVSQT 277 (829)
T ss_pred hhheeceeeccc
Confidence 999999887654
No 397
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=3.2e-28 Score=263.62 Aligned_cols=282 Identities=20% Similarity=0.217 Sum_probs=199.5
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|.-.+.+|.|+- .|-.|.+ .+..|++|. +..........+ +..+|...+..+.|+||++++.+|.-...
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk--~~~pf~n~~~ak----ra~rel~l~~~v~~~nii~l~n~ftP~~~ 89 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKK--LSRPFQNQTHAK----RAYRELKLMKCVNHKNIISLLNVFTPQKT 89 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhh--hcCccccCccch----hhhhhhhhhhhhcccceeeeeeccCcccc
Confidence 45777788899988 6666655 355555554 322222222222 23699999999999999999999876443
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ......|+||||+. .+|...+.- .++-..+..|+.|++.|++|||+.||+||||||+||++..
T Consensus 90 l--------~~~~e~y~v~e~m~-~nl~~vi~~-------elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~ 153 (369)
T KOG0665|consen 90 L--------EEFQEVYLVMELMD-ANLCQVILM-------ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNS 153 (369)
T ss_pred H--------HHHHhHHHHHHhhh-hHHHHHHHH-------hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecc
Confidence 2 23345799999997 899998873 4777899999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +++||.|||+|+..... ......+.|.+|.|||++.+ ..|...+||||.||++.||+
T Consensus 154 ~-------~~lKi~dfg~ar~e~~~-----------~~mtpyVvtRyyrapevil~----~~~ke~vdiwSvGci~gEli 211 (369)
T KOG0665|consen 154 D-------CTLKILDFGLARTEDTD-----------FMMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGELI 211 (369)
T ss_pred h-------hheeeccchhhcccCcc-----------cccCchhheeeccCchheec----cCCcccchhhhhhhHHHHHh
Confidence 8 89999999999754322 01224568999999999987 34889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHH-HhCCCCCchh--HHhhhccccc--------ccccccCCCCCCc---hhhhhhHHHHHHHHH
Q 001142 1045 TLQVPYMGLSELEIHDLI-QMGKRPRLTD--ELEALGSCHE--------HEVAQSGSGFEKP---EAELETLSFLVDVFR 1110 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I-~~~~~p~l~~--~l~~~~~~~~--------~~~~~~~~~~~~~---~~~~~~~~~L~dLI~ 1110 (1142)
+|+..|.+.+..+.+.++ ..-..|.... .+......+- ..+...-+....+ +.+......+++++.
T Consensus 212 ~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~ 291 (369)
T KOG0665|consen 212 LGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLS 291 (369)
T ss_pred hceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHH
Confidence 999999887665544443 3333332221 1111110000 0000000000000 001133566899999
Q ss_pred HhcccCCCCCCCHHHHHHHHHhh
Q 001142 1111 RCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1111 ~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
+||..||++|.+++++|.||+++
T Consensus 292 ~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 292 KMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HhhccChhhcccHHHHhcCCeee
Confidence 99999999999999999999986
No 398
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=3.4e-28 Score=274.98 Aligned_cols=277 Identities=22% Similarity=0.296 Sum_probs=208.8
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC------CCCccceeee
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR------HSCIVEMYGH 878 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~------HpNIVkl~g~ 878 (1142)
.+|.+....|+|-|++|-+|.+ .+..|||||.+-.. ...... ++|++||++|. --|+++++..
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE----~M~KtG-----l~EleiLkKL~~AD~Edk~Hclrl~r~ 502 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE----VMHKTG-----LKELEILKKLNDADPEDKFHCLRLFRH 502 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch----HHhhhh-----hHHHHHHHHhhccCchhhhHHHHHHHH
Confidence 3589999999999999999987 46689999865321 111122 58999999995 2478999988
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
|...+ |+|||+|-+. .+|.++++++.. ...|....+..++.|+..||.+|-..||+|.||||+
T Consensus 503 F~hkn--------------HLClVFE~Ls-lNLRevLKKyG~--nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPD 565 (752)
T KOG0670|consen 503 FKHKN--------------HLCLVFEPLS-LNLREVLKKYGR--NVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPD 565 (752)
T ss_pred hhhcc--------------eeEEEehhhh-chHHHHHHHhCc--ccceeehHHHHHHHHHHHHHHHHHhcCeeecccCcc
Confidence 87554 5699999996 899999998643 346889999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||++... ..+||||||.|.......-+ ....+..|.|||++.+ -+|+...|+||.||
T Consensus 566 NiLVNE~k------~iLKLCDfGSA~~~~eneit------------PYLVSRFYRaPEIiLG----~~yd~~iD~WSvgc 623 (752)
T KOG0670|consen 566 NILVNESK------NILKLCDFGSASFASENEIT------------PYLVSRFYRAPEIILG----LPYDYPIDTWSVGC 623 (752)
T ss_pred ceEeccCc------ceeeeccCcccccccccccc------------HHHHHHhccCcceeec----CcccCCccceeece
Confidence 99998764 78999999999765543222 2235678999999998 67999999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHH--HhCCCCCchhHHhhhccccccc--------------c-----------cccCC-
Q 001142 1039 LLLELLTLQVPYMGLSELEIHDLI--QMGKRPRLTDELEALGSCHEHE--------------V-----------AQSGS- 1090 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~~el~~~I--~~~~~p~l~~~l~~~~~~~~~~--------------~-----------~~~~~- 1090 (1142)
.||||.||+..|.+.+..+++... ..|..|.-. -.-+.+.+.. + .++..
T Consensus 624 tLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~Km---lRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkd 700 (752)
T KOG0670|consen 624 TLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKM---LRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKD 700 (752)
T ss_pred eeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHH---hhhcchhhhhcccccceEEEeccccccceeEEEecccCcchh
Confidence 999999999999998877766554 333333211 1001110000 0 00000
Q ss_pred -------CCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1091 -------GFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1091 -------~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
.-..++.+......+.+|+..||..||++|.|..++|+|||+..
T Consensus 701 l~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 701 LGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 00023333466788999999999999999999999999999864
No 399
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.95 E-value=1.2e-29 Score=290.03 Aligned_cols=277 Identities=25% Similarity=0.287 Sum_probs=176.8
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCC--CCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTV--DFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L--~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1142)
.++.|.++.|+|..+. +.++.|+.|+.+++..|+| +|++++.| .|..|+.||||+|+|+++|..+..-+++-+
T Consensus 56 kLEHLs~~HN~L~~vh-GELs~Lp~LRsv~~R~N~LKnsGiP~diF----~l~dLt~lDLShNqL~EvP~~LE~AKn~iV 130 (1255)
T KOG0444|consen 56 KLEHLSMAHNQLISVH-GELSDLPRLRSVIVRDNNLKNSGIPTDIF----RLKDLTILDLSHNQLREVPTNLEYAKNSIV 130 (1255)
T ss_pred hhhhhhhhhhhhHhhh-hhhccchhhHHHhhhccccccCCCCchhc----ccccceeeecchhhhhhcchhhhhhcCcEE
Confidence 5677778888887775 5677788888888888877 34444433 347778888888888888877777777778
Q ss_pred EEccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCC----------------------
Q 001142 96 LKFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPS---------------------- 152 (1142)
Q Consensus 96 L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~---------------------- 152 (1142)
|+||+|+|.+||.. |-+|+.|-.|||++|++..+|+....|..|++|.|++|+++..
T Consensus 131 LNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT 210 (1255)
T KOG0444|consen 131 LNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT 210 (1255)
T ss_pred EEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch
Confidence 88888888878776 4467777788888888777777777777777777777764321
Q ss_pred cccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCc-----------------------cchhhcCC
Q 001142 153 VLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKY-----------------------LPTEICYL 209 (1142)
Q Consensus 153 ~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~-----------------------lP~~l~~L 209 (1142)
...+|.++..|.+|..++|+.|.+..+|+.+.++.+|+.|+||+|+|++ +|+.++.|
T Consensus 211 l~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL 290 (1255)
T KOG0444|consen 211 LDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKL 290 (1255)
T ss_pred hhcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhh
Confidence 1224555556666666677777766666666666666666666555554 44445555
Q ss_pred CCCCEEEccCCCCC--ccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhccCCCCC
Q 001142 210 KALISLKVANNKLV--ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNG 287 (1142)
Q Consensus 210 ~~L~~L~Ls~N~Ls--~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~ 287 (1142)
+.|+.|.+.+|+|+ .||++++.|.+|+.+..++|.|.-+ |+.++.+..|+.|.|+.|+|-. +|..+.+......
T Consensus 291 ~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElV-PEglcRC~kL~kL~L~~NrLiT---LPeaIHlL~~l~v 366 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELV-PEGLCRCVKLQKLKLDHNRLIT---LPEAIHLLPDLKV 366 (1255)
T ss_pred HHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccccC-chhhhhhHHHHHhcccccceee---chhhhhhcCCcce
Confidence 55555555555444 4555555555555555555555433 3456666666666666666655 6666665555555
Q ss_pred CCCC-CCCccccccccc
Q 001142 288 KDSS-NDDFISSSAEMD 303 (1142)
Q Consensus 288 l~~~-~~~~~~~~~~~~ 303 (1142)
++.- ++++..+..|.+
T Consensus 367 LDlreNpnLVMPPKP~d 383 (1255)
T KOG0444|consen 367 LDLRENPNLVMPPKPND 383 (1255)
T ss_pred eeccCCcCccCCCCcch
Confidence 5442 334444444433
No 400
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.94 E-value=3.3e-26 Score=252.01 Aligned_cols=258 Identities=22% Similarity=0.322 Sum_probs=203.3
Q ss_pred CcceeeeecccCceEEEEEEECCc-------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGSA-------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~~-------~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
++++..++-+|.||.||+|.|... .+.||. ++. ....-+.. .++.|.-.+..+.|||+..+.+...
T Consensus 285 Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKT--vk~-~AS~iQv~----~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 285 RVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKT--VKQ-HASQIQVN----LLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred heechhhhhcCchhheeeeeecccCCcchHHHHHHHH--HHh-cccHHHHH----HHHHHHHHHhcCcCCCccceeEEEe
Confidence 367788899999999999987432 233332 222 11222233 3478888889999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE---TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~---~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
++.. ..+.++.+..-|+|..+++.++. .....++..+...++.|++.|++|||++||||.||-+
T Consensus 358 e~~~-------------~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAa 424 (563)
T KOG1024|consen 358 EDYA-------------TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAA 424 (563)
T ss_pred eccC-------------cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhh
Confidence 6432 34889999988999999985432 2334577788899999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
.|.+|++. -.|||+|=.+++.+......+- .. .......||+||.+.. ..|+.++||||||
T Consensus 425 RNCvIdd~-------LqVkltDsaLSRDLFP~DYhcL-GD-------nEnRPvkWMslEal~n----~~yssasDvWsfG 485 (563)
T KOG1024|consen 425 RNCVIDDQ-------LQVKLTDSALSRDLFPGDYHCL-GD-------NENRPVKWMSLEALQN----SHYSSASDVWSFG 485 (563)
T ss_pred hcceehhh-------eeEEeccchhccccCccccccc-CC-------CCCCcccccCHHHHhh----hhhcchhhhHHHH
Confidence 99999987 7899999999987655443321 11 1124567999999987 6799999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1038 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1038 viL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
|++|||+| |+.|+...++.++...+..|.+..-+ .++++++..++.-||..+
T Consensus 486 VllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP---------------------------~NCPDeLf~vMacCWall 538 (563)
T KOG1024|consen 486 VLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQP---------------------------FNCPDELFTVMACCWALL 538 (563)
T ss_pred HHHHHHHhcCCCCccccCHHHHHHHHhccceecCC---------------------------CCCcHHHHHHHHHHHhcC
Confidence 99999999 99999999999999888877653211 178899999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 001142 1117 PTERPTAGDLYEMFV 1131 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~ 1131 (1142)
|++||+++|++.-+-
T Consensus 539 peeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 539 PEERPSFSQLVICLS 553 (563)
T ss_pred cccCCCHHHHHHHHH
Confidence 999999999987653
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=4.9e-27 Score=268.83 Aligned_cols=208 Identities=25% Similarity=0.358 Sum_probs=165.8
Q ss_pred CCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCCh---HHHHHhHHhHHHHHHHHhhCC---CCCcccee
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSA---DEIRNFEYSCLGEVRMLGALR---HSCIVEMY 876 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~---~~~~~~~~~~~~Ei~iL~~L~---HpNIVkl~ 876 (1142)
+..+.+|+..+.+|+|+||.|++|.++...+.|-+|.+.+...-. -..+.+ -.+-.|++||..++ |+||++++
T Consensus 557 ~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkL-GtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 557 YKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKL-GTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred ecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhccccc-CccchhHHHHHHhhhcCccchhhhh
Confidence 556788999999999999999999996554444443333221100 011111 11246999999997 99999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEecc-CCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 001142 877 GHKISSKWLPSADGNPEHHLLQSAIFMEYV-KGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 955 (1142)
Q Consensus 877 g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~-~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDL 955 (1142)
++|++++++ ||+||-. +|.+|.++|.. ...+++.++..|++||+.|++|||++|||||||
T Consensus 636 dfFEddd~y--------------yl~te~hg~gIDLFd~IE~-----kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdi 696 (772)
T KOG1152|consen 636 DFFEDDDYY--------------YLETEVHGEGIDLFDFIEF-----KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDI 696 (772)
T ss_pred heeecCCee--------------EEEecCCCCCcchhhhhhc-----cCccchHHHHHHHHHHHhccccccccCceeccc
Confidence 999998765 9999975 45699999976 467999999999999999999999999999999
Q ss_pred CCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001142 956 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1035 (1142)
Q Consensus 956 Kp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwS 1035 (1142)
|-+||.++.+ |-+||+|||.|...... .-..++||..|.|||++.+ ....+..-||||
T Consensus 697 kdenvivd~~-------g~~klidfgsaa~~ksg------------pfd~f~gtv~~aapevl~g---~~y~gk~qdiwa 754 (772)
T KOG1152|consen 697 KDENVIVDSN-------GFVKLIDFGSAAYTKSG------------PFDVFVGTVDYAAPEVLGG---EKYLGKPQDIWA 754 (772)
T ss_pred ccccEEEecC-------CeEEEeeccchhhhcCC------------CcceeeeeccccchhhhCC---CccCCCcchhhh
Confidence 9999999988 89999999998654321 1236789999999999987 234578899999
Q ss_pred HHHHHHHHHhCCCCCCC
Q 001142 1036 YGCLLLELLTLQVPYMG 1052 (1142)
Q Consensus 1036 LGviL~ELLtG~~Pf~~ 1052 (1142)
+|++||.++....||..
T Consensus 755 lgillytivykenpyyn 771 (772)
T KOG1152|consen 755 LGILLYTIVYKENPYYN 771 (772)
T ss_pred hhheeeEEEeccCCCcC
Confidence 99999999988888863
No 402
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=2.7e-26 Score=299.86 Aligned_cols=255 Identities=24% Similarity=0.307 Sum_probs=206.0
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~L~~ 95 (1142)
..|..|.+..|++++..+. ..+++|++|||++|.+++.+|..++.+ ++|++|+|++|.++ .+|..|.++++|++
T Consensus 118 ~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l---~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 192 (968)
T PLN00113 118 SSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSF---SSLKVLDLGGNVLVGKIPNSLTNLTSLEF 192 (968)
T ss_pred CCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcC---CCCCEEECccCcccccCChhhhhCcCCCe
Confidence 4678888888888765443 457888888888888888888776554 88888888888876 67888888888888
Q ss_pred EEccCCCCC-cCchhhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC
Q 001142 96 LKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1142)
Q Consensus 96 L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1142)
|+|++|.++ .+|..++++++|+.|+|++|.+. .+|..+..+++|++|++++|. ..+.+|..+.++++|+.|++++
T Consensus 193 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~---l~~~~p~~l~~l~~L~~L~L~~ 269 (968)
T PLN00113 193 LTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNN---LTGPIPSSLGNLKNLQYLFLYQ 269 (968)
T ss_pred eeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCce---eccccChhHhCCCCCCEEECcC
Confidence 888888887 67888888888888888888854 577778888888888888843 4456777888888888888888
Q ss_pred CCCC-ccCcccCCCCCCCEEEccCCCCC-ccchhhcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeCcCCcCCCCCc
Q 001142 174 FSIR-YLPPEIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 174 N~L~-~IP~~l~~L~~L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
|.++ .+|..+.++++|+.|+|++|+++ .+|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.+++.+|
T Consensus 270 n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 349 (968)
T PLN00113 270 NKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIP 349 (968)
T ss_pred CeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCC
Confidence 8887 67888888888888888888887 67888888888888888888887 678888888888888888888888888
Q ss_pred ccccCCCCCCEEEccCCCCCCCCCCCchhhc
Q 001142 251 LDLCLMHNLQNLNLQYNKLLSYCQVPSWICC 281 (1142)
Q Consensus 251 ~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~ 281 (1142)
..+..+++|+.|+|++|++++ .+|.+++.
T Consensus 350 ~~l~~~~~L~~L~Ls~n~l~~--~~p~~~~~ 378 (968)
T PLN00113 350 KNLGKHNNLTVLDLSTNNLTG--EIPEGLCS 378 (968)
T ss_pred hHHhCCCCCcEEECCCCeeEe--eCChhHhC
Confidence 788888888888888888876 46665553
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=2.6e-26 Score=257.37 Aligned_cols=288 Identities=23% Similarity=0.320 Sum_probs=195.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeE
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK 879 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~ 879 (1142)
...|..+++||+|+|++||+|... ...+|+|- +..+.... ++..|+++|..+. +.||+++.+++
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~--i~~ts~p~--------ri~~El~~L~~~gG~~ni~~~~~~~ 104 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKA--IYRTSSPS--------RILNELEMLYRLGGSDNIIKLNGCF 104 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeee--cccccCch--------HHHHHHHHHHHhccchhhhcchhhh
Confidence 346899999999999999999863 34455554 44333222 2478999999995 99999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
...+ +..+||||++.....++... ++..++..+++.++.||.|+|.+|||||||||+|
T Consensus 105 rnnd--------------~v~ivlp~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsN 162 (418)
T KOG1167|consen 105 RNND--------------QVAIVLPYFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSN 162 (418)
T ss_pred ccCC--------------eeEEEecccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhccCccccCCCccc
Confidence 7655 45999999998888888765 7789999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccc-cccccc---------------------------------cCCCCCCCC
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFL-HTCCIA---------------------------------HRGIPAPDV 1005 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~-~~~~~~---------------------------------~~~~~~~~~ 1005 (1142)
+|.+... +.-.|+|||+|....... ...... .........
T Consensus 163 FL~n~~t------~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~an 236 (418)
T KOG1167|consen 163 FLYNRRT------QRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERAN 236 (418)
T ss_pred ccccccc------CCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecc
Confidence 9998764 567899999997211100 000000 000111234
Q ss_pred ccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HH-HHHH--------H-----HhCC----
Q 001142 1006 CVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSE-LE-IHDL--------I-----QMGK---- 1066 (1142)
Q Consensus 1006 ~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~-~e-l~~~--------I-----~~~~---- 1066 (1142)
..||++|+|||++... ..-++++||||.|||++-++++.+||..... .. +.+. + ..+.
T Consensus 237 rAGT~GfRaPEvL~k~---~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~ 313 (418)
T KOG1167|consen 237 RAGTPGFRAPEVLFRC---PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLW 313 (418)
T ss_pred cCCCCCCCchHHHhhc---cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeee
Confidence 5799999999999863 3456899999999999999999999964211 11 1111 0 1111
Q ss_pred ----CCCchhHHhhhcccccccccccCCC-CCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1067 ----RPRLTDELEALGSCHEHEVAQSGSG-FEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1067 ----~p~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
.+.++..........-..+.+.... ..........+..+.+++.+|+..||.+|.||+++|+|+||..
T Consensus 314 ~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 314 QKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred ccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 0000000000000000000110000 0111122244557999999999999999999999999999863
No 404
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.93 E-value=1.9e-27 Score=271.95 Aligned_cols=273 Identities=22% Similarity=0.279 Sum_probs=167.6
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNL 96 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L 96 (1142)
.+++|.+..|.|+.+....++-++.|++||||.|.|+.+....|..- .+|++|+|++|.|+.+- ..|.+|.+|..|
T Consensus 126 hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~---~ni~~L~La~N~It~l~~~~F~~lnsL~tl 202 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAK---VNIKKLNLASNRITTLETGHFDSLNSLLTL 202 (873)
T ss_pred ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCC---CCceEEeeccccccccccccccccchheee
Confidence 56666666666666666666667777777777777766655544432 46777777777777663 356666677777
Q ss_pred EccCCCCCcCchh-hcCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCC
Q 001142 97 KFFGNEINLFPSE-VGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~l~~~-~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1142)
.|+.|.|+.+|.. |.+|++|+.|+|..|++... +..|..|.+|+.|.|..|.+..+. -+.|..|..+++|+|..|
T Consensus 203 kLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~---DG~Fy~l~kme~l~L~~N 279 (873)
T KOG4194|consen 203 KLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLD---DGAFYGLEKMEHLNLETN 279 (873)
T ss_pred ecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCccccc---Ccceeeecccceeecccc
Confidence 7777777777655 44477777777777776665 456666777776666664443322 224555666666666666
Q ss_pred CCCccCc-ccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeCcCCcCCCCCcc
Q 001142 175 SIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSL 251 (1142)
Q Consensus 175 ~L~~IP~-~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~~p~ 251 (1142)
+++.+-. ++.+|+.|+.|+||+|.|..| +++....++|++|+|++|+|+.+|+ ++..|..|+.|+|++|+|+.+-..
T Consensus 280 ~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~ 359 (873)
T KOG4194|consen 280 RLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEG 359 (873)
T ss_pred hhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhh
Confidence 6665533 456666666666666666655 4555556666666666666666643 344466666666666666666666
Q ss_pred cccCCCCCCEEEccCCCCCC--------CCCCCchhhccCCCCCCCCCCCCcc
Q 001142 252 DLCLMHNLQNLNLQYNKLLS--------YCQVPSWICCNLEGNGKDSSNDDFI 296 (1142)
Q Consensus 252 ~l~~L~~L~~L~Ls~N~L~~--------~~~iP~~~~~~l~~n~l~~~~~~~~ 296 (1142)
.|..+++|+.|||++|.|+. +..+|..-.+.+.+|.+.......+
T Consensus 360 af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAf 412 (873)
T KOG4194|consen 360 AFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAF 412 (873)
T ss_pred HHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhh
Confidence 66666666666666666544 1124444445555555544444333
No 405
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=1.7e-24 Score=226.72 Aligned_cols=212 Identities=34% Similarity=0.506 Sum_probs=173.1
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 815 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 815 LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
||+|++|.||++... +..+++|++..... .. ..+. +.+|+..++.+.|++|+++++++....
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~--~~-~~~~----~~~e~~~~~~l~~~~i~~~~~~~~~~~--------- 64 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS--SS-LLEE----LLREIEILKKLNHPNIVKLYGVFEDEN--------- 64 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccc--hh-HHHH----HHHHHHHHHhcCCCCeeeEeeeeecCC---------
Confidence 689999999999986 77888888653321 10 1223 379999999999999999999987643
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc-ccccCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL-ERKKADG 971 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~-~~~~~~~ 971 (1142)
..+++|||+++++|.+++... ...+++..+..++.+++.++.|||++|++|+||+|.||+++. +
T Consensus 65 -----~~~~~~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~------ 129 (215)
T cd00180 65 -----HLYLVMEYCEGGSLKDLLKEN----EGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDN------ 129 (215)
T ss_pred -----eEEEEEecCCCCcHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCC------
Confidence 459999999999999998762 136899999999999999999999999999999999999987 5
Q ss_pred CCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 001142 972 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYM 1051 (1142)
Q Consensus 972 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~ 1051 (1142)
..++|+|||.+........ ......+...|++||..... ..++.+.|+|++|+++++|
T Consensus 130 -~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~~~---~~~~~~~D~~~lg~~~~~l-------- 187 (215)
T cd00180 130 -GKVKLADFGLSKLLTSDKS----------LLKTIVGTPAYMAPEVLLGK---GYYSEKSDIWSLGVILYEL-------- 187 (215)
T ss_pred -CcEEEecCCceEEccCCcc----------hhhcccCCCCccChhHhccc---CCCCchhhhHHHHHHHHHH--------
Confidence 6899999999976543210 01223578889999998652 2667899999999999999
Q ss_pred CCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 001142 1052 GLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF 1130 (1142)
Q Consensus 1052 ~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L 1130 (1142)
..+.+++..|++.||.+||++.++++++
T Consensus 188 ---------------------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---------------------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---------------------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 0267889999999999999999999864
No 406
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.2e-26 Score=240.86 Aligned_cols=264 Identities=18% Similarity=0.252 Sum_probs=190.4
Q ss_pred CCCCCC-CcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeee-
Q 001142 802 DPGSFP-SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGH- 878 (1142)
Q Consensus 802 ~~~~~~-~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~- 878 (1142)
.-.++. .|.+.+.||+|.||.+-+|+++++...+.++.+.. .....++| .+|...--.|. |.||+.-|+.
T Consensus 18 ~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~---p~tt~~dF----~rEfhY~~~Ls~H~hIi~tY~va 90 (378)
T KOG1345|consen 18 KKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR---PQTTQADF----VREFHYSFFLSPHQHIIDTYEVA 90 (378)
T ss_pred cccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc---chhhHHHH----HHHhccceeeccchhhhHHHHHH
Confidence 333443 49999999999999999999977666665554443 34455666 78887766774 9999988875
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
|+..+. +.++|||+|.|+|.+-+.. ..+.+...++++.|+++|+.|||++++||||||.+
T Consensus 91 Fqt~d~--------------YvF~qE~aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~e 150 (378)
T KOG1345|consen 91 FQTSDA--------------YVFVQEFAPRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAE 150 (378)
T ss_pred hhcCce--------------EEEeeccCccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhhccchhhcccccc
Confidence 444443 3899999999999988764 34888999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC-CCCCchhhHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP-NLYGLEVDIWSYG 1037 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~-~~~s~ksDVwSLG 1037 (1142)
||||-..+ ...|||||||..+....... ..--+..|.|||.......+ -...+.+|||.||
T Consensus 151 NiLif~~d-----f~rvKlcDFG~t~k~g~tV~-------------~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfG 212 (378)
T KOG1345|consen 151 NILIFDAD-----FYRVKLCDFGLTRKVGTTVK-------------YLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFG 212 (378)
T ss_pred eEEEecCC-----ccEEEeeecccccccCceeh-------------hhhhhcccCCcHHHhhccccceEecccccchhee
Confidence 99995431 26899999999875443221 11235569999987653211 2346889999999
Q ss_pred HHHHHHHhCCCCCCCCCHHH----HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1038 CLLLELLTLQVPYMGLSELE----IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~~~~e----l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
++++.++||++||+.....+ -+.+...+..+.++..+. ..++.+..+.++-|
T Consensus 213 Ii~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~------------------------~fs~~a~r~Fkk~l 268 (378)
T KOG1345|consen 213 IIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFN------------------------PFSEKALRLFKKSL 268 (378)
T ss_pred eeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhc------------------------ccCHHHHHHHHHhc
Confidence 99999999999998432221 112223333333333221 33455777888999
Q ss_pred ccCCCCC---CCHHHHHHHHHhhc
Q 001142 1114 EENPTER---PTAGDLYEMFVART 1134 (1142)
Q Consensus 1114 ~~DP~~R---PSa~EVL~~L~~~~ 1134 (1142)
..+|++| .++....+.+|...
T Consensus 269 t~~~~drcki~~~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 269 TPRFKDRCKIWTAKKMRKCLWKEK 292 (378)
T ss_pred CCcccccchhHHHHHHHHHHHHHh
Confidence 9999999 66666666677643
No 407
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.92 E-value=6.8e-27 Score=267.44 Aligned_cols=286 Identities=21% Similarity=0.213 Sum_probs=234.2
Q ss_pred cchhhcccCCCCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC
Q 001142 5 NSVEITQKSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP 84 (1142)
Q Consensus 5 ~~v~~~~~~~~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP 84 (1142)
.||+..+.+--+ .++.++++.|.|+.|+..+|..-.++++|+|++|.|+.+-...|..+ .+|..|.|++|+|+++|
T Consensus 138 ~sv~se~L~~l~-alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~l---nsL~tlkLsrNrittLp 213 (873)
T KOG4194|consen 138 SSVTSEELSALP-ALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSL---NSLLTLKLSRNRITTLP 213 (873)
T ss_pred ccccHHHHHhHh-hhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccccccccccc---chheeeecccCcccccC
Confidence 345544444444 78899999999999999999999999999999999999887777666 89999999999999998
Q ss_pred c-cccCCcCCcEEEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhc
Q 001142 85 K-SVGRYEKLRNLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIA 161 (1142)
Q Consensus 85 ~-~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~l~~~-~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~ 161 (1142)
. .|.+|++|+.|+|..|+|..+ --.|.+|.+|+.|.|..|.+.-+ ...|..|.++++|+|..|++.. .--.++.
T Consensus 214 ~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~---vn~g~lf 290 (873)
T KOG4194|consen 214 QRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQA---VNEGWLF 290 (873)
T ss_pred HHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhh---hhccccc
Confidence 6 577799999999999999866 44588899999999999996654 4689999999999999965533 3345778
Q ss_pred CCCCCcEEEccCCCCCcc-CcccCCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCcccc-CCCCCCEE
Q 001142 162 GLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPSGLY-LLQRLENL 238 (1142)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~IP~~l~-~L~~L~~L 238 (1142)
+|+.|+.|+|+.|.|..| ++.+.-.++|++|+|++|+|+.+| .+|..|.+|+.|+|++|.++.|-+..+ .+++|+.|
T Consensus 291 gLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~L 370 (873)
T KOG4194|consen 291 GLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKL 370 (873)
T ss_pred ccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhh
Confidence 999999999999999977 677888899999999999999995 678889999999999999998865544 48999999
Q ss_pred eCcCCcCCCCCcc---cccCCCCCCEEEccCCCCCCC-----CCCCchhhccCCCCCCCCCCCCccc
Q 001142 239 DLSNNRLTSLGSL---DLCLMHNLQNLNLQYNKLLSY-----CQVPSWICCNLEGNGKDSSNDDFIS 297 (1142)
Q Consensus 239 ~Ls~N~Ls~~~p~---~l~~L~~L~~L~Ls~N~L~~~-----~~iP~~~~~~l~~n~l~~~~~~~~~ 297 (1142)
||++|.|+..+.+ .|..|++|+.|+|.||+|..+ ..+|..-.+++..|.+-....+.|.
T Consensus 371 dLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe 437 (873)
T KOG4194|consen 371 DLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFE 437 (873)
T ss_pred cCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccc
Confidence 9999999987754 378899999999999999862 2345555566666665555444443
No 408
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=6.7e-24 Score=227.03 Aligned_cols=215 Identities=32% Similarity=0.451 Sum_probs=170.6
Q ss_pred cceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|.+.+.||+|++|.||++... +..+++|+...... . ...+. +.+|++.+.+++|+|++++++++....
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~-~~~~~----~~~e~~~~~~~~~~~i~~~~~~~~~~~--- 70 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKT--E-KQREE----FLREIRILKKLKHPNIVKLYGVFEDPE--- 70 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccc--h-HHHHH----HHHHHHHHHhCCCCChhhheeeeecCC---
Confidence 578899999999999999985 46788887543321 1 12333 478999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCC-CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKH-VSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~-ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..+++|||+++++|.+++... .. +++..+..++.+++.++.|||+++++|+||+|+||+++.+
T Consensus 71 -----------~~~~v~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~ 134 (225)
T smart00221 71 -----------PLYLVMEYCEGGDLFDYLRKK-----GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMD 134 (225)
T ss_pred -----------ceEEEEeccCCCCHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 349999999988999999762 22 7899999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.++|+|||.+........ .......++..|++||.+. ....++.++|||+||+++++|++
T Consensus 135 -------~~~~l~d~g~~~~~~~~~~---------~~~~~~~~~~~~~~pe~~~---~~~~~~~~~Dv~~lG~~~~~l~~ 195 (225)
T smart00221 135 -------GLVKLADFGLARFIHRDLA---------ALLKTVKGTPFYLAPEVLL---GGKGYGEAVDIWSLGVILYELLW 195 (225)
T ss_pred -------CCEEEeeCceeeEecCccc---------ccccceeccCCcCCHhHhc---CCCCCCchhhHHHHHHHHHHHHH
Confidence 7899999999876543210 0112345788899999984 23567789999999999999999
Q ss_pred CCCCCCC-CC-HHHHHHHHHhCCCC
Q 001142 1046 LQVPYMG-LS-ELEIHDLIQMGKRP 1068 (1142)
Q Consensus 1046 G~~Pf~~-~~-~~el~~~I~~~~~p 1068 (1142)
|+.||.. .. ..++.+.+..+..+
T Consensus 196 g~~pf~~~~~~~~~~~~~~~~~~~~ 220 (225)
T smart00221 196 GPEPFSGEGEFTSLLSDVWSFGVPL 220 (225)
T ss_pred CCCCccccchhHHHHHHHHhcCCcc
Confidence 9999976 33 33566777666543
No 409
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=5.1e-25 Score=281.62 Aligned_cols=225 Identities=12% Similarity=0.118 Sum_probs=149.8
Q ss_pred hhCCC-CCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHH
Q 001142 865 GALRH-SCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALV 943 (1142)
Q Consensus 865 ~~L~H-pNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~ 943 (1142)
+.+.| +||+++++++..... + +......+++|||+. ++|.+++.. ....+++.+++.|++||+.||.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~e~~~-~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~ 94 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNL----D---GLDDDSIVRALECED-VSLRQWLDN----PDRSVDAFECFHVFRQIVEIVN 94 (793)
T ss_pred chhhHHHHHHHhhcccCCccc----c---ccccchhhhhhccCC-ccHHHHHhc----ccccccHHHHHHHHHHHHHHHH
Confidence 35556 688888888743210 0 011223578899884 799999964 2346999999999999999999
Q ss_pred HHHhCCccccCCCCCCeeecccccc------------CCCCCeEEEeecCCcccccccccc---cccccCC---CCCCCC
Q 001142 944 ELHSKHIMHRDIKSENILIDLERKK------------ADGKPVVKLCDFDRAVPLRSFLHT---CCIAHRG---IPAPDV 1005 (1142)
Q Consensus 944 yLHs~gIvHrDLKp~NILld~~~~~------------~~~~~~vKL~DFGlA~~l~~~~~~---~~~~~~~---~~~~~~ 1005 (1142)
|||++||+||||||+||||+..+.. ....+.+|++|||+++........ ......+ ......
T Consensus 95 ~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (793)
T PLN00181 95 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQIL 174 (793)
T ss_pred HHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccc
Confidence 9999999999999999999653110 011256777777777543211000 0000000 001122
Q ss_pred ccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccc
Q 001142 1006 CVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEV 1085 (1142)
Q Consensus 1006 ~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~ 1085 (1142)
..||+.|||||++.+ ..|+.++|||||||+||||++|..|+... ......+.....+..
T Consensus 175 ~~gt~~Y~APE~~~~----~~~~~~sDVwSlGviL~ELl~~~~~~~~~--~~~~~~~~~~~~~~~--------------- 233 (793)
T PLN00181 175 AMEMSWYTSPEEDNG----SSSNCASDVYRLGVLLFELFCPVSSREEK--SRTMSSLRHRVLPPQ--------------- 233 (793)
T ss_pred cCCCcceEChhhhcc----CCCCchhhhhhHHHHHHHHhhCCCchhhH--HHHHHHHHHhhcChh---------------
Confidence 468999999999876 56899999999999999999998887532 112222211111100
Q ss_pred cccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1086 AQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1086 ~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
.........+++.+||+.||.+||++.|+++|+|+..
T Consensus 234 ------------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 234 ------------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred ------------hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence 0011223567889999999999999999999999864
No 410
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.90 E-value=1.1e-25 Score=257.72 Aligned_cols=161 Identities=28% Similarity=0.356 Sum_probs=127.4
Q ss_pred CchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCC
Q 001142 106 FPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGC 185 (1142)
Q Consensus 106 lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~ 185 (1142)
||.++..|.+|..+||+.|++...|..+..+.+|+.|+||+|.+.. +--..+.+.+|+.|+|++|+++.+|..+..
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~ite----L~~~~~~W~~lEtLNlSrNQLt~LP~avcK 289 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITE----LNMTEGEWENLETLNLSRNQLTVLPDAVCK 289 (1255)
T ss_pred CCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceee----eeccHHHHhhhhhhccccchhccchHHHhh
Confidence 3444444555555555555555555555556666666666644332 222334556777888888888889999999
Q ss_pred CCCCCEEEccCCCCC--ccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEE
Q 001142 186 LSNLEQLDLSFNKMK--YLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLN 263 (1142)
Q Consensus 186 L~~L~~L~Ls~N~L~--~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~ 263 (1142)
|++|+.|++.+|+|+ .||+.|+.|.+|+.+.+++|.|.-+|.++..|..|+.|.|++|+|-.+|. .+.-|+.|+.||
T Consensus 290 L~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElVPEglcRC~kL~kL~L~~NrLiTLPe-aIHlL~~l~vLD 368 (1255)
T KOG0444|consen 290 LTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELVPEGLCRCVKLQKLKLDHNRLITLPE-AIHLLPDLKVLD 368 (1255)
T ss_pred hHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccccCchhhhhhHHHHHhcccccceeechh-hhhhcCCcceee
Confidence 999999999999998 89999999999999999999999999999999999999999999998764 899999999999
Q ss_pred ccCCCCCC
Q 001142 264 LQYNKLLS 271 (1142)
Q Consensus 264 Ls~N~L~~ 271 (1142)
|..|+=--
T Consensus 369 lreNpnLV 376 (1255)
T KOG0444|consen 369 LRENPNLV 376 (1255)
T ss_pred ccCCcCcc
Confidence 99998544
No 411
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=4.3e-23 Score=214.64 Aligned_cols=168 Identities=24% Similarity=0.307 Sum_probs=126.3
Q ss_pred CCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccc
Q 001142 909 GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRS 988 (1142)
Q Consensus 909 gSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~ 988 (1142)
|||.++++.. ...+++..++.|+.||+.||.|||+++ ||+|||++.+ +.+|+ ||.+.....
T Consensus 1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~-------~~~~~--fG~~~~~~~ 61 (176)
T smart00750 1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWD-------GLLKL--DGSVAFKTP 61 (176)
T ss_pred CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCc-------cceee--ccceEeecc
Confidence 6899999752 346999999999999999999999998 9999999887 77888 999865432
Q ss_pred cccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCC
Q 001142 989 FLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSEL-EIHDLIQMGKR 1067 (1142)
Q Consensus 989 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~-el~~~I~~~~~ 1067 (1142)
. ...||+.|||||++.+ ..++.++|||||||++|||++|+.||...... .....+.....
T Consensus 62 ~---------------~~~g~~~y~aPE~~~~----~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 122 (176)
T smart00750 62 E---------------QSRVDPYFMAPEVIQG----QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP 122 (176)
T ss_pred c---------------cCCCcccccChHHhcC----CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc
Confidence 1 1248899999999976 56889999999999999999999999754322 22222222111
Q ss_pred CCchhHHhhhcccccccccccCCCCCCchhhhhhHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1068 PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS--FLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1068 p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+..+.. .. ....... .+.+++.+||..||.+||++.|+++|+|....
T Consensus 123 ~~~~~~--------------------~~-~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 123 ADDPRD--------------------RS-NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred cCCccc--------------------cc-cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 110000 00 0012222 68999999999999999999999999998754
No 412
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.89 E-value=7.4e-26 Score=250.15 Aligned_cols=243 Identities=27% Similarity=0.359 Sum_probs=184.6
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1142)
.++++.+..|.+..+. ..+.++..|.+|++++|+++..+|. + +.+..++.|+.++|++.++|++++.+.+|..|+
T Consensus 46 ~l~~lils~N~l~~l~-~dl~nL~~l~vl~~~~n~l~~lp~a-i---g~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~ 120 (565)
T KOG0472|consen 46 DLQKLILSHNDLEVLR-EDLKNLACLTVLNVHDNKLSQLPAA-I---GELEALKSLNVSHNKLSELPEQIGSLISLVKLD 120 (565)
T ss_pred chhhhhhccCchhhcc-HhhhcccceeEEEeccchhhhCCHH-H---HHHHHHHHhhcccchHhhccHHHhhhhhhhhhh
Confidence 3677888999999886 4678999999999999999977665 4 444889999999999999999999999999999
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCC
Q 001142 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1142)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1142)
.++|.+.++|++++.+..|..|+..+|++...|..+..+.+|..|++.+|.+ ..+|+..-+++.|+.|+..+|-++
T Consensus 121 ~s~n~~~el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l----~~l~~~~i~m~~L~~ld~~~N~L~ 196 (565)
T KOG0472|consen 121 CSSNELKELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKL----KALPENHIAMKRLKHLDCNSNLLE 196 (565)
T ss_pred ccccceeecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccch----hhCCHHHHHHHHHHhcccchhhhh
Confidence 9999999999999999999999999999999998888888888888887443 334444444666677777777777
Q ss_pred ccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCcccc-CCCCCCEEeCcCCcCCCCCcccccCC
Q 001142 178 YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLY-LLQRLENLDLSNNRLTSLGSLDLCLM 256 (1142)
Q Consensus 178 ~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~-~L~~L~~L~Ls~N~Ls~~~p~~l~~L 256 (1142)
.+|+.++.|.+|..|||.+|+|..+| +|..+..|.+|+++.|+|+.+|.+.. +|.+|..|||..|+|+..|. .++.+
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pd-e~clL 274 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPD-EICLL 274 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCch-HHHHh
Confidence 77777777777777777777776666 56666666666666666666666655 46666666666666666543 55666
Q ss_pred CCCCEEEccCCCCCC
Q 001142 257 HNLQNLNLQYNKLLS 271 (1142)
Q Consensus 257 ~~L~~L~Ls~N~L~~ 271 (1142)
.+|..||+|+|.+++
T Consensus 275 rsL~rLDlSNN~is~ 289 (565)
T KOG0472|consen 275 RSLERLDLSNNDISS 289 (565)
T ss_pred hhhhhhcccCCcccc
Confidence 666666666666665
No 413
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.88 E-value=2.3e-24 Score=238.47 Aligned_cols=123 Identities=20% Similarity=0.255 Sum_probs=83.6
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcccc-CCcCCcEEE
Q 001142 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVG-RYEKLRNLK 97 (1142)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~-~L~~L~~L~ 97 (1142)
+++|+...|-++.++ ..++++..|..|||.+|+|...+ + | .++..|.+|++..|.|..+|.+.. +|.+|.+||
T Consensus 185 L~~ld~~~N~L~tlP-~~lg~l~~L~~LyL~~Nki~~lP-e-f---~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLD 258 (565)
T KOG0472|consen 185 LKHLDCNSNLLETLP-PELGGLESLELLYLRRNKIRFLP-E-F---PGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLD 258 (565)
T ss_pred HHhcccchhhhhcCC-hhhcchhhhHHHHhhhcccccCC-C-C---CccHHHHHHHhcccHHHhhHHHHhcccccceeee
Confidence 455555555555554 35666667777777777766433 2 3 344667777777777777776644 677777777
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001142 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1142)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~ 148 (1142)
|..|+|+++|.++.-|.+|.+||+++|.++.+|..+++| .|+.|.+.+|+
T Consensus 259 LRdNklke~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNP 308 (565)
T KOG0472|consen 259 LRDNKLKEVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNP 308 (565)
T ss_pred ccccccccCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCc
Confidence 777777777777777777777777777777777777777 77777777665
No 414
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.6e-20 Score=215.69 Aligned_cols=270 Identities=21% Similarity=0.212 Sum_probs=188.2
Q ss_pred CcceeeeecccCceEEEEEEECCc---cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC----CCccceeeeEe
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGSA---DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH----SCIVEMYGHKI 880 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~~---~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H----pNIVkl~g~~~ 880 (1142)
.|.+.++||+|+||.||+|..... .+|+|+.......... . +..|+.++..+.. +++..+++.+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~----~----l~~E~~vl~~l~~~~~~~~~~~~~~~G~ 90 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS----V----LKIEIQVLKKLEKKNGPSHFPKLLDHGR 90 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc----c----chhHHHHHHHHhhhcCCCCCCEEEEecc
Confidence 899999999999999999998554 5788875433221111 1 2568888888762 58888888874
Q ss_pred -cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 881 -SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 881 -~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
... ..++||+.+ |.+|.++.... +...++...+.+|+.|++.+|++||+.|++||||||.|
T Consensus 91 ~~~~--------------~~~iVM~l~-G~sL~dl~~~~---~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N 152 (322)
T KOG1164|consen 91 STED--------------FNFIVMSLL-GPSLEDLRKRN---PPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPEN 152 (322)
T ss_pred CCCc--------------eeEEEEecc-CccHHHHHHhC---CCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHH
Confidence 333 239999999 79999988652 24679999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
+++.... ......+.|.|||+|+.....................+.||..|+++.+..+ ...+.+.|+||++.+
T Consensus 153 ~~~g~~~--~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~----~e~~r~DDles~~Y~ 226 (322)
T KOG1164|consen 153 FVVGQSS--RSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG----IEQGRRDDLESLFYM 226 (322)
T ss_pred eeecCCC--CcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCC----CccCCchhhhhHHHH
Confidence 9997652 0111469999999998433211111000011111345669999999999876 567899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+.|+..|..||.+.........+........... .....+..+.++...+-..+...
T Consensus 227 l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~ 283 (322)
T KOG1164|consen 227 LLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDR-----------------------FGDLKPEEFAKILEYIDSLDYED 283 (322)
T ss_pred HHHHhcCCCCCccccccchHHHHHHHhhhhcccc-----------------------ccCCChHHHHHHHHHhhccCCcC
Confidence 9999999999976543222222211110000000 00023445677777777789999
Q ss_pred CCCHHHHHHHHHh
Q 001142 1120 RPTAGDLYEMFVA 1132 (1142)
Q Consensus 1120 RPSa~EVL~~L~~ 1132 (1142)
+|....+...+..
T Consensus 284 ~Pdy~~~~~~l~~ 296 (322)
T KOG1164|consen 284 KPDYEKLAELLKD 296 (322)
T ss_pred CCCHHHHHHHHHH
Confidence 9999888776544
No 415
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.86 E-value=1.4e-23 Score=232.33 Aligned_cols=270 Identities=22% Similarity=0.273 Sum_probs=220.1
Q ss_pred CCCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEee-cCCCCccCc-cccCCc
Q 001142 14 PEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLY-KNVLNLIPK-SVGRYE 91 (1142)
Q Consensus 14 ~~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls-~N~Lt~iP~-~l~~L~ 91 (1142)
+-|+.+..|.++.|.|+.|++++|+.+++|+.||||+|+|+.+-|..|..+ .+|..|-|. +|+|+.||. .|.+|.
T Consensus 64 ~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL---~~l~~Lvlyg~NkI~~l~k~~F~gL~ 140 (498)
T KOG4237|consen 64 NLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGL---ASLLSLVLYGNNKITDLPKGAFGGLS 140 (498)
T ss_pred cCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhh---HhhhHHHhhcCCchhhhhhhHhhhHH
Confidence 345568889999999999999999999999999999999999999887655 777777665 599999996 699999
Q ss_pred CCcEEEccCCCCCcCc-hhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCC---C------Ccccchhhh
Q 001142 92 KLRNLKFFGNEINLFP-SEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPR---P------SVLTLLSEI 160 (1142)
Q Consensus 92 ~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~n~~n---~------~~~~lp~~l 160 (1142)
+|+.|.|.-|++.-++ ..|..|++|..|.|..|.+..+.. +|..+..++.|.+..|++- + .....|..+
T Consensus 141 slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~iet 220 (498)
T KOG4237|consen 141 SLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIET 220 (498)
T ss_pred HHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhc
Confidence 9999999999999665 458889999999999999888875 8999999999999887721 1 111223333
Q ss_pred cCCCCCcEEEccC--------------------------CCCCccCc-ccCCCCCCCEEEccCCCCCcc-chhhcCCCCC
Q 001142 161 AGLKCLTKLSVCH--------------------------FSIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKAL 212 (1142)
Q Consensus 161 ~~L~~L~~L~Ls~--------------------------N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L 212 (1142)
+......-..+.+ +....-|. .|..|++|+.|+|++|+|+.| +.+|..+..|
T Consensus 221 sgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l 300 (498)
T KOG4237|consen 221 SGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAEL 300 (498)
T ss_pred ccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhh
Confidence 3332222222222 22222344 578899999999999999988 7889999999
Q ss_pred CEEEccCCCCCccCcccc-CCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhccCCCC
Q 001142 213 ISLKVANNKLVELPSGLY-LLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGN 286 (1142)
Q Consensus 213 ~~L~Ls~N~Ls~IP~~l~-~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n 286 (1142)
+.|.|..|+|..+-..++ ++..|+.|+|.+|+|+.+.|..|..+.+|..|+|-.|+|.|.|.+-+.-.|+-...
T Consensus 301 ~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~ 375 (498)
T KOG4237|consen 301 QELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKS 375 (498)
T ss_pred hhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCC
Confidence 999999999998866655 59999999999999999999999999999999999999999999887766765544
No 416
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=2.5e-20 Score=202.80 Aligned_cols=217 Identities=22% Similarity=0.278 Sum_probs=171.4
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~ 884 (1142)
.|+++++||+|+||+++.|+. ++..||+|....+. ..+ ++ ..|.+..+.|. .+.|..+|-+..+..
T Consensus 29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS---~AP---QL----rdEYr~YKlL~g~~GIP~vYYFGqeG~- 97 (449)
T KOG1165|consen 29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS---EAP---QL----RDEYRTYKLLGGTEGIPQVYYFGQEGK- 97 (449)
T ss_pred cceeccccccCcceeeecccccccCceEEEEeccccC---Ccc---hH----HHHHHHHHHHcCCCCCCceeeeccccc-
Confidence 589999999999999999986 78899999754332 222 22 56888888884 789998887665433
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+-.||||++ |.||++++.-+ +..|+.+.+..||.|++.-++|+|++.+|+|||||+|+||..
T Consensus 98 -------------~NiLVidLL-GPSLEDLFD~C----gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGr 159 (449)
T KOG1165|consen 98 -------------YNILVIDLL-GPSLEDLFDLC----GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGR 159 (449)
T ss_pred -------------hhhhhhhhh-CcCHHHHHHHh----cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecC
Confidence 238999999 79999998763 467999999999999999999999999999999999999976
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
.+ ......+.++|||+|+.+.+.... .+.+........||..||+-....+ ..-+.+-|+-|+|.++...|
T Consensus 160 p~--~k~~n~IhiiDFGmAK~YrDp~Tk---qHIPYrE~KSLsGTARYMSINTHlG----rEQSRRDDLEaLGHvFmYFL 230 (449)
T KOG1165|consen 160 PG--TKDANVIHIIDFGMAKEYRDPKTK---QHIPYREHKSLSGTARYMSINTHLG----REQSRRDDLEALGHVFMYFL 230 (449)
T ss_pred CC--CCCCceEEEEeccchhhhcCcccc---ccCccccccccccceeeeEeecccc----chhhhhhhHHHhhhhhhhhc
Confidence 53 233467999999999987765432 2333334456679999999888776 45578999999999999999
Q ss_pred hCCCCCCCCC---HHHHHHHH
Q 001142 1045 TLQVPYMGLS---ELEIHDLI 1062 (1142)
Q Consensus 1045 tG~~Pf~~~~---~~el~~~I 1062 (1142)
-|..||++.. ..+-++.|
T Consensus 231 RGsLPWQGLKA~tnK~kYeKI 251 (449)
T KOG1165|consen 231 RGSLPWQGLKADTNKEKYEKI 251 (449)
T ss_pred cCCCccccccCcchHHHHHHh
Confidence 9999999753 34445555
No 417
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=1.4e-19 Score=199.94 Aligned_cols=273 Identities=31% Similarity=0.396 Sum_probs=196.1
Q ss_pred cceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCC-CccceeeeEecCCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS-CIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp-NIVkl~g~~~~~~~~~~ 887 (1142)
|.+.+.||.|+||.||++.+. ..+++|+...... ... .....+.+|+.++..+.|+ +|+++++++....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~--~~~---~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~---- 71 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLE--SKS---KEVERFLREIQILASLNHPPNIVKLYDFFQDEG---- 71 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhc--cch---hHHHHHHHHHHHHHHccCCcceeeEEEEEecCC----
Confidence 788999999999999999988 6667776543322 111 1223348999999999977 7999999985433
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
..+++++|+.++++.+++...... ..++...+..++.|++.++.|+|+.+++|||+||+||+++..
T Consensus 72 ----------~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~-- 137 (384)
T COG0515 72 ----------SLYLVMEYVDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRD-- 137 (384)
T ss_pred ----------EEEEEEecCCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCC--
Confidence 259999999999999777652111 268999999999999999999999999999999999999876
Q ss_pred cCCCCC-eEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 968 KADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 968 ~~~~~~-~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
. .++++|||.+............ ........||..|+|||.+.+.. ...+....|+||+|++++++++|
T Consensus 138 -----~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~~t~~~~~pe~~~~~~-~~~~~~~~D~~s~g~~~~~~~~~ 207 (384)
T COG0515 138 -----GRVVKLIDFGLAKLLPDPGSTSSI----PALPSTSVGTPGYMAPEVLLGLS-LAYASSSSDIWSLGITLYELLTG 207 (384)
T ss_pred -----CCeEEEeccCcceecCCCCccccc----cccccccccccccCCHHHhcCCC-CCCCCchHhHHHHHHHHHHHHhC
Confidence 4 6999999999754432211000 01224567999999999987521 13567899999999999999999
Q ss_pred CCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1047 QVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1047 ~~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
..||..... ......+.....+....... ... . ......+.+++..|+..+|..|.+
T Consensus 208 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~--~---~~~~~~~~~~~~~~~~~~~~~r~~ 268 (384)
T COG0515 208 LPPFEGEKNSSATSQTLKIILELPTPSLASPLS--------------PSN--P---ELISKAASDLLKKLLAKDPKNRLS 268 (384)
T ss_pred CCCCCCCCccccHHHHHHHHHhcCCcccccccC--------------ccc--c---chhhHHHHHHHHHHHhcCchhcCC
Confidence 999876542 34444443333220000000 000 0 122356889999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001142 1123 AGDLYEMFVART 1134 (1142)
Q Consensus 1123 a~EVL~~L~~~~ 1134 (1142)
+.+...+.+...
T Consensus 269 ~~~~~~~~~~~~ 280 (384)
T COG0515 269 SSSDLSHDLLAH 280 (384)
T ss_pred HHHHhhchHhhC
Confidence 998887755443
No 418
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=6.5e-22 Score=242.41 Aligned_cols=270 Identities=19% Similarity=0.204 Sum_probs=190.4
Q ss_pred CCc-ceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 807 PSL-SSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y-~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+.| ....++|.|++|.|+.+.. .....+.|.++++ .. .......+...+..|+-+-..++|||++..+..+.+..
T Consensus 317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~-~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~ 394 (601)
T KOG0590|consen 317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VK-PTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID 394 (601)
T ss_pred cccCCccceeeecccCceEEEEecCCCccchhhhhhcc-cC-CcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc
Confidence 445 6788999999998877764 2222334433322 11 22233333333577888888999999988877766533
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. .-+||||++ +|..++.. ...++..++..++.|++.|++|||..||.|||||++|+++.
T Consensus 395 ~~--------------~~~mE~~~~-Dlf~~~~~-----~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~ 454 (601)
T KOG0590|consen 395 GI--------------LQSMEYCPY-DLFSLVMS-----NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT 454 (601)
T ss_pred cc--------------hhhhhcccH-HHHHHHhc-----ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe
Confidence 22 334999998 99999976 24688999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC-CchhhHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY-GLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~-s~ksDVwSLGviL~E 1042 (1142)
.. +.+||+|||.+......... ........+|+..|+|||++.+ ..| ....||||.|+++..
T Consensus 455 ~~-------g~lki~Dfg~~~vf~~~~e~------~~~~~~g~~gS~pY~apE~~~~----~~ydpr~vDiwS~~ii~~~ 517 (601)
T KOG0590|consen 455 EN-------GILKIIDFGAASVFRYPWEK------NIHESSGIVGSDPYLAPEVLTG----KEYDPRAVDVWSCGIIYIC 517 (601)
T ss_pred cC-------CceEEeecCcceeeccCcch------hhhhhcCcccCCcCcCcccccc----cccCcchhhhhhccceEEE
Confidence 88 79999999999765433221 0112335679999999999886 344 467999999999999
Q ss_pred HHhCCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++|+.||......+.. ............ ..........+...+.+|.+||++||.+|.
T Consensus 518 m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ 577 (601)
T KOG0590|consen 518 MILGRFPWKVAKKSDNSFKTNNYSDQRNIF--------------------EGPNRLLSLLPRETRIIIYRMLQLDPTKRI 577 (601)
T ss_pred EecCCCccccccccccchhhhccccccccc--------------------cChHHHHHhchhhHHHHHHHHccCChhhee
Confidence 99999999743222111 010000000000 000111125566788999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+++|++..|++.-
T Consensus 578 ti~~i~~d~W~~~i 591 (601)
T KOG0590|consen 578 TIEQILNDEWIRSI 591 (601)
T ss_pred cHHHHhhChHhhhc
Confidence 99999999999853
No 419
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=3.9e-21 Score=239.79 Aligned_cols=223 Identities=22% Similarity=0.265 Sum_probs=170.7
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEc
Q 001142 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKF 98 (1142)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~L 98 (1142)
...|.+..+.|+.++.. + .++|+.|+|++|+|+.++...+ ++|++|+|++|+|+.||..+.. +|+.|+|
T Consensus 180 ~~~L~L~~~~LtsLP~~-I--p~~L~~L~Ls~N~LtsLP~~l~------~nL~~L~Ls~N~LtsLP~~l~~--~L~~L~L 248 (754)
T PRK15370 180 KTELRLKILGLTTIPAC-I--PEQITTLILDNNELKSLPENLQ------GNIKTLYANSNQLTSIPATLPD--TIQEMEL 248 (754)
T ss_pred ceEEEeCCCCcCcCCcc-c--ccCCcEEEecCCCCCcCChhhc------cCCCEEECCCCccccCChhhhc--cccEEEC
Confidence 45677778888877643 2 2478899999999886543322 5789999999999988876643 7889999
Q ss_pred cCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc
Q 001142 99 FGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1142)
Q Consensus 99 s~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1142)
++|+|+.||..+. ++|+.|+|++|++..+|..+. .+|+.|+|++|.+.. +|..+. ++|+.|++++|+|+.
T Consensus 249 s~N~L~~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~----LP~~lp--~sL~~L~Ls~N~Lt~ 318 (754)
T PRK15370 249 SINRITELPERLP--SALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRT----LPAHLP--SGITHLNVQSNSLTA 318 (754)
T ss_pred cCCccCcCChhHh--CCCCEEECcCCccCccccccC--CCCcEEECCCCcccc----Ccccch--hhHHHHHhcCCcccc
Confidence 9999998888775 578899999888887776543 478999998876653 343332 367788888998888
Q ss_pred cCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCC
Q 001142 179 LPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHN 258 (1142)
Q Consensus 179 IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~ 258 (1142)
+|..+. ++|+.|++++|.|+.||..+. ++|+.|+|++|+|+.||..+. ++|+.|+|++|+|+.+|+. +. ..
T Consensus 319 LP~~l~--~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~~LP~~lp--~~L~~LdLs~N~Lt~LP~~-l~--~s 389 (754)
T PRK15370 319 LPETLP--PGLKTLEAGENALTSLPASLP--PELQVLDVSKNQITVLPETLP--PTITTLDVSRNALTNLPEN-LP--AA 389 (754)
T ss_pred CCcccc--ccceeccccCCccccCChhhc--CcccEEECCCCCCCcCChhhc--CCcCEEECCCCcCCCCCHh-HH--HH
Confidence 887543 678888999999888887664 688899999999888887664 5788999999998887663 32 36
Q ss_pred CCEEEccCCCCCC
Q 001142 259 LQNLNLQYNKLLS 271 (1142)
Q Consensus 259 L~~L~Ls~N~L~~ 271 (1142)
|+.|++++|+|+.
T Consensus 390 L~~LdLs~N~L~~ 402 (754)
T PRK15370 390 LQIMQASRNNLVR 402 (754)
T ss_pred HHHHhhccCCccc
Confidence 8888899998886
No 420
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.84 E-value=1.4e-20 Score=233.65 Aligned_cols=213 Identities=25% Similarity=0.213 Sum_probs=120.5
Q ss_pred ccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEcc
Q 001142 20 EKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFF 99 (1142)
Q Consensus 20 ~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls 99 (1142)
..|.+..|+|+.++.. +. ++|+.|+|++|+|+.+ |.. +++|++|+|++|+|+.||.. .++|+.|+|+
T Consensus 204 ~~LdLs~~~LtsLP~~-l~--~~L~~L~L~~N~Lt~L-P~l------p~~Lk~LdLs~N~LtsLP~l---p~sL~~L~Ls 270 (788)
T PRK15387 204 AVLNVGESGLTTLPDC-LP--AHITTLVIPDNNLTSL-PAL------PPELRTLEVSGNQLTSLPVL---PPGLLELSIF 270 (788)
T ss_pred cEEEcCCCCCCcCCcc-hh--cCCCEEEccCCcCCCC-CCC------CCCCcEEEecCCccCcccCc---ccccceeecc
Confidence 3456666666666542 22 3567777777777653 321 25667777777777766643 2356667777
Q ss_pred CCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCcc
Q 001142 100 GNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL 179 (1142)
Q Consensus 100 ~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~I 179 (1142)
+|.|+.+|..+ ++|+.|+|++|++..+|.. +++|+.|+|++|.+.. +|.. ..+|+.|++++|+|+.|
T Consensus 271 ~N~L~~Lp~lp---~~L~~L~Ls~N~Lt~LP~~---p~~L~~LdLS~N~L~~----Lp~l---p~~L~~L~Ls~N~L~~L 337 (788)
T PRK15387 271 SNPLTHLPALP---SGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQLAS----LPAL---PSELCKLWAYNNQLTSL 337 (788)
T ss_pred CCchhhhhhch---hhcCEEECcCCcccccccc---ccccceeECCCCcccc----CCCC---cccccccccccCccccc
Confidence 77766666532 4566666666666655532 3556666666654432 2221 12345556666666666
Q ss_pred CcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCC
Q 001142 180 PPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNL 259 (1142)
Q Consensus 180 P~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L 259 (1142)
|.. ..+|+.|+|++|+|+.||.. ..+|+.|++++|+|+.||... .+|+.|+|++|+|+++++ . .++|
T Consensus 338 P~l---p~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~~LP~l~---~~L~~LdLs~N~Lt~LP~-l---~s~L 404 (788)
T PRK15387 338 PTL---PSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTSLPALP---SGLKELIVSGNRLTSLPV-L---PSEL 404 (788)
T ss_pred ccc---ccccceEecCCCccCCCCCC---CcccceehhhccccccCcccc---cccceEEecCCcccCCCC-c---ccCC
Confidence 541 23566666666666666542 234555666666666665432 345666666666665443 1 2456
Q ss_pred CEEEccCCCCCC
Q 001142 260 QNLNLQYNKLLS 271 (1142)
Q Consensus 260 ~~L~Ls~N~L~~ 271 (1142)
+.|+|++|+|+.
T Consensus 405 ~~LdLS~N~Lss 416 (788)
T PRK15387 405 KELMVSGNRLTS 416 (788)
T ss_pred CEEEccCCcCCC
Confidence 666666666655
No 421
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.83 E-value=9e-21 Score=236.51 Aligned_cols=225 Identities=19% Similarity=0.247 Sum_probs=96.0
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEc
Q 001142 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKF 98 (1142)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~L 98 (1142)
+..|.+..|+|+.++...+ ++|++|+|++|+|+.+ |..+. .+|+.|+|++|.|+.||..+. .+|+.|+|
T Consensus 201 L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~LtsL-P~~l~-----~~L~~L~Ls~N~L~~LP~~l~--s~L~~L~L 269 (754)
T PRK15370 201 ITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTSI-PATLP-----DTIQEMELSINRITELPERLP--SALQSLDL 269 (754)
T ss_pred CcEEEecCCCCCcCChhhc---cCCCEEECCCCccccC-Chhhh-----ccccEEECcCCccCcCChhHh--CCCCEEEC
Confidence 4444444444444443322 2444455555544432 22111 234445555554444444432 24445555
Q ss_pred cCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc
Q 001142 99 FGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1142)
Q Consensus 99 s~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1142)
++|+|+.||..+. .+|+.|+|++|++..+|..+. .+|+.|++++|.+.. +|..+ .++|+.|++++|.|+.
T Consensus 270 s~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~Lt~----LP~~l--~~sL~~L~Ls~N~Lt~ 339 (754)
T PRK15370 270 FHNKISCLPENLP--EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLTA----LPETL--PPGLKTLEAGENALTS 339 (754)
T ss_pred cCCccCccccccC--CCCcEEECCCCccccCcccch--hhHHHHHhcCCcccc----CCccc--cccceeccccCCcccc
Confidence 5555544444332 244445554444444433221 234444444433321 22211 1344444455554444
Q ss_pred cCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCc---ccccC
Q 001142 179 LPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS---LDLCL 255 (1142)
Q Consensus 179 IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p---~~l~~ 255 (1142)
+|..+. ++|+.|+|++|+|+.+|..+. ++|+.|+|++|+|+.||..+. ..|+.|++++|+|++++. ..+..
T Consensus 340 LP~~l~--~sL~~L~Ls~N~L~~LP~~lp--~~L~~LdLs~N~Lt~LP~~l~--~sL~~LdLs~N~L~~LP~sl~~~~~~ 413 (754)
T PRK15370 340 LPASLP--PELQVLDVSKNQITVLPETLP--PTITTLDVSRNALTNLPENLP--AALQIMQASRNNLVRLPESLPHFRGE 413 (754)
T ss_pred CChhhc--CcccEEECCCCCCCcCChhhc--CCcCEEECCCCcCCCCCHhHH--HHHHHHhhccCCcccCchhHHHHhhc
Confidence 444332 344455555555444444332 344455555555544444433 134444455555443321 11222
Q ss_pred CCCCCEEEccCCCCC
Q 001142 256 MHNLQNLNLQYNKLL 270 (1142)
Q Consensus 256 L~~L~~L~Ls~N~L~ 270 (1142)
++.+..|+|.+|+|+
T Consensus 414 ~~~l~~L~L~~Npls 428 (754)
T PRK15370 414 GPQPTRIIVEYNPFS 428 (754)
T ss_pred CCCccEEEeeCCCcc
Confidence 344444555555443
No 422
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.83 E-value=6.5e-21 Score=201.79 Aligned_cols=259 Identities=25% Similarity=0.337 Sum_probs=197.8
Q ss_pred CCCCCCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 799 SGLDPGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 799 ~~~~~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
..+...++.++.+.-+|.+...|..|+|+|.+.++++|+..+.. ......++| ..|.-.|+-+.||||..++|.
T Consensus 182 sr~~gid~~~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~--~t~risrdf----neefp~lrifshpnilpvlga 255 (448)
T KOG0195|consen 182 SRYTGIDVSSLNLITKLAESHSGELWRGRWQGNDIVAKILNVRE--VTARISRDF----NEEFPALRIFSHPNILPVLGA 255 (448)
T ss_pred ccccCcchhhhhhhhhhccCCCcccccccccCcchhhhhhhhhh--cchhhcchh----hhhCcceeeecCCchhhhhhh
Confidence 34445567778889999999999999999999999999865443 333334455 678888888899999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-C-ccccCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-H-IMHRDIK 956 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-g-IvHrDLK 956 (1142)
+.... ++.++..|++.|||+..++. ......+..++.+++.+|++|++|||+. . |.---|.
T Consensus 256 cnspp--------------nlv~isq~mp~gslynvlhe---~t~vvvd~sqav~faldiargmaflhslep~ipr~~ln 318 (448)
T KOG0195|consen 256 CNSPP--------------NLVIISQYMPFGSLYNVLHE---QTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLN 318 (448)
T ss_pred ccCCC--------------CceEeeeeccchHHHHHHhc---CccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcc
Confidence 97643 45999999999999999986 3445678899999999999999999986 3 4445688
Q ss_pred CCCeeeccccccCCCCCeEEE--eecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHH
Q 001142 957 SENILIDLERKKADGKPVVKL--CDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIW 1034 (1142)
Q Consensus 957 p~NILld~~~~~~~~~~~vKL--~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVw 1034 (1142)
+..|+||++ .+.+| +|--++.. .....-.|.||+||.++.... ..--.++|+|
T Consensus 319 s~hvmided-------ltarismad~kfsfq-----------------e~gr~y~pawmspealqrkpe-d~n~raadmw 373 (448)
T KOG0195|consen 319 SKHVMIDED-------LTARISMADTKFSFQ-----------------EVGRAYSPAWMSPEALQRKPE-DLNIRAADMW 373 (448)
T ss_pred cceEEecch-------hhhheecccceeeee-----------------ccccccCcccCCHHHHhcCch-hcchhhhhHH
Confidence 999999987 44443 33222210 112235788999999976321 1223689999
Q ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1035 SYGCLLLELLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1035 SLGviL~ELLtG~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
||.+++|||.|...||...++.+.--.| ..+.++.++. ..+..+..|+.-|+
T Consensus 374 sfaillwel~trevpfadlspmecgmkialeglrv~ipp---------------------------gis~hm~klm~icm 426 (448)
T KOG0195|consen 374 SFAILLWELNTREVPFADLSPMECGMKIALEGLRVHIPP---------------------------GISRHMNKLMNICM 426 (448)
T ss_pred HHHHHHHHhhccccccccCCchhhhhhhhhccccccCCC---------------------------CccHHHHHHHHHHh
Confidence 9999999999999999988888765444 4454444331 55667899999999
Q ss_pred ccCCCCCCCHHHHHHHHHh
Q 001142 1114 EENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~ 1132 (1142)
..||.+||.++.|+-.++.
T Consensus 427 nedpgkrpkfdmivpilek 445 (448)
T KOG0195|consen 427 NEDPGKRPKFDMIVPILEK 445 (448)
T ss_pred cCCCCcCCCcceehhhHHH
Confidence 9999999999998877654
No 423
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.83 E-value=7.2e-23 Score=204.38 Aligned_cols=164 Identities=25% Similarity=0.364 Sum_probs=122.0
Q ss_pred CCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECC
Q 001142 66 GDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELS 145 (1142)
Q Consensus 66 ~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls 145 (1142)
.+.+++.|.||+|+|+.+|+.|..|.+|+.|++++|+|+.+|..++.|++|+.|+++.|++...|..|+.++.|+.|||.
T Consensus 31 ~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprgfgs~p~levldlt 110 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRGFGSFPALEVLDLT 110 (264)
T ss_pred chhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccccCCCchhhhhhcc
Confidence 45789999999999999999999999999999999999999999999999999999999888888777777777777776
Q ss_pred CCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCcc
Q 001142 146 KVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL 225 (1142)
Q Consensus 146 ~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~I 225 (1142)
+|.++. ..+|..|..++.|+.|+|+.|.+..+|..+++|++|+.|.|.+|.|-++|.+++.|++|++|++.+|+|+.+
T Consensus 111 ynnl~e--~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl~vl 188 (264)
T KOG0617|consen 111 YNNLNE--NSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLTVL 188 (264)
T ss_pred cccccc--ccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccceeeec
Confidence 655432 235555555666666666666666666666666666666666666666666666666666666666666666
Q ss_pred CccccC
Q 001142 226 PSGLYL 231 (1142)
Q Consensus 226 P~~l~~ 231 (1142)
|+++++
T Consensus 189 ppel~~ 194 (264)
T KOG0617|consen 189 PPELAN 194 (264)
T ss_pred Chhhhh
Confidence 655554
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=1.7e-19 Score=188.92 Aligned_cols=211 Identities=18% Similarity=0.228 Sum_probs=162.4
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC-CCccceeeeEec
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH-SCIVEMYGHKIS 881 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H-pNIVkl~g~~~~ 881 (1142)
-...|.++++||.|+||.+|+|.. .+..||+|+..-+. ..+ . +..|..+...|+| ..|..+..++.+
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a---~hp---q----L~yEskvY~iL~~g~GiP~i~~y~~e 82 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA---KHP---Q----LLYESKVYRILQGGVGIPHIRHYGTE 82 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC---CCc---c----hhHHHHHHHHhccCCCCchhhhhccc
Confidence 356799999999999999999987 67889999754322 122 1 2578888888864 556666556555
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
..+- .+||+++ |.||++++.-+ ...++..+++.++-|++.-++|+|.+++|||||||+|+|
T Consensus 83 ~~yn--------------vlVMdLL-GPsLEdLfnfC----~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFL 143 (341)
T KOG1163|consen 83 KDYN--------------VLVMDLL-GPSLEDLFNFC----SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFL 143 (341)
T ss_pred cccc--------------eeeeecc-CccHHHHHHHH----hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCcccee
Confidence 4432 8999999 79999998753 356999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
..-+ .....+.++|||+|+.+.+..... +-+........||..|.+-....+ ..-+.+.|+-|+|.+|.
T Consensus 144 MGlg----rh~~kl~LIDFGLaKky~d~~t~~---HIpyre~r~ltGTaRYASinAh~g----~eqSRRDDmeSvgYvLm 212 (341)
T KOG1163|consen 144 MGLG----RHCNKLYLIDFGLAKKYRDIRTRQ---HIPYREDRNLTGTARYASINAHLG----IEQSRRDDMESVGYVLM 212 (341)
T ss_pred eccc----cccceEEEEeccchhhhccccccc---cCccccCCccceeeeehhhhhhhh----hhhhhhhhhhhhcceee
Confidence 8654 122568999999998876543222 222233445679999998877665 33467899999999999
Q ss_pred HHHhCCCCCCCCCH
Q 001142 1042 ELLTLQVPYMGLSE 1055 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~ 1055 (1142)
.+.-|..||++...
T Consensus 213 YfnrG~LPWQglka 226 (341)
T KOG1163|consen 213 YFNRGSLPWQGLKA 226 (341)
T ss_pred eeecCCCcccccch
Confidence 99999999998654
No 425
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=5.6e-20 Score=212.59 Aligned_cols=172 Identities=20% Similarity=0.174 Sum_probs=121.5
Q ss_pred CCCcceeeeecccCceEEEEEEEC---CccEEEEEEecccCC-CChHHHHHhHHhHHHHHHHHhhCCCCCccc-eeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCG-SSADEIRNFEYSCLGEVRMLGALRHSCIVE-MYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~---~~~vAvKi~~l~~~~-~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVk-l~g~~~ 880 (1142)
...|.+.++||+|+||+||+|.+. +..+|+|+....... ...... ..+.+|+++|++++|+|++. ++++
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~----~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLAR----HLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHH----HHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 356999999999999999999873 455677764311100 011122 23489999999999999985 4332
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC-CCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI-KSEN 959 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDL-Kp~N 959 (1142)
+ ..|+||||++|++|.. +.. .. ...++.|++.||.|||++||+|||| ||+|
T Consensus 91 --~--------------~~~LVmE~~~G~~L~~-~~~--------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~N 142 (365)
T PRK09188 91 --G--------------KDGLVRGWTEGVPLHL-ARP--------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQN 142 (365)
T ss_pred --C--------------CcEEEEEccCCCCHHH-hCc--------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcce
Confidence 1 2399999999999962 211 11 1467899999999999999999999 9999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcc
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA 1020 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 1020 (1142)
||++.+ +.+||+|||+|+.+.......... .........+++.|+|||++..
T Consensus 143 ILv~~~-------~~ikLiDFGlA~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 143 WLMGPD-------GEAAVIDFQLASVFRRRGALYRIA--AYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred EEEcCC-------CCEEEEECccceecccCcchhhhh--hhhhhhhhhccCccCCcccCCh
Confidence 999766 679999999998765432111100 0011125568889999999864
No 426
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.82 E-value=5e-20 Score=228.64 Aligned_cols=239 Identities=23% Similarity=0.184 Sum_probs=164.6
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1142)
+.+..|.+..|+|+.++.. .++|++|+|++|+|+.+ |..+ ++|+.|+|++|.|+.+|..+ ++|+.|
T Consensus 222 ~~L~~L~L~~N~Lt~LP~l----p~~Lk~LdLs~N~LtsL-P~lp------~sL~~L~Ls~N~L~~Lp~lp---~~L~~L 287 (788)
T PRK15387 222 AHITTLVIPDNNLTSLPAL----PPELRTLEVSGNQLTSL-PVLP------PGLLELSIFSNPLTHLPALP---SGLCKL 287 (788)
T ss_pred cCCCEEEccCCcCCCCCCC----CCCCcEEEecCCccCcc-cCcc------cccceeeccCCchhhhhhch---hhcCEE
Confidence 4688899999999998752 58999999999999965 4322 57889999999998888633 467788
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCC
Q 001142 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1142)
+|++|+|+.+|.. +++|+.|+|++|.+..+|..+ .+|+.|++++|.+. .+|.. ..+|+.|+|++|+|
T Consensus 288 ~Ls~N~Lt~LP~~---p~~L~~LdLS~N~L~~Lp~lp---~~L~~L~Ls~N~L~----~LP~l---p~~Lq~LdLS~N~L 354 (788)
T PRK15387 288 WIFGNQLTSLPVL---PPGLQELSVSDNQLASLPALP---SELCKLWAYNNQLT----SLPTL---PSGLQELSVSDNQL 354 (788)
T ss_pred ECcCCcccccccc---ccccceeECCCCccccCCCCc---ccccccccccCccc----ccccc---ccccceEecCCCcc
Confidence 8889988888863 467888888888877776533 34667777775553 23321 13677888888888
Q ss_pred CccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCC
Q 001142 177 RYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1142)
Q Consensus 177 ~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L 256 (1142)
+.+|.. ..+|+.|++++|+|+.||... .+|+.|+|++|+|+.+|... ++|+.|+|++|+|++++. . .
T Consensus 355 s~LP~l---p~~L~~L~Ls~N~L~~LP~l~---~~L~~LdLs~N~Lt~LP~l~---s~L~~LdLS~N~LssIP~-l---~ 421 (788)
T PRK15387 355 ASLPTL---PSELYKLWAYNNRLTSLPALP---SGLKELIVSGNRLTSLPVLP---SELKELMVSGNRLTSLPM-L---P 421 (788)
T ss_pred CCCCCC---CcccceehhhccccccCcccc---cccceEEecCCcccCCCCcc---cCCCEEEccCCcCCCCCc-c---h
Confidence 877753 245667777777777776532 45777777777777776532 457777777777776543 2 2
Q ss_pred CCCCEEEccCCCCCCCCCCCchhhccCCCCCCCCCCCCcccc
Q 001142 257 HNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISS 298 (1142)
Q Consensus 257 ~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~~~~~ 298 (1142)
.+|+.|+|++|+|+. ||..++-......+...+|.+.+.
T Consensus 422 ~~L~~L~Ls~NqLt~---LP~sl~~L~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 422 SGLLSLSVYRNQLTR---LPESLIHLSSETTVNLEGNPLSER 460 (788)
T ss_pred hhhhhhhhccCcccc---cChHHhhccCCCeEECCCCCCCch
Confidence 356667777777764 666555444444444455544433
No 427
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.82 E-value=6.1e-22 Score=238.08 Aligned_cols=244 Identities=25% Similarity=0.276 Sum_probs=171.2
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1142)
++.+..|....|-|..+ ....--.+|+++|+|+|++++.+ +|++.+ .+|+.|...+|+|+.+|..+..+++|+.
T Consensus 218 g~~l~~L~a~~n~l~~~--~~~p~p~nl~~~dis~n~l~~lp-~wi~~~---~nle~l~~n~N~l~~lp~ri~~~~~L~~ 291 (1081)
T KOG0618|consen 218 GPSLTALYADHNPLTTL--DVHPVPLNLQYLDISHNNLSNLP-EWIGAC---ANLEALNANHNRLVALPLRISRITSLVS 291 (1081)
T ss_pred CcchheeeeccCcceee--ccccccccceeeecchhhhhcch-HHHHhc---ccceEecccchhHHhhHHHHhhhhhHHH
Confidence 34555566666666522 22223347778888888887655 777655 7788888888888878877777778888
Q ss_pred EEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccC--------------------------CCCCCEEECCCCCC
Q 001142 96 LKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNK--------------------------LKGLKELELSKVPP 149 (1142)
Q Consensus 96 L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~--------------------------L~~L~~L~Ls~n~~ 149 (1142)
|.+.+|.++.+|+.+..++.|++|+|..|++...|..+-. ++.|+.|++.+|.+
T Consensus 292 l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~L 371 (1081)
T KOG0618|consen 292 LSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHL 371 (1081)
T ss_pred HHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcc
Confidence 8888888888877777788888888887777776653211 12234445555444
Q ss_pred CCCcccchhhhcCCCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCcc
Q 001142 150 RPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSG 228 (1142)
Q Consensus 150 n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~ 228 (1142)
+... ...|.+..+|+.|+|++|+|..+|+. +.+|..|+.|+||+|+|+.||..+.++..|+.|..-+|+|..+| +
T Consensus 372 td~c---~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fP-e 447 (1081)
T KOG0618|consen 372 TDSC---FPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFP-E 447 (1081)
T ss_pred cccc---hhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeech-h
Confidence 3322 22455667788888888888888874 57788888888888888888888888888888888888888888 7
Q ss_pred ccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCC
Q 001142 229 LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKL 269 (1142)
Q Consensus 229 l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L 269 (1142)
+.+++.|+.+|||.|+|+...-..-..-++|++|||+||..
T Consensus 448 ~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 448 LAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred hhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 88888888888888888755432322336888888888874
No 428
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.81 E-value=3.1e-20 Score=226.18 Aligned_cols=258 Identities=19% Similarity=0.190 Sum_probs=182.7
Q ss_pred CcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
+|...+.||.+.|=.|.+|++.+..+.|||+..+..........+ + +.|++ .+.++|||++.+.-....+..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~q---r-L~~ik-~~l~~~pn~lPfqk~~~t~kA--- 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQ---R-LEEIK-FALMKAPNCLPFQKVLVTDKA--- 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHH---H-HHHHH-HHhhcCCcccchHHHHHhhHH---
Confidence 688999999999999999999888899999865543333333332 2 45666 566789999988776554432
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
.|||-+|+. .+|+|.+.. +.-+...+.+.|+.|++.||..+|..||+|||||.+||||+..
T Consensus 96 -----------AylvRqyvk-hnLyDRlST-----RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSW-- 156 (1431)
T KOG1240|consen 96 -----------AYLVRQYVK-HNLYDRLST-----RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSW-- 156 (1431)
T ss_pred -----------HHHHHHHHh-hhhhhhhcc-----chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeee--
Confidence 388889996 899998865 3457888899999999999999999999999999999999987
Q ss_pred cCCCCCeEEEeecCCcccc--cccccccccccCCCCCCCCccCCCcccchhhhcccc------CCCC-CCchhhHHHHHH
Q 001142 968 KADGKPVVKLCDFDRAVPL--RSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH------KPNL-YGLEVDIWSYGC 1038 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l--~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~~~~-~s~ksDVwSLGv 1038 (1142)
..+.|.||..-+.. ...........-+ +...-..|.|||.+.... .... .+++.||||+||
T Consensus 157 -----NW~~LtDFAsFKPtYLPeDNPadf~fFFD-----TSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GC 226 (1431)
T KOG1240|consen 157 -----NWLYLTDFASFKPTYLPEDNPADFTFFFD-----TSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGC 226 (1431)
T ss_pred -----chhhhhcccccCCccCCCCCcccceEEEe-----cCCceeeecChHhhhccccccccCCcccccChhhhhhhhhH
Confidence 67999999987542 1111110000000 111234599999876421 1112 578999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+++||++ |++||. ..+++.. +.+.......-++. -....++.++..|++.||
T Consensus 227 ViaELf~Eg~PlF~---LSQL~aY-r~~~~~~~e~~Le~-----------------------Ied~~~Rnlil~Mi~rdP 279 (1431)
T KOG1240|consen 227 VIAELFLEGRPLFT---LSQLLAY-RSGNADDPEQLLEK-----------------------IEDVSLRNLILSMIQRDP 279 (1431)
T ss_pred HHHHHHhcCCCccc---HHHHHhH-hccCccCHHHHHHh-----------------------CcCccHHHHHHHHHccCc
Confidence 9999998 688885 2333322 22221111111111 112358999999999999
Q ss_pred CCCCCHHHHHHH
Q 001142 1118 TERPTAGDLYEM 1129 (1142)
Q Consensus 1118 ~~RPSa~EVL~~ 1129 (1142)
.+|.+|++.|+.
T Consensus 280 s~RlSAedyL~~ 291 (1431)
T KOG1240|consen 280 SKRLSAEDYLQK 291 (1431)
T ss_pred hhccCHHHHHHh
Confidence 999999999985
No 429
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=2e-19 Score=199.32 Aligned_cols=216 Identities=23% Similarity=0.317 Sum_probs=150.0
Q ss_pred CCCCccceeeeEecCCC-CCCCC------------CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHH
Q 001142 868 RHSCIVEMYGHKISSKW-LPSAD------------GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFI 934 (1142)
Q Consensus 868 ~HpNIVkl~g~~~~~~~-~~~~~------------~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~I 934 (1142)
+|||||+++++|.++-. +|+.- .....+...+|+||.-++ .+|..++.. ...+.....-|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~------~~~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT------RHRSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc------CCCchHHHHHH
Confidence 59999999999876421 11110 012234556899999997 899999875 34677888889
Q ss_pred HHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccc
Q 001142 935 AQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMA 1014 (1142)
Q Consensus 935 a~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 1014 (1142)
+.|+++|+.|||.+||.|||+|++|||+.-+ ++....+.++|||++-.-....-.-... ...-...|...-||
T Consensus 347 laQlLEav~hL~~hgvAhRDlKSDNiL~Eld---dD~~P~LVvaDFGCcLAd~~hGlqlpy~----S~~Vd~GGNa~lmA 419 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKHGVAHRDLKSDNILLELD---DDEIPQLVVADFGCCLADDNHGLQLPYE----SDEVDLGGNAKLMA 419 (598)
T ss_pred HHHHHHHHHHHHHccchhhcccccceEEEec---CCCCcEEEEcccceeeeccccccccccc----cccccCCCcceecc
Confidence 9999999999999999999999999999654 2345788999999985322210000000 01112347778999
Q ss_pred hhhhccccCCCC--CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhcccccccccccCCC
Q 001142 1015 PEVLRAMHKPNL--YGLEVDIWSYGCLLLELLTLQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSG 1091 (1142)
Q Consensus 1015 PE~l~~~~~~~~--~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~ 1091 (1142)
||+.....+... --.|+|.|+.|.+.||+++...||.+.....+. ...++.+.|.++
T Consensus 420 PEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp-------------------- 479 (598)
T KOG4158|consen 420 PEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALP-------------------- 479 (598)
T ss_pred hhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCc--------------------
Confidence 999876432221 236899999999999999999999864333221 112222333222
Q ss_pred CCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1092 FEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1092 ~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
..+++.+++++...|+.||.+|++..
T Consensus 480 -------~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 480 -------SRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred -------ccCChHHHHHHHHHhcCCccccCCcc
Confidence 25667799999999999999999864
No 430
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.78 E-value=6.6e-21 Score=229.30 Aligned_cols=263 Identities=21% Similarity=0.250 Sum_probs=210.4
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1142)
+++.|..+.|+|..+.. ..++|+.|+.++|-|+...+... -.+|+++++++|+++.+|.+++.+.+|+.|+
T Consensus 200 ~l~~l~c~rn~ls~l~~----~g~~l~~L~a~~n~l~~~~~~p~-----p~nl~~~dis~n~l~~lp~wi~~~~nle~l~ 270 (1081)
T KOG0618|consen 200 NLEVLHCERNQLSELEI----SGPSLTALYADHNPLTTLDVHPV-----PLNLQYLDISHNNLSNLPEWIGACANLEALN 270 (1081)
T ss_pred chhhhhhhhcccceEEe----cCcchheeeeccCcceeeccccc-----cccceeeecchhhhhcchHHHHhcccceEec
Confidence 55555555555555543 23578888888888875443311 2579999999999999999999999999999
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccc----hh---------------
Q 001142 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTL----LS--------------- 158 (1142)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~l----p~--------------- 158 (1142)
..+|+|+.+|..+..+++|+.|.+.+|.+..+|.....++.|++|+|..|.+..+.... +.
T Consensus 271 ~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~l 350 (1081)
T KOG0618|consen 271 ANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTL 350 (1081)
T ss_pred ccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccccc
Confidence 99999999999999999999999999999999999999999999999986653221110 00
Q ss_pred -hh--cCCCCCcEEEccCCCCC-ccCcccCCCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCCCCccCccccCCC
Q 001142 159 -EI--AGLKCLTKLSVCHFSIR-YLPPEIGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVELPSGLYLLQ 233 (1142)
Q Consensus 159 -~l--~~L~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~ 233 (1142)
.+ .....|+.|++.+|.|+ ..=+.+-++..|+.|+|++|+|.++|+ .+.+|..|+.|+||+|+|+.||.++.++.
T Consensus 351 p~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~ 430 (1081)
T KOG0618|consen 351 PSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLG 430 (1081)
T ss_pred ccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhh
Confidence 00 11234677888899988 333446788999999999999999995 47889999999999999999999999999
Q ss_pred CCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCC---CC--CchhhccCCCCCCCCC
Q 001142 234 RLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYC---QV--PSWICCNLEGNGKDSS 291 (1142)
Q Consensus 234 ~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~---~i--P~~~~~~l~~n~l~~~ 291 (1142)
.|+.|...+|+|...| .+..+++|+.+|||.|+|+... .. |..-.+++++|..+..
T Consensus 431 ~L~tL~ahsN~l~~fP--e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l~~ 491 (1081)
T KOG0618|consen 431 RLHTLRAHSNQLLSFP--ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRLVF 491 (1081)
T ss_pred hhHHHhhcCCceeech--hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccccc
Confidence 9999999999999887 6899999999999999998732 12 4444578888875443
No 431
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.77 E-value=3.4e-21 Score=192.42 Aligned_cols=190 Identities=22% Similarity=0.315 Sum_probs=170.3
Q ss_pred ccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhc
Q 001142 82 LIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIA 161 (1142)
Q Consensus 82 ~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~ 161 (1142)
++| .+.++.+.+.|.||+|+|+.+|+.+.+|.+|+.|++.+|++..+|..++.|+.|+.|+++-|.+ ..+|..|+
T Consensus 25 ~~~-gLf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl----~~lprgfg 99 (264)
T KOG0617|consen 25 ELP-GLFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRL----NILPRGFG 99 (264)
T ss_pred hcc-cccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhh----hcCccccC
Confidence 444 3667889999999999999999999999999999999999999999999999999999998554 46788999
Q ss_pred CCCCCcEEEccCCCCC--ccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEe
Q 001142 162 GLKCLTKLSVCHFSIR--YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLD 239 (1142)
Q Consensus 162 ~L~~L~~L~Ls~N~L~--~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~ 239 (1142)
.++.|+.|||..|++. .+|..|..|+.|+.|+|++|.+..+|..+++|++|+.|.|..|.|-++|.+++.|++|+.|.
T Consensus 100 s~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelh 179 (264)
T KOG0617|consen 100 SFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELH 179 (264)
T ss_pred CCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHh
Confidence 9999999999999998 68999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcCCcCCCCCcccccCCC---CCCEEEccCCCCCCCCCCCchh
Q 001142 240 LSNNRLTSLGSLDLCLMH---NLQNLNLQYNKLLSYCQVPSWI 279 (1142)
Q Consensus 240 Ls~N~Ls~~~p~~l~~L~---~L~~L~Ls~N~L~~~~~iP~~~ 279 (1142)
+.+|+|+-+|| .++++. +=+.+.+.+|+|.. +|...+
T Consensus 180 iqgnrl~vlpp-el~~l~l~~~k~v~r~E~NPwv~--pIaeQf 219 (264)
T KOG0617|consen 180 IQGNRLTVLPP-ELANLDLVGNKQVMRMEENPWVN--PIAEQF 219 (264)
T ss_pred cccceeeecCh-hhhhhhhhhhHHHHhhhhCCCCC--hHHHHH
Confidence 99999999998 566654 33567788898865 444433
No 432
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.76 E-value=3e-18 Score=182.17 Aligned_cols=145 Identities=14% Similarity=0.090 Sum_probs=107.1
Q ss_pred eeeecccCceEEEEEEE-CCccEEEEEEecccCCCChH--------H----------HHHhHHhHHHHHHHHhhCCCCCc
Q 001142 812 CDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSAD--------E----------IRNFEYSCLGEVRMLGALRHSCI 872 (1142)
Q Consensus 812 ~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~--------~----------~~~~~~~~~~Ei~iL~~L~HpNI 872 (1142)
...||+|++|.||+|.. .+..||+|+.+......... . .+........|++++.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46899999999999987 57889999876443211110 0 00112234569999999988877
Q ss_pred cceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH-HhCCcc
Q 001142 873 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVEL-HSKHIM 951 (1142)
Q Consensus 873 Vkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yL-Hs~gIv 951 (1142)
.....+... ..+|||||++|+++...+.. ...++...+..++.|++.+|.|+ |+.||+
T Consensus 82 ~~p~~~~~~----------------~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H~~gii 140 (190)
T cd05147 82 PCPEPILLK----------------SHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQDCRLV 140 (190)
T ss_pred CCCcEEEec----------------CCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 543332211 12899999998777654322 24688999999999999999999 699999
Q ss_pred ccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 952 HRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 952 HrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
||||||+|||++. +.++|+|||+|..
T Consensus 141 HrDlkP~NIli~~--------~~v~LiDFG~a~~ 166 (190)
T cd05147 141 HADLSEYNLLYHD--------GKLYIIDVSQSVE 166 (190)
T ss_pred cCCCCHHHEEEEC--------CcEEEEEcccccc
Confidence 9999999999973 4699999999864
No 433
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.76 E-value=1.6e-18 Score=193.05 Aligned_cols=255 Identities=20% Similarity=0.225 Sum_probs=155.6
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC----------CCCccce
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR----------HSCIVEM 875 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~----------HpNIVkl 875 (1142)
.+...+.||.|+++.||.+++. ++.+|+|++.... .......+++ .+|.-....+. |-.++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~----~~e~l~~~~~~~~~~p~~a~~~~r~l~P 87 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQL----KEEQLAITLFPGVKNPKEAYRHLRFLVP 87 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHH----HHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHH----HHHHHHhhhhccCCCHHHHHHhceEEee
Confidence 3578899999999999999995 5889999987765 2223344444 44443333332 2233333
Q ss_pred eeeEecCCCCCCCCCCCc---cccceEEEEEeccCCCCHHHHHHHHhccCCC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001142 876 YGHKISSKWLPSADGNPE---HHLLQSAIFMEYVKGGSVKNYIEKLSETGEK--HVSVKLALFIAQDVAAALVELHSKHI 950 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~---~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~--~ls~~~i~~Ia~qIa~gL~yLHs~gI 950 (1142)
++.....+.-+....... ......+++|+-+. ++|.+++.-.+..... .+.......+..|+++.+++||..||
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl 166 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL 166 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce
Confidence 443332211100111111 11224578999885 8999987755444322 23344556677999999999999999
Q ss_pred cccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc----CCCC
Q 001142 951 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH----KPNL 1026 (1142)
Q Consensus 951 vHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~~~~ 1026 (1142)
+|+||||+|++++.+ |.++|+||+........... ...+..|.+||...... ....
T Consensus 167 VHgdi~~~nfll~~~-------G~v~Lg~F~~~~r~g~~~~~-------------~~~~~~~~PPe~~~~~~~~~~~~~~ 226 (288)
T PF14531_consen 167 VHGDIKPENFLLDQD-------GGVFLGDFSSLVRAGTRYRC-------------SEFPVAFTPPELESCAGQFGQNNAP 226 (288)
T ss_dssp EEST-SGGGEEE-TT-------S-EEE--GGGEEETTEEEEG-------------GGS-TTTS-HHHHHHHTSCHHSEEE
T ss_pred EecccceeeEEEcCC-------CCEEEcChHHHeecCceeec-------------cCCCcccCChhhhhhhcccCcccce
Confidence 999999999999998 89999999988654432110 12456799999875421 1235
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001142 1027 YGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1106 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1106 (1142)
++.+.|.|++|+++|.|+.+..||........... . ...+. +.++.++
T Consensus 227 ~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-----------~--------------------f~~C~-~~Pe~v~ 274 (288)
T PF14531_consen 227 YTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-----------D--------------------FSRCR-DMPEPVQ 274 (288)
T ss_dssp E-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-----------G--------------------GTTSS----HHHH
T ss_pred eeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-----------c--------------------chhcC-CcCHHHH
Confidence 78999999999999999999999975422111000 0 11122 5677799
Q ss_pred HHHHHhcccCCCCC
Q 001142 1107 DVFRRCTEENPTER 1120 (1142)
Q Consensus 1107 dLI~~CL~~DP~~R 1120 (1142)
.||..+|+.+|.+|
T Consensus 275 ~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 275 FLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHT-SSGGGS
T ss_pred HHHHHHccCCcccC
Confidence 99999999999988
No 434
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.75 E-value=4.9e-18 Score=183.98 Aligned_cols=184 Identities=13% Similarity=0.126 Sum_probs=131.1
Q ss_pred CCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHh--HHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNF--EYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~--~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.++||.|+||.||++...+..+++|++.-+... .......| ...+.+|+..+.++.||+|..+.+++.....
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~-~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKR-TERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred CceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCc-hHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 46899999999999999998887888999997533221 11111111 0114789999999999999999988765321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ........+|||||++|.+|.++.. +++ ....+++.+|..+|..|++|||+||+||+++.
T Consensus 110 ~------~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 110 K------TLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSK 170 (232)
T ss_pred c------cccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeC
Confidence 1 0011234699999999999987632 232 24568999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ + ++|+|||.......... ...+... ..|+.++|+|+||+++..+.
T Consensus 171 ~-------g-i~liDfg~~~~~~e~~a----------------------~d~~vle----r~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 171 N-------G-LRIIDLSGKRCTAQRKA----------------------KDRIDLE----RHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-------C-EEEEECCCcccccchhh----------------------HHHHHHH----hHhcccccccceeEeehHHH
Confidence 6 6 99999998754322100 0012222 34667999999999987543
No 435
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.74 E-value=4.6e-19 Score=208.25 Aligned_cols=237 Identities=23% Similarity=0.278 Sum_probs=180.3
Q ss_pred eecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCCCC
Q 001142 814 EAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 814 ~LG~GsfG~Vy~a~~-----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~~~~ 887 (1142)
++|+|+||.|++++. .+.-+|.|+.+.......... ....|..++...+ ||.+|++.-.+..+...
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~------~t~~er~il~~~~~~~f~v~lhyafqt~~kl-- 72 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT------HTKQERIILAFVHNTPFLVKLHYAFQTDGKL-- 72 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc------ccccHHHHHhhccCCCceeeeeeeeccccch--
Confidence 479999999998753 455566666332211111111 1146778888887 99999999988876644
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
+++++|..||.|...+.. ...+++.....+...++-+++++|+.+|+|||+|++||+++.+
T Consensus 73 ------------~l~ld~~rgg~lft~l~~-----~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~-- 133 (612)
T KOG0603|consen 73 ------------YLILDFLRGGDLFTRLSK-----EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE-- 133 (612)
T ss_pred ------------hHhhhhcccchhhhcccc-----CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc--
Confidence 999999999999887754 4567888888889999999999999999999999999999988
Q ss_pred cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1047 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~ 1047 (1142)
|++++.|||.++..-... ..+||..|||||++.+ ....+|.||||++.+||+||.
T Consensus 134 -----Ghi~~tdfglske~v~~~--------------~~cgt~eymApEI~~g------h~~a~D~ws~gvl~felltg~ 188 (612)
T KOG0603|consen 134 -----GHIKLTDFGLSKEAVKEK--------------IACGTYEYRAPEIING------HLSAADWWSFGVLAFELLTGT 188 (612)
T ss_pred -----CccccCCchhhhHhHhhh--------------hcccchhhhhhHhhhc------cCCcccchhhhhhHHHHhhCC
Confidence 899999999997654321 1168999999999874 358899999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC-----
Q 001142 1048 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT----- 1122 (1142)
Q Consensus 1048 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS----- 1122 (1142)
.||.. +....|.....+ .+ ......+.+++..++..+|..|--
T Consensus 189 ~pf~~----~~~~~Il~~~~~-~p---------------------------~~l~~~a~~~~~~l~~r~p~nrLg~~~~~ 236 (612)
T KOG0603|consen 189 LPFGG----DTMKRILKAELE-MP---------------------------RELSAEARSLFRQLFKRNPENRLGAGPDG 236 (612)
T ss_pred CCCch----HHHHHHhhhccC-Cc---------------------------hhhhHHHHHHHHHHHhhCHHHHhccCcch
Confidence 99986 344444332211 11 145566888999999999999954
Q ss_pred HHHHHHHHHhhc
Q 001142 1123 AGDLYEMFVART 1134 (1142)
Q Consensus 1123 a~EVL~~L~~~~ 1134 (1142)
+.|+.+|.++..
T Consensus 237 ~~eik~h~f~~~ 248 (612)
T KOG0603|consen 237 VDEIKQHEFFQS 248 (612)
T ss_pred hHHHhccchhee
Confidence 467777776653
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.74 E-value=1.5e-17 Score=176.67 Aligned_cols=146 Identities=14% Similarity=0.133 Sum_probs=108.9
Q ss_pred eeeecccCceEEEEEEEC-CccEEEEEEecccCCCChH------------------HHHHhHHhHHHHHHHHhhCCCCCc
Q 001142 812 CDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSAD------------------EIRNFEYSCLGEVRMLGALRHSCI 872 (1142)
Q Consensus 812 ~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~------------------~~~~~~~~~~~Ei~iL~~L~HpNI 872 (1142)
.+.||+|++|.||+|.+. +..+|+|+.+......... ........+.+|.+.+.++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 578999999999999974 8899999976542211000 001112234689999999999987
Q ss_pred cceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHH-HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCc
Q 001142 873 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNY-IEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHI 950 (1142)
Q Consensus 873 Vkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~-l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gI 950 (1142)
.....+.... .+|||||++|+++... +.. ..++...+..++.|++.++.++|. +||
T Consensus 82 ~~p~~~~~~~----------------~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH~~~gi 139 (190)
T cd05145 82 PVPEPILLKK----------------NVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLYQEAGL 139 (190)
T ss_pred CCceEEEecC----------------CEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 5544443221 2899999998755433 332 357888999999999999999999 999
Q ss_pred cccCCCCCCeeeccccccCCCCCeEEEeecCCccccc
Q 001142 951 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLR 987 (1142)
Q Consensus 951 vHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~ 987 (1142)
+||||||+|||++ + +.++|+|||++....
T Consensus 140 vHrDlkP~NIll~-~-------~~~~liDFG~a~~~~ 168 (190)
T cd05145 140 VHGDLSEYNILYH-D-------GKPYIIDVSQAVELD 168 (190)
T ss_pred ecCCCChhhEEEE-C-------CCEEEEEcccceecC
Confidence 9999999999998 4 679999999997543
No 437
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.73 E-value=7.5e-17 Score=213.42 Aligned_cols=241 Identities=23% Similarity=0.241 Sum_probs=163.3
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecC-CCCccCccccCCcCCcEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKN-VLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N-~Lt~iP~~l~~L~~L~~L 96 (1142)
+|..|.+..|+|..+.. .+..+++|++|||++|+..+.+|. +..+++|+.|+|++| .+..+|..|.+|++|+.|
T Consensus 612 ~L~~L~L~~s~l~~L~~-~~~~l~~Lk~L~Ls~~~~l~~ip~----ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L 686 (1153)
T PLN03210 612 NLVKLQMQGSKLEKLWD-GVHSLTGLRNIDLRGSKNLKEIPD----LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDL 686 (1153)
T ss_pred CCcEEECcCcccccccc-ccccCCCCCEEECCCCCCcCcCCc----cccCCcccEEEecCCCCccccchhhhccCCCCEE
Confidence 55666666666665543 346667777777776654344443 234467777777664 455677777777777777
Q ss_pred EccCC-CCCcCchhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhh---------------
Q 001142 97 KFFGN-EINLFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSE--------------- 159 (1142)
Q Consensus 97 ~Ls~N-~L~~lP~~l~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~--------------- 159 (1142)
+|++| .++.+|..+ ++++|+.|+|++|. +..+|. ...+|+.|+|++|.+. .+|..
T Consensus 687 ~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~---~~~nL~~L~L~~n~i~----~lP~~~~l~~L~~L~l~~~~ 758 (1153)
T PLN03210 687 DMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPD---ISTNISWLDLDETAIE----EFPSNLRLENLDELILCEMK 758 (1153)
T ss_pred eCCCCCCcCccCCcC-CCCCCCEEeCCCCCCcccccc---ccCCcCeeecCCCccc----cccccccccccccccccccc
Confidence 77764 456666655 56667777666654 333332 2345566666654432 22221
Q ss_pred ---------------hcCCCCCcEEEccCCC-CCccCcccCCCCCCCEEEccCC-CCCccchhhcCCCCCCEEEccCC-C
Q 001142 160 ---------------IAGLKCLTKLSVCHFS-IRYLPPEIGCLSNLEQLDLSFN-KMKYLPTEICYLKALISLKVANN-K 221 (1142)
Q Consensus 160 ---------------l~~L~~L~~L~Ls~N~-L~~IP~~l~~L~~L~~L~Ls~N-~L~~lP~~l~~L~~L~~L~Ls~N-~ 221 (1142)
+...++|+.|+|++|. +..+|..+++|++|+.|+|++| ++..+|..+ ++++|+.|+|++| .
T Consensus 759 ~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~ 837 (1153)
T PLN03210 759 SEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSR 837 (1153)
T ss_pred hhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCc
Confidence 1123578888998885 4489999999999999999986 578999877 7899999999997 4
Q ss_pred CCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccC-CCCCCCCCCCchh
Q 001142 222 LVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQY-NKLLSYCQVPSWI 279 (1142)
Q Consensus 222 Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~-N~L~~~~~iP~~~ 279 (1142)
+..+|.. .++|+.|+|++|.|+.+| .++..+++|+.|+|++ |+|.+ +|..+
T Consensus 838 L~~~p~~---~~nL~~L~Ls~n~i~~iP-~si~~l~~L~~L~L~~C~~L~~---l~~~~ 889 (1153)
T PLN03210 838 LRTFPDI---STNISDLNLSRTGIEEVP-WWIEKFSNLSFLDMNGCNNLQR---VSLNI 889 (1153)
T ss_pred ccccccc---ccccCEeECCCCCCccCh-HHHhcCCCCCEEECCCCCCcCc---cCccc
Confidence 5577753 367899999999999765 4889999999999998 66766 55443
No 438
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.72 E-value=1.7e-16 Score=210.07 Aligned_cols=235 Identities=22% Similarity=0.229 Sum_probs=139.3
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecC-CCCccCccccCCcCCcEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKN-VLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N-~Lt~iP~~l~~L~~L~~L 96 (1142)
.+..|.+..+.++.++.. | ...+|+.|+|++|+|... +..+ ..+++|+.|+|++| .++.+|. +..+++|+.|
T Consensus 590 ~Lr~L~~~~~~l~~lP~~-f-~~~~L~~L~L~~s~l~~L-~~~~---~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L 662 (1153)
T PLN03210 590 KLRLLRWDKYPLRCMPSN-F-RPENLVKLQMQGSKLEKL-WDGV---HSLTGLRNIDLRGSKNLKEIPD-LSMATNLETL 662 (1153)
T ss_pred ccEEEEecCCCCCCCCCc-C-CccCCcEEECcCcccccc-cccc---ccCCCCCEEECCCCCCcCcCCc-cccCCcccEE
Confidence 455566666666666543 3 456788888888877643 3323 34577888888765 4667764 6777788888
Q ss_pred EccCCC-CCcCchhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCC
Q 001142 97 KFFGNE-INLFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1142)
Q Consensus 97 ~Ls~N~-L~~lP~~l~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1142)
+|++|. +..+|..+.+|++|+.|++++|. +..+|..+ ++++|+.|++++|. ....+|.. +.+|+.|+|++|
T Consensus 663 ~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~---~L~~~p~~---~~nL~~L~L~~n 735 (1153)
T PLN03210 663 KLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCS---RLKSFPDI---STNISWLDLDET 735 (1153)
T ss_pred EecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCC---Cccccccc---cCCcCeeecCCC
Confidence 887754 56778888888888888887754 66666544 67788888887743 33344432 356778888888
Q ss_pred CCCccCcccCCCC-------------------------------CCCEEEccCCCC-CccchhhcCCCCCCEEEccCC-C
Q 001142 175 SIRYLPPEIGCLS-------------------------------NLEQLDLSFNKM-KYLPTEICYLKALISLKVANN-K 221 (1142)
Q Consensus 175 ~L~~IP~~l~~L~-------------------------------~L~~L~Ls~N~L-~~lP~~l~~L~~L~~L~Ls~N-~ 221 (1142)
.+..+|..+ .++ +|+.|+|++|.. ..+|.+++++++|+.|+|++| .
T Consensus 736 ~i~~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~ 814 (1153)
T PLN03210 736 AIEEFPSNL-RLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCIN 814 (1153)
T ss_pred ccccccccc-cccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCC
Confidence 888777653 233 344444444432 245555555555555555543 3
Q ss_pred CCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 222 LVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 222 Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
|+.||..+ ++++|+.|+|++|..-...|. ...+|+.|+|++|.++.
T Consensus 815 L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~---~~~nL~~L~Ls~n~i~~ 860 (1153)
T PLN03210 815 LETLPTGI-NLESLESLDLSGCSRLRTFPD---ISTNISDLNLSRTGIEE 860 (1153)
T ss_pred cCeeCCCC-CccccCEEECCCCCccccccc---cccccCEeECCCCCCcc
Confidence 44455443 445555555555432222221 12345555555555543
No 439
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=6.4e-17 Score=172.10 Aligned_cols=201 Identities=13% Similarity=0.049 Sum_probs=136.7
Q ss_pred ceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~~~~~ 888 (1142)
.+...|++|+||+||.+...+..++.+-+... ......-+...+.+|+++|++|. |++|++++++.
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~----~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~--------- 71 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAA----PWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD--------- 71 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccc----hhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------
Confidence 56789999999999988876666655443221 11111111223589999999995 68899998862
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC-CCCCeeeccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI-KSENILIDLERK 967 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDL-Kp~NILld~~~~ 967 (1142)
..+++|||+.|.+|...+.. . ...++.|++.+|.++|++||+|||| ||+|||++.+
T Consensus 72 ---------~~~lvmeyI~G~~L~~~~~~-----------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~-- 128 (218)
T PRK12274 72 ---------GRHLDRSYLAGAAMYQRPPR-----------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQED-- 128 (218)
T ss_pred ---------CEEEEEeeecCccHHhhhhh-----------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCC--
Confidence 13899999999898654321 1 1347789999999999999999999 7999999876
Q ss_pred cCCCCCeEEEeecCCcccccccccccc-cccCCC--CCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCC-IAHRGI--PAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~-~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+.++|+|||+|........... ...++. ........++.|+.|+...-.. ..--...+.++-|+-+|.++
T Consensus 129 -----g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~--~~~~~~~~w~~~g~~~~~~~ 201 (218)
T PRK12274 129 -----GSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLK--RTSWIRELWFATGKPVYRFV 201 (218)
T ss_pred -----CCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhc--cchhHHHHHHHhcchHHHHH
Confidence 7799999999975432211000 000000 0011223678899998654311 11226678999999999999
Q ss_pred hCCCCCCCC
Q 001142 1045 TLQVPYMGL 1053 (1142)
Q Consensus 1045 tG~~Pf~~~ 1053 (1142)
|+..|+.+.
T Consensus 202 ~~~~~~~~~ 210 (218)
T PRK12274 202 TRRVLHWED 210 (218)
T ss_pred hccCCcccc
Confidence 999887543
No 440
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.70 E-value=4.1e-19 Score=197.26 Aligned_cols=224 Identities=21% Similarity=0.228 Sum_probs=168.7
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEEEccC-CCCCcCchh-hcCCCCCCE
Q 001142 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNLKFFG-NEINLFPSE-VGNLLGLEC 118 (1142)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L~Ls~-N~L~~lP~~-l~~L~~L~~ 118 (1142)
.-..|+|..|+|+.+++..|+.+ ++|++|||++|+|+.| |.+|.+|.+|..|-+.+ |+|+.||.. |++|..|+.
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l---~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqr 144 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTL---HRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQR 144 (498)
T ss_pred cceEEEeccCCcccCChhhccch---hhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHH
Confidence 55678888999988888777655 8889999999999888 77888888877766665 888888876 677888888
Q ss_pred EEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchh-hhcCCCCCcEEEccCCCCC---c----------cCccc
Q 001142 119 LQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLS-EIAGLKCLTKLSVCHFSIR---Y----------LPPEI 183 (1142)
Q Consensus 119 L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~n~~n~~~~~lp~-~l~~L~~L~~L~Ls~N~L~---~----------IP~~l 183 (1142)
|.+.-|++.-+. ..|..|++|..|.+.+|.+ ..++. .|..+..++.+.+..|.+- . .|..+
T Consensus 145 LllNan~i~Cir~~al~dL~~l~lLslyDn~~----q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~iet 220 (498)
T KOG4237|consen 145 LLLNANHINCIRQDALRDLPSLSLLSLYDNKI----QSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIET 220 (498)
T ss_pred HhcChhhhcchhHHHHHHhhhcchhcccchhh----hhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhc
Confidence 888888865544 6788888888888887444 33343 5677788888888877722 1 12222
Q ss_pred CCCCCCCEEEc--------------------------cCCCCCccc-hhhcCCCCCCEEEccCCCCCcc-CccccCCCCC
Q 001142 184 GCLSNLEQLDL--------------------------SFNKMKYLP-TEICYLKALISLKVANNKLVEL-PSGLYLLQRL 235 (1142)
Q Consensus 184 ~~L~~L~~L~L--------------------------s~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L 235 (1142)
+...-..-..| ..+.....| ..|..|++|+.|+|++|+|+.| +.+|..+..|
T Consensus 221 sgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l 300 (498)
T KOG4237|consen 221 SGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAEL 300 (498)
T ss_pred ccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhh
Confidence 22221111111 122222334 3577899999999999999988 6677789999
Q ss_pred CEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCC
Q 001142 236 ENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSY 272 (1142)
Q Consensus 236 ~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~ 272 (1142)
+.|.|..|+|..+....|.++..|+.|+|.+|+|+++
T Consensus 301 ~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~ 337 (498)
T KOG4237|consen 301 QELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTV 337 (498)
T ss_pred hhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEE
Confidence 9999999999999998999999999999999999984
No 441
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.69 E-value=2.5e-17 Score=201.54 Aligned_cols=163 Identities=28% Similarity=0.314 Sum_probs=124.2
Q ss_pred HHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCccccccccccccccc-----CCCCCCCCccCCCccc
Q 001142 939 AAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH-----RGIPAPDVCVGTPRWM 1013 (1142)
Q Consensus 939 a~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~-----~~~~~~~~~~GT~~Y~ 1013 (1142)
+.+++|||+.||+|||+||+|.+|+.- +++|+.|||+.+.......++.++. .........+||+.|+
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~m-------GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyi 225 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSM-------GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYI 225 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeec-------ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCcccc
Confidence 788999999999999999999999887 8999999999975322211111110 0111234557999999
Q ss_pred chhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCC
Q 001142 1014 APEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE 1093 (1142)
Q Consensus 1014 APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~ 1093 (1142)
|||++.. ..|+..+|+|++|+|+||.+.|+.||.+..+.+++..+.......
T Consensus 226 aPeVilr----qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w------------------------ 277 (1205)
T KOG0606|consen 226 APEVILR----QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW------------------------ 277 (1205)
T ss_pred Chhhhhh----hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc------------------------
Confidence 9999986 579999999999999999999999999999998887664332111
Q ss_pred CchhhhhhHHHHHHHHHHhcccCCCCC---CCHHHHHHHHHhhcCCC
Q 001142 1094 KPEAELETLSFLVDVFRRCTEENPTER---PTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1094 ~~~~~~~~~~~L~dLI~~CL~~DP~~R---PSa~EVL~~L~~~~ss~ 1137 (1142)
++.+...++++++++.++|+.+|..| +.+-+|.+|-+|+.-.+
T Consensus 278 -pE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LDw 323 (1205)
T KOG0606|consen 278 -PEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLDW 323 (1205)
T ss_pred -cccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeeccc
Confidence 11122556779999999999999999 57778888887765443
No 442
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.68 E-value=1.3e-16 Score=188.12 Aligned_cols=215 Identities=25% Similarity=0.339 Sum_probs=159.1
Q ss_pred HhhCCCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHH
Q 001142 864 LGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALV 943 (1142)
Q Consensus 864 L~~L~HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~ 943 (1142)
|+.+.|.|+.+++|.+.+.. ..++|.+||..|+|.+.+.. ....+++.....++++|+.||+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~--------------~~~~i~~~c~rGsl~D~i~~----~~~~~d~~F~~s~~rdi~~Gl~ 62 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP--------------EMIVIWEYCSRGSLLDILSN----EDIKLDYFFILSFIRDISKGLA 62 (484)
T ss_pred CcccchhhhhhheeeEecCC--------------ceEEEEeeecCccHHhHHhc----cccCccHHHHHHHHHHHHHHHH
Confidence 45788999999999998654 45999999999999999975 3456888999999999999999
Q ss_pred HHHhCCc-cccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc
Q 001142 944 ELHSKHI-MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH 1022 (1142)
Q Consensus 944 yLHs~gI-vHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1022 (1142)
|||...| .|+.+++.|.+++.. +.+||.|||+.......... . ......-..-|.|||.+.+..
T Consensus 63 ylh~s~i~~hg~l~s~nClvd~~-------w~lklt~~Gl~~~~~~~~~~---~-----~~~~~~~~~lw~aPellr~~~ 127 (484)
T KOG1023|consen 63 YLHNSPIGYHGALKSSNCLVDSR-------WVLKLTDFGLNSLLEETAEP---E-----AHHPIRKALLWTAPELLRGAL 127 (484)
T ss_pred HHhcCcceeeeeeccccceeeee-------EEEEechhhhcccccccccc---c-----ccchhHHHHhccCHHHhcccc
Confidence 9998766 999999999999988 99999999998765421000 0 001112345699999998743
Q ss_pred CCCC---CCchhhHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHHh-CCCCCchhHHhhhcccccccccccCCCCCC
Q 001142 1023 KPNL---YGLEVDIWSYGCLLLELLTLQVPYMGL----SELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEK 1094 (1142)
Q Consensus 1023 ~~~~---~s~ksDVwSLGviL~ELLtG~~Pf~~~----~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~ 1094 (1142)
.... .+++.||||||++++|+++.+.||... .+.++...+.. +..+..+....
T Consensus 128 ~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~------------------- 188 (484)
T KOG1023|consen 128 SQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIEL------------------- 188 (484)
T ss_pred cccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhh-------------------
Confidence 2222 578899999999999999999999752 23345555544 22222111110
Q ss_pred chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1095 PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1095 ~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
. ....+.+..++.+||..+|.+||++++|-..+...
T Consensus 189 --~-~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 189 --L-NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred --h-hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 0 03334688999999999999999999987655443
No 443
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.68 E-value=4.2e-16 Score=167.42 Aligned_cols=142 Identities=20% Similarity=0.234 Sum_probs=111.5
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 892 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~ 892 (1142)
+.||+|++|.||+|.+.+..+++|+...+..............++.+|+.++..+.|++|+....++.+...
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~-------- 73 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPEN-------- 73 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCC--------
Confidence 679999999999999988999999865332211111111122345789999999999998777666554332
Q ss_pred ccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCC
Q 001142 893 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 972 (1142)
Q Consensus 893 ~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~ 972 (1142)
.++||||++|++|.+++.. ... .+..++.+++.+|.++|+.|++|||++|.|||++ +
T Consensus 74 ------~~lv~e~~~G~~L~~~~~~--------~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~------- 130 (211)
T PRK14879 74 ------FIIVMEYIEGEPLKDLINS--------NGM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-G------- 130 (211)
T ss_pred ------CEEEEEEeCCcCHHHHHHh--------ccH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-C-------
Confidence 3899999999999999865 112 7889999999999999999999999999999998 4
Q ss_pred CeEEEeecCCccc
Q 001142 973 PVVKLCDFDRAVP 985 (1142)
Q Consensus 973 ~~vKL~DFGlA~~ 985 (1142)
+.++|+|||.+..
T Consensus 131 ~~~~liDf~~a~~ 143 (211)
T PRK14879 131 GKIYLIDFGLAEF 143 (211)
T ss_pred CCEEEEECCcccC
Confidence 6799999998853
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.68 E-value=2.9e-16 Score=169.21 Aligned_cols=144 Identities=14% Similarity=0.129 Sum_probs=103.0
Q ss_pred ceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-----CCCCccceeeeEecCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-----RHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-----~HpNIVkl~g~~~~~~~ 884 (1142)
.-.+.||+|+||.||. .-.....++|+...... ...+. +.+|+.+++++ .||||++++|++.++..
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~~----~~~~~----~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g 75 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRGD----GGDKE----IRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG 75 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCeEEEEEecccc----chHHH----HHHHHHHHHHhhccCCCCcccceeeEEEEeCCC
Confidence 4468899999999996 21223346776543211 12223 37999999999 57999999999987531
Q ss_pred CCCCCCCCccccceEEEEEec--cCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHH-HHHHhCCccccCCCCCCee
Q 001142 885 LPSADGNPEHHLLQSAIFMEY--VKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAAL-VELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy--~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL-~yLHs~gIvHrDLKp~NIL 961 (1142)
. .....+|||| +++++|.+++++ ..+++. ..++.|++.++ +|||+++|+||||||+|||
T Consensus 76 ~----------g~v~~~I~e~~G~~~~tL~~~l~~------~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NIL 137 (210)
T PRK10345 76 T----------GYVYDVIADFDGKPSITLTEFAEQ------CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNIL 137 (210)
T ss_pred C----------eEEEEEEecCCCCcchhHHHHHHc------ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEE
Confidence 0 1123489999 667999999965 235555 35678888887 9999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCc
Q 001142 962 IDLERKKADGKPVVKLCDFDRA 983 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA 983 (1142)
++..+ .+...++|+||+.+
T Consensus 138 l~~~~---~~~~~~~LiDg~G~ 156 (210)
T PRK10345 138 CQRIS---ESEVIPVVCDNIGE 156 (210)
T ss_pred EeccC---CCCCcEEEEECCCC
Confidence 97542 12258999995444
No 445
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.65 E-value=1.3e-15 Score=162.12 Aligned_cols=138 Identities=21% Similarity=0.267 Sum_probs=104.7
Q ss_pred eecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCCc
Q 001142 814 EAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNPE 893 (1142)
Q Consensus 814 ~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~~ 893 (1142)
.||+|++|.||+|.+.+..+++|++..+.......+...-..++.+|++++..+.|+++.....++.....
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~--------- 71 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDN--------- 71 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC---------
Confidence 48999999999999999999999864332111111111112345789999999998876544444443322
Q ss_pred cccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCC
Q 001142 894 HHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKP 973 (1142)
Q Consensus 894 ~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~ 973 (1142)
.++||||++|++|.+++... .. .++.|++.+|.+||+.|++|||++|.||+++ + +
T Consensus 72 -----~~lv~e~~~g~~l~~~~~~~-----~~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~-------~ 126 (199)
T TIGR03724 72 -----KTIVMEYIEGKPLKDVIEEG-----ND-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-D-------D 126 (199)
T ss_pred -----CEEEEEEECCccHHHHHhhc-----HH-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-C-------C
Confidence 38999999999999887541 11 7899999999999999999999999999998 4 6
Q ss_pred eEEEeecCCccc
Q 001142 974 VVKLCDFDRAVP 985 (1142)
Q Consensus 974 ~vKL~DFGlA~~ 985 (1142)
.++++|||.+..
T Consensus 127 ~~~liDfg~a~~ 138 (199)
T TIGR03724 127 KLYLIDFGLGKY 138 (199)
T ss_pred cEEEEECCCCcC
Confidence 799999998854
No 446
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65 E-value=6.9e-16 Score=193.09 Aligned_cols=201 Identities=18% Similarity=0.234 Sum_probs=148.4
Q ss_pred CCCcceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC---CCCccceeeeEec
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEMYGHKIS 881 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~---HpNIVkl~g~~~~ 881 (1142)
-..|.|.+.||+|+||.||+|.. ++..+|+|+-+-.. ... | .--.+++.+|+ -+.|..+..++.-
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~--~WE-----f----YI~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN--PWE-----F----YICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC--cee-----e----eehHHHHHhhchhhhcchHHHHHHHcc
Confidence 45689999999999999999987 56778888743211 111 1 11122334444 2344455444332
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+ ..+||+||.+.|+|.+++.. .+.+++..+..+..|++..+++||..+||||||||+|+|
T Consensus 766 ~~--------------~S~lv~ey~~~Gtlld~~N~-----~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfl 826 (974)
T KOG1166|consen 766 QN--------------ASVLVSEYSPYGTLLDLINT-----NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFL 826 (974)
T ss_pred CC--------------cceeeeeccccccHHHhhcc-----CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeE
Confidence 22 23899999999999999973 567999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
|......+.+...++|+|||.+..+.-..... .-...++|-.+-.+|+..+ .+++..+|.|.|..+++
T Consensus 827 l~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~--------~F~~~~~td~f~C~EM~~g----rpWtYq~DyfGlAa~~h 894 (974)
T KOG1166|consen 827 LRREICADSDSKGLYLIDFGRSIDMKLFPDGT--------KFKAVWHTDLFDCIEMREG----RPWTYQIDYFGLAATVH 894 (974)
T ss_pred eecccCCCCcccceEEEecccceeeeEcCCCc--------EEeeeeccccchhHHHhcC----CCCchhhhhHHHHHHHH
Confidence 96654333445679999999997654322110 1123457888999999876 78999999999999999
Q ss_pred HHHhCCC
Q 001142 1042 ELLTLQV 1048 (1142)
Q Consensus 1042 ELLtG~~ 1048 (1142)
-|+.|++
T Consensus 895 ~mLFG~y 901 (974)
T KOG1166|consen 895 VMLFGKY 901 (974)
T ss_pred HHHHHHH
Confidence 9999864
No 447
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.64 E-value=1.4e-15 Score=186.45 Aligned_cols=145 Identities=20% Similarity=0.224 Sum_probs=112.3
Q ss_pred CCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
...|...+.||+|+||+||++.+.+..+++|++..+..............++.+|++++.+++|++++..+.+..+...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~- 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE- 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC-
Confidence 3445778999999999999999988777777654332211111111222455899999999999999887766654332
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.++||||++|++|.+++. ....++.|++.+|.|||+.||+||||||+|||++ +
T Consensus 411 -------------~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~ 463 (535)
T PRK09605 411 -------------KTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-D 463 (535)
T ss_pred -------------CEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-C
Confidence 389999999999998875 2357899999999999999999999999999994 3
Q ss_pred cccCCCCCeEEEeecCCccc
Q 001142 966 RKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~ 985 (1142)
+.++|+|||+++.
T Consensus 464 -------~~~~liDFGla~~ 476 (535)
T PRK09605 464 -------DRLYLIDFGLGKY 476 (535)
T ss_pred -------CcEEEEeCccccc
Confidence 5799999999864
No 448
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.63 E-value=6.6e-17 Score=184.21 Aligned_cols=251 Identities=22% Similarity=0.192 Sum_probs=179.1
Q ss_pred cccCCCCCCcccC-CCCCCCCCCCCEEEccCCCCCCCCcccc-cCCCCCCCccEEEeecCCCCc-------cCccccCCc
Q 001142 21 KLPSEANKINNEK-NGSVNDDDDDSVIDVSGKTVDFPLIESY-GNRGGDNSVEGLYLYKNVLNL-------IPKSVGRYE 91 (1142)
Q Consensus 21 ~L~~~~N~i~~l~-~~~f~~l~~L~~LdLs~N~L~~~~p~~~-~~l~~L~~L~~L~Ls~N~Lt~-------iP~~l~~L~ 91 (1142)
.|.+..++++.-. ...|..+.+|+.|+|+++.++..-...+ ..+...++|++|+++.|.+.. ++..+..++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 4666777776333 3456677789999999999865311111 123344779999999888773 234567788
Q ss_pred CCcEEEccCCCCC-cCchhhcCCCC---CCEEEccCCCCCC-----CcccccCC-CCCCEEECCCCCCCCC-cccchhhh
Q 001142 92 KLRNLKFFGNEIN-LFPSEVGNLLG---LECLQIKISSPGV-----NGFALNKL-KGLKELELSKVPPRPS-VLTLLSEI 160 (1142)
Q Consensus 92 ~L~~L~Ls~N~L~-~lP~~l~~L~~---L~~L~Ls~N~l~~-----~~~~~~~L-~~L~~L~Ls~n~~n~~-~~~lp~~l 160 (1142)
+|+.|+|++|.+. ..+..+..+.+ |+.|++++|.+.. +...+..+ ++|+.|++++|.+... ...++..+
T Consensus 82 ~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~ 161 (319)
T cd00116 82 GLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKAL 161 (319)
T ss_pred ceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHH
Confidence 9999999999997 45555655555 9999999988653 22345566 8899999999776532 12345567
Q ss_pred cCCCCCcEEEccCCCCC-----ccCcccCCCCCCCEEEccCCCCC-----ccchhhcCCCCCCEEEccCCCCCc-cCccc
Q 001142 161 AGLKCLTKLSVCHFSIR-----YLPPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLVE-LPSGL 229 (1142)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~-----~IP~~l~~L~~L~~L~Ls~N~L~-----~lP~~l~~L~~L~~L~Ls~N~Ls~-IP~~l 229 (1142)
..+++|+.|++++|.++ .++..+..+++|+.|+|++|.++ .++..+..+++|+.|+|++|.++. .+..+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 77888999999999987 24455666789999999999987 244566778899999999999873 12222
Q ss_pred c-----CCCCCCEEeCcCCcCCC--C--CcccccCCCCCCEEEccCCCCCC
Q 001142 230 Y-----LLQRLENLDLSNNRLTS--L--GSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 230 ~-----~L~~L~~L~Ls~N~Ls~--~--~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
. ..++|+.|++++|.++. . ....+..+++|+.|++++|+++.
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 2 24789999999999872 1 22345567899999999999875
No 449
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.63 E-value=2e-17 Score=190.78 Aligned_cols=217 Identities=28% Similarity=0.333 Sum_probs=169.5
Q ss_pred EEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCC
Q 001142 45 VIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKIS 124 (1142)
Q Consensus 45 ~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N 124 (1142)
.|.|++-++...+-..+. -.|...+..||+.|++.++|..+..+..|+.|.|++|.|..||..+++|..|++|||+.|
T Consensus 54 ~l~Ls~rrlk~fpr~a~~--~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~N 131 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAAS--YDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSN 131 (722)
T ss_pred ccccccchhhcCCCcccc--ccccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccc
Confidence 456666666654433332 345666777888888888887777777788888888888888888888888877777776
Q ss_pred CCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccch
Q 001142 125 SPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPT 204 (1142)
Q Consensus 125 ~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~ 204 (1142)
++..+| ..++.|+ |+.|-+++|+++.+|+.++.+..|..||.+.|.|.++|.
T Consensus 132 qlS~lp---------------------------~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slps 183 (722)
T KOG0532|consen 132 QLSHLP---------------------------DGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPS 183 (722)
T ss_pred hhhcCC---------------------------hhhhcCc-ceeEEEecCccccCCcccccchhHHHhhhhhhhhhhchH
Confidence 655444 4455555 788899999999999999988899999999999999999
Q ss_pred hhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhccCC
Q 001142 205 EICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLE 284 (1142)
Q Consensus 205 ~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~ 284 (1142)
.+++|.+|+.|.+..|++..+|.++..|+ |..||+|+|+++.+| ..|.+|..|++|-|.+|+|+. -|..+|..=.
T Consensus 184 ql~~l~slr~l~vrRn~l~~lp~El~~Lp-Li~lDfScNkis~iP-v~fr~m~~Lq~l~LenNPLqS---PPAqIC~kGk 258 (722)
T KOG0532|consen 184 QLGYLTSLRDLNVRRNHLEDLPEELCSLP-LIRLDFSCNKISYLP-VDFRKMRHLQVLQLENNPLQS---PPAQICEKGK 258 (722)
T ss_pred HhhhHHHHHHHHHhhhhhhhCCHHHhCCc-eeeeecccCceeecc-hhhhhhhhheeeeeccCCCCC---ChHHHHhccc
Confidence 99999999999999999999999999764 899999999998875 489999999999999999987 7888886544
Q ss_pred CCCCCCCCCCcc
Q 001142 285 GNGKDSSNDDFI 296 (1142)
Q Consensus 285 ~n~l~~~~~~~~ 296 (1142)
...+.++.-..|
T Consensus 259 VHIFKyL~~qA~ 270 (722)
T KOG0532|consen 259 VHIFKYLSTQAC 270 (722)
T ss_pred eeeeeeecchhc
Confidence 444444444444
No 450
>smart00090 RIO RIO-like kinase.
Probab=99.63 E-value=1.4e-15 Score=167.26 Aligned_cols=146 Identities=14% Similarity=0.159 Sum_probs=107.8
Q ss_pred cceeeeecccCceEEEEEE---ECCccEEEEEEecccCCCCh----------------HHHHHhHHhHHHHHHHHhhCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCK---FGSADAAAKVRTLKVCGSSA----------------DEIRNFEYSCLGEVRMLGALRH 869 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~---~~~~~vAvKi~~l~~~~~~~----------------~~~~~~~~~~~~Ei~iL~~L~H 869 (1142)
|++.+.||+|++|.||+|. ..+..+|+|+.+........ ...+.....+.+|+.++.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 6888999999999999998 36789999987644211000 0011122345789999999975
Q ss_pred C--CccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001142 870 S--CIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS 947 (1142)
Q Consensus 870 p--NIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs 947 (1142)
. .+.+++++ . ..++||||++|.+|...... ...+....+..++.||+.++.+||.
T Consensus 110 ~~i~~p~~~~~---~---------------~~~lV~E~~~g~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~ 166 (237)
T smart00090 110 AGVPVPKPIAW---R---------------RNVLVMEFIGGDGLPAPRLK-----DVEPEEEEEFELYDDILEEMRKLYK 166 (237)
T ss_pred cCCCCCeeeEe---c---------------CceEEEEEecCCcccccccc-----cCCcchHHHHHHHHHHHHHHHHHHh
Confidence 3 23344432 1 12899999998888665422 2345666778999999999999999
Q ss_pred CC-ccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 948 KH-IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 948 ~g-IvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
+| |+||||||+||+++ + +.++|+|||.+..
T Consensus 167 ~g~iiH~Dikp~NIli~-~-------~~i~LiDFg~a~~ 197 (237)
T smart00090 167 EGELVHGDLSEYNILVH-D-------GKVVIIDVSQSVE 197 (237)
T ss_pred cCCEEeCCCChhhEEEE-C-------CCEEEEEChhhhc
Confidence 99 99999999999998 4 6799999999854
No 451
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.60 E-value=5.4e-16 Score=179.65 Aligned_cols=187 Identities=22% Similarity=0.283 Sum_probs=137.0
Q ss_pred cceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeE
Q 001142 896 LLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVV 975 (1142)
Q Consensus 896 ~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~v 975 (1142)
..++||.|++|...+|.+++.+. ......++...+.++.|++.|++| ++.+|+|+||.||++..+ ..+
T Consensus 328 ~~~lyI~Mn~c~~~tledWl~rr--~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d-------~q~ 395 (516)
T KOG1033|consen 328 KVYLYIQMNLCEKETLEDWLRRR--RTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDD-------DQL 395 (516)
T ss_pred ccchhhhhhhhhhhhHHHHhhCC--CcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccc-------hhh
Confidence 34579999999999999999752 223457888999999999999999 999999999999999777 679
Q ss_pred EEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCC
Q 001142 976 KLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL-QVPYMGLS 1054 (1142)
Q Consensus 976 KL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG-~~Pf~~~~ 1054 (1142)
||+|||+...........+ ........+||..||+||.+.+ ..|+.|+||||||+||+|++.- ..+|.
T Consensus 396 kIgDFgl~ts~~~~~~~~~----~~a~~t~~~gt~~YmsPEQi~g----~~y~~kvdIyaLGlil~EL~~~f~T~~e--- 464 (516)
T KOG1033|consen 396 KIGDFGLVTSQDKDETVAP----AAASHTQQVGTLLYMSPEQIRG----QQYSEKVDIYALGLILAELLIQFSTQFE--- 464 (516)
T ss_pred hhhhhhheeecccCCcccc----hhhhhhhcccccccCCHHHHhh----hhhhhhcchhhHHHHHHHHHHHhccHHH---
Confidence 9999999976544321000 0112334579999999999987 6899999999999999999973 22221
Q ss_pred HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001142 1055 ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1055 ~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~ 1132 (1142)
.......+..+..|+... .+. +.-..|+.+++.+.|.+||++.+..-|.|.
T Consensus 465 r~~t~~d~r~g~ip~~~~--------------------------~d~-p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 465 RIATLTDIRDGIIPPEFL--------------------------QDY-PEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred HHHhhhhhhcCCCChHHh--------------------------hcC-cHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 111233344443332111 011 224678999999999999988887777664
No 452
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.59 E-value=3.8e-16 Score=177.98 Aligned_cols=223 Identities=23% Similarity=0.233 Sum_probs=172.8
Q ss_pred EEEccCCCCCC-CCcccccCCCCCCCccEEEeecCCCC-----ccCccccCCcCCcEEEccCCCCCc-------Cchhhc
Q 001142 45 VIDVSGKTVDF-PLIESYGNRGGDNSVEGLYLYKNVLN-----LIPKSVGRYEKLRNLKFFGNEINL-------FPSEVG 111 (1142)
Q Consensus 45 ~LdLs~N~L~~-~~p~~~~~l~~L~~L~~L~Ls~N~Lt-----~iP~~l~~L~~L~~L~Ls~N~L~~-------lP~~l~ 111 (1142)
.|+|..+.+++ .....+..+ .+|+.|+|+++.++ .++..+...++|++|++++|.+.. ++..+.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l---~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~ 78 (319)
T cd00116 2 QLSLKGELLKTERATELLPKL---LCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLT 78 (319)
T ss_pred ccccccCcccccchHHHHHHH---hhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHH
Confidence 57899999883 344444444 78999999999995 466677888899999999998873 345677
Q ss_pred CCCCCCEEEccCCCCC-CCcccccCCCC---CCEEECCCCCCCC-CcccchhhhcCC-CCCcEEEccCCCCC-----ccC
Q 001142 112 NLLGLECLQIKISSPG-VNGFALNKLKG---LKELELSKVPPRP-SVLTLLSEIAGL-KCLTKLSVCHFSIR-----YLP 180 (1142)
Q Consensus 112 ~L~~L~~L~Ls~N~l~-~~~~~~~~L~~---L~~L~Ls~n~~n~-~~~~lp~~l~~L-~~L~~L~Ls~N~L~-----~IP 180 (1142)
++++|+.|+|++|.+. ..+..+..+.. |++|++++|.+.. ....+...+..+ ++|+.|++++|.++ .++
T Consensus 79 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~ 158 (319)
T cd00116 79 KGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALA 158 (319)
T ss_pred hcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHH
Confidence 8999999999999865 34445555555 9999999976642 122334556677 89999999999998 345
Q ss_pred cccCCCCCCCEEEccCCCCC-----ccchhhcCCCCCCEEEccCCCCC-----ccCccccCCCCCCEEeCcCCcCCCCCc
Q 001142 181 PEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLV-----ELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 181 ~~l~~L~~L~~L~Ls~N~L~-----~lP~~l~~L~~L~~L~Ls~N~Ls-----~IP~~l~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
..+..+.+|+.|+|++|.|+ .++..+..+++|+.|+|++|.++ .++..+..+++|+.|+|++|.++....
T Consensus 159 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~ 238 (319)
T cd00116 159 KALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGA 238 (319)
T ss_pred HHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHH
Confidence 56677889999999999998 34566777789999999999997 345566778999999999999996433
Q ss_pred ccccC-----CCCCCEEEccCCCCC
Q 001142 251 LDLCL-----MHNLQNLNLQYNKLL 270 (1142)
Q Consensus 251 ~~l~~-----L~~L~~L~Ls~N~L~ 270 (1142)
..+.. .+.|+.|++++|.++
T Consensus 239 ~~l~~~~~~~~~~L~~L~l~~n~i~ 263 (319)
T cd00116 239 AALASALLSPNISLLTLSLSCNDIT 263 (319)
T ss_pred HHHHHHHhccCCCceEEEccCCCCC
Confidence 33332 479999999999997
No 453
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.58 E-value=7.9e-15 Score=156.64 Aligned_cols=143 Identities=17% Similarity=0.163 Sum_probs=105.5
Q ss_pred cceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChH--------------HHHHhHHhHHHHHHHHhhCCCCC--
Q 001142 809 LSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSAD--------------EIRNFEYSCLGEVRMLGALRHSC-- 871 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~--------------~~~~~~~~~~~Ei~iL~~L~HpN-- 871 (1142)
|.+.+.||+|+||.||++.+ .+..+|||+........... ..........+|+.++.++.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 67789999999999999988 57889999866432111000 00011123468999999998774
Q ss_pred ccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001142 872 IVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIM 951 (1142)
Q Consensus 872 IVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIv 951 (1142)
+...++. . ..++||||++|++|...... .....++.+++.++.++|+.||+
T Consensus 97 v~~~~~~----~--------------~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~~gi~ 147 (198)
T cd05144 97 VPKPIDW----N--------------RHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYKHGII 147 (198)
T ss_pred CCceeec----C--------------CceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHHCCCC
Confidence 3443321 1 12899999999998765321 23467889999999999999999
Q ss_pred ccCCCCCCeeeccccccCCCCCeEEEeecCCccccc
Q 001142 952 HRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLR 987 (1142)
Q Consensus 952 HrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~ 987 (1142)
||||||+||+++.+ +.++|+|||.+....
T Consensus 148 H~Dl~p~Nill~~~-------~~~~liDfg~~~~~~ 176 (198)
T cd05144 148 HGDLSEFNILVDDD-------EKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCCcccEEEcCC-------CcEEEEECCccccCC
Confidence 99999999999876 789999999996543
No 454
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.53 E-value=4.4e-16 Score=179.86 Aligned_cols=205 Identities=28% Similarity=0.402 Sum_probs=164.3
Q ss_pred cccccCCCCCCcccCCCCCC-CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001142 19 KEKLPSEANKINNEKNGSVN-DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1142)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~-~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1142)
.+.|.+.+-+++..+.+.+. ++..-...||+.|++..+ |..+..| ..|+.|.|++|.+..||..+.+|..|++||
T Consensus 52 sg~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~el-p~~~~~f---~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ 127 (722)
T KOG0532|consen 52 SGRLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSEL-PEEACAF---VSLESLILYHNCIRTIPEAICNLEALTFLD 127 (722)
T ss_pred hcccccccchhhcCCCccccccccchhhhhccccccccC-chHHHHH---HHHHHHHHHhccceecchhhhhhhHHHHhh
Confidence 45666777777777765544 666777899999999865 4445555 789999999999999999999999999999
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCC
Q 001142 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1142)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1142)
|+.|+++.+|..++.| -|+.|-+++|+++.+| ..++.+..|..|+.+.|.|.
T Consensus 128 ls~NqlS~lp~~lC~l-pLkvli~sNNkl~~lp---------------------------~~ig~~~tl~~ld~s~nei~ 179 (722)
T KOG0532|consen 128 LSSNQLSHLPDGLCDL-PLKVLIVSNNKLTSLP---------------------------EEIGLLPTLAHLDVSKNEIQ 179 (722)
T ss_pred hccchhhcCChhhhcC-cceeEEEecCccccCC---------------------------cccccchhHHHhhhhhhhhh
Confidence 9999999999998876 4777777766655544 45556667778888888888
Q ss_pred ccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCC
Q 001142 178 YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMH 257 (1142)
Q Consensus 178 ~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~ 257 (1142)
.+|..++.+.+|+.|.+..|++..+|.+++.| .|..||+|.|+++.||-.|.+|+.|++|-|.+|.|+..+. .++...
T Consensus 180 slpsql~~l~slr~l~vrRn~l~~lp~El~~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLqSPPA-qIC~kG 257 (722)
T KOG0532|consen 180 SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSL-PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQSPPA-QICEKG 257 (722)
T ss_pred hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCC-ceeeeecccCceeecchhhhhhhhheeeeeccCCCCCChH-HHHhcc
Confidence 88888888888888888888888888888865 4888888888888888888888888888888888886543 555443
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.50 E-value=1.5e-13 Score=151.33 Aligned_cols=146 Identities=15% Similarity=0.185 Sum_probs=105.1
Q ss_pred eeeec-ccCceEEEEEEECCccEEEEEEecccC-----CCChHHHHHhHHhHHHHHHHHhhCCCCCc--cceeeeEecCC
Q 001142 812 CDEAG-KSVSSSLFRCKFGSADAAAKVRTLKVC-----GSSADEIRNFEYSCLGEVRMLGALRHSCI--VEMYGHKISSK 883 (1142)
Q Consensus 812 ~~~LG-~GsfG~Vy~a~~~~~~vAvKi~~l~~~-----~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI--Vkl~g~~~~~~ 883 (1142)
...|| .|+.|+||.+...+..+++|.+..... ............++.+|++++.++.|++| ++.+++.....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 45687 888899999988888999998642110 00000001112345789999999998775 67777644322
Q ss_pred CCCCCCCCCccccceEEEEEeccCC-CCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKG-GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~g-gSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. .....++||||++| .+|.+++.. ..++.. .+.||+.+|.+||++||+||||||.|||+
T Consensus 116 ~----------~~~~~~lV~e~l~G~~~L~~~l~~------~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv 175 (239)
T PRK01723 116 G----------LFYRADILIERIEGARDLVALLQE------APLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILL 175 (239)
T ss_pred C----------cceeeeEEEEecCCCCCHHHHHhc------CCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEE
Confidence 1 12234799999997 699988764 235543 35789999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcc
Q 001142 963 DLERKKADGKPVVKLCDFDRAV 984 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~ 984 (1142)
+.+ +.++|+|||.+.
T Consensus 176 ~~~-------~~v~LIDfg~~~ 190 (239)
T PRK01723 176 DPD-------GKFWLIDFDRGE 190 (239)
T ss_pred cCC-------CCEEEEECCCcc
Confidence 876 679999999874
No 456
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.50 E-value=1.8e-14 Score=170.14 Aligned_cols=194 Identities=34% Similarity=0.428 Sum_probs=105.5
Q ss_pred EEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCc-CCcEEEccCCCCCcCchhhcCCCCCCEEEccC
Q 001142 45 VIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYE-KLRNLKFFGNEINLFPSEVGNLLGLECLQIKI 123 (1142)
Q Consensus 45 ~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~-~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~ 123 (1142)
.|+++.|.+...+.. +..++.++.|++.+|.++.||.....+. +|+.|++++|+|..+|..+.++++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~~----~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNISE----LLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCchh----hhcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCC
Confidence 355555555333322 1222455666666666666655555553 56666666666665555555555555555555
Q ss_pred CCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccc
Q 001142 124 SSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLP 203 (1142)
Q Consensus 124 N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP 203 (1142)
|++..++.... .++.|+.|++++|+++.+|..+..+..|+.|.+++|.+..++
T Consensus 173 N~l~~l~~~~~---------------------------~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~ 225 (394)
T COG4886 173 NDLSDLPKLLS---------------------------NLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELL 225 (394)
T ss_pred chhhhhhhhhh---------------------------hhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecc
Confidence 55554443333 445555555555555555554444444555555555555555
Q ss_pred hhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 204 TEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 204 ~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
..+..+.++..|.+++|++..+|..++.+++|+.|++++|+++.+.+ +..+.+|+.|++++|.+..
T Consensus 226 ~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 226 SSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred hhhhhcccccccccCCceeeeccchhccccccceecccccccccccc--ccccCccCEEeccCccccc
Confidence 55555555555555555555555555555555555555555555544 5555555555555555544
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=1.8e-15 Score=185.95 Aligned_cols=266 Identities=23% Similarity=0.233 Sum_probs=191.8
Q ss_pred CCCcceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~ 883 (1142)
...|.+.+.||+|+|+.|-.+.. .....+++.+.+.......... .++..|..+-+.+. |+|++.+++......
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~----~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~ 94 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSS----EHIDTETDIQKKLSKHSNTVHMIEPSSSPR 94 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchh----hhcCccccccccccccccccccCCccCCCc
Confidence 45688888999999999988765 3444555554444433222222 22356888888886 999999999887655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCCCCeee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH-SKHIMHRDIKSENILI 962 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLH-s~gIvHrDLKp~NILl 962 (1142)
.. +++++|..|+++.+.+.. ......+...+..++.|+..++.|+| ..++.|+||||+|.++
T Consensus 95 ~~--------------~~~~~~s~g~~~f~~i~~---~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l 157 (601)
T KOG0590|consen 95 SY--------------LLSLSYSDGGSLFSKISH---PDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLL 157 (601)
T ss_pred cc--------------ccccCccccccccccccc---CCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchh
Confidence 43 899999999999888731 12225677788899999999999999 9999999999999999
Q ss_pred ccccccCCCCC-eEEEeecCCcccccccccccccccCCCCCCCCccC-CCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 963 DLERKKADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVG-TPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 963 d~~~~~~~~~~-~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+.. + ..++.|||+|..+..... ........+| ++.|+|||...+. ....+..|+||.|+++
T Consensus 158 ~~s-------~~~l~~~df~~At~~~~~~g-------~~~~~~~~~g~s~~y~a~E~~~~~---~~~~~~~d~~S~g~~l 220 (601)
T KOG0590|consen 158 DES-------GSALKIADFGLATAYRNKNG-------AERSLKDRCGSSPPYGAPEHLSGK---AYRGPSVDVWSLGIVL 220 (601)
T ss_pred ccC-------CCcccCCCchhhccccccCC-------cceeeecccCCCCCCCCcccccch---hhcCCCcccccccccc
Confidence 887 5 799999999987654211 1112234457 9999999998762 3446889999999999
Q ss_pred HHHHhCCCCCCCCCHHHHH--HHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1041 LELLTLQVPYMGLSELEIH--DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~--~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
.-+++|..||......... ..+...... ....+ ........+++.+++..+|.
T Consensus 221 ~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~------~~~~~~~~~~l~k~l~~~~~ 275 (601)
T KOG0590|consen 221 SAMLTGELPWDFPSRKDGRYSSWKSNKGRF-------------------TQLPW------NSISDQAHDLLHKILKENPS 275 (601)
T ss_pred cccccCCCCccccccccccceeeccccccc-------------------ccCcc------ccCChhhhhcccccccCCch
Confidence 9999999999754332210 000000000 00000 13445578889999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001142 1119 ERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ 1134 (1142)
.|.+.+++..+.|...
T Consensus 276 ~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 276 NRLSIEELKLDNWLSS 291 (601)
T ss_pred hccccccccccccccc
Confidence 9999999999999876
No 458
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.46 E-value=3.5e-13 Score=141.98 Aligned_cols=140 Identities=16% Similarity=0.233 Sum_probs=94.5
Q ss_pred eeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHh------------------HHhHHHHHHHHhhCCCCC-
Q 001142 812 CDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNF------------------EYSCLGEVRMLGALRHSC- 871 (1142)
Q Consensus 812 ~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~------------------~~~~~~Ei~iL~~L~HpN- 871 (1142)
.+.||+|+||+||+|... +..+|+|+.+....... ....+ ......|...+.++.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~ 79 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFK--KRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGV 79 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchh--hhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCC
Confidence 578999999999999985 78899998654322111 11110 011134566666664332
Q ss_pred -ccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHH-HHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 001142 872 -IVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKN-YIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-K 948 (1142)
Q Consensus 872 -IVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~-~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~ 948 (1142)
+.+.+++. ..++||||++++++.. .+... ... ..+..++.+++.++.++|. +
T Consensus 80 ~~~~~~~~~------------------~~~lv~e~~~g~~~~~~~l~~~------~~~-~~~~~~~~~~~~~l~~lh~~~ 134 (187)
T cd05119 80 PVPKPIDLN------------------RHVLVMEFIGGDGIPAPRLKDV------RLL-EDPEELYDQILELMRKLYREA 134 (187)
T ss_pred CCCceEecC------------------CCEEEEEEeCCCCccChhhhhh------hhc-ccHHHHHHHHHHHHHHHhhcc
Confidence 33333321 2389999999854321 12210 011 6678899999999999999 9
Q ss_pred CccccCCCCCCeeeccccccCCCCCeEEEeecCCcccc
Q 001142 949 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPL 986 (1142)
Q Consensus 949 gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l 986 (1142)
||+||||||+||+++ + +.++|+|||.+...
T Consensus 135 ~ivH~Dl~p~Nili~-~-------~~~~liDfg~a~~~ 164 (187)
T cd05119 135 GLVHGDLSEYNILVD-D-------GKVYIIDVPQAVEI 164 (187)
T ss_pred CcCcCCCChhhEEEE-C-------CcEEEEECcccccc
Confidence 999999999999998 5 68999999998643
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.45 E-value=7.6e-14 Score=164.74 Aligned_cols=191 Identities=34% Similarity=0.376 Sum_probs=142.2
Q ss_pred EEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCC-CCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC
Q 001142 95 NLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLK-GLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1142)
Q Consensus 95 ~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~-~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1142)
.|+++.|.+..-+..+..++.++.|++.+|.+..++.....+. +|+.|++++|.+ ..+|..+..+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i----~~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKI----ESLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCchhhhcccceeEEecCCcccccCccccccchhhcccccccccch----hhhhhhhhccccccccccCC
Confidence 4555555553333334444555555555555555555555553 666666665332 34445678899999999999
Q ss_pred CCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccc
Q 001142 174 FSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDL 253 (1142)
Q Consensus 174 N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l 253 (1142)
|+++.+|...+.+++|+.|++++|+++.+|..+..+..|+.|.+++|.+..+|..+.++.++..|.+++|++...+ ..+
T Consensus 173 N~l~~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~-~~~ 251 (394)
T COG4886 173 NDLSDLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLP-ESI 251 (394)
T ss_pred chhhhhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeecc-chh
Confidence 9999999987799999999999999999999887788899999999988888889999999999999999998763 478
Q ss_pred cCCCCCCEEEccCCCCCCCC---CCCchhhccCCCCCCCC
Q 001142 254 CLMHNLQNLNLQYNKLLSYC---QVPSWICCNLEGNGKDS 290 (1142)
Q Consensus 254 ~~L~~L~~L~Ls~N~L~~~~---~iP~~~~~~l~~n~l~~ 290 (1142)
..++.|+.|++++|.++.+. .+..+..+.++.|.+..
T Consensus 252 ~~l~~l~~L~~s~n~i~~i~~~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 252 GNLSNLETLDLSNNQISSISSLGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred ccccccceeccccccccccccccccCccCEEeccCccccc
Confidence 89999999999999998732 22333345555555543
No 460
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.41 E-value=9.4e-13 Score=131.41 Aligned_cols=132 Identities=20% Similarity=0.228 Sum_probs=104.2
Q ss_pred eeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC--CCccceeeeEecCCCCCCC
Q 001142 811 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--SCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 811 l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H--pNIVkl~g~~~~~~~~~~~ 888 (1142)
+.+.||+|.++.||++...+..+++|+..... . ...+ .+|+.++..++| .++++++++....+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~--~----~~~~----~~e~~~~~~l~~~~~~~p~~~~~~~~~~----- 66 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSRE--K----GADR----EREVAILQLLARKGLPVPKVLASGESDG----- 66 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCC--c----hhHH----HHHHHHHHHHHHcCCCCCeEEEEcCCCC-----
Confidence 45789999999999999988888888753221 1 2233 689999999975 58888887765432
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCCCCeeeccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---HIMHRDIKSENILIDLE 965 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~---gIvHrDLKp~NILld~~ 965 (1142)
..+++|||++++.+..+ +......++.+++.++.++|.. +++|+|++|.||+++..
T Consensus 67 ---------~~~~v~e~~~g~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~ 125 (155)
T cd05120 67 ---------WSYLLMEWIEGETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG 125 (155)
T ss_pred ---------ccEEEEEecCCeecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC
Confidence 34999999997766533 4456677899999999999984 79999999999999875
Q ss_pred cccCCCCCeEEEeecCCccc
Q 001142 966 RKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~ 985 (1142)
+.++++|||.+..
T Consensus 126 -------~~~~l~Df~~~~~ 138 (155)
T cd05120 126 -------KILGIIDWEYAGY 138 (155)
T ss_pred -------cEEEEEecccccC
Confidence 6899999998853
No 461
>PLN03150 hypothetical protein; Provisional
Probab=99.33 E-value=2.8e-12 Score=159.77 Aligned_cols=90 Identities=29% Similarity=0.442 Sum_probs=63.0
Q ss_pred CCEEEccCCCCC-ccchhhcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccC
Q 001142 189 LEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQY 266 (1142)
Q Consensus 189 L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~ 266 (1142)
++.|+|++|.|+ .+|..++.+++|+.|+|++|.|+ .+|..++.+++|+.|+|++|+|+|.+|..+++|++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 566777777776 66777777777777777777776 6676777777777777777777777776677777777777777
Q ss_pred CCCCCCCCCCchhh
Q 001142 267 NKLLSYCQVPSWIC 280 (1142)
Q Consensus 267 N~L~~~~~iP~~~~ 280 (1142)
|+|++ .+|..+.
T Consensus 500 N~l~g--~iP~~l~ 511 (623)
T PLN03150 500 NSLSG--RVPAALG 511 (623)
T ss_pred Ccccc--cCChHHh
Confidence 77766 5665554
No 462
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.17 E-value=3.6e-11 Score=131.99 Aligned_cols=214 Identities=21% Similarity=0.232 Sum_probs=144.8
Q ss_pred HHHhhCCCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHH
Q 001142 862 RMLGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAA 941 (1142)
Q Consensus 862 ~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~g 941 (1142)
.-+.++-|.|||+++.|+.+..+- ..+...++.||+..|++..++++..... ..+......+|+-||+.|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~---------e~~rviFiteymssgs~~~fLkrt~~~~-~a~~~~~wkkw~tqIlsa 188 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYE---------EKPRVIFITEYMSSGSLKQFLKRTKKNQ-KALFQKAWKKWCTQILSA 188 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccc---------cccceEEEEecccchhHHHHHHHHHHhh-hhhhHHHHHHHHHHHHhh
Confidence 345566799999999999875532 3456789999999999999999876654 578888999999999999
Q ss_pred HHHHHhC--CccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhc
Q 001142 942 LVELHSK--HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR 1019 (1142)
Q Consensus 942 L~yLHs~--gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 1019 (1142)
|.|||+. .|+|+++...-|++..+ +-+|++- +.-............ .......+-++|.|||.-.
T Consensus 189 l~yLhs~~PpiihgnlTc~tifiq~n-------gLIkig~-~ap~s~h~s~~~~~~-----~Ek~~~~~~~g~~a~~sg~ 255 (458)
T KOG1266|consen 189 LSYLHSCDPPIIHGNLTCDTIFIQHN-------GLIKIGS-VAPDSTHPSVNSTRE-----AEKSVNTSLPGFSAPESGT 255 (458)
T ss_pred hhhhhccCCccccCCcchhheeecCC-------ceEEecc-cCccccchhhhhhhH-----hhhhccccCCccccCCcCc
Confidence 9999975 69999999999999876 5566542 211111110011000 0111224677899999743
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhh
Q 001142 1020 AMHKPNLYGLEVDIWSYGCLLLELLTLQVP-YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1098 (1142)
Q Consensus 1020 ~~~~~~~~s~ksDVwSLGviL~ELLtG~~P-f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1142)
. ...+.++|||+||....||..+..- -.+.+..+....+...... .
T Consensus 256 ~----tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~-----------------------l------ 302 (458)
T KOG1266|consen 256 T----TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG-----------------------L------ 302 (458)
T ss_pred c----cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee-----------------------c------
Confidence 2 3456789999999999999887543 2222222222222111100 0
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1099 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1099 ~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
..+.-++++..|++..|..||+|.+++.|+...
T Consensus 303 --en~lqr~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 303 --ENGLQRGSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred --cCccccCcCcccccCCCCCCcchhhhhcCceee
Confidence 000124568899999999999999999997654
No 463
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.16 E-value=2.6e-10 Score=121.42 Aligned_cols=143 Identities=14% Similarity=0.108 Sum_probs=102.3
Q ss_pred eeeecccCceEEEEEEEC--------CccEEEEEEecccCCCC------------------hHHHHHhHHhHHHHHHHHh
Q 001142 812 CDEAGKSVSSSLFRCKFG--------SADAAAKVRTLKVCGSS------------------ADEIRNFEYSCLGEVRMLG 865 (1142)
Q Consensus 812 ~~~LG~GsfG~Vy~a~~~--------~~~vAvKi~~l~~~~~~------------------~~~~~~~~~~~~~Ei~iL~ 865 (1142)
...||.|--+.||.|... +..+|+|+++....... ....+.+..+..+|++.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 357899999999999754 36899999764322111 0112233445569999999
Q ss_pred hCC--CCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHH-HHHHHhccCCCCCCHHHHHHHHHHHHHHH
Q 001142 866 ALR--HSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKN-YIEKLSETGEKHVSVKLALFIAQDVAAAL 942 (1142)
Q Consensus 866 ~L~--HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~-~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL 942 (1142)
++. .-++.+.+++. . -+|||||+.+..+.. .+++ ..++......+..+++.+|
T Consensus 82 rl~~~Gv~vP~pi~~~--~----------------~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l 137 (197)
T cd05146 82 RMQKAGIPCPEVVVLK--K----------------HVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMM 137 (197)
T ss_pred HHHHcCCCCCeEEEec--C----------------CEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHH
Confidence 995 35666777642 1 189999997654422 2222 2355566778889999999
Q ss_pred HHH-HhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccc
Q 001142 943 VEL-HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPL 986 (1142)
Q Consensus 943 ~yL-Hs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l 986 (1142)
..| |..|||||||++.|||++. +.++|+|||.+...
T Consensus 138 ~~l~H~~glVHGDLs~~NIL~~~--------~~v~iIDF~qav~~ 174 (197)
T cd05146 138 KQLYKECNLVHADLSEYNMLWHD--------GKVWFIDVSQSVEP 174 (197)
T ss_pred HHHHHhCCeecCCCCHHHEEEEC--------CcEEEEECCCceeC
Confidence 999 8999999999999999964 46999999988654
No 464
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.15 E-value=3e-12 Score=152.42 Aligned_cols=218 Identities=27% Similarity=0.248 Sum_probs=99.8
Q ss_pred CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCE
Q 001142 39 DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLEC 118 (1142)
Q Consensus 39 ~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~ 118 (1142)
.+..++.++|..|.|.... ..+..+.+|+.|+|.+|.|..|...+..+++|++|+|++|+|+.+. .+..++.|+.
T Consensus 70 ~l~~l~~l~l~~n~i~~~~----~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~-~l~~l~~L~~ 144 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIAKIL----NHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLE-GLSTLTLLKE 144 (414)
T ss_pred HhHhHHhhccchhhhhhhh----cccccccceeeeeccccchhhcccchhhhhcchheecccccccccc-chhhccchhh
Confidence 4445555556666555411 1133345666666666666666444555666666666666666553 2444555666
Q ss_pred EEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCC
Q 001142 119 LQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNK 198 (1142)
Q Consensus 119 L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~ 198 (1142)
|++.+|.+..+.. +..+..|+.|++++|.+...... . +..+.+|+.+.+.+|.+..+ ..+..+..+..+++..|.
T Consensus 145 L~l~~N~i~~~~~-~~~l~~L~~l~l~~n~i~~ie~~--~-~~~~~~l~~l~l~~n~i~~i-~~~~~~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 145 LNLSGNLISDISG-LESLKSLKLLDLSYNRIVDIEND--E-LSELISLEELDLGGNSIREI-EGLDLLKKLVLLSLLDNK 219 (414)
T ss_pred heeccCcchhccC-CccchhhhcccCCcchhhhhhhh--h-hhhccchHHHhccCCchhcc-cchHHHHHHHHhhccccc
Confidence 6666665444332 22244444455544333211110 0 23344444445555544433 222223333333444444
Q ss_pred CCccchhhcCCCC--CCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCC
Q 001142 199 MKYLPTEICYLKA--LISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKL 269 (1142)
Q Consensus 199 L~~lP~~l~~L~~--L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L 269 (1142)
++.+- .+..+.. |+.|++++|.+..+|..+..+.++..|++++|++...-. +.....+..+.+..|++
T Consensus 220 i~~~~-~l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~~~~~--~~~~~~~~~~~~~~~~~ 289 (414)
T KOG0531|consen 220 ISKLE-GLNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRISNLEG--LERLPKLSELWLNDNKL 289 (414)
T ss_pred ceecc-CcccchhHHHHHHhcccCccccccccccccccccccchhhcccccccc--ccccchHHHhccCcchh
Confidence 44331 1111122 445555555555444444444445555555555443322 33334444444444444
No 465
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.14 E-value=7e-11 Score=140.02 Aligned_cols=257 Identities=22% Similarity=0.194 Sum_probs=176.3
Q ss_pred cceeeeecc--cCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEec
Q 001142 809 LSSCDEAGK--SVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKIS 881 (1142)
Q Consensus 809 y~l~~~LG~--GsfG~Vy~a~~----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~ 881 (1142)
+.+.+.+|. |.+|.||.+.. ....+|+|.-+.... ........ .+|+....+++ |+|.|+.+..+..
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s-~p~~~~~k-----~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS-PPLDSKRK-----LREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCC-Cccccccc-----cchhhcccccCccccccccCccccc
Confidence 467788999 99999999876 344556654222211 11122222 47877777885 9999998888877
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHH----HHHHHHhCCccccCCCC
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAA----ALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~----gL~yLHs~gIvHrDLKp 957 (1142)
.+.. ++-+|++. .+|.++.+. ....++...++.++.+... ||.++|..+|+|-|+||
T Consensus 190 ~~~l--------------fiqtE~~~-~sl~~~~~~----~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp 250 (524)
T KOG0601|consen 190 SGIL--------------FIQTELCG-ESLQSYCHT----PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKP 250 (524)
T ss_pred CCcc--------------eeeecccc-chhHHhhhc----ccccCCchhhhhHHhhhhhcccccccccCCCcccccccch
Confidence 6644 88999995 788887765 2334778888888888888 99999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
.||+...+. ...+++|||....+....-..... ......|...|++||...+ .++.+.|||++|
T Consensus 251 ~~i~~~~~~------~s~~~~df~~v~~i~~~~~~~~~~-----~~~r~~~~~~Y~~ke~~~~-----l~~~~~di~sl~ 314 (524)
T KOG0601|consen 251 ANIFTTSDW------TSCKLTDFGLVSKISDGNFSSVFK-----VSKRPEGDCIYAAKELLNG-----LATFASDIFSLG 314 (524)
T ss_pred hheeccccc------ceeecCCcceeEEccCCcccccee-----eeecCCCCceEeChhhhcc-----ccchHhhhcchh
Confidence 999997662 568999999988765533111100 0111246778999999875 678999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1038 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
.++.+..++..++...-. .....+..+. ++ .+.-...+.++...+..|++.+|
T Consensus 315 ev~l~~~l~~~~~~~g~~-~~W~~~r~~~---ip-----------------------~e~~~~~s~~l~~~~~~~~d~~~ 367 (524)
T KOG0601|consen 315 EVILEAILGSHLPSVGKN-SSWSQLRQGY---IP-----------------------LEFCEGGSSSLRSVTSQMLDEDP 367 (524)
T ss_pred hhhHhhHhhcccccCCCC-CCcccccccc---Cc-----------------------hhhhcCcchhhhhHHHHhcCcch
Confidence 999999888665542100 0011111111 11 01101223445568899999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001142 1118 TERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~ 1133 (1142)
..|++++.+.++....
T Consensus 368 ~~~~~~q~~~~l~~i~ 383 (524)
T KOG0601|consen 368 RLRLTAQILTALNVIH 383 (524)
T ss_pred hhhhHHHHHhcccccc
Confidence 9999999998876554
No 466
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.12 E-value=3.6e-11 Score=125.60 Aligned_cols=129 Identities=20% Similarity=0.177 Sum_probs=38.7
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhc-CCCC
Q 001142 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVG-NLLG 115 (1142)
Q Consensus 37 f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~-~L~~ 115 (1142)
+.+...++.|+|++|+|+.+- .++. .+.+|+.|+|++|.|+.|+ .+..|++|++|+|++|.|+.+++.+. .+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~Ie--~L~~--~l~~L~~L~Ls~N~I~~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTIE--NLGA--TLDKLEVLDLSNNQITKLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--T--T-TT--EEE-TTS--S--T-T----TT--EEE--SS---S-CHHHHHH-TT
T ss_pred ccccccccccccccccccccc--chhh--hhcCCCEEECCCCCCcccc-CccChhhhhhcccCCCCCCccccchHHhCCc
Confidence 445556777777777776532 1221 3467777777777777774 46667777777777777777765553 5777
Q ss_pred CCEEEccCCCCCCCcc--cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEE
Q 001142 116 LECLQIKISSPGVNGF--ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLS 170 (1142)
Q Consensus 116 L~~L~Ls~N~l~~~~~--~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~ 170 (1142)
|+.|+|++|++..+.. .+..+++|+.|+|.+|++.....--...+..+++|+.||
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD 146 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLD 146 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEET
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeC
Confidence 7777777777554442 244455555555555444322221222234444554444
No 467
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.12 E-value=8.6e-12 Score=148.51 Aligned_cols=238 Identities=23% Similarity=0.203 Sum_probs=183.2
Q ss_pred ccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEcc
Q 001142 20 EKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFF 99 (1142)
Q Consensus 20 ~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls 99 (1142)
+.+.+..|.|..+ ...+..+.+|..|+|..|+|..+... +..+.+|++|+|++|.|+.|. .+..++.|+.|+++
T Consensus 75 ~~l~l~~n~i~~~-~~~l~~~~~l~~l~l~~n~i~~i~~~----l~~~~~L~~L~ls~N~I~~i~-~l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 75 KELNLRQNLIAKI-LNHLSKLKSLEALDLYDNKIEKIENL----LSSLVNLQVLDLSFNKITKLE-GLSTLTLLKELNLS 148 (414)
T ss_pred Hhhccchhhhhhh-hcccccccceeeeeccccchhhcccc----hhhhhcchheecccccccccc-chhhccchhhheec
Confidence 3444555666652 34578889999999999999875531 345599999999999999984 46777789999999
Q ss_pred CCCCCcCchhhcCCCCCCEEEccCCCCCCCccc-ccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc
Q 001142 100 GNEINLFPSEVGNLLGLECLQIKISSPGVNGFA-LNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1142)
Q Consensus 100 ~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~-~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1142)
+|.|+.++. +..++.|+.+++++|.+..+... ...+.+|+.|++.+|.+.... .+..+..+..+++..|.++.
T Consensus 149 ~N~i~~~~~-~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~-----~~~~~~~l~~~~l~~n~i~~ 222 (414)
T KOG0531|consen 149 GNLISDISG-LESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREIE-----GLDLLKKLVLLSLLDNKISK 222 (414)
T ss_pred cCcchhccC-CccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhccc-----chHHHHHHHHhhccccccee
Confidence 999998864 66699999999999998777654 588899999999986653322 33444556666899999986
Q ss_pred cCcccCCCCC--CCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCC---Cccc-
Q 001142 179 LPPEIGCLSN--LEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSL---GSLD- 252 (1142)
Q Consensus 179 IP~~l~~L~~--L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~---~p~~- 252 (1142)
+- .+..+.. |+.|++++|.+..++..+..+.++..|++++|+++.+. .+.....+..+.++.|.+... ....
T Consensus 223 ~~-~l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (414)
T KOG0531|consen 223 LE-GLNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRISNLE-GLERLPKLSELWLNDNKLALSEAISQEYI 300 (414)
T ss_pred cc-CcccchhHHHHHHhcccCccccccccccccccccccchhhccccccc-cccccchHHHhccCcchhcchhhhhcccc
Confidence 62 2333444 89999999999998888889999999999999998663 344566778888888887632 2222
Q ss_pred ccCCCCCCEEEccCCCCCC
Q 001142 253 LCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~ 271 (1142)
....+.+..+.+.+|++..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 301 TSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred ccccccccccccccCcccc
Confidence 5677899999999999876
No 468
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=1.8e-11 Score=138.89 Aligned_cols=203 Identities=19% Similarity=0.146 Sum_probs=114.5
Q ss_pred CCCccEEEeecCCCCccCc--cccCCcCCcEEEccCCCCCcCc---hhhcCCCCCCEEEccCCCCCCCc--ccccCCCCC
Q 001142 67 DNSVEGLYLYKNVLNLIPK--SVGRYEKLRNLKFFGNEINLFP---SEVGNLLGLECLQIKISSPGVNG--FALNKLKGL 139 (1142)
Q Consensus 67 L~~L~~L~Ls~N~Lt~iP~--~l~~L~~L~~L~Ls~N~L~~lP---~~l~~L~~L~~L~Ls~N~l~~~~--~~~~~L~~L 139 (1142)
+.+|+...|.+....-++. ....|++++.||||.|-|..+- .-...|++|+.|+|+.|.+...- ..-..+..|
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~l 199 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHL 199 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhh
Confidence 3555555555555544432 3445555666666666555321 12334566666666655532211 122245566
Q ss_pred CEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCcc-CcccCCCCCCCEEEccCCCCCccc--hhhcCCCCCCEEE
Q 001142 140 KELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYLP--TEICYLKALISLK 216 (1142)
Q Consensus 140 ~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~lP--~~l~~L~~L~~L~ 216 (1142)
+.|.|+.+.++ ...+-..+..+++|+.|+|..|..-.+ -.....+..|+.|||++|++-.++ ..++.++.|..|+
T Consensus 200 K~L~l~~CGls--~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 200 KQLVLNSCGLS--WKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred heEEeccCCCC--HHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 66666665443 122222344567777777777742211 122344566777777777777666 5567777777777
Q ss_pred ccCCCCC--ccCcc-----ccCCCCCCEEeCcCCcCCCCCc-ccccCCCCCCEEEccCCCCCC
Q 001142 217 VANNKLV--ELPSG-----LYLLQRLENLDLSNNRLTSLGS-LDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 217 Ls~N~Ls--~IP~~-----l~~L~~L~~L~Ls~N~Ls~~~p-~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
++.+.+. .+|+. ...+++|++|+++.|++..... ..+..+++|+.|.+..|+|+.
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 7777776 34554 3446777777777777754322 124455666777777777764
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.11 E-value=1.8e-11 Score=132.46 Aligned_cols=131 Identities=31% Similarity=0.299 Sum_probs=81.5
Q ss_pred CCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCE
Q 001142 135 KLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALIS 214 (1142)
Q Consensus 135 ~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~ 214 (1142)
.+.-|++||||+|.+ ..+-+++.-++.++.|++++|.|..+-. +..|++|+.||||+|.|+.+-.+-..|.+++.
T Consensus 282 TWq~LtelDLS~N~I----~~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 282 TWQELTELDLSGNLI----TQIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLAECVGWHLKLGNIKT 356 (490)
T ss_pred hHhhhhhccccccch----hhhhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhHhhhhhHhhhcCEee
Confidence 344566666666433 2333344445666677777777665533 66666777777777777766555555666677
Q ss_pred EEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcc-cccCCCCCCEEEccCCCCCC
Q 001142 215 LKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSL-DLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 215 L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~-~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
|.|++|.|..+ +++..|-+|..||+++|+|...... .+++|+-|+.|.|.+|+|..
T Consensus 357 L~La~N~iE~L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 357 LKLAQNKIETL-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred eehhhhhHhhh-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 77777776665 3566666677777777776644321 36667777777777777765
No 470
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.10 E-value=2e-11 Score=150.53 Aligned_cols=274 Identities=21% Similarity=0.230 Sum_probs=183.0
Q ss_pred CCCCCcceeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
.+++.+.+.+-+-.|+++.++.+.-.+ ...+.|+..+.... ...+.+.. ..+-.++...+||-++...--+..
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i-~~~~~~s~----r~~s~~~i~p~~P~v~~~~~s~~~ 875 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKI-RTNDYESI----RSKSNILITPRSPAVVRSFPSFPC 875 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhh-cccccccc----CCccCccccCCCCceecccCCCCC
Confidence 467788999999999999999876432 22333332211100 00111111 233333334455666654433222
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. -.+|||+|+.+++|...++.. ...+..-++.....+..+++|||...+.|+|++|.|++
T Consensus 876 rs--------------P~~L~~~~~~~~~~~Skl~~~-----~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l 936 (1205)
T KOG0606|consen 876 RS--------------PLPLVGHYLNGGDLPSKLHNS-----GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLL 936 (1205)
T ss_pred CC--------------CcchhhHHhccCCchhhhhcC-----CCcccccccchhHHHHhhhhccccchhhcccccccchh
Confidence 11 248999999999999998862 24566666667777899999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccc---------------------cccCCCCCCCCccCCCcccchhhhcc
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCC---------------------IAHRGIPAPDVCVGTPRWMAPEVLRA 1020 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~---------------------~~~~~~~~~~~~~GT~~Y~APE~l~~ 1020 (1142)
+..+ +..++.|||............. .............||+.|.+||...+
T Consensus 937 ~~~~-------gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg 1009 (1205)
T KOG0606|consen 937 IAYD-------GHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG 1009 (1205)
T ss_pred hccc-------CCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc
Confidence 9877 7899999984432211100000 00000112345679999999999987
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhh
Q 001142 1021 MHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE 1100 (1142)
Q Consensus 1021 ~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1100 (1142)
...+..+|+|++|++++|.++|.+||....+.++++.+..+..+... ....
T Consensus 1010 ----~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~-------------------------g~~~ 1060 (1205)
T KOG0606|consen 1010 ----RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPE-------------------------GPEE 1060 (1205)
T ss_pred ----ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCC-------------------------Cccc
Confidence 44568899999999999999999999988888877776554433211 1124
Q ss_pred hHHHHHHHHHHhcccCCCCCCCHH---HHHHHHHhhcCCC
Q 001142 1101 TLSFLVDVFRRCTEENPTERPTAG---DLYEMFVARTSSS 1137 (1142)
Q Consensus 1101 ~~~~L~dLI~~CL~~DP~~RPSa~---EVL~~L~~~~ss~ 1137 (1142)
.+....+++...+..+|.+|-.|. ++-.|.+++...+
T Consensus 1061 ~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~ 1100 (1205)
T KOG0606|consen 1061 GSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDW 1100 (1205)
T ss_pred cChhhhhhhhhhhccCchhccCcccccccccCCccCCCCc
Confidence 455688899999999999998776 7777777765543
No 471
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.10 E-value=2.1e-10 Score=137.23 Aligned_cols=149 Identities=15% Similarity=0.163 Sum_probs=95.9
Q ss_pred eeecccCceEEEEEEE-CCccEEEEEEecccCCC--------------------------ChHHHHHhHHh------HHH
Q 001142 813 DEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGS--------------------------SADEIRNFEYS------CLG 859 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~--------------------------~~~~~~~~~~~------~~~ 859 (1142)
+.||.|++|.||+|+. .++.||||+.+-..... ...-.+++... +.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 6799999999999997 68899999864221000 00111222222 244
Q ss_pred HHHHHhhCC----CCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHH
Q 001142 860 EVRMLGALR----HSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIA 935 (1142)
Q Consensus 860 Ei~iL~~L~----HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia 935 (1142)
|++.+.+++ |.+-+.+-..+.+- ....+|||||++|++|.++.... .. .. ....++
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-------------~~~~vLvmE~i~G~~L~~~~~~~-~~---~~---~~~~ia 262 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDR-------------TSERVLTMEWIDGIPLSDIAALD-EA---GL---DRKALA 262 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhh-------------cCCceEEEEeECCcccccHHHHH-hc---CC---CHHHHH
Confidence 555555552 22222222222210 01238999999999998876531 11 12 234566
Q ss_pred HHHHH-HHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccc
Q 001142 936 QDVAA-ALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRS 988 (1142)
Q Consensus 936 ~qIa~-gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~ 988 (1142)
.+++. .+..+|..|++|+|+||.||+++.+ +.++++|||++..+..
T Consensus 263 ~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~-------g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 263 ENLARSFLNQVLRDGFFHADLHPGNIFVLKD-------GKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHHHHHHHhCCceeCCCCcccEEECCC-------CcEEEEeCCCeeECCH
Confidence 66666 4788999999999999999999877 7899999999976543
No 472
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.08 E-value=1.5e-10 Score=140.36 Aligned_cols=166 Identities=14% Similarity=0.180 Sum_probs=97.6
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccC--------------------------CCChHHHHHhHHhH
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVC--------------------------GSSADEIRNFEYSC 857 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~--------------------------~~~~~~~~~~~~~~ 857 (1142)
+.+|+. +.||.|++|.||+|+.. ++.||||+.+-... .....-.+++...+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 345666 78999999999999983 78999999652210 00112233555555
Q ss_pred HHHHHHHhhCCCCCccceeeeEecCCCC--CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCC--CCCCHHHHHH
Q 001142 858 LGEVRMLGALRHSCIVEMYGHKISSKWL--PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGE--KHVSVKLALF 933 (1142)
Q Consensus 858 ~~Ei~iL~~L~HpNIVkl~g~~~~~~~~--~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~--~~ls~~~i~~ 933 (1142)
.+|+...... +|+.++...+.+...+ |.... ......+|||||++|+.+.++..- ...+. ..+....+..
T Consensus 198 ~~ElD~~~Ea--~N~~~~~~~f~~~~~v~VP~v~~---d~st~~VLvmE~i~G~~l~d~~~l-~~~g~d~~~la~~~v~~ 271 (537)
T PRK04750 198 HDELDLMREA--ANASQLRRNFEDSDMLYVPEVYW---DYCSETVMVMERMYGIPVSDVAAL-RAAGTDMKLLAERGVEV 271 (537)
T ss_pred HHhhCHHHHH--HHHHHHHHHccCCCCeecceeec---ccCCCceEEEeeecCccHHhHHHH-HhcCCCHHHHHHHHHHH
Confidence 5666555444 3444444433322111 00000 001234799999999999875321 11110 1122333333
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccc
Q 001142 934 IAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRS 988 (1142)
Q Consensus 934 Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~ 988 (1142)
++.| ++..|++|+|+||.||+++.++. ..+.++++|||++..+..
T Consensus 272 ~~~Q-------if~~GffHaDpHPGNIlv~~~g~---~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 272 FFTQ-------VFRDGFFHADMHPGNIFVSYDPP---ENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHH-------HHhCCeeeCCCChHHeEEecCCC---CCCeEEEEecceEEECCH
Confidence 3333 44699999999999999987621 124899999999987654
No 473
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.07 E-value=5e-10 Score=115.71 Aligned_cols=127 Identities=16% Similarity=0.196 Sum_probs=91.8
Q ss_pred eeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCc-cceeeeEecCCCCCCCCC
Q 001142 812 CDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI-VEMYGHKISSKWLPSADG 890 (1142)
Q Consensus 812 ~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI-Vkl~g~~~~~~~~~~~~~ 890 (1142)
.+.|+.|.++.||+++..+..+++|+..... .....+ .+|+.+++.+.+.++ .+++.+..+
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~-----~~~~~~----~~E~~~l~~l~~~~~~P~~~~~~~~--------- 64 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGT-----ELLINR----ENEAENSKLAAEAGIGPKLYYFDPE--------- 64 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCc-----ccccCH----HHHHHHHHHHHHhCCCCceEEEeCC---------
Confidence 4678999999999999988889999753221 011122 578999988865444 345544321
Q ss_pred CCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCc-----cccCCCCCCeeeccc
Q 001142 891 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHI-----MHRDIKSENILIDLE 965 (1142)
Q Consensus 891 ~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gI-----vHrDLKp~NILld~~ 965 (1142)
..++||||++|.++... . .....++.+++.+|..||+.++ +|+|++|.||+++ +
T Consensus 65 -------~~~lv~e~i~G~~l~~~--~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~ 123 (170)
T cd05151 65 -------TGVLITEFIEGSELLTE--D-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-D 123 (170)
T ss_pred -------CCeEEEEecCCCccccc--c-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-C
Confidence 12799999998876542 0 0113456789999999999885 9999999999998 3
Q ss_pred cccCCCCCeEEEeecCCcc
Q 001142 966 RKKADGKPVVKLCDFDRAV 984 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~ 984 (1142)
+.++++|||.+.
T Consensus 124 -------~~~~liDf~~a~ 135 (170)
T cd05151 124 -------GRLWLIDWEYAG 135 (170)
T ss_pred -------CeEEEEeccccc
Confidence 568999999874
No 474
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.06 E-value=1.7e-10 Score=136.79 Aligned_cols=254 Identities=22% Similarity=0.160 Sum_probs=175.1
Q ss_pred CCCCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCCh-HHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEec
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSA-DEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKIS 881 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~-~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~ 881 (1142)
...+|..+..||.|.|+.|+.+..+ ...+.++++.+....... .++.. ..|+.+...+. |.+++.++..+..
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~s-----l~ev~l~~~l~~~~~~~g~~~~W~~ 337 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFS-----LGEVILEAILGSHLPSVGKNSSWSQ 337 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcc-----hhhhhHhhHhhcccccCCCCCCccc
Confidence 3567889999999999999998764 344444444343332222 22222 57888888875 9999988777665
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. +.|+--|||+++++...+.- ...+++...+++..|++.++.++|+..++|+|+||+||+
T Consensus 338 ~r--------------~~~ip~e~~~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~ 398 (524)
T KOG0601|consen 338 LR--------------QGYIPLEFCEGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNIL 398 (524)
T ss_pred cc--------------cccCchhhhcCcchhhhhHH-----HHhcCcchhhhhHHHHHhccccccchhhhccccccccee
Confidence 33 23688899999987766532 235788899999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCccc-chhhhccccCCCCCCchhhHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWM-APEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~-APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+..++ +..+++|||.++.+..... ...+.-.++ ..|++.. ...+..+.|++|||.-+
T Consensus 399 i~~~~------~~~~~~~~~~~t~~~~~~~-------------~~~~~~r~~p~~~~~~e---~~~~~~~~~~~sl~~~~ 456 (524)
T KOG0601|consen 399 ISNDG------FFSKLGDFGCWTRLAFSSG-------------VFHHIDRLYPIAEILLE---DYPHLSKADIFSLGLSV 456 (524)
T ss_pred eccch------hhhhccccccccccceecc-------------cccccccccccchhhcc---ccccccccccccccccc
Confidence 97752 5688999999865332111 112233344 3555543 25677999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
.+.+++..--... .....+..+..+..+ .....+..+...+...++..|
T Consensus 457 ~e~~~~~~ls~~~---~~~~~i~~~~~p~~~----------------------------~~~~~~q~~~kv~~~~~~~~~ 505 (524)
T KOG0601|consen 457 DEAITGSPLSESG---VQSLTIRSGDTPNLP----------------------------GLKLQLQVLLKVMINPDRKRR 505 (524)
T ss_pred cccccCcccCccc---ccceeeecccccCCC----------------------------chHHhhhhhhhhhcCCccccc
Confidence 9999885422111 112233333333322 222457778889999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
|.+.++..|..+...
T Consensus 506 ~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 506 PSAVELSLHSEFYRD 520 (524)
T ss_pred hhhhhhcccchhhhh
Confidence 999999888766543
No 475
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.05 E-value=2.2e-09 Score=110.44 Aligned_cols=153 Identities=22% Similarity=0.239 Sum_probs=108.5
Q ss_pred eeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001142 811 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 890 (1142)
Q Consensus 811 l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~ 890 (1142)
....|-||+-+.|+++.+.++...+|-...+.-..+.-+.+--..+..+|++++.++.--.|.-..=++.+..
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~------- 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY------- 83 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-------
Confidence 5678889999999999999999888876544333333333334567789999999886333332222233221
Q ss_pred CCccccceEEEEEeccCC-CCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 891 NPEHHLLQSAIFMEYVKG-GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 891 ~~~~~~~~~~LVmEy~~g-gSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
.-.|+|||++| .++.+++...-... ........++.+|-..+.-||.++||||||..+||++..++
T Consensus 84 -------~~~i~ME~~~g~~~vk~~i~~~~~~~---~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~--- 150 (229)
T KOG3087|consen 84 -------GGQIYMEFIDGASTVKDFILSTMEDE---SEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDG--- 150 (229)
T ss_pred -------CCeEEEEeccchhHHHHHHHHHccCc---ccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCC---
Confidence 11799999985 38888887643221 22233367888889999999999999999999999997663
Q ss_pred CCCCeEEEeecCCcc
Q 001142 970 DGKPVVKLCDFDRAV 984 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~ 984 (1142)
....+.++|||++.
T Consensus 151 -~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 151 -NQITPILIDFGLSS 164 (229)
T ss_pred -CcCceEEEeecchh
Confidence 23667999999984
No 476
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.04 E-value=6.8e-11 Score=128.01 Aligned_cols=136 Identities=24% Similarity=0.284 Sum_probs=113.7
Q ss_pred cchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCC
Q 001142 155 TLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQR 234 (1142)
Q Consensus 155 ~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~ 234 (1142)
.....+..+..|+.|||++|.|+.|.+++.-++.++.|+||+|.|..+-. +..|++|+.||||+|.|+.+-.+-..|-+
T Consensus 275 ~~~~~~dTWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGN 353 (490)
T KOG1259|consen 275 SALVSADTWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLAECVGWHLKLGN 353 (490)
T ss_pred ceEEecchHhhhhhccccccchhhhhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhHhhhhhHhhhcC
Confidence 33344555678999999999999999999999999999999999998854 88999999999999999998777777889
Q ss_pred CCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC------CCCCCchhhccCCCCCCCCCCC
Q 001142 235 LENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS------YCQVPSWICCNLEGNGKDSSND 293 (1142)
Q Consensus 235 L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~------~~~iP~~~~~~l~~n~l~~~~~ 293 (1142)
++.|.|+.|.|..+. .+..|-+|..||+++|++.. +..+|-.-...+..|++.....
T Consensus 354 IKtL~La~N~iE~LS--GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 354 IKTLKLAQNKIETLS--GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred EeeeehhhhhHhhhh--hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 999999999998774 47889999999999999865 4467766666666666655443
No 477
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.03 E-value=2.7e-09 Score=110.52 Aligned_cols=135 Identities=20% Similarity=0.276 Sum_probs=97.9
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHh-HHhHHHHHHHHhhCCCCCc--cceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNF-EYSCLGEVRMLGALRHSCI--VEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~-~~~~~~Ei~iL~~L~HpNI--Vkl~g~~~~~~~~~~~~ 889 (1142)
..+++|+-+.||.+.|.+..+.+|... ++....+.-.+.+ ..+..+|+.++.+++--.| ..++++ +.+
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri-~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv--D~~------ 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLPAVVKERI-PKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV--DPD------ 72 (204)
T ss_pred chhhCCcceeEEeeeccCcceEEEeec-CcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE--cCC------
Confidence 468899999999999988788888753 3333333222222 4567899999999864333 334433 222
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
...|+|||++|..|.+.+... . ..++..|-.-+.-||..||+|+||.++||++..+
T Consensus 73 --------~~~I~me~I~G~~lkd~l~~~--------~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~---- 128 (204)
T COG3642 73 --------NGLIVMEYIEGELLKDALEEA--------R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG---- 128 (204)
T ss_pred --------CCEEEEEEeCChhHHHHHHhc--------c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC----
Confidence 227999999988888888761 1 3455566666778999999999999999999764
Q ss_pred CCCCeEEEeecCCcc
Q 001142 970 DGKPVVKLCDFDRAV 984 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~ 984 (1142)
.+.++|||++.
T Consensus 129 ----~i~~IDfGLg~ 139 (204)
T COG3642 129 ----RIYFIDFGLGE 139 (204)
T ss_pred ----cEEEEECCccc
Confidence 49999999985
No 478
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.02 E-value=2e-10 Score=120.09 Aligned_cols=109 Identities=30% Similarity=0.388 Sum_probs=41.6
Q ss_pred cCCCCCcEEEccCCCCCccCcccC-CCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCcccc-CCCCCCEE
Q 001142 161 AGLKCLTKLSVCHFSIRYLPPEIG-CLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLY-LLQRLENL 238 (1142)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~IP~~l~-~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~-~L~~L~~L 238 (1142)
.+...++.|+|.+|.|+.|. .++ .+.+|+.|+|++|.|+.|+ .+..+++|+.|+|++|+|+.|+..+. .+++|+.|
T Consensus 16 ~n~~~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L 93 (175)
T PF14580_consen 16 NNPVKLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITKLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQEL 93 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S--T-T----TT--EEE--SS---S-CHHHHHH-TT--EE
T ss_pred cccccccccccccccccccc-chhhhhcCCCEEECCCCCCcccc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEE
Confidence 44556788888888888773 455 5788888888888888875 57778888888888888888876664 57888888
Q ss_pred eCcCCcCCCCCc-ccccCCCCCCEEEccCCCCCC
Q 001142 239 DLSNNRLTSLGS-LDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 239 ~Ls~N~Ls~~~p-~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|++|+|..+.. ..+..+++|+.|+|.+||++.
T Consensus 94 ~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 94 YLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp E-TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred ECcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 888888876543 246778888888888888875
No 479
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.00 E-value=5.3e-11 Score=135.07 Aligned_cols=206 Identities=21% Similarity=0.190 Sum_probs=145.6
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-C--ccccCCcCCcEEEccCCCCCcCchh--hcC
Q 001142 38 NDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-P--KSVGRYEKLRNLKFFGNEINLFPSE--VGN 112 (1142)
Q Consensus 38 ~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P--~~l~~L~~L~~L~Ls~N~L~~lP~~--l~~ 112 (1142)
++++.|+.+.|.+..+.-...+ +....|++++.|||+.|.|... | .-...|++|+.|+|+.|.+...-++ -..
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~--~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIE--EYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhHHhhhheeecCccccccchh--hhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 3566788888888776543332 3345568888889988888755 2 2346788888899988888643222 235
Q ss_pred CCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccC--cccCCCCC
Q 001142 113 LLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLP--PEIGCLSN 188 (1142)
Q Consensus 113 L~~L~~L~Ls~N~l~~--~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP--~~l~~L~~ 188 (1142)
+++|+.|.|+.+.++. +......+++|+.|+|..|. +-.....+ ...+..|+.|+|++|++-..+ ...+.|+.
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~-~~~~~~~~--~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~ 272 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANE-IILIKATS--TKILQTLQELDLSNNNLIDFDQGYKVGTLPG 272 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhccc-ccceecch--hhhhhHHhhccccCCcccccccccccccccc
Confidence 7788888888777653 22346678888888888864 11222222 234567888999999988776 45688999
Q ss_pred CCEEEccCCCCCcc--chh-----hcCCCCCCEEEccCCCCCccC--ccccCCCCCCEEeCcCCcCCCC
Q 001142 189 LEQLDLSFNKMKYL--PTE-----ICYLKALISLKVANNKLVELP--SGLYLLQRLENLDLSNNRLTSL 248 (1142)
Q Consensus 189 L~~L~Ls~N~L~~l--P~~-----l~~L~~L~~L~Ls~N~Ls~IP--~~l~~L~~L~~L~Ls~N~Ls~~ 248 (1142)
|..|+++.+.|.+| |+. ...+++|++|+++.|++..++ ..+..+.+|+.|....|.|+..
T Consensus 273 L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 273 LNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKE 341 (505)
T ss_pred hhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccccccc
Confidence 99999999999844 554 345789999999999997665 3455577888888888888754
No 480
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.96 E-value=5e-11 Score=132.33 Aligned_cols=232 Identities=19% Similarity=0.174 Sum_probs=135.4
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccC-CCCCCCccEEEeecCCCC----ccCcc-------ccCCcCCcEEEccCCCCC-
Q 001142 38 NDDDDDSVIDVSGKTVDFPLIESYGN-RGGDNSVEGLYLYKNVLN----LIPKS-------VGRYEKLRNLKFFGNEIN- 104 (1142)
Q Consensus 38 ~~l~~L~~LdLs~N~L~~~~p~~~~~-l~~L~~L~~L~Ls~N~Lt----~iP~~-------l~~L~~L~~L~Ls~N~L~- 104 (1142)
.....++.|+||+|.|...-..+++. +...++|+.-++++=-.+ +||+. +-..+.|++||||.|.|+
T Consensus 27 ~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~ 106 (382)
T KOG1909|consen 27 EPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGP 106 (382)
T ss_pred cccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCc
Confidence 34556777788888775433332221 233356677776654222 45543 234457777888888776
Q ss_pred cCchh----hcCCCCCCEEEccCCCCCCCccc--------------ccCCCCCCEEECCCCCCCCCccc-chhhhcCCCC
Q 001142 105 LFPSE----VGNLLGLECLQIKISSPGVNGFA--------------LNKLKGLKELELSKVPPRPSVLT-LLSEIAGLKC 165 (1142)
Q Consensus 105 ~lP~~----l~~L~~L~~L~Ls~N~l~~~~~~--------------~~~L~~L~~L~Ls~n~~n~~~~~-lp~~l~~L~~ 165 (1142)
.-+.. +..++.|+.|+|.+|.++..+.. ...-+.|+.+....|.+-+.... +-..|...+.
T Consensus 107 ~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~ 186 (382)
T KOG1909|consen 107 KGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPT 186 (382)
T ss_pred cchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccc
Confidence 32322 45567777777777665544321 12334566676666655433322 2233555567
Q ss_pred CcEEEccCCCCCc--c---CcccCCCCCCCEEEccCCCCC-----ccchhhcCCCCCCEEEccCCCCC-----ccCcccc
Q 001142 166 LTKLSVCHFSIRY--L---PPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLV-----ELPSGLY 230 (1142)
Q Consensus 166 L~~L~Ls~N~L~~--I---P~~l~~L~~L~~L~Ls~N~L~-----~lP~~l~~L~~L~~L~Ls~N~Ls-----~IP~~l~ 230 (1142)
|+.+.+..|.|.. + -..|..+++|+.|||.+|-|+ .+-..+..+++|+.|+++.+.|+ .+-..+.
T Consensus 187 leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~ 266 (382)
T KOG1909|consen 187 LEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALK 266 (382)
T ss_pred cceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHh
Confidence 7777777777651 1 234566777777777777776 23455666777777777777775 2223333
Q ss_pred C-CCCCCEEeCcCCcCCCC----CcccccCCCCCCEEEccCCCC
Q 001142 231 L-LQRLENLDLSNNRLTSL----GSLDLCLMHNLQNLNLQYNKL 269 (1142)
Q Consensus 231 ~-L~~L~~L~Ls~N~Ls~~----~p~~l~~L~~L~~L~Ls~N~L 269 (1142)
. .++|++|.|.+|.|+.- +...+...+.|..|+|++|.|
T Consensus 267 ~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l 310 (382)
T KOG1909|consen 267 ESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRL 310 (382)
T ss_pred ccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCcccc
Confidence 2 56777777777777632 122344567777777777777
No 481
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.90 E-value=1.3e-10 Score=129.09 Aligned_cols=230 Identities=18% Similarity=0.174 Sum_probs=175.4
Q ss_pred CCcccccCCCCCCcccCC----CCCCCCCCCCEEEccCC---CCCCCCcccc----cCCCCCCCccEEEeecCCCC-c-c
Q 001142 17 PIKEKLPSEANKINNEKN----GSVNDDDDDSVIDVSGK---TVDFPLIESY----GNRGGDNSVEGLYLYKNVLN-L-I 83 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~----~~f~~l~~L~~LdLs~N---~L~~~~p~~~----~~l~~L~~L~~L~Ls~N~Lt-~-i 83 (1142)
..+.+|.+++|.+..--. ..+.+.++|+..++|+= ++...+|+.+ ..+-+.++|++|+||.|-|+ . +
T Consensus 30 ~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~ 109 (382)
T KOG1909|consen 30 DSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGI 109 (382)
T ss_pred CceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccch
Confidence 377889999998865432 45667789999999874 2333344432 22345579999999999998 3 3
Q ss_pred Cc---cccCCcCCcEEEccCCCCCcCc--------------hhhcCCCCCCEEEccCCCCCCCcc-----cccCCCCCCE
Q 001142 84 PK---SVGRYEKLRNLKFFGNEINLFP--------------SEVGNLLGLECLQIKISSPGVNGF-----ALNKLKGLKE 141 (1142)
Q Consensus 84 P~---~l~~L~~L~~L~Ls~N~L~~lP--------------~~l~~L~~L~~L~Ls~N~l~~~~~-----~~~~L~~L~~ 141 (1142)
+. -|.++..|++|+|.||.++..- .-++.-++|+++....|++..-+. .|...+.|+.
T Consensus 110 ~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~lee 189 (382)
T KOG1909|consen 110 RGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEE 189 (382)
T ss_pred HHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccce
Confidence 32 3567889999999999987331 123556789999999999887763 5778899999
Q ss_pred EECCCCCCCCCcc-cchhhhcCCCCCcEEEccCCCCCc-----cCcccCCCCCCCEEEccCCCCCc-----cchhhc-CC
Q 001142 142 LELSKVPPRPSVL-TLLSEIAGLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKY-----LPTEIC-YL 209 (1142)
Q Consensus 142 L~Ls~n~~n~~~~-~lp~~l~~L~~L~~L~Ls~N~L~~-----IP~~l~~L~~L~~L~Ls~N~L~~-----lP~~l~-~L 209 (1142)
+.+..|.+..... .+-..|..+++|++|+|..|-|+. +...+..+++|+.|+++++.|+. +-..+. ..
T Consensus 190 vr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~ 269 (382)
T KOG1909|consen 190 VRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESA 269 (382)
T ss_pred EEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccC
Confidence 9999988754443 455678899999999999999983 35567888999999999999982 334443 37
Q ss_pred CCCCEEEccCCCCC-----ccCccccCCCCCCEEeCcCCcCC
Q 001142 210 KALISLKVANNKLV-----ELPSGLYLLQRLENLDLSNNRLT 246 (1142)
Q Consensus 210 ~~L~~L~Ls~N~Ls-----~IP~~l~~L~~L~~L~Ls~N~Ls 246 (1142)
++|+.|.|.+|.++ .+-..+...+.|..|+|++|+|.
T Consensus 270 p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 270 PSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred CCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 89999999999997 33456677899999999999993
No 482
>PLN03150 hypothetical protein; Provisional
Probab=98.75 E-value=1.7e-08 Score=126.21 Aligned_cols=111 Identities=23% Similarity=0.358 Sum_probs=101.0
Q ss_pred CCcEEEccCCCCC-ccCcccCCCCCCCEEEccCCCCC-ccchhhcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeCc
Q 001142 165 CLTKLSVCHFSIR-YLPPEIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLS 241 (1142)
Q Consensus 165 ~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~L~Ls 241 (1142)
.++.|+|++|.++ .+|..++.|++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|+ .+|..+++|++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 3788999999998 78999999999999999999998 89999999999999999999998 899999999999999999
Q ss_pred CCcCCCCCcccccCC-CCCCEEEccCCCCCCCCCCCc
Q 001142 242 NNRLTSLGSLDLCLM-HNLQNLNLQYNKLLSYCQVPS 277 (1142)
Q Consensus 242 ~N~Ls~~~p~~l~~L-~~L~~L~Ls~N~L~~~~~iP~ 277 (1142)
+|+|+|.+|..+..+ .++..+++.+|+..| .+|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc--~~p~ 533 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLC--GIPG 533 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCcccc--CCCC
Confidence 999999999888764 477899999998765 4553
No 483
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.73 E-value=8.5e-08 Score=115.14 Aligned_cols=142 Identities=18% Similarity=0.255 Sum_probs=108.0
Q ss_pred HHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHH
Q 001142 858 LGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQD 937 (1142)
Q Consensus 858 ~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~q 937 (1142)
.+-+.-|+.++||||+++++.++.++. .|||+|-+. -|..+++. +....+...+.|
T Consensus 57 ~~A~k~lKtlRHP~Il~yL~t~e~~~~--------------~ylvTErV~--Pl~~~lk~--------l~~~~v~~Gl~q 112 (690)
T KOG1243|consen 57 KRAVKRLKTLRHPNILSYLDTTEEEGT--------------LYLVTERVR--PLETVLKE--------LGKEEVCLGLFQ 112 (690)
T ss_pred HHHHHHhhhccCchhhhhhhhhcccCc--------------eEEEeeccc--cHHHHHHH--------hHHHHHHHHHHH
Confidence 567788999999999999999887664 499999984 67888876 335667778899
Q ss_pred HHHHHHHHH-hCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchh
Q 001142 938 VAAALVELH-SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPE 1016 (1142)
Q Consensus 938 Ia~gL~yLH-s~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 1016 (1142)
|+.||.||| ..+++|++|.-.-|+|+.. |..||++|..+........ ......---.|..|+
T Consensus 113 Il~AL~FL~~d~~lvHgNv~~~SVfVn~~-------GeWkLggle~v~~~~~~~~----------~~~~~~~~~s~~~P~ 175 (690)
T KOG1243|consen 113 ILAALSFLNDDCNLVHGNVCKDSVFVNES-------GEWKLGGLELVSKASGFNA----------PAKSLYLIESFDDPE 175 (690)
T ss_pred HHHHHHHHhccCCeeeccEeeeeEEEcCC-------CcEEEeeeEEEeccccCCc----------ccccchhhhcccChh
Confidence 999999998 5689999999999999988 8899999998854332211 000111122356666
Q ss_pred hhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 1017 VLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 1017 ~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
.+.. -+...|.|-||++++|++.|
T Consensus 176 ~~~~------s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 176 EIDP------SEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hcCc------cccchhhhhHHHHHHHHhCc
Confidence 5432 11457999999999999998
No 484
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.70 E-value=2.8e-07 Score=103.28 Aligned_cols=151 Identities=16% Similarity=0.131 Sum_probs=98.0
Q ss_pred CceEEEEEEECCccEEEEEEecccCCCChHHHHHh-----H-HhHHHHHHHHhhCCCC--CccceeeeEecCCCCCCCCC
Q 001142 819 VSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNF-----E-YSCLGEVRMLGALRHS--CIVEMYGHKISSKWLPSADG 890 (1142)
Q Consensus 819 sfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~-----~-~~~~~Ei~iL~~L~Hp--NIVkl~g~~~~~~~~~~~~~ 890 (1142)
....|+++.+.+..+.+|...... .....+.+ . ..+.+|...+.++..- .+.+.+++......
T Consensus 34 ~~rrvvr~~~~g~~~~vKr~~~~~---~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~------ 104 (268)
T PRK15123 34 EGRRTLRFELAGKSYFLKWHRGTG---WGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSN------ 104 (268)
T ss_pred CCceEEEEEECCEEEEEEEecCCc---HHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCC------
Confidence 334466788888888888653211 00001110 0 0246888888887432 33444555543110
Q ss_pred CCccccceEEEEEeccCCC-CHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 891 NPEHHLLQSAIFMEYVKGG-SVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 891 ~~~~~~~~~~LVmEy~~gg-SL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
......+||||++++. +|.+++.... ....+......++.+++..+.-||..||+|+|++++|||++.+....
T Consensus 105 ---~~~~~s~LVte~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~ 178 (268)
T PRK15123 105 ---PATRTSFIITEDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGR 178 (268)
T ss_pred ---CccceeEEEEeeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCC
Confidence 0122468999999875 8999986421 13456677889999999999999999999999999999997520001
Q ss_pred CCCCeEEEeecCCcc
Q 001142 970 DGKPVVKLCDFDRAV 984 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~ 984 (1142)
.+...+.|+||+.+.
T Consensus 179 ~~~~~~~LIDl~r~~ 193 (268)
T PRK15123 179 EEDLKLSVIDLHRAQ 193 (268)
T ss_pred CCCceEEEEECCccc
Confidence 123689999999874
No 485
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.70 E-value=5.7e-08 Score=103.12 Aligned_cols=131 Identities=21% Similarity=0.243 Sum_probs=82.8
Q ss_pred EEEEEEE-CCccEEEEEEecccCCCCh------------------HHHHHhHHhHHHHHHHHhhCCCC--CccceeeeEe
Q 001142 822 SLFRCKF-GSADAAAKVRTLKVCGSSA------------------DEIRNFEYSCLGEVRMLGALRHS--CIVEMYGHKI 880 (1142)
Q Consensus 822 ~Vy~a~~-~~~~vAvKi~~l~~~~~~~------------------~~~~~~~~~~~~Ei~iL~~L~Hp--NIVkl~g~~~ 880 (1142)
.||.|.. .+..+|+|+.+........ ........++.+|+++|.++..- ++.+++++..
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~ 80 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNR 80 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEET
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeC
Confidence 3899887 5778999998754332211 11222245678999999999754 5667765532
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccC--CCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHH-HHhCCccccCCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVK--GGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVE-LHSKHIMHRDIKS 957 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~--ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~y-LHs~gIvHrDLKp 957 (1142)
+ +|||||++ |..+..+... .++......++.+++..+.. +|..||+||||.+
T Consensus 81 --~----------------~ivME~I~~~G~~~~~l~~~-------~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~ 135 (188)
T PF01163_consen 81 --N----------------VIVMEYIGEDGVPLPRLKDV-------DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSE 135 (188)
T ss_dssp --T----------------EEEEE--EETTEEGGCHHHC-------GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-ST
T ss_pred --C----------------EEEEEecCCCccchhhHHhc-------cccchhHHHHHHHHHHHHHHHHHhcCceecCCCh
Confidence 1 89999998 6555443321 12234556777888886655 5799999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCccc
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
.|||++.+ .+.++|||.+..
T Consensus 136 ~NIlv~~~--------~~~iIDf~qav~ 155 (188)
T PF01163_consen 136 YNILVDDG--------KVYIIDFGQAVD 155 (188)
T ss_dssp TSEEEETT--------CEEE--GTTEEE
T ss_pred hhEEeecc--------eEEEEecCccee
Confidence 99999864 699999998864
No 486
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.70 E-value=5.8e-08 Score=104.42 Aligned_cols=143 Identities=19% Similarity=0.191 Sum_probs=97.0
Q ss_pred eeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC--CCccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--SCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H--pNIVkl~g~~~~~~~~~~~~ 889 (1142)
+.|+.|.++.||+++..+ ..+++|+....... ..... +.+|+++++.+.+ .++.+++.+......
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~---~~~~~----~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~----- 71 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL---PSAHD----VAREYRVLRALAGTGVPVPKVLALCEDPSV----- 71 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC---ccccc----HHHHHHHHHHhhCCCCCCCCEEEECCCCCc-----
Confidence 678999999999998865 78888874322110 11122 3689999999965 445667766543210
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh----------------------
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---------------------- 947 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs---------------------- 947 (1142)
....++||||++|.++.+.+.. ..++......++.+++++|.+||+
T Consensus 72 ------~~~~~~v~e~i~G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~ 139 (223)
T cd05154 72 ------LGTPFYVMERVDGRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQV 139 (223)
T ss_pred ------cCCceEEEEEeCCEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHH
Confidence 0123899999998877654321 135666666667777777777763
Q ss_pred ----------------------------------CCccccCCCCCCeeeccccccCCCCCeEEEeecCCcc
Q 001142 948 ----------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 984 (1142)
Q Consensus 948 ----------------------------------~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~ 984 (1142)
..++|+|+.|.||+++.+. ...+.|+||+.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~-----~~~~~iID~e~~~ 205 (223)
T cd05154 140 ARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDE-----PRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCC-----CcEEEEEeccccc
Confidence 2469999999999998721 0568999999874
No 487
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.68 E-value=1.1e-08 Score=130.83 Aligned_cols=198 Identities=22% Similarity=0.242 Sum_probs=131.6
Q ss_pred ccccCCCCCCcccCCCCCCCCCCCCEEEccCCC--CCCCCcccccCCCCCCCccEEEeecC-CCCccCccccCCcCCcEE
Q 001142 20 EKLPSEANKINNEKNGSVNDDDDDSVIDVSGKT--VDFPLIESYGNRGGDNSVEGLYLYKN-VLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 20 ~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~--L~~~~p~~~~~l~~L~~L~~L~Ls~N-~Lt~iP~~l~~L~~L~~L 96 (1142)
..+.+..|++..+... ...+.|++|-+..|. +.....+.|..+ +.|..|||++| .++++|..|+.|-+|++|
T Consensus 526 rr~s~~~~~~~~~~~~--~~~~~L~tLll~~n~~~l~~is~~ff~~m---~~LrVLDLs~~~~l~~LP~~I~~Li~LryL 600 (889)
T KOG4658|consen 526 RRMSLMNNKIEHIAGS--SENPKLRTLLLQRNSDWLLEISGEFFRSL---PLLRVLDLSGNSSLSKLPSSIGELVHLRYL 600 (889)
T ss_pred eEEEEeccchhhccCC--CCCCccceEEEeecchhhhhcCHHHHhhC---cceEEEECCCCCccCcCChHHhhhhhhhcc
Confidence 4455556666655432 234478899999986 554555445444 89999999976 567899999999999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001142 97 KFFGNEINLFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1142)
+|++..|+.+|..+.+|..|.+|++..+. +..++.....|.+|++|.+-.-. .........++.+|.+|+.|......
T Consensus 601 ~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~-~~~~~~~l~el~~Le~L~~ls~~~~s 679 (889)
T KOG4658|consen 601 DLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSA-LSNDKLLLKELENLEHLENLSITISS 679 (889)
T ss_pred cccCCCccccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccc-cccchhhHHhhhcccchhhheeecch
Confidence 99999999999999999999999998777 55566677779999999887633 12233334455666777666664444
Q ss_pred CCccCcccCCCCCCC----EEEccCCCCCccchhhcCCCCCCEEEccCCCCCc
Q 001142 176 IRYLPPEIGCLSNLE----QLDLSFNKMKYLPTEICYLKALISLKVANNKLVE 224 (1142)
Q Consensus 176 L~~IP~~l~~L~~L~----~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~ 224 (1142)
. .+-..+..+++|. .+.+..+.....+..+..+.+|+.|.+.+..+++
T Consensus 680 ~-~~~e~l~~~~~L~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~e 731 (889)
T KOG4658|consen 680 V-LLLEDLLGMTRLRSLLQSLSIEGCSKRTLISSLGSLGNLEELSILDCGISE 731 (889)
T ss_pred h-HhHhhhhhhHHHHHHhHhhhhcccccceeecccccccCcceEEEEcCCCch
Confidence 3 1112222222222 3333334444556667777777777777776653
No 488
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.65 E-value=9.6e-09 Score=131.32 Aligned_cols=251 Identities=23% Similarity=0.211 Sum_probs=153.4
Q ss_pred CCCcccccCCCCC--CcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCC
Q 001142 16 GPIKEKLPSEANK--INNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKL 93 (1142)
Q Consensus 16 ~~~l~~L~~~~N~--i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L 93 (1142)
.+.+.+|-+-.|. +..+....|..++.|++||||+|.=-+.+|+.++.+ -+|++|+|++..++.+|..|.+|..|
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~L---i~LryL~L~~t~I~~LP~~l~~Lk~L 620 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGEL---VHLRYLDLSDTGISHLPSGLGNLKKL 620 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhh---hhhhcccccCCCccccchHHHHHHhh
Confidence 3367777777886 888888889999999999999987667788877665 89999999999999999999999999
Q ss_pred cEEEccCCCCC-cCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc----E
Q 001142 94 RNLKFFGNEIN-LFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT----K 168 (1142)
Q Consensus 94 ~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~----~ 168 (1142)
.+|++..+.-- .+|..+..|++|++|.+...........+..+.+|++|..-....... .+...+..+..|. .
T Consensus 621 ~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~ 698 (889)
T KOG4658|consen 621 IYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQS 698 (889)
T ss_pred heeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHh
Confidence 99999988754 555656679999999996655333333344444444444333221111 1111222222222 3
Q ss_pred EEccCCCCCccCcccCCCCCCCEEEccCCCCCccch-hhcC------CCCCCEEEccCCCCCccCccccCCCCCCEEeCc
Q 001142 169 LSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPT-EICY------LKALISLKVANNKLVELPSGLYLLQRLENLDLS 241 (1142)
Q Consensus 169 L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~-~l~~------L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls 241 (1142)
+.+..+.....+..+..+.+|+.|.+.+..+.++.. .... +++|..+...+...-..+.+.--.++|+.|.+.
T Consensus 699 l~~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~~f~~~L~~l~l~ 778 (889)
T KOG4658|consen 699 LSIEGCSKRTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHMLRDLTWLLFAPHLTSLSLV 778 (889)
T ss_pred hhhcccccceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccccccchhhccCcccEEEEe
Confidence 333334444556667777888888887777764321 1111 111222211111111223333334667777776
Q ss_pred CCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 242 NNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 242 ~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
.......+......+..+..+-+..+.+.+
T Consensus 779 ~~~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 779 SCRLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred cccccccCCCHHHHhhhcccEEeccccccc
Confidence 555444433344455555544454454444
No 489
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.60 E-value=4.5e-10 Score=133.39 Aligned_cols=179 Identities=27% Similarity=0.293 Sum_probs=120.1
Q ss_pred CccccCCcCCcEEEccCCCCCcCchhhcCC-CCCCEEEccCCCCCCCccccc----------CCCCCCEEECCCCCCCCC
Q 001142 84 PKSVGRYEKLRNLKFFGNEINLFPSEVGNL-LGLECLQIKISSPGVNGFALN----------KLKGLKELELSKVPPRPS 152 (1142)
Q Consensus 84 P~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L-~~L~~L~Ls~N~l~~~~~~~~----------~L~~L~~L~Ls~n~~n~~ 152 (1142)
|-.|..+.+|++|.|.+..|+..- .+..| ..|+.|-. .|.+..+...|. ....|...+.+.|.+
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~-GL~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L--- 176 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAK-GLQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRL--- 176 (1096)
T ss_pred CceeccccceeeEEecCcchhhhh-hhHHHHHhhhhhhh-hccHHHHHHHHHHhccccccchhhhhHhhhhcchhhH---
Confidence 445666667777777777765421 11111 12333321 122221111111 122344555555433
Q ss_pred cccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCCCCccCccccC
Q 001142 153 VLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVELPSGLYL 231 (1142)
Q Consensus 153 ~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~Ls~IP~~l~~ 231 (1142)
..+-..+.-++.|+.|+|++|+++.+- .+..|+.|++|||+.|+|..+|. ....+. |+.|.|++|.++++ .++.+
T Consensus 177 -~~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL-~gie~ 252 (1096)
T KOG1859|consen 177 -VLMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL-RGIEN 252 (1096)
T ss_pred -HhHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh-hhHHh
Confidence 233345566788999999999999874 78889999999999999999984 333444 99999999999987 47889
Q ss_pred CCCCCEEeCcCCcCCCCCcc-cccCCCCCCEEEccCCCCCC
Q 001142 232 LQRLENLDLSNNRLTSLGSL-DLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 232 L~~L~~L~Ls~N~Ls~~~p~-~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
|.+|+.|||++|-|.+.-.. .+..|..|..|+|.||++.|
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 99999999999998865432 25677889999999999988
No 490
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.60 E-value=3e-09 Score=104.30 Aligned_cols=115 Identities=22% Similarity=0.214 Sum_probs=88.2
Q ss_pred chhhhcCCCCCcEEEccCCCCCccCcccC-CCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCC
Q 001142 156 LLSEIAGLKCLTKLSVCHFSIRYLPPEIG-CLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQR 234 (1142)
Q Consensus 156 lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~-~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~ 234 (1142)
.+..+.....|+..+|++|.|..+|+.|. .++.++.|+|++|.|+.+|.++..++.|+.|+++.|.|...|.-+..|.+
T Consensus 45 avy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~ 124 (177)
T KOG4579|consen 45 AVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIK 124 (177)
T ss_pred HHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccccCccccchHHHHHHHh
Confidence 34445556677778888888888888774 45578888888888888888888888888888888888888888888888
Q ss_pred CCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 235 LENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 235 L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
|.+|+..+|.+..++-+ +..-..+...++.+|+|.+
T Consensus 125 l~~Lds~~na~~eid~d-l~~s~~~al~~lgnepl~~ 160 (177)
T KOG4579|consen 125 LDMLDSPENARAEIDVD-LFYSSLPALIKLGNEPLGD 160 (177)
T ss_pred HHHhcCCCCccccCcHH-HhccccHHHHHhcCCcccc
Confidence 88888888888877664 3333444455667777776
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.57 E-value=2.6e-08 Score=85.88 Aligned_cols=59 Identities=46% Similarity=0.591 Sum_probs=35.8
Q ss_pred CCCEEEccCCCCCccCc-cccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCC
Q 001142 211 ALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKL 269 (1142)
Q Consensus 211 ~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L 269 (1142)
+|+.|+|++|+|+.||. .+..+++|+.|+|++|+|+.+++..|..+++|+.|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 45666666666666653 334466666666666666666666666666666666666653
No 492
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.49 E-value=4.8e-06 Score=95.11 Aligned_cols=273 Identities=17% Similarity=0.144 Sum_probs=156.9
Q ss_pred ceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
...+.||+|+.+.+|-.-.-. +.+.||+-.. ....+ .+-++.|.+. .||-+-.-+.+=.. .-+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~-d~VAKIYh~P-----ppa~~------aqk~a~la~~p~~p~~~~rvaWPqa-~L~--- 77 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVR-DQVAKIYHAP-----PPAAQ------AQKVAELAATPDAPLLNYRVAWPQA-TLH--- 77 (637)
T ss_pred CCCccccCCccceeeecchhh-chhheeecCC-----CchHH------HHHHHHhccCCCCcchhhhhcccHH-Hhh---
Confidence 466889999999999643322 2345664211 11111 1233445454 57755432222111 000
Q ss_pred CCCCccccceEEEEEeccCCCC-HHHHHH-HHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGS-VKNYIE-KLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggS-L~~~l~-~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..+......+.|+.++|.- ...+.. .++........|...+++++.++.+.+-||+.|.+-||+.++|+|+.++
T Consensus 78 ---G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~- 153 (637)
T COG4248 78 ---GGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDD- 153 (637)
T ss_pred ---CCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecC-
Confidence 1111223689999998641 111111 1112233467899999999999999999999999999999999999887
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhc-cccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR-AMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
..|.|.|=..-..-.... ...-.+|...|.+||... ....+..-+...|.|.||+++++++.
T Consensus 154 ------~~V~LVdsDsfqi~~ng~-----------~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ 216 (637)
T COG4248 154 ------SKVVLVDSDSFQINANGT-----------LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLF 216 (637)
T ss_pred ------ceEEEEcccceeeccCCc-----------eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHh
Confidence 678888744322111100 111336899999999865 22222334577899999999999998
Q ss_pred C-CCCCCCCCHH-----HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhh-hhhHHHHHHHHHHhccc--C
Q 001142 1046 L-QVPYMGLSEL-----EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE-LETLSFLVDVFRRCTEE--N 1116 (1142)
Q Consensus 1046 G-~~Pf~~~~~~-----el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~L~dLI~~CL~~--D 1116 (1142)
| ++||.+.... .....|..+.....++ ...+........+ .-.++++..+..+|+.. .
T Consensus 217 ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~-------------~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~ 283 (637)
T COG4248 217 GGRHPYSGIPLISDAPNPLETDIAHGRFAYASD-------------QRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGV 283 (637)
T ss_pred cCCCCCCcccccCCCCCcchhhhhcceeeechh-------------ccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCC
Confidence 6 9999863210 0111222222111110 0000000000000 13456788889999865 3
Q ss_pred CCCCCCHHHHHHHHHh
Q 001142 1117 PTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~ 1132 (1142)
+.-|||++..+..+-.
T Consensus 284 ~~~RP~a~aW~aAl~a 299 (637)
T COG4248 284 ATPRPTAKAWVAALDA 299 (637)
T ss_pred CCCCCCHHHHHHHHHH
Confidence 5679999887765543
No 493
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.49 E-value=7.4e-08 Score=83.04 Aligned_cols=58 Identities=26% Similarity=0.320 Sum_probs=26.2
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEEccCCC
Q 001142 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLKFFGNE 102 (1142)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~Ls~N~ 102 (1142)
+|++|+|++|+|+.+.+.+|..+ ++|++|+|++|.|+.+| ..|.++++|++|+|++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l---~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNL---PNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTG---TTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCC---CCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34444444444444444333322 44444444444444443 234444444444444444
No 494
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.49 E-value=8.8e-07 Score=95.62 Aligned_cols=111 Identities=23% Similarity=0.237 Sum_probs=84.9
Q ss_pred hHHHHHHHHhhCC--CCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCC-CHHHHHHHHhccCCCCCCHHHHH
Q 001142 856 SCLGEVRMLGALR--HSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGG-SVKNYIEKLSETGEKHVSVKLAL 932 (1142)
Q Consensus 856 ~~~~Ei~iL~~L~--HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~gg-SL~~~l~~~~~~~~~~ls~~~i~ 932 (1142)
++.+|...+..+. .=.+.+.+++.+..... ....++|||++++. +|.+++... ...+.....
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~----------~~~s~lite~l~~~~~L~~~~~~~-----~~~~~~~~~ 121 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGG----------GYRSYLITEALPGAQDLRDLLQQW-----EQLDPSQRR 121 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCC----------ceeEEEEEEeCCCcccHHHHHHhh-----cccchhhHH
Confidence 3468888887774 34456777776653211 14568999999974 899998762 125667788
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 933 FIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 933 ~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
.++.+++..+.-||.+||+|+|+++.|||++.+. +...+.++||+.++.
T Consensus 122 ~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~----~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 122 ELLRALARLIAKLHDAGIYHGDLNPSNILVDPDD----GQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCC----CceeEEEEcchhcee
Confidence 9999999999999999999999999999998772 235799999998753
No 495
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.48 E-value=5.1e-06 Score=97.28 Aligned_cols=223 Identities=16% Similarity=0.109 Sum_probs=143.2
Q ss_pred ceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCCccccceE
Q 001142 820 SSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQS 899 (1142)
Q Consensus 820 fG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~ 899 (1142)
..+.|++...-...++-.+++......... +. ..=+++++++.|+|||++.+++....+. ..-+
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n-k~-----t~lve~wkkl~h~NvV~frevf~t~tF~----------D~Sl 352 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTN-KD-----TSLVEAWKKLCHTNVVPFREVFLTYTFG----------DLSL 352 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcc-cc-----hHHHHHHHHhccCceeehhhhhhhhccC----------cceE
Confidence 356788887433334444444211111110 11 2457788999999999999998854322 2356
Q ss_pred EEEEeccCC-CCHHHHHHHHh----------ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 900 AIFMEYVKG-GSVKNYIEKLS----------ETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 900 ~LVmEy~~g-gSL~~~l~~~~----------~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
++|++|+|+ ++|.++.-... ...+...++..++.++.|+..||.++|+.|+.-+-|.+.+|+++.+
T Consensus 353 vlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~--- 429 (655)
T KOG3741|consen 353 VLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGK--- 429 (655)
T ss_pred EEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCc---
Confidence 999999986 36766542211 1223457889999999999999999999999999999999999876
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1048 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~ 1048 (1142)
..++|.-.|....+.... . |.+.. -++-|.-.||.+++.|.||..
T Consensus 430 ----~RIriS~C~i~Dvl~~d~----------------------~--~~le~-------~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 430 ----MRIRISGCGIMDVLQEDP----------------------T--EPLES-------QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred ----ceEEEecccceeeecCCC----------------------C--cchhH-------HhhhhHHHHHHHHHHHhhccc
Confidence 567777666543222100 0 11111 156799999999999999954
Q ss_pred C-CCCCCHHHH-HHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1049 P-YMGLSELEI-HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1049 P-f~~~~~~el-~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
- +......+. .+.|. ..++.++++++.-....++++ -++.++
T Consensus 475 ns~~~d~~~~s~~~~I~-----------------------------------~~yS~D~rn~v~yl~s~~~~~-ksI~~l 518 (655)
T KOG3741|consen 475 NSNRTDSTQSSHLTRIT-----------------------------------TTYSTDLRNVVEYLESLNFRE-KSIQDL 518 (655)
T ss_pred ccccccchHHHHHHHhh-----------------------------------hhhhHHHHHHHHHHHhcCccc-ccHHHH
Confidence 3 222222221 11111 145666778888877777776 677777
Q ss_pred HHHHHh
Q 001142 1127 YEMFVA 1132 (1142)
Q Consensus 1127 L~~L~~ 1132 (1142)
+.+...
T Consensus 519 lp~~~~ 524 (655)
T KOG3741|consen 519 LPMIGS 524 (655)
T ss_pred HHHHHH
Confidence 776544
No 496
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.45 E-value=4.8e-08 Score=117.59 Aligned_cols=163 Identities=19% Similarity=0.202 Sum_probs=112.3
Q ss_pred HHHHHHHHHHhC-CccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccch
Q 001142 937 DVAAALVELHSK-HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAP 1015 (1142)
Q Consensus 937 qIa~gL~yLHs~-gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 1015 (1142)
+++.|+.|+|.. ++||++|.|++|.++.. +.+||+.|+++........ +.........+-...-...|.||
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~-------~~wkl~Gf~f~v~~~~~~~-~p~~~yd~~lp~~~~~~~~f~ap 178 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNAN-------GDWKLAGFSFCVNANGPTE-YPFSEYDPPLPLLLQPHLNFLAP 178 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccC-------cceeeccchhhhccCCCCc-cccccCCCCCChhhccCcccccc
Confidence 345999999965 89999999999999988 7899999999876544322 11222233344455667889999
Q ss_pred hhhccccCCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCC
Q 001142 1016 EVLRAMHKPNLYGLEVDIWSYGCLLLELL-TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK 1094 (1142)
Q Consensus 1016 E~l~~~~~~~~~s~ksDVwSLGviL~ELL-tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~ 1094 (1142)
|++.. ...+.++|+||+|+++|.+. .|+.-+....... ......... ... .. ...
T Consensus 179 E~~~~----~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~-~~~~~~~~~-~~~-------------~~----~~s- 234 (700)
T KOG2137|consen 179 EYLLG----TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLL-SYSFSRNLL-NAG-------------AF----GYS- 234 (700)
T ss_pred hhhcc----ccccccccceeeeeEEEEEecCCcchhhccCCcc-hhhhhhccc-ccc-------------cc----ccc-
Confidence 99986 45679999999999999988 4655554332221 111111110 000 00 000
Q ss_pred chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1095 PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1095 ~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
-..+.++++=+.+++..++..||++.++...+++...
T Consensus 235 ----~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D~ 271 (700)
T KOG2137|consen 235 ----NNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSDP 271 (700)
T ss_pred ----ccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCCc
Confidence 1566778889999999999999999998888877654
No 497
>PRK09902 hypothetical protein; Provisional
Probab=98.38 E-value=4.9e-06 Score=89.29 Aligned_cols=148 Identities=15% Similarity=0.107 Sum_probs=100.7
Q ss_pred cccCceEEEEEEECCccEEEEEEecccCCC-C-hHHHHHhHHhHHHHHHHHhhCC--CCCccceeeeEecCCCCCCCCCC
Q 001142 816 GKSVSSSLFRCKFGSADAAAKVRTLKVCGS-S-ADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSKWLPSADGN 891 (1142)
Q Consensus 816 G~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~-~-~~~~~~~~~~~~~Ei~iL~~L~--HpNIVkl~g~~~~~~~~~~~~~~ 891 (1142)
|+|+-+.|++....+..+-+|.-....... . +-... .+.+|+..+.++. .-.+.++. ++....
T Consensus 27 ~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~p----tf~rE~~~L~~L~~~GvPVP~pv-f~~~~k-------- 93 (216)
T PRK09902 27 RRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRP----TIVREVAVIKELERAGVIVPKIV-FGEAVK-------- 93 (216)
T ss_pred CCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCch----HHHHHHHHHHHHHHcCCCCCccc-eeeeec--------
Confidence 568888899988877766666532111111 0 11222 3478999998885 23355555 322111
Q ss_pred CccccceEEEEEeccCC-CCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCC
Q 001142 892 PEHHLLQSAIFMEYVKG-GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 970 (1142)
Q Consensus 892 ~~~~~~~~~LVmEy~~g-gSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~ 970 (1142)
.....+.+||+|-++| .||.+++.+ ....+.+......++.+++..+.-||..|+.|+|+.+.||+++.++
T Consensus 94 -~~~~~rA~LVTe~L~g~~~L~~~l~~---~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g---- 165 (216)
T PRK09902 94 -IEGEWRALLVTEDMAGFISIADWYAQ---HAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG---- 165 (216)
T ss_pred -cCCceEEEEEEEeCCCCccHHHHHhc---CCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC----
Confidence 1124567999998764 489888764 2223567788889999999999999999999999999999998552
Q ss_pred CCCeEEEeecCCccc
Q 001142 971 GKPVVKLCDFDRAVP 985 (1142)
Q Consensus 971 ~~~~vKL~DFGlA~~ 985 (1142)
...+.++||.-++.
T Consensus 166 -~~~v~lIDlEk~r~ 179 (216)
T PRK09902 166 -KAEAGFLDLEKSRR 179 (216)
T ss_pred -CeeEEEEEhhccch
Confidence 15699999997753
No 498
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.38 E-value=1.8e-08 Score=98.95 Aligned_cols=86 Identities=24% Similarity=0.307 Sum_probs=67.7
Q ss_pred CCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCc
Q 001142 165 CLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNR 244 (1142)
Q Consensus 165 ~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~ 244 (1142)
.++.|+|++|.|+.+|.++..++.|+.|+++.|.|...|..|..|.+|-.|+..+|.+..||-.+.--+++-..+|.+|.
T Consensus 78 t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnep 157 (177)
T KOG4579|consen 78 TATTLNLANNEISDVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEP 157 (177)
T ss_pred hhhhhhcchhhhhhchHHHhhhHHhhhcccccCccccchHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCc
Confidence 46678888888888888888888999999999999888888888888888998889888888765544444455666776
Q ss_pred CCCCCc
Q 001142 245 LTSLGS 250 (1142)
Q Consensus 245 Ls~~~p 250 (1142)
+.+--+
T Consensus 158 l~~~~~ 163 (177)
T KOG4579|consen 158 LGDETK 163 (177)
T ss_pred ccccCc
Confidence 665544
No 499
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.35 E-value=4.7e-07 Score=105.52 Aligned_cols=136 Identities=20% Similarity=0.239 Sum_probs=70.1
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeec-CCCCccCccccCCcCCcEEEccCC-CCCcCchhhcCCC
Q 001142 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYK-NVLNLIPKSVGRYEKLRNLKFFGN-EINLFPSEVGNLL 114 (1142)
Q Consensus 37 f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~-N~Lt~iP~~l~~L~~L~~L~Ls~N-~L~~lP~~l~~L~ 114 (1142)
+..+.+++.|++++|.|+..+ ... .+|+.|.+++ +.|+.+|..+. .+|+.|+|++| .|..+|..
T Consensus 48 ~~~~~~l~~L~Is~c~L~sLP-~LP------~sLtsL~Lsnc~nLtsLP~~LP--~nLe~L~Ls~Cs~L~sLP~s----- 113 (426)
T PRK15386 48 IEEARASGRLYIKDCDIESLP-VLP------NELTEITIENCNNLTTLPGSIP--EGLEKLTVCHCPEISGLPES----- 113 (426)
T ss_pred HHHhcCCCEEEeCCCCCcccC-CCC------CCCcEEEccCCCCcccCCchhh--hhhhheEccCcccccccccc-----
Confidence 444556666666666655442 211 3466666654 45555555442 35666666665 45455432
Q ss_pred CCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC-C--CccCcccCCCCCCCE
Q 001142 115 GLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS-I--RYLPPEIGCLSNLEQ 191 (1142)
Q Consensus 115 ~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~-L--~~IP~~l~~L~~L~~ 191 (1142)
|+.|+++.|. . ..++.+|.. |+.|.+.+++ . ..+|.. -.++|++
T Consensus 114 -Le~L~L~~n~-----------------------~-~~L~~LPss------Lk~L~I~~~n~~~~~~lp~~--LPsSLk~ 160 (426)
T PRK15386 114 -VRSLEIKGSA-----------------------T-DSIKNVPNG------LTSLSINSYNPENQARIDNL--ISPSLKT 160 (426)
T ss_pred -cceEEeCCCC-----------------------C-cccccCcch------Hhheeccccccccccccccc--cCCcccE
Confidence 3333333332 1 122334433 3344443322 1 122211 1246888
Q ss_pred EEccCCCCCccchhhcCCCCCCEEEccCCC
Q 001142 192 LDLSFNKMKYLPTEICYLKALISLKVANNK 221 (1142)
Q Consensus 192 L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~ 221 (1142)
|++++|....+|..+. .+|+.|+++.|.
T Consensus 161 L~Is~c~~i~LP~~LP--~SLk~L~ls~n~ 188 (426)
T PRK15386 161 LSLTGCSNIILPEKLP--ESLQSITLHIEQ 188 (426)
T ss_pred EEecCCCcccCccccc--ccCcEEEecccc
Confidence 8888887766665554 478888888774
No 500
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.34 E-value=2.1e-06 Score=94.22 Aligned_cols=141 Identities=18% Similarity=0.188 Sum_probs=100.8
Q ss_pred ceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChH--------------HHHHhHHhHHHHHHHHhhCCCC--Cc
Q 001142 810 SSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSAD--------------EIRNFEYSCLGEVRMLGALRHS--CI 872 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~--------------~~~~~~~~~~~Ei~iL~~L~Hp--NI 872 (1142)
.++..||-|--+.||.|.. .+.++++|.-++-.++.... ...--...+++|.++|.+|.-. .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 6789999999999999998 48899999866543322110 0001122457899999999644 66
Q ss_pred cceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001142 873 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMH 952 (1142)
Q Consensus 873 Vkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvH 952 (1142)
.+.+++- .-++||||++|--|... +++......++..|+.-+..+-..||||
T Consensus 174 P~P~~~n------------------RHaVvMe~ieG~eL~~~----------r~~~en~~~il~~il~~~~~~~~~GiVH 225 (304)
T COG0478 174 PKPIAWN------------------RHAVVMEYIEGVELYRL----------RLDVENPDEILDKILEEVRKAYRRGIVH 225 (304)
T ss_pred CCccccc------------------cceeeeehcccceeecc----------cCcccCHHHHHHHHHHHHHHHHHcCccc
Confidence 6666542 22899999997555432 2234455566666676666666899999
Q ss_pred cCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 953 RDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 953 rDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
+|+.+-||+++.+ +.+.++||--+..
T Consensus 226 GDlSefNIlV~~d-------g~~~vIDwPQ~v~ 251 (304)
T COG0478 226 GDLSEFNILVTED-------GDIVVIDWPQAVP 251 (304)
T ss_pred cCCchheEEEecC-------CCEEEEeCccccc
Confidence 9999999999988 7899999987753
Done!