Query 001142
Match_columns 1142
No_of_seqs 1055 out of 4086
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 13:08:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001142.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001142hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 1.2E-50 4.3E-55 465.7 24.0 261 803-1134 20-282 (350)
2 4fih_A Serine/threonine-protei 100.0 3.1E-50 1.1E-54 461.7 23.8 257 807-1137 74-332 (346)
3 3hyh_A Carbon catabolite-derep 100.0 3.3E-49 1.1E-53 440.5 25.8 258 805-1136 11-270 (275)
4 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.1E-49 3.9E-54 450.7 22.2 262 805-1137 30-299 (311)
5 3fpq_A Serine/threonine-protei 100.0 3E-49 1E-53 444.3 25.0 259 809-1135 28-289 (290)
6 3omv_A RAF proto-oncogene seri 100.0 1.6E-48 5.5E-53 441.6 28.8 266 804-1135 33-300 (307)
7 4fie_A Serine/threonine-protei 100.0 3.8E-49 1.3E-53 463.4 24.1 257 807-1137 151-409 (423)
8 4asz_A BDNF/NT-3 growth factor 100.0 1.4E-48 5E-53 441.0 24.9 260 806-1133 12-287 (299)
9 4aoj_A High affinity nerve gro 100.0 3.4E-48 1.2E-52 443.6 27.2 263 805-1135 39-319 (329)
10 4gt4_A Tyrosine-protein kinase 100.0 2.7E-48 9.2E-53 440.6 25.8 264 803-1133 22-304 (308)
11 3ubd_A Ribosomal protein S6 ki 100.0 2.9E-49 9.9E-54 446.8 16.0 257 805-1135 22-288 (304)
12 4g3f_A NF-kappa-beta-inducing 100.0 4.5E-48 1.5E-52 442.4 21.0 254 806-1132 57-313 (336)
13 4b99_A Mitogen-activated prote 100.0 4.2E-46 1.4E-50 436.8 25.8 292 807-1134 54-350 (398)
14 4g31_A Eukaryotic translation 100.0 3.9E-46 1.3E-50 421.3 22.1 277 807-1135 5-286 (299)
15 3hmm_A TGF-beta receptor type- 100.0 8.5E-46 2.9E-50 419.4 23.7 266 808-1133 4-295 (303)
16 4ase_A Vascular endothelial gr 100.0 8.3E-46 2.8E-50 427.5 23.5 262 806-1133 63-345 (353)
17 4f9c_A Cell division cycle 7-r 100.0 3.9E-44 1.3E-48 415.3 21.5 286 807-1134 21-358 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 8.4E-44 2.9E-48 436.2 24.4 261 806-1136 156-418 (573)
19 3v5w_A G-protein coupled recep 100.0 4.9E-44 1.7E-48 438.1 21.3 262 803-1135 185-456 (689)
20 3fxz_A Serine/threonine-protei 100.0 2.6E-41 9E-46 380.2 23.7 260 806-1139 19-280 (297)
21 3fe3_A MAP/microtubule affinit 100.0 4.9E-41 1.7E-45 384.3 25.3 258 804-1135 12-271 (328)
22 3zgw_A Maternal embryonic leuc 100.0 1.5E-40 5.1E-45 383.4 24.9 257 806-1135 9-267 (347)
23 1tki_A Titin; serine kinase, m 100.0 1.8E-40 6E-45 378.2 24.3 259 806-1135 4-264 (321)
24 2yab_A Death-associated protei 100.0 1.6E-40 5.5E-45 385.2 23.8 265 807-1134 12-278 (361)
25 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.8E-40 6.3E-45 383.5 23.4 260 803-1135 19-287 (353)
26 1o6l_A RAC-beta serine/threoni 100.0 4.2E-40 1.5E-44 378.1 25.9 258 805-1135 3-267 (337)
27 3niz_A Rhodanese family protei 100.0 5.5E-40 1.9E-44 371.9 24.7 289 804-1137 18-309 (311)
28 3p86_A Serine/threonine-protei 100.0 9.6E-40 3.3E-44 369.9 26.3 262 804-1135 34-298 (309)
29 1fot_A TPK1 delta, CAMP-depend 100.0 7.5E-40 2.6E-44 372.9 25.5 256 804-1135 3-265 (318)
30 2bdw_A Hypothetical protein K1 100.0 7.9E-40 2.7E-44 379.2 25.9 260 807-1134 29-290 (362)
31 3o0g_A Cell division protein k 100.0 1.1E-39 3.9E-44 364.6 26.3 285 806-1135 1-289 (292)
32 3soa_A Calcium/calmodulin-depe 100.0 1E-39 3.4E-44 388.6 27.4 262 807-1135 11-274 (444)
33 3a62_A Ribosomal protein S6 ki 100.0 8.7E-40 3E-44 373.0 25.1 261 803-1135 13-283 (327)
34 3fdn_A Serine/threonine-protei 100.0 1.1E-39 3.8E-44 361.9 25.0 260 803-1137 5-266 (279)
35 3c0i_A Peripheral plasma membr 100.0 1.3E-39 4.3E-44 375.5 26.1 266 807-1134 24-292 (351)
36 1ob3_A PFPK5, cell division co 100.0 6.7E-40 2.3E-44 366.1 22.9 283 806-1134 1-286 (288)
37 2y0a_A Death-associated protei 100.0 8.9E-40 3E-44 372.8 24.4 263 808-1135 12-278 (326)
38 2c30_A Serine/threonine-protei 100.0 1.9E-39 6.4E-44 369.4 24.8 254 809-1136 47-302 (321)
39 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.7E-39 5.8E-44 374.9 24.7 257 803-1135 37-300 (350)
40 3kk8_A Calcium/calmodulin depe 100.0 3E-39 1E-43 358.7 25.8 265 806-1138 5-271 (284)
41 1xjd_A Protein kinase C, theta 100.0 8.5E-40 2.9E-44 376.8 22.1 259 804-1135 14-276 (345)
42 3a8x_A Protein kinase C IOTA t 100.0 3.5E-39 1.2E-43 371.4 26.4 261 802-1135 4-282 (345)
43 4agu_A Cyclin-dependent kinase 100.0 4.4E-39 1.5E-43 362.5 25.7 285 806-1135 2-291 (311)
44 3h4j_B AMPK kdaid, SNF1-like p 100.0 4.5E-40 1.5E-44 377.8 17.5 259 803-1135 5-265 (336)
45 4dc2_A Protein kinase C IOTA t 100.0 2.7E-39 9.3E-44 379.3 24.3 260 803-1135 48-325 (396)
46 3f3z_A Calcium/calmodulin-depe 100.0 4.1E-39 1.4E-43 356.7 24.4 262 807-1139 9-272 (277)
47 4eqm_A Protein kinase; transfe 100.0 9.4E-39 3.2E-43 358.6 27.6 262 807-1135 11-275 (294)
48 3v8s_A RHO-associated protein 100.0 1.4E-39 4.8E-44 383.5 21.6 265 806-1136 68-337 (410)
49 3kul_A Ephrin type-A receptor 100.0 4.9E-39 1.7E-43 366.5 25.3 264 805-1138 47-316 (325)
50 3g33_A Cell division protein k 100.0 3E-39 1E-43 364.0 23.3 291 806-1135 8-303 (308)
51 2psq_A Fibroblast growth facto 100.0 6.6E-39 2.3E-43 372.5 26.6 262 805-1133 79-362 (370)
52 2eue_A Carbon catabolite derep 100.0 3.3E-39 1.1E-43 357.4 22.8 259 804-1136 10-270 (275)
53 3tki_A Serine/threonine-protei 100.0 1.3E-39 4.5E-44 371.1 20.2 261 805-1135 5-268 (323)
54 2i0e_A Protein kinase C-beta I 100.0 5.1E-39 1.7E-43 371.5 25.3 259 803-1134 16-282 (353)
55 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.8E-39 9.7E-44 368.7 22.9 293 803-1137 30-327 (329)
56 2pmi_A Negative RE, cyclin-dep 100.0 5.2E-39 1.8E-43 364.6 24.7 289 805-1137 3-302 (317)
57 4hcu_A Tyrosine-protein kinase 100.0 5.6E-39 1.9E-43 354.4 24.4 256 806-1135 9-266 (269)
58 3dtc_A Mitogen-activated prote 100.0 4.6E-39 1.6E-43 354.8 23.5 261 805-1132 5-270 (271)
59 3llt_A Serine/threonine kinase 100.0 7.6E-39 2.6E-43 368.6 26.4 283 807-1133 35-360 (360)
60 3soc_A Activin receptor type-2 100.0 5.8E-39 2E-43 365.0 25.0 284 805-1134 22-317 (322)
61 2zv2_A Calcium/calmodulin-depe 100.0 2E-39 6.9E-44 363.7 20.7 268 804-1133 10-297 (298)
62 3is5_A Calcium-dependent prote 100.0 9.9E-39 3.4E-43 356.3 26.0 261 807-1134 22-284 (285)
63 2y7j_A Phosphorylase B kinase 100.0 1.3E-38 4.4E-43 369.2 27.9 266 807-1133 94-364 (365)
64 3lb7_A RAF proto-oncogene seri 100.0 1.5E-38 5.2E-43 359.5 27.7 269 804-1137 33-302 (307)
65 1kob_A Twitchin; kinase, intra 100.0 4E-39 1.4E-43 376.9 23.4 260 806-1135 50-311 (387)
66 3gni_B Strad alpha; kinase fol 100.0 4.8E-39 1.6E-43 375.1 23.4 296 805-1135 23-340 (389)
67 3ttj_A Mitogen-activated prote 100.0 7.9E-39 2.7E-43 383.1 25.8 284 806-1134 61-361 (464)
68 2vgo_A Serine/threonine-protei 100.0 1.1E-38 3.6E-43 355.0 24.9 261 803-1138 10-272 (284)
69 3hko_A Calcium/calmodulin-depe 100.0 6.3E-39 2.2E-43 366.5 23.5 276 807-1137 26-339 (345)
70 3oz6_A Mitogen-activated prote 100.0 6.6E-39 2.3E-43 374.0 24.0 293 806-1134 8-334 (388)
71 3ork_A Serine/threonine protei 100.0 6E-39 2E-43 362.6 22.8 267 806-1134 11-279 (311)
72 1t4h_A Serine/threonine-protei 100.0 1.4E-38 4.8E-43 355.1 25.3 257 808-1135 27-289 (290)
73 2r5t_A Serine/threonine-protei 100.0 6.6E-39 2.2E-43 373.3 23.5 260 803-1135 34-300 (373)
74 4ejn_A RAC-alpha serine/threon 100.0 3.4E-39 1.2E-43 383.8 21.5 259 804-1135 145-411 (446)
75 3kn6_A Ribosomal protein S6 ki 100.0 5.9E-39 2E-43 366.1 22.5 261 808-1140 9-282 (325)
76 2x4f_A Myosin light chain kina 100.0 1.1E-38 3.6E-43 371.3 25.0 255 810-1134 92-348 (373)
77 2a2a_A Death-associated protei 100.0 9.8E-39 3.3E-43 362.5 24.0 264 807-1135 12-279 (321)
78 4fr4_A YANK1, serine/threonine 100.0 1E-38 3.5E-43 373.0 24.8 262 803-1135 11-278 (384)
79 1ua2_A CAK, cell division prot 100.0 6.2E-39 2.1E-43 368.4 22.7 289 806-1136 9-299 (346)
80 3qd2_B Eukaryotic translation 100.0 6E-39 2E-43 363.2 22.0 279 807-1134 6-331 (332)
81 1luf_A Muscle-specific tyrosin 100.0 1.6E-38 5.5E-43 362.5 25.6 265 805-1136 45-336 (343)
82 3l9p_A Anaplastic lymphoma kin 100.0 8.7E-39 3E-43 370.9 23.6 269 803-1135 67-345 (367)
83 3kmu_A ILK, integrin-linked ki 100.0 1.7E-38 5.8E-43 349.0 24.3 261 803-1134 6-269 (271)
84 3q5i_A Protein kinase; CDPK, m 100.0 1.9E-38 6.5E-43 383.4 27.0 268 806-1136 35-309 (504)
85 4aaa_A Cyclin-dependent kinase 100.0 5E-39 1.7E-43 366.5 20.7 291 800-1135 18-313 (331)
86 1cm8_A Phosphorylated MAP kina 100.0 1.6E-38 5.5E-43 368.8 25.3 286 806-1135 24-314 (367)
87 3mtl_A Cell division protein k 100.0 5.1E-39 1.7E-43 365.8 20.5 285 806-1136 1-289 (324)
88 3lij_A Calcium/calmodulin depe 100.0 1.3E-38 4.3E-43 383.9 25.1 258 808-1134 38-297 (494)
89 2w5a_A Serine/threonine-protei 100.0 7.5E-39 2.6E-43 354.6 21.2 265 804-1135 3-274 (279)
90 3uc3_A Serine/threonine-protei 100.0 2.1E-38 7.1E-43 367.1 25.5 258 804-1135 17-281 (361)
91 3mwu_A Calmodulin-domain prote 100.0 1.2E-38 4.2E-43 383.1 24.5 263 807-1138 22-286 (486)
92 3mi9_A Cell division protein k 100.0 2E-38 6.7E-43 364.2 25.0 299 805-1136 15-319 (351)
93 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.7E-38 5.8E-43 350.0 23.5 256 806-1135 7-264 (268)
94 2w4o_A Calcium/calmodulin-depe 100.0 9.6E-39 3.3E-43 368.0 22.4 259 807-1137 53-314 (349)
95 2y94_A 5'-AMP-activated protei 100.0 1.3E-38 4.3E-43 382.2 24.1 259 804-1135 13-273 (476)
96 3rp9_A Mitogen-activated prote 100.0 2.5E-38 8.6E-43 377.3 26.1 298 806-1135 52-403 (458)
97 4aw2_A Serine/threonine-protei 100.0 1E-38 3.4E-43 379.2 22.4 268 806-1136 73-346 (437)
98 2qr7_A Ribosomal protein S6 ki 100.0 1.3E-38 4.4E-43 366.4 22.5 256 807-1134 22-283 (342)
99 3bhy_A Death-associated protei 100.0 2.7E-38 9.1E-43 350.9 24.1 263 808-1135 6-272 (283)
100 3gen_A Tyrosine-protein kinase 100.0 2.4E-38 8.3E-43 351.5 23.8 255 805-1133 22-278 (283)
101 2rku_A Serine/threonine-protei 100.0 3.6E-38 1.2E-42 352.4 25.1 260 803-1135 11-272 (294)
102 3nyv_A Calmodulin-domain prote 100.0 1.3E-38 4.4E-43 382.5 22.9 261 807-1135 26-288 (484)
103 3fme_A Dual specificity mitoge 100.0 2.6E-38 9E-43 351.8 23.5 264 806-1135 6-273 (290)
104 2vd5_A DMPK protein; serine/th 100.0 2.1E-38 7.1E-43 373.8 23.6 269 805-1137 59-336 (412)
105 4euu_A Serine/threonine-protei 100.0 4.5E-38 1.5E-42 356.4 25.4 286 807-1134 9-308 (319)
106 2h6d_A 5'-AMP-activated protei 100.0 4.2E-38 1.4E-42 348.0 24.5 259 805-1136 9-269 (276)
107 1x8b_A WEE1HU, WEE1-like prote 100.0 2.8E-38 9.5E-43 349.8 23.0 262 807-1136 11-287 (289)
108 3tt0_A Basic fibroblast growth 100.0 6.9E-38 2.4E-42 365.0 27.4 262 806-1134 68-351 (382)
109 1mp8_A Focal adhesion kinase 1 100.0 4.9E-38 1.7E-42 349.4 25.0 255 806-1133 14-274 (281)
110 1u5q_A Serine/threonine protei 100.0 5.5E-38 1.9E-42 361.8 26.1 258 808-1137 55-314 (348)
111 3cok_A Serine/threonine-protei 100.0 7.3E-39 2.5E-43 354.8 18.1 261 805-1137 9-271 (278)
112 3eb0_A Putative uncharacterize 100.0 3.5E-38 1.2E-42 367.4 24.7 295 806-1134 6-327 (383)
113 3i6u_A CDS1, serine/threonine- 100.0 8.6E-39 2.9E-43 377.7 19.7 268 807-1134 135-405 (419)
114 3q4u_A Activin receptor type-1 100.0 4.3E-38 1.5E-42 352.0 24.4 266 806-1133 7-300 (301)
115 3ugc_A Tyrosine-protein kinase 100.0 3E-38 1E-42 353.3 23.0 275 806-1133 9-289 (295)
116 2ac3_A MAP kinase-interacting 100.0 4.3E-38 1.5E-42 355.2 24.4 273 806-1136 11-303 (316)
117 2wtk_C Serine/threonine-protei 100.0 4.7E-38 1.6E-42 352.8 24.4 267 806-1137 4-272 (305)
118 3cbl_A C-FES, proto-oncogene t 100.0 2.1E-38 7.3E-43 368.8 22.3 257 806-1133 113-372 (377)
119 2jam_A Calcium/calmodulin-depe 100.0 5.6E-38 1.9E-42 352.9 24.7 259 807-1136 9-269 (304)
120 2xrw_A Mitogen-activated prote 100.0 9.7E-38 3.3E-42 362.3 27.5 284 806-1134 24-324 (371)
121 2r3i_A Cell division protein k 100.0 7.1E-38 2.4E-42 350.2 25.4 284 806-1136 2-291 (299)
122 2ivs_A Proto-oncogene tyrosine 100.0 8.4E-38 2.9E-42 351.8 26.1 261 806-1133 22-309 (314)
123 3a7i_A MST3 kinase, serine/thr 100.0 3E-38 1E-42 354.7 22.3 257 806-1137 21-279 (303)
124 3eqc_A Dual specificity mitoge 100.0 4E-38 1.4E-42 362.9 23.7 280 804-1135 30-331 (360)
125 2owb_A Serine/threonine-protei 100.0 6.5E-38 2.2E-42 358.3 25.2 260 803-1135 37-298 (335)
126 3vhe_A Vascular endothelial gr 100.0 3.4E-38 1.2E-42 362.5 22.9 263 805-1133 20-353 (359)
127 3t9t_A Tyrosine-protein kinase 100.0 8.8E-38 3E-42 343.4 25.2 256 806-1135 7-264 (267)
128 1k9a_A Carboxyl-terminal SRC k 100.0 4.7E-38 1.6E-42 374.8 24.9 254 805-1135 191-445 (450)
129 1j1b_A Glycogen synthase kinas 100.0 5.6E-38 1.9E-42 370.9 25.3 282 807-1134 54-342 (420)
130 3an0_A Dual specificity mitoge 100.0 8.6E-38 2.9E-42 357.0 25.6 268 804-1138 48-320 (340)
131 3dbq_A Dual specificity protei 100.0 5.9E-38 2E-42 359.8 24.3 260 807-1135 9-280 (343)
132 3p1a_A MYT1 kinase, membrane-a 100.0 6.6E-38 2.3E-42 354.6 24.3 251 807-1134 57-310 (311)
133 1phk_A Phosphorylase kinase; g 100.0 1.3E-37 4.6E-42 347.9 26.4 272 805-1137 15-292 (298)
134 3qup_A Tyrosine-protein kinase 100.0 6.2E-38 2.1E-42 355.3 23.8 267 805-1131 21-294 (323)
135 4e7w_A Glycogen synthase kinas 100.0 8.1E-38 2.8E-42 366.3 25.1 285 807-1135 40-328 (394)
136 3n9x_A Phosphotransferase; mal 100.0 1E-37 3.5E-42 369.9 26.2 298 806-1135 25-368 (432)
137 3poz_A Epidermal growth factor 100.0 5.3E-38 1.8E-42 357.9 22.8 257 805-1133 13-276 (327)
138 1fvr_A Tyrosine-protein kinase 100.0 8.9E-38 3E-42 355.3 24.2 269 798-1134 16-299 (327)
139 2qol_A Ephrin receptor; recept 100.0 4.8E-38 1.7E-42 365.7 22.4 259 805-1133 43-307 (373)
140 1nxk_A MAP kinase-activated pr 100.0 3E-38 1E-42 370.9 20.7 262 806-1136 60-329 (400)
141 3qyz_A Mitogen-activated prote 100.0 1.9E-37 6.4E-42 358.6 26.8 289 807-1135 27-320 (364)
142 2i6l_A Mitogen-activated prote 100.0 2.4E-37 8.1E-42 348.3 26.8 300 807-1137 11-314 (320)
143 3com_A Serine/threonine-protei 100.0 1.1E-37 3.9E-42 351.4 24.1 260 804-1137 26-287 (314)
144 2nru_A Interleukin-1 receptor- 100.0 8.2E-38 2.8E-42 351.5 22.9 270 809-1135 33-306 (307)
145 1vzo_A Ribosomal protein S6 ki 100.0 2.6E-38 9E-43 365.1 19.3 264 803-1135 50-328 (355)
146 2fst_X Mitogen-activated prote 100.0 5.2E-38 1.8E-42 364.8 21.9 285 807-1135 29-318 (367)
147 2acx_A G protein-coupled recep 100.0 5.9E-38 2E-42 382.7 23.4 260 803-1134 180-450 (576)
148 3kvw_A DYRK2, dual specificity 100.0 1E-37 3.5E-42 369.7 24.7 283 807-1138 97-418 (429)
149 2x7f_A TRAF2 and NCK-interacti 100.0 9.8E-38 3.4E-42 353.8 23.5 269 805-1136 22-294 (326)
150 1p4o_A Insulin-like growth fac 100.0 2.8E-37 9.6E-42 349.5 27.2 262 806-1134 24-298 (322)
151 1qcf_A Haematopoetic cell kina 100.0 9.9E-38 3.4E-42 372.3 24.7 256 806-1135 187-444 (454)
152 3pfq_A PKC-B, PKC-beta, protei 100.0 5.2E-38 1.8E-42 392.3 23.2 260 803-1135 337-604 (674)
153 3cc6_A Protein tyrosine kinase 100.0 1.4E-37 4.7E-42 345.5 24.0 256 805-1133 10-271 (281)
154 4fvq_A Tyrosine-protein kinase 100.0 6E-38 2.1E-42 349.1 21.1 263 805-1139 6-279 (289)
155 1u59_A Tyrosine-protein kinase 100.0 2.1E-37 7.1E-42 345.4 25.3 258 806-1134 8-271 (287)
156 3kex_A Receptor tyrosine-prote 100.0 8.1E-38 2.8E-42 355.8 22.3 259 804-1134 10-275 (325)
157 4f0f_A Serine/threonine-protei 100.0 2E-37 6.8E-42 344.9 24.9 267 801-1132 13-286 (287)
158 3og7_A AKAP9-BRAF fusion prote 100.0 1.3E-37 4.5E-42 347.6 23.3 263 806-1133 23-286 (289)
159 2eva_A TAK1 kinase - TAB1 chim 100.0 1.4E-37 4.8E-42 351.2 23.7 253 803-1133 4-261 (307)
160 2ycf_A Serine/threonine-protei 100.0 5.2E-38 1.8E-42 356.4 20.3 268 807-1134 10-280 (322)
161 2zmd_A Dual specificity protei 100.0 1.3E-37 4.5E-42 364.1 24.1 260 807-1135 56-327 (390)
162 2j7t_A Serine/threonine-protei 100.0 6.6E-38 2.3E-42 351.0 20.6 263 806-1136 18-283 (302)
163 1mqb_A Ephrin type-A receptor 100.0 4.3E-37 1.5E-41 351.4 27.7 260 804-1133 41-307 (333)
164 2izr_A Casein kinase I isoform 100.0 3E-37 1E-41 351.7 26.1 263 807-1131 9-277 (330)
165 3e3p_A Protein kinase, putativ 100.0 3E-37 1E-41 354.7 26.3 293 804-1135 20-321 (360)
166 3s95_A LIMK-1, LIM domain kina 100.0 3.7E-37 1.3E-41 347.3 26.5 267 805-1133 8-280 (310)
167 2b9h_A MAP kinase FUS3, mitoge 100.0 2.7E-37 9.3E-42 354.1 25.6 297 806-1135 10-312 (353)
168 3nsz_A CK II alpha, casein kin 100.0 3.1E-37 1.1E-41 350.3 25.6 277 804-1135 33-326 (330)
169 3kfa_A Tyrosine-protein kinase 100.0 1.2E-37 4.2E-42 346.4 21.7 254 806-1132 12-268 (288)
170 3lzb_A Epidermal growth factor 100.0 2E-37 6.9E-42 353.5 23.9 261 804-1134 12-277 (327)
171 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.6E-37 5.4E-42 377.5 24.3 263 803-1134 181-454 (543)
172 1rjb_A FL cytokine receptor; k 100.0 1.1E-37 3.9E-42 356.3 21.7 264 805-1135 43-334 (344)
173 1opk_A P150, C-ABL, proto-onco 100.0 1.8E-37 6.2E-42 374.2 24.6 256 806-1134 219-477 (495)
174 2yex_A Serine/threonine-protei 100.0 6.7E-38 2.3E-42 346.0 19.1 262 807-1138 7-271 (276)
175 1t46_A HOMO sapiens V-KIT hard 100.0 2.3E-37 7.9E-42 348.0 23.8 263 806-1135 22-307 (313)
176 3lm5_A Serine/threonine-protei 100.0 5.4E-38 1.9E-42 357.8 18.9 261 809-1135 30-294 (327)
177 1byg_A CSK, protein (C-termina 100.0 9E-38 3.1E-42 346.4 19.8 253 804-1133 18-271 (278)
178 3f66_A Hepatocyte growth facto 100.0 3.4E-37 1.2E-41 344.9 24.6 263 807-1135 25-291 (298)
179 3brb_A Proto-oncogene tyrosine 100.0 4.3E-37 1.5E-41 346.8 25.4 267 806-1133 33-306 (313)
180 1csn_A Casein kinase-1; phosph 100.0 7.6E-37 2.6E-41 341.4 27.1 266 807-1133 10-281 (298)
181 3dls_A PAS domain-containing s 100.0 4E-38 1.4E-42 360.8 17.1 251 807-1135 24-281 (335)
182 2pvf_A Fibroblast growth facto 100.0 4.8E-37 1.7E-41 350.5 25.9 261 806-1133 34-316 (334)
183 1z57_A Dual specificity protei 100.0 3.6E-37 1.2E-41 349.2 24.5 285 806-1134 13-334 (339)
184 4exu_A Mitogen-activated prote 100.0 3.4E-37 1.1E-41 357.8 24.7 283 807-1134 42-329 (371)
185 1xbb_A Tyrosine-protein kinase 100.0 4.8E-37 1.7E-41 343.1 25.0 256 806-1132 15-276 (291)
186 2qkw_B Protein kinase; three-h 100.0 3E-38 1E-42 358.2 15.5 270 805-1134 37-314 (321)
187 3pg1_A Mitogen-activated prote 100.0 3.9E-37 1.3E-41 354.7 25.0 294 807-1135 22-323 (362)
188 2wqm_A Serine/threonine-protei 100.0 4.7E-37 1.6E-41 346.1 24.9 267 802-1135 27-297 (310)
189 2wei_A Calmodulin-domain prote 100.0 2.6E-37 8.8E-42 344.7 22.2 261 807-1136 22-284 (287)
190 3uim_A Brassinosteroid insensi 100.0 2E-37 7E-42 351.5 21.3 274 806-1135 29-311 (326)
191 2yfx_A Tyrosine-protein kinase 100.0 3.8E-37 1.3E-41 350.0 23.5 271 800-1134 23-303 (327)
192 3byv_A Rhoptry kinase; malaria 100.0 1.2E-38 4E-43 370.7 11.2 270 806-1134 72-365 (377)
193 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.8E-37 1.3E-41 367.2 24.4 256 806-1135 183-440 (452)
194 2vwi_A Serine/threonine-protei 100.0 8.3E-38 2.8E-42 349.7 17.6 277 805-1135 13-294 (303)
195 3mdy_A Bone morphogenetic prot 100.0 1.3E-36 4.5E-41 345.5 27.6 267 807-1135 37-331 (337)
196 4e5w_A Tyrosine-protein kinase 100.0 6.6E-37 2.3E-41 342.9 24.0 279 801-1132 13-299 (302)
197 1qpc_A LCK kinase; alpha beta 100.0 5.3E-37 1.8E-41 340.1 22.9 253 806-1132 12-266 (279)
198 3lxl_A Tyrosine-protein kinase 100.0 4.7E-37 1.6E-41 349.3 23.0 275 806-1135 22-303 (327)
199 3rgf_A Cyclin-dependent kinase 100.0 4.5E-37 1.5E-41 360.7 23.4 291 809-1136 22-341 (405)
200 2i1m_A Macrophage colony-stimu 100.0 6.3E-37 2.2E-41 348.5 23.9 262 805-1133 44-324 (333)
201 2clq_A Mitogen-activated prote 100.0 4.7E-37 1.6E-41 342.6 22.2 264 804-1137 19-287 (295)
202 3c1x_A Hepatocyte growth facto 100.0 3.3E-37 1.1E-41 358.8 21.8 262 808-1135 90-355 (373)
203 1wak_A Serine/threonine-protei 100.0 7.3E-37 2.5E-41 355.2 23.9 284 806-1133 36-396 (397)
204 2a19_B Interferon-induced, dou 100.0 9.2E-37 3.1E-41 338.0 23.6 262 807-1137 11-276 (284)
205 2xir_A Vascular endothelial gr 100.0 5.8E-37 2E-41 345.2 22.2 262 806-1133 26-308 (316)
206 1blx_A Cyclin-dependent kinase 100.0 9E-37 3.1E-41 345.6 23.8 286 807-1135 11-303 (326)
207 3pls_A Macrophage-stimulating 100.0 2.5E-36 8.4E-41 337.3 26.7 259 808-1134 22-286 (298)
208 3g2f_A Bone morphogenetic prot 100.0 1.2E-36 4.1E-41 346.3 24.2 295 802-1135 8-318 (336)
209 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-36 3.6E-41 345.5 23.6 270 809-1133 33-308 (318)
210 1zy4_A Serine/threonine-protei 100.0 1.6E-36 5.6E-41 338.3 23.8 278 807-1135 6-290 (303)
211 2pml_X PFPK7, Ser/Thr protein 100.0 1.4E-37 4.9E-42 355.7 15.5 283 805-1135 29-329 (348)
212 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.3E-37 7.8E-42 349.4 16.9 269 803-1135 29-302 (319)
213 3coi_A Mitogen-activated prote 100.0 7.6E-37 2.6E-41 351.6 21.5 283 807-1135 24-312 (353)
214 3op5_A Serine/threonine-protei 100.0 7.4E-37 2.5E-41 353.6 21.4 281 806-1132 34-326 (364)
215 1u46_A ACK-1, activated CDC42 100.0 1E-36 3.6E-41 339.1 21.6 263 806-1136 17-285 (291)
216 2vx3_A Dual specificity tyrosi 100.0 1.9E-36 6.5E-41 352.7 24.3 281 806-1135 53-379 (382)
217 1b6c_B TGF-B superfamily recep 100.0 3.5E-36 1.2E-40 343.0 26.1 266 807-1134 42-335 (342)
218 2h8h_A Proto-oncogene tyrosine 100.0 1.2E-36 4.1E-41 370.5 23.5 256 806-1135 266-523 (535)
219 2h34_A Serine/threonine-protei 100.0 1.6E-36 5.6E-41 342.6 22.7 264 803-1135 30-296 (309)
220 2eu9_A Dual specificity protei 100.0 2.2E-36 7.6E-41 345.4 24.0 284 806-1135 18-340 (355)
221 3gxj_A TGF-beta receptor type- 100.0 2.5E-38 8.6E-43 353.9 5.9 267 807-1135 3-297 (303)
222 4hgt_A Casein kinase I isoform 100.0 5.3E-36 1.8E-40 333.9 24.5 263 806-1133 8-278 (296)
223 3uzp_A CKI-delta, CKID, casein 100.0 4.2E-36 1.4E-40 335.0 23.3 263 806-1133 8-278 (296)
224 3aln_A Dual specificity mitoge 100.0 9.3E-37 3.2E-41 346.6 18.2 268 804-1134 19-291 (327)
225 2ozo_A Tyrosine-protein kinase 100.0 6.7E-36 2.3E-40 369.6 27.4 254 807-1131 335-594 (613)
226 1q8y_A SR protein kinase; tran 100.0 4E-36 1.4E-40 346.7 23.6 287 805-1135 17-340 (373)
227 3cek_A Dual specificity protei 100.0 4.3E-36 1.5E-40 339.0 23.2 262 807-1137 28-301 (313)
228 4eut_A Serine/threonine-protei 100.0 2.8E-36 9.6E-41 353.3 22.4 290 807-1134 9-308 (396)
229 4fl3_A Tyrosine-protein kinase 100.0 4.2E-36 1.4E-40 372.7 25.0 249 813-1132 375-628 (635)
230 3ll6_A Cyclin G-associated kin 100.0 4E-36 1.4E-40 340.8 22.4 272 808-1134 29-307 (337)
231 2dyl_A Dual specificity mitoge 100.0 4.4E-36 1.5E-40 338.4 21.4 263 804-1134 22-289 (318)
232 2v62_A Serine/threonine-protei 100.0 2.2E-36 7.5E-41 347.1 18.8 280 806-1134 36-327 (345)
233 2jii_A Serine/threonine-protei 100.0 4E-36 1.4E-40 345.7 20.9 265 806-1133 41-334 (352)
234 2buj_A Serine/threonine-protei 100.0 9.3E-36 3.2E-40 336.2 23.1 277 806-1137 28-308 (317)
235 2w1i_A JAK2; chromosomal rearr 100.0 1.3E-35 4.4E-40 337.6 23.7 274 806-1133 40-320 (326)
236 3q60_A ROP5B; pseudokinase, tr 100.0 2.4E-36 8.3E-41 350.2 17.8 277 807-1134 62-358 (371)
237 3fhr_A MAP kinase-activated pr 100.0 2.2E-36 7.5E-41 346.2 17.0 264 806-1135 27-294 (336)
238 2iwi_A Serine/threonine-protei 100.0 5.5E-36 1.9E-40 337.6 19.2 253 806-1135 30-290 (312)
239 3a99_A Proto-oncogene serine/t 100.0 3.2E-36 1.1E-40 342.1 17.2 251 806-1135 42-300 (320)
240 2j0j_A Focal adhesion kinase 1 100.0 2.9E-35 9.8E-40 366.5 27.3 257 806-1133 389-649 (656)
241 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.1E-35 3.6E-40 343.8 19.9 256 806-1130 64-334 (365)
242 3p23_A Serine/threonine-protei 100.0 9.2E-36 3.1E-40 353.4 17.7 262 808-1134 25-289 (432)
243 3sv0_A Casein kinase I-like; t 100.0 1.7E-34 5.7E-39 347.1 26.5 261 806-1132 6-275 (483)
244 2rio_A Serine/threonine-protei 100.0 3.8E-35 1.3E-39 348.1 20.2 270 809-1133 17-300 (434)
245 3m2w_A MAP kinase-activated pr 100.0 2.6E-34 8.9E-39 322.8 19.8 245 806-1137 16-265 (299)
246 2vuw_A Serine/threonine-protei 100.0 2.8E-35 9.4E-40 336.3 7.4 270 806-1133 19-336 (336)
247 3qa8_A MGC80376 protein; kinas 100.0 8.9E-35 3.1E-39 358.5 11.8 290 803-1134 10-303 (676)
248 3dzo_A Rhoptry kinase domain; 100.0 1.7E-34 5.9E-39 340.3 13.0 270 806-1134 77-369 (413)
249 3uqc_A Probable conserved tran 100.0 8.6E-33 2.9E-37 309.8 18.6 230 807-1135 31-265 (286)
250 2pzi_A Probable serine/threoni 100.0 1.4E-32 4.7E-37 344.2 19.1 242 807-1132 80-324 (681)
251 3rgz_A Protein brassinosteroid 100.0 8.3E-32 2.8E-36 341.5 22.8 296 18-326 369-743 (768)
252 3rgz_A Protein brassinosteroid 100.0 1.2E-30 4E-35 331.0 22.4 274 16-297 393-742 (768)
253 2z66_A Variable lymphocyte rec 100.0 1.3E-29 4.5E-34 285.2 18.7 271 20-299 10-290 (306)
254 1xku_A Decorin; proteoglycan, 100.0 1.9E-28 6.4E-33 279.0 27.7 245 17-272 52-308 (330)
255 1ogq_A PGIP-2, polygalacturona 100.0 6.1E-30 2.1E-34 290.2 12.6 229 41-278 50-287 (313)
256 3v47_A TOLL-like receptor 5B a 100.0 2.1E-28 7.3E-33 290.0 26.0 253 16-271 29-385 (455)
257 3zyj_A Leucine-rich repeat-con 100.0 3.8E-28 1.3E-32 288.0 27.5 255 19-283 45-305 (440)
258 4g8a_A TOLL-like receptor 4; l 100.0 2.6E-28 9E-33 299.5 26.6 131 16-149 51-185 (635)
259 2ft3_A Biglycan; proteoglycan, 100.0 2.5E-28 8.6E-33 278.4 23.3 241 18-270 55-307 (332)
260 3zyi_A Leucine-rich repeat-con 100.0 8.4E-28 2.9E-32 286.0 25.9 254 19-282 56-315 (452)
261 1ogq_A PGIP-2, polygalacturona 100.0 1.1E-28 3.6E-33 280.0 16.5 247 17-271 50-305 (313)
262 2id5_A Lingo-1, leucine rich r 100.0 4.2E-28 1.4E-32 289.9 22.2 256 17-275 56-338 (477)
263 2id5_A Lingo-1, leucine rich r 100.0 9.2E-28 3.1E-32 286.9 24.8 272 16-293 31-313 (477)
264 4fcg_A Uncharacterized protein 100.0 5.9E-28 2E-32 275.9 20.9 224 40-271 80-315 (328)
265 3o6n_A APL1; leucine-rich repe 100.0 2.3E-27 7.9E-32 276.2 24.0 246 17-271 69-332 (390)
266 4eco_A Uncharacterized protein 99.9 5.7E-28 2E-32 300.0 17.7 251 15-271 247-527 (636)
267 4eco_A Uncharacterized protein 99.9 7.5E-28 2.6E-32 298.9 18.8 240 16-264 272-543 (636)
268 1xku_A Decorin; proteoglycan, 99.9 1.7E-26 5.8E-31 262.8 28.1 242 18-271 32-277 (330)
269 4ecn_A Leucine-rich repeat pro 99.9 1.1E-27 3.9E-32 305.1 20.1 246 15-266 489-785 (876)
270 4ecn_A Leucine-rich repeat pro 99.9 2.3E-27 7.9E-32 302.3 22.9 262 17-290 548-841 (876)
271 3oja_B Anopheles plasmodium-re 99.9 3.6E-27 1.2E-31 290.6 23.0 246 17-271 75-338 (597)
272 3t6q_A CD180 antigen; protein- 99.9 1E-26 3.5E-31 285.9 26.9 250 16-271 32-339 (606)
273 4fcg_A Uncharacterized protein 99.9 2.3E-27 7.9E-32 271.0 19.4 212 68-284 81-302 (328)
274 2ft3_A Biglycan; proteoglycan, 99.9 9.9E-27 3.4E-31 265.2 23.9 241 18-271 34-278 (332)
275 2z80_A TOLL-like receptor 2, v 99.9 1E-27 3.4E-32 275.7 15.3 245 22-274 36-318 (353)
276 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 9.5E-27 3.3E-31 284.4 24.8 126 17-149 52-181 (562)
277 2z7x_B TOLL-like receptor 1, v 99.9 5E-27 1.7E-31 283.4 21.6 126 17-149 21-150 (520)
278 2z7x_B TOLL-like receptor 1, v 99.9 5.8E-27 2E-31 282.9 21.8 82 17-104 45-128 (520)
279 3o6n_A APL1; leucine-rich repe 99.9 5.9E-27 2E-31 272.8 21.0 265 17-291 45-333 (390)
280 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 9.7E-27 3.3E-31 284.3 23.4 83 16-104 75-159 (562)
281 3vq2_A TLR4, TOLL-like recepto 99.9 1.3E-26 4.5E-31 284.8 23.4 252 17-271 32-438 (606)
282 3t6q_A CD180 antigen; protein- 99.9 7E-27 2.4E-31 287.3 20.8 247 17-271 278-537 (606)
283 1ozn_A Reticulon 4 receptor; N 99.9 1.8E-26 6.1E-31 257.2 21.7 230 44-282 14-250 (285)
284 3oja_B Anopheles plasmodium-re 99.9 8.3E-27 2.8E-31 287.3 20.1 265 18-292 52-340 (597)
285 3j0a_A TOLL-like receptor 5; m 99.9 5.3E-27 1.8E-31 300.4 18.5 261 17-288 266-578 (844)
286 1ziw_A TOLL-like receptor 3; i 99.9 3.4E-26 1.2E-30 285.3 25.0 253 17-271 329-598 (680)
287 3vq2_A TLR4, TOLL-like recepto 99.9 1.6E-26 5.4E-31 284.2 21.1 258 18-282 286-570 (606)
288 2z81_A CD282 antigen, TOLL-lik 99.9 2E-26 6.7E-31 279.7 20.6 131 161-294 331-491 (549)
289 4azs_A Methyltransferase WBDD; 99.9 6.7E-28 2.3E-32 295.2 6.0 193 811-1047 238-435 (569)
290 4fmz_A Internalin; leucine ric 99.9 2.7E-25 9.3E-30 254.0 27.1 237 16-271 65-301 (347)
291 2z63_A TOLL-like receptor 4, v 99.9 1E-25 3.4E-30 274.3 24.3 130 17-149 28-161 (570)
292 3v47_A TOLL-like receptor 5B a 99.9 1.5E-25 5.3E-30 265.4 25.0 241 21-271 14-361 (455)
293 3bz5_A Internalin-J, INLJ; leu 99.9 4.3E-25 1.5E-29 263.7 28.5 227 17-271 42-268 (457)
294 3j0a_A TOLL-like receptor 5; m 99.9 1.2E-25 4.2E-30 287.8 24.6 272 15-289 22-394 (844)
295 4fmz_A Internalin; leucine ric 99.9 6.7E-25 2.3E-29 250.8 27.6 254 17-289 44-300 (347)
296 2z81_A CD282 antigen, TOLL-lik 99.9 1.5E-26 5.2E-31 280.7 14.6 154 17-176 26-184 (549)
297 2z63_A TOLL-like receptor 4, v 99.9 1.5E-25 5.1E-30 272.8 22.9 251 17-271 52-484 (570)
298 1ziw_A TOLL-like receptor 3; i 99.9 1.2E-24 4.1E-29 271.2 29.2 276 18-296 223-556 (680)
299 1wwl_A Monocyte differentiatio 99.9 6.9E-27 2.4E-31 264.7 6.9 245 18-271 44-310 (312)
300 1o6v_A Internalin A; bacterial 99.9 1.1E-24 3.8E-29 260.1 26.1 237 16-271 67-323 (466)
301 3o53_A Protein LRIM1, AGAP0063 99.9 2.5E-26 8.6E-31 260.6 11.1 238 19-271 12-251 (317)
302 3bz5_A Internalin-J, INLJ; leu 99.9 2.7E-24 9.2E-29 256.8 29.1 184 17-225 64-248 (457)
303 2z66_A Variable lymphocyte rec 99.9 4.2E-25 1.4E-29 248.4 20.5 219 43-271 9-237 (306)
304 3oja_A Leucine-rich immune mol 99.9 2.7E-26 9.1E-31 276.2 11.3 219 38-271 31-251 (487)
305 1o6v_A Internalin A; bacterial 99.9 1.5E-24 5.2E-29 258.9 26.3 254 18-290 47-323 (466)
306 2z62_A TOLL-like receptor 4, v 99.9 4.5E-25 1.5E-29 244.7 19.8 208 69-279 29-246 (276)
307 3o53_A Protein LRIM1, AGAP0063 99.9 1.1E-26 3.8E-31 263.5 6.0 241 16-271 33-277 (317)
308 2z80_A TOLL-like receptor 2, v 99.9 8.1E-26 2.8E-30 259.8 12.3 228 17-250 52-318 (353)
309 1ozn_A Reticulon 4 receptor; N 99.9 4.7E-25 1.6E-29 245.7 17.3 249 20-280 14-269 (285)
310 3zyj_A Leucine-rich repeat-con 99.9 3.3E-24 1.1E-28 254.2 25.1 220 42-271 44-269 (440)
311 3oja_A Leucine-rich immune mol 99.9 1.9E-25 6.4E-30 268.9 14.6 240 11-265 28-270 (487)
312 3zyi_A Leucine-rich repeat-con 99.9 1.9E-24 6.3E-29 257.1 22.8 224 16-247 74-304 (452)
313 1wwl_A Monocyte differentiatio 99.9 1.5E-25 5.2E-30 253.7 11.6 226 19-248 65-311 (312)
314 1jl5_A Outer protein YOPM; leu 99.9 5.9E-24 2E-28 253.6 23.7 234 17-281 131-381 (454)
315 2o6q_A Variable lymphocyte rec 99.9 1.1E-23 3.9E-28 233.2 23.6 201 42-274 17-222 (270)
316 3g06_A SSPH2 (leucine-rich rep 99.9 1.9E-23 6.4E-28 258.0 26.6 214 18-271 62-275 (622)
317 3g06_A SSPH2 (leucine-rich rep 99.9 2.1E-23 7.3E-28 257.5 26.6 227 15-280 79-305 (622)
318 1p9a_G Platelet glycoprotein I 99.9 7E-24 2.4E-28 238.0 20.3 211 37-282 6-220 (290)
319 4g8a_A TOLL-like receptor 4; l 99.9 2.8E-23 9.5E-28 254.9 26.1 147 23-177 37-186 (635)
320 1jl5_A Outer protein YOPM; leu 99.9 1.3E-22 4.5E-27 241.9 27.3 218 20-271 74-291 (454)
321 1p9a_G Platelet glycoprotein I 99.9 4.9E-23 1.7E-27 231.2 21.2 197 18-247 11-209 (290)
322 2z62_A TOLL-like receptor 4, v 99.9 5.9E-23 2E-27 227.6 19.9 221 22-250 12-241 (276)
323 1h6u_A Internalin H; cell adhe 99.9 3.9E-23 1.3E-27 233.7 18.4 195 37-271 37-231 (308)
324 3en9_A Glycoprotease, O-sialog 99.9 3.2E-24 1.1E-28 261.1 8.7 201 810-1051 339-539 (540)
325 4glp_A Monocyte differentiatio 99.9 4.6E-23 1.6E-27 232.9 13.8 228 40-271 63-308 (310)
326 2o6q_A Variable lymphocyte rec 99.9 8E-22 2.8E-26 218.3 23.4 200 18-249 17-221 (270)
327 1h6u_A Internalin H; cell adhe 99.9 7.8E-23 2.7E-27 231.3 15.2 194 17-250 41-234 (308)
328 3m19_A Variable lymphocyte rec 99.9 1.1E-21 3.7E-26 214.8 20.7 180 69-276 15-199 (251)
329 2ca6_A RAN GTPase-activating p 99.9 1E-23 3.4E-28 245.4 3.1 237 35-271 26-317 (386)
330 2xwt_C Thyrotropin receptor; s 99.9 7E-22 2.4E-26 214.5 17.1 193 42-268 32-237 (239)
331 4glp_A Monocyte differentiatio 99.9 2.9E-22 1E-26 226.3 14.6 203 40-247 90-308 (310)
332 3rfs_A Internalin B, repeat mo 99.9 3.3E-22 1.1E-26 221.8 13.8 197 68-278 41-241 (272)
333 3rfs_A Internalin B, repeat mo 99.9 6.9E-22 2.3E-26 219.2 15.9 214 68-289 19-235 (272)
334 2xwt_C Thyrotropin receptor; s 99.9 1.2E-21 3.9E-26 212.7 17.1 180 69-278 32-223 (239)
335 3cvr_A Invasion plasmid antige 99.9 1.1E-21 3.7E-26 239.7 17.3 178 42-271 60-244 (571)
336 3cvr_A Invasion plasmid antige 99.9 4.9E-21 1.7E-25 233.9 18.6 181 92-300 60-247 (571)
337 2ca6_A RAN GTPase-activating p 99.8 3.8E-22 1.3E-26 232.1 4.4 235 16-250 31-320 (386)
338 3goz_A Leucine-rich repeat-con 99.8 5.5E-22 1.9E-26 229.1 5.1 246 23-271 4-298 (362)
339 4ay9_X Follicle-stimulating ho 99.8 2.6E-20 9E-25 214.1 18.0 234 21-267 13-256 (350)
340 3m19_A Variable lymphocyte rec 99.8 7.7E-20 2.6E-24 200.1 19.8 175 42-248 15-194 (251)
341 2ast_B S-phase kinase-associat 99.8 1.3E-21 4.3E-26 222.4 5.1 241 18-271 48-307 (336)
342 1z7x_W Ribonuclease inhibitor; 99.8 2.4E-22 8.2E-27 238.2 -1.7 252 17-271 56-355 (461)
343 1h6t_A Internalin B; cell adhe 99.8 1.6E-20 5.3E-25 210.8 12.2 169 68-247 46-214 (291)
344 4ay9_X Follicle-stimulating ho 99.8 1.7E-20 5.7E-25 215.8 12.2 219 44-277 12-241 (350)
345 2xot_A Amphoterin-induced prot 99.8 2.7E-20 9.4E-25 215.0 12.5 180 71-278 21-210 (361)
346 3goz_A Leucine-rich repeat-con 99.8 6.9E-21 2.4E-25 219.9 7.3 224 45-271 2-267 (362)
347 1z7x_W Ribonuclease inhibitor; 99.8 6.8E-22 2.3E-26 234.3 -2.5 251 18-271 29-327 (461)
348 1h6t_A Internalin B; cell adhe 99.8 1E-19 3.6E-24 204.1 15.2 191 68-271 24-214 (291)
349 1m9s_A Internalin B; cell inva 99.8 9.3E-20 3.2E-24 224.6 14.3 172 68-250 43-214 (605)
350 2v70_A SLIT-2, SLIT homolog 2 99.8 3.3E-19 1.1E-23 191.8 14.8 123 160-282 53-178 (220)
351 2ast_B S-phase kinase-associat 99.8 2.8E-20 9.5E-25 211.3 6.2 231 17-255 70-315 (336)
352 1zar_A RIO2 kinase; serine kin 99.8 9.9E-20 3.4E-24 203.6 10.1 151 809-1020 92-253 (282)
353 1m9s_A Internalin B; cell inva 99.8 3.7E-19 1.3E-23 219.3 13.7 189 22-227 26-214 (605)
354 2v9t_B SLIT homolog 2 protein 99.8 8.7E-19 3E-23 188.5 14.7 123 159-281 51-176 (220)
355 3e6j_A Variable lymphocyte rec 99.8 2E-18 7E-23 186.7 17.5 116 159-274 59-176 (229)
356 1dce_A Protein (RAB geranylger 99.8 1.5E-21 5.2E-26 238.9 -8.9 195 56-271 337-547 (567)
357 1xeu_A Internalin C; cellular 99.8 8.3E-19 2.9E-23 193.9 12.1 168 68-271 19-186 (263)
358 2o6s_A Variable lymphocyte rec 99.8 2.4E-18 8.2E-23 182.5 15.0 102 163-271 75-179 (208)
359 1xeu_A Internalin C; cellular 99.8 4.2E-19 1.4E-23 196.3 9.4 173 39-250 17-189 (263)
360 2o6s_A Variable lymphocyte rec 99.8 5.9E-18 2E-22 179.5 15.5 177 44-258 10-190 (208)
361 3e6j_A Variable lymphocyte rec 99.7 2E-17 6.8E-22 178.9 17.7 153 70-250 21-176 (229)
362 4b8c_D Glucose-repressible alc 99.7 5.2E-19 1.8E-23 222.6 5.7 178 41-223 173-354 (727)
363 4ezg_A Putative uncharacterize 99.7 9.6E-18 3.3E-22 176.8 13.0 152 88-271 41-195 (197)
364 1dce_A Protein (RAB geranylger 99.7 5.6E-20 1.9E-24 225.1 -6.0 203 37-264 345-567 (567)
365 2xot_A Amphoterin-induced prot 99.7 1.5E-17 5.2E-22 192.0 14.6 173 43-247 20-203 (361)
366 2v9t_B SLIT homolog 2 protein 99.7 3.7E-17 1.3E-21 175.7 15.6 149 71-247 14-166 (220)
367 4ezg_A Putative uncharacterize 99.7 2.5E-17 8.7E-22 173.5 13.9 150 68-247 44-195 (197)
368 2v70_A SLIT-2, SLIT homolog 2 99.7 7E-17 2.4E-21 173.6 16.1 150 72-249 15-169 (220)
369 1zth_A RIO1 serine protein kin 99.7 2.4E-17 8.1E-22 181.7 11.3 142 809-985 49-218 (258)
370 4b8c_D Glucose-repressible alc 99.7 3.4E-18 1.2E-22 215.3 4.1 179 68-250 173-358 (727)
371 3ogk_B Coronatine-insensitive 99.6 4.9E-17 1.7E-21 198.8 5.5 253 17-269 192-500 (592)
372 1w8a_A SLIT protein; signaling 99.6 4.3E-16 1.5E-20 163.8 11.8 136 140-281 11-150 (192)
373 2wfh_A SLIT homolog 2 protein 99.6 7.3E-16 2.5E-20 162.4 13.6 139 140-284 13-153 (193)
374 3sb4_A Hypothetical leucine ri 99.6 8.3E-16 2.9E-20 175.0 12.9 222 40-264 48-328 (329)
375 2ell_A Acidic leucine-rich nuc 99.6 2.2E-15 7.4E-20 154.2 11.4 134 68-228 24-165 (168)
376 2ell_A Acidic leucine-rich nuc 99.6 2.1E-15 7E-20 154.4 10.8 132 137-271 24-161 (168)
377 3ogk_B Coronatine-insensitive 99.6 1.6E-16 5.6E-21 194.1 1.3 246 18-271 139-421 (592)
378 4fdw_A Leucine rich hypothetic 99.6 4.8E-14 1.6E-18 165.4 20.8 229 27-271 122-359 (401)
379 2wfh_A SLIT homolog 2 protein 99.6 1.9E-14 6.6E-19 151.5 14.4 53 71-125 13-65 (193)
380 4gyi_A RIO2 kinase; protein ki 99.6 4.6E-15 1.6E-19 171.9 10.0 150 809-985 97-264 (397)
381 2je0_A Acidic leucine-rich nuc 99.5 6.1E-15 2.1E-19 147.8 8.9 127 137-266 17-149 (149)
382 1w8a_A SLIT protein; signaling 99.5 6.4E-15 2.2E-19 154.8 9.4 125 71-223 11-139 (192)
383 4fdw_A Leucine rich hypothetic 99.5 1.2E-13 3.9E-18 162.1 20.2 239 18-271 136-384 (401)
384 2o6r_A Variable lymphocyte rec 99.5 7E-14 2.4E-18 144.3 14.7 110 164-273 28-140 (177)
385 1a9n_A U2A', U2A'; complex (nu 99.5 1.6E-14 5.6E-19 149.2 8.7 103 166-269 44-152 (176)
386 1a9n_A U2A', U2A'; complex (nu 99.5 2.5E-14 8.7E-19 147.7 9.5 134 109-247 14-154 (176)
387 2p1m_B Transport inhibitor res 99.5 1.6E-15 5.5E-20 185.2 0.5 154 112-269 287-468 (594)
388 3g39_A Variable lymphocyte rec 99.5 6.6E-14 2.2E-18 144.3 12.4 107 166-274 11-119 (170)
389 2o6r_A Variable lymphocyte rec 99.5 1.5E-13 5.1E-18 141.9 14.7 91 160-250 48-141 (177)
390 2je0_A Acidic leucine-rich nuc 99.5 4.5E-14 1.5E-18 141.4 10.0 80 162-241 62-148 (149)
391 2r9u_A Variable lymphocyte rec 99.5 1.2E-13 4E-18 143.1 12.5 107 166-274 14-122 (174)
392 2p1m_B Transport inhibitor res 99.5 9.4E-16 3.2E-20 187.3 -5.3 132 38-174 102-245 (594)
393 1ds9_A Outer arm dynein; leuci 99.5 2.1E-16 7.4E-21 166.5 -9.8 110 159-271 65-186 (198)
394 1ds9_A Outer arm dynein; leuci 99.5 2.9E-16 1E-20 165.5 -9.9 43 82-125 39-81 (198)
395 3sb4_A Hypothetical leucine ri 99.4 1.8E-13 6E-18 155.7 9.8 216 16-240 48-328 (329)
396 2ifg_A High affinity nerve gro 99.4 9.8E-13 3.3E-17 150.3 11.2 113 168-282 12-128 (347)
397 2r9u_A Variable lymphocyte rec 99.3 6.6E-12 2.3E-16 129.9 11.9 64 163-226 56-121 (174)
398 3g39_A Variable lymphocyte rec 99.3 1.3E-11 4.6E-16 127.0 12.7 61 163-223 53-115 (170)
399 3un9_A NLR family member X1; l 99.2 1.4E-12 4.8E-17 151.4 -1.4 164 92-255 73-261 (372)
400 3un9_A NLR family member X1; l 99.2 3.7E-12 1.3E-16 147.8 1.4 133 92-224 102-253 (372)
401 2ifg_A High affinity nerve gro 99.1 3.1E-10 1.1E-14 129.5 11.0 98 23-125 14-114 (347)
402 3tm0_A Aminoglycoside 3'-phosp 99.0 4.9E-10 1.7E-14 122.5 10.7 140 806-984 13-212 (263)
403 4gt6_A Cell surface protein; l 99.0 2.1E-08 7.2E-13 116.7 20.9 246 13-268 60-368 (394)
404 4fs7_A Uncharacterized protein 98.9 1E-08 3.5E-13 119.4 16.1 188 68-267 185-376 (394)
405 4fs7_A Uncharacterized protein 98.8 3.7E-08 1.3E-12 114.7 16.7 232 28-271 58-356 (394)
406 2ra8_A Uncharacterized protein 98.8 1.9E-09 6.4E-14 124.6 5.4 82 185-268 250-341 (362)
407 4h09_A Hypothetical leucine ri 98.8 1.1E-07 3.9E-12 109.6 19.5 238 19-267 48-320 (379)
408 4gt6_A Cell surface protein; l 98.8 1.9E-07 6.6E-12 108.5 20.0 235 28-271 50-347 (394)
409 1nd4_A Aminoglycoside 3'-phosp 98.7 8.6E-09 2.9E-13 111.6 7.3 134 806-984 19-213 (264)
410 3dxp_A Putative acyl-COA dehyd 98.7 1.4E-08 4.9E-13 116.4 9.2 148 810-985 41-248 (359)
411 2ra8_A Uncharacterized protein 98.6 1.9E-08 6.4E-13 116.3 6.2 81 162-244 250-341 (362)
412 3sg8_A APH(2'')-ID; antibiotic 98.6 6.3E-08 2.1E-12 108.5 9.4 197 813-1051 26-288 (304)
413 4h09_A Hypothetical leucine ri 98.4 6.8E-06 2.3E-10 94.6 19.4 241 12-270 65-345 (379)
414 1io0_A Tropomodulin; LRR prote 98.4 1.1E-07 3.9E-12 99.0 2.7 115 156-270 28-164 (185)
415 3rw6_A Nuclear RNA export fact 98.3 6.8E-08 2.3E-12 106.7 0.9 94 169-263 148-257 (267)
416 3r70_A Aminoglycoside phosphot 98.3 3.2E-06 1.1E-10 95.4 13.0 131 810-985 40-237 (320)
417 1io0_A Tropomodulin; LRR prote 98.2 5E-07 1.7E-11 94.1 3.8 90 157-246 58-164 (185)
418 3rw6_A Nuclear RNA export fact 98.2 2.3E-07 8E-12 102.4 0.8 78 161-239 167-257 (267)
419 3rfe_A Platelet glycoprotein I 98.0 5.1E-06 1.7E-10 81.7 6.3 72 213-286 11-84 (130)
420 3tdw_A Gentamicin resistance p 98.0 4.1E-05 1.4E-09 85.9 13.6 138 812-985 24-224 (306)
421 4gkh_A Aminoglycoside 3'-phosp 97.9 6.9E-05 2.4E-09 81.7 13.7 131 813-984 30-222 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 97.6 0.00013 4.5E-09 84.0 10.7 76 810-911 44-121 (362)
423 3d1u_A Putative fructosamine-3 97.5 0.00028 9.4E-09 78.7 10.3 76 810-911 18-97 (288)
424 3ats_A Putative uncharacterize 97.5 0.00016 5.6E-09 82.3 8.1 86 810-911 23-120 (357)
425 2q83_A YTAA protein; 2635576, 97.4 0.0019 6.6E-08 72.3 15.2 30 948-984 222-251 (346)
426 2olc_A MTR kinase, methylthior 97.2 0.00076 2.6E-08 78.1 9.3 82 811-909 34-120 (397)
427 3rfe_A Platelet glycoprotein I 96.8 0.0017 5.7E-08 63.6 6.5 55 45-104 12-68 (130)
428 1pgv_A TMD-1, tropomodulin TMD 96.7 0.0015 5.1E-08 68.6 6.2 109 160-268 37-168 (197)
429 3dxq_A Choline/ethanolamine ki 96.6 0.0071 2.4E-07 67.2 11.3 71 812-911 23-95 (301)
430 2pyw_A Uncharacterized protein 96.6 0.0062 2.1E-07 71.2 11.3 32 946-985 230-261 (420)
431 1pgv_A TMD-1, tropomodulin TMD 96.5 0.0016 5.6E-08 68.3 4.5 86 37-122 37-134 (197)
432 3e4g_A ATP synthase subunit S, 96.4 0.0014 4.6E-08 67.7 2.9 80 188-267 62-149 (176)
433 3jr1_A Putative fructosamine-3 96.1 0.045 1.5E-06 61.5 13.9 76 811-911 40-118 (312)
434 2ppq_A HSK, HK, homoserine kin 96.0 0.019 6.6E-07 64.0 10.1 150 810-984 25-216 (322)
435 3csv_A Aminoglycoside phosphot 95.8 0.026 9E-07 63.3 10.2 35 948-985 183-217 (333)
436 3e4g_A ATP synthase subunit S, 95.7 0.0059 2E-07 62.9 3.7 82 164-246 61-153 (176)
437 2qg7_A Ethanolamine kinase PV0 95.5 0.068 2.3E-06 63.3 12.5 72 811-909 112-186 (458)
438 3c5i_A Choline kinase; choline 95.2 0.018 6.1E-07 65.8 6.3 29 949-985 213-241 (369)
439 3f7w_A Putative fructosamine-3 95.0 0.17 5.6E-06 55.6 12.9 75 810-910 18-96 (288)
440 3feg_A Choline/ethanolamine ki 94.6 0.039 1.3E-06 63.7 6.9 143 813-985 56-254 (379)
441 2yle_A Protein spire homolog 1 94.2 0.31 1E-05 51.8 11.9 99 909-1046 33-132 (229)
442 1nw1_A Choline kinase (49.2 KD 94.0 0.25 8.5E-06 57.9 12.0 71 811-909 77-157 (429)
443 1zyl_A Hypothetical protein YI 93.2 0.26 9.1E-06 54.7 10.0 29 948-985 195-223 (328)
444 3i1a_A Spectinomycin phosphotr 92.7 0.37 1.3E-05 54.4 10.5 31 948-985 206-236 (339)
445 3mes_A Choline kinase; malaria 92.7 0.48 1.6E-05 55.4 11.6 73 811-910 74-156 (424)
446 3f2s_A CK, chetk-alpha, cholin 87.1 2.7 9.2E-05 48.7 11.4 36 949-985 245-280 (401)
447 3g15_A CK, chetk-alpha, cholin 83.1 2.1 7.3E-05 49.3 8.1 36 949-985 245-280 (401)
448 3isr_A Transglutaminase-like e 80.3 0.58 2E-05 51.9 1.9 46 705-754 177-226 (293)
449 2f4m_A Peptide N-glycanase; gl 80.0 0.63 2.2E-05 51.4 2.0 45 705-754 139-183 (295)
450 3cxl_A N-chimerin; SH2, RHO-GA 65.7 0.65 2.2E-05 54.9 -2.5 65 810-881 145-215 (463)
451 1x3z_A Peptide: N-glycanase; h 52.2 5.4 0.00019 44.6 2.1 45 705-754 180-224 (335)
452 2q3z_A Transglutaminase 2; tra 47.0 5.1 0.00018 49.1 0.9 31 704-736 272-302 (687)
453 1vjj_A Protein-glutamine gluta 46.1 4.5 0.00015 49.5 0.2 31 704-736 267-297 (692)
454 1ex0_A Coagulation factor XIII 38.7 8.1 0.00028 47.6 0.8 33 703-737 308-340 (731)
455 2ks1_B Epidermal growth factor 35.8 2.3 7.8E-05 33.3 -3.0 29 330-358 10-40 (44)
456 2l2t_A Receptor tyrosine-prote 32.0 1.8 6.1E-05 33.9 -4.1 30 330-359 9-40 (44)
457 1g0d_A Protein-glutamine gamma 28.6 17 0.00057 44.6 1.2 32 704-737 267-298 (695)
458 4ann_A ESSB; membrane protein, 26.5 51 0.0017 34.6 4.3 50 925-983 77-126 (215)
459 2lz0_A Uncharacterized protein 22.2 95 0.0033 28.2 4.8 48 26-77 5-52 (100)
460 4ano_A ESSB; membrane protein, 21.3 68 0.0023 33.8 4.1 50 925-983 81-131 (219)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.2e-50 Score=465.69 Aligned_cols=261 Identities=25% Similarity=0.333 Sum_probs=214.7
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+.++++|++.++||+|+||+||+|++. +..||+|+.... .......+.+ .+|+.+|++++|||||++++++.
T Consensus 20 f~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~~~~----~~E~~il~~l~HpnIV~~~~~~~ 93 (350)
T 4b9d_A 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINIS--RMSSKEREES----RREVAVLANMKHPNIVQYRESFE 93 (350)
T ss_dssp CSCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECT--TSCHHHHHHH----HHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CCcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehH--HCCHHHHHHH----HHHHHHHHHCCCCCCCcEEEEEE
Confidence 446789999999999999999999984 677888886433 2333334444 89999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+++ .+|||||||+||+|.+++.. .+...+++..++.|+.||+.||+|||++|||||||||+||
T Consensus 94 ~~~--------------~~yiVmEy~~gg~L~~~i~~---~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NI 156 (350)
T 4b9d_A 94 ENG--------------SLYIVMDYCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNI 156 (350)
T ss_dssp ETT--------------EEEEEEECCTTCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGE
T ss_pred ECC--------------EEEEEEeCCCCCcHHHHHHH---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHE
Confidence 765 35999999999999999976 3345689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||+|+.+...... ....+||+.|||||++.+ ..|+.++|||||||++
T Consensus 157 Ll~~~-------g~vKl~DFGla~~~~~~~~~----------~~~~~GT~~YmAPE~l~~----~~y~~~~DiwSlGvil 215 (350)
T 4b9d_A 157 FLTKD-------GTVQLGDFGIARVLNSTVEL----------ARACIGTPYYLSPEICEN----KPYNNKSDIWALGCVL 215 (350)
T ss_dssp EECTT-------CCEEECSTTEESCCCHHHHH----------HHHHHSCCTTCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred EECCC-------CCEEEcccccceeecCCccc----------ccccCCCccccCHHHHCC----CCCCcHHHHHHHHHHH
Confidence 99887 78999999999876432211 123579999999999986 6799999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|||++|+.||.+.+..++...+..+..+..+. ..++++.+||.+||+.||++|
T Consensus 216 yemltG~~PF~~~~~~~~~~~i~~~~~~~~~~---------------------------~~s~~~~~li~~~L~~dP~~R 268 (350)
T 4b9d_A 216 YELCTLKHAFEAGSMKNLVLKIISGSFPPVSL---------------------------HYSYDLRSLVSQLFKRNPRDR 268 (350)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHHccCChhHC
Confidence 99999999999988888888887665543321 456679999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001142 1121 PTAGDLYEMFVART 1134 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ 1134 (1142)
||++|+++|+|++.
T Consensus 269 ~s~~e~l~hp~~~~ 282 (350)
T 4b9d_A 269 PSVNSILEKGFIAK 282 (350)
T ss_dssp CCHHHHHTSHHHHT
T ss_pred cCHHHHhcCHHhhc
Confidence 99999999999864
No 2
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.1e-50 Score=461.67 Aligned_cols=257 Identities=26% Similarity=0.422 Sum_probs=216.9
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..|++.++||+|+||+||+|++. +..||+|+...... ...+.+ .+|+.+|++++|||||++++++.+.+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~----~~~~~~----~~Ei~il~~l~HpnIV~l~~~~~~~~- 144 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRELL----FNEVVIMRDYQHENVVEMYNSYLVGD- 144 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC----SSGGGG----HHHHHHHHHCCCTTBCCEEEEEEETT-
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch----hHHHHH----HHHHHHHHhCCCCCCCcEEEEEEECC-
Confidence 45999999999999999999984 67789988654422 112233 79999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
++|||||||+||+|.+++.. ..+++.++..|+.||+.||+|||++|||||||||+|||++.
T Consensus 145 -------------~~~ivmEy~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~ 205 (346)
T 4fih_A 145 -------------ELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 205 (346)
T ss_dssp -------------EEEEEECCCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred -------------EEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECC
Confidence 35999999999999999975 35999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+|+.+..... .....+||+.|||||++.+ ..|+.++|||||||++|||+
T Consensus 206 ~-------g~vKl~DFGla~~~~~~~~----------~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilyeml 264 (346)
T 4fih_A 206 D-------GRVKLSDFGFCAQVSKEVP----------RRKSLVGTPYWMAPELISR----LPYGPEVDIWSLGIMVIEMV 264 (346)
T ss_dssp T-------CCEEECCCTTCEECCSSSC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEecCcCceecCCCCC----------cccccccCcCcCCHHHHCC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 7899999999986543211 1235679999999999876 57899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|+.||.+.+..+....+.....+.+... ...++++.+||.+||+.||++|||++
T Consensus 265 ~G~~PF~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~s~~~~dli~~~L~~dP~~R~ta~ 319 (346)
T 4fih_A 265 DGEPPYFNEPPLKAMKMIRDNLPPRLKNL-------------------------HKVSPSLKGFLDRLLVRDPAQRATAA 319 (346)
T ss_dssp HSSCTTTTSCHHHHHHHHHHSSCCCCSCG-------------------------GGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HCCCCCCCcCHHHHHHHHHcCCCCCCCcc-------------------------ccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 99999999888888887766544332210 14567899999999999999999999
Q ss_pred HHHHHHHhhcCCC
Q 001142 1125 DLYEMFVARTSSS 1137 (1142)
Q Consensus 1125 EVL~~L~~~~ss~ 1137 (1142)
|+++|+|++...+
T Consensus 320 e~l~Hp~~~~~~~ 332 (346)
T 4fih_A 320 ELLKHPFLAKAGP 332 (346)
T ss_dssp HHTTCGGGGGCCC
T ss_pred HHhcCHhhcCCCC
Confidence 9999999987643
No 3
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.3e-49 Score=440.45 Aligned_cols=258 Identities=23% Similarity=0.298 Sum_probs=200.1
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.+++|++.+.||+|+||+||+|++ .+..||+|+...... .. .+...++.+|+.+|++++|||||++++++.++
T Consensus 11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~---~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~ 85 (275)
T 3hyh_A 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL--AK---SDMQGRIEREISYLRLLRHPHIIKLYDVIKSK 85 (275)
T ss_dssp ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHc--CC---HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence 467899999999999999999997 467889988643321 11 12223458999999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+ ..|+||||+ +|+|.+++.+ ...+++.+++.++.||+.||+|||++||+||||||+|||+
T Consensus 86 ~--------------~~~ivmEy~-~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl 145 (275)
T 3hyh_A 86 D--------------EIIMVIEYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 145 (275)
T ss_dssp S--------------EEEEEEECC-CEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE
T ss_pred C--------------EEEEEEeCC-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE
Confidence 5 359999999 6899999976 3579999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+|+...... .....+||+.|||||++.+ ...++.++||||+||++|+
T Consensus 146 ~~~-------~~vkl~DFGla~~~~~~~-----------~~~~~~GT~~Y~APE~~~~---~~y~~~~~DiwSlGvily~ 204 (275)
T 3hyh_A 146 DEH-------LNVKIADFGLSNIMTDGN-----------FLKTSCGSPNYAAPEVISG---KLYAGPEVDVWSCGVILYV 204 (275)
T ss_dssp CTT-------CCEEECCSSCC--------------------------CTTSCHHHHSS---SSCCCTHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeecCCCeecCCCC-----------ccCCeeECcccCChhhhcC---CCCCCChhhhHHHHHHHHH
Confidence 887 789999999997654321 1224579999999999976 2234689999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|+.||.+.+..++...+..+..+ ++ ...++++.+||.+||+.||++|||
T Consensus 205 lltg~~PF~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~~L~~dP~~R~s 256 (275)
T 3hyh_A 205 MLCRRLPFDDESIPVLFKNISNGVYT-LP---------------------------KFLSPGAAGLIKRMLIVNPLNRIS 256 (275)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHTCCC-CC---------------------------TTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHHCCCCCCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHccCChhHCcC
Confidence 99999999988888877777655422 11 034567899999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001142 1123 AGDLYEMFVARTSS 1136 (1142)
Q Consensus 1123 a~EVL~~L~~~~ss 1136 (1142)
++|+++|+|++..-
T Consensus 257 ~~eil~hpw~k~~~ 270 (275)
T 3hyh_A 257 IHEIMQDDWFKVDL 270 (275)
T ss_dssp HHHHHHCHHHHTTC
T ss_pred HHHHHcCcccccCC
Confidence 99999999998653
No 4
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.1e-49 Score=450.72 Aligned_cols=262 Identities=21% Similarity=0.254 Sum_probs=216.6
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
..++|++.++||+|+||+||+|++ .+..+|+|+...... ........+.+|+++|++++|||||++++++.++
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-----~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 104 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-----IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD 104 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence 456899999999999999999998 467789988643211 1111223458999999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+. .|||||||+||+|.+++++ ...+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 105 ~~--------------~yivmEy~~gG~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl 165 (311)
T 4aw0_A 105 EK--------------LYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 165 (311)
T ss_dssp SE--------------EEEEECCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CE--------------EEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE
Confidence 53 4999999999999999986 2469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+|+.+...... ......+||+.|||||++.+ ..|+.++||||+||++||
T Consensus 166 ~~~-------g~vKl~DFGla~~~~~~~~~--------~~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilye 226 (311)
T 4aw0_A 166 NED-------MHIQITDFGTAKVLSPESKQ--------ARANSFVGTAQYVSPELLTE----KSACKSSDLWALGCIIYQ 226 (311)
T ss_dssp CTT-------SCEEECCCTTCEECCTTTTC--------CCBCCCCSCGGGCCHHHHHH----SCBCHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEEEcCCceecCCCCCc--------ccccCcccCcccCCHHHHcC----CCCCcHHHHHHHHHHHHH
Confidence 887 88999999999876432111 12235679999999999987 678999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|+.||.+.+..++...|..+... ++. ..++++++||.+||+.||++|||
T Consensus 227 ml~G~~PF~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~dli~~lL~~dp~~R~t 278 (311)
T 4aw0_A 227 LVAGLPPFRAGNEGLIFAKIIKLEYD-FPE---------------------------KFFPKARDLVEKLLVLDATKRLG 278 (311)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHTCCC-CCT---------------------------TCCHHHHHHHHHHSCSSGGGSTT
T ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCC-CCc---------------------------ccCHHHHHHHHHHccCCHhHCcC
Confidence 99999999998888888887665421 110 34567999999999999999999
Q ss_pred HHH------HHHHHHhhcCCC
Q 001142 1123 AGD------LYEMFVARTSSS 1137 (1142)
Q Consensus 1123 a~E------VL~~L~~~~ss~ 1137 (1142)
++| |++|+||+.-.+
T Consensus 279 ~~e~~~~~~i~~Hp~F~~idw 299 (311)
T 4aw0_A 279 CEEMEGYGPLKAHPFFESVTW 299 (311)
T ss_dssp SGGGTCHHHHHTSGGGTTCCC
T ss_pred hHHHcCCHHHHCCCCcCCCCH
Confidence 987 588899876543
No 5
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=3e-49 Score=444.28 Aligned_cols=259 Identities=24% Similarity=0.348 Sum_probs=202.9
Q ss_pred cceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
|++.++||+|+||+||+|.+..+...|+++.+..........+.| .+|+.+|++++|||||++++++.+...
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~----~~E~~il~~l~HpnIV~~~~~~~~~~~---- 99 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRF----KEEAEMLKGLQHPNIVRFYDSWESTVK---- 99 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHH----HHHHHHHHTCCCTTBCCEEEEEEEEET----
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHH----HHHHHHHHhCCCCCCCcEEEEEeeccC----
Confidence 378889999999999999996544444443344333334444444 899999999999999999999875211
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCeeecccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENILIDLER 966 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g--IvHrDLKp~NILld~~~ 966 (1142)
....+|||||||+||+|.+++++ ...+++..+..|+.||+.||+|||++| ||||||||+|||++...
T Consensus 100 ------~~~~~~lvmEy~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~ 168 (290)
T 3fpq_A 100 ------GKKCIVLVTELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT 168 (290)
T ss_dssp ------TEEEEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTT
T ss_pred ------CCcEEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCC
Confidence 12356999999999999999986 246999999999999999999999998 99999999999997521
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.+||+|||+|+..... .....+||+.|||||++.+ .|+.++|||||||++|||+||
T Consensus 169 ------g~vKl~DFGla~~~~~~------------~~~~~~GTp~YmAPE~~~~-----~y~~~~DiwSlGvilyelltg 225 (290)
T 3fpq_A 169 ------GSVKIGDLGLATLKRAS------------FAKAVIGTPEFMAPEMYEE-----KYDESVDVYAFGMCMLEMATS 225 (290)
T ss_dssp ------SCEEECCTTGGGGCCTT------------SBEESCSSCCCCCGGGGGT-----CCCTHHHHHHHHHHHHHHHHS
T ss_pred ------CCEEEEeCcCCEeCCCC------------ccCCcccCccccCHHHcCC-----CCCcHHHHHHHHHHHHHHHHC
Confidence 78999999999753321 1124579999999999864 589999999999999999999
Q ss_pred CCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1047 QVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1047 ~~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
+.||.+.. ...+...+..+..|... +...++++.+||.+||+.||++|||++|
T Consensus 226 ~~Pf~~~~~~~~~~~~i~~~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dP~~R~s~~e 279 (290)
T 3fpq_A 226 EYPYSECQNAAQIYRRVTSGVKPASF--------------------------DKVAIPEVKEIIEGCIRQNKDERYSIKD 279 (290)
T ss_dssp SCTTTTCSSHHHHHHHHTTTCCCGGG--------------------------GGCCCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred CCCCCCCCcHHHHHHHHHcCCCCCCC--------------------------CccCCHHHHHHHHHHccCChhHCcCHHH
Confidence 99997644 44455555544332211 1134557999999999999999999999
Q ss_pred HHHHHHhhcC
Q 001142 1126 LYEMFVARTS 1135 (1142)
Q Consensus 1126 VL~~L~~~~s 1135 (1142)
+++|+|++..
T Consensus 280 ~l~Hp~~~~~ 289 (290)
T 3fpq_A 280 LLNHAFFQEE 289 (290)
T ss_dssp HHTSGGGC--
T ss_pred HhcCccccCC
Confidence 9999999864
No 6
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-48 Score=441.57 Aligned_cols=266 Identities=24% Similarity=0.372 Sum_probs=207.7
Q ss_pred CCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.+.+++++.++||+|+||+||+|++.+ .+|||+++ .........+.| .+|+.+|++++|||||+++|++.++
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~--~~~~~~~~~~~f----~~E~~il~~l~HpNIV~l~g~~~~~- 104 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILK--VVDPTPEQFQAF----RNEVAVLRKTRHVNILLFMGYMTKD- 104 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECC--CSSCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSS-
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEE--ecCCCHHHHHHH----HHHHHHHHhCCCCCEeeEEEEEECC-
Confidence 345678999999999999999999865 58888754 333344444555 8999999999999999999987542
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..+||||||+||+|.++++. ....+++.++..|+.||+.||+|||+++||||||||+|||++
T Consensus 105 --------------~~~iVmEy~~gGsL~~~l~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~ 166 (307)
T 3omv_A 105 --------------NLAIVTQWCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH 166 (307)
T ss_dssp --------------SCEEEEECCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE
T ss_pred --------------eEEEEEEcCCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC
Confidence 23899999999999999975 235699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +++||+|||+|+........ ......+||+.|||||++.+.. ...|+.++|||||||++|||
T Consensus 167 ~~-------~~~Ki~DFGla~~~~~~~~~--------~~~~~~~GT~~ymAPE~l~~~~-~~~y~~ksDVwS~Gvvl~El 230 (307)
T 3omv_A 167 EG-------LTVKIGDFGLATVKSRWSGS--------QQVEQPTGSVLWMAPEVIRMQD-NNPFSFQSDVYSYGIVLYEL 230 (307)
T ss_dssp TT-------EEEEECCCSSCBC--------------------CCCCTTSCCHHHHHCCS-SCCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEeeccCceecccCCcc--------eeecccccCCCccCHHHhhccC-CCCCCcHHHhHhHHHHHHHH
Confidence 87 88999999999765432111 1123457999999999997522 24689999999999999999
Q ss_pred HhCCCCCCCCCHHH-HHHHHHhCCCC-CchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1044 LTLQVPYMGLSELE-IHDLIQMGKRP-RLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~e-l~~~I~~~~~p-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+||+.||.+.+... +...+..+..+ .... ....+++.+.+|+.+||+.||++||
T Consensus 231 ltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~------------------------~~~~~~~~l~~li~~cl~~dP~~RP 286 (307)
T 3omv_A 231 MTGELPYSHINNRDQIIFMVGRGYASPDLSK------------------------LYKNCPKAMKRLVADCVKKVKEERP 286 (307)
T ss_dssp HHSSCTTTTCCCHHHHHHHHHTTCCCCCSTT------------------------SCTTSCHHHHHHHHHHTCSSSTTSC
T ss_pred HHCCCCCCCCChHHHHHHHHhcCCCCCCccc------------------------ccccchHHHHHHHHHHcCCCHhHCc
Confidence 99999998765544 33444443321 1110 1115667899999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
||.||+++++....
T Consensus 287 s~~ei~~~Le~l~~ 300 (307)
T 3omv_A 287 LFPQILSSIELLQH 300 (307)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999886543
No 7
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=3.8e-49 Score=463.37 Aligned_cols=257 Identities=26% Similarity=0.429 Sum_probs=216.6
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..|++.++||+|+||+||+|++. +..||+|+...... ...+. +.+|+.+|++++|||||+++++|.+.+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~----~~~~~----~~~Ei~il~~l~HpnIV~l~~~~~~~~- 221 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRREL----LFNEVVIMRDYQHENVVEMYNSYLVGD- 221 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC----SSGGG----HHHHHHHHHHCCCTTBCCEEEEEEETT-
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch----hHHHH----HHHHHHHHHhCCCCCCCceEEEEEECC-
Confidence 45999999999999999999984 67788888654321 11222 479999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
++|||||||+||+|.++++. ..+++.++..|+.||+.||+|||++|||||||||+||||+.
T Consensus 222 -------------~~~iVmEy~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~ 282 (423)
T 4fie_A 222 -------------ELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 282 (423)
T ss_dssp -------------EEEEEEECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECT
T ss_pred -------------EEEEEEeCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC
Confidence 35999999999999999975 35999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+|+.+.... ......+||+.|||||++.+ ..|+.++|||||||++|||+
T Consensus 283 ~-------g~vKl~DFGla~~~~~~~----------~~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilyeml 341 (423)
T 4fie_A 283 D-------GRVKLSDFGFCAQVSKEV----------PRRKSLVGTPYWMAPELISR----LPYGPEVDIWSLGIMVIEMV 341 (423)
T ss_dssp T-------CCEEECCCTTCEECCSSC----------CCBCCCEECTTTCCHHHHTT----CCBCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEecCccceECCCCC----------ccccccccCcCcCCHHHHCC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 789999999998654321 11235679999999999976 67899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|+.||.+.+..+....|.....+.+... ...++.+.+||.+||+.||++|||+.
T Consensus 342 ~G~~PF~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~s~~~~dli~~~L~~dP~~R~ta~ 396 (423)
T 4fie_A 342 DGEPPYFNEPPLKAMKMIRDNLPPRLKNL-------------------------HKVSPSLKGFLDRLLVRDPAQRATAA 396 (423)
T ss_dssp HSSCTTTTSCHHHHHHHHHHSCCCCCSCT-------------------------TSSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HCCCCCCCcCHHHHHHHHHcCCCCCCccc-------------------------ccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 99999999888888888766544332210 14567799999999999999999999
Q ss_pred HHHHHHHhhcCCC
Q 001142 1125 DLYEMFVARTSSS 1137 (1142)
Q Consensus 1125 EVL~~L~~~~ss~ 1137 (1142)
|+++|+|++....
T Consensus 397 ell~Hp~~~~~~~ 409 (423)
T 4fie_A 397 ELLKHPFLAKAGP 409 (423)
T ss_dssp HHTTCGGGGGCCC
T ss_pred HHhcCHHhcCCCC
Confidence 9999999987643
No 8
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=1.4e-48 Score=440.98 Aligned_cols=260 Identities=24% Similarity=0.353 Sum_probs=212.3
Q ss_pred CCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
-++|.+.++||+|+||+||+|++. +..||||+. +. ......++| .+|+++|++++|||||+++|+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l--~~--~~~~~~~~f----~~E~~il~~l~HpnIV~l~g~ 83 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTL--KD--ASDNARKDF----HREAELLTNLQHEHIVKFYGV 83 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEE--CS--CCHHHHHHH----HHHHHHHTTCCCTTBCCEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEe--CC--CChHHHHHH----HHHHHHHHhCCCCCCccEEEE
Confidence 457899999999999999999873 445777764 32 233344444 899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHh--------ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLS--------ETGEKHVSVKLALFIAQDVAAALVELHSKHI 950 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~--------~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gI 950 (1142)
+.+.+. .+||||||++|+|.++++... ......+++.++..|+.||+.||+|||+++|
T Consensus 84 ~~~~~~--------------~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~i 149 (299)
T 4asz_A 84 CVEGDP--------------LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHF 149 (299)
T ss_dssp ECSSSS--------------EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EeeCCE--------------EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence 987653 499999999999999998632 1223579999999999999999999999999
Q ss_pred cccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCch
Q 001142 951 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLE 1030 (1142)
Q Consensus 951 vHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~k 1030 (1142)
|||||||+|||++.+ +++||+|||+|+......... ......||+.|||||++.+ ..|+.+
T Consensus 150 iHRDlKp~NILl~~~-------~~~Ki~DFGla~~~~~~~~~~--------~~~~~~gt~~ymAPE~~~~----~~~~~k 210 (299)
T 4asz_A 150 VHRDLATRNCLVGEN-------LLVKIGDFGMSRDVYSTDYYR--------VGGHTMLPIRWMPPESIMY----RKFTTE 210 (299)
T ss_dssp CCSCCSGGGEEECGG-------GCEEECCCSCHHHHTGGGCEE--------ETTTEEECGGGCCHHHHHH----CCCCHH
T ss_pred ccCccCHhhEEECCC-------CcEEECCcccceecCCCCcee--------ecCceecChhhcCHHHHcC----CCCCch
Confidence 999999999999988 789999999998654322110 1123468999999999986 679999
Q ss_pred hhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHH
Q 001142 1031 VDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF 1109 (1142)
Q Consensus 1031 sDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI 1109 (1142)
+|||||||++|||+| |+.||.+.+..++...+..+..+..+. .+++++.+|+
T Consensus 211 ~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~~~~li 263 (299)
T 4asz_A 211 SDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPR---------------------------TCPQEVYELM 263 (299)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cchHHHHHHH
Confidence 999999999999999 899999988888888887776544331 4566799999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1110 RRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1110 ~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.+||+.||++||||.||++.|...
T Consensus 264 ~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 264 LGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHcCCChhHCcCHHHHHHHHHHH
Confidence 999999999999999998877654
No 9
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.4e-48 Score=443.62 Aligned_cols=263 Identities=24% Similarity=0.346 Sum_probs=209.5
Q ss_pred CCCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
...+|.+.++||+|+||+||+|++. +..||||+.+ . ......++| .+|+++|++++|||||+++|
T Consensus 39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~--~--~~~~~~~~f----~~E~~il~~l~HpnIV~l~g 110 (329)
T 4aoj_A 39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALK--E--ASESARQDF----QREAELLTMLQHQHIVRFFG 110 (329)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEES--C--CSHHHHHHH----HHHHHHHTTCCCTTBCCEEE
T ss_pred CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEEC--c--CCHHHHHHH----HHHHHHHHhCCCCCCCcEEE
Confidence 3457899999999999999999974 4567777743 2 233444445 89999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc----------cCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE----------TGEKHVSVKLALFIAQDVAAALVELHS 947 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~----------~~~~~ls~~~i~~Ia~qIa~gL~yLHs 947 (1142)
++.+.+. .+||||||++|+|.++++.... ....++++.++..|+.||+.||+|||+
T Consensus 111 ~~~~~~~--------------~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~ 176 (329)
T 4aoj_A 111 VCTEGRP--------------LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176 (329)
T ss_dssp EECSSSS--------------EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCE--------------EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 9987553 4999999999999999975321 112469999999999999999999999
Q ss_pred CCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC
Q 001142 948 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1027 (1142)
Q Consensus 948 ~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1027 (1142)
++||||||||+|||++.+ +++||+|||+|+........ .......||+.|||||++.+ ..|
T Consensus 177 ~~iiHRDLKp~NILl~~~-------~~~Ki~DFGla~~~~~~~~~--------~~~~~~~gt~~ymAPE~~~~----~~~ 237 (329)
T 4aoj_A 177 LHFVHRDLATRNCLVGQG-------LVVKIGDFGMSRDIYSTDYY--------RVGGRTMLPIRWMPPESILY----RKF 237 (329)
T ss_dssp TTCCCSCCCGGGEEEETT-------TEEEECCCC------------------------CCCCGGGCCHHHHTT----CCC
T ss_pred CCeecccccHhhEEECCC-------CcEEEcccccceeccCCCcc--------eecCcccccccccChhhhcC----CCC
Confidence 999999999999999987 89999999999865432111 11224569999999999986 678
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001142 1028 GLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1106 (1142)
Q Consensus 1028 s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1106 (1142)
+.++|||||||++|||+| |+.||.+.+..++...+..+.++..+. .+++++.
T Consensus 238 ~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~---------------------------~~~~~~~ 290 (329)
T 4aoj_A 238 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR---------------------------ACPPEVY 290 (329)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCT---------------------------TCCHHHH
T ss_pred CccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcc---------------------------cccHHHH
Confidence 999999999999999999 899999988888888887766544321 4566799
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1107 DVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1107 dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+|+.+||+.||++||||.||+++|.....
T Consensus 291 ~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 291 AIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 99999999999999999999999877543
No 10
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.7e-48 Score=440.55 Aligned_cols=264 Identities=21% Similarity=0.325 Sum_probs=215.0
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccce
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 875 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl 875 (1142)
..++.++++.++||+|+||+||+|++. +..||||+. +.... ....++| .+|+.++++++|||||++
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l--~~~~~-~~~~~~f----~~E~~il~~l~HpNIV~l 94 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTL--KDKAE-GPLREEF----RHEAMLRARLQHPNVVCL 94 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEEC--CC-CC-C-CHHHH----HHHHHHHHHCCCTTBCCE
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEE--CcccC-hHHHHHH----HHHHHHHHhCCCCCCCCc
Confidence 345667899999999999999999973 345777764 32221 2223344 899999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 944 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----------~~~~ls~~~i~~Ia~qIa~gL~y 944 (1142)
+|++.+++.+ +||||||++|+|.+++...... ....+++..+..|+.||+.||+|
T Consensus 95 ~g~~~~~~~~--------------~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~y 160 (308)
T 4gt4_A 95 LGVVTKDQPL--------------SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEY 160 (308)
T ss_dssp EEEECSSSSC--------------EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEECCEE--------------EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 9999876544 9999999999999999752211 12468999999999999999999
Q ss_pred HHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 945 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 945 LHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
||+++||||||||+|||++.+ +++||+|||+|+........ .......||+.|||||++.+
T Consensus 161 LH~~~iiHRDLK~~NILl~~~-------~~~Ki~DFGlar~~~~~~~~--------~~~~~~~gt~~ymAPE~l~~---- 221 (308)
T 4gt4_A 161 LSSHHVVHKDLATRNVLVYDK-------LNVKISDLGLFREVYAADYY--------KLLGNSLLPIRWMAPEAIMY---- 221 (308)
T ss_dssp HHHTTCCCSCCSGGGEEECGG-------GCEEECCSCCBCGGGGGGCB--------CSSSSSCBCGGGCCHHHHHH----
T ss_pred HHhCCCCCCCccccceEECCC-------CCEEECCcccceeccCCCce--------eEecccccCCcccCHHHHhC----
Confidence 999999999999999999988 78999999999865432211 12234579999999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001142 1025 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1103 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1142)
..|+.++|||||||++|||+| |+.||.+.+..++...+..+..++.+. .+++
T Consensus 222 ~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~ 274 (308)
T 4gt4_A 222 GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPD---------------------------DCPA 274 (308)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCH
T ss_pred CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcc---------------------------cchH
Confidence 579999999999999999999 899999998888888887665543321 4566
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1104 FLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1104 ~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.+.+|+.+||+.||++||||.||+++|...
T Consensus 275 ~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 275 WVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 799999999999999999999999998764
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.9e-49 Score=446.82 Aligned_cols=257 Identities=24% Similarity=0.261 Sum_probs=207.7
Q ss_pred CCCCcceeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~-----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
+.++|++.+.||+|+||+||+|++ .+..||+|+...... ....... +.+|+++|++++|||||++++++
T Consensus 22 ~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~~----~~~E~~il~~l~HpnIv~l~~~~ 95 (304)
T 3ubd_A 22 DPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL--KVRDRVR----TKMERDILVEVNHPFIVKLHYAF 95 (304)
T ss_dssp CGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEE--EEEECC----------CCCCCCCCTTEECEEEEE
T ss_pred CccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHc--ChHHHHH----HHHHHHHHHHCCCCCCCeEEEEE
Confidence 346899999999999999999987 245689998643221 1111122 37899999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+++ ..|||||||+||+|.+++++ ...+++.++..|+.||+.||+|||++||+||||||+|
T Consensus 96 ~~~~--------------~~~ivmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~N 156 (304)
T 3ubd_A 96 QTEG--------------KLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPEN 156 (304)
T ss_dssp EETT--------------EEEEEECCCTTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGG
T ss_pred EECC--------------EEEEEEEcCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHH
Confidence 8765 34999999999999999986 2469999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||+|+...... ......+||+.|||||++.+ ..|+.++|||||||+
T Consensus 157 ILl~~~-------g~vKl~DFGla~~~~~~~----------~~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvi 215 (304)
T 3ubd_A 157 ILLDEE-------GHIKLTDFGLSKESIDHE----------KKAYSFCGTVEYMAPEVVNR----RGHTQSADWWSFGVL 215 (304)
T ss_dssp EEECTT-------SCEEEESSEEEEC---------------CCCCSCCCCGGGCCHHHHHT----SCCCTHHHHHHHHHH
T ss_pred eEEcCC-------CCEEecccccceeccCCC----------ccccccccCcccCCHHHhcc----CCCCCCCcccchHHH
Confidence 999987 789999999997543311 11234679999999999976 678999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|||+||+.||.+.+..++...+..+..+. + ...++++.+||.+||+.||++
T Consensus 216 lyemltG~~PF~~~~~~~~~~~i~~~~~~~-p---------------------------~~~s~~~~~li~~~L~~dP~~ 267 (304)
T 3ubd_A 216 MFEMLTGTLPFQGKDRKETMTMILKAKLGM-P---------------------------QFLSPEAQSLLRMLFKRNPAN 267 (304)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-C---------------------------TTSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHhCCCCCCCcCHHHHHHHHHcCCCCC-C---------------------------CcCCHHHHHHHHHHcccCHHH
Confidence 999999999999988888888876554321 1 034567999999999999999
Q ss_pred CCC-----HHHHHHHHHhhcC
Q 001142 1120 RPT-----AGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPS-----a~EVL~~L~~~~s 1135 (1142)
||| ++|+++|+|++.-
T Consensus 268 R~ta~~~~~~eil~Hp~f~~i 288 (304)
T 3ubd_A 268 RLGAGPDGVEEIKRHSFFSTI 288 (304)
T ss_dssp STTCSTTTHHHHHTSGGGTTC
T ss_pred CCCCCcCCHHHHHcCccccCC
Confidence 998 5899999999753
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.5e-48 Score=442.43 Aligned_cols=254 Identities=24% Similarity=0.322 Sum_probs=204.5
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
++.|++.++||+|+||+||+|++. +..||+|+.+.+.. . .+|+.+|++++|||||++++++.+.+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~---------~----~~E~~il~~l~HpnIV~l~~~~~~~~ 123 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF---------R----VEELVACAGLSSPRIVPLYGAVREGP 123 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC---------C----THHHHTTTTCCCTTBCCEEEEEEETT
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh---------H----HHHHHHHHhCCCCCCCcEEEEEEECC
Confidence 456899999999999999999984 67788888654321 1 37999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.+|||||||+||+|.+++++ ...+++..+..|+.||+.||+|||++|||||||||+|||++
T Consensus 124 --------------~~~ivmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~ 184 (336)
T 4g3f_A 124 --------------WVNIFMELLEGGSLGQLIKQ-----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 184 (336)
T ss_dssp --------------EEEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEC
T ss_pred --------------EEEEEEeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEe
Confidence 34999999999999999986 24699999999999999999999999999999999999998
Q ss_pred cccccCCCCC-eEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 964 LERKKADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 964 ~~~~~~~~~~-~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
.+ + .+||+|||+|+.+....... ........+||+.|||||++.+ ..|+.++|||||||++||
T Consensus 185 ~~-------g~~vKl~DFGla~~~~~~~~~~-----~~~~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvilye 248 (336)
T 4g3f_A 185 SD-------GSRAALCDFGHALCLQPDGLGK-----SLLTGDYIPGTETHMAPEVVMG----KPCDAKVDIWSSCCMMLH 248 (336)
T ss_dssp TT-------SCCEEECCCTTCEEC-----------------CCCCCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEeeCCCCeEccCCCccc-----ceecCCccccCccccCHHHHCC----CCCCcHHHHHHHHHHHHH
Confidence 76 4 69999999998764322110 0112234579999999999986 678999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|+.||.+.+..++...+.....+.. .....+++.+.+||.+||+.||.+|||
T Consensus 249 mltG~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~s~~~~~li~~~L~~dP~~R~s 303 (336)
T 4g3f_A 249 MLNGCHPWTQYFRGPLCLKIASEPPPIR-------------------------EIPPSCAPLTAQAIQEGLRKEPVHRAS 303 (336)
T ss_dssp HHHSSCSSTTTCCSCCHHHHHHSCCGGG-------------------------GSCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHHCcCCCCCCCHHHHHHHHHcCCCCch-------------------------hcCccCCHHHHHHHHHHccCCHhHCcC
Confidence 9999999988766666666654432110 001155678999999999999999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
+.|+++++..
T Consensus 304 a~el~~~l~~ 313 (336)
T 4g3f_A 304 AMELRRKVGK 313 (336)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999877654
No 13
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-46 Score=436.83 Aligned_cols=292 Identities=16% Similarity=0.204 Sum_probs=214.3
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||+||+|++. +..||+|+.+ .........+. +.+|+.+|++++|||||++++++.....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~--~~~~~~~~~~~----~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 127 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIP--NAFDVVTNAKR----TLRELKILKHFKHDNIIAIKDILRPTVP 127 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEET--TTTSSHHHHHH----HHHHHHHHHHCCCTTBCCEEEECCCSSC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEEC--ccccchHHHHH----HHHHHHHHHhcCCCCcceEeeeeecccc
Confidence 46999999999999999999984 6678888753 33333333333 4799999999999999999999876432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+ ....++|||||||+ |+|.+++.. ...+++..++.|++||+.||+|||++|||||||||+|||++.
T Consensus 128 ~--------~~~~~~~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~ 193 (398)
T 4b99_A 128 Y--------GEFKSVYVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE 193 (398)
T ss_dssp T--------TTCCCEEEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred c--------ccCCEEEEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCC
Confidence 2 12236799999996 789999864 357999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+|+.+...... ........+||+.|||||++.+ ...|+.++||||+||++|||+
T Consensus 194 ~-------~~~Ki~DFGla~~~~~~~~~------~~~~~~~~~GT~~Y~APEv~~~---~~~~~~~~DiWSlG~il~ell 257 (398)
T 4b99_A 194 N-------CELKIGDFGMARGLCTSPAE------HQYFMTEYVATRWYRAPELMLS---LHEYTQAIDLWSVGCIFGEML 257 (398)
T ss_dssp T-------CCEEECCCTTCBCC-------------CCCCCSSCCCCTTCCHHHHTT---CSCCCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeecceeeecccCccc------cccccccceeChHhcCHHHhcC---CCCCCChhheehhHHHHHHHH
Confidence 7 88999999999865432111 1112335689999999999876 245789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCC---chhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK---PEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|++||.+.+..+....|...........+.................... .......++++.+||.+||+.||.+||
T Consensus 258 ~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ 337 (398)
T 4b99_A 258 ARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARI 337 (398)
T ss_dssp HTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSC
T ss_pred HCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCc
Confidence 99999999888887777743322111111111000000000000000000 011114567899999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001142 1122 TAGDLYEMFVART 1134 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ 1134 (1142)
||.|+++|+|++.
T Consensus 338 ta~e~L~Hp~f~~ 350 (398)
T 4b99_A 338 SAAAALRHPFLAK 350 (398)
T ss_dssp CHHHHTTSGGGTT
T ss_pred CHHHHhcCHhhCc
Confidence 9999999999975
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.9e-46 Score=421.33 Aligned_cols=277 Identities=24% Similarity=0.285 Sum_probs=192.9
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||+||+|++. +..||+|+..... .....+ ++.+|+.+|++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~----~~~~E~~il~~l~HpnIV~~~~~~~~~~~ 77 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELARE----KVMREVKALAKLEHPGIVRYFNAWLEKNT 77 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHH----HHHHHHHHHTTCCCTTBCCEEEEEEEEC-
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHH----HHHHHHHHHHhCCCCCCCeEEEEEEecCc
Confidence 46899999999999999999984 6678888764332 222233 34899999999999999999999876442
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.... .......++|+|||||++|+|.++++.. ......++..++.|+.||+.||+|||++|||||||||+|||++.
T Consensus 78 ~~~~--~~~~~~~~l~ivmE~~~gg~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~ 153 (299)
T 4g31_A 78 TEKL--QPSSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM 153 (299)
T ss_dssp -----------CEEEEEEEECCCSCCHHHHHHTC--CSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred cccc--cccCCCcEEEEEEecCCCCcHHHHHHhc--CCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECC
Confidence 1000 0011223579999999999999999752 11123566778999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccc--cCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA--HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~--~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+ +.+||+|||+|+.+.......... ..........+||+.|||||++.+ ..|+.++|||||||++||
T Consensus 154 ~-------~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvilye 222 (299)
T 4g31_A 154 D-------DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG----NSYSHKVDIFSLGLILFE 222 (299)
T ss_dssp T-------CCEEECCCCCC--------------------------CCCTTSCHHHHTT----CCCCTHHHHHHHHHHHHH
T ss_pred C-------CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcC----CCCCCHHHHHHHHHHHHH
Confidence 7 789999999998765432111000 000111234579999999999986 679999999999999999
Q ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++ ||.+.... .....+.....|.. ....++.+.+||.+||+.||++||
T Consensus 223 ll~---Pf~~~~~~~~~~~~~~~~~~p~~---------------------------~~~~~~~~~~li~~~L~~dP~~Rp 272 (299)
T 4g31_A 223 LLY---PFSTQMERVRTLTDVRNLKFPPL---------------------------FTQKYPCEYVMVQDMLSPSPMERP 272 (299)
T ss_dssp HHS---CCSSHHHHHHHHHHHHTTCCCHH---------------------------HHHHCHHHHHHHHHHTCSSGGGSC
T ss_pred Hcc---CCCCccHHHHHHHHHhcCCCCCC---------------------------CcccCHHHHHHHHHHcCCChhHCc
Confidence 996 78642211 12222332222211 113345578899999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++|+|++.-
T Consensus 273 s~~eil~h~~~~~~ 286 (299)
T 4g31_A 273 EAINIIENAVFEDL 286 (299)
T ss_dssp CHHHHHTSGGGCCC
T ss_pred CHHHHhcCHhhCCC
Confidence 99999999999854
No 15
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=8.5e-46 Score=419.43 Aligned_cols=266 Identities=25% Similarity=0.296 Sum_probs=199.2
Q ss_pred CcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
+|.+.++||+|+||+||+|+++++.||||+...+ ..+.+ ....|+..+.+++|||||++++++.+++.
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~-------~~~~~--~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~--- 71 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERSW--FREAEIYQTVMLRHENILGFIAADNKDNG--- 71 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTEEEEEEEECGG-------GHHHH--HHHHHHHTSTTCCCTTBCCEEEEEEEECS---
T ss_pred EEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc-------chhhH--HHHHHHHHHhcCCCCCCCcEEEEEEecCC---
Confidence 5889999999999999999999999999986422 11122 12456777778999999999999986432
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CccccCCCCCC
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------HIMHRDIKSEN 959 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~--------gIvHrDLKp~N 959 (1142)
...++|||||||++|+|.++++. ..+++..+.+|+.|++.||+|||++ +||||||||+|
T Consensus 72 -------~~~~~~lV~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~N 138 (303)
T 3hmm_A 72 -------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKN 138 (303)
T ss_dssp -------SSEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGG
T ss_pred -------CceEEEEEecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCccc
Confidence 12357999999999999999976 3589999999999999999999987 99999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccC--CCCCCchhhHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK--PNLYGLEVDIWSYG 1037 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~~~~s~ksDVwSLG 1037 (1142)
||++.+ +++||+|||+|+......... .......+||+.|||||++.+... ...|+.++||||||
T Consensus 139 ILl~~~-------~~~Ki~DFGla~~~~~~~~~~------~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~G 205 (303)
T 3hmm_A 139 ILVKKN-------GTCCIADLGLAVRHDSATDTI------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 205 (303)
T ss_dssp EEECTT-------SCEEECCCTTCEEEETTTTEE------SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHH
T ss_pred EEECCC-------CCEEEEeCCCCccccCCCCce------eeecccccccccccCHHHhcccccccCCccChhHhhhhHH
Confidence 999988 889999999998654432211 011234579999999999975321 12467899999999
Q ss_pred HHHHHHHhCCCCCCCC---------------CHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhh
Q 001142 1038 CLLLELLTLQVPYMGL---------------SELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET 1101 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~---------------~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1142)
|++|||+||..||... ...++...+ ....+|.++... ...+.
T Consensus 206 vvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~----------------------~~~~~ 263 (303)
T 3hmm_A 206 LVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QSCEA 263 (303)
T ss_dssp HHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG----------------------GSSHH
T ss_pred HHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccc----------------------cchHH
Confidence 9999999997766321 112222222 122223222211 11155
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1102 LSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1102 ~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
++.+.+|+.+||+.||++||||.||+++|...
T Consensus 264 ~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 264 LRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp HHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 67899999999999999999999999998764
No 16
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.3e-46 Score=427.55 Aligned_cols=262 Identities=23% Similarity=0.365 Sum_probs=208.1
Q ss_pred CCCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g 877 (1142)
.++|++.++||+|+||+||+|++.+ +.||||+.. .. ......+.| .+|+.+|+++. |||||+++|
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~--~~-~~~~~~~~~----~~E~~il~~l~hhpnIV~l~g 135 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK--EG-ATHSEHRAL----MSELKILIHIGHHLNVVNLLG 135 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEEC--TT-CCHHHHHHH----HHHHHHHHHHCCCTTBCCEEE
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEc--cc-cChHHHHHH----HHHHHHHHHcCCCCcEEEEEE
Confidence 4679999999999999999999743 346666643 21 223334444 89999999996 599999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHHHH
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVELH 946 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----------~~~~ls~~~i~~Ia~qIa~gL~yLH 946 (1142)
++.+++. .++||||||++|+|.++++..... ....+++..+..|+.|||.||+|||
T Consensus 136 ~~~~~~~-------------~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH 202 (353)
T 4ase_A 136 ACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 202 (353)
T ss_dssp EECCTTS-------------CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCC-------------EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh
Confidence 9865321 249999999999999999864321 1245899999999999999999999
Q ss_pred hCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001142 947 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1026 (1142)
Q Consensus 947 s~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1026 (1142)
+++||||||||+|||++.+ +++||+|||+|+.+...... .......||+.|||||++.+ ..
T Consensus 203 ~~~iiHRDLK~~NILl~~~-------~~vKi~DFGlar~~~~~~~~--------~~~~~~~gt~~ymAPE~l~~----~~ 263 (353)
T 4ase_A 203 SRKCIHRDLAARNILLSEK-------NVVKICDFGLARDIYKDPDY--------VRKGDARLPLKWMAPETIFD----RV 263 (353)
T ss_dssp HTTCCCSCCSGGGEEECGG-------GCEEECCCGGGSCTTTCTTS--------EEETTEEECGGGCCHHHHHH----CC
T ss_pred hCCeecCccCccceeeCCC-------CCEEECcchhhhhcccCCCc--------eeeccccccccccCHHHHhc----CC
Confidence 9999999999999999988 78999999999865432211 01124568999999999987 67
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHH
Q 001142 1027 YGLEVDIWSYGCLLLELLT-LQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1104 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1142)
|+.++|||||||++|||+| |+.||.+... ..+...+..+.++..+. .++++
T Consensus 264 y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~---------------------------~~~~~ 316 (353)
T 4ase_A 264 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD---------------------------YTTPE 316 (353)
T ss_dssp CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCT---------------------------TCCHH
T ss_pred CCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCc---------------------------cCCHH
Confidence 9999999999999999998 8999987653 44556666665544332 44567
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1105 LVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1105 L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
+.+++.+||+.||++||||.||++||...
T Consensus 317 ~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 317 MYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 99999999999999999999999998653
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=3.9e-44 Score=415.34 Aligned_cols=286 Identities=19% Similarity=0.165 Sum_probs=198.0
Q ss_pred CCcceeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 880 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~ 880 (1142)
+.|++.++||+|+||+||+|++. +..||+|+. .... ... ++.+|+++|+.+ +|||||++++++.
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i--~~~~----~~~----~~~~E~~~l~~~~~h~nIv~l~~~~~ 90 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHL--IPTS----HPI----RIAAELQCLTVAGGQDNVMGVKYCFR 90 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEE--CTTS----CHH----HHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEE--cccc----CHH----HHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 46999999999999999999862 345777754 2211 111 237899999998 6999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+ +.|+||||++||+|.++++ .+++.+++.++.||+.||+|||++||+||||||+||
T Consensus 91 ~~~--------------~~~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNi 148 (361)
T 4f9c_A 91 KND--------------HVVIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNF 148 (361)
T ss_dssp ETT--------------EEEEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred ECC--------------EEEEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHe
Confidence 765 4599999999999999884 389999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCccccccccccccc------------------ccCCCCCCCCccCCCcccchhhhcccc
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI------------------AHRGIPAPDVCVGTPRWMAPEVLRAMH 1022 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~------------------~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1022 (1142)
|++.+. +.+||+|||+|+........... ...........+||+.|||||++.+
T Consensus 149 Ll~~~~------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-- 220 (361)
T 4f9c_A 149 LYNRRL------KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK-- 220 (361)
T ss_dssp EEETTT------TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTT--
T ss_pred EEeCCC------CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcC--
Confidence 997652 68999999999764332110000 0000011234579999999999876
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCCCCCCC-CHHHHHHHHHhCCC-CCc----------------------hhHHhhhc
Q 001142 1023 KPNLYGLEVDIWSYGCLLLELLTLQVPYMGL-SELEIHDLIQMGKR-PRL----------------------TDELEALG 1078 (1142)
Q Consensus 1023 ~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~-~~~el~~~I~~~~~-p~l----------------------~~~l~~~~ 1078 (1142)
...|+.++||||+||++|||++|+.||... +..+....|..... +.. ........
T Consensus 221 -~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 299 (361)
T 4f9c_A 221 -CPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLR 299 (361)
T ss_dssp -CSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC
T ss_pred -CCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhc
Confidence 245889999999999999999999999643 34444444321100 000 00000000
Q ss_pred ccccccccccC----CCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1079 SCHEHEVAQSG----SGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1079 ~~~~~~~~~~~----~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
. ......... ............++++.+||.+||+.||++||||+|+++|+|++.
T Consensus 300 ~-~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 300 G-MDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp -----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred c-ccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 0 000000000 000000011245678999999999999999999999999999974
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=8.4e-44 Score=436.16 Aligned_cols=261 Identities=21% Similarity=0.261 Sum_probs=215.6
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+++|++.+.||+|+||+||+|++ .+..+|+|+.... .....+. +.+|+.+|++++|||||+++++|.+..
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~----~~~~~~~----~~~Ei~il~~l~hpnIv~l~~~~~~~~ 227 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKET----VRKEIQTMSVLRHPTLVNLHDAFEDDN 227 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHHHH----HHHHHHHHHHTCCTTBCCEEEEEECSS
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc----chhhHHH----HHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 46899999999999999999998 4667888875432 2233333 479999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
++|||||||+||+|.+++.. ....+++.++..|+.||+.||+|||++||+||||||+|||++
T Consensus 228 --------------~~~iv~E~~~gg~L~~~i~~----~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~ 289 (573)
T 3uto_A 228 --------------EMVMIYEFMSGGELFEKVAD----EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 289 (573)
T ss_dssp --------------EEEEEEECCCCCBHHHHHTC----TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred --------------EEEEEEeecCCCcHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhcccc
Confidence 45999999999999999853 234699999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+. .+.+||+|||+|+.+...... ...+||+.|||||++.+ ..|+.++|||||||++|||
T Consensus 290 ~~~-----~~~vKl~DFG~a~~~~~~~~~-----------~~~~GT~~y~APEv~~~----~~y~~~~DiWSlGvilyem 349 (573)
T 3uto_A 290 TKR-----SNELKLIDFGLTAHLDPKQSV-----------KVTTGTAEFAAPEVAEG----KPVGYYTDMWSVGVLSYIL 349 (573)
T ss_dssp SSS-----CCCEEECCCSSCEECCTTSEE-----------EEECSSGGGCCHHHHTT----CCBCHHHHHHHHHHHHHHH
T ss_pred CCC-----CCCEEEeeccceeEccCCCce-----------eeeEECccccCHHHhCC----CCCCcHHHHHHHHHHHHHH
Confidence 542 268999999999876542211 24479999999999986 6789999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||.+.+..+.+..|........... ....++.+.+||.+||+.||.+|||+
T Consensus 350 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~dli~~~L~~dp~~R~t~ 405 (573)
T 3uto_A 350 LSGLSPFGGENDDETLRNVKSCDWNMDDSA------------------------FSGISEDGKDFIRKLLLADPNTRMTI 405 (573)
T ss_dssp HHSCCSSCCSSHHHHHHHHHTTCCCCCSGG------------------------GTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HHCCCCCCCcCHHHHHHHHHhCCCCCCccc------------------------ccCCCHHHHHHHHHHccCChhHCcCH
Confidence 999999999888888888765543211110 01456779999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 001142 1124 GDLYEMFVARTSS 1136 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss 1136 (1142)
.|+++|+|++...
T Consensus 406 ~e~l~Hpw~~~~~ 418 (573)
T 3uto_A 406 HQALEHPWLTPGN 418 (573)
T ss_dssp HHHHHSTTTSCCC
T ss_pred HHHhcCcCcCCCC
Confidence 9999999998653
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=4.9e-44 Score=438.08 Aligned_cols=262 Identities=20% Similarity=0.238 Sum_probs=207.4
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+.++++|++.++||+|+||+||+|++ .+..+|+|+.......... ..........++.+++.++|||||+++++|.
T Consensus 185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~--~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~ 262 (689)
T 3v5w_A 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQ--GETLALNERIMLSLVSTGDCPFIVCMSYAFH 262 (689)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTT--CHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE
T ss_pred CCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhh--hHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE
Confidence 56789999999999999999999998 4677888886432110000 0111011134567778889999999999999
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+. +|||||||+||+|.+++.+ ...+++..++.|+.||+.||+|||++|||||||||+||
T Consensus 263 ~~~~--------------lylVmEy~~GGdL~~~l~~-----~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNI 323 (689)
T 3v5w_A 263 TPDK--------------LSFILDLMNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323 (689)
T ss_dssp CSSE--------------EEEEECCCCSCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGE
T ss_pred ECCE--------------EEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHe
Confidence 7664 5999999999999999986 24699999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +++||+|||+|+.+... .....+||+.|||||++.. +..|+.++|||||||++
T Consensus 324 Lld~~-------G~vKL~DFGlA~~~~~~------------~~~t~~GTp~YmAPEvl~~---~~~y~~~vDiWSLGvil 381 (689)
T 3v5w_A 324 LLDEH-------GHVRISDLGLACDFSKK------------KPHASVGTHGYMAPEVLQK---GVAYDSSADWFSLGCML 381 (689)
T ss_dssp EECTT-------SCEEECCCTTCEECSSC------------CCCSCCSCGGGCCHHHHST---TCCCCTHHHHHHHHHHH
T ss_pred EEeCC-------CCEEecccceeeecCCC------------CCCCccCCcCccCHHHHhC---CCCCCcHHHHHHHHHHH
Confidence 99987 89999999999765431 1234579999999999864 24689999999999999
Q ss_pred HHHHhCCCCCCCC---CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1041 LELLTLQVPYMGL---SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~---~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
|||++|++||.+. ...++...+..... .++ ...++++.+||.+||+.||
T Consensus 382 YEmLtG~~PF~~~~~~~~~~i~~~i~~~~~-~~p---------------------------~~~S~~a~dLI~~lL~~dP 433 (689)
T 3v5w_A 382 FKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-ELP---------------------------DSFSPELRSLLEGLLQRDV 433 (689)
T ss_dssp HHHHHSSCTTCGGGCCCHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHHHHHTCSCG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHhhcCCCC-CCC---------------------------ccCCHHHHHHHHHHccCCH
Confidence 9999999999753 22333444333221 111 1456679999999999999
Q ss_pred CCCCC-----HHHHHHHHHhhcC
Q 001142 1118 TERPT-----AGDLYEMFVARTS 1135 (1142)
Q Consensus 1118 ~~RPS-----a~EVL~~L~~~~s 1135 (1142)
.+|++ ++||++|+||+.-
T Consensus 434 ~~Rl~~~~~ga~ei~~HpfF~~i 456 (689)
T 3v5w_A 434 NRRLGCLGRGAQEVKESPFFRSL 456 (689)
T ss_dssp GGCTTCSSSTHHHHTTSGGGTTC
T ss_pred hHCCCCCCCCHHHHhcCccccCC
Confidence 99998 8999999999754
No 20
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=2.6e-41 Score=380.19 Aligned_cols=260 Identities=25% Similarity=0.431 Sum_probs=212.2
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.++||+|+||+||+|.+ .+..+|+|+....... ..+. +.+|+.++++++||||+++++++...+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP----KKEL----IINEILVMRENKNPNIVNYLDSYLVGD 90 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS----CHHH----HHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc----HHHH----HHHHHHHHhcCCCCCCCeEeEEEEECC
Confidence 45799999999999999999986 5677888886544321 1222 378999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 91 --------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~ 150 (297)
T 3fxz_A 91 --------------ELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150 (297)
T ss_dssp --------------EEEEEEECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC
Confidence 34999999999999999976 3589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 151 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el 209 (297)
T 3fxz_A 151 MD-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEM 209 (297)
T ss_dssp TT-------CCEEECCCTTCEECCSTTC----------CBCCCCSCGGGCCHHHHHC----SCBCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeCCCceecCCccc----------ccCCccCCcCccChhhhcC----CCCCcHHHHHHHHHHHHHH
Confidence 87 7899999999876543211 1224569999999999876 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||.+.........+.....+.... ....++.+.+++.+||+.||++|||+
T Consensus 210 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~dp~~Rps~ 264 (297)
T 3fxz_A 210 IEGEPPYLNENPLRALYLIATNGTPELQN-------------------------PEKLSAIFRDFLNRCLEMDVEKRGSA 264 (297)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHHCSCCCSC-------------------------GGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCCC-------------------------ccccCHHHHHHHHHHccCChhHCcCH
Confidence 99999998877766555543332222110 11456679999999999999999999
Q ss_pred HHHHHHHHhhcCCCCC
Q 001142 1124 GDLYEMFVARTSSSIS 1139 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss~~s 1139 (1142)
.|+++|+|++...+.+
T Consensus 265 ~ell~h~~~~~~~~~~ 280 (297)
T 3fxz_A 265 KELLQHQFLKIAKPLS 280 (297)
T ss_dssp HHHTTCGGGGGCCCGG
T ss_pred HHHhhChhhcccCccc
Confidence 9999999999765543
No 21
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.9e-41 Score=384.28 Aligned_cols=258 Identities=24% Similarity=0.350 Sum_probs=213.0
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
..+.+|++.+.||+|+||.||+|++ .+..||+|+.... .......+.+ .+|+.++++++||||+++++++.+
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~E~~~l~~l~hpnIv~l~~~~~~ 85 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKT--QLNPTSLQKL----FREVRIMKILNHPNIVKLFEVIET 85 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGG--GSCHHHHHHH----HHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhh--cCCHHHHHHH----HHHHHHHHhCCCCCEeeEEEEEEE
Confidence 3467899999999999999999998 5678888886433 2233333333 799999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+ ..++||||+++++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 86 ~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIl 146 (328)
T 3fe3_A 86 EK--------------TLYLIMEYASGGEVFDYLVAH-----GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLL 146 (328)
T ss_dssp SS--------------EEEEEECCCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred CC--------------EEEEEEECCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEE
Confidence 55 359999999999999999762 46999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||++........ .....||+.|+|||++.+. ...+.++|||||||++|
T Consensus 147 l~~~-------~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~ 205 (328)
T 3fe3_A 147 LDAD-------MNIKIADFGFSNEFTVGGK-----------LDAFCGAPPYAAPELFQGK---KYDGPEVDVWSLGVILY 205 (328)
T ss_dssp ECTT-------SCEEECSTTCCGGGSSSCG-----------GGTTSSSGGGCCHHHHHTC---CCCSHHHHHHHHHHHHH
T ss_pred EcCC-------CCEEEeeccCceecCCCCc-----------cccccCCcceeCcccccCC---CcCCchhhhhhhHHHHH
Confidence 9887 7899999999975543211 1244699999999999762 23358999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|++|+.||.+.+..++...+..+.... + ...++.+.+|+.+||+.||.+||
T Consensus 206 ell~g~~pf~~~~~~~~~~~i~~~~~~~-p---------------------------~~~s~~~~~li~~~L~~dP~~R~ 257 (328)
T 3fe3_A 206 TLVSGSLPFDGQNLKELRERVLRGKYRI-P---------------------------FYMSTDCENLLKRFLVLNPIKRG 257 (328)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHCCCCC-C---------------------------TTSCHHHHHHHHHHCCSSTTTSC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCC-C---------------------------CCCCHHHHHHHHHHCCCChhHCc
Confidence 9999999999988887777775543211 1 03456689999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|++|+++|+|+...
T Consensus 258 t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 258 TLEQIMKDRWINAG 271 (328)
T ss_dssp CHHHHTTCTTTTTT
T ss_pred CHHHHhcCHhhcCC
Confidence 99999999999754
No 22
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=383.42 Aligned_cols=257 Identities=21% Similarity=0.295 Sum_probs=204.5
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||+||+|++ .+..||+|+...... . ...+. +.+|+.++++++||||+++++++.+.+
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~--~-~~~~~----~~~Ei~~l~~l~hpnIv~l~~~~~~~~ 81 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--G-SDLPR----IKTEIEALKNLRHQHICQLYHVLETAN 81 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CCH----HHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEcccc--c-hHHHH----HHHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence 46799999999999999999997 567788888643321 1 22223 379999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 82 --------------~~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~ 142 (347)
T 3zgw_A 82 --------------KIFMVLEYCPGGELFDYIIS-----QDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD 142 (347)
T ss_dssp --------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC
T ss_pred --------------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEc
Confidence 35999999999999999976 24699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++........ .......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 143 ~~-------~~~kL~DFG~a~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlG~il~el 203 (347)
T 3zgw_A 143 EY-------HKLKLIDFGLCAKPKGNKD---------YHLQTCCGSLAYAAPELIQG---KSYLGSEADVWSMGILLYVL 203 (347)
T ss_dssp TT-------SCEEECCCTTCBC-----------------------CGGGCCHHHHTT---C---CCHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEeccCcccccCCCC---------ccccccCCccCccCHHHHcC---CCCCCcHhHHHHHHHHHHHH
Confidence 87 7899999999875432111 11234569999999999976 22348999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..||.+.+..+....+..+.... + ...++.+.+|+.+||+.||.+|||+
T Consensus 204 l~g~~Pf~~~~~~~~~~~i~~~~~~~-p---------------------------~~~s~~~~~li~~~L~~dP~~Rps~ 255 (347)
T 3zgw_A 204 MCGFLPFDDDNVMALYKKIMRGKYDV-P---------------------------KWLSPSSILLLQQMLQVDPKKRISM 255 (347)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHTCCCC-C---------------------------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HHCCCCCCCCCHHHHHHHHHcCCCCC-C---------------------------CCCCHHHHHHHHHHcccCHhHCcCH
Confidence 99999999888887777776544321 1 0345568899999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
+|+++|+|+...
T Consensus 256 ~eil~hp~~~~~ 267 (347)
T 3zgw_A 256 KNLLNHPWIMQD 267 (347)
T ss_dssp HHHHTCHHHHTT
T ss_pred HHHhcCcchhcC
Confidence 999999999764
No 23
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.8e-40 Score=378.16 Aligned_cols=259 Identities=21% Similarity=0.277 Sum_probs=211.8
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||+||+|.+. +..+|+|+.... ...... +.+|+.+++.++||||+++++++.+.+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~----~~~E~~~l~~l~hpnIv~~~~~~~~~~ 74 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVL----VKKEISILNIARHRNILHLHESFESME 74 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHH----HHHHHHHHHHSCCTTBCCEEEEEEETT
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHH----HHHHHHHHHhCCCCCCCeEeEEEecCC
Confidence 457999999999999999999985 566777775422 222233 379999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 75 --------------~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~ 136 (321)
T 1tki_A 75 --------------ELVMIFEFISGLDIFERINT----SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQ 136 (321)
T ss_dssp --------------EEEEEECCCCCCBHHHHHTS----SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred --------------EEEEEEEeCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc
Confidence 35999999999999999854 234699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+. .+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 137 ~~~-----~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l 196 (321)
T 1tki_A 137 TRR-----SSTIKIIEFGQARQLKPGDN-----------FRLLFTAPEYYAPEVHQH----DVVSTATDMWSLGTLVYVL 196 (321)
T ss_dssp SSS-----CCCEEECCCTTCEECCTTCE-----------EEEEESCGGGSCHHHHTT----CEECHHHHHHHHHHHHHHH
T ss_pred cCC-----CCCEEEEECCCCeECCCCCc-----------cccccCChhhcCcHHhcC----CCCCchhhHHHHHHHHHHH
Confidence 631 17899999999976543211 123468999999999876 4578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..||.+....+....+...........+ ...++.+.+++.+||..||.+|||+
T Consensus 197 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~Rpt~ 252 (321)
T 1tki_A 197 LSGINPFLAETNQQIIENIMNAEYTFDEEAF------------------------KEISIEAMDFVDRLLVKERKSRMTA 252 (321)
T ss_dssp HHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH------------------------TTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HhCCCCCcCCCHHHHHHHHHcCCCCCChhhh------------------------ccCCHHHHHHHHHHcCCChhHCcCH
Confidence 9999999988887777777655433222111 1456679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.|+++|+|++..
T Consensus 253 ~e~l~hp~~~~~ 264 (321)
T 1tki_A 253 SEALQHPWLKQK 264 (321)
T ss_dssp HHHHHSHHHHSC
T ss_pred HHHhcChhhccC
Confidence 999999999864
No 24
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.6e-40 Score=385.15 Aligned_cols=265 Identities=22% Similarity=0.276 Sum_probs=212.5
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+.|++.+.||+|+||+||+|++. +..+|+|+........... ......+.+|+.++++++||||+++++++.+..
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~- 88 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR--GVCREEIEREVSILRQVLHPNIITLHDVYENRT- 88 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSS--SBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccc--hhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC-
Confidence 45999999999999999999984 6778999865443221110 001123479999999999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||++|++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 89 -------------~~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~ 150 (361)
T 2yab_A 89 -------------DVVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150 (361)
T ss_dssp -------------EEEEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred -------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeC
Confidence 45999999999999999864 357999999999999999999999999999999999999976
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
++. ....+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 151 ~~~---~~~~vkl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~~ll 212 (361)
T 2yab_A 151 KNI---PIPHIKLIDFGLAHEIEDGV-----------EFKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYILL 212 (361)
T ss_dssp TTS---SSCCEEECCCSSCEECCTTC-----------CCCCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CCC---CccCEEEEecCCceEcCCCC-----------ccccCCCCccEECchHHcC----CCCCccccHHHHHHHHHHHH
Confidence 520 11279999999997654321 1124469999999999875 56899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|..||.+.+..+....+..+........+ ...++.+.+||.+||..||.+|||+.
T Consensus 213 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dP~~R~t~~ 268 (361)
T 2yab_A 213 SGASPFLGDTKQETLANITAVSYDFDEEFF------------------------SQTSELAKDFIRKLLVKETRKRLTIQ 268 (361)
T ss_dssp HSCCSSCCSSHHHHHHHHHTTCCCCCHHHH------------------------TTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHhcCCCCCchhc------------------------cCCCHHHHHHHHHHCCCChhHCcCHH
Confidence 999999988888777777655432211111 14566799999999999999999999
Q ss_pred HHHHHHHhhc
Q 001142 1125 DLYEMFVART 1134 (1142)
Q Consensus 1125 EVL~~L~~~~ 1134 (1142)
|+++|+|+..
T Consensus 269 e~l~hp~~~~ 278 (361)
T 2yab_A 269 EALRHPWITP 278 (361)
T ss_dssp HHHTSTTTSC
T ss_pred HHhcCcCcCC
Confidence 9999999974
No 25
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=383.49 Aligned_cols=260 Identities=24% Similarity=0.296 Sum_probs=208.1
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 879 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~ 879 (1142)
...+++|++.++||+|+||.||+|++. +..+|+|+.+... .........+.+|..++..+ +||||+++++++
T Consensus 19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~-----~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~ 93 (353)
T 3txo_A 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV-----ILQDDDVECTMTEKRILSLARNHPFLTQLFCCF 93 (353)
T ss_dssp ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHH-----hcchhHHHHHHHHHHHHHhccCCCceeeEEEEE
Confidence 456789999999999999999999984 6678888865321 11111123347899999988 699999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.+ ..|+||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 94 ~~~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N 154 (353)
T 3txo_A 94 QTPD--------------RLFFVMEFVNGGDLMFHIQK-----SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDN 154 (353)
T ss_dssp ECSS--------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred EeCC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHH
Confidence 8755 35999999999999999976 2469999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||+|+...... ......+||+.|+|||++.+ ..|+.++|||||||+
T Consensus 155 ILl~~~-------g~ikL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 213 (353)
T 3txo_A 155 VLLDHE-------GHCKLADFGMCKEGICNG----------VTTATFCGTPDYIAPEILQE----MLYGPAVDWWAMGVL 213 (353)
T ss_dssp EEECTT-------SCEEECCCTTCBCSCC-------------------CCGGGCCHHHHHH----HHCTTHHHHHHHHHH
T ss_pred EEECCC-------CCEEEccccceeecccCC----------ccccccCCCcCeEChhhcCC----CCcCCccCCCcchHH
Confidence 999887 789999999997532211 11234579999999999976 468899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|||++|+.||.+.+..++...+....... + ...++.+.++|.+||+.||.+
T Consensus 214 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~~-p---------------------------~~~~~~~~~li~~lL~~dP~~ 265 (353)
T 3txo_A 214 LYEMLCGHAPFEAENEDDLFEAILNDEVVY-P---------------------------TWLHEDATGILKSFMTKNPTM 265 (353)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-C---------------------------TTSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-C---------------------------CCCCHHHHHHHHHHhhhCHHH
Confidence 999999999999988888887776543211 1 034556899999999999999
Q ss_pred CCCH------HHHHHHHHhhcC
Q 001142 1120 RPTA------GDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa------~EVL~~L~~~~s 1135 (1142)
||++ .|+++|+|++.-
T Consensus 266 R~~~~~~~~~~~il~hp~f~~~ 287 (353)
T 3txo_A 266 RLGSLTQGGEHAILRHPFFKEI 287 (353)
T ss_dssp STTSGGGTCTHHHHTSGGGTTC
T ss_pred ccCCcccCCHHHHhhCCcccCC
Confidence 9999 999999999753
No 26
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.2e-40 Score=378.08 Aligned_cols=258 Identities=22% Similarity=0.313 Sum_probs=210.7
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
++++|++.+.||+|+||.||+|++. +..+|+|+...... ........+.+|+.++++++||||+++++++.+.
T Consensus 3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 77 (337)
T 1o6l_A 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-----IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH 77 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS
T ss_pred ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-----hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC
Confidence 4678999999999999999999984 67788888643211 0111122347899999999999999999999875
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+ ..++||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 78 ~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll 138 (337)
T 1o6l_A 78 D--------------RLCFVMEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138 (337)
T ss_dssp S--------------EEEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE
T ss_pred C--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE
Confidence 5 35999999999999999976 2468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++||
T Consensus 139 ~~~-------g~vkL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~e 197 (337)
T 1o6l_A 139 DKD-------GHIKITDFGLCKEGISDG----------ATMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYE 197 (337)
T ss_dssp CTT-------SCEEECCCTTCBCSCCTT----------CCBCCCEECGGGCCGGGGSS----SCBCTTHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeeccchhhcccCC----------CcccccccChhhCChhhhcC----CCCCchhhcccchhHHHH
Confidence 887 789999999997532211 11224579999999999875 568899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP- 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP- 1121 (1142)
|++|+.||.+.+..++...+...... ++ ...++.+.++|.+||+.||.+||
T Consensus 198 ll~g~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~dP~~R~g 249 (337)
T 1o6l_A 198 MMCGRLPFYNQDHERLFELILMEEIR-FP---------------------------RTLSPEAKSLLAGLLKKDPKQRLG 249 (337)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred HhcCCCCCCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHHHhcC
Confidence 99999999988777777666543221 11 03456799999999999999999
Q ss_pred ----CHHHHHHHHHhhcC
Q 001142 1122 ----TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 ----Sa~EVL~~L~~~~s 1135 (1142)
+++|+++|+|+..-
T Consensus 250 ~~~~~~~ei~~h~~f~~~ 267 (337)
T 1o6l_A 250 GGPSDAKEVMEHRFFLSI 267 (337)
T ss_dssp CSTTTHHHHHTSGGGTTC
T ss_pred CCCCCHHHHHcCCCcCCC
Confidence 99999999999643
No 27
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=5.5e-40 Score=371.87 Aligned_cols=289 Identities=19% Similarity=0.226 Sum_probs=208.2
Q ss_pred CCCCCcceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.-.++|++.++||+|+||+||+|++ .+..+|+|+...... ... ....+.+|+.++++++||||+++++++.+.
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~--~~~----~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 91 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAE--DEG----IPSTAIREISLLKELHHPNIVSLIDVIHSE 91 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC--------C----HHHHHHHHHHHHHHCCCTTBCCEEEEECCS
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccc--cch----hhHHHHHHHHHHHHcCCCCEeeeeeEEccC
Confidence 3457899999999999999999998 567788888653321 111 122347999999999999999999999765
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ..++||||++ ++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 92 ~--------------~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~ 152 (311)
T 3niz_A 92 R--------------CLTLVFEFME-KDLKKVLDE----NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI 152 (311)
T ss_dssp S--------------CEEEEEECCS-EEHHHHHHT----CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred C--------------EEEEEEcCCC-CCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE
Confidence 5 3499999998 688888764 23469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+++....... ......||+.|+|||++.+ ...++.++|||||||++|+
T Consensus 153 ~~~-------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~ 212 (311)
T 3niz_A 153 NSD-------GALKLADFGLARAFGIPVR----------SYTHEVVTLWYRAPDVLMG---SKKYSTSVDIWSIGCIFAE 212 (311)
T ss_dssp CTT-------CCEEECCCTTCEETTSCCC-------------CCCCCCTTCCHHHHTT---CCSCCTHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEccCcCceecCCCcc----------cccCCcccCCcCCHHHhcC---CCCCCchHHhHHHHHHHHH
Confidence 887 7899999999976543211 1123468999999999865 2467899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccc--ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE--HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|++|+.||.+....+....+........+..+........ ...................++++.+||.+||+.||.+|
T Consensus 213 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 292 (311)
T 3niz_A 213 MITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKR 292 (311)
T ss_dssp HHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTS
T ss_pred HHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHC
Confidence 9999999987665554444422111111111110000000 00000000000011112456789999999999999999
Q ss_pred CCHHHHHHHHHhhcCCC
Q 001142 1121 PTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ss~ 1137 (1142)
||++|+++|+|++.-.+
T Consensus 293 pt~~ell~hp~f~~~~~ 309 (311)
T 3niz_A 293 ISARDAMNHPYFKDLDP 309 (311)
T ss_dssp CCHHHHHTSGGGTTSCT
T ss_pred CCHHHHhcCcccccCCc
Confidence 99999999999986543
No 28
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=9.6e-40 Score=369.93 Aligned_cols=262 Identities=28% Similarity=0.459 Sum_probs=204.7
Q ss_pred CCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
....+|++.+.||+|+||+||+|++.+..+|+|+.... .......+.+ .+|+.++++++||||+++++++.+..
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQ--DFHAERVNEF----LREVAIMKRLRHPNIVLFMGAVTQPP 107 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCC--CCSHHHHHHH----HHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred CChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCC--CCCHHHHHHH----HHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 34568999999999999999999999999999986433 2233434444 79999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL 961 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g--IvHrDLKp~NIL 961 (1142)
.. ++||||+++++|.+++.... ....+++..+..++.||+.||+|||++| |+||||||+|||
T Consensus 108 ~~--------------~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIl 171 (309)
T 3p86_A 108 NL--------------SIVTEYLSRGSLYRLLHKSG--AREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLL 171 (309)
T ss_dssp CC--------------EEEEECCTTCBHHHHHHSTT--HHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEE
T ss_pred ce--------------EEEEecCCCCcHHHHHhhcC--CCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEE
Confidence 43 99999999999999997521 1124899999999999999999999999 999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 172 l~~~-------~~~kL~Dfg~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ 230 (309)
T 3p86_A 172 VDKK-------YTVKVCDFGLSRLKASTF----------LSSKSAAGTPEWMAPEVLRD----EPSNEKSDVYSFGVILW 230 (309)
T ss_dssp ECTT-------CCEEECCCC---------------------------CCTTSCHHHHTT----CCCCTTHHHHHHHHHHH
T ss_pred EeCC-------CcEEECCCCCCccccccc----------cccccCCCCccccChhhhcC----CCCCchhhHHHHHHHHH
Confidence 9887 789999999997543211 11224569999999999876 56789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
+|++|+.||.+....+....+... .....+ ...++.+.+|+.+||+.||.+|
T Consensus 231 elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dP~~R 283 (309)
T 3p86_A 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIP---------------------------RNLNPQVAAIIEGCWTNEPWKR 283 (309)
T ss_dssp HHHHCCCTTTTSCHHHHHHHHHHSCCCCCCC---------------------------TTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC---------------------------ccCCHHHHHHHHHHccCChhhC
Confidence 999999999988777766555322 211111 1455679999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||+.++++.+.....
T Consensus 284 ps~~~ll~~L~~~~~ 298 (309)
T 3p86_A 284 PSFATIMDLLRPLIK 298 (309)
T ss_dssp CCHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHH
Confidence 999999998766544
No 29
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-40 Score=372.89 Aligned_cols=256 Identities=24% Similarity=0.324 Sum_probs=211.2
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
.++++|++.+.||+|+||.||+|++ .+..+|+|+...... ........+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 77 (318)
T 1fot_A 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-----VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD 77 (318)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC
T ss_pred CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe
Confidence 4567899999999999999999998 467788888643211 011111234789999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. ..++||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 78 ~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIl 138 (318)
T 1fot_A 78 AQ--------------QIFMIMDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENIL 138 (318)
T ss_dssp SS--------------EEEEEECCCCSCBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEE
T ss_pred CC--------------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEE
Confidence 55 45999999999999999986 346899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|
T Consensus 139 l~~~-------g~~kL~Dfg~a~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ 194 (318)
T 1fot_A 139 LDKN-------GHIKITDFGFAKYVPDV-------------TYTLCGTPDYIAPEVVST----KPYNKSIDWWSFGILIY 194 (318)
T ss_dssp ECTT-------SCEEECCCSSCEECSSC-------------BCCCCSCTTTCCHHHHTT----CCBCTTHHHHHHHHHHH
T ss_pred EcCC-------CCEEEeecCcceecCCc-------------cccccCCccccCHhHhcC----CCCCcccchhhhHHHHH
Confidence 9887 78999999999764321 123469999999999876 56889999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
||++|+.||.+.+..+....+...... .+ ...++.+.+++.+||+.||.+||
T Consensus 195 ell~g~~pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~lL~~dp~~R~ 246 (318)
T 1fot_A 195 EMLAGYTPFYDSNTMKTYEKILNAELR-FP---------------------------PFFNEDVKDLLSRLITRDLSQRL 246 (318)
T ss_dssp HHHHSSCTTCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHTCSCTTTCT
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------CCCCHHHHHHHHHHhccCHHHcC
Confidence 999999999988877777766544321 11 03456789999999999999999
Q ss_pred -----CHHHHHHHHHhhcC
Q 001142 1122 -----TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 -----Sa~EVL~~L~~~~s 1135 (1142)
+++|+++|+|++..
T Consensus 247 ~~~~~~~~~i~~hp~f~~~ 265 (318)
T 1fot_A 247 GNLQNGTEDVKNHPWFKEV 265 (318)
T ss_dssp TSSTTTTHHHHTSGGGSSC
T ss_pred CCcCCCHHHHhcCccccCC
Confidence 99999999999753
No 30
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=7.9e-40 Score=379.21 Aligned_cols=260 Identities=25% Similarity=0.316 Sum_probs=212.1
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|.+. +..+|+|+...+ .......+.+ .+|+.++++++|||||++++++.+.+
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~~----~~E~~il~~l~hpnIv~~~~~~~~~~- 101 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK--KLSARDFQKL----EREARICRKLQHPNIVRLHDSIQEES- 101 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT--TCCHHHHHHH----HHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcc--cCCHHHHHHH----HHHHHHHHhCCCCCCCeEEEEEEeCC-
Confidence 46999999999999999999984 667888886533 2233333444 79999999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 102 -------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~ 163 (362)
T 2bdw_A 102 -------------FHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 163 (362)
T ss_dssp -------------EEEEEECCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESC
T ss_pred -------------EEEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEec
Confidence 34999999999999998864 356899999999999999999999999999999999999976
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+. ..+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 164 ~~----~~~~~kl~DfG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~ll 224 (362)
T 2bdw_A 164 KA----KGAAVKLADFGLAIEVNDSE-----------AWHGFAGTPGYLSPEVLKK----DPYSKPVDIWACGVILYILL 224 (362)
T ss_dssp SS----TTCCEEECCCTTCBCCTTCC-----------SCCCSCSCTTTCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CC----CCCCEEEeecCcceEecCCc-----------ccccCCCCccccCHHHHcc----CCCCchhhHHHHHHHHHHHH
Confidence 52 12569999999997654311 1123569999999999875 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|..||.+.+..++...+..+........+ ...++.+.+||.+||+.||.+|||+.
T Consensus 225 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~R~t~~ 280 (362)
T 2bdw_A 225 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEW------------------------DTVTPEAKSLIDSMLTVNPKKRITAD 280 (362)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCCCTTGG------------------------GGSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHhCCCCCCcccc------------------------cCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 999999988877777777655432111100 14566799999999999999999999
Q ss_pred HHHHHHHhhc
Q 001142 1125 DLYEMFVART 1134 (1142)
Q Consensus 1125 EVL~~L~~~~ 1134 (1142)
|+++|+|+..
T Consensus 281 e~l~hp~~~~ 290 (362)
T 2bdw_A 281 QALKVPWICN 290 (362)
T ss_dssp HHTTSHHHHT
T ss_pred HHhcCcccCC
Confidence 9999999864
No 31
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.1e-39 Score=364.57 Aligned_cols=285 Identities=19% Similarity=0.236 Sum_probs=207.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+++|++.++||+|+||+||+|++. +..+|+|+...... .......+ .+|+.++++++||||+++++++.+.+
T Consensus 1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 74 (292)
T 3o0g_A 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD--DEGVPSSA----LREICLLKELKHKNIVRLHDVLHSDK 74 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCS--STTHHHHH----HHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCC--cCCcchHH----HHHHHHHhcCCCCCEeeEEeEEEeCC
Confidence 468999999999999999999984 56788888654432 22222333 78999999999999999999998755
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||++ ++|.+.+.. ....+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 75 --------------~~~lv~e~~~-~~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~ 135 (292)
T 3o0g_A 75 --------------KLTLVFEFCD-QDLKKYFDS----CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135 (292)
T ss_dssp --------------EEEEEEECCS-EEHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEecCC-CCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence 3599999997 577776654 235699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 136 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l 195 (292)
T 3o0g_A 136 RN-------GELKLANFGLARAFGIPVR----------CYSAEVVTLWYRPPDVLFG---AKLYSTSIDMWSAGCIFAEL 195 (292)
T ss_dssp TT-------SCEEECCCTTCEECCSCCS----------CCCSCCSCGGGCCHHHHTT---CSCCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeecccceecCCccc----------cccCCccccCCcChHHHcC---CCCcCchHHHHHHHHHHHHH
Confidence 87 7899999999976543211 1224468999999999875 23478999999999999999
Q ss_pred HhCCCC-CCCCCHHHHHHHHHhCCCCCchhHHhhhccccc-ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1044 LTLQVP-YMGLSELEIHDLIQMGKRPRLTDELEALGSCHE-HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1044 LtG~~P-f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
++|..| |.+.+..+....+...........+........ ...................++.+.+|+.+||+.||++||
T Consensus 196 ~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 275 (292)
T 3o0g_A 196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI 275 (292)
T ss_dssp TTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred HHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCC
Confidence 988777 455555555555432111111111110000000 000000000011111224667899999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|++|+++|+|+..-
T Consensus 276 t~~e~l~hp~f~~~ 289 (292)
T 3o0g_A 276 SAEEALQHPYFSDF 289 (292)
T ss_dssp CHHHHHTSGGGTTC
T ss_pred CHHHHhcCcccccC
Confidence 99999999999853
No 32
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=388.64 Aligned_cols=262 Identities=25% Similarity=0.314 Sum_probs=211.1
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||+||+|.+ .+..+|+|+...+. ......+. +.+|+.++++++|||||++++++.+.+
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~--~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~- 83 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKK--LSARDHQK----LEREARICRLLKHPNIVRLHDSISEEG- 83 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCS--CHHHHHHH----HHHHHHHHHHCCBTTBCCEEEEEECSS-
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEccc--CCHHHHHH----HHHHHHHHHhCCCcCCCeEEEEEEECC-
Confidence 4689999999999999999987 46678888765332 22233333 489999999999999999999998755
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||++||+|.+.+.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 84 -------------~~~lv~E~~~gg~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~ 145 (444)
T 3soa_A 84 -------------HHYLIFDLVTGGELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLAS 145 (444)
T ss_dssp -------------EEEEEECCCBCCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESB
T ss_pred -------------EEEEEEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEec
Confidence 34999999999999999976 356999999999999999999999999999999999999985
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+. ..+.+||+|||++........ ......||+.|+|||++.+ ..|+.++|||||||++|+|+
T Consensus 146 ~~----~~~~vkL~DFG~a~~~~~~~~----------~~~~~~gt~~Y~APE~l~~----~~~~~~~DIwSlGvilyell 207 (444)
T 3soa_A 146 KL----KGAAVKLADFGLAIEVEGEQQ----------AWFGFAGTPGYLSPEVLRK----DPYGKPVDLWACGVILYILL 207 (444)
T ss_dssp SS----TTCCEEECCCSSCBCCCTTCC----------BCCCSCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHHH
T ss_pred cC----CCCcEEEccCceeEEecCCCc----------eeecccCCcccCCHHHhcC----CCCCCccccHHHHHHHHHHH
Confidence 31 126899999999976543211 1123569999999999875 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|..||.+.+..+....+..+........+ ...++.+.+||.+||+.||.+|||+.
T Consensus 208 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dP~~Rpta~ 263 (444)
T 3soa_A 208 VGYPPFWDEDQHRLYQQIKAGAYDFPSPEW------------------------DTVTPEAKDLINKMLTINPSKRITAA 263 (444)
T ss_dssp HSSCSCCCSSHHHHHHHHHHTCCCCCTTTT------------------------TTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred hCCCCCCCccHHHHHHHHHhCCCCCCcccc------------------------ccCCHHHHHHHHHHcCCChhHCCCHH
Confidence 999999988888888777665432211100 14566799999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001142 1125 DLYEMFVARTS 1135 (1142)
Q Consensus 1125 EVL~~L~~~~s 1135 (1142)
|+++|+|+...
T Consensus 264 e~L~hp~~~~~ 274 (444)
T 3soa_A 264 EALKHPWISHR 274 (444)
T ss_dssp HHHHSCTTHHH
T ss_pred HHhcCccccCC
Confidence 99999999643
No 33
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8.7e-40 Score=373.04 Aligned_cols=261 Identities=25% Similarity=0.273 Sum_probs=203.8
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~-----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
....++|++.+.||+|+||.||+|++ .+..+|+|+............... +.+|+.++++++||||+++++
T Consensus 13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~----~~~E~~~l~~l~hp~iv~~~~ 88 (327)
T 3a62_A 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAH----TKAERNILEEVKHPFIVDLIY 88 (327)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------HHHHHHHCCCTTBCCEEE
T ss_pred CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHH----HHHHHHHHHhCCCCCccceeE
Confidence 34467899999999999999999987 466788888643221111122222 378999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
++...+. .++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||
T Consensus 89 ~~~~~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp 149 (327)
T 3a62_A 89 AFQTGGK--------------LYLILEYLSGGELFMQLER-----EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKP 149 (327)
T ss_dssp EEECSSC--------------EEEEEECCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCT
T ss_pred EEEcCCE--------------EEEEEeCCCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCH
Confidence 9987553 4999999999999999976 24689999999999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++||||||
T Consensus 150 ~Nill~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG 208 (327)
T 3a62_A 150 ENIMLNHQ-------GHVKLTDFGLCKESIHDGT----------VTHTFCGTIEYMAPEILMR----SGHNRAVDWWSLG 208 (327)
T ss_dssp TTEEECTT-------SCEEECCCSCC--------------------CTTSSCCTTSCHHHHTT----SCCCTHHHHHHHH
T ss_pred HHeEECCC-------CcEEEEeCCcccccccCCc----------cccccCCCcCccCHhhCcC----CCCCCcccchhHH
Confidence 99999887 7899999999875332110 1124469999999999875 5678999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1038 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
|++|+|++|+.||.+.+..+....+...... ++ ...++.+.+++.+||+.||
T Consensus 209 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~L~~dp 260 (327)
T 3a62_A 209 ALMYDMLTGAPPFTGENRKKTIDKILKCKLN-LP---------------------------PYLTQEARDLLKKLLKRNA 260 (327)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC-CC---------------------------TTSCHHHHHHHHHHSCSCG
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------CCCCHHHHHHHHHHHhcCH
Confidence 9999999999999988777776666543321 10 0345678999999999999
Q ss_pred CCCC-----CHHHHHHHHHhhcC
Q 001142 1118 TERP-----TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1118 ~~RP-----Sa~EVL~~L~~~~s 1135 (1142)
.+|| ++.|+++|+|++.-
T Consensus 261 ~~R~~~~~~~~~e~l~hp~f~~~ 283 (327)
T 3a62_A 261 ASRLGAGPGDAGEVQAHPFFRHI 283 (327)
T ss_dssp GGSTTSSTTTHHHHHHSGGGSSC
T ss_pred hhccCCCCCCHHHHHcCCcccCC
Confidence 9999 89999999999753
No 34
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.1e-39 Score=361.94 Aligned_cols=260 Identities=25% Similarity=0.284 Sum_probs=209.9
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
...+++|++.+.||+|+||.||+|.+. +..+|+|+.... ..........+.+|+.++++++||||+++++++.
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 79 (279)
T 3fdn_A 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-----QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFH 79 (279)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHH-----HHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred eeecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEecc-----ccchhhHHHHHHHHHHHHHcCCCCCCcchhheEe
Confidence 345778999999999999999999985 446888876422 1122223345589999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.. ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 80 ~~~--------------~~~lv~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Ni 140 (279)
T 3fdn_A 80 DAT--------------RVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENL 140 (279)
T ss_dssp CSS--------------EEEEEECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGE
T ss_pred cCC--------------EEEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhE
Confidence 654 359999999999999999762 4689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||++....... .....||+.|+|||++.+ ..++.++||||||+++
T Consensus 141 li~~~-------~~~~l~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 197 (279)
T 3fdn_A 141 LLGSA-------GELKIADFGWSVHAPSSR------------RTDLCGTLDYLPPEMIEG----RMHDEKVDLWSLGVLC 197 (279)
T ss_dssp EECTT-------SCEEECSCCEESCC--------------------CCCCTTCCHHHHTT----CCCCTTHHHHHHHHHH
T ss_pred EEcCC-------CCEEEEeccccccCCccc------------ccccCCCCCccCHhHhcc----CCCCccchhHhHHHHH
Confidence 99887 789999999885433211 123468999999999876 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|..||......+....+....... + ...++.+.+|+.+||+.||.+|
T Consensus 198 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~li~~~l~~~p~~R 249 (279)
T 3fdn_A 198 YEFLVGKPPFEANTYQETYKRISRVEFTF-P---------------------------DFVTEGARDLISRLLKHNPSQR 249 (279)
T ss_dssp HHHHHSSCTTCCSSHHHHHHHHHHTCCCC-C---------------------------TTSCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHHCCCCCCCCcHHHHHHHHHhCCCCC-C---------------------------CcCCHHHHHHHHHHhccChhhC
Confidence 99999999999877777666654433211 0 1345668999999999999999
Q ss_pred CCHHHHHHHHHhhcCCC
Q 001142 1121 PTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ss~ 1137 (1142)
||+.|+++|+|+...+.
T Consensus 250 ps~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 250 PMLREVLEHPWITANSS 266 (279)
T ss_dssp CCHHHHHHCHHHHHHCS
T ss_pred CCHHHHhhCccccCCcc
Confidence 99999999999986544
No 35
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.3e-39 Score=375.52 Aligned_cols=266 Identities=25% Similarity=0.314 Sum_probs=209.1
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCC-ChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGS-SADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+.|++.+.||+|+||+||+|.+ .+..+|+|+........ .....+. +.+|+.++++++||||+++++++.+.+
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~----~~~E~~~l~~l~hpnIv~~~~~~~~~~ 99 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTED----LKREASICHMLKHPHIVELLETYSSDG 99 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHH----HHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHH----HHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence 3599999999999999999998 46788999865432111 0111223 379999999999999999999998755
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++..... ....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 100 --------------~~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~ 164 (351)
T 3c0i_A 100 --------------MLYMVFEFMDGADLCFEIVKRAD-AGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 164 (351)
T ss_dssp --------------EEEEEEECCSSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------EEEEEEeCCCCCCHHHHHHHhcc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEe
Confidence 35999999999999988875332 234689999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+. ....+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 165 ~~~----~~~~vkl~Dfg~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l 226 (351)
T 3c0i_A 165 SKE----NSAPVKLGGFGVAIQLGESGL----------VAGGRVGTPHFMAPEVVKR----EPYGKPVDVWGCGVILFIL 226 (351)
T ss_dssp SSS----TTCCEEECCCTTCEECCTTSC----------BCCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred cCC----CCCcEEEecCcceeEecCCCe----------eecCCcCCcCccCHHHHcC----CCCCchHhhHHHHHHHHHH
Confidence 652 125699999999976543211 1123469999999999876 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||.+. ..+....+..+.....+..+ ...++.+.+||.+||+.||++|||+
T Consensus 227 l~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dP~~R~s~ 281 (351)
T 3c0i_A 227 LSGCLPFYGT-KERLFEGIIKGKYKMNPRQW------------------------SHISESAKDLVRRMLMLDPAERITV 281 (351)
T ss_dssp HHSSCSSCSS-HHHHHHHHHHTCCCCCHHHH------------------------TTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHCCCCCCCc-HHHHHHHHHcCCCCCCcccc------------------------ccCCHHHHHHHHHHCCCChhHCcCH
Confidence 9999999874 44455555444332221111 1456679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001142 1124 GDLYEMFVART 1134 (1142)
Q Consensus 1124 ~EVL~~L~~~~ 1134 (1142)
.|+++|+|+..
T Consensus 282 ~e~l~hp~~~~ 292 (351)
T 3c0i_A 282 YEALNHPWLKE 292 (351)
T ss_dssp HHHHTSHHHHT
T ss_pred HHHhcChhhcC
Confidence 99999999974
No 36
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=6.7e-40 Score=366.06 Aligned_cols=283 Identities=19% Similarity=0.244 Sum_probs=205.6
Q ss_pred CCCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+++|++.+.||+|+||+||+|++. +..+|+|+...... ... ....+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 74 (288)
T 1ob3_A 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DEG----IPSTTIREISILKELKHSNIVKLYDVIHTKKR 74 (288)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GGC----CCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC
T ss_pred CccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc--ccc----cchhHHHHHHHHHhcCCCCEeeeeeEEccCCe
Confidence 468999999999999999999984 67788887654321 111 11233789999999999999999999986553
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||++ ++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 --------------~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~ 135 (288)
T 1ob3_A 75 --------------LVLVFEHLD-QDLKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR 135 (288)
T ss_dssp --------------EEEEEECCS-EEHHHHHHT----STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred --------------EEEEEEecC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence 499999998 599998864 2346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 136 ~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l~ 195 (288)
T 1ob3_A 136 E-------GELKIADFGLARAFGIPVR----------KYTHEIVTLWYRAPDVLMG---SKKYSTTIDIWSVGCIFAEMV 195 (288)
T ss_dssp T-------SCEEECCTTHHHHHCC-------------------CCCTTCCHHHHTT---CCSCCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeECccccccCcccc----------ccccccccccccCchheeC---CCCCCcHHHHHHHHHHHHHHH
Confidence 7 7899999999976532111 1123468999999999865 245789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhccccc-ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHE-HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
+|+.||.+....+....+... ..+... .+........ ...................++.+.+|+.+||+.||++|||
T Consensus 196 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 274 (288)
T 1ob3_A 196 NGTPLFPGVSEADQLMRIFRILGTPNSK-NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT 274 (288)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCCCTT-TSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred hCCCCCCCCCHHHHHHHHHHHHCCCChh-hchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC
Confidence 999999987776655444221 111100 0000000000 0000000000001111245678999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001142 1123 AGDLYEMFVART 1134 (1142)
Q Consensus 1123 a~EVL~~L~~~~ 1134 (1142)
+.|+++|+|++.
T Consensus 275 ~~e~l~hp~f~~ 286 (288)
T 1ob3_A 275 AKQALEHAYFKE 286 (288)
T ss_dssp HHHHHTSGGGGC
T ss_pred HHHHhcCcchhh
Confidence 999999999975
No 37
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.9e-40 Score=372.81 Aligned_cols=263 Identities=22% Similarity=0.293 Sum_probs=210.6
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCCh--HHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSA--DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~--~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.|++.+.||+|+||.||+|.+. +..+|+|+.......... ...+. +.+|+.++++++||||+++++++.+..
T Consensus 12 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~~ 87 (326)
T 2y0a_A 12 YYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRED----IEREVSILKEIQHPNVITLHEVYENKT 87 (326)
T ss_dssp HEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHH----HHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred ceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHH----HHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence 5899999999999999999984 677888886544322111 11233 379999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 88 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~ 148 (326)
T 2y0a_A 88 --------------DVILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLL 148 (326)
T ss_dssp --------------EEEEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred --------------EEEEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEe
Confidence 45999999999999999864 35699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.++ .....+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 149 ~~~---~~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l 210 (326)
T 2y0a_A 149 DRN---VPKPRIKIIDFGLAHKIDFGN-----------EFKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYIL 210 (326)
T ss_dssp CSS---SSSCCEEECCCTTCEECCTTS-----------CCCCCCSCTTTCCHHHHTT----CCCCTHHHHHHHHHHHHHH
T ss_pred cCC---CCCCCEEEEECCCCeECCCCC-----------ccccccCCcCcCCceeecC----CCCCcHHHHHHHHHHHHHH
Confidence 762 011379999999997654321 1123469999999999875 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..||.+....+....+........... ....+..+.+|+.+||+.||.+|||+
T Consensus 211 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~L~~dP~~Rpt~ 266 (326)
T 2y0a_A 211 LSGASPFLGDTKQETLANVSAVNYEFEDEY------------------------FSNTSALAKDFIRRLLVKDPKKRMTI 266 (326)
T ss_dssp HHSCCSSCCSSHHHHHHHHHHTCCCCCHHH------------------------HTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred HHCcCCCCCCCHHHHHHHHHhcCCCcCccc------------------------cccCCHHHHHHHHHHccCChhhCCCH
Confidence 999999998877776666654432221111 01445678999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.|+++|+|++..
T Consensus 267 ~e~l~hp~~~~~ 278 (326)
T 2y0a_A 267 QDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHSTTTSCC
T ss_pred HHHhcCCCccCC
Confidence 999999999754
No 38
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=1.9e-39 Score=369.35 Aligned_cols=254 Identities=28% Similarity=0.467 Sum_probs=209.2
Q ss_pred cceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~ 886 (1142)
|...++||+|+||.||+|++ .+..||||+...... ...+.+ .+|+.++++++||||+++++++...+
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~~----~~E~~~l~~l~h~niv~~~~~~~~~~--- 115 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRRELL----FNEVVIMRDYQHFNVVEMYKSYLVGE--- 115 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHHH----HHHHHHHTTCCCTTBCCEEEEEEETT---
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHHH----HHHHHHHHhCCCCCcceEEEEEEECC---
Confidence 67888999999999999998 477899998654321 122233 78999999999999999999998654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 966 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~ 966 (1142)
..++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 116 -----------~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~- 177 (321)
T 2c30_A 116 -----------ELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD- 177 (321)
T ss_dssp -----------EEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT-
T ss_pred -----------EEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC-
Confidence 35999999999999998853 368999999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 967 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 967 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
+.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||+++|+|++|
T Consensus 178 ------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~~g 237 (321)
T 2c30_A 178 ------GRVKLSDFGFCAQISKDVP----------KRKSLVGTPYWMAPEVISR----SLYATEVDIWSLGIMVIEMVDG 237 (321)
T ss_dssp ------CCEEECCCTTCEECCSSSC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHS
T ss_pred ------CcEEEeeeeeeeecccCcc----------ccccccCCccccCHhhhcC----CCCCchhhHHHHHHHHHHHHhC
Confidence 7899999999976543211 1124469999999999875 5688999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001142 1047 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1126 (1142)
Q Consensus 1047 ~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EV 1126 (1142)
+.||......+....+.....+.... ....++.+.+++.+||+.||++|||+.|+
T Consensus 238 ~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~el 292 (321)
T 2c30_A 238 EPPYFSDSPVQAMKRLRDSPPPKLKN-------------------------SHKVSPVLRDFLERMLVRDPQERATAQEL 292 (321)
T ss_dssp SCTTTTSCHHHHHHHHHHSSCCCCTT-------------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCcCc-------------------------cccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 99999877777666665544332211 01445679999999999999999999999
Q ss_pred HHHHHhhcCC
Q 001142 1127 YEMFVARTSS 1136 (1142)
Q Consensus 1127 L~~L~~~~ss 1136 (1142)
++|+|+....
T Consensus 293 l~hp~~~~~~ 302 (321)
T 2c30_A 293 LDHPFLLQTG 302 (321)
T ss_dssp HTSGGGGGCC
T ss_pred hcChhhccCC
Confidence 9999998654
No 39
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.7e-39 Score=374.93 Aligned_cols=257 Identities=23% Similarity=0.289 Sum_probs=213.0
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
...+++|++.+.||+|+||.||+|++. +..+|+|+..... .........+.+|+.++++++||||+++++++.
T Consensus 37 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 111 (350)
T 1rdq_E 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK-----VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111 (350)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred CCCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHH-----hccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 345788999999999999999999984 6778888864321 111111233478999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.. ..|+||||++|++|.+++... ..+++..++.++.||+.||+|||++||+||||||+||
T Consensus 112 ~~~--------------~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NI 172 (350)
T 1rdq_E 112 DNS--------------NLYMVMEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172 (350)
T ss_dssp CSS--------------EEEEEEECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred cCC--------------EEEEEEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceE
Confidence 655 459999999999999999862 4689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++
T Consensus 173 ll~~~-------g~~kL~DFg~a~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 228 (350)
T 1rdq_E 173 LIDQQ-------GYIQVTDFGFAKRVKGR-------------TWTLCGTPEALAPEIILS----KGYNKAVDWWALGVLI 228 (350)
T ss_dssp EECTT-------SCEEECCCTTCEECSSC-------------BCCCEECGGGCCHHHHTT----CCBCTHHHHHHHHHHH
T ss_pred EECCC-------CCEEEcccccceeccCC-------------cccccCCccccCHHHhcC----CCCCCcCCEecccHhH
Confidence 99887 78999999999765321 123469999999999876 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|||++|..||.+.+..+....+..+... ++ ...++.+.++|.+||+.||.+|
T Consensus 229 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~lL~~dp~~R 280 (350)
T 1rdq_E 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR-FP---------------------------SHFSSDLKDLLRNLLQVDLTKR 280 (350)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTCCHHHHHHHHHHSCSCTTTC
T ss_pred hHHhhCCCCCCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHHhc
Confidence 9999999999988888777777654321 11 0345679999999999999999
Q ss_pred CC-----HHHHHHHHHhhcC
Q 001142 1121 PT-----AGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PS-----a~EVL~~L~~~~s 1135 (1142)
|+ ++||++|+|+...
T Consensus 281 ~~~~~~~~~ei~~h~~f~~~ 300 (350)
T 1rdq_E 281 FGNLKNGVNDIKNHKWFATT 300 (350)
T ss_dssp TTSSTTTTHHHHTSGGGTTC
T ss_pred cCCccCCHHHHHhCcCcCCC
Confidence 98 9999999999753
No 40
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=3e-39 Score=358.68 Aligned_cols=265 Identities=25% Similarity=0.301 Sum_probs=214.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||.||+|.+. +..+|+|+..... ......+.+ .+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 78 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDFQKL----EREARICRKLQHPNIVRLHDSIQEES 78 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CCHHHHHHH----HHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc--CCHHHHHHH----HHHHHHHHHcCCCCcCeEEEEEEcCC
Confidence 357999999999999999999984 6678888865442 233333444 79999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 79 --------------~~~~v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~ 139 (284)
T 3kk8_A 79 --------------FHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLA 139 (284)
T ss_dssp --------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEES
T ss_pred --------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEe
Confidence 34999999999999998876 24689999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.++ ..+.+||+|||.+........ .....||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 140 ~~~----~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 200 (284)
T 3kk8_A 140 SKA----KGAAVKLADFGLAIEVNDSEA-----------WHGFAGTPGYLSPEVLKK----DPYSKPVDIWACGVILYIL 200 (284)
T ss_dssp SSS----TTCCEEECCCTTCEECCSSCB-----------CCCSCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred cCC----CCCcEEEeeceeeEEcccCcc-----------ccCCCCCcCCcCchhhcC----CCCCcccchHHHHHHHHHH
Confidence 652 125699999999976543211 123468999999999876 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..||.+....+....+..+........ ....++.+.+++.+||+.||.+|||+
T Consensus 201 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps~ 256 (284)
T 3kk8_A 201 LVGYPPFWDEDQHRLYAQIKAGAYDYPSPE------------------------WDTVTPEAKSLIDSMLTVNPKKRITA 256 (284)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHTCCCCCTTT------------------------TTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HHCCCCCCCCchhHHHHHHHhccccCCchh------------------------hcccCHHHHHHHHHHcccChhhCCCH
Confidence 999999998887777776655433211100 01445679999999999999999999
Q ss_pred HHHHHHHHhhcCCCC
Q 001142 1124 GDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss~~ 1138 (1142)
.|+++|+|+......
T Consensus 257 ~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 257 DQALKVPWICNRERV 271 (284)
T ss_dssp HHHTTSHHHHSCCCG
T ss_pred HHHhcCccccCChhH
Confidence 999999999876544
No 41
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8.5e-40 Score=376.81 Aligned_cols=259 Identities=25% Similarity=0.321 Sum_probs=209.7
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 880 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~ 880 (1142)
..+++|++.+.||+|+||.||+|++. +..+|+|+...... ........+..|..++..+ +||||+++++++.
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~ 88 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQ 88 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh-----hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEE
Confidence 45789999999999999999999984 56788887643211 0011112336899999877 8999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+ ..|+||||++||+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 89 ~~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NI 149 (345)
T 1xjd_A 89 TKE--------------NLFFVMEYLNGGDLMYHIQS-----CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNI 149 (345)
T ss_dssp CSS--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGE
T ss_pred eCC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhE
Confidence 755 35999999999999999986 24689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||++
T Consensus 150 ll~~~-------g~vkL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 208 (345)
T 1xjd_A 150 LLDKD-------GHIKIADFGMCKENMLGD----------AKTNTFCGTPDYIAPEILLG----QKYNHSVDWWSFGVLL 208 (345)
T ss_dssp EECTT-------SCEEECCCTTCBCCCCTT----------CCBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHH
T ss_pred EECCC-------CCEEEeEChhhhhcccCC----------CcccCCCCCcccCChhhhcC----CCCCChhhhHHHHHHH
Confidence 99887 789999999997532211 11234579999999999976 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|||++|+.||.+.+..++...+...... .+ ...++.+.++|.+||+.||.+|
T Consensus 209 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~dp~~R 260 (345)
T 1xjd_A 209 YEMLIGQSPFHGQDEEELFHSIRMDNPF-YP---------------------------RWLEKEAKDLLVKLFVREPEKR 260 (345)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHHhcCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------cccCHHHHHHHHHHhcCCHhHc
Confidence 9999999999988887777777554321 11 0345678999999999999999
Q ss_pred CCHH-HHHHHHHhhcC
Q 001142 1121 PTAG-DLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~-EVL~~L~~~~s 1135 (1142)
|++. ++++|+|++.-
T Consensus 261 ~~~~~~i~~hp~f~~~ 276 (345)
T 1xjd_A 261 LGVRGDIRQHPLFREI 276 (345)
T ss_dssp BTTBSCGGGSGGGTTC
T ss_pred CCChHHHHcCccccCC
Confidence 9998 99999999753
No 42
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.5e-39 Score=371.44 Aligned_cols=261 Identities=22% Similarity=0.352 Sum_probs=206.6
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeee
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGH 878 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~ 878 (1142)
.+..+.+|++.+.||+|+||.||+|++. +..+|+|+...... ......+. +.+|+.++.++ +||||++++++
T Consensus 4 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~----~~~E~~~l~~~~~hp~iv~l~~~ 78 (345)
T 3a8x_A 4 DPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDIDW----VQTEKHVFEQASNHPFLVGLHSC 78 (345)
T ss_dssp CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHHH----HHHHHHHHHHTTTCTTBCCEEEE
T ss_pred CCCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHHH----HHHHHHHHHhcCCCCccCeEEEE
Confidence 3456788999999999999999999985 56788887653322 12222333 37899999988 79999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
+.+.. ..|+||||+++|+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+
T Consensus 79 ~~~~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~ 139 (345)
T 3a8x_A 79 FQTES--------------RLFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 139 (345)
T ss_dssp EECSS--------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGG
T ss_pred EEeCC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHH
Confidence 98655 45999999999999999976 246999999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||++.+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||
T Consensus 140 NIll~~~-------g~~kL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~ 198 (345)
T 3a8x_A 140 NVLLDSE-------GHIKLTDYGMCKEGLRPG----------DTTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGV 198 (345)
T ss_dssp GEEECTT-------SCEEECCGGGCBCSCCTT----------CCBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHH
T ss_pred HEEECCC-------CCEEEEeccccccccCCC----------CcccccCCCccccCccccCC----CCCChHHhHHHHHH
Confidence 9999887 789999999997532211 11224579999999999976 56889999999999
Q ss_pred HHHHHHhCCCCCCCC---------CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHH
Q 001142 1039 LLLELLTLQVPYMGL---------SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF 1109 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~---------~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI 1109 (1142)
++|||++|+.||... ....+...+..... .++ ...+..+.++|
T Consensus 199 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p---------------------------~~~s~~~~~li 250 (345)
T 3a8x_A 199 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIP---------------------------RSLSVKAASVL 250 (345)
T ss_dssp HHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHH
T ss_pred HHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC-CCC---------------------------CCCCHHHHHHH
Confidence 999999999999642 12223333322211 110 14456799999
Q ss_pred HHhcccCCCCCCCH------HHHHHHHHhhcC
Q 001142 1110 RRCTEENPTERPTA------GDLYEMFVARTS 1135 (1142)
Q Consensus 1110 ~~CL~~DP~~RPSa------~EVL~~L~~~~s 1135 (1142)
.+||+.||.+||++ .|+++|+|++.-
T Consensus 251 ~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~ 282 (345)
T 3a8x_A 251 KSFLNKDPKERLGCHPQTGFADIQGHPFFRNV 282 (345)
T ss_dssp HHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred HHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence 99999999999995 899999999753
No 43
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.4e-39 Score=362.45 Aligned_cols=285 Identities=22% Similarity=0.283 Sum_probs=206.5
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+++|++.++||+|+||+||+|++. +..+|+|+.... .......+. +.+|+.++++++||||+++++++.+.+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~ 75 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLES--EDDPVIKKI----ALREIRMLKQLKHPNLVNLLEVFRRKR 75 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCC--CC-HHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeecc--ccchHHHHH----HHHHHHHHHhCCCCCccchhheeecCC
Confidence 468999999999999999999985 667888875322 222222333 478999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 76 --------------~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~ 136 (311)
T 4agu_A 76 --------------RLHLVFEYCDHTVLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT 136 (311)
T ss_dssp --------------EEEEEEECCSEEHHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------eEEEEEEeCCCchHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc
Confidence 34999999999999888764 34689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||.+........ ......||+.|+|||++.+ ...++.++||||||+++|+|
T Consensus 137 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l 196 (311)
T 4agu_A 137 KH-------SVIKLCDFGFARLLTGPSD----------YYDDEVATRWYRSPELLVG---DTQYGPPVDVWAIGCVFAEL 196 (311)
T ss_dssp TT-------SCEEECCCTTCEECC----------------------GGGCCHHHHHT---CSCCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeCCCchhccCccc----------ccCCCcCCccccChHHHhc---CCCCCcchhhHHHHHHHHHH
Confidence 77 7899999999976543211 1123468999999999875 24678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccc---cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH---EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
++|+.||.+....+....+........+.......... ....................++.+.+|+.+||+.||.+|
T Consensus 197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 276 (311)
T 4agu_A 197 LSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTER 276 (311)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTS
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhc
Confidence 99999999877766555543322222221111110000 000000000000000112456779999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||++|+++|+|++.-
T Consensus 277 pt~~ell~hp~f~~~ 291 (311)
T 4agu_A 277 LTCEQLLHHPYFENI 291 (311)
T ss_dssp CCHHHHHTSGGGTTC
T ss_pred CCHHHHhcChHHHhc
Confidence 999999999999864
No 44
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=4.5e-40 Score=377.81 Aligned_cols=259 Identities=21% Similarity=0.278 Sum_probs=203.6
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
...+.+|++.+.||+|+||.||+|.+ .+..||+|+..... ....+...++.+|+.+++.++||||+++++++.
T Consensus 5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 79 (336)
T 3h4j_B 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQL-----LKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT 79 (336)
T ss_dssp CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHH-----ccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 34577899999999999999999998 56778888864221 111122234589999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.. ..++||||+ +|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 80 ~~~--------------~~~lv~E~~-~g~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NI 139 (336)
T 3h4j_B 80 TPT--------------DIVMVIEYA-GGELFDYIVE-----KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENL 139 (336)
T ss_dssp CSS--------------EEEEEECCC-CEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTE
T ss_pred eCC--------------EEEEEEECC-CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhE
Confidence 755 359999999 6899998876 24699999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||++....... ......||+.|+|||++.+. ..+++++|||||||++
T Consensus 140 ll~~~-------~~~kl~DFG~s~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il 198 (336)
T 3h4j_B 140 LLDDN-------LNVKIADFGLSNIMTDGN-----------FLKTSCGSPNYAAPEVINGK---LYAGPEVDVWSCGIVL 198 (336)
T ss_dssp EECTT-------CCEEECCSSCTBTTTTSB-----------TTCCCTTSTTTSCGGGSCCS---GGGCHHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEEEeccceeccCCc-----------ccccccCCcCcCCHHHHcCC---CCCCCccchhHHHHHH
Confidence 99887 789999999997544321 11244699999999998751 2237899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|+.||.+.........+..+. .. .+...++.+.+|+.+||+.||.+|
T Consensus 199 ~~ll~g~~Pf~~~~~~~~~~~i~~~~-------------------------~~---~p~~~s~~~~~li~~~L~~dP~~R 250 (336)
T 3h4j_B 199 YVMLVGRLPFDDEFIPNLFKKVNSCV-------------------------YV---MPDFLSPGAQSLIRRMIVADPMQR 250 (336)
T ss_dssp HHHHHSSCSSBCSSSTTCBCCCCSSC-------------------------CC---CCTTSCHHHHHHHHTTSCSSGGGS
T ss_pred HHHHhCCCCCCCccHHHHHHHHHcCC-------------------------CC---CcccCCHHHHHHHHHHcCCChhHC
Confidence 99999999997643221111110000 00 011456679999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||++|+++|+|+...
T Consensus 251 pt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 251 ITIQEIRRDPWFNVN 265 (336)
T ss_dssp CCHHHHTTCHHHHTT
T ss_pred cCHHHHHhChhhccC
Confidence 999999999999864
No 45
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2.7e-39 Score=379.32 Aligned_cols=260 Identities=21% Similarity=0.335 Sum_probs=204.1
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 879 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~ 879 (1142)
...+.+|++.++||+|+||.||+|++. +..+|+|+.+..... .....+. +.+|..++.++ +|||||++++++
T Consensus 48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~~----~~~E~~il~~~~~hp~Iv~l~~~~ 122 (396)
T 4dc2_A 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDIDW----VQTEKHVFEQASNHPFLVGLHSCF 122 (396)
T ss_dssp -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CCH----HHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHHH----HHHHHHHHHhcCCCCCcCeeEEEE
Confidence 345778999999999999999999985 556888886533221 1122222 36899999887 799999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.. ..++||||++||+|..++.. ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 123 ~~~~--------------~~~lV~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~N 183 (396)
T 4dc2_A 123 QTES--------------RLFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 183 (396)
T ss_dssp ECSS--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred EECC--------------EEEEEEEcCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHH
Confidence 8755 35999999999999999986 2469999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||+|+...... ......+||+.|+|||++.+ ..|+.++|||||||+
T Consensus 184 ILl~~~-------g~ikL~DFGla~~~~~~~----------~~~~~~~gt~~Y~aPE~l~~----~~~~~~~DiwslGvl 242 (396)
T 4dc2_A 184 VLLDSE-------GHIKLTDYGMCKEGLRPG----------DTTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGVL 242 (396)
T ss_dssp EEECTT-------SCEEECCCTTCBCCCCTT----------CCBCCCCBCGGGCCHHHHTT----CCBCTHHHHHHHHHH
T ss_pred EEECCC-------CCEEEeecceeeecccCC----------CccccccCCcccCCchhhcC----CCCChHHHHHHHHHH
Confidence 999887 889999999997532211 11234579999999999976 568999999999999
Q ss_pred HHHHHhCCCCCCCCC---------HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHH
Q 001142 1040 LLELLTLQVPYMGLS---------ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFR 1110 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~---------~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~ 1110 (1142)
+|||++|+.||.... ...+...+..... .++ ...++.+.+||.
T Consensus 243 lyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p---------------------------~~~s~~~~~li~ 294 (396)
T 4dc2_A 243 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIP---------------------------RSLSVKAASVLK 294 (396)
T ss_dssp HHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHHH
T ss_pred HHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc-CCC---------------------------CcCCHHHHHHHH
Confidence 999999999996422 1223333332211 111 134567999999
Q ss_pred HhcccCCCCCCCH------HHHHHHHHhhcC
Q 001142 1111 RCTEENPTERPTA------GDLYEMFVARTS 1135 (1142)
Q Consensus 1111 ~CL~~DP~~RPSa------~EVL~~L~~~~s 1135 (1142)
+||+.||.+||++ +||++|+|++.-
T Consensus 295 ~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i 325 (396)
T 4dc2_A 295 SFLNKDPKERLGCHPQTGFADIQGHPFFRNV 325 (396)
T ss_dssp HHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred HHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence 9999999999985 899999999753
No 46
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.1e-39 Score=356.69 Aligned_cols=262 Identities=24% Similarity=0.293 Sum_probs=209.0
Q ss_pred CCcceeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|.+... .+|+|+..... .. ..+.+ .+|+.++++++||||+++++++.+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~--~~~~~----~~E~~~l~~l~h~~i~~~~~~~~~~~- 79 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VE--DVDRF----KQEIEIMKSLDHPNIIRLYETFEDNT- 79 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CS--CHHHH----HHHHHHHHTCCCTTBCCEEEEEECSS-
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cc--hHHHH----HHHHHHHHhCCCCCEeeEEEEEecCC-
Confidence 3589999999999999999998554 56666643221 11 12233 78999999999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+..
T Consensus 80 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~ 141 (277)
T 3f3z_A 80 -------------DIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLT 141 (277)
T ss_dssp -------------EEEEEEECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred -------------eEEEEEeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEec
Confidence 35999999999999999876 246899999999999999999999999999999999999932
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ ...+.+||+|||++....... ......||+.|+|||++.+ .++.++||||||+++|+|+
T Consensus 142 ~----~~~~~~~l~Dfg~~~~~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~~l~~l~ 201 (277)
T 3f3z_A 142 D----SPDSPLKLIDFGLAARFKPGK-----------MMRTKVGTPYYVSPQVLEG-----LYGPECDEWSAGVMMYVLL 201 (277)
T ss_dssp S----STTCCEEECCCTTCEECCTTS-----------CBCCCCSCTTTCCHHHHTT-----CBCTTHHHHHHHHHHHHHH
T ss_pred C----CCCCcEEEEecccceeccCcc-----------chhccCCCCCccChHHhcc-----cCCchhhehhHHHHHHHHH
Confidence 2 112789999999997654321 1123468999999999864 4789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|+.||......+....+..+......... ...++.+.+++.+||+.||.+|||+.
T Consensus 202 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~li~~~l~~dp~~R~s~~ 257 (277)
T 3f3z_A 202 CGYPPFSAPTDSEVMLKIREGTFTFPEKDW------------------------LNVSPQAESLIRRLLTKSPKQRITSL 257 (277)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCHHHH------------------------TTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHhCCCCCCchhh------------------------hcCCHHHHHHHHHHccCChhhCcCHH
Confidence 999999988877777776655433222111 14456799999999999999999999
Q ss_pred HHHHHHHhhcCCCCC
Q 001142 1125 DLYEMFVARTSSSIS 1139 (1142)
Q Consensus 1125 EVL~~L~~~~ss~~s 1139 (1142)
++++|+|++.....+
T Consensus 258 ~~l~h~~~~~~~~~~ 272 (277)
T 3f3z_A 258 QALEHEWFEKQLSSS 272 (277)
T ss_dssp HHTTSHHHHHHHCCS
T ss_pred HHhcCHHHhcccccc
Confidence 999999998654443
No 47
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=9.4e-39 Score=358.62 Aligned_cols=262 Identities=24% Similarity=0.319 Sum_probs=203.3
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|++ .+..+|+|+...... ......+. +.+|+.++++++||||+++++++.+.+
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~----~~~e~~~l~~l~hp~iv~~~~~~~~~~- 84 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLKR----FEREVHNSSQLSHQNIVSMIDVDEEDD- 84 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHHH----HHHHHHHHTTCCBTTBCCEEEEEECSS-
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHHH----HHHHHHHHhcCCCCCCceEEEeeeeCC-
Confidence 5799999999999999999997 466788887643321 22233333 489999999999999999999988655
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 85 -------------~~~lv~e~~~g~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~ 146 (294)
T 4eqm_A 85 -------------CYYLVMEYIEGPTLSEYIESH-----GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS 146 (294)
T ss_dssp -------------EEEEEEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred -------------eEEEEEeCCCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence 359999999999999999762 46899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++........ .......||+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 147 ~-------~~~kl~Dfg~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~~l~~ll 206 (294)
T 4eqm_A 147 N-------KTLKIFDFGIAKALSETSL---------TQTNHVLGTVQYFSPEQAKG----EATDECTDIYSIGIVLYEML 206 (294)
T ss_dssp T-------SCEEECCCSSSTTC----------------------CCSSCCHHHHHT----CCCCTTHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEeCCCccccccccc---------cccCccccCccccCHhHhcC----CCCCchHhHHHHHHHHHHHH
Confidence 7 7899999999976543211 11224469999999999876 56789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-CH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-TA 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP-Sa 1123 (1142)
+|+.||.+...............+...... ....++.+.+++.+||+.||.+|| ++
T Consensus 207 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~l~~li~~~l~~dp~~R~~~~ 263 (294)
T 4eqm_A 207 VGEPPFNGETAVSIAIKHIQDSVPNVTTDV-----------------------RKDIPQSLSNVILRATEKDKANRYKTI 263 (294)
T ss_dssp HSSCSSCSSCHHHHHHHHHSSCCCCHHHHS-----------------------CTTSCHHHHHHHHHHSCSSGGGSCSSH
T ss_pred hCCCCCCCCChHHHHHHHhhccCCCcchhc-----------------------ccCCCHHHHHHHHHHhcCCHhHccccH
Confidence 999999987776655444443333322111 014567799999999999999999 77
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
+++.+.+.....
T Consensus 264 ~~l~~~l~~~~~ 275 (294)
T 4eqm_A 264 QEMKDDLSSVLH 275 (294)
T ss_dssp HHHHHHHHTSSS
T ss_pred HHHHHHHHHHHh
Confidence 777776665433
No 48
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.4e-39 Score=383.49 Aligned_cols=265 Identities=22% Similarity=0.288 Sum_probs=211.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.++||+|+||+||+|++. +..+|+|+..... .........+.+|+.+++.++|||||++++++.+..
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~-----~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE-----MIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhh-----hhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 567999999999999999999984 5678888754211 011111123478999999999999999999998755
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
+.|+||||++||+|.++++. ..+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 143 --------------~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~ 202 (410)
T 3v8s_A 143 --------------YLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD 202 (410)
T ss_dssp --------------EEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeEC
Confidence 35999999999999999975 3589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+|+........ .....+||+.|+|||++.+......|+.++|||||||++|||
T Consensus 203 ~~-------g~ikL~DFG~a~~~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyel 266 (410)
T 3v8s_A 203 KS-------GHLKLADFGTCMKMNKEGMV---------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEM 266 (410)
T ss_dssp TT-------SCEEECCCTTCEECCTTSEE---------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeccceeEeeccCCcc---------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHH
Confidence 87 78999999999765432111 112457999999999998633223378999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--C
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE--R 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~--R 1120 (1142)
++|+.||.+.+..+....+..... ...+. ....++.+.+||.+||+.+|.+ |
T Consensus 267 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~~~~s~~~~~li~~lL~~~~~rlgR 321 (410)
T 3v8s_A 267 LVGDTPFYADSLVGTYSKIMNHKNSLTFPD-------------------------DNDISKEAKNLICAFLTDREVRLGR 321 (410)
T ss_dssp HHSSCTTCCSSHHHHHHHHHTHHHHCCCCT-------------------------TCCCCHHHHHHHHHHSSCGGGCTTS
T ss_pred HhCCCCCCCCChhhHHHHHHhccccccCCC-------------------------cccccHHHHHHHHHHccChhhhCCC
Confidence 999999998888777776643210 00000 0135567999999999999988 9
Q ss_pred CCHHHHHHHHHhhcCC
Q 001142 1121 PTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ss 1136 (1142)
|+++||++|+|++...
T Consensus 322 ~~~~ei~~Hp~f~~~~ 337 (410)
T 3v8s_A 322 NGVEEIKRHLFFKNDQ 337 (410)
T ss_dssp SCHHHHHTSGGGCCSS
T ss_pred CCHHHHhcCccccCCC
Confidence 9999999999998653
No 49
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=4.9e-39 Score=366.52 Aligned_cols=264 Identities=20% Similarity=0.328 Sum_probs=209.8
Q ss_pred CCCCcceeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
...+|++.+.||+|+||.||+|.+. +..+|+|+.... ......+.+ .+|+.++++++||||+++++++
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~ 119 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG---YTERQRRDF----LSEASIMGQFDHPNIIRLEGVV 119 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT---CCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEE
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC---CCHHHHHHH----HHHHHHHHhCCCCCCCcEEEEE
Confidence 3467999999999999999999983 234777775422 123333344 8999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.+.. ++||||+++++|.++++. ....+++..+..|+.||+.||.|||++||+||||||+|
T Consensus 120 ~~~~~~--------------~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N 181 (325)
T 3kul_A 120 TRGRLA--------------MIVTEYMENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARN 181 (325)
T ss_dssp CGGGCC--------------EEEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred EeCCcc--------------EEEeeCCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcce
Confidence 765543 999999999999999964 23469999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||+++.......... ......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 182 Ill~~~-------~~~kl~Dfg~a~~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~i 243 (325)
T 3kul_A 182 VLVDSN-------LVCKVSDFGLSRVLEDDPDAAY-------TTTGGKIPIRWTAPEAIAF----RTFSSASDVWSFGVV 243 (325)
T ss_dssp EEECTT-------CCEEECCCSSCEECC----CCE-------ECC---CCGGGSCHHHHHH----CEECHHHHHHHHHHH
T ss_pred EEECCC-------CCEEECCCCcccccccCcccee-------eccCCCCcccccCHhHhcC----CCCCcHHHHHHHHHH
Confidence 999877 7899999999986543221110 1112346788999999976 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|+|++ |..||.+....+....+..+..+..+. .+++.+.+|+.+||+.||.
T Consensus 244 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~ 296 (325)
T 3kul_A 244 MWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPM---------------------------GCPHALHQLMLDCWHKDRA 296 (325)
T ss_dssp HHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCC---------------------------CcCHHHHHHHHHHccCChh
Confidence 999999 999999888877777766554332211 4556799999999999999
Q ss_pred CCCCHHHHHHHHHhhcCCCC
Q 001142 1119 ERPTAGDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ss~~ 1138 (1142)
+|||+.+|++.+........
T Consensus 297 ~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 297 QRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp GSCCHHHHHHHHHHHHHSCC
T ss_pred hCcCHHHHHHHHHHHHhCcc
Confidence 99999999999887654443
No 50
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=3e-39 Score=363.97 Aligned_cols=291 Identities=21% Similarity=0.223 Sum_probs=207.5
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkl~g~~~ 880 (1142)
..+|++.++||+|+||+||+|++ .+..+|+|+........... .....+.+|+.+++++ +||||+++++++.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGG---GLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSS---CCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccccccc---ccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 45799999999999999999996 56788999876443211110 1111225677777666 4999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
.... ......++||||+. ++|.+++.. .....+++..+..|+.||+.||+|||++||+||||||+||
T Consensus 85 ~~~~---------~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Ni 151 (308)
T 3g33_A 85 TSRT---------DREIKVTLVFEHVD-QDLRTYLDK---APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI 151 (308)
T ss_dssp ECCS---------SSEEEEEEEEECCC-CBHHHHHHT---CCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTE
T ss_pred ccCC---------CCceeEEEEehhhh-cCHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence 6431 12335799999997 699999875 2334499999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 152 l~~~~-------~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 209 (308)
T 3g33_A 152 LVTSG-------GTVKLADFGLARIYSYQM-----------ALTPVVVTLWYRAPEVLLQ----STYATPVDMWSVGCIF 209 (308)
T ss_dssp EECTT-------SCEEECSCSCTTTSTTCC-----------CSGGGGCCCSSCCHHHHHT----SCCCSTHHHHHHHHHH
T ss_pred EEcCC-------CCEEEeeCccccccCCCc-----------ccCCccccccccCchHHcC----CCCCchHHHHHHHHHH
Confidence 99887 789999999997543211 1224568999999999976 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|+.||.+....+....+...........+....... ...................++.+.+||.+||+.||++|
T Consensus 210 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 288 (308)
T 3g33_A 210 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLP-RGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKR 288 (308)
T ss_dssp HHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSC-GGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcc-ccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccC
Confidence 99999999999888777665553221111111000000000 00000000000111112456789999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||+.|+++|+|+...
T Consensus 289 ~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 289 ISAFRALQHSYLHKD 303 (308)
T ss_dssp CCHHHHHTSTTC---
T ss_pred CCHHHHhcCccccCC
Confidence 999999999999864
No 51
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=6.6e-39 Score=372.47 Aligned_cols=262 Identities=23% Similarity=0.372 Sum_probs=208.4
Q ss_pred CCCCcceeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccc
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVE 874 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~---------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVk 874 (1142)
..++|++.+.||+|+||.||+|++. +..+|+|+.+ .. ......+.+ .+|+.+++++ +||||++
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~~----~~E~~~l~~l~~hpnIv~ 151 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DD-ATEKDLSDL----VSEMEMMKMIGKHKNIIN 151 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECC--TT-CBHHHHHHH----HHHHHHHHHSCCCTTBCC
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEec--CC-cCHHHHHHH----HHHHHHHHHhcCCCCEee
Confidence 3467999999999999999999863 2246777643 21 222333344 8999999999 8999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHH
Q 001142 875 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALV 943 (1142)
Q Consensus 875 l~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----------~~~~ls~~~i~~Ia~qIa~gL~ 943 (1142)
+++++.+.+.+ |+||||+++|+|.+++...... ....+++..+..++.||+.||+
T Consensus 152 ~~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 217 (370)
T 2psq_A 152 LLGACTQDGPL--------------YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGME 217 (370)
T ss_dssp EEEEECSSSSC--------------EEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCE--------------EEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 99999876544 9999999999999999863211 1235899999999999999999
Q ss_pred HHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001142 944 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1023 (1142)
Q Consensus 944 yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1023 (1142)
|||++||+||||||+|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+
T Consensus 218 ~LH~~~ivHrDlkp~NIll~~~-------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~--- 279 (370)
T 2psq_A 218 YLASQKCIHRDLAARNVLVTEN-------NVMKIADFGLARDINNIDYY--------KKTTNGRLPVKWMAPEALFD--- 279 (370)
T ss_dssp HHHHTTEECSCCCGGGEEECTT-------CCEEECCCSSCEETTCCCTT--------CTTTTTTSCGGGCCHHHHHT---
T ss_pred HHHhCCeeccccchhhEEECCC-------CCEEEccccCCcccCcccce--------ecccCCCcccceECHhHhcC---
Confidence 9999999999999999999887 78999999999765432111 11123357889999999876
Q ss_pred CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhH
Q 001142 1024 PNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1102 (1142)
Q Consensus 1024 ~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1142)
..++.++|||||||++|||++ |..||.+....++...+..+..+..+. .++
T Consensus 280 -~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~ 331 (370)
T 2psq_A 280 -RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------------------------NCT 331 (370)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT---------------------------TSC
T ss_pred -CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCC---------------------------CCC
Confidence 568999999999999999999 999999877777666665554332221 445
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1103 SFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1103 ~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
+.+.+++.+||+.||.+|||+.|+++++...
T Consensus 332 ~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 332 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 6799999999999999999999999998764
No 52
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.3e-39 Score=357.41 Aligned_cols=259 Identities=23% Similarity=0.282 Sum_probs=190.5
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
..+.+|++.+.||+|+||.||+|.+ .+..+|+|+...+.. .. .+....+.+|+.++++++||||+++++++.+
T Consensus 10 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 84 (275)
T 2eue_A 10 AHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVL--AK---SDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp CBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhc--ch---HHHHHHHHHHHHHHHhCCCCCeEEEEEEEec
Confidence 4567899999999999999999987 467788888643321 11 1122334799999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+. .++||||+ +++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 85 ~~~--------------~~lv~e~~-~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil 144 (275)
T 2eue_A 85 KDE--------------IIMVIEYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL 144 (275)
T ss_dssp SSC--------------EEEEEECC-CEEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEE
T ss_pred CCe--------------EEEEehhc-CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEE
Confidence 553 49999999 6888888865 346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||++....... ......||+.|+|||++.+. ..++.++||||||+++|
T Consensus 145 ~~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~t~~y~aPE~~~~~---~~~~~~~Di~slG~il~ 203 (275)
T 2eue_A 145 LDEH-------LNVKIADFGLSNIMTDGN-----------FLKTSCGSPNYAAPEVISGK---LYAGPEVDVWSCGVILY 203 (275)
T ss_dssp ECTT-------SCEEECCSSCC--------------------------CTTCCHHHHCC--------THHHHHHHHHHHH
T ss_pred ECCC-------CCEEEeecccceeccCcc-----------cccCCCCCcCcCCceeeeCC---CCCCcccchHHHHHHHH
Confidence 9887 789999999997543321 11234589999999998751 23468999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|++|+.||.+.........+..+.... + ...++.+.+++.+||+.||.+||
T Consensus 204 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~li~~~l~~dP~~Rp 255 (275)
T 2eue_A 204 VMLCRRLPFDDESIPVLFKNISNGVYTL-P---------------------------KFLSPGAAGLIKRMLIVNPLNRI 255 (275)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHTCCCC-C---------------------------TTSCHHHHHHHHHHSCSSGGGSC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCC-C---------------------------ccCCHHHHHHHHHHhhcCHhHCC
Confidence 9999999999877777666665443211 0 03456689999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001142 1122 TAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ss 1136 (1142)
|+.|+++|+|++...
T Consensus 256 s~~e~l~h~~f~~~~ 270 (275)
T 2eue_A 256 SIHEIMQDDWFKVDL 270 (275)
T ss_dssp CHHHHTTCHHHHTTC
T ss_pred CHHHHhhCCeecccc
Confidence 999999999998653
No 53
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.3e-39 Score=371.12 Aligned_cols=261 Identities=24% Similarity=0.278 Sum_probs=203.4
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.+++|++.+.||+|+||+||+|.+. +..+|+|+...+.. ....+. +.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~----~~~E~~~l~~l~hpnIv~~~~~~~~~ 77 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPEN----IKKEICINKMLNHENVVKFYGHRREG 77 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----------C----HHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc---cchHHH----HHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 3578999999999999999999984 67788888654321 111223 37899999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+ ..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 78 ~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll 138 (323)
T 3tki_A 78 N--------------IQYLFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138 (323)
T ss_dssp S--------------EEEEEEECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred C--------------eEEEEEEcCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE
Confidence 5 34999999999999988854 3569999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||++..+...... .......||+.|+|||++.+ ...++.++|||||||++|+
T Consensus 139 ~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~~ 200 (323)
T 3tki_A 139 DER-------DNLKISDFGLATVFRYNNRE--------RLLNKMCGTLPYVAPELLKR---REFHAEPVDVWSCGIVLTA 200 (323)
T ss_dssp CTT-------CCEEECCCTTCEECEETTEE--------CCBCSCCSCGGGSCHHHHHC---SSBCHHHHHHHHHHHHHHH
T ss_pred eCC-------CCEEEEEeeccceeccCCcc--------cccCCCccCcCccCcHHhcc---CCCCCCcccHHHHHHHHHH
Confidence 887 78999999999765432211 11124569999999999876 2334789999999999999
Q ss_pred HHhCCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++|+.||....... ............. .....++.+.+|+.+||+.||.+||
T Consensus 201 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~L~~dP~~R~ 254 (323)
T 3tki_A 201 MLAGELPWDQPSDSCQEYSDWKEKKTYLN--------------------------PWKKIDSAPLALLHKILVENPSARI 254 (323)
T ss_dssp HHHSSCSCSSSCTTSHHHHHHHTTCTTST--------------------------TGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHhCCCCCCCCchHHHHHHHHhcccccCC--------------------------ccccCCHHHHHHHHHHccCChhhCc
Confidence 999999997654321 2222211111000 0114566789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++|+|+...
T Consensus 255 t~~eil~h~~~~~~ 268 (323)
T 3tki_A 255 TIPDIKKDRWYNKP 268 (323)
T ss_dssp CHHHHTTCTTTTCC
T ss_pred CHHHHhhChhhccc
Confidence 99999999999754
No 54
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.1e-39 Score=371.46 Aligned_cols=259 Identities=24% Similarity=0.291 Sum_probs=209.2
Q ss_pred CCCCCCcceeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 879 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~ 879 (1142)
...+.+|++.+.||+|+||.||+|++.. ..+|+|+...... ........+..|..++..+ +||||+++++++
T Consensus 16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~ 90 (353)
T 2i0e_A 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCF 90 (353)
T ss_dssp ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE
T ss_pred CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE
Confidence 4567899999999999999999999864 5678887543211 0111122347899999988 799999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.+ ..|+||||++||+|.+++... ..+++..++.++.||+.||+|||++||+||||||+|
T Consensus 91 ~~~~--------------~~~lv~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N 151 (353)
T 2i0e_A 91 QTMD--------------RLYFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN 151 (353)
T ss_dssp ECSS--------------EEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred EcCC--------------EEEEEEeCCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHH
Confidence 8755 459999999999999999862 469999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||+
T Consensus 152 Ill~~~-------g~vkL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 210 (353)
T 2i0e_A 152 VMLDSE-------GHIKIADFGMCKENIWDG----------VTTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVL 210 (353)
T ss_dssp EEECTT-------SCEEECCCTTCBCCCCTT----------CCBCCCCSCGGGCCHHHHTT----CCBSTHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEEeCCcccccccCC----------cccccccCCccccChhhhcC----CCcCCcccccchHHH
Confidence 999887 789999999997532211 11234579999999999876 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|||++|+.||.+.+..++...+...... .+ ...++.+.+||.+||+.||.+
T Consensus 211 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~dP~~ 262 (353)
T 2i0e_A 211 LYEMLAGQAPFEGEDEDELFQSIMEHNVA-YP---------------------------KSMSKEAVAICKGLMTKHPGK 262 (353)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHTCSCTTS
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHHH
Confidence 99999999999988888877777554321 11 034567999999999999999
Q ss_pred CC-----CHHHHHHHHHhhc
Q 001142 1120 RP-----TAGDLYEMFVART 1134 (1142)
Q Consensus 1120 RP-----Sa~EVL~~L~~~~ 1134 (1142)
|| +++++++|+|++.
T Consensus 263 R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 263 RLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp CTTCSTTHHHHHHTSGGGTT
T ss_pred cCCCCCCCHHHHhcCccccC
Confidence 99 4799999999974
No 55
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.8e-39 Score=368.69 Aligned_cols=293 Identities=20% Similarity=0.248 Sum_probs=204.7
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
...+++|++.++||+|+||+||+|.+ .+..+|+|+.... .......+.+ .+|+.++++++||||+++++++.
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~ 103 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE--HEEEGVPGTA----IREVSLLKELQHRNIIELKSVIH 103 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCC--C--------C----HHHHHHGGGCCCTTBCCEEEEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccc--ccccccchhH----HHHHHHHHHcCCCCcceEEEEEe
Confidence 44567899999999999999999987 4667777775432 2222222333 78999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.. ..++||||++ ++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+||
T Consensus 104 ~~~--------------~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NI 163 (329)
T 3gbz_A 104 HNH--------------RLHLIFEYAE-NDLKKYMDK-----NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL 163 (329)
T ss_dssp ETT--------------EEEEEEECCS-EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred cCC--------------EEEEEEecCC-CCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHE
Confidence 755 3599999998 699999976 34699999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.++ ....+.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++
T Consensus 164 ll~~~~--~~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il 228 (329)
T 3gbz_A 164 LLSVSD--ASETPVLKIGDFGLARAFGIPIR----------QFTHEIITLWYRPPEILLG---SRHYSTSVDIWSIACIW 228 (329)
T ss_dssp EEEC-------CCEEEECCTTHHHHHC---------------------CCTTCCHHHHTT---CCCCCTHHHHHHHHHHH
T ss_pred EEecCC--CCccceEEECcCCCccccCCccc----------ccCCCcCCccccCHHHhcC---CCCCCcHHHHHHHHHHH
Confidence 996441 11226799999999976543211 1123468999999999875 23578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhccccc--ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHE--HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
|+|++|+.||.+....+....+... ..+... .+........ ...................++.+.+||.+||+.||
T Consensus 229 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 307 (329)
T 3gbz_A 229 AEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDT-TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDP 307 (329)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT-TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSG
T ss_pred HHHHHCCCCcCCCCHHHHHHHHHHHhCCCchh-hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCCh
Confidence 9999999999987776655544221 111111 0000000000 00000000000001112356789999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCCC
Q 001142 1118 TERPTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~ss~ 1137 (1142)
.+|||+.|+++|+|+....+
T Consensus 308 ~~R~t~~e~l~hp~f~~~~~ 327 (329)
T 3gbz_A 308 VKRISAKNALEHPYFSHNDF 327 (329)
T ss_dssp GGSCCHHHHHTSGGGSSSCS
T ss_pred hhCCCHHHHhCCcccCCCCC
Confidence 99999999999999987643
No 56
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=5.2e-39 Score=364.62 Aligned_cols=289 Identities=21% Similarity=0.295 Sum_probs=197.8
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
+..+|++.+.||+|+||.||+|.+. +..+|+|+....... ...+. +.+|+.++++++||||+++++++.+.
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~ 75 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEE---GTPST----AIREISLMKELKHENIVRLYDVIHTE 75 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTT---CSCHH----HHHHHHHHTTCCBTTBCCEEEEECCT
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeeccccc---ccHHH----HHHHHHHHHhcCCCCcceEEEEEEEC
Confidence 3568999999999999999999874 677888886543211 11122 36899999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
+ ..++||||++ ++|.+++...... ....+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 76 ~--------------~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl 140 (317)
T 2pmi_A 76 N--------------KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLL 140 (317)
T ss_dssp T--------------EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred C--------------eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeE
Confidence 4 4599999998 6999998764321 2235899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||+++....... ......||+.|+|||++.+ ...++.++|||||||++|
T Consensus 141 ~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~ 200 (317)
T 2pmi_A 141 INKR-------GQLKLGDFGLARAFGIPVN----------TFSSEVVTLWYRAPDVLMG---SRTYSTSIDIWSCGCILA 200 (317)
T ss_dssp ECTT-------CCEEECCCSSCEETTSCCC----------CCCCCCSCCTTCCHHHHTT---CCCCCTHHHHHHHHHHHH
T ss_pred EcCC-------CCEEECcCccceecCCCcc----------cCCCCcccccccCchHhhC---CCCCCcHHHHHHHHHHHH
Confidence 9887 7899999999976543211 1123468999999999875 245789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHh--CCCCCc-hhHHhhhcccccccccccCCCCCC-----chhhhhhHHHHHHHHHHhc
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQM--GKRPRL-TDELEALGSCHEHEVAQSGSGFEK-----PEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~--~~~p~l-~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~L~dLI~~CL 1113 (1142)
+|++|+.||.+....+....+.. +..+.. ........... ...... ..... +......+..+.+|+.+||
T Consensus 201 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~li~~~L 278 (317)
T 2pmi_A 201 EMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYN-PNIQQR-PPRDLRQVLQPHTKEPLDGNLMDFLHGLL 278 (317)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCC-TTCCCC-CCCCSHHHHGGGCSSCCCHHHHHHHHHHS
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcc-cccccc-cchhHHHhhcccccccCCHHHHHHHHHHC
Confidence 99999999998877766655532 111111 00000000000 000000 00000 0001135668999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhcCCC
Q 001142 1114 EENPTERPTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~~~ss~ 1137 (1142)
+.||++|||+.|+++|+|+.....
T Consensus 279 ~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 279 QLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp CSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred CCCcccCCCHHHHhCChhhhcccc
Confidence 999999999999999999986543
No 57
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=5.6e-39 Score=354.36 Aligned_cols=256 Identities=21% Similarity=0.352 Sum_probs=209.3
Q ss_pred CCCcceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.++|++.+.||+|+||.||+|.+ .+..+|+|+.... ... .+.+ .+|+.++++++||||+++++++.+...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~---~~~~----~~E~~~l~~l~h~~i~~~~~~~~~~~~ 79 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG--AMS---EEDF----IEEAEVMMKLSHPKLVQLYGVCLEQAP 79 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT--SBC---HHHH----HHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEeccc--ccC---HHHH----HHHHHHHHhCCCCCEeeEEEEEecCCc
Confidence 45799999999999999999998 5667888876422 111 2233 789999999999999999999886553
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||+++++|.+++.. ....+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 80 --------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~ 141 (269)
T 4hcu_A 80 --------------ICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 141 (269)
T ss_dssp --------------EEEEEECCTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECG
T ss_pred --------------eEEEEEeCCCCcHHHHHHh----cCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcC
Confidence 4999999999999999965 2346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++......... ......+|+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 142 ~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~ll 201 (269)
T 4hcu_A 142 N-------QVIKVSDFGMTRFVLDDQYT---------SSTGTKFPVKWASPEVFSF----SRYSSKSDVWSFGVLMWEVF 201 (269)
T ss_dssp G-------GCEEECCTTGGGGBCCHHHH---------STTSTTCCGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEeccccccccccccccc---------cccCcccccccCCHHHhcC----CCCCchhhhHHHHHHHHHHh
Confidence 7 78999999999765432211 1123357888999999976 56889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |+.||......+....+..+..+..+. ..++.+.+++.+||+.||.+|||+
T Consensus 202 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p~~Rps~ 254 (269)
T 4hcu_A 202 SEGKIPYENRSNSEVVEDISTGFRLYKPR---------------------------LASTHVYQIMNHCWRERPEDRPAF 254 (269)
T ss_dssp TTSCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred cCCCCCCCCCCHHHHHHHHhcCccCCCCC---------------------------cCCHHHHHHHHHHccCCcccCcCH
Confidence 9 999999888877777765543322211 345669999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.++++++.....
T Consensus 255 ~~ll~~l~~l~~ 266 (269)
T 4hcu_A 255 SRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987644
No 58
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.6e-39 Score=354.76 Aligned_cols=261 Identities=25% Similarity=0.424 Sum_probs=198.8
Q ss_pred CCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+.+|++.+.||+|+||.||+|.+.+..+|+|+.+........... ..+.+|+.+++.++||||+++++++.+.+.
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTI----ENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CH----HHHHHHHHHHHHCCCTTBCCEEEEECCC--
T ss_pred chhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHH----HHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 4678999999999999999999999999999986543221111222 334799999999999999999999986553
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCCCCCee
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH---IMHRDIKSENIL 961 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g---IvHrDLKp~NIL 961 (1142)
.++||||+++++|.+++.. ..+++..+..++.||+.||.|||++| |+||||||+|||
T Consensus 81 --------------~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil 140 (271)
T 3dtc_A 81 --------------LCLVMEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL 140 (271)
T ss_dssp --------------CEEEEECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEE
T ss_pred --------------eEEEEEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEE
Confidence 3999999999999998853 46999999999999999999999999 999999999999
Q ss_pred ecccccc-CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 962 IDLERKK-ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 962 ld~~~~~-~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
++..... ....+.+||+|||.+....... .....||+.|+|||++.+ ..++.++||||||+++
T Consensus 141 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l 204 (271)
T 3dtc_A 141 ILQKVENGDLSNKILKITDFGLAREWHRTT------------KMSAAGAYAWMAPEVIRA----SMFSKGSDVWSYGVLL 204 (271)
T ss_dssp ESSCCSSSCCSSCCEEECCCCC-------------------------CCGGGSCHHHHHH----CCCSHHHHHHHHHHHH
T ss_pred EecccccccccCcceEEccCCccccccccc------------ccCCCCccceeCHHHhcc----CCCCchhhHHHHHHHH
Confidence 9863110 1113789999999997543321 113468999999999876 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCC-CchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRP-RLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+|++|+.||.+.........+...... ..+ ...++.+.+++.+||+.||.+
T Consensus 205 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~ 257 (271)
T 3dtc_A 205 WELLTGEVPFRGIDGLAVAYGVAMNKLALPIP---------------------------STCPEPFAKLMEDCWNPDPHS 257 (271)
T ss_dssp HHHHHCCCTTTTSCHHHHHHHHHTSCCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhCCCCCCCCCHHHHHHhhhcCCCCCCCC---------------------------cccCHHHHHHHHHHhcCCccc
Confidence 9999999999987766655444332211 110 144567999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001142 1120 RPTAGDLYEMFVA 1132 (1142)
Q Consensus 1120 RPSa~EVL~~L~~ 1132 (1142)
|||+.|+++++..
T Consensus 258 Rps~~e~l~~L~~ 270 (271)
T 3dtc_A 258 RPSFTNILDQLTT 270 (271)
T ss_dssp SCCHHHHHHHHHC
T ss_pred CcCHHHHHHHHhc
Confidence 9999999999853
No 59
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=7.6e-39 Score=368.63 Aligned_cols=283 Identities=19% Similarity=0.251 Sum_probs=209.1
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-----CCCccceeeeE
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-----HSCIVEMYGHK 879 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-----HpNIVkl~g~~ 879 (1142)
++|++.++||+|+||+||+|++ .+..+|+|+... .....+.+ ..|+.+++++. |||||++++++
T Consensus 35 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~~----~~e~~~l~~l~~~~~~h~~iv~~~~~~ 105 (360)
T 3llt_A 35 NAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-----IKKYTRSA----KIEADILKKIQNDDINNNNIVKYHGKF 105 (360)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CHHHHHHH----HHHHHHHHHTCCCSTTGGGBCCEEEEE
T ss_pred CEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-----chhhhhhh----HHHHHHHHHhcccCCCCCCeeccccee
Confidence 5799999999999999999998 566788887541 12222333 67999999986 99999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
...+ +.++||||+ +++|.+++.. .....+++..+..++.||+.||+|||++||+||||||+|
T Consensus 106 ~~~~--------------~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~N 167 (360)
T 3llt_A 106 MYYD--------------HMCLIFEPL-GPSLYEIITR---NNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPEN 167 (360)
T ss_dssp EETT--------------EEEEEECCC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred eECC--------------eeEEEEcCC-CCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCccc
Confidence 8654 459999999 8999999986 233458999999999999999999999999999999999
Q ss_pred eeecccccc------------------CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccc
Q 001142 960 ILIDLERKK------------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAM 1021 (1142)
Q Consensus 960 ILld~~~~~------------------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 1021 (1142)
||++..... ....+.+||+|||+++..... .....||+.|+|||++.+
T Consensus 168 Ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-------------~~~~~gt~~y~aPE~~~~- 233 (360)
T 3llt_A 168 ILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-------------HGSIINTRQYRAPEVILN- 233 (360)
T ss_dssp EEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-------------CCSCCSCGGGCCHHHHTT-
T ss_pred EEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-------------CcCccCcccccCcHHHcC-
Confidence 999752000 001278999999999753321 123468999999999976
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccccccccc------CCCC---
Q 001142 1022 HKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS------GSGF--- 1092 (1142)
Q Consensus 1022 ~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~------~~~~--- 1092 (1142)
..++.++|||||||++|+|++|+.||.+....+....+.....+.................... ....
T Consensus 234 ---~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 310 (360)
T 3llt_A 234 ---LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASS 310 (360)
T ss_dssp ---CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSC
T ss_pred ---CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccc
Confidence 5689999999999999999999999998877776666644433333222211111000000000 0000
Q ss_pred ---------CCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1093 ---------EKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1093 ---------~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
..+.......+.+.+|+.+||+.||++|||+.|+++|+|++
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 311 INSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp HHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred hhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 00111112236788999999999999999999999999985
No 60
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=5.8e-39 Score=364.99 Aligned_cols=284 Identities=21% Similarity=0.264 Sum_probs=205.1
Q ss_pred CCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
...+|++.++||+|+||+||+|++.+..||+|++... ......+ .+|+.++++++|||||++++++.....
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-----~~~~~~~----~~E~~~l~~l~hpniv~~~~~~~~~~~ 92 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQ-----DKQSWQN----EYEVYSLPGMKHENILQFIGAEKRGTS 92 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGG-----GHHHHHH----HHHHHTSTTCCCTTBCCEEEEEEEECS
T ss_pred chhhchhhheecccCceEEEEEEECCCEEEEEEeecC-----chHHHHH----HHHHHHHhcCCCCCchhhcceeccCCC
Confidence 3467999999999999999999999999999986432 1222222 579999999999999999999986432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC----------CccccC
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK----------HIMHRD 954 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~----------gIvHrD 954 (1142)
. ..+.++||||+++|+|.++++. ..+++..+..|+.||+.||.|||+. ||+|||
T Consensus 93 ~----------~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~D 156 (322)
T 3soc_A 93 V----------DVDLWLITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRD 156 (322)
T ss_dssp S----------SEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSC
T ss_pred C----------CceEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCC
Confidence 1 2356999999999999999976 3599999999999999999999999 999999
Q ss_pred CCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccC-CCCCCchhhH
Q 001142 955 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-PNLYGLEVDI 1033 (1142)
Q Consensus 955 LKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~~~~s~ksDV 1033 (1142)
|||+|||++.+ +.+||+|||+++........ .......||+.|+|||++.+... ...++.++||
T Consensus 157 lkp~Nill~~~-------~~~kL~DFg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Di 221 (322)
T 3soc_A 157 IKSKNVLLKNN-------LTACIADFGLALKFEAGKSA--------GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDM 221 (322)
T ss_dssp CSGGGEEECTT-------CCEEECCCTTCEEECTTSCC--------CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHH
T ss_pred CChHhEEECCC-------CeEEEccCCcccccccccCc--------cccccCccCccccCHhhcccccccCcCCCccchh
Confidence 99999999877 78999999999765432211 11223569999999999875211 1245678999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1034 WSYGCLLLELLTLQVPYMGLSELEIHD-LIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1034 wSLGviL~ELLtG~~Pf~~~~~~el~~-~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
|||||++|||++|+.||.+........ .......+........... ................++.+.+|+.+|
T Consensus 222 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~li~~c 295 (322)
T 3soc_A 222 YAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVH------KKKRPVLRDYWQKHAGMAMLCETIEEC 295 (322)
T ss_dssp HHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTT------SCCCCCCCGGGGSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhc------ccCCCCccccccccchHHHHHHHHHHH
Confidence 999999999999999997532210000 0000111111110000000 000000000001124567799999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhc
Q 001142 1113 TEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1113 L~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
|+.||++|||+.||++.+....
T Consensus 296 l~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 296 WDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999987653
No 61
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2e-39 Score=363.67 Aligned_cols=268 Identities=24% Similarity=0.246 Sum_probs=203.0
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCCh------------------HHHHHhHHhHHHHHHH
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSA------------------DEIRNFEYSCLGEVRM 863 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~------------------~~~~~~~~~~~~Ei~i 863 (1142)
..+++|++.+.||+|+||.||+|++ .+..+|+|+.......... .........+.+|+.+
T Consensus 10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 89 (298)
T 2zv2_A 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI 89 (298)
T ss_dssp CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence 3467899999999999999999987 4667888886533211100 0000111234799999
Q ss_pred HhhCCCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHH
Q 001142 864 LGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALV 943 (1142)
Q Consensus 864 L~~L~HpNIVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~ 943 (1142)
+++++||||+++++++.+.. ....++||||+++++|.+++. ...+++..+..++.||+.||+
T Consensus 90 l~~l~h~~iv~~~~~~~~~~------------~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~ 151 (298)
T 2zv2_A 90 LKKLDHPNVVKLVEVLDDPN------------EDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIE 151 (298)
T ss_dssp HHTCCCTTBCCEEEEEECSS------------SSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCeEEEEEEcCC------------CCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999987632 125699999999999877542 246999999999999999999
Q ss_pred HHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001142 944 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1023 (1142)
Q Consensus 944 yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1023 (1142)
|||++||+||||||+|||++.+ +.+||+|||++......... .....||+.|+|||++.+..
T Consensus 152 ~lH~~~ivH~Dlkp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~- 213 (298)
T 2zv2_A 152 YLHYQKIIHRDIKPSNLLVGED-------GHIKIADFGVSNEFKGSDAL----------LSNTVGTPAFMAPESLSETR- 213 (298)
T ss_dssp HHHHTTEECCCCCGGGEEECTT-------SCEEECCCTTCEECSSSSCE----------ECCCCSCGGGCCGGGCCTTC-
T ss_pred HHHHCCeeccCCCHHHEEECCC-------CCEEEecCCCcccccccccc----------ccCCcCCccccChhhhccCC-
Confidence 9999999999999999999887 78999999999765432111 12346999999999987521
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001142 1024 PNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1103 (1142)
Q Consensus 1024 ~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1142)
...++.++|||||||++|+|++|+.||.+.........+......... ....++
T Consensus 214 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~ 267 (298)
T 2zv2_A 214 KIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD--------------------------QPDIAE 267 (298)
T ss_dssp CCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS--------------------------SSCCCH
T ss_pred CCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCC--------------------------ccccCH
Confidence 112478999999999999999999999887766665555433211100 013456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1104 FLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1104 ~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.+.+++.+||+.||++|||+.|+++|+|+.
T Consensus 268 ~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 268 DLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 799999999999999999999999999985
No 62
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.9e-39 Score=356.32 Aligned_cols=261 Identities=22% Similarity=0.289 Sum_probs=204.2
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|.+.++||+|+||.||+|++. +..+|+|+........ ..+.+ .+|++++++++||||+++++++.+..
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~----~~E~~~l~~l~hp~iv~~~~~~~~~~- 93 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV---PMEQI----EAEIEVLKSLDHPNIIKIFEVFEDYH- 93 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS---CHHHH----HHHHHHHHTCCCTTBCCEEEEEECSS-
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccch---hHHHH----HHHHHHHHhCCCchHHhHHHheecCC-
Confidence 46999999999999999999984 5677888765433211 12233 78999999999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++...... ...+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 94 -------------~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~ 159 (285)
T 3is5_A 94 -------------NMYIVMETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQD 159 (285)
T ss_dssp -------------EEEEEECCCSCCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESS
T ss_pred -------------eEEEEEEeCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEec
Confidence 359999999999999999764332 356999999999999999999999999999999999999964
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+. ..+.+||+|||++....... ......||+.|+|||++.+ .++.++||||||+++|+|+
T Consensus 160 ~~----~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~il~~ll 219 (285)
T 3is5_A 160 TS----PHSPIKIIDFGLAELFKSDE-----------HSTNAAGTALYMAPEVFKR-----DVTFKCDIWSAGVVMYFLL 219 (285)
T ss_dssp SS----TTCCEEECCCCCCCC---------------------CTTGGGCCHHHHTT-----CCCHHHHHHHHHHHHHHHH
T ss_pred CC----CCCCEEEEeeecceecCCcc-----------cCcCcccccCcCChHHhcc-----CCCcccCeehHHHHHHHHH
Confidence 31 12679999999997544321 1123468999999999853 5789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|+.||.+....+....+.......... ....++.+.+++.+||+.||.+|||+.
T Consensus 220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~L~~dP~~Rps~~ 274 (285)
T 3is5_A 220 TGCLPFTGTSLEEVQQKATYKEPNYAVE-------------------------CRPLTPQAVDLLKQMLTKDPERRPSAA 274 (285)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCC---------------------------CCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHhhhccCCcccccc-------------------------cCcCCHHHHHHHHHHccCChhhCcCHH
Confidence 9999999877766655554332211100 002456789999999999999999999
Q ss_pred HHHHHHHhhc
Q 001142 1125 DLYEMFVART 1134 (1142)
Q Consensus 1125 EVL~~L~~~~ 1134 (1142)
|+++|+|++.
T Consensus 275 e~l~hp~f~~ 284 (285)
T 3is5_A 275 QVLHHEWFKQ 284 (285)
T ss_dssp HHHTSGGGGC
T ss_pred HHhcCHHhhc
Confidence 9999999975
No 63
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.3e-38 Score=369.24 Aligned_cols=266 Identities=25% Similarity=0.358 Sum_probs=217.1
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~ 883 (1142)
++|++.+.||+|+||.||+|++. +..||||+...............+...+.+|+.+++++ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 45899999999999999999984 77899999765544444455555666678999999999 7999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 174 --------------~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~ 234 (365)
T 2y7j_A 174 --------------FMFLVFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD 234 (365)
T ss_dssp --------------EEEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------EEEEEEEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 45999999999999999976 24689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc--CCCCCCchhhHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH--KPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~~s~ksDVwSLGviL~ 1041 (1142)
.+ +.+||+|||++..+..... .....||+.|+|||++.+.. ....++.++|||||||++|
T Consensus 235 ~~-------~~ikl~DfG~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ 296 (365)
T 2y7j_A 235 DN-------MQIRLSDFGFSCHLEPGEK-----------LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296 (365)
T ss_dssp TT-------CCEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHH
T ss_pred CC-------CCEEEEecCcccccCCCcc-----------cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHH
Confidence 87 7899999999976543211 12346999999999987532 1235789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|++|..||.+.........+..+........+ ...+..+.+++.+||+.||++||
T Consensus 297 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~Rp 352 (365)
T 2y7j_A 297 TLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW------------------------DDRSSTVKDLISRLLQVDPEARL 352 (365)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHH------------------------SSSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHHHCCCCCCCCCHHHHHHHHHhCCCCCCCccc------------------------ccCCHHHHHHHHHHcCCChhHCc
Confidence 999999999887777666666554432211111 13456799999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001142 1122 TAGDLYEMFVAR 1133 (1142)
Q Consensus 1122 Sa~EVL~~L~~~ 1133 (1142)
|+.|+++|+|++
T Consensus 353 s~~ell~hp~f~ 364 (365)
T 2y7j_A 353 TAEQALQHPFFE 364 (365)
T ss_dssp CHHHHHHSGGGC
T ss_pred CHHHHhcCcccC
Confidence 999999999986
No 64
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.5e-38 Score=359.55 Aligned_cols=269 Identities=24% Similarity=0.356 Sum_probs=205.7
Q ss_pred CCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
....+|++.++||+|+||.||+|++.+ .+++|+.+ .........+.+ .+|+.++++++||||+++++++....
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k--~~~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 105 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILK--VVDPTPEQFQAF----RNEVAVLRKTRHVNILLFMGYMTKDN 105 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESSS-EEEEEECC--CSSCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred ecccceEEEeEecCCCCeEEEEEEECC-EEEEEEEe--cCCCCHHHHHHH----HHHHHHHHhCCCCCEEEEEEEEccCc
Confidence 345689999999999999999999865 47777744 333344444444 89999999999999999999875432
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.++||||+++++|.+++.. ....+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 106 ---------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~ 166 (307)
T 3lb7_A 106 ---------------LAIVTQWCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH 166 (307)
T ss_dssp ---------------CEEEEECCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEEC
T ss_pred ---------------EEEEEecCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEc
Confidence 3899999999999999864 235799999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++......... .......||+.|+|||++... ....++.++|||||||++|||
T Consensus 167 ~~-------~~~kl~DFg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~Di~slG~il~el 230 (307)
T 3lb7_A 167 EG-------LTVKIGDFGLATVKSRWSGS--------QQVEQPTGSVLWMAPEVIRMQ-DNNPFSFQSDVYSYGIVLYEL 230 (307)
T ss_dssp TT-------SCEEECCCCSSCC--------------------CCCCTTSCCHHHHHCC-SSCCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccCCCceeccccccc--------ccccCCCCCcceECcceeecc-CCCCCCchhhHHHHHHHHHHH
Confidence 87 78999999999754321111 112234699999999998632 135688999999999999999
Q ss_pred HhCCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LTLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++|+.||.+....+ ....+..+....... .....+++.+.+++.+||+.||++|||
T Consensus 231 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~~p~~RPs 287 (307)
T 3lb7_A 231 MTGELPYSHINNRDQIIFMVGRGYASPDLS-----------------------KLYKNCPKAMKRLVADCVKKVKEERPL 287 (307)
T ss_dssp HHSSCTTTTCCCHHHHHHHHHHTCCCCCST-----------------------TSCSSSCHHHHHHHHHHSCSSSTTSCC
T ss_pred HhCCCCCccCCcHHHHHHHHhcCCCCcchh-----------------------hhhcCCcHHHHHHHHHHhhCChhhCcC
Confidence 99999998755444 333333332211100 000145677999999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001142 1123 AGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1123 a~EVL~~L~~~~ss~ 1137 (1142)
+.|++++++....+.
T Consensus 288 ~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 288 FPQILSSIELLQHSL 302 (307)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999876543
No 65
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=4e-39 Score=376.90 Aligned_cols=260 Identities=21% Similarity=0.278 Sum_probs=209.5
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.+.|++.+.||+|+||.||+|.+. +..+|+|+.... ....... +.+|+.++++++||||+++++++.+..
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~~----~~~E~~il~~l~hpnIv~~~~~~~~~~ 121 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP----YPLDKYT----VKNEISIMNQLHHPKLINLHDAFEDKY 121 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHHHH----HHHHHHHHTTCCSTTBCCEEEEEECSS
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc----chhhHHH----HHHHHHHHHhCCCcCCCeEEEEEEeCC
Confidence 457999999999999999999984 566788875422 1222233 479999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 122 --------------~~~lv~E~~~gg~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~ 183 (387)
T 1kob_A 122 --------------EMVLILEFLSGGELFDRIAA----EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCE 183 (387)
T ss_dssp --------------EEEEEEECCCCCBHHHHTTC----TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred --------------EEEEEEEcCCCCcHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEe
Confidence 45999999999999998863 234699999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+. .+.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 184 ~~~-----~~~vkL~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~el 243 (387)
T 1kob_A 184 TKK-----ASSVKIIDFGLATKLNPDEI-----------VKVTTATAEFAAPEIVDR----EPVGFYTDMWAIGVLGYVL 243 (387)
T ss_dssp STT-----CCCEEECCCTTCEECCTTSC-----------EEEECSSGGGCCHHHHTT----CCBCHHHHHHHHHHHHHHH
T ss_pred cCC-----CCceEEEecccceecCCCcc-----------eeeeccCCCccCchhccC----CCCCCcccEeeHhHHHHHH
Confidence 542 16799999999976543211 113468999999999876 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..||.+....+....+.......... .....++.+.+||.+||+.||.+|||+
T Consensus 244 ltg~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~ 299 (387)
T 1kob_A 244 LSGLSPFAGEDDLETLQNVKRCDWEFDED------------------------AFSSVSPEAKDFIKNLLQKEPRKRLTV 299 (387)
T ss_dssp HHSCCSSCCSSHHHHHHHHHHCCCCCCSS------------------------TTTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCcc------------------------ccccCCHHHHHHHHHHcCCChhHCcCH
Confidence 99999999887777666665433211100 001456679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.|+++|+|+...
T Consensus 300 ~ell~hp~~~~~ 311 (387)
T 1kob_A 300 HDALEHPWLKGD 311 (387)
T ss_dssp HHHHTSTTTSSC
T ss_pred HHHhhCccccCC
Confidence 999999999865
No 66
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=4.8e-39 Score=375.06 Aligned_cols=296 Identities=19% Similarity=0.215 Sum_probs=209.5
Q ss_pred CCCCcceeeeeccc--CceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 805 SFPSLSSCDEAGKS--VSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 805 ~~~~y~l~~~LG~G--sfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
...+|++.++||+| +||.||+|++. +..||+|+..... ......+. +.+|+.++++++|||||++++++.
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~ 96 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA--CSNEMVTF----LQGELHVSKLFNHPNIVPYRATFI 96 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc--cChHHHHH----HHHHHHHHHhCCCCCCCcEeEEEE
Confidence 35679999999999 99999999985 6778888865442 23333333 478999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+ ..++||||+++++|.+++... ....+++..+..|+.||+.||+|||++||+||||||+||
T Consensus 97 ~~~--------------~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NI 159 (389)
T 3gni_B 97 ADN--------------ELWVVTSFMAYGSAKDLICTH---FMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHI 159 (389)
T ss_dssp ETT--------------EEEEEEECCTTCBHHHHHHHT---CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred ECC--------------EEEEEEEccCCCCHHHHHhhh---cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHE
Confidence 755 359999999999999999762 234699999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||.+............ .........||+.|+|||++.+. ...++.++|||||||++
T Consensus 160 ll~~~-------~~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~DiwslG~il 227 (389)
T 3gni_B 160 LISVD-------GKVYLSGLRSNLSMISHGQRQRV---VHDFPKYSVKVLPWLSPEVLQQN--LQGYDAKSDIYSVGITA 227 (389)
T ss_dssp EECTT-------CCEEECCGGGCEECEETTEECSC---BCCCCTTCTTTGGGSCHHHHSTT--SSCBCTHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEcccccceeeccccccccc---cccccccccccccccCHHHHhcc--CCCCCcHhHHHHHHHHH
Confidence 99877 78999999998754332211100 11122345799999999998752 14688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccc---------c----cccccc-----cCCCCCCchhhhhhH
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---------H----EHEVAQ-----SGSGFEKPEAELETL 1102 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---------~----~~~~~~-----~~~~~~~~~~~~~~~ 1102 (1142)
|+|++|+.||.+....+....+..+..+............ . ...... ..............+
T Consensus 228 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 307 (389)
T 3gni_B 228 CELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFS 307 (389)
T ss_dssp HHHHHSSCTTTTCCSTTHHHHC--------------------------------------------------------CC
T ss_pred HHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccC
Confidence 9999999999876554433332222221111000000000 0 000000 000000001112456
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1103 SFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1103 ~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+.+.+||.+||+.||++|||+.|+++|+|++.-
T Consensus 308 ~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 308 PHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp HHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 789999999999999999999999999999854
No 67
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.9e-39 Score=383.06 Aligned_cols=284 Identities=17% Similarity=0.239 Sum_probs=205.5
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.++||+|+||+||+|.+. +..||+|+.... .......+. +.+|+.+++.++|||||++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~--~~~~~~~~~----~~~E~~~l~~l~hpnIv~l~~~~~~~~ 134 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP--FQNQTHAKR----AYRELVLMKCVNHKNIISLLNVFTPQK 134 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESG--GGSHHHHHH----HHHHHHHHHHCCCTTBCCCSEEECSCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECcc--ccChHHHHH----HHHHHHHHHhCCCCCCCcEEEEEccCC
Confidence 468999999999999999999884 566777775422 222233333 479999999999999999999997654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. ....+.|+||||++ ++|.+.+.. .+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 135 ~~--------~~~~~~~lv~E~~~-~~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~ 198 (464)
T 3ttj_A 135 TL--------EEFQDVYLVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198 (464)
T ss_dssp ST--------TTCCEEEEEEECCS-EEHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred cc--------ccCCeEEEEEeCCC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe
Confidence 22 12346799999997 567666632 489999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+|+...... ......||+.|+|||++.+ ..|+.++|||||||++|||
T Consensus 199 ~~-------~~~kl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~el 256 (464)
T 3ttj_A 199 SD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGEM 256 (464)
T ss_dssp TT-------SCEEECCCCCC-----CC-----------CC----CCCTTCCHHHHTT----CCCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEEEEeeeecCCCc-----------ccCCCcccccccCHHHHcC----CCCCHHHHHHHHHHHHHHH
Confidence 87 789999999997643311 1224579999999999986 5689999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCC---------------CchhhhhhHHHHHHH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE---------------KPEAELETLSFLVDV 1108 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~L~dL 1108 (1142)
++|+.||.+.+..+....+........+..+....... ........... ........++.+.+|
T Consensus 257 l~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 335 (464)
T 3ttj_A 257 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335 (464)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH-HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh-hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHH
Confidence 99999999988777666653322222221111110000 00000000000 011112336789999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
|.+||+.||.+|||++|+++|+|+..
T Consensus 336 l~~mL~~dP~~R~ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 336 LSKMLVIDPAKRISVDDALQHPYINV 361 (464)
T ss_dssp HHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred HHHHcCCChhhCCCHHHHhcChhhhh
Confidence 99999999999999999999999974
No 68
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.1e-38 Score=355.00 Aligned_cols=261 Identities=21% Similarity=0.254 Sum_probs=210.8
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
...+++|++.+.||+|+||.||+|++. +..+|+|+..... .........+.+|+.++++++||||+++++++.
T Consensus 10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 84 (284)
T 2vgo_A 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-----LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 84 (284)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred chhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccc-----cchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE
Confidence 345678999999999999999999985 4567888754221 111122334589999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+ ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 85 ~~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Ni 145 (284)
T 2vgo_A 85 DRK--------------RIYLMLEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENL 145 (284)
T ss_dssp CSS--------------EEEEEECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGE
T ss_pred cCC--------------EEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHE
Confidence 654 459999999999999999762 3689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+++.+ +.+||+|||++....... .....||+.|+|||++.+ ..++.++||||||+++
T Consensus 146 l~~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 202 (284)
T 2vgo_A 146 LMGYK-------GELKIADFGWSVHAPSLR------------RRTMCGTLDYLPPEMIEG----KTHDEKVDLWCAGVLC 202 (284)
T ss_dssp EECTT-------CCEEECCCTTCEECSSSC------------BCCCCSCGGGCCHHHHTT----CCBCTTHHHHHHHHHH
T ss_pred EEcCC-------CCEEEecccccccCcccc------------cccccCCCCcCCHHHhcc----CCCCcccchhhHHHHH
Confidence 99877 789999999986543211 123468999999999876 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|..||......+....+...... .+ ...++.+.+++.+||+.||.+|
T Consensus 203 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~~p~~R 254 (284)
T 2vgo_A 203 YEFLVGMPPFDSPSHTETHRRIVNVDLK-FP---------------------------PFLSDGSKDLISKLLRYHPPQR 254 (284)
T ss_dssp HHHHHSSCTTCCSSHHHHHHHHHTTCCC-CC---------------------------TTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHCCCCCCCCCHhHHHHHHhccccC-CC---------------------------CcCCHHHHHHHHHHhhcCHhhC
Confidence 9999999999887766665555433211 00 1345678999999999999999
Q ss_pred CCHHHHHHHHHhhcCCCC
Q 001142 1121 PTAGDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ss~~ 1138 (1142)
||+.++++|+|++.....
T Consensus 255 ps~~~ll~h~~~~~~~~~ 272 (284)
T 2vgo_A 255 LPLKGVMEHPWVKANSRR 272 (284)
T ss_dssp CCHHHHHTCHHHHHHCCC
T ss_pred CCHHHHhhCHHHHhhccc
Confidence 999999999999865443
No 69
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.3e-39 Score=366.53 Aligned_cols=276 Identities=23% Similarity=0.241 Sum_probs=207.9
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCC-CChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCG-SSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~-~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.+|++.+.||+|+||+||+|.+. +..+|+|+....... ......+ .+.+|+.++++++||||+++++++.+.+
T Consensus 26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVE----RIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHH----HHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHH----HHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 35999999999999999999984 556788876433211 1112223 3489999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-----------------------------------cCCCCCCH
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------------------------------TGEKHVSV 928 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-----------------------------------~~~~~ls~ 928 (1142)
..++||||+++++|.+++..... .....+++
T Consensus 102 --------------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (345)
T 3hko_A 102 --------------YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE 167 (345)
T ss_dssp --------------EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHH
T ss_pred --------------eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccH
Confidence 35999999999999998842111 01223467
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccC
Q 001142 929 KLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVG 1008 (1142)
Q Consensus 929 ~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~G 1008 (1142)
..+..|+.||+.||+|||++||+||||||+|||++.+.. +.+||+|||++..+...... .........|
T Consensus 168 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~-----~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~~g 236 (345)
T 3hko_A 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS-----FEIKLVDFGLSKEFYKLNNG------EYYGMTTKAG 236 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSS-----CCEEECCCTTCEEGGGTTCC--------------CC
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCC-----ceEEEeeccccccccccCcc------ccccccccCC
Confidence 889999999999999999999999999999999986521 48999999999765432211 0111224569
Q ss_pred CCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccccccccc
Q 001142 1009 TPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS 1088 (1142)
Q Consensus 1009 T~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~ 1088 (1142)
|+.|+|||++.+. ...++.++|||||||++|+|++|+.||.+....+....+..........
T Consensus 237 t~~y~aPE~~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------- 298 (345)
T 3hko_A 237 TPYFVAPEVLNTT--NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENP---------------- 298 (345)
T ss_dssp CGGGCCHHHHTCS--SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSG----------------
T ss_pred CccccCchhhccC--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCc----------------
Confidence 9999999998642 2468899999999999999999999999887777666654433221110
Q ss_pred CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 001142 1089 GSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1089 ~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ss~ 1137 (1142)
.....++.+.+||.+||+.||.+|||+.|+++|+|+..-+.
T Consensus 299 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~ 339 (345)
T 3hko_A 299 --------NYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339 (345)
T ss_dssp --------GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred --------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence 00135667999999999999999999999999999986644
No 70
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=6.6e-39 Score=373.96 Aligned_cols=293 Identities=19% Similarity=0.254 Sum_probs=201.3
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS 882 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~ 882 (1142)
..+|++.+.||+|+||.||+|.+. +..||+|+.. .........+.+ .+|+.+++++. ||||+++++++...
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~--~~~~~~~~~~~~----~~E~~~l~~l~~h~niv~l~~~~~~~ 81 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF--DAFQNSTDAQRT----FREIMILTELSGHENIVNLLNVLRAD 81 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEEC--C--CCHHHHHHH----HHHHHHHHHTTTCTTBCCEEEEEECT
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEec--ccccChHHHHHH----HHHHHHHHhccCCCCCCeeeeEEecC
Confidence 467999999999999999999884 6677887643 222233333333 79999999997 99999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+. ...|+||||++ ++|..+++. ..+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 82 ~~------------~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll 142 (388)
T 3oz6_A 82 ND------------RDVYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL 142 (388)
T ss_dssp TS------------SCEEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred CC------------CEEEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE
Confidence 31 24699999997 799999875 368999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCccccccccccccc-----------ccCCCCCCCCccCCCcccchhhhccccCCCCCCchh
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI-----------AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1031 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~-----------~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1031 (1142)
+.+ +.+||+|||+|+........... ...........+||+.|+|||++.+ ...|+.++
T Consensus 143 ~~~-------~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~ 212 (388)
T 3oz6_A 143 NAE-------CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG---STKYTKGI 212 (388)
T ss_dssp CTT-------CCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT---CCCCCTHH
T ss_pred cCC-------CCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC---CCCCCChh
Confidence 887 78999999999865331110000 0001112234579999999999875 24688999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhcccccccc----cc----cCCCCCC--ch----
Q 001142 1032 DIWSYGCLLLELLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEV----AQ----SGSGFEK--PE---- 1096 (1142)
Q Consensus 1032 DVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~----~~----~~~~~~~--~~---- 1096 (1142)
|||||||++|||++|++||.+.+..+....+.. ...|.. ..+........... .. ....... +.
T Consensus 213 DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (388)
T 3oz6_A 213 DMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSN-EDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL 291 (388)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH-HHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH-HHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhh
Confidence 999999999999999999998887776666532 222221 11111000000000 00 0000000 00
Q ss_pred -----hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1097 -----AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1097 -----~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
.....++.+.+|+.+||+.||++|||++|+++|+|+..
T Consensus 292 ~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~ 334 (388)
T 3oz6_A 292 LLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI 334 (388)
T ss_dssp HHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred cccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence 00134667999999999999999999999999999864
No 71
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=6e-39 Score=362.62 Aligned_cols=267 Identities=23% Similarity=0.270 Sum_probs=203.9
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||.||+|++ .+..+|+|+...... ...... ..+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~----~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 85 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFY----LRFRREAQNAAALNHPAIVAVYDTGEAET 85 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHH----HHHHHHHTTCCCCCCTTBCCEEEEEEEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHH----HHHHHHHHHHHcCCCCCcceEEEeeeccC
Confidence 45799999999999999999997 466788887643321 122222 33489999999999999999999987643
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. ....++||||+++++|.++++. ...+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 86 ~~----------~~~~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~ 150 (311)
T 3ork_A 86 PA----------GPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150 (311)
T ss_dssp TT----------EEEEEEEEECCCEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred CC----------CcccEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc
Confidence 21 2245999999999999999976 24689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++......... ........||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 151 ~~-------~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 212 (311)
T 3ork_A 151 AT-------NAVKVMDFGIARAIADSGNS-------VTQTAAVIGTAQYLSPEQARG----DSVDARSDVYSLGCVLYEV 212 (311)
T ss_dssp TT-------SCEEECCCSCC-------------------------CCTTCCHHHHHT----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeccCcccccccccc-------cccccccCcCcccCCHHHhcC----CCCCchHhHHHHHHHHHHH
Confidence 87 78999999999765432111 011223468999999999976 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||.+....+....+.......... .....++.+.+++.+||+.||.+||++
T Consensus 213 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~dP~~R~~~ 268 (311)
T 3ork_A 213 LTGEPPFTGDSPVSVAYQHVREDPIPPSA------------------------RHEGLSADLDAVVLKALAKNPENRYQT 268 (311)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHCCCCCHHH------------------------HSTTCCHHHHHHHHHHTCSSGGGSCSS
T ss_pred HhCCCCCCCCChHHHHHHHhcCCCCCccc------------------------ccCCCCHHHHHHHHHHHhcCHhhChhh
Confidence 99999999877766655443332221110 001456779999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001142 1124 GDLYEMFVART 1134 (1142)
Q Consensus 1124 ~EVL~~L~~~~ 1134 (1142)
.+++.+.|++.
T Consensus 269 ~~~l~~~l~~~ 279 (311)
T 3ork_A 269 AAEMRADLVRV 279 (311)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988864
No 72
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.4e-38 Score=355.11 Aligned_cols=257 Identities=24% Similarity=0.356 Sum_probs=200.8
Q ss_pred CcceeeeecccCceEEEEEEECCcc--EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFGSAD--AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~~~~--vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|++.+.||+|+||.||+|.+.... +|+|+. ..........+.+ .+|+.++++++||||+++++++.....
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~--~~~~~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~~- 99 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCEL--QDRKLTKSERQRF----KEEAEMLKGLQHPNIVRFYDSWESTVK- 99 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEE--EGGGSCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEEEEESS-
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEe--cchhhCHHHHHHH----HHHHHHHHhCCCCCeeeeeeeeccccC-
Confidence 4799999999999999999986544 555554 3333333444444 799999999999999999999875321
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCeeec
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENILID 963 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g--IvHrDLKp~NILld 963 (1142)
.....++||||+++++|.+++... ..+++..+..|+.||+.||.|||++| |+||||||+|||++
T Consensus 100 ---------~~~~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~ 165 (290)
T 1t4h_A 100 ---------GKKCIVLVTELMTSGTLKTYLKRF-----KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT 165 (290)
T ss_dssp ---------SCEEEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES
T ss_pred ---------CCceEEEEEEecCCCCHHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE
Confidence 123569999999999999999762 46899999999999999999999999 99999999999997
Q ss_pred -cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 964 -LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 964 -~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
.+ +.+||+|||++....... .....||+.|+|||++.+ .++.++||||||+++|+
T Consensus 166 ~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~~l~~ 221 (290)
T 1t4h_A 166 GPT-------GSVKIGDLGLATLKRASF------------AKAVIGTPEFMAPEMYEE-----KYDESVDVYAFGMCMLE 221 (290)
T ss_dssp STT-------SCEEECCTTGGGGCCTTS------------BEESCSSCCCCCGGGGGT-----CCCTHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeeCCCcccccccc------------cccccCCcCcCCHHHHhc-----cCCCcchHHHHHHHHHH
Confidence 44 789999999986433211 123468999999998864 47899999999999999
Q ss_pred HHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++|+.||..... ......+..+..+.. .....++.+.+++.+||+.||.+||
T Consensus 222 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rp 275 (290)
T 1t4h_A 222 MATSEYPYSECQNAAQIYRRVTSGVKPAS--------------------------FDKVAIPEVKEIIEGCIRQNKDERY 275 (290)
T ss_dssp HHHSSCTTTTCSSHHHHHHHHTTTCCCGG--------------------------GGGCCCHHHHHHHHHHSCSSGGGSC
T ss_pred HHhCCCCCCCcCcHHHHHHHHhccCCccc--------------------------cCCCCCHHHHHHHHHHccCChhhCC
Confidence 9999999987443 334444433322111 1113345799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++|+|++..
T Consensus 276 s~~ell~h~~f~~~ 289 (290)
T 1t4h_A 276 SIKDLLNHAFFQEE 289 (290)
T ss_dssp CHHHHHTSGGGC--
T ss_pred CHHHHhhCcccccC
Confidence 99999999999753
No 73
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.6e-39 Score=373.29 Aligned_cols=260 Identities=23% Similarity=0.283 Sum_probs=204.1
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHH-HhhCCCCCccceeeeE
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM-LGALRHSCIVEMYGHK 879 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~i-L~~L~HpNIVkl~g~~ 879 (1142)
.....+|++.+.||+|+||.||+|++. +..+|+|+........ ...... +.+|..+ ++.++|||||++++++
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~-~~~~~~----~~~e~~~ll~~~~hp~Iv~l~~~~ 108 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILK-KKEEKH----IMSERNVLLKNVKHPFLVGLHFSF 108 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC------------------CCBCCCCCTTBCCEEEEE
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhh-hHHHHH----HHHHHHHHHHhCCCCCCCCEEEEE
Confidence 345678999999999999999999984 5567888865432211 112222 2567776 4678999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.+ ..|+||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 109 ~~~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N 169 (373)
T 2r5t_A 109 QTAD--------------KLYFVLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPEN 169 (373)
T ss_dssp ECSS--------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred EeCC--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHH
Confidence 8755 45999999999999999976 2468999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 170 Ill~~~-------g~ikL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 228 (373)
T 2r5t_A 170 ILLDSQ-------GHIVLTDFGLCKENIEHN----------STTSTFCGTPEYLAPEVLHK----QPYDRTVDWWCLGAV 228 (373)
T ss_dssp EEECTT-------SCEEECCCCBCGGGBCCC----------CCCCSBSCCCCCCCHHHHTT----CCCCTHHHHHHHHHH
T ss_pred EEECCC-------CCEEEeeCccccccccCC----------CccccccCCccccCHHHhCC----CCCCchhhhHHHHHH
Confidence 999887 789999999997532211 12235579999999999876 568999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|||++|..||.+.+..++...+...... ++ ...+..+.+||.+||+.||.+
T Consensus 229 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~~---------------------------~~~~~~~~~li~~lL~~dp~~ 280 (373)
T 2r5t_A 229 LYEMLYGLPPFYSRNTAEMYDNILNKPLQ-LK---------------------------PNITNSARHLLEGLLQKDRTK 280 (373)
T ss_dssp HHHHHHSSCTTCCSBHHHHHHHHHHSCCC-CC---------------------------SSSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHhcccC-CC---------------------------CCCCHHHHHHHHHHcccCHHh
Confidence 99999999999988887777776543211 00 034567899999999999999
Q ss_pred CCCH----HHHHHHHHhhcC
Q 001142 1120 RPTA----GDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa----~EVL~~L~~~~s 1135 (1142)
||++ .++++|+|++.-
T Consensus 281 R~~~~~~~~~i~~h~~f~~~ 300 (373)
T 2r5t_A 281 RLGAKDDFMEIKSHVFFSLI 300 (373)
T ss_dssp STTTTTTHHHHHTSGGGTTC
T ss_pred CCCCCCCHHHHhCCccccCC
Confidence 9986 699999999753
No 74
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=3.4e-39 Score=383.80 Aligned_cols=259 Identities=24% Similarity=0.322 Sum_probs=204.5
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
...++|++.++||+|+||.||+|++ .+..||+|+....... ....... +.+|+.++++++||||+++++++.+
T Consensus 145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~----~~~e~~~l~~l~h~~iv~l~~~~~~ 219 (446)
T 4ejn_A 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVAH----TLTENRVLQNSRHPFLTALKYSFQT 219 (446)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC------------------CCCCCSCTTSCCEEEEEEE
T ss_pred CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHHH----HHHHHHHHHhCCCCeEeeEEEEEee
Confidence 3467899999999999999999998 4667888886533211 1112222 3689999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCe
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENI 960 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NI 960 (1142)
.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ +||+||||||+||
T Consensus 220 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NI 280 (446)
T 4ejn_A 220 HD--------------RLCFVMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL 280 (446)
T ss_dssp TT--------------EEEEEECCCSSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGE
T ss_pred CC--------------EEEEEEeeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHE
Confidence 55 35999999999999999976 2468999999999999999999998 9999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||+|+...... .......||+.|+|||++.+ ..|+.++|||||||++
T Consensus 281 ll~~~-------~~~kl~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 339 (446)
T 4ejn_A 281 MLDKD-------GHIKITDFGLCKEGIKDG----------ATMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVM 339 (446)
T ss_dssp EECSS-------SCEEECCCCCCCTTCC---------------CCSSSCGGGCCHHHHHT----SCCCTHHHHHHHHHHH
T ss_pred EECCC-------CCEEEccCCCceeccCCC----------cccccccCCccccCHhhcCC----CCCCCccchhhhHHHH
Confidence 99887 789999999997532211 11224579999999999876 5789999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|||++|+.||.+.+..+....+...... ++ ...++.+.+||.+||+.||.+|
T Consensus 340 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~L~~dP~~R 391 (446)
T 4ejn_A 340 YEMMCGRLPFYNQDHEKLFELILMEEIR-FP---------------------------RTLGPEAKSLLSGLLKKDPKQR 391 (446)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHTCSSTTTS
T ss_pred HHHhhCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------ccCCHHHHHHHHHHcccCHHHh
Confidence 9999999999988877777666543321 11 0345679999999999999999
Q ss_pred C-----CHHHHHHHHHhhcC
Q 001142 1121 P-----TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 P-----Sa~EVL~~L~~~~s 1135 (1142)
| +++|+++|+|+..-
T Consensus 392 ~~~~~~t~~ell~hp~f~~~ 411 (446)
T 4ejn_A 392 LGGGSEDAKEIMQHRFFAGI 411 (446)
T ss_dssp TTCSTTTHHHHHTSGGGTTC
T ss_pred CCCCCCCHHHHHhCccccCC
Confidence 9 99999999999753
No 75
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=5.9e-39 Score=366.05 Aligned_cols=261 Identities=25% Similarity=0.283 Sum_probs=187.9
Q ss_pred Cccee---eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEec
Q 001142 808 SLSSC---DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKIS 881 (1142)
Q Consensus 808 ~y~l~---~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~ 881 (1142)
+|++. ++||+|+||+||+|.+. +..+|+|+.... .... +.+|+.+++++. ||||+++++++.+
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~~----~~~e~~~l~~l~~h~niv~~~~~~~~ 77 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEAN----TQKEITALKLCEGHPNIVKLHEVFHD 77 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHHH----HHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhhh----HHHHHHHHHHhcCCCCeeEEEEEEEc
Confidence 35553 78999999999999984 667888875321 1122 368999999997 9999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. ..++||||+++++|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 78 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl 138 (325)
T 3kn6_A 78 QL--------------HTFLVMELLNGGELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLL 138 (325)
T ss_dssp SS--------------EEEEEECCCCSCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred CC--------------EEEEEEEccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEE
Confidence 54 35999999999999999986 357999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.++ ....+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 139 l~~~~----~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwslG~il~ 200 (325)
T 3kn6_A 139 FTDEN----DNLEIKIIDFGFARLKPPDNQ----------PLKTPCFTLHYAAPELLNQ----NGYDESCDLWSLGVILY 200 (325)
T ss_dssp EEC--------CEEEECCCTTCEECCC------------------------------------CCCCHHHHHHHHHHHHH
T ss_pred EecCC----CcccEEEeccccceecCCCCC----------cccccCCCcCccCHHHhcC----CCCCCccchHHHHHHHH
Confidence 97652 114799999999975433211 1123468999999999875 56899999999999999
Q ss_pred HHHhCCCCCCCCCH-------HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001142 1042 ELLTLQVPYMGLSE-------LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1114 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~-------~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~ 1114 (1142)
+|++|+.||.+... .+....+..+....... .....++.+.+||.+||+
T Consensus 201 ~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~ 256 (325)
T 3kn6_A 201 TMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGE------------------------AWKNVSQEAKDLIQGLLT 256 (325)
T ss_dssp HHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSH------------------------HHHTSCHHHHHHHHHHHC
T ss_pred HHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcc------------------------cccCCCHHHHHHHHHHCC
Confidence 99999999976332 33444444333221111 112456789999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcCCCCCC
Q 001142 1115 ENPTERPTAGDLYEMFVARTSSSISS 1140 (1142)
Q Consensus 1115 ~DP~~RPSa~EVL~~L~~~~ss~~s~ 1140 (1142)
.||.+|||+.|+++|+|++.....++
T Consensus 257 ~dP~~Rpt~~ell~h~w~~~~~~~~~ 282 (325)
T 3kn6_A 257 VDPNKRLKMSGLRYNEWLQDGSQLSS 282 (325)
T ss_dssp CCTTTCCCTTTSTTCGGGCTTCCCCC
T ss_pred CChhHCCCHHHHhcChhhccCccCCC
Confidence 99999999999999999987655443
No 76
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=371.32 Aligned_cols=255 Identities=20% Similarity=0.309 Sum_probs=200.5
Q ss_pred ceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~ 887 (1142)
...+.||+|+||.||+|.+ .+..+|+|+.... .....+.+ .+|+.++++++||||+++++++.+.+
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~----~~~~~~~~----~~E~~~l~~l~hpnIv~~~~~~~~~~---- 159 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR----GMKDKEEV----KNEISVMNQLDHANLIQLYDAFESKN---- 159 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECC----SHHHHHHH----HHHHHHHTTCCCTTBCCEEEEEECSS----
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc----ccccHHHH----HHHHHHHHhCCCCCCCeEEEEEEECC----
Confidence 4477899999999999997 4667888886532 22333344 79999999999999999999998654
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccc
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 967 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~ 967 (1142)
..++||||+++++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||+..+.
T Consensus 160 ----------~~~lv~E~~~~~~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~- 224 (373)
T 2x4f_A 160 ----------DIVLVMEYVDGGELFDRIID----ESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRD- 224 (373)
T ss_dssp ----------EEEEEEECCTTCEEHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETT-
T ss_pred ----------EEEEEEeCCCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCC-
Confidence 35999999999999998875 124689999999999999999999999999999999999995331
Q ss_pred cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001142 968 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1047 (1142)
Q Consensus 968 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~ 1047 (1142)
.+.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 225 ----~~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~elltg~ 285 (373)
T 2x4f_A 225 ----AKQIKIIDFGLARRYKPREK-----------LKVNFGTPEFLAPEVVNY----DFVSFPTDMWSVGVIAYMLLSGL 285 (373)
T ss_dssp ----TTEEEECCCSSCEECCTTCB-----------CCCCCSSCTTCCHHHHTT----CBCCHHHHHHHHHHHHHHHHHSS
T ss_pred ----CCcEEEEeCCCceecCCccc-----------cccccCCCcEeChhhccC----CCCCcHHhHHHHHHHHHHHHhCC
Confidence 17899999999976543211 123469999999999875 56889999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 001142 1048 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY 1127 (1142)
Q Consensus 1048 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL 1127 (1142)
.||.+....+....+........... ....++.+.+||.+||+.||.+|||+.|++
T Consensus 286 ~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~~~li~~~L~~dp~~Rps~~e~l 341 (373)
T 2x4f_A 286 SPFLGDNDAETLNNILACRWDLEDEE------------------------FQDISEEAKEFISKLLIKEKSWRISASEAL 341 (373)
T ss_dssp CTTCCSSHHHHHHHHHHTCCCSCSGG------------------------GTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CCCCCCCHHHHHHHHHhccCCCChhh------------------------hccCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 99998887777666654432111100 014566799999999999999999999999
Q ss_pred HHHHhhc
Q 001142 1128 EMFVART 1134 (1142)
Q Consensus 1128 ~~L~~~~ 1134 (1142)
+|+|+..
T Consensus 342 ~hp~~~~ 348 (373)
T 2x4f_A 342 KHPWLSD 348 (373)
T ss_dssp HSHHHHC
T ss_pred cCcCcCC
Confidence 9999874
No 77
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=9.8e-39 Score=362.48 Aligned_cols=264 Identities=22% Similarity=0.268 Sum_probs=210.9
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCCh--HHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSA--DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~--~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
+.|++.+.||+|+||.||+|++. +..+|+|+.......... ...+. +.+|+.++++++||||+++++++.+.
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~ 87 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREE----IEREVSILRQVLHHNVITLHDVYENR 87 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHH----HHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHH----HHHHHHHHHhCCCCCcceEEEEEecC
Confidence 35899999999999999999984 667899886544322111 11233 37999999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 88 ~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~ 148 (321)
T 2a2a_A 88 T--------------DVVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148 (321)
T ss_dssp S--------------EEEEEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred C--------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEE
Confidence 4 35999999999999999975 3568999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.++. ....+||+|||++....... ......||+.|+|||++.+ ..++.++||||||+++|+
T Consensus 149 ~~~~~---~~~~~kl~Dfg~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 210 (321)
T 2a2a_A 149 LDKNI---PIPHIKLIDFGLAHEIEDGV-----------EFKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYI 210 (321)
T ss_dssp SCTTS---SSCCEEECCCTTCEECCTTC-----------CCCCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHH
T ss_pred ecCCC---CcCCEEEccCccceecCccc-----------cccccCCCCCccCcccccC----CCCCCccccHHHHHHHHH
Confidence 87621 11279999999997654321 1123468999999999875 568899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|..||.+....+....+........... ....++.+.+++.+||+.||.+|||
T Consensus 211 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps 266 (321)
T 2a2a_A 211 LLSGASPFLGDTKQETLANITSVSYDFDEEF------------------------FSHTSELAKDFIRKLLVKETRKRLT 266 (321)
T ss_dssp HHHSCCSSCCSSHHHHHHHHHTTCCCCCHHH------------------------HTTCCHHHHHHHHTTSCSSTTTSCC
T ss_pred HHHCCCCCCCCCHHHHHHHHHhcccccChhh------------------------hcccCHHHHHHHHHHcCCChhhCcC
Confidence 9999999998877777666654432211110 1144567999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001142 1123 AGDLYEMFVARTS 1135 (1142)
Q Consensus 1123 a~EVL~~L~~~~s 1135 (1142)
+.|+++|+|+...
T Consensus 267 ~~e~l~hp~~~~~ 279 (321)
T 2a2a_A 267 IQEALRHPWITPV 279 (321)
T ss_dssp HHHHHHSTTTSCS
T ss_pred HHHHhcCccccCC
Confidence 9999999999753
No 78
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1e-38 Score=373.03 Aligned_cols=262 Identities=23% Similarity=0.300 Sum_probs=207.6
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
...+++|++.+.||+|+||.||+|++. +..+|+|+...... ........+.+|+.++++++|||||++++++.
T Consensus 11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 85 (384)
T 4fr4_A 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-----VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ 85 (384)
T ss_dssp CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-----ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 455788999999999999999999984 55688887643211 11111233478999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.. ..++||||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI 146 (384)
T 4fr4_A 86 DEE--------------DMFMVVDLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNI 146 (384)
T ss_dssp CSS--------------EEEEEECCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred eCC--------------EEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHe
Confidence 755 35999999999999999975 35699999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||+++...... ......||+.|+|||++... .+..|+.++|||||||++
T Consensus 147 ll~~~-------g~vkL~DFG~a~~~~~~~-----------~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~il 207 (384)
T 4fr4_A 147 LLDEH-------GHVHITDFNIAAMLPRET-----------QITTMAGTKPYMAPEMFSSR-KGAGYSFAVDWWSLGVTA 207 (384)
T ss_dssp EECTT-------SCEEECCCTTCEECCTTC-----------CBCCCCSCGGGCCGGGTCCC-SSCCBCTTHHHHHHHHHH
T ss_pred EECCC-------CCEEEeccceeeeccCCC-----------ceeccCCCccccCCeeeccC-CCCCCCccceeechHHHH
Confidence 99887 789999999997654321 12245799999999998642 124588999999999999
Q ss_pred HHHHhCCCCCCCCC---HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1041 LELLTLQVPYMGLS---ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~---~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
|+|++|+.||.... ..+....+...... .+ ...++.+.+||.+||+.||
T Consensus 208 ~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~dP 259 (384)
T 4fr4_A 208 YELLRGRRPYHIRSSTSSKEIVHTFETTVVT-YP---------------------------SAWSQEMVSLLKKLLEPNP 259 (384)
T ss_dssp HHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHSCSSG
T ss_pred HHHHhCCCCCCCCCCccHHHHHHHHhhcccC-CC---------------------------CcCCHHHHHHHHHHhcCCH
Confidence 99999999997432 33333333322211 00 1445679999999999999
Q ss_pred CCCCC-HHHHHHHHHhhcC
Q 001142 1118 TERPT-AGDLYEMFVARTS 1135 (1142)
Q Consensus 1118 ~~RPS-a~EVL~~L~~~~s 1135 (1142)
.+||+ ++++++|+|+..-
T Consensus 260 ~~R~s~~~~l~~hp~f~~~ 278 (384)
T 4fr4_A 260 DQRFSQLSDVQNFPYMNDI 278 (384)
T ss_dssp GGSCCSHHHHHTSGGGTTC
T ss_pred hHhcccHHHHHcChhhhcC
Confidence 99998 9999999999753
No 79
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.2e-39 Score=368.41 Aligned_cols=289 Identities=22% Similarity=0.236 Sum_probs=205.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||.||+|++. +..+|+|+....... .........+.+|+.++++++||||+++++++.+..
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS---EAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcc---hhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 567999999999999999999984 667888875432211 111122233479999999999999999999997655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. ++||||++ ++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 86 ~~--------------~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 146 (346)
T 1ua2_A 86 NI--------------SLVFDFME-TDLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD 146 (346)
T ss_dssp CC--------------EEEEECCS-EEHHHHHTT----CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred ce--------------EEEEEcCC-CCHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc
Confidence 33 99999998 588888764 234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+++....... ......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 147 ~~-------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el 206 (346)
T 1ua2_A 147 EN-------GVLKLADFGLAKSFGSPNR----------AYTHQVVTRWYRAPELLFG---ARMYGVGVDMWAVGCILAEL 206 (346)
T ss_dssp TT-------CCEEECCCGGGSTTTSCCC----------CCCCSCCCCTTCCHHHHTT---CSCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEecccceeccCCcc----------cCCcccccccccCchHhhC---CCCCCchhhhHhHHHHHHHH
Confidence 87 7899999999976543211 1224468999999999865 24578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|.+||.+....+....+...........+...........................++.+.+||.+||+.||.+|||+
T Consensus 207 l~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 286 (346)
T 1ua2_A 207 LLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITA 286 (346)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCH
T ss_pred HHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCH
Confidence 99999999887776665553321111111110000000000000000000001112456789999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 001142 1124 GDLYEMFVARTSS 1136 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss 1136 (1142)
.|+++|+|+....
T Consensus 287 ~ell~h~~f~~~~ 299 (346)
T 1ua2_A 287 TQALKMKYFSNRP 299 (346)
T ss_dssp HHHHTSGGGTSSS
T ss_pred HHHhcChhhhcCC
Confidence 9999999998653
No 80
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6e-39 Score=363.23 Aligned_cols=279 Identities=24% Similarity=0.279 Sum_probs=200.5
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|++. +..+|+|+..... .....+. +.+|+.++++++|||||++++++.+...
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~~ 78 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREK----VMREVKALAKLEHPGIVRYFNAWLETPP 78 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHH----HHHHHHHHTSCCCTTBCCEEEEEEECCS
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHH----HHHHHHHHHhCCCCCEeeEEEEEEEecc
Confidence 46899999999999999999984 6778998865432 1222233 3799999999999999999999865431
Q ss_pred CC-----------C--------------------------------CCCCCccccceEEEEEeccCCCCHHHHHHHHhcc
Q 001142 885 LP-----------S--------------------------------ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET 921 (1142)
Q Consensus 885 ~~-----------~--------------------------------~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~ 921 (1142)
.. . ............++||||+++++|.+++... .
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~ 156 (332)
T 3qd2_B 79 EKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRR--C 156 (332)
T ss_dssp CHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTC--C
T ss_pred chhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcc--c
Confidence 00 0 0000011223479999999999999999762 2
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccc--cCC
Q 001142 922 GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA--HRG 999 (1142)
Q Consensus 922 ~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~--~~~ 999 (1142)
.....++..++.++.||+.||+|||++||+||||||+|||++.+ +.+||+|||+++............ ...
T Consensus 157 ~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-------~~~kL~DfG~a~~~~~~~~~~~~~~~~~~ 229 (332)
T 3qd2_B 157 SLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD-------DVVKVGDFGLVTAMDQDEEEQTVLTPMPA 229 (332)
T ss_dssp SGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT-------CCEEECCCTTCEECSCC------------
T ss_pred CccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCC-------CCEEEeecCcccccccchhhccccccccc
Confidence 22345777899999999999999999999999999999999877 789999999998765432110000 000
Q ss_pred CCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcc
Q 001142 1000 IPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGS 1079 (1142)
Q Consensus 1000 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~ 1079 (1142)
........||+.|+|||++.+ ..++.++|||||||++|+|++|..|+.. .......+.....+.
T Consensus 230 ~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~---------- 293 (332)
T 3qd2_B 230 YATHTGQVGTKLYMSPEQIHG----NNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPL---------- 293 (332)
T ss_dssp --CCCSCC-CGGGSCHHHHHC----CCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCH----------
T ss_pred cccccccCCCcCccChHHhcC----CCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCc----------
Confidence 112234569999999999876 5689999999999999999998766531 122223333222211
Q ss_pred cccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1080 CHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1080 ~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
.....++.+.+++.+||+.||.+|||+.|+++|+|++.
T Consensus 294 -----------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 294 -----------------LFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp -----------------HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred -----------------ccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 11144566899999999999999999999999999864
No 81
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=362.50 Aligned_cols=265 Identities=23% Similarity=0.372 Sum_probs=211.1
Q ss_pred CCCCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
..++|++.+.||+|+||.||+|++.+ ..+|+|+.... ......+. +.+|+.++++++||||+++++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~hp~iv~~~~ 117 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE---ASADMQAD----FQREAALMAEFDNPNIVKLLG 117 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT---CCHHHHHH----HHHHHHHHHTCCCTTBCCEEE
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc---cCHHHHHH----HHHHHHHHHhCCCCCEEEEEE
Confidence 34679999999999999999999853 56788774321 12233333 489999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-------------------CCCCCCHHHHHHHHHHH
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-------------------GEKHVSVKLALFIAQDV 938 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-------------------~~~~ls~~~i~~Ia~qI 938 (1142)
++.+.+.. ++||||+++++|.+++...... ....+++..++.|+.||
T Consensus 118 ~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 183 (343)
T 1luf_A 118 VCAVGKPM--------------CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQV 183 (343)
T ss_dssp EECSSSSC--------------EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHH
T ss_pred EEccCCce--------------EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence 99865543 9999999999999999863211 12568999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhh
Q 001142 939 AAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVL 1018 (1142)
Q Consensus 939 a~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 1018 (1142)
+.||.|||++||+||||||+|||++.+ +.+||+|||++......... .......+|+.|+|||++
T Consensus 184 ~~~l~~LH~~~ivH~Dlkp~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~t~~y~aPE~~ 248 (343)
T 1luf_A 184 AAGMAYLSERKFVHRDLATRNCLVGEN-------MVVKIADFGLSRNIYSADYY--------KADGNDAIPIRWMPPESI 248 (343)
T ss_dssp HHHHHHHHHTTCCCSCCSGGGEEECGG-------GCEEECCCSCHHHHTGGGCB--------C----CCBCGGGCCHHHH
T ss_pred HHHHHHHHhCCeecCCCCcceEEECCC-------CeEEEeecCCCcccccCccc--------cccCCCcccceecChhhh
Confidence 999999999999999999999999887 78999999999765432111 111234578999999998
Q ss_pred ccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchh
Q 001142 1019 RAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA 1097 (1142)
Q Consensus 1019 ~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1142)
.+ ..++.++||||||+++|+|++ |..||.+....+....+..+..+..+.
T Consensus 249 ~~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------- 299 (343)
T 1luf_A 249 FY----NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE------------------------- 299 (343)
T ss_dssp HH----CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCT-------------------------
T ss_pred cc----CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCC-------------------------
Confidence 76 568899999999999999999 999999888777777766554332221
Q ss_pred hhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 001142 1098 ELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1098 ~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ss 1136 (1142)
.+++.+.+++.+||+.||.+|||+.++++++......
T Consensus 300 --~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~ 336 (343)
T 1luf_A 300 --NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCER 336 (343)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC-
T ss_pred --CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhh
Confidence 4456799999999999999999999999998876543
No 82
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=8.7e-39 Score=370.91 Aligned_cols=269 Identities=21% Similarity=0.341 Sum_probs=213.0
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccce
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 875 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl 875 (1142)
.....+|++.++||+|+||+||+|++. +..||+|+.. .. ........+ .+|+.++++++|||||++
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~~----~~E~~~l~~l~hpnIv~~ 139 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP--EV-CSEQDELDF----LMEALIISKFNHQNIVRC 139 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECC--SS-CCHHHHHHH----HHHHHHHHHCCCTTBCCE
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecc--cc-cChhhHHHH----HHHHHHHHhCCCCCCCeE
Confidence 344567999999999999999999963 3357777643 21 223333334 789999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIMHR 953 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~--~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHr 953 (1142)
++++.+.... ++||||+++|+|.+++...... ....+++..++.|+.||+.||+|||++||+||
T Consensus 140 ~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr 205 (367)
T 3l9p_A 140 IGVSLQSLPR--------------FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR 205 (367)
T ss_dssp EEEECSSSSC--------------EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred EEEEecCCCC--------------EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 9999865543 9999999999999999874321 12458999999999999999999999999999
Q ss_pred CCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001142 954 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1033 (1142)
Q Consensus 954 DLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1033 (1142)
||||+|||++.++ ....+||+|||+++....... ........||+.|+|||++.+ ..++.++||
T Consensus 206 Dlkp~NIll~~~~----~~~~~kL~DFG~a~~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~----~~~~~~~Dv 269 (367)
T 3l9p_A 206 DIAARNCLLTCPG----PGRVAKIGDFGMARDIYRAGY--------YRKGGCAMLPVKWMPPEAFME----GIFTSKTDT 269 (367)
T ss_dssp CCCGGGEEESCSS----TTCCEEECCCHHHHHHHHHSS--------CTTCCGGGSCGGGCCHHHHHH----CCCCHHHHH
T ss_pred CCChhhEEEecCC----CCceEEECCCccccccccccc--------cccCCCcCCcccEECHHHhcC----CCCCcHHHH
Confidence 9999999998542 115699999999975432211 111224468999999999876 568999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1034 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1034 wSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
|||||++|||++ |..||.+....++...+..+..+..+. ..++.+.+|+.+|
T Consensus 270 wslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~ 322 (367)
T 3l9p_A 270 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK---------------------------NCPGPVYRIMTQC 322 (367)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHH
Confidence 999999999998 999999888888777776654432221 3456699999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhcC
Q 001142 1113 TEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1113 L~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
|+.||.+|||+.+|+++++....
T Consensus 323 l~~dP~~Rps~~eil~~l~~~~~ 345 (367)
T 3l9p_A 323 WQHQPEDRPNFAIILERIEYCTQ 345 (367)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCCHhHCcCHHHHHHHHHHHhh
Confidence 99999999999999999988643
No 83
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.7e-38 Score=349.03 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=209.1
Q ss_pred CCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
...+++|++.+.||+|+||.||+|++.+..+|+|++... .......+.+ .+|+.++++++||||+++++++.+.
T Consensus 6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~ 79 (271)
T 3kmu_A 6 GIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVR--DWSTRKSRDF----NEECPRLRIFSHPNVLPVLGACQSP 79 (271)
T ss_dssp CCCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCT--TCCHHHHHHH----HHHGGGGCCCSCTTEECEEEEECTT
T ss_pred CCCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEeccc--ccCHHHHHHH----HHHHHHHHhcCCCchhheEEEEccC
Confidence 345678999999999999999999999999999987543 2233434444 8999999999999999999998764
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCe
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENI 960 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g--IvHrDLKp~NI 960 (1142)
.. .+.++||||+++++|.+++.. .....+++..+..|+.||+.||.|||++| |+||||||+||
T Consensus 80 ~~------------~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Ni 144 (271)
T 3kmu_A 80 PA------------PHPTLITHWMPYGSLYNVLHE---GTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSV 144 (271)
T ss_dssp TS------------SSCEEEEECCTTCBHHHHHHS---CSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGE
T ss_pred CC------------CCeEeeecccCCCcHHHHHhh---cccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceE
Confidence 21 134999999999999999975 23336899999999999999999999999 99999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.++|+|||++..... ....||+.|+|||++.+.. ...++.++||||||+++
T Consensus 145 l~~~~-------~~~~l~~~~~~~~~~~---------------~~~~~t~~y~aPE~~~~~~-~~~~~~~~Di~slG~il 201 (271)
T 3kmu_A 145 MIDED-------MTARISMADVKFSFQS---------------PGRMYAPAWVAPEALQKKP-EDTNRRSADMWSFAVLL 201 (271)
T ss_dssp EECTT-------SCEEEEGGGSCCTTSC---------------TTCBSCGGGSCHHHHHSCG-GGSCHHHHHHHHHHHHH
T ss_pred EEcCC-------cceeEEeccceeeecc---------------cCccCCccccChhhhccCC-CCCCCchhhHHHHHHHH
Confidence 99877 7899999888753221 1335899999999987521 12344589999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+|++|+.||.+....+....+.. ...+..+ ...++.+.+++.+||+.||.+
T Consensus 202 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~ 254 (271)
T 3kmu_A 202 WELVTREVPFADLSNMEIGMKVALEGLRPTIP---------------------------PGISPHVSKLMKICMNEDPAK 254 (271)
T ss_dssp HHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhCCCCccccChHHHHHHHHhcCCCCCCC---------------------------CCCCHHHHHHHHHHcCCChhh
Confidence 999999999998777666554432 2222211 145567999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001142 1120 RPTAGDLYEMFVART 1134 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ 1134 (1142)
|||+.++++.+....
T Consensus 255 Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 255 RPKFDMIVPILEKMQ 269 (271)
T ss_dssp SCCHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHhh
Confidence 999999999887653
No 84
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.9e-38 Score=383.36 Aligned_cols=268 Identities=22% Similarity=0.287 Sum_probs=211.3
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCC-----hHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSS-----ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~-----~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
..+|++.++||+|+||+||+|++. +..+|+|+......... ....+.....+.+|+.++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 357999999999999999999984 56788888653321110 01112233455899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
+.+.. ..++||||+++|+|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+
T Consensus 115 ~~~~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~ 175 (504)
T 3q5i_A 115 FEDKK--------------YFYLVTEFYEGGELFEQIIN-----RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPE 175 (504)
T ss_dssp EECSS--------------EEEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred EEcCC--------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHH
Confidence 98655 45999999999999999876 246999999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||++.++ ....+||+|||++....... ......||+.|+|||++.+ .++.++|||||||
T Consensus 176 Nil~~~~~----~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~ 235 (504)
T 3q5i_A 176 NILLENKN----SLLNIKIVDFGLSSFFSKDY-----------KLRDRLGTAYYIAPEVLKK-----KYNEKCDVWSCGV 235 (504)
T ss_dssp GEEESSTT----CCSSEEECCCTTCEECCTTS-----------CBCCCCSCTTTCCHHHHTT-----CBCTHHHHHHHHH
T ss_pred HEEEecCC----CCccEEEEECCCCEEcCCCC-----------ccccccCCcCCCCHHHhcc-----CCCchHHHHHHHH
Confidence 99998652 12469999999997654321 1123469999999999864 5789999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1039 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
++|+|++|..||.+.+..++...+..+........+ ...++.+.+||.+||+.||.
T Consensus 236 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~ 291 (504)
T 3q5i_A 236 IMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW------------------------KNISDEAKELIKLMLTYDYN 291 (504)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH------------------------TTSCHHHHHHHHHHTCSSTT
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccc------------------------CCCCHHHHHHHHHHcCCChh
Confidence 999999999999998888888887666543221111 14566799999999999999
Q ss_pred CCCCHHHHHHHHHhhcCC
Q 001142 1119 ERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ss 1136 (1142)
+|||+.|+++|+|++...
T Consensus 292 ~R~t~~e~l~h~~~~~~~ 309 (504)
T 3q5i_A 292 KRCTAEEALNSRWIKKYA 309 (504)
T ss_dssp TSCCHHHHHTSHHHHHTC
T ss_pred HCCCHHHHhcCHhhhhch
Confidence 999999999999998654
No 85
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=5e-39 Score=366.48 Aligned_cols=291 Identities=22% Similarity=0.266 Sum_probs=211.2
Q ss_pred CCCCCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 800 GLDPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 800 ~~~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
.+....+++|++.+.||+|+||.||+|++. +..+|+|+.... .......+. +.+|+.++++++||||+++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~ 91 (331)
T 4aaa_A 18 NLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLES--DDDKMVKKI----AMREIKLLKQLRHENLVNLLE 91 (331)
T ss_dssp -CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESC--SSCHHHHHH----HHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecC--CCchHHHHH----HHHHHHHHhhCCCCCEeeEEE
Confidence 455667889999999999999999999985 667888875422 223232333 378999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
++.+.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||
T Consensus 92 ~~~~~~--------------~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp 152 (331)
T 4aaa_A 92 VCKKKK--------------RWYLVFEFVDHTILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKP 152 (331)
T ss_dssp EEEETT--------------EEEEEEECCSEEHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred EeecCC--------------EEEEEEecCCcchHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcCh
Confidence 998655 34999999998888887653 34699999999999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
+|||++.+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++||||||
T Consensus 153 ~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~Di~slG 212 (331)
T 4aaa_A 153 ENILVSQS-------GVVKLCDFGFARTLAAPGE----------VYDDEVATRWYRAPELLVG---DVKYGKAVDVWAIG 212 (331)
T ss_dssp GGEEECTT-------SCEEECCCTTC----------------------CCCCCTTCCHHHHTT---CTTCCTHHHHHHHH
T ss_pred heEEEcCC-------CcEEEEeCCCceeecCCcc----------ccCCCcCCccccCcccccC---CCCcchHHHHHHHH
Confidence 99999887 7899999999976543211 1123468999999999875 23678999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHh---hhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001142 1038 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELE---ALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1114 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~ 1114 (1142)
|++|+|++|+.||.+....+....+........+.... ..........................++.+.+|+.+||+
T Consensus 213 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 292 (331)
T 4aaa_A 213 CLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLH 292 (331)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhc
Confidence 99999999999999877766554443221111111111 000000000000000000111112457789999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001142 1115 ENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1115 ~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
.||++|||+.|+++|+|++..
T Consensus 293 ~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 293 IDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp SSGGGSCCGGGGGGSHHHHGG
T ss_pred cCcccCCCHHHHhcCchhccC
Confidence 999999999999999999754
No 86
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-38 Score=368.79 Aligned_cols=286 Identities=19% Similarity=0.219 Sum_probs=205.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||.||+|.+. +..||+|+. ..........+ ++.+|+.++++++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~--~~~~~~~~~~~----~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 97 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKL--YRPFQSELFAK----RAYRELRLLKHMRHENVIGLLDVFTPDE 97 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEEC--SSTTSSHHHHH----HHHHHHHHHHHCCBTTBCCCSEEECSCS
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEe--CccccCHHHHH----HHHHHHHHHHhCCCcCCCCceeeEecCC
Confidence 357999999999999999999984 566777763 33222333233 3489999999999999999999987653
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. ......|+||||+ +++|.++++. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 98 ~~--------~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~ 162 (367)
T 1cm8_A 98 TL--------DDFTDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN 162 (367)
T ss_dssp ST--------TTCCCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred cc--------ccCceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc
Confidence 22 1123459999999 7999999875 3589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+++..... .....||+.|+|||++.+ ...++.++|||||||++|||
T Consensus 163 ~~-------~~~kl~Dfg~a~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el 219 (367)
T 1cm8_A 163 ED-------CELKILDFGLARQADSE-------------MTGYVVTRWYRAPEVILN---WMRYTQTVDIWSVGCIMAEM 219 (367)
T ss_dssp TT-------CCEEECCCTTCEECCSS-------------CCSSCSCGGGCCTHHHHT---TTCCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEeeecccccccc-------------cCcCcCCCCcCCHHHHhC---CCCCChhhhHHHHHHHHHHH
Confidence 87 78999999999764321 123468999999999875 24688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccccccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
++|+.||.+.+..+....+......................+... .............++.+.+|+.+||+.||.+|
T Consensus 220 l~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R 299 (367)
T 1cm8_A 220 ITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQR 299 (367)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTS
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHC
Confidence 999999998877766665533221111111111100000000000 00000011112456789999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||+.|+++|+|+..-
T Consensus 300 ~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 300 VTAGEALAHPYFESL 314 (367)
T ss_dssp CCHHHHHHSGGGTTT
T ss_pred CCHHHHhcChHHHhh
Confidence 999999999999754
No 87
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=5.1e-39 Score=365.79 Aligned_cols=285 Identities=19% Similarity=0.212 Sum_probs=204.7
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+++|++.++||+|+||+||+|++. +..+|+|+...... ......+ .+|+.++++++||||+++++++.+.+
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 73 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---EGAPCTA----IREVSLLKDLKHANIVTLHDIIHTEK 73 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCCC----CCCHHHHSCCCCTTBCCEEEEEECSS
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc---cccchhH----HHHHHHHHhcCCCCCCeeeeEEeeCC
Confidence 468999999999999999999984 66788887643321 1111122 57999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++||||++ ++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 74 ~--------------~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~ 134 (324)
T 3mtl_A 74 S--------------LTLVFEYLD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN 134 (324)
T ss_dssp C--------------EEEEEECCS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC
T ss_pred E--------------EEEEecccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC
Confidence 3 499999997 6999998762 34689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 135 ~~-------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l 194 (324)
T 3mtl_A 135 ER-------GELKLADFGLARAKSIPTK----------TYDNEVVTLWYRPPDILLG---STDYSTQIDMWGVGCIFYEM 194 (324)
T ss_dssp TT-------CCEEECSSSEEECC----------------------CGGGCCHHHHTT---CCCCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccCcccccccCCcc----------ccccccCcccccChhhhcC---CCCCCcHHHHHHHHHHHHHH
Confidence 87 7899999999975432211 1123468999999999875 24678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccccccccc-C-CCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS-G-SGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
++|+.||.+.+..+....+...........+.............. . ............++.+.+|+.+||+.||.+||
T Consensus 195 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 274 (324)
T 3mtl_A 195 ATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI 274 (324)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCC
Confidence 999999998887776655533211111111110000000000000 0 00000111124567799999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001142 1122 TAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ss 1136 (1142)
|++|+++|+|+....
T Consensus 275 t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 275 SAEDAMKHPFFLSLG 289 (324)
T ss_dssp CHHHHTTSGGGGGGC
T ss_pred CHHHHhcChhhhhcc
Confidence 999999999997653
No 88
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.3e-38 Score=383.91 Aligned_cols=258 Identities=24% Similarity=0.341 Sum_probs=205.8
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|++.++||+|+||+||+|++. +..+|+|+...... ....... +.+|+.+++.++|||||++++++.+..
T Consensus 38 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~-- 109 (494)
T 3lij_A 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV--STSSNSK----LLEEVAVLKLLDHPNIMKLYDFFEDKR-- 109 (494)
T ss_dssp HEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTHH----HHHHHHHHTTCCCTTBCCEEEEEECSS--
T ss_pred CeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc--CchHHHH----HHHHHHHHHhCCCCCCCeEEEEEEeCC--
Confidence 5999999999999999999984 56788887653321 1111223 378999999999999999999998654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++|+|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++..
T Consensus 110 ------------~~~lv~e~~~~g~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~ 172 (494)
T 3lij_A 110 ------------NYYLVMECYKGGELFDEIIH-----RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK 172 (494)
T ss_dssp ------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS
T ss_pred ------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCC
Confidence 35999999999999998876 2468999999999999999999999999999999999999764
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
. ..+.+||+|||++....... ......||+.|+|||++.+ .|+.++|||||||++|+|++
T Consensus 173 ~----~~~~~kl~DfG~a~~~~~~~-----------~~~~~~gt~~y~aPE~l~~-----~~~~~~DiwslG~il~~ll~ 232 (494)
T 3lij_A 173 E----KDALIKIVDFGLSAVFENQK-----------KMKERLGTAYYIAPEVLRK-----KYDEKCDVWSIGVILFILLA 232 (494)
T ss_dssp S----TTCCEEECCCTTCEECBTTB-----------CBCCCCSCTTTCCHHHHTT-----CBCTHHHHHHHHHHHHHHHH
T ss_pred C----CCCcEEEEECCCCeECCCCc-----------cccccCCCcCeeCHHHHcc-----cCCCchhHHHHHHHHHHHHh
Confidence 2 12679999999997654321 1123469999999999863 58899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|..||.+....++...+..+........+ ...++.+.+||.+||+.||.+|||+.|
T Consensus 233 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~R~s~~e 288 (494)
T 3lij_A 233 GYPPFGGQTDQEILRKVEKGKYTFDSPEW------------------------KNVSEGAKDLIKQMLQFDSQRRISAQQ 288 (494)
T ss_dssp SSCSSCCSSHHHHHHHHHHTCCCCCSGGG------------------------TTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred CCCCCCCCCHHHHHHHHHhCCCCCCchhc------------------------ccCCHHHHHHHHHHCCCChhhCccHHH
Confidence 99999998888888777665433211111 145567999999999999999999999
Q ss_pred HHHHHHhhc
Q 001142 1126 LYEMFVART 1134 (1142)
Q Consensus 1126 VL~~L~~~~ 1134 (1142)
+++|+|++.
T Consensus 289 ~l~hp~~~~ 297 (494)
T 3lij_A 289 ALEHPWIKE 297 (494)
T ss_dssp HHTCHHHHH
T ss_pred HhcCccccc
Confidence 999999974
No 89
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=7.5e-39 Score=354.57 Aligned_cols=265 Identities=26% Similarity=0.360 Sum_probs=211.6
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
...++|++.+.||+|+||.||+|++. +..+|+|+.... .......+.+ .+|+.++++++||||+++++++.+
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~ 76 (279)
T 2w5a_A 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYG--SMTEAEKQML----VSEVNLLRELKHPNIVRYYDRIID 76 (279)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECT--TCCHHHHHHH----HHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred CchhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcc--cCCHHHHHHH----HHHHHHHHhcCCCCCCeEEEEEec
Confidence 34678999999999999999999984 566788875433 2233333344 899999999999999999998764
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-----ccccCCC
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH-----IMHRDIK 956 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g-----IvHrDLK 956 (1142)
.. ....++||||+++++|.+++..... ....+++..+..++.||+.||+|||++| |+|||||
T Consensus 77 ~~------------~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~ 143 (279)
T 2w5a_A 77 RT------------NTTLYIVMEYCEGGDLASVITKGTK-ERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143 (279)
T ss_dssp GG------------GTEEEEEEECCTTEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCS
T ss_pred CC------------CceEEEEEeCCCCCCHHHHHHhhcc-cCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccc
Confidence 32 1246999999999999999986432 2346999999999999999999999999 9999999
Q ss_pred CCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001142 957 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1036 (1142)
Q Consensus 957 p~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSL 1036 (1142)
|+|||++.+ +.+||+|||.+......... .....||+.|+|||++.+ ..++.++|||||
T Consensus 144 p~NIl~~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~sl 202 (279)
T 2w5a_A 144 PANVFLDGK-------QNVKLGDFGLARILNHDTSF----------AKTFVGTPYYMSPEQMNR----MSYNEKSDIWSL 202 (279)
T ss_dssp GGGEEECSS-------SCEEECCCCHHHHC---CHH----------HHHHHSCCTTCCHHHHHC----C-CCHHHHHHHH
T ss_pred hhhEEEcCC-------CCEEEecCchheeecccccc----------ccccCCCccccChHHhcc----CCCCchhhHHHH
Confidence 999999877 78999999999765432110 012358999999999876 468899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1037 GCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1037 GviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
|+++|+|++|+.||......++...+..+..+.++. ..++.+.+++.+||+.|
T Consensus 203 G~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~ 255 (279)
T 2w5a_A 203 GCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY---------------------------RYSDELNEIITRMLNLK 255 (279)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCc---------------------------ccCHHHHHHHHHHcCCC
Confidence 999999999999999887777777766655433221 34567999999999999
Q ss_pred CCCCCCHHHHHHHHHhhcC
Q 001142 1117 PTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~~s 1135 (1142)
|.+|||+.|+++++|+...
T Consensus 256 p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 256 DYHRPSVEEILENPLILEH 274 (279)
T ss_dssp GGGSCCHHHHHTSTTCCGG
T ss_pred cccCCCHHHHHhChhhhhh
Confidence 9999999999999998754
No 90
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2.1e-38 Score=367.08 Aligned_cols=258 Identities=24% Similarity=0.273 Sum_probs=193.2
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
...++|++.+.||+|+||+||+|++ .+..+|+|+..... .. .+. +.+|+.++++++||||+++++++.+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~---~~~----~~~E~~~l~~l~hpniv~~~~~~~~ 87 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA--AI---DEN----VQREIINHRSLRHPNIVRFKEVILT 87 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST--TS---CHH----HHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc--cc---cHH----HHHHHHHHHhCCCCCCCcEEEEEee
Confidence 3457899999999999999999998 46678888764221 11 122 3689999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 88 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nil 148 (361)
T 3uc3_A 88 PT--------------HLAIIMEYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTL 148 (361)
T ss_dssp SS--------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEE
T ss_pred CC--------------EEEEEEEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 55 35999999999999999976 246999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCC-chhhHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYG-LEVDIWSYGCLL 1040 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s-~ksDVwSLGviL 1040 (1142)
++.+.. +.+||+|||+++...... ......||+.|+|||++.+ ..++ .++|||||||++
T Consensus 149 l~~~~~-----~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~~DiwslG~il 208 (361)
T 3uc3_A 149 LDGSPA-----PRLKICDFGYSKSSVLHS-----------QPKSTVGTPAYIAPEVLLR----QEYDGKIADVWSCGVTL 208 (361)
T ss_dssp ECSSSS-----CCEEECCCCCC--------------------------CTTSCHHHHHC----SSCCHHHHHHHHHHHHH
T ss_pred EcCCCC-----ceEEEeecCccccccccC-----------CCCCCcCCCCcCChhhhcC----CCCCCCeeeeehhHHHH
Confidence 986521 459999999986432211 1123469999999999876 3444 459999999999
Q ss_pred HHHHhCCCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1041 LELLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
|+|++|+.||.+... ......+...... .+ .....++.+.+||.+||+.|
T Consensus 209 ~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~-------------------------~~~~~s~~~~~li~~~L~~d 262 (361)
T 3uc3_A 209 YVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS-IP-------------------------DDIRISPECCHLISRIFVAD 262 (361)
T ss_dssp HHHHHSSCSCC----CCCHHHHHHHHHTTCCC-CC-------------------------TTSCCCHHHHHHHHHHSCSC
T ss_pred HHHHhCCCCCCCCccHHHHHHHHHHHhcCCCC-CC-------------------------CcCCCCHHHHHHHHHHccCC
Confidence 999999999976432 2222222221110 00 00134567999999999999
Q ss_pred CCCCCCHHHHHHHHHhhcC
Q 001142 1117 PTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~~s 1135 (1142)
|.+|||+.|+++|+|+...
T Consensus 263 P~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 263 PATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp TTTSCCHHHHHTSHHHHTT
T ss_pred hhHCcCHHHHHhCcchhcC
Confidence 9999999999999999654
No 91
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.2e-38 Score=383.14 Aligned_cols=263 Identities=27% Similarity=0.326 Sum_probs=212.2
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||+||+|++. +..+|+|+........ .... .+.+|+.++++++|||||++++++.+..
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~- 94 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTS----TILREVELLKKLDHPNIMKLFEILEDSS- 94 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC--SCHH----HHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc--hHHH----HHHHHHHHHHhCCCCCcCeEEEEEEcCC-
Confidence 45999999999999999999984 6778999864322111 1122 3379999999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++.
T Consensus 95 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~ 156 (486)
T 3mwu_A 95 -------------SFYIVGELYTGGELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156 (486)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESS
T ss_pred -------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEec
Confidence 35999999999999999876 246999999999999999999999999999999999999965
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
.. ..+.+||+|||+++...... ......||+.|+|||++.+ .|+.++|||||||++|+|+
T Consensus 157 ~~----~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~ll 216 (486)
T 3mwu_A 157 KE----KDCDIKIIDFGLSTCFQQNT-----------KMKDRIGTAYYIAPEVLRG-----TYDEKCDVWSAGVILYILL 216 (486)
T ss_dssp SS----TTCCEEECSCSCTTTBCCC---------------CCTTGGGGCCGGGGGS-----CCCHHHHHHHHHHHHHHHH
T ss_pred CC----CCCCEEEEECCcCeECCCCC-----------ccCCCcCCCCCCCHHHhCC-----CCCchhhHHHHHHHHHHHH
Confidence 31 12679999999997554321 1123469999999999874 4889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|..||.+....++...+..+........+ ...++.+.+||.+||+.||.+|||+.
T Consensus 217 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~R~t~~ 272 (486)
T 3mwu_A 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQW------------------------RTISDDAKDLIRKMLTFHPSLRITAT 272 (486)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCSCSGGG------------------------GGSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCCCccc------------------------CCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 999999998888887777655432211110 14567799999999999999999999
Q ss_pred HHHHHHHhhcCCCC
Q 001142 1125 DLYEMFVARTSSSI 1138 (1142)
Q Consensus 1125 EVL~~L~~~~ss~~ 1138 (1142)
|+++|+|++.....
T Consensus 273 ~~l~hp~~~~~~~~ 286 (486)
T 3mwu_A 273 QCLEHPWIQKYSSE 286 (486)
T ss_dssp HHHHCHHHHHTCCC
T ss_pred HHhcCHhhccCccc
Confidence 99999999876543
No 92
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2e-38 Score=364.22 Aligned_cols=299 Identities=17% Similarity=0.203 Sum_probs=210.8
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.+.+|++.++||+|+||.||+|++ .+..+|+|+..... ........ +.+|+.++++++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~ 88 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPIT----ALREIKILQLLKHENVVNLIEICRTK 88 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSS--CSSSSCHH----HHHHHHHHHHCCCTTBCCEEEEEEEC
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccc--ccccchHH----HHHHHHHHHhccCCCcccHhheeecc
Confidence 467899999999999999999998 45678888754332 12111222 36899999999999999999998864
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
... ........++||||++ ++|.+.+.. ....+++..+..|+.||+.||.|||++||+||||||+|||+
T Consensus 89 ~~~------~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~ 157 (351)
T 3mi9_A 89 ASP------YNRCKGSIYLVFDFCE-HDLAGLLSN----VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI 157 (351)
T ss_dssp --------------CEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred ccc------cccCCceEEEEEeccC-CCHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE
Confidence 321 0111235799999997 688887754 23469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+++........ .........||+.|+|||++.+ ...++.++|||||||++|+
T Consensus 158 ~~~-------~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~e 221 (351)
T 3mi9_A 158 TRD-------GVLKLADFGLARAFSLAKNS------QPNRYTNRVVTLWYRPPELLLG---ERDYGPPIDLWGAGCIMAE 221 (351)
T ss_dssp CTT-------SCEEECCCTTCEECCCCSSS------SCCCCCSSCSCGGGCCHHHHTT---CCSCCTHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEccchhcccccccccc------cccccCCcccccCccCchhhcC---CCCCCcHhHHHHHHHHHHH
Confidence 887 78999999999765432211 1112234568999999999875 2457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCC-CCCchh---hhhhHHHHHHHHHHhcccCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSG-FEKPEA---ELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
|++|+.||.+.........+........+..+................. ...... ....++.+.+||.+||+.||+
T Consensus 222 ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 301 (351)
T 3mi9_A 222 MWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA 301 (351)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGG
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChh
Confidence 9999999998877766655533211111111111100000000000000 000000 011256689999999999999
Q ss_pred CCCCHHHHHHHHHhhcCC
Q 001142 1119 ERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ss 1136 (1142)
+|||++|+++|+|+....
T Consensus 302 ~R~t~~e~l~hp~f~~~~ 319 (351)
T 3mi9_A 302 QRIDSDDALNHDFFWSDP 319 (351)
T ss_dssp GSCCHHHHHTSGGGGSSS
T ss_pred hCCCHHHHhCCCCcCCCC
Confidence 999999999999998653
No 93
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.7e-38 Score=350.01 Aligned_cols=256 Identities=23% Similarity=0.312 Sum_probs=207.6
Q ss_pred CCCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.++|++.+.||+|+||.||+|++.+ ..+|+|+.... ... .+.+ .+|+.++++++||||+++++++.+...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~---~~~~----~~E~~~l~~l~h~~i~~~~~~~~~~~~ 77 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG--SMS---EDEF----FQEAQTMMKLSHPKLVKFYGVCSKEYP 77 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT--TBC---HHHH----HHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccC--CCc---HHHH----HHHHHHHHhCCCCCEeeEEEEEccCCc
Confidence 4579999999999999999999854 46888876432 111 2233 789999999999999999999876543
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 78 --------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~ 139 (268)
T 3sxs_A 78 --------------IYIVTEYISNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDR 139 (268)
T ss_dssp --------------EEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECT
T ss_pred --------------eEEEEEccCCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECC
Confidence 49999999999999999763 235899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||.+......... ......+|+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 140 ~-------~~~~l~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 199 (268)
T 3sxs_A 140 D-------LCVKVSDFGMTRYVLDDQYV---------SSVGTKFPVKWSAPEVFHY----FKYSSKSDVWAFGILMWEVF 199 (268)
T ss_dssp T-------CCEEECCTTCEEECCTTCEE---------ECCSCCCCGGGCCHHHHHH----SEEETTHHHHHHHHHHHHHH
T ss_pred C-------CCEEEccCccceecchhhhh---------cccCCCcCcccCCHHHHhc----cCCchhhhhHHHHHHHHHHH
Confidence 7 78999999999765432211 1112346788999999876 45789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |..||......+....+..+.....+. ..++.+.+++.+||+.||.+|||+
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps~ 252 (268)
T 3sxs_A 200 SLGKMPYDLYTNSEVVLKVSQGHRLYRPH---------------------------LASDTIYQIMYSCWHELPEKRPTF 252 (268)
T ss_dssp TTTCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHTTCSSGGGSCCH
T ss_pred cCCCCCccccChHHHHHHHHcCCCCCCCC---------------------------cChHHHHHHHHHHcCCChhhCcCH
Confidence 9 999999887777666665544322211 334569999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.|+++++.....
T Consensus 253 ~~ll~~L~~l~~ 264 (268)
T 3sxs_A 253 QQLLSSIEPLRE 264 (268)
T ss_dssp HHHHHHHGGGCC
T ss_pred HHHHHHHHHhhh
Confidence 999999987543
No 94
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=9.6e-39 Score=368.04 Aligned_cols=259 Identities=24% Similarity=0.274 Sum_probs=193.9
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
+.|++.+.||+|+||.||+|++. +..+|+|+.... ...+.+ .+|+.++++++||||+++++++.+..
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~------~~~~~~----~~E~~~l~~l~h~niv~~~~~~~~~~- 121 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT------VDKKIV----RTEIGVLLRLSHPNIIKLKEIFETPT- 121 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------------CHHHHHCCCTTBCCEEEEEECSS-
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc------hhHHHH----HHHHHHHHhCCCCCCcceeeeEecCC-
Confidence 45999999999999999999985 456888875422 112233 68999999999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 122 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~ 183 (349)
T 2w4o_A 122 -------------EISLVLELVTGGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYAT 183 (349)
T ss_dssp -------------EEEEEECCCCSCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESS
T ss_pred -------------eEEEEEEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEec
Confidence 35999999999999999864 346899999999999999999999999999999999999975
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
. ...+.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 184 ~----~~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ell 244 (349)
T 2w4o_A 184 P----APDAPLKIADFGLSKIVEHQV-----------LMKTVCGTPGYCAPEILRG----CAYGPEVDMWSVGIITYILL 244 (349)
T ss_dssp S----STTCCEEECCCC---------------------------CGGGSCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred C----CCCCCEEEccCccccccCccc-----------ccccccCCCCccCHHHhcC----CCCCcccchHHHHHHHHHHH
Confidence 2 112789999999997543211 1123468999999999876 56889999999999999999
Q ss_pred hCCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 TLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+|..||......+ ....+.......... .....+..+.+||.+||+.||++|||+
T Consensus 245 ~g~~pf~~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~ 300 (349)
T 2w4o_A 245 CGFEPFYDERGDQFMFRRILNCEYYFISP------------------------WWDEVSLNAKDLVRKLIVLDPKKRLTT 300 (349)
T ss_dssp HSSCTTCCTTCHHHHHHHHHTTCCCCCTT------------------------TTTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred hCCCCCCCCcccHHHHHHHHhCCCccCCc------------------------hhhhCCHHHHHHHHHHccCChhhCcCH
Confidence 9999997655443 444444333211110 001456679999999999999999999
Q ss_pred HHHHHHHHhhcCCC
Q 001142 1124 GDLYEMFVARTSSS 1137 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss~ 1137 (1142)
.|+++|+|+.....
T Consensus 301 ~e~l~hp~~~~~~~ 314 (349)
T 2w4o_A 301 FQALQHPWVTGKAA 314 (349)
T ss_dssp HHHHHSTTTTSTTC
T ss_pred HHHhcCcccCCCcc
Confidence 99999999986543
No 95
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-38 Score=382.16 Aligned_cols=259 Identities=23% Similarity=0.276 Sum_probs=211.5
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
..+.+|.+.+.||+|+||.||+|++. +..||+|+..... ....+....+.+|+.+++.++||||+++++++.+
T Consensus 13 ~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~-----~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~ 87 (476)
T 2y94_A 13 VKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK-----IRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST 87 (476)
T ss_dssp CEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHH-----HHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred ceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhh-----ccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE
Confidence 45678999999999999999999984 7788999864321 1111122345899999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 88 ~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIl 148 (476)
T 2y94_A 88 PS--------------DIFMVMEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVL 148 (476)
T ss_dssp SS--------------EEEEEEECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEE
T ss_pred CC--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEE
Confidence 54 35999999999999999864 356999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||++....... ......||+.|+|||++.+. ..++.++|||||||++|
T Consensus 149 l~~~-------~~vkL~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwSlGvil~ 207 (476)
T 2y94_A 149 LDAH-------MNAKIADFGLSNMMSDGE-----------FLRTSCGSPNYAAPEVISGR---LYAGPEVDIWSSGVILY 207 (476)
T ss_dssp ECTT-------CCEEECCCSSCEECCTTC-----------CBCCCCSCSTTCCHHHHTTC---CBCSHHHHHHHHHHHHH
T ss_pred EecC-------CCeEEEeccchhhccccc-----------cccccCCCcCeEChhhccCC---CCCCCcceehhhHHHHH
Confidence 9887 789999999997654311 11234699999999998762 23478999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|++|+.||.+.........+..+.... + ...++.+.+||.+||+.||.+||
T Consensus 208 elltG~~Pf~~~~~~~~~~~i~~~~~~~-p---------------------------~~~s~~~~~Li~~~L~~dP~~Rp 259 (476)
T 2y94_A 208 ALLCGTLPFDDDHVPTLFKKICDGIFYT-P---------------------------QYLNPSVISLLKHMLQVDPMKRA 259 (476)
T ss_dssp HHHHSSCSSCCSSSHHHHHHHHTTCCCC-C---------------------------TTCCHHHHHHHHHHTCSSTTTSC
T ss_pred HHhhCCCCCCCCCHHHHHHHHhcCCcCC-C---------------------------ccCCHHHHHHHHHHcCCCchhCc
Confidence 9999999999877777776665443211 0 03455689999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++|+|+...
T Consensus 260 t~~eil~hp~~~~~ 273 (476)
T 2y94_A 260 TIKDIREHEWFKQD 273 (476)
T ss_dssp CHHHHHTCHHHHTT
T ss_pred CHHHHHhCHHhhhc
Confidence 99999999999864
No 96
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.5e-38 Score=377.31 Aligned_cols=298 Identities=18% Similarity=0.199 Sum_probs=194.4
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.++||+|+||+||+|++. +..||+|+. ..........+.+ .+|+.+|++++|||||++++++....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i--~~~~~~~~~~~~~----~~E~~~l~~l~h~niv~l~~~~~~~~ 125 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKI--LRVFEDLIDCKRI----LREIAILNRLNHDHVVKVLDIVIPKD 125 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEE--CSTTSSHHHHHHH----HHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEe--chhhcCHHHHHHH----HHHHHHHHhCCCCCCCceEEEEecCC
Confidence 367999999999999999999874 566777764 3323333333444 89999999999999999999986533
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. ......|+||||+. ++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 126 ~---------~~~~~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~ 190 (458)
T 3rp9_A 126 V---------EKFDELYVVLEIAD-SDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN 190 (458)
T ss_dssp T---------TTCCCEEEEECCCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC
T ss_pred c---------ccCceEEEEEeccc-cchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEEC
Confidence 1 12235799999985 899999864 35699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccc-----------------cCCCCCCCCccCCCcccchhhhccccCCCC
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-----------------HRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1026 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-----------------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1026 (1142)
.+ +.+||+|||+|+............ ..........+||+.|+|||++.. ...
T Consensus 191 ~~-------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~ 260 (458)
T 3rp9_A 191 QD-------CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL---QEN 260 (458)
T ss_dssp TT-------CCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTT---CCC
T ss_pred CC-------CCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhC---CCC
Confidence 87 789999999998754321110000 000011234578999999998753 256
Q ss_pred CCchhhHHHHHHHHHHHHh-----------CCCCCCCCCH--------------------HHHHHHHH-hCCCCCchhHH
Q 001142 1027 YGLEVDIWSYGCLLLELLT-----------LQVPYMGLSE--------------------LEIHDLIQ-MGKRPRLTDEL 1074 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLt-----------G~~Pf~~~~~--------------------~el~~~I~-~~~~p~l~~~l 1074 (1142)
|+.++|||||||++|||++ |+++|.+.+. .+....+. ....+. ...+
T Consensus 261 ~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~-~~~~ 339 (458)
T 3rp9_A 261 YTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPS-EEDI 339 (458)
T ss_dssp CCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCC-HHHH
T ss_pred CCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCC-HHHH
Confidence 8999999999999999999 6777765431 11122221 111111 1111
Q ss_pred hhhcccccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1075 EALGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1075 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
............. ..............++.+.+||.+||+.||++|||++|+++|+|++.-
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 340 EALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp HTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 1100000000000 000001111112456789999999999999999999999999999864
No 97
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1e-38 Score=379.15 Aligned_cols=268 Identities=23% Similarity=0.270 Sum_probs=210.5
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.++||+|+||+||+|++. +..+|+|+..... ...+.....+.+|+.++..++||||+++++++.+.+
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-----MLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHH-----hhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 457999999999999999999985 4567888754211 111111122478999999999999999999998755
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..|+||||++||+|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 148 --------------~~~lV~Ey~~gg~L~~~l~~----~~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~ 209 (437)
T 4aw2_A 148 --------------NLYLVMDYYVGGDLLTLLSK----FEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209 (437)
T ss_dssp --------------EEEEEECCCTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEecCCCCcHHHHHHH----ccCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc
Confidence 35999999999999999975 134699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL~E 1042 (1142)
.+ +.+||+|||+|+........ .....+||+.|+|||++.... ....|+.++|||||||++||
T Consensus 210 ~~-------g~vkL~DFGla~~~~~~~~~---------~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~e 273 (437)
T 4aw2_A 210 MN-------GHIRLADFGSCLKLMEDGTV---------QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273 (437)
T ss_dssp TT-------SCEEECCCTTCEECCTTSCE---------ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEcchhhhhhcccCCCc---------ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHH
Confidence 87 78999999999765432111 112357999999999987321 12468899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE-- 1119 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~-- 1119 (1142)
|++|+.||.+.+..+....+.... ...++ ......++.+.+||.+||..+|++
T Consensus 274 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p------------------------~~~~~~s~~~~dLi~~lL~~~~~r~~ 329 (437)
T 4aw2_A 274 MLYGETPFYAESLVETYGKIMNHKERFQFP------------------------TQVTDVSENAKDLIRRLICSREHRLG 329 (437)
T ss_dssp HHHSSCTTCCSSHHHHHHHHHTHHHHCCCC------------------------SSCCCSCHHHHHHHHTTSSCGGGCTT
T ss_pred HHhCCCCCCCCChhHHHHhhhhccccccCC------------------------cccccCCHHHHHHHHHHhcccccccC
Confidence 999999999888877776664311 00000 000135667999999999988888
Q ss_pred CCCHHHHHHHHHhhcCC
Q 001142 1120 RPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ss 1136 (1142)
||+++|+++|+|++.-.
T Consensus 330 r~~~~eil~Hpff~~i~ 346 (437)
T 4aw2_A 330 QNGIEDFKKHPFFSGID 346 (437)
T ss_dssp TTTTHHHHTSGGGTTCC
T ss_pred CCCHHHHhCCCccCCCC
Confidence 99999999999998643
No 98
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.3e-38 Score=366.37 Aligned_cols=256 Identities=24% Similarity=0.264 Sum_probs=203.3
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~ 883 (1142)
++|++.+.||+|+||.||+|.+. +..+|+|+..... . .. .+|++++.++ +||||+++++++.+..
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~------~~----~~E~~~l~~~~~hp~iv~~~~~~~~~~ 89 (342)
T 2qr7_A 22 DGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK--R------DP----TEEIEILLRYGQHPNIITLKDVYDDGK 89 (342)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT--C------CC----HHHHHHHHHHTTSTTBCCEEEEEECSS
T ss_pred ccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc--C------Ch----HHHHHHHHHhcCCCCcCeEEEEEEcCC
Confidence 46999999999999999999984 6678888764221 1 11 4688888888 7999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..|+||||++||+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+.
T Consensus 90 --------------~~~lv~E~~~gg~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~ 150 (342)
T 2qr7_A 90 --------------YVYVVTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150 (342)
T ss_dssp --------------EEEEEECCCCSCBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEES
T ss_pred --------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEe
Confidence 45999999999999999875 34699999999999999999999999999999999999985
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+. ...+.+||+|||+++....... ......||+.|+|||++.+ ..|+.++|||||||++|+|
T Consensus 151 ~~~---~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el 213 (342)
T 2qr7_A 151 DES---GNPESIRICDFGFAKQLRAENG----------LLMTPCYTANFVAPEVLER----QGYDAACDIWSLGVLLYTM 213 (342)
T ss_dssp SSS---CSGGGEEECCCTTCEECBCTTC----------CBCCSSCCSSCCCHHHHHH----HHHHHHHHHHHHHHHHHHH
T ss_pred cCC---CCcCeEEEEECCCcccCcCCCC----------ceeccCCCccccCHHHhcC----CCCCCccCeeeHhHHHHHH
Confidence 431 1124699999999976543211 1123468999999999876 4577899999999999999
Q ss_pred HhCCCCCCC---CCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1044 LTLQVPYMG---LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1044 LtG~~Pf~~---~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
++|..||.+ ....++...+..+........ ....++.+.+||.+||+.||++|
T Consensus 214 l~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dP~~R 269 (342)
T 2qr7_A 214 LTGYTPFANGPDDTPEEILARIGSGKFSLSGGY------------------------WNSVSDTAKDLVSKMLHVDPHQR 269 (342)
T ss_dssp HHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTT------------------------TTTSCHHHHHHHHHHTCSSTTTS
T ss_pred hcCCCCCCCCCcCCHHHHHHHHccCCcccCccc------------------------cccCCHHHHHHHHHHCCCChhHC
Confidence 999999975 345556666655443211100 01456679999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001142 1121 PTAGDLYEMFVART 1134 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ 1134 (1142)
||+.|+++|+|+..
T Consensus 270 ~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 270 LTAALVLRHPWIVH 283 (342)
T ss_dssp CCHHHHTTSHHHHT
T ss_pred cCHHHHhcCCeecC
Confidence 99999999999964
No 99
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.7e-38 Score=350.90 Aligned_cols=263 Identities=24% Similarity=0.310 Sum_probs=208.1
Q ss_pred CcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCCh--HHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSA--DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~--~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+|++.+.||+|+||.||+|++. +..+|+|+.......... ...+. +.+|+.++++++||||+++++++.+..
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T 3bhy_A 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREE----IEREVNILREIRHPNIITLHDIFENKT 81 (283)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHH----HHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHH----HHHHHHHHHhCCCCCeeehhheecCCC
Confidence 5899999999999999999984 678899986544322111 11233 379999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 82 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~ 142 (283)
T 3bhy_A 82 --------------DVVLILELVSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLL 142 (283)
T ss_dssp --------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEES
T ss_pred --------------eEEEEEeecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEe
Confidence 35999999999999999976 24689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.++ .....+||+|||.+........ .....||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 143 ~~~---~~~~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 204 (283)
T 3bhy_A 143 DKN---VPNPRIKLIDFGIAHKIEAGNE-----------FKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYIL 204 (283)
T ss_dssp CSS---SSSCCEEECCCTTCEECC-------------------CCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHH
T ss_pred cCC---CCCCceEEEecccceeccCCCc-----------ccccCCCcCccCcceecC----CCCCcchhhhhHHHHHHHH
Confidence 762 1123799999999976543211 123458999999999875 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..||.+....+....+........... ....++.+.+++.+||+.||.+|||+
T Consensus 205 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps~ 260 (283)
T 3bhy_A 205 LSGASPFLGETKQETLTNISAVNYDFDEEY------------------------FSNTSELAKDFIRRLLVKDPKRRMTI 260 (283)
T ss_dssp HHSSCTTCCSSHHHHHHHHHTTCCCCCHHH------------------------HTTCCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HHCCCCCCCcchHHHHHHhHhcccCCcchh------------------------cccCCHHHHHHHHHHccCCHhHCcCH
Confidence 999999998777766666554432211110 11445679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.|+++|+|++..
T Consensus 261 ~~~l~h~~~~~~ 272 (283)
T 3bhy_A 261 AQSLEHSWIKAI 272 (283)
T ss_dssp HHHHHCHHHHHH
T ss_pred HHHHhCHHHHHH
Confidence 999999998753
No 100
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.4e-38 Score=351.55 Aligned_cols=255 Identities=25% Similarity=0.353 Sum_probs=204.8
Q ss_pred CCCCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
...+|++.+.||+|+||+||+|.+.+ ..+|+|+.... ... .+++ .+|+.++++++||||+++++++.+..
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~---~~~~----~~E~~~l~~l~h~~i~~~~~~~~~~~ 92 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMS---EDEF----IEEAKVMMNLSHEKLVQLYGVCTKQR 92 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT--SBC---HHHH----HHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC--CCC---HHHH----HHHHHHHhcCCCCCEeeEEEEEecCC
Confidence 45579999999999999999999854 46888876422 111 1233 78999999999999999999997654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 93 ~--------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~ 154 (283)
T 3gen_A 93 P--------------IFIITEYMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN 154 (283)
T ss_dssp S--------------EEEEECCCTTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC
T ss_pred C--------------eEEEEeccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc
Confidence 3 49999999999999999752 24589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++......... ......+|+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 155 ~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~~l~~l 214 (283)
T 3gen_A 155 DQ-------GVVKVSDFGLSRYVLDDEYT---------SSVGSKFPVRWSPPEVLMY----SKFSSKSDIWAFGVLMWEI 214 (283)
T ss_dssp TT-------SCEEECSTTGGGGBCCHHHH---------STTSTTSCGGGCCHHHHHH----CCCSHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccccccccccccccc---------cccCCccCcccCCHHHhcc----CCCCchhhHHHHHHHHHHH
Confidence 77 78999999999765432211 1123347888999999986 4688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |+.||......+....+..+.....+. ..++.+.+++.+||+.||.+|||
T Consensus 215 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps 267 (283)
T 3gen_A 215 YSLGKMPYERFTNSETAEHIAQGLRLYRPH---------------------------LASEKVYTIMYSCWHEKADERPT 267 (283)
T ss_dssp HTTTCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSGGGSCC
T ss_pred HhCCCCCccccChhHHHHHHhcccCCCCCC---------------------------cCCHHHHHHHHHHccCChhHCcC
Confidence 98 999999888777777666554322211 33456899999999999999999
Q ss_pred HHHHHHHHHhh
Q 001142 1123 AGDLYEMFVAR 1133 (1142)
Q Consensus 1123 a~EVL~~L~~~ 1133 (1142)
+.++++++...
T Consensus 268 ~~~ll~~L~~~ 278 (283)
T 3gen_A 268 FKILLSNILDV 278 (283)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999998764
No 101
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=3.6e-38 Score=352.44 Aligned_cols=260 Identities=21% Similarity=0.280 Sum_probs=210.7
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+....+|++.+.||+|+||.||+|.+. +..+|+|+...... ......+. +.+|+.++++++||||+++++++.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~ 85 (294)
T 2rku_A 11 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREK----MSMEISIHRSLAHQHVVGFHGFFE 85 (294)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHHH----HHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred CCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhc-cCHHHHHH----HHHHHHHHHhCCCCCEeeeeeeec
Confidence 455678999999999999999999985 56788887653321 12233333 378999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~--------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Ni 146 (294)
T 2rku_A 86 DND--------------FVFVVLELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 146 (294)
T ss_dssp CSS--------------EEEEEEECCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred cCC--------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhE
Confidence 654 35999999999999999876 24689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||.+........ ......||+.|+|||++.+ ..++.++||||||+++
T Consensus 147 l~~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l 205 (294)
T 2rku_A 147 FLNED-------LEVKIGDFGLATKVEYDGE----------RKKVLCGTPNYIAPEVLSK----KGHSFEVDVWSIGCIM 205 (294)
T ss_dssp EECTT-------CCEEECCCTTCEECCSTTC----------CBCCCCSCCSSCCHHHHTT----SCBCTHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEEeccCceecccCcc----------ccccccCCCCcCCcchhcc----CCCCchhhHHHHHHHH
Confidence 99877 7899999999976542111 1123468999999999875 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|+.||......+....+...... .+ ...++.+.+++.+||+.||++|
T Consensus 206 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~~p~~R 257 (294)
T 2rku_A 206 YTLLVGKPPFETSCLKETYLRIKKNEYS-IP---------------------------KHINPVAASLIQKMLQTDPTAR 257 (294)
T ss_dssp HHHHHSSCTTCCSSHHHHHHHHHTTCCC-CC---------------------------TTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHhCCCCCCCCCHHHHHHHHhhccCC-Cc---------------------------cccCHHHHHHHHHHcccChhhC
Confidence 9999999999987766655555433211 00 0344568999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||++|+++|+|+...
T Consensus 258 ps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 258 PTINELLNDEFFTSG 272 (294)
T ss_dssp CCGGGGGGSHHHHTS
T ss_pred cCHHHHhhChheecC
Confidence 999999999999754
No 102
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.3e-38 Score=382.48 Aligned_cols=261 Identities=24% Similarity=0.324 Sum_probs=211.7
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||.||+|++ .+..+|+|+........ ....+.+ .+|+.++++++|||||++++++.+..
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~----~~E~~~l~~l~hpniv~~~~~~~~~~- 99 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKESL----LREVQLLKQLDHPNIMKLYEFFEDKG- 99 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB-SSCHHHH----HHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc-chHHHHH----HHHHHHHHhCCCCCCCcEEEEEEeCC-
Confidence 4699999999999999999998 46778998865332211 1222333 79999999999999999999998755
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++.
T Consensus 100 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 161 (484)
T 3nyv_A 100 -------------YFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLES 161 (484)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS
T ss_pred -------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEec
Confidence 35999999999999999865 356999999999999999999999999999999999999954
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
.. ..+.+||+|||++........ .....||+.|+|||++.+ .|+.++|||||||++|+|+
T Consensus 162 ~~----~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~ll 221 (484)
T 3nyv_A 162 KS----KDANIRIIDFGLSTHFEASKK-----------MKDKIGTAYYIAPEVLHG-----TYDEKCDVWSTGVILYILL 221 (484)
T ss_dssp SS----TTCCEEECCTTHHHHBCCCCS-----------HHHHTTGGGTCCHHHHHT-----CCCTHHHHHHHHHHHHHHH
T ss_pred CC----CCCcEEEEeeeeeEEcccccc-----------cccCCCCccccCceeecC-----CCCCcceeHHHHHHHHHHH
Confidence 21 127899999999976543211 123469999999999864 5889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|..||.+.+..+....+..+........+ ...++.+.+||.+||+.||.+|||+.
T Consensus 222 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~R~s~~ 277 (484)
T 3nyv_A 222 SGCPPFNGANEYDILKKVEKGKYTFELPQW------------------------KKVSESAKDLIRKMLTYVPSMRISAR 277 (484)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCSGGG------------------------GGSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHcCCCCCCCccc------------------------ccCCHHHHHHHHHHCCCChhHCcCHH
Confidence 999999998888888777665432211100 14567799999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001142 1125 DLYEMFVARTS 1135 (1142)
Q Consensus 1125 EVL~~L~~~~s 1135 (1142)
|+++|+|++..
T Consensus 278 e~l~h~~~~~~ 288 (484)
T 3nyv_A 278 DALDHEWIQTY 288 (484)
T ss_dssp HHHTSHHHHHH
T ss_pred HHhhChhhccc
Confidence 99999999754
No 103
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.6e-38 Score=351.84 Aligned_cols=264 Identities=24% Similarity=0.331 Sum_probs=193.5
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||+||+|++ .+..+|+|+.... .......+. +..+...++.++||||+++++++.+.+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~~~~~~~~~~h~~iv~~~~~~~~~~ 79 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT--VNSQEQKRL----LMDLDISMRTVDCPFTVTFYGALFREG 79 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC-----CHHHHHHH----HHHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecc--cCcHHHHHH----HHHHHHHHHhCCCCeEEEEeeeeeccC
Confidence 46799999999999999999998 5677888875422 111222222 244555578889999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCeee
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENILI 962 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDLKp~NILl 962 (1142)
. .++||||++ ++|.+++...... ...+++..+..|+.||+.||.|||++ ||+||||||+|||+
T Consensus 80 ~--------------~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~ 143 (290)
T 3fme_A 80 D--------------VWICMELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI 143 (290)
T ss_dssp S--------------EEEEEECCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE
T ss_pred C--------------EEEEEehhc-cchHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE
Confidence 3 499999997 6998888764333 35799999999999999999999998 99999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||++....... ......||+.|+|||++........++.++||||||+++|+
T Consensus 144 ~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~ 205 (290)
T 3fme_A 144 NAL-------GQVKMCDFGISGYLVDDV-----------AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIE 205 (290)
T ss_dssp CTT-------CCEEBCCC--------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeecCCcccccccc-----------cccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHH
Confidence 887 789999999997654321 11233689999999997533234578899999999999999
Q ss_pred HHhCCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLtG~~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++|+.||... ..............+.... ...++.+.+++.+||+.||.+||
T Consensus 206 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~~p~~Rp 259 (290)
T 3fme_A 206 LAILRFPYDSWGTPFQQLKQVVEEPSPQLPA--------------------------DKFSAEFVDFTSQCLKKNSKERP 259 (290)
T ss_dssp HHHTSCSSCCCSCHHHHHHHHHHSCCCCCCT--------------------------TTSCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHCCCCccccCchHHHHHHHhccCCCCccc--------------------------ccCCHHHHHHHHHHhhcChhhCc
Confidence 99999999753 3333333332222221110 14456799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++|+|+...
T Consensus 260 t~~e~l~hp~f~~~ 273 (290)
T 3fme_A 260 TYPELMQHPFFTLH 273 (290)
T ss_dssp CHHHHTTSHHHHHH
T ss_pred CHHHHHhCcccccC
Confidence 99999999999754
No 104
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=373.78 Aligned_cols=269 Identities=24% Similarity=0.259 Sum_probs=211.2
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
..++|++.++||+|+||.||+|++. +..+|+|+..... .........+.+|..++.+++||||+++++++.+.
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~-----~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD-----MLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 3568999999999999999999984 6778888864211 11111123347899999999999999999999875
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+ +.|+||||++||+|.+++.+. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 134 ~--------------~~~lVmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl 195 (412)
T 2vd5_A 134 N--------------YLYLVMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195 (412)
T ss_dssp S--------------EEEEEECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred C--------------EEEEEEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee
Confidence 5 359999999999999999762 2369999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc---CCCCCCchhhHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~~s~ksDVwSLGvi 1039 (1142)
+.+ +.+||+|||+++........ .....+||+.|+|||++.... ....|+.++|||||||+
T Consensus 196 d~~-------g~vkL~DFGla~~~~~~~~~---------~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvi 259 (412)
T 2vd5_A 196 DRC-------GHIRLADFGSCLKLRADGTV---------RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVF 259 (412)
T ss_dssp CTT-------SCEEECCCTTCEECCTTSCE---------ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHH
T ss_pred cCC-------CCEEEeechhheeccCCCcc---------ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHH
Confidence 987 88999999999765432111 112457999999999987321 12467899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|||++|+.||.+.+..+....+.... .... +......++.+.+||.+||. +|.
T Consensus 260 lyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~------------------------p~~~~~~s~~~~dli~~lL~-~p~ 314 (412)
T 2vd5_A 260 AYEMFYGQTPFYADSTAETYGKIVHYKEHLSL------------------------PLVDEGVPEEARDFIQRLLC-PPE 314 (412)
T ss_dssp HHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC------------------------C----CCCHHHHHHHHTTSS-CGG
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhcccCcCC------------------------CccccCCCHHHHHHHHHHcC-Chh
Confidence 999999999999888877776664311 0000 00011456679999999999 999
Q ss_pred CC---CCHHHHHHHHHhhcCCC
Q 001142 1119 ER---PTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1119 ~R---PSa~EVL~~L~~~~ss~ 1137 (1142)
+| |+++|+++|+|++.-.+
T Consensus 315 ~Rlgr~~~~ei~~Hpff~~i~w 336 (412)
T 2vd5_A 315 TRLGRGGAGDFRTHPFFFGLDW 336 (412)
T ss_dssp GCTTTTTHHHHHTSGGGTTCCS
T ss_pred hcCCCCCHHHHhcCCCcCCCCH
Confidence 98 69999999999986544
No 105
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.5e-38 Score=356.45 Aligned_cols=286 Identities=20% Similarity=0.231 Sum_probs=206.7
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.++||+|+||+||+|++. +..+|+|+...... ....+. +.+|++++++++||||+++++++.....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 81 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDV----QMREFEVLKKLNHKNIVKLFAIEEETTT 81 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHH----HHHHHHHHHHCCCTTBCCEEEEEECTTT
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHH----HHHHHHHHHhcCCCCcceEEEEeecCCC
Confidence 46999999999999999999985 67788888643221 111222 3689999999999999999999876431
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee--
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI-- 962 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl-- 962 (1142)
...++||||+++++|.+++.... ....+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 82 ------------~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~ 147 (319)
T 4euu_A 82 ------------RHKVLIMEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147 (319)
T ss_dssp ------------CCEEEEEECCTTCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred ------------ceEEEEEeCCCCCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEec
Confidence 24599999999999999997632 22348999999999999999999999999999999999998
Q ss_pred --ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc----CCCCCCchhhHHHH
Q 001142 963 --DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH----KPNLYGLEVDIWSY 1036 (1142)
Q Consensus 963 --d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~~~~~s~ksDVwSL 1036 (1142)
+.+ +.+||+|||+++....... .....||+.|+|||++.... ....++.++|||||
T Consensus 148 ~~~~~-------~~~kL~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~Diwsl 209 (319)
T 4euu_A 148 GEDGQ-------SVYKLTDFGAARELEDDEQ-----------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209 (319)
T ss_dssp CTTSC-------EEEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHH
T ss_pred cCCCC-------ceEEEccCCCceecCCCCc-----------eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHH
Confidence 443 7899999999976543211 12346899999999986311 12567899999999
Q ss_pred HHHHHHHHhCCCCCCCCC----HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1037 GCLLLELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1037 GviL~ELLtG~~Pf~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
||++|||++|+.||.... ..+....+..+..+............ ...+.. ... .........++.+.+++.+|
T Consensus 210 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~-~~~-~~~~~~~~~~~~l~~ll~~~ 286 (319)
T 4euu_A 210 GVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENG-PIDWSG-DMP-VSCSLSRGLQVLLTPVLANI 286 (319)
T ss_dssp HHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTC-CEEEES-SCC-TTCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCC-ccccCc-cCC-cccccchhHHHHhHHHHHHh
Confidence 999999999999996422 23344444333332211111000000 000000 000 01112236778899999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhc
Q 001142 1113 TEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1113 L~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
|+.||++|||++|+++|+.-..
T Consensus 287 L~~dP~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 287 LEADQEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp SCCCTTTSCCHHHHHHHHHHHT
T ss_pred ccCChhhhccHHHhhhccHHHh
Confidence 9999999999999999987543
No 106
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.2e-38 Score=347.98 Aligned_cols=259 Identities=23% Similarity=0.263 Sum_probs=202.6
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
...+|++.+.||+|+||.||+|.+. +..+|+|+..... .........+.+|+.++++++||||+++++++...
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 83 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK-----IRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTP 83 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECS
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc-----ccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecC
Confidence 4578999999999999999999984 6788888864321 11112223457999999999999999999998865
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+ ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 84 ~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~ 144 (276)
T 2h6d_A 84 T--------------DFFMVMEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144 (276)
T ss_dssp S--------------EEEEEEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE
T ss_pred C--------------eEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE
Confidence 4 459999999999999999762 368999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||.+....... ......||+.|+|||++.+. ...+.++||||||+++|+
T Consensus 145 ~~~-------~~~~l~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG~~l~~ 203 (276)
T 2h6d_A 145 DAH-------MNAKIADFGLSNMMSDGE-----------FLRTSCGSPNYAAPEVISGR---LYAGPEVDIWSCGVILYA 203 (276)
T ss_dssp CTT-------SCEEECCCCGGGCCCC------------------------CCTGGGTTS---CCCHHHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeecccccccCCCc-----------ceecccCCccccCHHHHcCC---CCCCccchHHHHHHHHHH
Confidence 877 789999999987654321 11234689999999998751 233689999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|+.||......+....+..+.... + ...+..+.+++.+||+.||.+|||
T Consensus 204 l~~g~~p~~~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~l~~li~~~l~~~p~~Rps 255 (276)
T 2h6d_A 204 LLCGTLPFDDEHVPTLFKKIRGGVFYI-P---------------------------EYLNRSVATLLMHMLQVDPLKRAT 255 (276)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHCCCCC-C---------------------------TTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhCCCCCCCCcHHHHHHHhhcCcccC-c---------------------------hhcCHHHHHHHHHHccCChhhCCC
Confidence 999999998877766666655433211 0 033456899999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001142 1123 AGDLYEMFVARTSS 1136 (1142)
Q Consensus 1123 a~EVL~~L~~~~ss 1136 (1142)
+.|+++|+|++...
T Consensus 256 ~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 256 IKDIREHEWFKQDL 269 (276)
T ss_dssp HHHHHHSHHHHTTC
T ss_pred HHHHHhChhhccCc
Confidence 99999999998654
No 107
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=2.8e-38 Score=349.79 Aligned_cols=262 Identities=22% Similarity=0.235 Sum_probs=200.3
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~ 883 (1142)
.+|++.+.||+|+||+||+|.+. +..+|+|+.... .........+ .+|+.++.++ +||||+++++++.+.+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~e~~~~~~l~~h~~iv~~~~~~~~~~ 84 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP--LAGSVDEQNA----LREVYAHAVLGQHSHVVRYFSAWAEDD 84 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--CTTSHHHHHH----HHHHHHHHHSCSCTTBCCEEEEEEETT
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccc--ccccHHHHHH----HHHHHHHHHhCCCCCeeeeeeeeecCC
Confidence 46899999999999999999984 777888876533 2222333333 7899999999 8999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++...... ...+++..+..|+.||+.||.|||++||+||||||+|||++
T Consensus 85 --------------~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~ 149 (289)
T 1x8b_A 85 --------------HMLIQNEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 149 (289)
T ss_dssp --------------EEEEEEECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------eEEEEEEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEc
Confidence 459999999999999999864332 24689999999999999999999999999999999999998
Q ss_pred ccccc------------CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchh
Q 001142 964 LERKK------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1031 (1142)
Q Consensus 964 ~~~~~------------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1031 (1142)
.++.. ......+||+|||.+...... ....||+.|+|||++.+ ...++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------------~~~~gt~~y~aPE~~~~---~~~~~~~~ 212 (289)
T 1x8b_A 150 RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP--------------QVEEGDSRFLANEVLQE---NYTHLPKA 212 (289)
T ss_dssp --------------------CCCEEECCCTTCEETTCS--------------CCCCCCGGGCCHHHHTT---CCTTHHHH
T ss_pred CCCCCcccccccccccccCCceEEEEcccccccccCCc--------------cccCCCccccChhHhcC---CCCCCchh
Confidence 54200 012357999999998764321 12358999999999875 23566899
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001142 1032 DIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1111 (1142)
Q Consensus 1032 DVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~ 1111 (1142)
|||||||++|+|++|.+|+.... ....+..+..+.++. ..++.+.+++.+
T Consensus 213 Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~ 262 (289)
T 1x8b_A 213 DIFALALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQ---------------------------VLSQEFTELLKV 262 (289)
T ss_dssp HHHHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSS---------------------------CCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCc---------------------------ccCHHHHHHHHH
Confidence 99999999999999988775432 233343333322211 345679999999
Q ss_pred hcccCCCCCCCHHHHHHHHHhhcCC
Q 001142 1112 CTEENPTERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1112 CL~~DP~~RPSa~EVL~~L~~~~ss 1136 (1142)
||+.||++|||+.|+++|+|+...+
T Consensus 263 ~l~~dp~~Rps~~~ll~h~~~~~~~ 287 (289)
T 1x8b_A 263 MIHPDPERRPSAMALVKHSVLLSAS 287 (289)
T ss_dssp HTCSSGGGSCCHHHHHTCTTC----
T ss_pred HhCCCcccCCCHHHHhhChHhhhhc
Confidence 9999999999999999999998654
No 108
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.9e-38 Score=364.98 Aligned_cols=262 Identities=24% Similarity=0.385 Sum_probs=210.9
Q ss_pred CCCcceeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 875 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~---------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 875 (1142)
.++|.+.++||+|+||.||+|++.+ ..+|+|+.... ......+.+ .+|+++++++ +|||||++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~----~~E~~~l~~l~~hpnIv~~ 140 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSDL----ISEMEMMKMIGKHKNIINL 140 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT---CCHHHHHHH----HHHHHHHHHHCCCTTBCCE
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc---cCHHHHHHH----HHHHHHHHHhcCCchhhhh
Confidence 3579999999999999999999632 35788875422 223333344 7999999999 89999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 944 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----------~~~~ls~~~i~~Ia~qIa~gL~y 944 (1142)
++++.+.+.. ++||||+++++|.+++...... ....+++..++.|+.||+.||.|
T Consensus 141 ~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 206 (382)
T 3tt0_A 141 LGACTQDGPL--------------YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 206 (382)
T ss_dssp EEEECSSSSC--------------EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eeeeccCCce--------------EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHH
Confidence 9999876544 9999999999999999873211 12459999999999999999999
Q ss_pred HHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 945 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 945 LHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
||++||+||||||+|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+
T Consensus 207 LH~~~ivH~Dlkp~NIll~~~-------~~~kL~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~---- 267 (382)
T 3tt0_A 207 LASKKCIHRDLAARNVLVTED-------NVMKIADFGLARDIHHIDYY--------KKTTNGRLPVKWMAPEALFD---- 267 (382)
T ss_dssp HHHTTCCCSCCCGGGEEECTT-------CCEEECSCSCCCCSSCCCTT--------CCCTTCCCGGGGSCHHHHHS----
T ss_pred HHhCCEecCCCCcceEEEcCC-------CcEEEcccCccccccccccc--------ccccCCCCCcceeCHHHhcC----
Confidence 999999999999999999887 78999999999765432111 11223457889999999876
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001142 1025 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1103 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1142)
..++.++|||||||++|+|++ |..||.+....++...+..+..+..+. ..++
T Consensus 268 ~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 320 (382)
T 3tt0_A 268 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS---------------------------NCTN 320 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCS---------------------------SCCH
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCH
Confidence 568899999999999999999 999999888877777776554332211 4456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1104 FLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1104 ~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
.+.+|+.+||+.||++|||+.||++++....
T Consensus 321 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 321 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 7999999999999999999999999987653
No 109
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.9e-38 Score=349.36 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=193.6
Q ss_pred CCCcceeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
..+|++.+.||+|+||.||+|.+.. ..+|+|+ .+.. ......+. +.+|+.++++++||||+++++++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~--~~~~-~~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~ 86 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKT--CKNC-TSDSVREK----FLQEALTMRQFDHPHIVKLIGVIT 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEE--CTTT-TSHHHHHH----HHHHHHHHHTCCCTTBCCEEEEEC
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEe--cccc-CCHHHHHH----HHHHHHHHHhCCCCccceEEEEEc
Confidence 4579999999999999999999843 2355554 3321 12222333 489999999999999999999975
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+. ..++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||
T Consensus 87 ~~---------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni 147 (281)
T 1mp8_A 87 EN---------------PVWIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNV 147 (281)
T ss_dssp SS---------------SCEEEEECCTTEEHHHHHHH----TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred cC---------------ccEEEEecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHE
Confidence 32 23899999999999999975 234689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||+++........ ......+|+.|+|||++.+ ..++.++||||||+++
T Consensus 148 l~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l 207 (281)
T 1mp8_A 148 LVSSN-------DCVKLGDFGLSRYMEDSTYY---------KASKGKLPIKWMAPESINF----RRFTSASDVWMFGVCM 207 (281)
T ss_dssp EEEET-------TEEEECC----------------------------CCGGGCCHHHHHH----CCCSHHHHHHHHHHHH
T ss_pred EECCC-------CCEEECccccccccCccccc---------ccccCCCcccccChhhccc----CCCCCccCchHHHHHH
Confidence 99987 78999999999765432111 1123357789999999876 5688999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|||++ |..||.+....+....+..+..+..+ ...++.+.+++.+||+.||++
T Consensus 208 ~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~p~~ 260 (281)
T 1mp8_A 208 WEILMHGVKPFQGVKNNDVIGRIENGERLPMP---------------------------PNCPPTLYSLMTKCWAYDPSR 260 (281)
T ss_dssp HHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHccCChhh
Confidence 99997 99999887766666666554332221 145567999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001142 1120 RPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~ 1133 (1142)
|||+.|+++++...
T Consensus 261 Rps~~~l~~~l~~~ 274 (281)
T 1mp8_A 261 RPRFTELKAQLSTI 274 (281)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHH
Confidence 99999999998764
No 110
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.5e-38 Score=361.84 Aligned_cols=258 Identities=27% Similarity=0.403 Sum_probs=206.6
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.|++.+.||+|+||+||+|++ .+..||+|+...... ......+. +.+|+.++++++||||+++++++.+.+
T Consensus 55 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~-~~~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~-- 127 (348)
T 1u5q_A 55 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQD----IIKEVRFLQKLRHPNTIQYRGCYLREH-- 127 (348)
T ss_dssp HEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSS-CHHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEETT--
T ss_pred heeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccc-cchHHHHH----HHHHHHHHHhCCCCCEeeEEEEEEECC--
Confidence 489999999999999999997 466778887543211 11222233 479999999999999999999998654
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||++ |+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 128 ------------~~~lv~e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~ 190 (348)
T 1u5q_A 128 ------------TAWLVMEYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 190 (348)
T ss_dssp ------------EEEEEEECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETT
T ss_pred ------------eEEEEEecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCC
Confidence 3599999997 7888888642 3468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||++...... ....||+.|+|||++.+.. ...++.++|||||||++|||++
T Consensus 191 -------~~~kL~DfG~a~~~~~~--------------~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~ell~ 248 (348)
T 1u5q_A 191 -------GLVKLGDFGSASIMAPA--------------NSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAE 248 (348)
T ss_dssp -------TEEEECCCTTCBSSSSB--------------CCCCSCGGGCCHHHHHTTS-SCCBCTHHHHHHHHHHHHHHHH
T ss_pred -------CCEEEeeccCceecCCC--------------CcccCCcceeCHhhhcccc-CCCCCcHHHHHHHHHHHHHHHh
Confidence 78999999999654321 1346899999999986321 2467899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001142 1046 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1125 (1142)
Q Consensus 1046 G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~E 1125 (1142)
|+.||.+.........+.....+.... ...++.+.+|+.+||+.||.+|||+++
T Consensus 249 g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dP~~Rps~~~ 302 (348)
T 1u5q_A 249 RKPPLFNMNAMSALYHIAQNESPALQS--------------------------GHWSEYFRNFVDSCLQKIPQDRPTSEV 302 (348)
T ss_dssp SSCTTTTSCHHHHHHHHHHSCCCCCCC--------------------------TTSCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCCCCCChHHHHHHHHhcCCCCCCC--------------------------CCCCHHHHHHHHHHcccChhhCcCHHH
Confidence 999998877766555554443322110 134567899999999999999999999
Q ss_pred HHHHHHhhcCCC
Q 001142 1126 LYEMFVARTSSS 1137 (1142)
Q Consensus 1126 VL~~L~~~~ss~ 1137 (1142)
+++|+|+.....
T Consensus 303 ll~h~~~~~~~~ 314 (348)
T 1u5q_A 303 LLKHRFVLRERP 314 (348)
T ss_dssp HTTCHHHHSCCC
T ss_pred HhhChhhhccCC
Confidence 999999986543
No 111
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.3e-39 Score=354.84 Aligned_cols=261 Identities=22% Similarity=0.334 Sum_probs=185.0
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.+++|++.+.||+|+||.||+|++ .+..+|+|+..... .........+.+|+.++++++||||+++++++.+.
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 83 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA-----MYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS 83 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhh-----hhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC
Confidence 456899999999999999999997 56778998864321 11112223458999999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+ ..++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 84 ~--------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili 145 (278)
T 3cok_A 84 N--------------YVYLVLEMCHNGEMNRYLKN----RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL 145 (278)
T ss_dssp S--------------EEEEEEECCTTEEHHHHHHT----CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE
T ss_pred C--------------eEEEEEecCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 4 35999999999999999874 23568999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||.+........ ......||+.|+|||++.+ ..++.++||||||+++|+
T Consensus 146 ~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 204 (278)
T 3cok_A 146 TRN-------MNIKIADFGLATQLKMPHE----------KHYTLCGTPNYISPEIATR----SAHGLESDVWSLGCMFYT 204 (278)
T ss_dssp CTT-------CCEEECCCTTCEECC------------------------------------------CTHHHHHHHHHHH
T ss_pred cCC-------CCEEEEeecceeeccCCCC----------cceeccCCCCcCCcchhcC----CCCCchhhHHHHHHHHHH
Confidence 877 7899999999976542211 1123468999999999875 567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|+.||......+....+.... ... +...+..+.+++.+||+.||++|||
T Consensus 205 l~~g~~p~~~~~~~~~~~~~~~~~-------------------------~~~---~~~~~~~~~~li~~~l~~dp~~Rps 256 (278)
T 3cok_A 205 LLIGRPPFDTDTVKNTLNKVVLAD-------------------------YEM---PSFLSIEAKDLIHQLLRRNPADRLS 256 (278)
T ss_dssp HHHSSCSSCCCSCC-----CCSSC-------------------------CCC---CTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHhCCCCCCChhHHHHHHHHhhcc-------------------------cCC---ccccCHHHHHHHHHHcccCHhhCCC
Confidence 999999997654332222111100 000 0134567899999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001142 1123 AGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1123 a~EVL~~L~~~~ss~ 1137 (1142)
++++++|+|+.....
T Consensus 257 ~~~~l~h~~~~~~~~ 271 (278)
T 3cok_A 257 LSSVLDHPFMSRNSS 271 (278)
T ss_dssp HHHHTTSTTTC----
T ss_pred HHHHhcCccccCCCC
Confidence 999999999986543
No 112
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.5e-38 Score=367.40 Aligned_cols=295 Identities=18% Similarity=0.187 Sum_probs=207.7
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||+||+|.+ .+..+|+|+...... .. .+|+.+++.++|||||++++++....
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~----~~E~~il~~l~hpnIv~l~~~~~~~~ 73 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YK----NRELDIMKVLDHVNIIKLVDYFYTTG 73 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SC----CHHHHHHTTCCCTTBCCEEEEEEEC-
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hH----HHHHHHHHHcCCCCccchhheeeecC
Confidence 45799999999999999999988 567788887542211 11 37999999999999999999986532
Q ss_pred CCCCC-----------CC-------------CCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Q 001142 884 WLPSA-----------DG-------------NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVA 939 (1142)
Q Consensus 884 ~~~~~-----------~~-------------~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa 939 (1142)
..... .+ .......+.++||||++ ++|.+.+...... ...+++..+..++.||+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 74 DEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLF 151 (383)
T ss_dssp ------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHH
Confidence 10000 00 00012335789999998 6999888764433 35799999999999999
Q ss_pred HHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhc
Q 001142 940 AALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR 1019 (1142)
Q Consensus 940 ~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 1019 (1142)
.||.|||++||+||||||+|||++... +.+||+|||+|+...... ......||+.|+|||++.
T Consensus 152 ~aL~~LH~~gi~H~Dikp~Nil~~~~~------~~~kl~Dfg~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~ 214 (383)
T 3eb0_A 152 RAVGFIHSLGICHRDIKPQNLLVNSKD------NTLKLCDFGSAKKLIPSE-----------PSVAYICSRFYRAPELML 214 (383)
T ss_dssp HHHHHHHTTTEECSCCCGGGEEEETTT------TEEEECCCTTCEECCTTS-----------CCCCCCCCSSCCCHHHHT
T ss_pred HHHHHHHHCcCccCccCHHHEEEcCCC------CcEEEEECCCCcccCCCC-----------CCcCcccCCCccCHHHhc
Confidence 999999999999999999999997431 789999999997653321 112346899999999987
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhh
Q 001142 1020 AMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1098 (1142)
Q Consensus 1020 ~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1142)
+ ...++.++|||||||++|||++|+.||.+.+..+....+ .....+................+.......-.....
T Consensus 215 ~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (383)
T 3eb0_A 215 G---ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP 291 (383)
T ss_dssp T---CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSC
T ss_pred C---CCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCC
Confidence 5 245889999999999999999999999988777665555 333333222111111000000000000000000011
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1099 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1099 ~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
...++.+.+|+.+||+.||.+|||+.|+++|+|+..
T Consensus 292 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327 (383)
T ss_dssp TTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence 145677999999999999999999999999999963
No 113
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=8.6e-39 Score=377.72 Aligned_cols=268 Identities=20% Similarity=0.281 Sum_probs=199.5
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|.+.+.||+|+||+||+|.+. +..+|+|+...+...............+.+|+.++++++|||||++++++...
T Consensus 135 ~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~-- 212 (419)
T 3i6u_A 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE-- 212 (419)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS--
T ss_pred ccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC--
Confidence 57999999999999999999984 56889998765432222211111122347999999999999999999998642
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 213 -------------~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~ 274 (419)
T 3i6u_A 213 -------------DYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 274 (419)
T ss_dssp -------------EEEEEEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS
T ss_pred -------------ceEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEec
Confidence 24899999999999888753 357999999999999999999999999999999999999975
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
++ ....+||+|||+++...... ......||+.|+|||++.+.. ...++.++|||||||++|+|+
T Consensus 275 ~~----~~~~~kl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~~ll 338 (419)
T 3i6u_A 275 QE----EDCLIKITDFGHSKILGETS-----------LMRTLCGTPTYLAPEVLVSVG-TAGYNRAVDCWSLGVILFICL 338 (419)
T ss_dssp SS----SSCCEEECCSSTTTSCC----------------------CTTCCTTTTC-----CTTHHHHHHHHHHHHHHHHH
T ss_pred CC----CcceEEEeecccceecCCCc-----------cccccCCCCCccCceeeecCC-CCCCCchhhhHhHHHHHHHHH
Confidence 42 12569999999997654321 112456999999999985321 246789999999999999999
Q ss_pred hCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 TLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+|+.||...... .....+..+.....+..+ ...++.+.+|+.+||+.||.+|||+
T Consensus 339 tg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~Rps~ 394 (419)
T 3i6u_A 339 SGYPPFSEHRTQVSLKDQITSGKYNFIPEVW------------------------AEVSEKALDLVKKLLVVDPKARFTT 394 (419)
T ss_dssp HSSCSSCCCSSSCCHHHHHHTTCCCCCHHHH------------------------TTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HCCCCCCCCcchHHHHHHHhcCCCCCCchhh------------------------cccCHHHHHHHHHHccCChhHCcCH
Confidence 999999764322 234444444333222211 1456679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001142 1124 GDLYEMFVART 1134 (1142)
Q Consensus 1124 ~EVL~~L~~~~ 1134 (1142)
+|+++|+|++.
T Consensus 395 ~e~l~hp~~~~ 405 (419)
T 3i6u_A 395 EEALRHPWLQD 405 (419)
T ss_dssp HHHHHSGGGCC
T ss_pred HHHhCCcccCC
Confidence 99999999974
No 114
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=4.3e-38 Score=351.96 Aligned_cols=266 Identities=24% Similarity=0.357 Sum_probs=199.3
Q ss_pred CCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhh--CCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~--L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||+||+|++.+..+|+|++... ....+ .+|.+++.. ++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-------~~~~~----~~e~~~~~~~~l~h~niv~~~~~~~~~~ 75 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR-------DEKSW----FRETELYNTVMLRHENILGFIASDMTSR 75 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG-------GHHHH----HHHHHHHHHTCCCCTTBCCEEEEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc-------cchhh----HHHHHHHHHhhccCcCeeeEEEeecccc
Confidence 457999999999999999999999999999986422 11222 456666655 78999999999876532
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCccccCC
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDI 955 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLH--------s~gIvHrDL 955 (1142)
. .....++||||+++|+|.++++. ..+++..+..|+.||+.||+||| ++||+||||
T Consensus 76 ~----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dl 139 (301)
T 3q4u_A 76 H----------SSTQLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDL 139 (301)
T ss_dssp T----------TEEEEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCC
T ss_pred C----------CCceeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCC
Confidence 1 12356999999999999999953 46999999999999999999999 999999999
Q ss_pred CCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC--CCCchhhH
Q 001142 956 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDI 1033 (1142)
Q Consensus 956 Kp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksDV 1033 (1142)
||+|||++.+ +.+||+|||+++.......... .......||+.|+|||++.+..... .++.++||
T Consensus 140 kp~Nill~~~-------~~~kl~Dfg~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv 206 (301)
T 3q4u_A 140 KSKNILVKKN-------GQCCIADLGLAVMHSQSTNQLD------VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206 (301)
T ss_dssp CGGGEEECTT-------SCEEECCCTTCEEEETTTTEEE------CCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHH
T ss_pred ChHhEEEcCC-------CCEEEeeCCCeeeccccccccc------ccccccccccceeChhhhcCcCCCCcccCCchhhH
Confidence 9999999877 7899999999976543221110 0122346999999999997632111 34579999
Q ss_pred HHHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHH-hCCCCCchhHHhhhcccccccccccCCCCCCchh
Q 001142 1034 WSYGCLLLELLTL----------QVPYMGLS-----ELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA 1097 (1142)
Q Consensus 1034 wSLGviL~ELLtG----------~~Pf~~~~-----~~el~~~I~-~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1142)
|||||++|||++| +.||.... .......+. ....+..+. ...
T Consensus 207 wslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~ 264 (301)
T 3q4u_A 207 WAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPN----------------------RWF 264 (301)
T ss_dssp HHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCG----------------------GGG
T ss_pred HHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCCh----------------------hhc
Confidence 9999999999999 88885421 122222221 111221111 011
Q ss_pred hhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1098 ELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1098 ~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
....++.+.+|+.+||+.||.+|||+.||++.+...
T Consensus 265 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 265 SDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp GSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 125678899999999999999999999999988653
No 115
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3e-38 Score=353.32 Aligned_cols=275 Identities=23% Similarity=0.331 Sum_probs=198.8
Q ss_pred CCCcceeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
-.+|++.++||+|+||+||+|++ .+..+|+|+... ......+.+ .+|+.++++++||||+++++++
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~ 80 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STEEHLRDF----EREIEILKSLQHDNIVKYKGVC 80 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC----CCHHHHHHH----HHHHHHHHTCCCTTBCCEEEEE
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc----CCHHHHHHH----HHHHHHHHhCCCCCEeeEEEEE
Confidence 45799999999999999999985 456788887532 123333444 7999999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
...+. ...++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 81 ~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~N 144 (295)
T 3ugc_A 81 YSAGR------------RNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 144 (295)
T ss_dssp CHHHH------------TSCEEEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred ecCCC------------CceEEEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhh
Confidence 65321 1349999999999999999862 2358999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||++......... ........+|..|+|||++.+ ..++.++||||||++
T Consensus 145 il~~~~-------~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~ 206 (295)
T 3ugc_A 145 ILVENE-------NRVKIGDFGLTKVLPQDKEF-------FKVKEPGESPIFWYAPESLTE----SKFSVASDVWSFGVV 206 (295)
T ss_dssp EEEEET-------TEEEECCCCSCC--------------------CTTCGGGGCCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CeEEEccCcccccccCCcce-------eeeccCCCCccceeCcHHhcC----CCCChHHHHHHHHHH
Confidence 999987 78999999999765432211 011223357788999999976 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|+|++|..||... ..+....+......... ..... .......... ....+++.+.+++.+||+.||++
T Consensus 207 l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~ 275 (295)
T 3ugc_A 207 LYELFTYIEKSKSP-PAEFMRMIGNDKQGQMI-VFHLI------ELLKNNGRLP---RPDGCPDEIYMIMTECWNNNVNQ 275 (295)
T ss_dssp HHHHHHTTCTTCSH-HHHHHHHHCTTCCTHHH-HHHHH------HHHHTTCCCC---CCTTCCHHHHHHHHHHSCSSGGG
T ss_pred HHHHHhcccccCCC-hHHHHhhhcCccccchh-HHHHH------HHHhccCcCC---CCcCcCHHHHHHHHHHcCCChhh
Confidence 99999999998742 22222222111110000 00000 0000000000 11256678999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001142 1120 RPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~ 1133 (1142)
|||+.|+++.+...
T Consensus 276 Rps~~el~~~L~~l 289 (295)
T 3ugc_A 276 RPSFRDLALRVDQI 289 (295)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999999988764
No 116
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=4.3e-38 Score=355.22 Aligned_cols=273 Identities=26% Similarity=0.326 Sum_probs=198.0
Q ss_pred CCCccee-eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001142 806 FPSLSSC-DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 881 (1142)
Q Consensus 806 ~~~y~l~-~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~ 881 (1142)
-+.|++. +.||+|+||.||+|.+ .+..+|+|+..... . ...+. +.+|+.++.++ +||||+++++++.+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~--~~~~~----~~~E~~~l~~~~~h~~i~~~~~~~~~ 82 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--G--HIRSR----VFREVEMLYQCQGHRNVLELIEFFEE 82 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--S--CCHHH----HHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--c--hhHHH----HHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3568885 7899999999999987 46788888864321 1 11222 37899999985 79999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 83 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil 143 (316)
T 2ac3_A 83 ED--------------RFYLVFEKMRGGSILSHIHK-----RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143 (316)
T ss_dssp TT--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred CC--------------EEEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEE
Confidence 55 45999999999999999976 246899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL 1040 (1142)
++.++ ....+||+|||++............ .........||+.|+|||++.+.. ....++.++|||||||++
T Consensus 144 ~~~~~----~~~~~kl~Dfg~~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il 216 (316)
T 2ac3_A 144 CEHPN----QVSPVKICDFDLGSGIKLNGDCSPI---STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216 (316)
T ss_dssp ESCSS----SSCSEEECCTTCCC----------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHH
T ss_pred EccCC----CcCceEEEEccCccccccCCccccc---cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHH
Confidence 98762 1134999999999765322111000 011122346999999999986411 012467899999999999
Q ss_pred HHHHhCCCCCCCCCH---------------HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHH
Q 001142 1041 LELLTLQVPYMGLSE---------------LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1105 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~---------------~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1105 (1142)
|+|++|+.||.+... ..+...+..+....... .....++.+
T Consensus 217 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~ 272 (316)
T 2ac3_A 217 YILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK------------------------DWAHISCAA 272 (316)
T ss_dssp HHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHH------------------------HHTTSCHHH
T ss_pred HHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCch------------------------hcccCCHHH
Confidence 999999999976431 22333443332211110 001456679
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 001142 1106 VDVFRRCTEENPTERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1106 ~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ss 1136 (1142)
.+|+.+||+.||.+|||+.|+++|+|++...
T Consensus 273 ~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred HHHHHHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 9999999999999999999999999998653
No 117
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=4.7e-38 Score=352.76 Aligned_cols=267 Identities=21% Similarity=0.276 Sum_probs=207.2
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+.+|++.+.||+|+||.||+|.+ .+..+|+|+............ ...+.+|+.++++++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 79 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNG----EANVKKEIQLLRRLRHKNVIQLVDVLYNEE 79 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTH----HHHHHHHHHHHTTCCCTTBCCEEEEEECC-
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchh----HHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Confidence 46899999999999999999998 456788888653321111111 234489999999999999999999986422
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
....++||||++++ |.+++... ....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 80 ------------~~~~~lv~e~~~~~-l~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~ 143 (305)
T 2wtk_C 80 ------------KQKMYMVMEYCVCG-MQEMLDSV---PEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT 143 (305)
T ss_dssp --------------CEEEEEECCSEE-HHHHHHHS---TTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred ------------CCeEEEEehhccCC-HHHHHHhC---cccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc
Confidence 12459999999855 88887652 345799999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||.+......... .......||+.|+|||++.+. ...++.++||||||+++|+|
T Consensus 144 ~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~--~~~~~~~~Di~slG~il~~l 206 (305)
T 2wtk_C 144 TG-------GTLKISALGVAEALHPFAAD--------DTCRTSQGSPAFQPPEIANGL--DTFSGFKVDIWSAGVTLYNI 206 (305)
T ss_dssp TT-------CCEEECCCTTCEECCTTCSS--------CEECCCCSCGGGCCHHHHTCC--SCEESHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEeeccccccccCccccc--------cccccCCCCCCCcChhhccCc--ccCCcchhhHHHHHHHHHHH
Confidence 77 78999999999765432111 011234589999999998752 12346899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||.+....+....+..+.... + ...++.+.+++.+||+.||.+|||+
T Consensus 207 ~~g~~p~~~~~~~~~~~~i~~~~~~~-~---------------------------~~~~~~l~~li~~~l~~dp~~Rps~ 258 (305)
T 2wtk_C 207 TTGLYPFEGDNIYKLFENIGKGSYAI-P---------------------------GDCGPPLSDLLKGMLEYEPAKRFSI 258 (305)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHCCCCC-C---------------------------SSSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred HhCCCCCCCchHHHHHHHHhcCCCCC-C---------------------------CccCHHHHHHHHHHccCChhhCCCH
Confidence 99999999877777666665443211 0 0345678999999999999999999
Q ss_pred HHHHHHHHhhcCCC
Q 001142 1124 GDLYEMFVARTSSS 1137 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss~ 1137 (1142)
.|+++|+|++....
T Consensus 259 ~~ll~~~~~~~~~~ 272 (305)
T 2wtk_C 259 RQIRQHSWFRKKHP 272 (305)
T ss_dssp HHHHHSHHHHSCCC
T ss_pred HHHhcCcccccCCC
Confidence 99999999986544
No 118
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.1e-38 Score=368.83 Aligned_cols=257 Identities=25% Similarity=0.386 Sum_probs=207.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||.||+|++. +..||+|+.+ .. ......+.+ .+|+.++++++|||||++++++...+
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~--~~-~~~~~~~~~----~~E~~~l~~l~hpniv~~~~~~~~~~ 185 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ET-LPPDLKAKF----LQEARILKQYSHPNIVRLIGVCTQKQ 185 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECC--TT-SCHHHHTTT----THHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcc--cc-CCHHHHHHH----HHHHHHHHhCCCCCEEEEEEEEecCC
Confidence 457999999999999999999995 6677887643 21 223333344 79999999999999999999997655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. ++||||+++|+|.++++.. ...+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 186 ~~--------------~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~ 247 (377)
T 3cbl_A 186 PI--------------YIVMELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT 247 (377)
T ss_dssp SC--------------EEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred Cc--------------EEEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc
Confidence 43 9999999999999999762 23589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+++........ .......+++.|+|||++.+ ..++.++|||||||++|||
T Consensus 248 ~~-------~~~kl~DfG~s~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~il~el 308 (377)
T 3cbl_A 248 EK-------NVLKISDFGMSREEADGVYA--------ASGGLRQVPVKWTAPEALNY----GRYSSESDVWSFGILLWET 308 (377)
T ss_dssp TT-------CCEEECCGGGCEECTTSEEE--------CCSSCCEEEGGGSCHHHHHH----CEEEHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEECcCCCceecCCCcee--------ecCCCCCCCcCcCCHhHhcc----CCCCchhhHHHHHHHHHHH
Confidence 77 78999999999754332111 01112235778999999876 4678999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |..||.+....+....+..+..+..+. .+++.+.+|+.+||+.||++|||
T Consensus 309 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~Rps 361 (377)
T 3cbl_A 309 FSLGASPYPNLSNQQTREFVEKGGRLPCPE---------------------------LCPDAVFRLMEQCWAYEPGQRPS 361 (377)
T ss_dssp HTTSCCSSTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCchhCcC
Confidence 98 999999888777776665554332221 34567999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001142 1123 AGDLYEMFVAR 1133 (1142)
Q Consensus 1123 a~EVL~~L~~~ 1133 (1142)
+.++++.+...
T Consensus 362 ~~~i~~~L~~i 372 (377)
T 3cbl_A 362 FSTIYQELQSI 372 (377)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988654
No 119
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=5.6e-38 Score=352.94 Aligned_cols=259 Identities=24% Similarity=0.243 Sum_probs=207.0
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|++. +..+|+|+..... ....+. +.+|+.++++++||||+++++++.+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP----AFRDSS----LENEIAVLKKIKHENIVTLEDIYESTT- 79 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------H----HHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc----ccchHH----HHHHHHHHHhCCCCCeeehhhhcccCC-
Confidence 36899999999999999999984 6778888865321 111223 378999999999999999999988654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++..
T Consensus 80 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~ 141 (304)
T 2jam_A 80 -------------HYYLVMQLVSGGELFDRILE-----RGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLT 141 (304)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESS
T ss_pred -------------EEEEEEEcCCCccHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEec
Confidence 45999999999999999876 246899999999999999999999999999999999999932
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
. ...+.+||+|||.+...... ......||+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 142 ~----~~~~~~kl~Dfg~~~~~~~~------------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 201 (304)
T 2jam_A 142 P----EENSKIMITDFGLSKMEQNG------------IMSTACGTPGYVAPEVLAQ----KPYSKAVDCWSIGVITYILL 201 (304)
T ss_dssp S----STTCCEEBCSCSTTCCCCCB------------TTHHHHSCCCBCCTTTBSS----CSCCHHHHHHHHHHHHHHHH
T ss_pred C----CCCCCEEEccCCcceecCCC------------ccccccCCCCccChHHhcc----CCCCchhhHHHHHHHHHHHH
Confidence 1 11278999999998653321 1123458999999999875 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|..||.+....+....+..+....... .....++.+.+++.+||+.||.+|||+.
T Consensus 202 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ 257 (304)
T 2jam_A 202 CGYPPFYEETESKLFEKIKEGYYEFESP------------------------FWDDISESAKDFICHLLEKDPNERYTCE 257 (304)
T ss_dssp HSSCTTTTSCHHHHHHHHHHCCCCCCTT------------------------TTTTSCHHHHHHHHHHHCSSTTTSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHcCCCCCCcc------------------------ccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 9999999887777777765543221100 0014566799999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 001142 1125 DLYEMFVARTSS 1136 (1142)
Q Consensus 1125 EVL~~L~~~~ss 1136 (1142)
|+++|+|+....
T Consensus 258 ~~l~h~~~~~~~ 269 (304)
T 2jam_A 258 KALSHPWIDGNT 269 (304)
T ss_dssp HHHTSHHHHSSC
T ss_pred HHhcCccccCCC
Confidence 999999998654
No 120
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.7e-38 Score=362.31 Aligned_cols=284 Identities=17% Similarity=0.225 Sum_probs=204.0
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||.||+|.+. +..+|+|+.... .......+.+ .+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~hpniv~~~~~~~~~~ 97 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP--FQNQTHAKRA----YRELVLMKCVNHKNIIGLLNVFTPQK 97 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECT--TSSHHHHHHH----HHHHHHHHHCCCTTBCCEEEEECSCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccc--cCChHHHHHH----HHHHHHHHhcCCCCccceEEeecccc
Confidence 468999999999999999999874 667888875422 2233333333 79999999999999999999987644
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. ......++||||++ ++|.+++.. .+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 98 ~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~ 161 (371)
T 2xrw_A 98 SL--------EEFQDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 161 (371)
T ss_dssp ST--------TTCCEEEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred cc--------ccccceEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc
Confidence 22 12336799999997 688888752 489999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 162 ~~-------~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el 219 (371)
T 2xrw_A 162 SD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGEM 219 (371)
T ss_dssp TT-------SCEEECCCCC---------------------------CTTCCHHHHTT----CCCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEEeeccccccccc-----------ccCCceecCCccCHHHhcC----CCCCchHhHHHHHHHHHHH
Confidence 87 789999999997543211 1123468999999999976 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCC---------------CCchhhhhhHHHHHHH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGF---------------EKPEAELETLSFLVDV 1108 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~L~dL 1108 (1142)
++|+.||.+.+..+....+........+........... ........+ .........+..+.+|
T Consensus 220 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 298 (371)
T 2xrw_A 220 IKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVR-TYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 298 (371)
T ss_dssp HHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHH-HHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHH-HHHhhCccccccchhhhcccccCcccccccccccHHHHHH
Confidence 999999998887776666644433322221111100000 000000000 0011112346789999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1109 FRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1109 I~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
|.+||+.||.+|||++|+++|+|+..
T Consensus 299 i~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 299 LSKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp HHHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred HHHHCcCChhhCCCHHHHhCCcchhh
Confidence 99999999999999999999999974
No 121
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=7.1e-38 Score=350.25 Aligned_cols=284 Identities=19% Similarity=0.278 Sum_probs=207.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
+++|++.+.||+|+||.||+|++. +..+|+|+..... ..... ...+.+|+.++++++||||+++++++...+
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGV----PSTAIREISLLKELNHPNIVKLLDVIHTEN 75 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----------C----CHHHHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCc--cchhh----HHHHHHHHHHHHHcCCCCeeeEEEEEecCC
Confidence 678999999999999999999984 6678888754321 11111 123478999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||++ ++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 76 --------------~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~ 137 (299)
T 2r3i_A 76 --------------KLYLVFEFLH-QDLKKFMDA---SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN 137 (299)
T ss_dssp --------------EEEEEEECCS-EEHHHHHHH---TTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred --------------ceEEEEEccc-CCHHHHHHh---hhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEc
Confidence 3599999997 799999976 2234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||.+........ ......||+.|+|||++.+ ...++.++||||||+++|+|
T Consensus 138 ~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~~l~~l 197 (299)
T 2r3i_A 138 TE-------GAIKLADFGLARAFGVPVR----------TYTHEVVTLWYRAPEILLG---AKYYSTAVDIWSLGCIFAEM 197 (299)
T ss_dssp TT-------SCEEECSTTHHHHHCCCSB----------CTTSCBCCCTTCCHHHHTT---CSSCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEECcchhhhhccCCcc----------ccCcccccccccCcHHhhc---cccCChHHHHHHHHHHHHHH
Confidence 87 7899999999976543211 1123468999999999875 23478999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccccCCCCCC---chhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEK---PEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
++|+.||.+....+....+... ..+... .+....... ........... .......++.+.+++.+||+.||++
T Consensus 198 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 274 (299)
T 2r3i_A 198 VTRRALFPGDSEIDQLFRIFRTLGTPDEV-VWPGVTSMP--DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNK 274 (299)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCTT-TSTTGGGST--TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTT
T ss_pred HhCCCCCCCccHHHHHHHHHHHhCCCchh-hhhHhhcCc--ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCccc
Confidence 9999999987776655444221 111100 000000000 00000000000 0011135678999999999999999
Q ss_pred CCCHHHHHHHHHhhcCC
Q 001142 1120 RPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ss 1136 (1142)
|||+.|+++|+|++...
T Consensus 275 Rpt~~~~l~hp~~~~~~ 291 (299)
T 2r3i_A 275 RISAKAALAHPFFQDVT 291 (299)
T ss_dssp SCCHHHHHTSGGGTTCC
T ss_pred CCCHHHHhcChhhhcCC
Confidence 99999999999998543
No 122
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.4e-38 Score=351.78 Aligned_cols=261 Identities=21% Similarity=0.355 Sum_probs=207.7
Q ss_pred CCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
..+|++.+.||+|+||.||+|.+. +..+|+|+.. .. ......+.+ .+|+.++++++||||++++++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~~----~~E~~~l~~l~hp~iv~~~~~ 94 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK--EN-ASPSELRDL----LSEFNVLKQVNHPHVIKLYGA 94 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECC--TT-CCHHHHHHH----HHHHHHHTTCCCTTBCCEEEE
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEecc--CC-CCHHHHHHH----HHHHHHHhhCCCCceeeEEEE
Confidence 457999999999999999999872 2567777643 21 223333444 799999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-------------------CCCCCCHHHHHHHHHHHH
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-------------------GEKHVSVKLALFIAQDVA 939 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-------------------~~~~ls~~~i~~Ia~qIa 939 (1142)
+.+.+.. ++||||+++++|.+++...... ....+++..++.++.||+
T Consensus 95 ~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 160 (314)
T 2ivs_A 95 CSQDGPL--------------LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160 (314)
T ss_dssp ECSSSSC--------------EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHH
T ss_pred EecCCce--------------EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHH
Confidence 9765543 9999999999999999863221 123489999999999999
Q ss_pred HHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhc
Q 001142 940 AALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR 1019 (1142)
Q Consensus 940 ~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 1019 (1142)
.||.|||++||+||||||+|||++.+ +.+||+|||++.......... ......+|+.|+|||++.
T Consensus 161 ~~l~~lH~~~ivH~dikp~NIli~~~-------~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~ 225 (314)
T 2ivs_A 161 QGMQYLAEMKLVHRDLAARNILVAEG-------RKMKISDFGLSRDVYEEDSYV--------KRSQGRIPVKWMAIESLF 225 (314)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEEETT-------TEEEECCCTTCEECTTTSCEE--------CSSCCCSCGGGCCHHHHH
T ss_pred HHHHHHHHCCCcccccchheEEEcCC-------CCEEEccccccccccccccce--------eccCCCCcccccChhhhc
Confidence 99999999999999999999999877 789999999997654322110 112335788999999987
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhh
Q 001142 1020 AMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1098 (1142)
Q Consensus 1020 ~~~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1142)
+ ..++.++||||||+++|+|++ |..||.+....++...+..+..+..+
T Consensus 226 ~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------- 274 (314)
T 2ivs_A 226 D----HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP--------------------------- 274 (314)
T ss_dssp H----CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCC---------------------------
T ss_pred C----CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCC---------------------------
Confidence 6 567899999999999999999 99999887776666666554432221
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1099 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1099 ~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
...++.+.+++.+||+.||.+|||+.++++++...
T Consensus 275 ~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 275 DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 14456799999999999999999999999998764
No 123
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=3e-38 Score=354.71 Aligned_cols=257 Identities=28% Similarity=0.407 Sum_probs=210.1
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
-+.|++.+.||+|+||.||+|.+ .+..+|+|+...... ....+.+ .+|+.++++++||||+++++++.+..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 93 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIEDI----QQEITVLSQCDSPYVTKYYGSYLKDT 93 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHHH----HHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHHH----HHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 34699999999999999999987 466788888654422 1222333 78999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 94 --------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~ 153 (303)
T 3a7i_A 94 --------------KLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 153 (303)
T ss_dssp --------------EEEEEEECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------eEEEEEEeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC
Confidence 35999999999999999853 4689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 154 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 212 (303)
T 3a7i_A 154 EH-------GEVKLADFGVAGQLTDTQI----------KRNTFVGTPFWMAPEVIKQ----SAYDSKADIWSLGITAIEL 212 (303)
T ss_dssp TT-------SCEEECCCTTCEECBTTBC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeecccceecCcccc----------ccCccCCCcCccCHHHHhc----CCCCchhhhHHHHHHHHHH
Confidence 77 7899999999976543211 1123468999999999875 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|+.||...........+.....+... ...+..+.+++.+||+.||.+|||+
T Consensus 213 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dp~~Rps~ 265 (303)
T 3a7i_A 213 ARGEPPHSELHPMKVLFLIPKNNPPTLE---------------------------GNYSKPLKEFVEACLNKEPSFRPTA 265 (303)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHSCCCCCC---------------------------SSCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred ccCCCCCCCcCHHHHHHHhhcCCCCCCc---------------------------cccCHHHHHHHHHHcCCChhhCcCH
Confidence 9999999887776666555444332221 1345669999999999999999999
Q ss_pred HHHHHHHHhhcCCC
Q 001142 1124 GDLYEMFVARTSSS 1137 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss~ 1137 (1142)
.++++|+|+.....
T Consensus 266 ~~ll~~~~~~~~~~ 279 (303)
T 3a7i_A 266 KELLKHKFILRNAK 279 (303)
T ss_dssp HHHTTCHHHHHHCC
T ss_pred HHHhhChhhhcCCC
Confidence 99999999975543
No 124
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4e-38 Score=362.94 Aligned_cols=280 Identities=23% Similarity=0.307 Sum_probs=206.8
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
...++|++.+.||+|+||.||+|.+. +..+|+|+..... .....+. +.+|+.++++++||||+++++++.+
T Consensus 30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~ 102 (360)
T 3eqc_A 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRNQ----IIRELQVLHECNSPYIVGFYGAFYS 102 (360)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHHH----HHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHHH----HHHHHHHHHHCCCCCEEEEeEEEEE
Confidence 33567999999999999999999985 6678888765331 2233333 4899999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCe
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENI 960 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDLKp~NI 960 (1142)
.+ ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++ ||+||||||+||
T Consensus 103 ~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Ni 163 (360)
T 3eqc_A 103 DG--------------EISICMEHMDGGSLDQVLKKA-----GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 163 (360)
T ss_dssp TT--------------EEEEEECCCTTCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGE
T ss_pred CC--------------EEEEEEECCCCCCHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHE
Confidence 55 359999999999999999762 4689999999999999999999996 999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||++....... .....||+.|+|||++.+ ..++.++|||||||++
T Consensus 164 l~~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 220 (360)
T 3eqc_A 164 LVNSR-------GEIKLCDFGVSGQLIDSM------------ANSFVGTRSYMSPERLQG----THYSVQSDIWSMGLSL 220 (360)
T ss_dssp EECTT-------CCEEECCCCCCHHHHHHC----------------CCCCTTCCHHHHTT----CCCSHHHHHHHHHHHH
T ss_pred EECCC-------CCEEEEECCCCccccccc------------ccCCCCCCCeECHHHHcC----CCCCchhhHHHHHHHH
Confidence 99887 789999999996543211 123468999999999876 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCC---CCCchhHHhhhcccc----------------cccccccCCCCCCchhhhhh
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGK---RPRLTDELEALGSCH----------------EHEVAQSGSGFEKPEAELET 1101 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~---~p~l~~~l~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~ 1101 (1142)
|+|++|+.||......+....+.... ....+.......... ........ . ........
T Consensus 221 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~ 297 (360)
T 3eqc_A 221 VEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEP-P--PKLPSGVF 297 (360)
T ss_dssp HHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSC-C--CCCCTTTS
T ss_pred HHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccC-C--CCCCcccc
Confidence 99999999998876655433321110 000000000000000 00000000 0 00011135
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1102 LSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1102 ~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+..+.+|+.+||+.||++|||++|+++|+|++..
T Consensus 298 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~ 331 (360)
T 3eqc_A 298 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 331 (360)
T ss_dssp CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHH
T ss_pred cHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcc
Confidence 6789999999999999999999999999999754
No 125
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=6.5e-38 Score=358.32 Aligned_cols=260 Identities=21% Similarity=0.283 Sum_probs=211.0
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+....+|.+.+.||+|+||.||+|.+. +..+|+|+...... ......+.+ .+|+.++++++||||+++++++.
T Consensus 37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~ 111 (335)
T 2owb_A 37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREKM----SMEISIHRSLAHQHVVGFHGFFE 111 (335)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHHHH----HHHHHHHHTCCCTTBCCEEEEEE
T ss_pred cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhh-cCHHHHHHH----HHHHHHHHhCCCCCCCeEEEEEe
Confidence 445667999999999999999999984 56788887653321 222333333 78999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 112 ~~~--------------~~~lv~e~~~~~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NI 172 (335)
T 2owb_A 112 DND--------------FVFVVLELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 172 (335)
T ss_dssp CSS--------------EEEEEECCCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred cCC--------------eEEEEEecCCCCCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhE
Confidence 654 35999999999999999876 24689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||+++
T Consensus 173 l~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 231 (335)
T 2owb_A 173 FLNED-------LEVKIGDFGLATKVEYDGE----------RKKVLCGTPNYIAPEVLSK----KGHSFEVDVWSIGCIM 231 (335)
T ss_dssp EECTT-------CCEEECCCTTCEECCSTTC----------CBCCCCSCCSSCCHHHHHT----SCBCTHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEeeccCceecccCcc----------cccccCCCccccCHHHhcc----CCCCchhhHHHHHHHH
Confidence 99887 7899999999976542111 1123468999999999876 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|+.||......+....+...... ++ ...++.+.+|+.+||+.||.+|
T Consensus 232 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~dp~~R 283 (335)
T 2owb_A 232 YTLLVGKPPFETSCLKETYLRIKKNEYS-IP---------------------------KHINPVAASLIQKMLQTDPTAR 283 (335)
T ss_dssp HHHHHSSCTTCCSSHHHHHHHHHHTCCC-CC---------------------------TTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHCcCCCCCCCHHHHHHHHhcCCCC-CC---------------------------ccCCHHHHHHHHHHccCChhHC
Confidence 9999999999887766665555433211 00 0344568999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||+.|+++|+|+...
T Consensus 284 ps~~ell~~~~~~~~ 298 (335)
T 2owb_A 284 PTINELLNDEFFTSG 298 (335)
T ss_dssp CCGGGGGGSHHHHTS
T ss_pred cCHHHHhcCccccCC
Confidence 999999999999754
No 126
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=3.4e-38 Score=362.50 Aligned_cols=263 Identities=23% Similarity=0.363 Sum_probs=203.7
Q ss_pred CCCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 876 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~ 876 (1142)
..++|++.+.||+|+||.||+|++. +..||+|+.... ......+.+ .+|++++.++ +|||||+++
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~----~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHRAL----MSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHHH----HHHHHHHHHHCCCTTBCCEE
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc---CCHHHHHHH----HHHHHHHHhhcCCcceeeee
Confidence 3467999999999999999999852 256788875321 223333344 8999999999 799999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccC----------------------------------
Q 001142 877 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG---------------------------------- 922 (1142)
Q Consensus 877 g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~---------------------------------- 922 (1142)
+++.+.+. ..++||||+++|+|.++++......
T Consensus 93 ~~~~~~~~-------------~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (359)
T 3vhe_A 93 GACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSS 159 (359)
T ss_dssp EEECSTTS-------------CCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------
T ss_pred eeeecCCC-------------ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcc
Confidence 99876432 2499999999999999997632100
Q ss_pred ---------------------------CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeE
Q 001142 923 ---------------------------EKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVV 975 (1142)
Q Consensus 923 ---------------------------~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~v 975 (1142)
...+++..+..|+.||+.||.|||++||+||||||+|||++.+ +.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~-------~~~ 232 (359)
T 3vhe_A 160 QSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-------NVV 232 (359)
T ss_dssp ------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG-------GCE
T ss_pred ccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC-------CcE
Confidence 1228999999999999999999999999999999999999877 789
Q ss_pred EEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 001142 976 KLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLS 1054 (1142)
Q Consensus 976 KL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~ 1054 (1142)
||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||++ |..||.+..
T Consensus 233 kl~Dfg~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 300 (359)
T 3vhe_A 233 KICDFGLARDIYKDPDY--------VRKGDARLPLKWMAPETIFD----RVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 300 (359)
T ss_dssp EECCCGGGSCTTSCTTC--------EEC--CEECGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred EEEeccceeeecccccc--------hhccccCCCceeEChhhhcC----CCCCchhhhhhHHHHHHHHHhcCCCCCCccc
Confidence 99999999765332111 11224468899999999876 568899999999999999998 999998755
Q ss_pred HHH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1055 ELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1055 ~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
..+ ....+..+..+..+. ..++.+.+++.+||+.||.+|||+.|+++|+...
T Consensus 301 ~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 301 IDEEFCRRLKEGTRMRAPD---------------------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp CSHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 333 334444433322211 3456799999999999999999999999998764
No 127
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=8.8e-38 Score=343.35 Aligned_cols=256 Identities=21% Similarity=0.354 Sum_probs=208.0
Q ss_pred CCCcceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..+|++.+.||+|+||.||+|.+ .+..+|+|+..... .. .+.+ .+|+.++++++||||+++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~---~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~ 77 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MS---EEDF----IEEAEVMMKLSHPKLVQLYGVCLEQAP 77 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--BC---HHHH----HHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--CC---HHHH----HHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 45799999999999999999998 45678888764321 11 1233 789999999999999999999986553
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 78 ~--------------~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~ 139 (267)
T 3t9t_A 78 I--------------CLVTEFMEHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE 139 (267)
T ss_dssp C--------------EEEECCCTTCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECG
T ss_pred e--------------EEEEeCCCCCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECC
Confidence 3 9999999999999999762 246899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||.+......... ......+|+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 140 ~-------~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 199 (267)
T 3t9t_A 140 N-------QVIKVSDFGMTRFVLDDQYT---------SSTGTKFPVKWASPEVFSF----SRYSSKSDVWSFGVLMWEVF 199 (267)
T ss_dssp G-------GCEEECCTTGGGGBCCHHHH---------STTSTTCCGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEccccccccccccccc---------ccccccccccccChhhhcC----CCccchhchhhhHHHHHHHh
Confidence 7 78999999999765332111 1123357889999999876 56789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |+.||......+....+..+..+..+. ..++.+.+++.+||+.||.+|||+
T Consensus 200 ~~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps~ 252 (267)
T 3t9t_A 200 SEGKIPYENRSNSEVVEDISTGFRLYKPR---------------------------LASTHVYQIMNHCWRERPEDRPAF 252 (267)
T ss_dssp TTSCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred ccCCCCCCCCCHHHHHHHHhcCCcCCCCc---------------------------cCcHHHHHHHHHHccCChhhCcCH
Confidence 9 899999877777776665543322111 345568999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.++++++.....
T Consensus 253 ~~ll~~L~~l~~ 264 (267)
T 3t9t_A 253 SRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHh
Confidence 999999876543
No 128
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=4.7e-38 Score=374.78 Aligned_cols=254 Identities=25% Similarity=0.395 Sum_probs=208.2
Q ss_pred CCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
...+|++.+.||+|+||.||+|.+.+..||||+.+... ..+.+ .+|+.+|++++|||||++++++.+...
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~------~~~~~----~~E~~~l~~l~h~niv~~~~~~~~~~~ 260 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA------TAQAF----LAEASVMTQLRHSNLVQLLGVIVEEKG 260 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT------TSHHH----HHHHHHHHTCCCTTBCCEEEEEECTTS
T ss_pred ChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch------HHHHH----HHHHHHHHhccCCCEEEEEEEEEcCCC
Confidence 35679999999999999999999999999999864221 22334 799999999999999999999875431
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++|+|.++++.. +...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 261 -------------~~~iv~e~~~~g~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~ 324 (450)
T 1k9a_A 261 -------------GLYIVTEYMAKGSLVDYLRSR---GRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE 324 (450)
T ss_dssp -------------CEEEEEECCTTCBHHHHHHHH---CTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT
T ss_pred -------------ceEEEEEecCCCcHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECC
Confidence 359999999999999999862 3345799999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++...... ....+++.|+|||++.+ ..++.++|||||||++|||+
T Consensus 325 ~-------~~~kl~DfG~a~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~sDvwslG~~l~el~ 380 (450)
T 1k9a_A 325 D-------NVAKVSDFGLTKEASSTQ-------------DTGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEIY 380 (450)
T ss_dssp T-------SCEEECCCTTCEECC-------------------CCCTTTSCHHHHHS----SCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeeCCCcccccccc-------------cCCCCCcceeCHHHhcC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 789999999997433211 12247889999999976 56899999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |+.||.+....++...+..+..+..+. .+++.+.+|+.+||+.||.+|||+
T Consensus 381 t~g~~P~~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dp~~Rpt~ 433 (450)
T 1k9a_A 381 SFGRVPYPRIPLKDVVPRVEKGYKMDAPD---------------------------GCPPAVYDVMKNCWHLDAATRPTF 433 (450)
T ss_dssp TTTCCSSTTSCTTTHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------cCCHHHHHHHHHHcCCChhHCcCH
Confidence 8 999998877666666665554332211 456679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.++++.+.....
T Consensus 434 ~~l~~~L~~i~~ 445 (450)
T 1k9a_A 434 LQLREQLEHIRT 445 (450)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999998876543
No 129
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.6e-38 Score=370.87 Aligned_cols=282 Identities=23% Similarity=0.267 Sum_probs=206.0
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.++||+|+||.||+|++. +..||+|+..... ... .+|++++++++|||||++++++.....
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--------~~~----~~E~~il~~l~hpniv~l~~~~~~~~~ 121 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--------RFK----NRELQIMRKLDHCNIVRLRYFFYSSGE 121 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--------TSC----CHHHHHHHTCCCTTBCCEEEEEEEEET
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--------hhH----HHHHHHHHHcCCCCccceeeEEeccCC
Confidence 35999999999999999999984 6778888753221 111 479999999999999999999865321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ....+.++||||++ ++|.+.+..... ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 122 ~--------~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~ 191 (420)
T 1j1b_A 122 K--------KDEVYLNLVLDYVP-ETVYRVARHYSR-AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 191 (420)
T ss_dssp T--------TTEEEEEEEEECCC-EEHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEET
T ss_pred C--------CcceeEEeehhccc-ccHHHHHHHHhh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeC
Confidence 1 12335689999998 578777765332 2357999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+. +.+||+|||+++.+.... ......||+.|+|||++.+ ...|+.++|||||||++|||+
T Consensus 192 ~~------~~~kl~DFG~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~ell 251 (420)
T 1j1b_A 192 DT------AVLKLCDFGSAKQLVRGE-----------PNVSYICSRYYRAPELIFG---ATDYTSSIDVWSAGCVLAELL 251 (420)
T ss_dssp TT------TEEEECCCTTCEECCTTC-----------CCCSCCSCTTSCCHHHHTT---CSSCCTHHHHHHHHHHHHHHH
T ss_pred CC------CeEEeccchhhhhcccCC-----------CceeeeeCCCcCCHHHHcC---CCCCCchhhhHHHHHHHHHHH
Confidence 52 578999999997653311 1123468999999999875 246889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhcc-cccccccccCCCCCCch---hhhhhHHHHHHHHHHhcccCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGS-CHEHEVAQSGSGFEKPE---AELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~-~~~~~~~~~~~~~~~~~---~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|+.||.+.+..+....+ .....+.. ..+..... .....+.... ..+. .....++.+.+||.+||+.||.+
T Consensus 252 ~G~~pf~~~~~~~~l~~i~~~lg~p~~-~~~~~~~~~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~ 327 (420)
T 1j1b_A 252 LGQPIFPGDSGVDQLVEIIKVLGTPTR-EQIREMNPNYTEFKFPQIK---AHPWTKVFRPRTPPEAIALCSRLLEYTPTA 327 (420)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCSCCH-HHHHHHCSCCCCCCCCCCC---CCCHHHHSCTTSCHHHHHHHHHHSCSSGGG
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCH-HHHHhhChhhhhhccCccC---CCCHHHhcCCCCCHHHHHHHHHhccCChhH
Confidence 999999987766655444 32222221 11111100 0000000000 0000 01134678999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001142 1120 RPTAGDLYEMFVART 1134 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ 1134 (1142)
|||+.|+++|+|+..
T Consensus 328 R~t~~e~l~hp~f~~ 342 (420)
T 1j1b_A 328 RLTPLEACAHSFFDE 342 (420)
T ss_dssp SCCHHHHHTSGGGGG
T ss_pred CCCHHHHhCCHhhcc
Confidence 999999999999964
No 130
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=8.6e-38 Score=357.02 Aligned_cols=268 Identities=24% Similarity=0.338 Sum_probs=206.6
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHH-HhhCCCCCccceeeeEe
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM-LGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~i-L~~L~HpNIVkl~g~~~ 880 (1142)
....+|++.+.||+|+||.||+|++ .+..||+|+.... .... ....+ ..|+.+ ++.++||||+++++++.
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~-~~~~~----~~e~~~~~~~~~h~~iv~~~~~~~ 120 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT--VNSQ-EQKRL----LMDLDISMRTVDCPFTVTFYGALF 120 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--CCCH-HHHHH----HHHHHHHHTTCCCTTTCCEEEEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccc--cCcH-HHHHH----HHHHHHHHhhcCCCcEEEEeeEEE
Confidence 4467899999999999999999998 5677888875432 2222 22222 456655 67789999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSEN 959 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDLKp~N 959 (1142)
+.+. .++||||++ ++|.+++...... ...+++..+..|+.||+.||+|||++ ||+||||||+|
T Consensus 121 ~~~~--------------~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~N 184 (340)
T 3an0_A 121 REGD--------------VWICMELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 184 (340)
T ss_dssp CSSC--------------EEEEECCCS-EEHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTT
T ss_pred eCCc--------------EEEEHHHhh-CcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHH
Confidence 6553 499999998 5999998764333 35799999999999999999999987 99999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||++......... ....||+.|+|||++.+......++.++|||||||+
T Consensus 185 Il~~~~-------~~~kl~Dfg~~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 246 (340)
T 3an0_A 185 VLINAL-------GQVKMCDFGISGYLVDSVAK-----------TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGIT 246 (340)
T ss_dssp EEECST-------TCEEECCCSHHHHHSCHHHH-----------HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHH
T ss_pred EEECCC-------CCEEEeeCCCceeccccccc-----------ccCCCCccccCccccccccccCCCCchhhHHHHHHH
Confidence 999887 78999999999765432111 123589999999998653334568899999999999
Q ss_pred HHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|||++|+.||... ...+....+.....+.... ...++.+.+++.+||+.||+
T Consensus 247 l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~dp~ 300 (340)
T 3an0_A 247 MIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA--------------------------DKFSAEFVDFTSQCLKKNSK 300 (340)
T ss_dssp HHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCG--------------------------GGSCHHHHHHHHHHTCSSGG
T ss_pred HHHHHHCCCCCccccchHHHHHHHhcCCCCCCCc--------------------------ccCCHHHHHHHHHHccCCcc
Confidence 99999999999763 3333333333322222110 13466799999999999999
Q ss_pred CCCCHHHHHHHHHhhcCCCC
Q 001142 1119 ERPTAGDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ss~~ 1138 (1142)
+|||+.|+++|+|+......
T Consensus 301 ~Rps~~ell~hp~f~~~~~~ 320 (340)
T 3an0_A 301 ERPTYPELMQHPFFTLHESK 320 (340)
T ss_dssp GSCCHHHHTTSHHHHHHTTS
T ss_pred cCcCHHHHhcCcCccccccc
Confidence 99999999999999865443
No 131
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=5.9e-38 Score=359.84 Aligned_cols=260 Identities=21% Similarity=0.301 Sum_probs=196.4
Q ss_pred CCcceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC--CCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--SCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H--pNIVkl~g~~~~~~ 883 (1142)
..|++.+.||+|+||.||+|.+ .+..+|+|+.... .......+.+ .+|+.++.+++| |||+++++++.+..
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~~~~~~iv~~~~~~~~~~ 82 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSY----RNEIAYLNKLQQHSDKIIRLYDYEITDQ 82 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECT--TCCHHHHHHH----HHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecc--ccchHHHHHH----HHHHHHHHhhhhcCCceEEEeeeEeeCC
Confidence 4599999999999999999987 4566888886543 2233333444 799999999976 99999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++|||| .+++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++
T Consensus 83 --------------~~~lv~e~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~ 142 (343)
T 3dbq_A 83 --------------YIYMVMEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 142 (343)
T ss_dssp --------------EEEEEECC-CSEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred --------------EEEEEEeC-CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE
Confidence 45999995 47899999986 35689999999999999999999999999999999999996
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-------CCCCCCchhhHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWSY 1036 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~s~ksDVwSL 1036 (1142)
. +.+||+|||+++........ .......||+.|+|||++.+.. ....++.++|||||
T Consensus 143 ~--------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diwsl 206 (343)
T 3dbq_A 143 D--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206 (343)
T ss_dssp T--------TEEEECCCSSSCCC--------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHH
T ss_pred C--------CcEEEeecccccccCccccc--------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHH
Confidence 3 67999999999765432111 1122456999999999986421 12467899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHH-HHHHHHHh-CCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001142 1037 GCLLLELLTLQVPYMGLSEL-EIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1114 (1142)
Q Consensus 1037 GviL~ELLtG~~Pf~~~~~~-el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~ 1114 (1142)
||++|+|++|+.||...... .....+.. ......+ ...+..+.+|+.+||+
T Consensus 207 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~L~ 259 (343)
T 3dbq_A 207 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---------------------------DIPEKDLQDVLKCCLK 259 (343)
T ss_dssp HHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC---------------------------CCSCHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCc---------------------------ccCCHHHHHHHHHHcC
Confidence 99999999999999764322 22222211 1111000 0234568999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001142 1115 ENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1115 ~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
.||.+|||+.|+++|+|+...
T Consensus 260 ~dp~~Rpt~~e~l~hp~~~~~ 280 (343)
T 3dbq_A 260 RDPKQRISIPELLAHPYVQIQ 280 (343)
T ss_dssp SSTTTSCCHHHHHTSHHHHSC
T ss_pred CChhHCCCHHHHHhCcccccc
Confidence 999999999999999999754
No 132
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=6.6e-38 Score=354.57 Aligned_cols=251 Identities=26% Similarity=0.278 Sum_probs=194.9
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~ 883 (1142)
++|++.++||+|+||+||+|++. +..||+|+.. ...........+ ..|+..+.++ +||||+++++++.+.+
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~----~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSM--SPFRGPKDRARK----LAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEES--SSCCSHHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEec--ccccChHHHHHH----HHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 45899999999999999999984 6678888743 222233332222 4666666655 8999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+ +++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 131 --------------~~~lv~e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~ 191 (311)
T 3p1a_A 131 --------------ILYLQTELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG 191 (311)
T ss_dssp --------------EEEEEEECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC
Confidence 359999999 58999998763 34699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|||
T Consensus 192 ~~-------~~~kl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~el 248 (311)
T 3p1a_A 192 PR-------GRCKLGDFGLLVELGTAG-----------AGEVQEGDPRYMAPELLQG-----SYGTAADVFSLGLTILEV 248 (311)
T ss_dssp GG-------GCEEECCCTTCEECC-----------------CCCCCGGGCCGGGGGT-----CCSTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccceeeeecccCC-----------CCcccCCCccccCHhHhcC-----CCCchhhHHHHHHHHHHH
Confidence 87 789999999987654321 1123459999999999864 578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..|+.+. .....+..+..+ +......++.+.+++.+||+.||++|||+
T Consensus 249 ~~g~~~~~~~---~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 299 (311)
T 3p1a_A 249 ACNMELPHGG---EGWQQLRQGYLP--------------------------PEFTAGLSSELRSVLVMMLEPDPKLRATA 299 (311)
T ss_dssp HHTCCCCSSH---HHHHHHTTTCCC--------------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HhCCCCCCCc---cHHHHHhccCCC--------------------------cccccCCCHHHHHHHHHHcCCChhhCcCH
Confidence 9997766542 222333222211 11112456779999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001142 1124 GDLYEMFVART 1134 (1142)
Q Consensus 1124 ~EVL~~L~~~~ 1134 (1142)
.|+++|+|++.
T Consensus 300 ~ell~hp~~~~ 310 (311)
T 3p1a_A 300 EALLALPVLRQ 310 (311)
T ss_dssp HHHHTSGGGSC
T ss_pred HHHHhCccccC
Confidence 99999999975
No 133
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.3e-37 Score=347.87 Aligned_cols=272 Identities=24% Similarity=0.339 Sum_probs=216.1
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCC-CChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCG-SSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 880 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~-~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~ 880 (1142)
..++|++.+.||+|+||.||+|.+. +..+|+|+....... ......+.....+.+|+.+++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 3678999999999999999999984 567888886544321 122333444556689999999996 999999999997
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
... ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 95 ~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Ni 155 (298)
T 1phk_A 95 TNT--------------FFFLVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI 155 (298)
T ss_dssp CSS--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred cCC--------------eEEEEEeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceE
Confidence 654 45999999999999999976 24689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc--CCCCCCchhhHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH--KPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~~s~ksDVwSLGv 1038 (1142)
+++.+ +.+||+|||.+....... ......||+.|+|||++.+.. ....++.++||||||+
T Consensus 156 l~~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~ 217 (298)
T 1phk_A 156 LLDDD-------MNIKLTDFGFSCQLDPGE-----------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217 (298)
T ss_dssp EECTT-------CCEEECCCTTCEECCTTC-----------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHH
T ss_pred EEcCC-------CcEEEecccchhhcCCCc-----------ccccccCCccccCHHHhccccccccccCCcccccHhHHH
Confidence 99887 789999999997654321 112346899999999986321 1245789999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1039 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
++|+|++|..||...........+..+....... .....+..+.+++.+||+.||.
T Consensus 218 ~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~dp~ 273 (298)
T 1phk_A 218 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP------------------------EWDDYSDTVKDLVSRFLVVQPQ 273 (298)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT------------------------TGGGSCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcc------------------------cccccCHHHHHHHHHHccCCcc
Confidence 9999999999998877776666665443221110 0014566799999999999999
Q ss_pred CCCCHHHHHHHHHhhcCCC
Q 001142 1119 ERPTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ss~ 1137 (1142)
+|||+.|+++|+|++....
T Consensus 274 ~Rps~~~ll~h~~~~~~~~ 292 (298)
T 1phk_A 274 KRYTAEEALAHPFFQQYVV 292 (298)
T ss_dssp GSCCHHHHTTSGGGCTTC-
T ss_pred cCCCHHHHHhChHhhhccc
Confidence 9999999999999986543
No 134
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.2e-38 Score=355.34 Aligned_cols=267 Identities=20% Similarity=0.327 Sum_probs=192.1
Q ss_pred CCCCcceeeeecccCceEEEEEEECCc-----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGSA-----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~-----~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
...+|++.+.||+|+||.||+|++... .+|+|+.... .......+.+ .+|+.++++++||||+++++++
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~ 94 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD--IIASSDIEEF----LREAACMKEFDHPHVAKLVGVS 94 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHHH----HHHHHHHTTCCCTTBCCCCEEE
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccc--ccCHHHHHHH----HHHHHHHHHCCCCceehhhcee
Confidence 345799999999999999999987433 5777775322 2222333444 8999999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
...... ......++||||+++++|.+++...... ....+++..+..|+.||+.||.|||++||+||||||+
T Consensus 95 ~~~~~~--------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~ 166 (323)
T 3qup_A 95 LRSRAK--------GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAAR 166 (323)
T ss_dssp ECC---------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred eccccc--------cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcc
Confidence 864421 1123458999999999999999764321 1235899999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+ ..++.++|||||||
T Consensus 167 NIli~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~ 227 (323)
T 3qup_A 167 NCMLAED-------MTVCVADFGLSRKIYSGDYY--------RQGCASKLPVKWLALESLAD----NLYTVHSDVWAFGV 227 (323)
T ss_dssp GEEECTT-------SCEEECCCCC-------------------------CCGGGCCHHHHHH----CCCCHHHHHHHHHH
T ss_pred eEEEcCC-------CCEEEeeccccccccccccc--------cccccccCcccccCchhhcC----CCCCCccchhhHHH
Confidence 9999877 78999999999765432111 11123347889999999876 56889999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
++|+|++ |+.||.+....+....+..+..+..+ ...++.+.+++.+||+.||
T Consensus 228 il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dp 280 (323)
T 3qup_A 228 TMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP---------------------------PECMEEVYDLMYQCWSADP 280 (323)
T ss_dssp HHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHTTCSSG
T ss_pred HHHHHHhCCCCCccccChHHHHHHHhcCCCCCCC---------------------------CccCHHHHHHHHHHccCCh
Confidence 9999999 99999987777666666544432211 1445679999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 001142 1118 TERPTAGDLYEMFV 1131 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~ 1131 (1142)
.+|||+.++++.+.
T Consensus 281 ~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 281 KQRPSFTCLRMELE 294 (323)
T ss_dssp GGSCCHHHHHHHHH
T ss_pred hhCcCHHHHHHHHH
Confidence 99999555544433
No 135
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=8.1e-38 Score=366.33 Aligned_cols=285 Identities=22% Similarity=0.245 Sum_probs=204.2
Q ss_pred CCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
.+|++.++||+|+||+||+|++. ...+|+|...-+.. .. .+|+.+++.++||||+++++++......
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~--------~~----~~E~~il~~l~h~niv~l~~~~~~~~~~ 107 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR--------FK----NRELQIMRIVKHPNVVDLKAFFYSNGDK 107 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT--------SC----CHHHHHHHTCCCTTBCCEEEEEEEESSS
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc--------hH----HHHHHHHHhCCCCCcceEEEEEEecCCC
Confidence 46999999999999999999984 44566665432110 11 3799999999999999999998764321
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec-c
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID-L 964 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld-~ 964 (1142)
......++||||+++ ++...+..... ....+++..++.++.||+.||+|||++||+||||||+|||++ .
T Consensus 108 --------~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~ 177 (394)
T 4e7w_A 108 --------KDEVFLNLVLEYVPE-TVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP 177 (394)
T ss_dssp --------SSCEEEEEEEECCSE-EHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT
T ss_pred --------CCceEEEEEeeccCc-cHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCC
Confidence 123356899999984 55555543222 235799999999999999999999999999999999999998 4
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+|+...... ......||+.|+|||++.+ ...|+.++|||||||++|||+
T Consensus 178 ~-------~~~kL~DFG~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~ell 236 (394)
T 4e7w_A 178 S-------GVLKLIDFGSAKILIAGE-----------PNVSYICSRYYRAPELIFG---ATNYTTNIDIWSTGCVMAELM 236 (394)
T ss_dssp T-------TEEEECCCTTCEECCTTC-----------CCCSSCSCGGGCCHHHHTT---CSSCCTHHHHHHHHHHHHHHH
T ss_pred C-------CcEEEeeCCCcccccCCC-----------CCcccccCcCccCHHHHcC---CCCCCcHHHHHHHHHHHHHHH
Confidence 5 789999999997653321 1123468999999999865 245889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhc-ccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALG-SCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
+|+.||.+.+..+....+.. ...+... .+.... ......+.......-........++.+.+|+.+||+.||.+|||
T Consensus 237 ~g~~pf~~~~~~~~l~~i~~~~g~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 315 (394)
T 4e7w_A 237 QGQPLFPGESGIDQLVEIIKVLGTPSRE-QIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT 315 (394)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCCCCHH-HHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCC
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHH-HHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCC
Confidence 99999998877665555432 2222222 111110 00000000000000000001135678999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001142 1123 AGDLYEMFVARTS 1135 (1142)
Q Consensus 1123 a~EVL~~L~~~~s 1135 (1142)
+.|+++|+|+..-
T Consensus 316 ~~e~l~hp~f~~~ 328 (394)
T 4e7w_A 316 AIEALCHPFFDEL 328 (394)
T ss_dssp HHHHHTSGGGSTT
T ss_pred HHHHhcChhhhhh
Confidence 9999999999753
No 136
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1e-37 Score=369.88 Aligned_cols=298 Identities=18% Similarity=0.224 Sum_probs=201.6
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||.||+|.+. +..||+|+. ..........+.+ .+|+.++++++||||+++++++....
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~--~~~~~~~~~~~~~----~~E~~~l~~l~h~nIv~l~~~~~~~~ 98 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV--NRMFEDLIDCKRI----LREITILNRLKSDYIIRLYDLIIPDD 98 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEE--CSTTTSHHHHHHH----HHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEe--CchhcChHHHHHH----HHHHHHHHHcCCCCcceEEEEEecCC
Confidence 357999999999999999999985 455777764 3333333333344 89999999999999999999987643
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. .....|+||||++ ++|.++++. ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 99 ~~---------~~~~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~ 163 (432)
T 3n9x_A 99 LL---------KFDELYIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN 163 (432)
T ss_dssp TT---------TCCCEEEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred CC---------cCCeEEEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEEC
Confidence 21 1235799999996 799999864 35699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccc------------cCCCCCCCCccCCCcccchhhhccccCCCCCCchh
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA------------HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1031 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~------------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1031 (1142)
.+ +.+||+|||+|+............ ..........+||+.|+|||++.. ...|+.++
T Consensus 164 ~~-------~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~---~~~~~~~~ 233 (432)
T 3n9x_A 164 QD-------CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL---QENYTKSI 233 (432)
T ss_dssp TT-------CCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT---CSCCCTHH
T ss_pred CC-------CCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc---CCCCCccc
Confidence 87 789999999998754322110000 000011235579999999998754 25689999
Q ss_pred hHHHHHHHHHHHHhCC-----------CCCCCCC-----------------HHHHHHHH-HhCCCCCchhHHhhhccccc
Q 001142 1032 DIWSYGCLLLELLTLQ-----------VPYMGLS-----------------ELEIHDLI-QMGKRPRLTDELEALGSCHE 1082 (1142)
Q Consensus 1032 DVwSLGviL~ELLtG~-----------~Pf~~~~-----------------~~el~~~I-~~~~~p~l~~~l~~~~~~~~ 1082 (1142)
|||||||++|||++|. ++|.+.+ ..+....+ .....|... .+........
T Consensus 234 DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~-~~~~~~~~~~ 312 (432)
T 3n9x_A 234 DIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTED-DLKNINKPEV 312 (432)
T ss_dssp HHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHH-HHHTCCCHHH
T ss_pred ccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHH-HHHhccCHHH
Confidence 9999999999999854 4443322 11122222 111222111 1111000000
Q ss_pred cccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1083 HEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1083 ~~~~~~---~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
...... .............++.+.+||.+||+.||++|||++|+++|+|+..-
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 368 (432)
T 3n9x_A 313 IKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368 (432)
T ss_dssp HHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred HHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence 000000 00000001112457789999999999999999999999999999864
No 137
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.3e-38 Score=357.89 Aligned_cols=257 Identities=19% Similarity=0.322 Sum_probs=199.9
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccE----EEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADA----AAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~v----AvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
...+|++.++||+|+||+||+|++. +..+ |+|. +... ......+ .+.+|+.++++++||||++++++
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~--~~~~-~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~ 85 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREA-TSPKANK----EILDEAYVMASVDNPHVCRLLGI 85 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEE--C--------CHH----HHHHHHHHHHHCCBTTBCCEEEE
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEee--cccc-cCHHHHH----HHHHHHHHHHhCCCCCEeEEEEE
Confidence 3457999999999999999999984 3333 4443 2211 1112222 34799999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
+.+.. .++||||+++|+|.+++.. ....+++..++.|+.||+.||.|||++||+||||||+
T Consensus 86 ~~~~~---------------~~~v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~ 146 (327)
T 3poz_A 86 CLTST---------------VQLITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAAR 146 (327)
T ss_dssp EESSS---------------EEEEEECCTTCBHHHHHHH----STTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred EecCC---------------eEEEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChh
Confidence 98533 3899999999999999976 2346999999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+ ..++.++|||||||
T Consensus 147 NIll~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~ 207 (327)
T 3poz_A 147 NVLVKTP-------QHVKITDFGLAKLLGAEEKE--------YHAEGGKVPIKWMALESILH----RIYTHQSDVWSYGV 207 (327)
T ss_dssp GEEEEET-------TEEEECCTTHHHHHTTTCC---------------CCCGGGSCHHHHHH----CCCCHHHHHHHHHH
T ss_pred eEEECCC-------CCEEEccCcceeEccCCccc--------ccccCCCccccccChHHhcc----CCCCchhhhhhhHH
Confidence 9999887 78999999999765432211 11123357889999999986 57899999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1039 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1039 iL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
++|||++ |+.||.+....++...+..+.....+ ...+..+.+++.+||+.||
T Consensus 208 il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p 260 (327)
T 3poz_A 208 TVWELMTFGSKPYDGIPASEISSILEKGERLPQP---------------------------PICTIDVYMIMVKCWMIDA 260 (327)
T ss_dssp HHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC---------------------------TTBCHHHHHHHHHHTCSCG
T ss_pred HHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCC---------------------------ccCCHHHHHHHHHHcCCCh
Confidence 9999999 99999987776666666554432211 1345679999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001142 1118 TERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~ 1133 (1142)
.+|||+.|+++++...
T Consensus 261 ~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 261 DSRPKFRELIIEFSKM 276 (327)
T ss_dssp GGSCCHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHH
Confidence 9999999999998654
No 138
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=8.9e-38 Score=355.25 Aligned_cols=269 Identities=25% Similarity=0.404 Sum_probs=207.8
Q ss_pred CCCCCCCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccc
Q 001142 798 CSGLDPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVE 874 (1142)
Q Consensus 798 ~~~~~~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVk 874 (1142)
...++...+.+|++.+.||+|+||.||+|++. +..+.++++.++... .....+.+ .+|+.+++++ +||||++
T Consensus 16 ~~~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~----~~E~~~l~~l~~hp~iv~ 90 (327)
T 1fvr_A 16 PTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDF----AGELEVLCKLGHHPNIIN 90 (327)
T ss_dssp CCCSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHH----HHHHHHHTTCCCCTTBCC
T ss_pred CcccccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHHH----HHHHHHHHhccCCCchhh
Confidence 34566777889999999999999999999874 444433443333221 12223333 7899999999 8999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHh-----------ccCCCCCCHHHHHHHHHHHHHHHH
Q 001142 875 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLS-----------ETGEKHVSVKLALFIAQDVAAALV 943 (1142)
Q Consensus 875 l~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~-----------~~~~~~ls~~~i~~Ia~qIa~gL~ 943 (1142)
+++++.+.+ ..++||||+++++|.+++.... ......+++..++.++.||+.||.
T Consensus 91 ~~~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 156 (327)
T 1fvr_A 91 LLGACEHRG--------------YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 156 (327)
T ss_dssp EEEEEEETT--------------EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHH
T ss_pred hceeeeeCC--------------ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 999998655 3599999999999999997521 011246899999999999999999
Q ss_pred HHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001142 944 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1023 (1142)
Q Consensus 944 yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1023 (1142)
|||++||+||||||+|||++.+ +.+||+|||+++...... ......+++.|+|||++.+
T Consensus 157 ~LH~~~ivH~dlkp~NIl~~~~-------~~~kL~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~--- 215 (327)
T 1fvr_A 157 YLSQKQFIHRDLAARNILVGEN-------YVAKIADFGLSRGQEVYV-----------KKTMGRLPVRWMAIESLNY--- 215 (327)
T ss_dssp HHHHTTEECSCCSGGGEEECGG-------GCEEECCTTCEESSCEEC-----------CC----CCTTTCCHHHHHH---
T ss_pred HHHhCCccCCCCccceEEEcCC-------CeEEEcccCcCccccccc-----------cccCCCCCccccChhhhcc---
Confidence 9999999999999999999887 789999999986432211 1123357889999999876
Q ss_pred CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhH
Q 001142 1024 PNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1102 (1142)
Q Consensus 1024 ~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1142)
..++.++||||||+++|+|++ |..||.+....+....+..+..+..+ ...+
T Consensus 216 -~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 267 (327)
T 1fvr_A 216 -SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP---------------------------LNCD 267 (327)
T ss_dssp -CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCC---------------------------TTBC
T ss_pred -ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCC---------------------------CCCC
Confidence 467899999999999999998 99999988777766665444322111 1445
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1103 SFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1103 ~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
+.+.+++.+||+.||.+|||+.|+++++....
T Consensus 268 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 268 DEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 67999999999999999999999999987653
No 139
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.8e-38 Score=365.70 Aligned_cols=259 Identities=22% Similarity=0.363 Sum_probs=195.8
Q ss_pred CCCCcceeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
...+|++.+.||+|+||.||+|++. +..+|+|+.+.. ......+.+ .+|+.++++++||||+++++++
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~----~~E~~~l~~l~h~niv~~~~~~ 115 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG---YTEKQRRDF----LGEASIMGQFDHPNIIRLEGVV 115 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT---CCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc---cCHHHHHHH----HHHHHHHHhCCCCCCCeEEEEE
Confidence 3457999999999999999999864 445788774322 123333344 8999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.... ++||||+++++|.++++. ....+++..+..|+.||+.||+|||++||+||||||+|
T Consensus 116 ~~~~~~--------------~lv~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N 177 (373)
T 2qol_A 116 TKSKPV--------------MIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177 (373)
T ss_dssp CSSSSC--------------EEEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred eeCCce--------------EEEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcce
Confidence 865543 999999999999999975 23469999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||+++......... .......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 178 Ill~~~-------~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~SlG~i 239 (373)
T 2qol_A 178 ILINSN-------LVCKVSDFGLGRVLEDDPEAA-------YTTRGGKIPIRWTSPEAIAY----RKFTSASDVWSYGIV 239 (373)
T ss_dssp EEECTT-------CCEEECCC-----------------------------CTTSCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEECcCccccccccCCccc-------eeccCCCcCCCccChhhhcc----CCcCchhcHHHHHHH
Confidence 999887 789999999997654321110 01112235778999999976 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|||++ |+.||.+....++...+..+.....+ ...+..+.+++.+||+.||.
T Consensus 240 l~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dp~ 292 (373)
T 2qol_A 240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP---------------------------MDCPAALYQLMLDCWQKDRN 292 (373)
T ss_dssp HHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCC---------------------------TTCBHHHHHHHHHHTCSSGG
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------ccccHHHHHHHHHHhCcChh
Confidence 999998 99999988777776666543221111 14456799999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001142 1119 ERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~ 1133 (1142)
+||++.+|++.+...
T Consensus 293 ~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 293 NRPKFEQIVSILDKL 307 (373)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999987654
No 140
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3e-38 Score=370.88 Aligned_cols=262 Identities=24% Similarity=0.266 Sum_probs=194.5
Q ss_pred CCCccee-eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhh-CCCCCccceeeeEec
Q 001142 806 FPSLSSC-DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA-LRHSCIVEMYGHKIS 881 (1142)
Q Consensus 806 ~~~y~l~-~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~-L~HpNIVkl~g~~~~ 881 (1142)
+++|.+. ++||+|+||+||+|.+. +..+|+|+.... ..+ .+|+.++.+ .+||||+++++++..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~---------~~~----~~E~~~~~~~~~hp~iv~l~~~~~~ 126 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKA----RREVELHWRASQCPHIVRIVDVYEN 126 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHH----HHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc---------hhH----HHHHHHHHHhcCCCCcceEeEEEee
Confidence 5678776 78999999999999984 567888875311 122 578888754 589999999999864
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. ....+.|+||||++||+|.+++.. .+...+++..+..|+.||+.||.|||++||+||||||+|||
T Consensus 127 ~~----------~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nil 193 (400)
T 1nxk_A 127 LY----------AGRKCLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193 (400)
T ss_dssp EE----------TTEEEEEEEEECCCSEEHHHHHHC---C---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred cc----------cCCcEEEEEEEeCCCCcHHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEE
Confidence 11 012256999999999999999975 22346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++... ..+.+||+|||+++...... ......||+.|+|||++.+ ..|+.++|||||||++|
T Consensus 194 l~~~~----~~~~~kl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ 254 (400)
T 1nxk_A 194 YTSKR----PNAILKLTDFGFAKETTSHN-----------SLTTPCYTPYYVAPEVLGP----EKYDKSCDMWSLGVIMY 254 (400)
T ss_dssp ESSSS----TTCCEEECCCTTCEECC----------------------CTTCCGGGSCC----CCSSSHHHHHHHHHHHH
T ss_pred EecCC----CCccEEEEecccccccCCCC-----------ccccCCCCCCccCHhhcCC----CCCCCcccHHHHHHHHH
Confidence 98631 12789999999997543211 1124468999999999865 57889999999999999
Q ss_pred HHHhCCCCCCCCCHHH----HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1042 ELLTLQVPYMGLSELE----IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~e----l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+|++|..||.+..... ....+..+..... .+. ....++.+.+||.+||+.||
T Consensus 255 ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~-----------------------~~~-~~~~s~~~~~li~~~L~~dP 310 (400)
T 1nxk_A 255 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP-----------------------NPE-WSEVSEEVKMLIRNLLKTEP 310 (400)
T ss_dssp HHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC-----------------------TTT-TTTSCHHHHHHHHTTSCSSG
T ss_pred HHHhCCCCCCCCccccccHHHHHHHHcCcccCC-----------------------Ccc-cccCCHHHHHHHHHHCCCCh
Confidence 9999999997643221 2233322221100 000 01456779999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001142 1118 TERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~ss 1136 (1142)
.+|||+.|+++|+|+....
T Consensus 311 ~~Rpt~~eil~hp~~~~~~ 329 (400)
T 1nxk_A 311 TQRMTITEFMNHPWIMQST 329 (400)
T ss_dssp GGSCCHHHHHHSHHHHTTT
T ss_pred hHCcCHHHHhcCccccCCC
Confidence 9999999999999998654
No 141
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.9e-37 Score=358.61 Aligned_cols=289 Identities=18% Similarity=0.210 Sum_probs=210.1
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|.+. +..+|+|+.. . .......+. +.+|+.++++++||||+++++++.....
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~--~-~~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~ 99 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS--P-FEHQTYCQR----TLREIKILLRFRHENIIGINDIIRAPTI 99 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC--C-TTCHHHHHH----HHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEec--c-ccCcHHHHH----HHHHHHHHHhcCCCCCccceeEEecCCc
Confidence 47999999999999999999985 5567777643 2 112232233 4799999999999999999999875431
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. .....++||||++ ++|.++++. ..+++..+..|+.||+.||.|||++||+||||||+|||++.
T Consensus 100 ~---------~~~~~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~ 163 (364)
T 3qyz_A 100 E---------QMKDVYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 163 (364)
T ss_dssp T---------TCCCEEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred c---------ccceEEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECC
Confidence 1 2235699999997 699999875 35999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++......... ........||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 164 ~-------~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~ell 226 (364)
T 3qyz_A 164 T-------CDLKICDFGLARVADPDHDH-------TGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEML 226 (364)
T ss_dssp T-------CCEEECCCTTCEECCGGGCB-------CCTTCCCCSCGGGCCHHHHHT---BCSCSTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEeCcceEecCCCCCc-------cccccccccccCCCCCHHhcC---CCCCCcchhHHHHHHHHHHHH
Confidence 7 78999999999765432211 011224579999999998765 245789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccc-ccc--CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEV-AQS--GSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||.+....+....+...........+........... ... .............++.+.+||.+||+.||.+||
T Consensus 227 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 306 (364)
T 3qyz_A 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306 (364)
T ss_dssp HSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred HCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCC
Confidence 99999988776665555532221111111111000000000 000 000000111124567799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++|+|+...
T Consensus 307 t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 307 EVEQALAHPYLEQY 320 (364)
T ss_dssp CHHHHHTSGGGTTT
T ss_pred CHHHHhcCcchhhc
Confidence 99999999999864
No 142
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=348.26 Aligned_cols=300 Identities=21% Similarity=0.238 Sum_probs=206.4
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|.+. +..+|+|+.... .....+.+ .+|+.++++++||||+++++++.....
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~~ 82 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKHA----LREIKIIRRLDHDNIVKVFEILGPSGS 82 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHHHH----HHHHHHHHTCCCTTBCCEEEEECTTSC
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHHHH----HHHHHHHHhcCCCCeeEEEEecccccc
Confidence 57999999999999999999985 667888875432 23333444 799999999999999999999865321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
....+..........++||||++ ++|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 83 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~ 155 (320)
T 2i6l_A 83 QLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT 155 (320)
T ss_dssp BCCC----CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET
T ss_pred ccccccccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence 10000001122346799999998 699998853 46899999999999999999999999999999999999974
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
++ +.+||+|||++......... ........+|+.|+|||++.+ ...++.++||||||+++|+|+
T Consensus 156 ~~------~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~el~ 219 (320)
T 2i6l_A 156 ED------LVLKIGDFGLARIMDPHYSH-------KGHLSEGLVTKWYRSPRLLLS---PNNYTKAIDMWAAGCIFAEML 219 (320)
T ss_dssp TT------TEEEECCCTTCBCC---------------CCCGGGSCCTTCCHHHHHC---TTCCCHHHHHHHHHHHHHHHH
T ss_pred CC------CeEEEccCccccccCCCccc-------ccccccccccccccCcHHhcC---cccCCchhhhHhHHHHHHHHH
Confidence 32 68999999999765432110 011223457999999999864 246889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCC-C-CCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGS-G-FEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
+|+.||.+....+....+............................ . ..........+..+.+++.+||+.||.+|||
T Consensus 220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 299 (320)
T 2i6l_A 220 TGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT 299 (320)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC
Confidence 9999999887776666554433222211111110000000000000 0 0000111245778999999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001142 1123 AGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1123 a~EVL~~L~~~~ss~ 1137 (1142)
+.|+++|+|+...+.
T Consensus 300 ~~ell~hp~~~~~~~ 314 (320)
T 2i6l_A 300 AEEALSHPYMSIYSF 314 (320)
T ss_dssp HHHHHTSHHHHTTCC
T ss_pred HHHHhCCcccccccC
Confidence 999999999986543
No 143
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=351.42 Aligned_cols=260 Identities=25% Similarity=0.381 Sum_probs=204.2
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
...++|++.+.||+|+||.||+|.+. +..+|+|+..... ..+.+ .+|+.++++++||||+++++++..
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~ 95 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQEI----IKEISIMQQCDSPHVVKYYGSYFK 95 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHHH----HHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHHH----HHHHHHHHhCCCCCCccEEEEEEe
Confidence 34567999999999999999999985 6778888765321 11233 789999999999999999999886
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. ..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+
T Consensus 96 ~~--------------~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil 157 (314)
T 3com_A 96 NT--------------DLWIVMEYCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNIL 157 (314)
T ss_dssp TT--------------EEEEEEECCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred CC--------------EEEEEeecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEE
Confidence 54 359999999999999999741 346899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||.+........ ......||+.|+|||++.+ ..++.++||||||+++|
T Consensus 158 ~~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~ 216 (314)
T 3com_A 158 LNTE-------GHAKLADFGVAGQLTDTMA----------KRNTVIGTPFWMAPEVIQE----IGYNCVADIWSLGITAI 216 (314)
T ss_dssp ECTT-------CCEEECCCTTCEECBTTBS----------CBCCCCSCGGGCCHHHHSS----SCBCTTHHHHHHHHHHH
T ss_pred ECCC-------CCEEEeecccchhhhhhcc----------ccCccCCCCCccChhhcCC----CCCCccccHHHHHHHHH
Confidence 9877 7899999999976543211 1123468999999999876 46789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|++|+.||...........+.....+.... ....++.+.+++.+||+.||.+||
T Consensus 217 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rp 271 (314)
T 3com_A 217 EMAEGKPPYADIHPMRAIFMIPTNPPPTFRK-------------------------PELWSDNFTDFVKQCLVKSPEQRA 271 (314)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSS-------------------------GGGSCHHHHHHHHHHTCSCTTTSC
T ss_pred HHHhCCCCCCCCChHHHHHHHhcCCCcccCC-------------------------cccCCHHHHHHHHHHccCChhhCc
Confidence 9999999998776665544443333222110 113456799999999999999999
Q ss_pred CHHHHHHHHHhhcCCC
Q 001142 1122 TAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ss~ 1137 (1142)
|+.++++|+|+.....
T Consensus 272 t~~~ll~~~~~~~~~~ 287 (314)
T 3com_A 272 TATQLLQHPFVRSAKG 287 (314)
T ss_dssp CHHHHTTSHHHHTCCC
T ss_pred CHHHHHhCHHHhcCCc
Confidence 9999999999986643
No 144
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=8.2e-38 Score=351.46 Aligned_cols=270 Identities=25% Similarity=0.343 Sum_probs=205.1
Q ss_pred cceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
|...+.||+|+||.||+|.+.+..+|+|+.............+. +.+|+.++++++||||+++++++.+.+..
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~~~--- 105 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQ----FDQEIKVMAKCQHENLVELLGFSSDGDDL--- 105 (307)
T ss_dssp TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHH----HHHHHHHHHHCCCTTBCCEEEEECSSSSC---
T ss_pred cccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHH----HHHHHHHHHhcCCCCeEEEEEEEecCCce---
Confidence 56679999999999999999999999998653322222222333 48999999999999999999999865543
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
++||||+++++|.+++.... ....+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 106 -----------~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~--- 169 (307)
T 2nru_A 106 -----------CLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA--- 169 (307)
T ss_dssp -----------EEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---
T ss_pred -----------EEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC---
Confidence 99999999999999997532 23468999999999999999999999999999999999999877
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1048 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~ 1048 (1142)
+.+||+|||++......... .......||+.|+|||++.+ .++.++||||||+++|+|++|..
T Consensus 170 ----~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-----~~~~~~Dv~slG~il~~l~~g~~ 232 (307)
T 2nru_A 170 ----FTAKISDFGLARASEKFAQT--------VMTSRIVGTTAYMAPEALRG-----EITPKSDIYSFGVVLLEIITGLP 232 (307)
T ss_dssp ----CCEEECCCTTCEECCSCSSC--------EECSSCCSCGGGCCHHHHTT-----EECTHHHHHHHHHHHHHHHHCCC
T ss_pred ----CcEEEeeccccccccccccc--------ccccccCCCcCcCChHHhcC-----CCCccchhHHHHHHHHHHHHCCC
Confidence 78999999999765432111 01123468999999999864 46799999999999999999999
Q ss_pred CCCCCCHHH----HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1049 PYMGLSELE----IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1049 Pf~~~~~~e----l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
||......+ +...+... ...+.... ... ........++.+.+++.+||+.||.+|||+.
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~------------~~~----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 295 (307)
T 2nru_A 233 AVDEHREPQLLLDIKEEIEDE-EKTIEDYI------------DKK----MNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295 (307)
T ss_dssp SBCTTBSSSBTTHHHHHHHTT-SCCHHHHS------------CSS----CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CcccCcchHHHHHHHHHhhhh-hhhhhhhc------------ccc----ccccchHHHHHHHHHHHHHcCCCcccCcCHH
Confidence 997643322 12222111 11111100 000 0111235677899999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001142 1125 DLYEMFVARTS 1135 (1142)
Q Consensus 1125 EVL~~L~~~~s 1135 (1142)
++++++.....
T Consensus 296 ~l~~~L~~l~~ 306 (307)
T 2nru_A 296 KVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhc
Confidence 99999987654
No 145
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.6e-38 Score=365.06 Aligned_cols=264 Identities=22% Similarity=0.270 Sum_probs=203.9
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 876 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~-----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~ 876 (1142)
...+.+|++.+.||+|+||.||+|++ .+..+|+|+.+...........+.+ .+|+.+++++ +||||++++
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~----~~E~~~l~~l~~h~~iv~~~ 125 (355)
T 1vzo_A 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHT----RTERQVLEHIRQSPFLVTLH 125 (355)
T ss_dssp CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGC----CCHHHHHHHHHTCTTBCCEE
T ss_pred cccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHH----HHHHHHHHHccCCCceeEEE
Confidence 44567899999999999999999998 5678999986432111111112223 5799999999 699999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001142 877 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 956 (1142)
Q Consensus 877 g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLK 956 (1142)
+++.... ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+|||||
T Consensus 126 ~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlk 186 (355)
T 1vzo_A 126 YAFQTET--------------KLHLILDYINGGELFTHLSQ-----RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIK 186 (355)
T ss_dssp EEEEETT--------------EEEEEECCCCSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred EEEeeCc--------------eEEEEeecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 9998654 34999999999999999976 2468999999999999999999999999999999
Q ss_pred CCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001142 957 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1036 (1142)
Q Consensus 957 p~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSL 1036 (1142)
|+|||++.+ +.+||+|||+++........ ......||+.|+|||++.+. ...++.++|||||
T Consensus 187 p~NIll~~~-------~~~kl~DfG~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~--~~~~~~~~Dvwsl 248 (355)
T 1vzo_A 187 LENILLDSN-------GHVVLTDFGLSKEFVADETE---------RAYDFCGTIEYMAPDIVRGG--DSGHDKAVDWWSL 248 (355)
T ss_dssp GGGEEECTT-------SCEEESCSSEEEECCGGGGG---------GGCGGGSCCTTCCHHHHTTC--C---CTHHHHHHH
T ss_pred HHHEEECCC-------CcEEEeeCCCCeecccCCCC---------cccCcccCcCccChhhhcCC--CCCCCchhhHHHH
Confidence 999999887 78999999999765332111 11234699999999998752 2357899999999
Q ss_pred HHHHHHHHhCCCCCCCCC----HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1037 GCLLLELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1037 GviL~ELLtG~~Pf~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
||++|||++|+.||.... ...+...+.....+ .+ ...+..+.+||.+|
T Consensus 249 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~ 300 (355)
T 1vzo_A 249 GVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-YP---------------------------QEMSALAKDLIQRL 300 (355)
T ss_dssp HHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC-CC---------------------------cccCHHHHHHHHHH
Confidence 999999999999997432 22333333222111 10 14456689999999
Q ss_pred cccCCCCCC-----CHHHHHHHHHhhcC
Q 001142 1113 TEENPTERP-----TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1113 L~~DP~~RP-----Sa~EVL~~L~~~~s 1135 (1142)
|+.||.+|| +++|+++|+|+...
T Consensus 301 L~~dP~~R~~~~~~s~~ell~h~~f~~~ 328 (355)
T 1vzo_A 301 LMKDPKKRLGCGPRDADEIKEHLFFQKI 328 (355)
T ss_dssp TCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred hhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence 999999999 99999999999753
No 146
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=5.2e-38 Score=364.77 Aligned_cols=285 Identities=20% Similarity=0.233 Sum_probs=193.7
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|.+. +..||+|+ +..........+.+ .+|+.++++++||||+++++++.....
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~--~~~~~~~~~~~~~~----~~E~~~l~~l~hpnIv~~~~~~~~~~~ 102 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKRT----YRELRLLKHMKHENVIGLLDVFTPARS 102 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEE--CSSTTSSHHHHHHH----HHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEE--eCccccCHHHHHHH----HHHHHHHHhCCCCCCCcEEEEEecCCc
Confidence 67999999999999999999874 55677776 33322233333333 799999999999999999999875432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ......++||||+ +++|.++++. ..+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 103 ~--------~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~ 167 (367)
T 2fst_X 103 L--------EEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 167 (367)
T ss_dssp G--------GGCCCCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred c--------ccCCeEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECC
Confidence 1 1123459999999 6899998864 46999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++..... .....||+.|+|||++.+ ...++.++|||||||++|||+
T Consensus 168 ~-------~~~kL~DFG~a~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~ell 224 (367)
T 2fst_X 168 D-------CELKILDFGLARHTADE-------------MTGYVATRWYRAPEIMLN---WMHYNQTVDIWSVGCIMAELL 224 (367)
T ss_dssp T-------CCEEECC----------------------------CCCTTCCHHHHTT---CCSCCTTHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeecccccccccc-------------CCCcCcCcCccChHHHcC---CcCCCchhhHHHHHHHHHHHH
Confidence 7 78999999999754321 123468999999999875 246889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCC---CCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGS---GFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||.+.+..+....+...........+..........+.+... ...........++.+.+||.+||+.||.+||
T Consensus 225 ~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~ 304 (367)
T 2fst_X 225 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 304 (367)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCc
Confidence 9999999888776666553322111111111110000000000000 0000111124467799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++|+|+..-
T Consensus 305 t~~e~L~hp~~~~~ 318 (367)
T 2fst_X 305 TAAQALAHAYFAQY 318 (367)
T ss_dssp CHHHHHTSGGGTTT
T ss_pred CHHHHhcChhhhhc
Confidence 99999999999753
No 147
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=5.9e-38 Score=382.65 Aligned_cols=260 Identities=23% Similarity=0.321 Sum_probs=208.1
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+....+|++.++||+|+||.||+|++ .+..+|+|+...... ........+.+|+.++++++|||||++++++.
T Consensus 180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~-----~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~ 254 (576)
T 2acx_A 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-----KKRKGEAMALNEKQILEKVNSRFVVSLAYAYE 254 (576)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh-----hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe
Confidence 34567899999999999999999998 467788888643211 11111233478999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.+ ..|+||||++||+|.+++.. .+...+++..++.++.||+.||+|||++||+||||||+||
T Consensus 255 ~~~--------------~l~lVmEy~~gg~L~~~l~~---~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNI 317 (576)
T 2acx_A 255 TKD--------------ALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENI 317 (576)
T ss_dssp CSS--------------EEEEEECCCCSCBHHHHHHS---SSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred eCC--------------EEEEEEEcCCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheE
Confidence 655 45999999999999999875 2334599999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||+++....... .....||+.|+|||++.+ ..|+.++|||||||++
T Consensus 318 Lld~~-------g~vKL~DFGla~~~~~~~~-----------~~~~~GT~~Y~APEvl~~----~~~~~~~DiwSLGvil 375 (576)
T 2acx_A 318 LLDDH-------GHIRISDLGLAVHVPEGQT-----------IKGRVGTVGYMAPEVVKN----ERYTFSPDWWALGCLL 375 (576)
T ss_dssp EECTT-------SCEEECCCTTCEECCTTCC-----------EECCCSCGGGCCHHHHTT----CEESSHHHHHHHHHHH
T ss_pred EEeCC-------CCeEEEecccceecccCcc-----------ccccCCCccccCHHHHcC----CCCCccchHHHHHHHH
Confidence 99887 7899999999976543211 113469999999999976 5688999999999999
Q ss_pred HHHHhCCCCCCCCC----HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1041 LELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
|||++|+.||.+.. ..++...+..... .++ ...++.+.+||.+||+.|
T Consensus 376 yeLltG~~PF~~~~~~~~~~~i~~~i~~~~~-~~p---------------------------~~~s~~~~dLI~~lL~~d 427 (576)
T 2acx_A 376 YEMIAGQSPFQQRKKKIKREEVERLVKEVPE-EYS---------------------------ERFSPQARSLCSQLLCKD 427 (576)
T ss_dssp HHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHHHHHTCSS
T ss_pred HHHHhCCCCCcccccchhHHHHHHHhhcccc-cCC---------------------------ccCCHHHHHHHHHhccCC
Confidence 99999999998643 2334444432211 110 145567999999999999
Q ss_pred CCCCC-----CHHHHHHHHHhhc
Q 001142 1117 PTERP-----TAGDLYEMFVART 1134 (1142)
Q Consensus 1117 P~~RP-----Sa~EVL~~L~~~~ 1134 (1142)
|.+|| +++||++|+|++.
T Consensus 428 P~~R~g~~~~sa~eil~HpfF~~ 450 (576)
T 2acx_A 428 PAERLGCRGGSAREVKEHPLFKK 450 (576)
T ss_dssp GGGSTTCSSSHHHHHHTSGGGTT
T ss_pred HHHcCCCCCCCHHHHHhChhhcc
Confidence 99999 8999999999985
No 148
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1e-37 Score=369.70 Aligned_cols=283 Identities=21% Similarity=0.234 Sum_probs=203.1
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC------CCCCccceeee
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL------RHSCIVEMYGH 878 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L------~HpNIVkl~g~ 878 (1142)
.+|++.++||+|+||+||+|.+. +..||+|+.... ....+. +.+|+.+++.+ .|+||++++++
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-----~~~~~~----~~~E~~~l~~l~~~~~~~~~~iv~~~~~ 167 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-----KRFHRQ----AAEEIRILEHLRKQDKDNTMNVIHMLEN 167 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-----HHHHHH----HHHHHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-----cchHHH----HHHHHHHHHHHhhccccCCcCEEEEEee
Confidence 46999999999999999999984 567788875321 222222 36788877776 57899999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
+.... +.++||||+. ++|.+++.. .....+++..++.|+.||+.||+|||++||+||||||+
T Consensus 168 ~~~~~--------------~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~ 229 (429)
T 3kvw_A 168 FTFRN--------------HICMTFELLS-MNLYELIKK---NKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPE 229 (429)
T ss_dssp EEETT--------------EEEEEECCCC-CBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGG
T ss_pred cccCC--------------eEEEEEeccC-CCHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHH
Confidence 98654 4599999996 799999986 23345899999999999999999999999999999999
Q ss_pred CeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 959 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 959 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
|||++.++. ..+||+|||++...... .....||+.|+|||++.+ ..++.++|||||||
T Consensus 230 NILl~~~~~-----~~vkL~DFG~a~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~ 287 (429)
T 3kvw_A 230 NILLKQQGR-----SGIKVIDFGSSCYEHQR-------------VYTYIQSRFYRAPEVILG----ARYGMPIDMWSLGC 287 (429)
T ss_dssp GEEESSTTS-----CCEEECCCTTCEETTCC-------------CCSSCSCGGGCCHHHHHT----BCCCTHHHHHHHHH
T ss_pred HeEEccCCC-----cceEEeecccceecCCc-------------ccccCCCCCccChHHHhC----CCCCchHHHHhHHH
Confidence 999987621 33999999999653321 123468999999999986 56899999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccc---cc-cccc--------------------cc---CCC
Q 001142 1039 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---HE-HEVA--------------------QS---GSG 1091 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---~~-~~~~--------------------~~---~~~ 1091 (1142)
++|||++|..||.+.+..+....+...........+...... .. .... .. ...
T Consensus 288 il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (429)
T 3kvw_A 288 ILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGP 367 (429)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECS
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccCC
Confidence 999999999999988877766555332211111111100000 00 0000 00 000
Q ss_pred CCCch----hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCCC
Q 001142 1092 FEKPE----AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1092 ~~~~~----~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ss~~ 1138 (1142)
..... .....++.+.+||.+||+.||++|||+.|+++|+|++...+.
T Consensus 368 ~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~~~ 418 (429)
T 3kvw_A 368 PESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRLPK 418 (429)
T ss_dssp TTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC-----
T ss_pred ccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCCCC
Confidence 00000 001235679999999999999999999999999999876443
No 149
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.8e-38 Score=353.81 Aligned_cols=269 Identities=24% Similarity=0.372 Sum_probs=204.4
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 881 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~ 881 (1142)
...+|++.+.||+|+||.||+|++ .+..+|+|+..... . ..+.+ .+|+.+++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~---~~~~~----~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--D---EEEEI----KQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--S---TTHHH----HHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--c---cHHHH----HHHHHHHHhccCCCCeeeeeeEEee
Confidence 356799999999999999999998 56778888865331 1 12233 7899999999 79999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.... ......++||||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 93 ~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl 161 (326)
T 2x7f_A 93 KNPP--------GMDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161 (326)
T ss_dssp CC----------CCCCEEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEE
T ss_pred ccCc--------cccceEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEE
Confidence 4310 1123579999999999999999862 2246899999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL 1040 (1142)
++.+ +.+||+|||++........ ......||+.|+|||++.... ....++.++|||||||++
T Consensus 162 ~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il 224 (326)
T 2x7f_A 162 LTEN-------AEVKLVDFGVSAQLDRTVG----------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITA 224 (326)
T ss_dssp ECTT-------CCEEECCCTTTC-----------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHH
T ss_pred EcCC-------CCEEEeeCcCceecCcCcc----------ccccccCCccccChhhhccccccCcCCCccchHHHHHHHH
Confidence 9877 7899999999876533111 112346899999999986321 124678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|..||.+.........+.....+... ....++.+.++|.+||..||.+|
T Consensus 225 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~dp~~R 278 (326)
T 2x7f_A 225 IEMAEGAPPLCDMHPMRALFLIPRNPAPRLK--------------------------SKKWSKKFQSFIESCLVKNHSQR 278 (326)
T ss_dssp HHHHHSSCTTTTSCHHHHHHHHHHSCCCCCS--------------------------CSCSCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHhCCCCCCCCcHHHHHHHhhcCccccCC--------------------------ccccCHHHHHHHHHHhccChhhC
Confidence 9999999999887766655544433322211 01345679999999999999999
Q ss_pred CCHHHHHHHHHhhcCC
Q 001142 1121 PTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ss 1136 (1142)
||+.++++|+|++...
T Consensus 279 ps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 279 PATEQLMKHPFIRDQP 294 (326)
T ss_dssp CCHHHHHTSHHHHCCT
T ss_pred CCHHHHhhChHHhhCc
Confidence 9999999999998643
No 150
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.8e-37 Score=349.46 Aligned_cols=262 Identities=21% Similarity=0.323 Sum_probs=208.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
..+|++.+.||+|+||.||+|.+. +..+|+|+.. .. ........ +.+|+.++++++||||++++++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~--~~-~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~ 96 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EA-ASMRERIE----FLNEASVMKEFNCHHVVRLLGV 96 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECC--TT-SCHHHHHH----HHHHHHHGGGCCCTTBCCEEEE
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecc--cc-cCHHHHHH----HHHHHHHHHhcCCCCEeeeEEE
Confidence 457999999999999999999864 3557777643 21 12233333 3799999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----CCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----GEKHVSVKLALFIAQDVAAALVELHSKHIMHR 953 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHr 953 (1142)
+.+.+.. ++||||+++++|.+++...... ....+++..+..++.||+.||.|||++||+||
T Consensus 97 ~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~ 162 (322)
T 1p4o_A 97 VSQGQPT--------------LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHR 162 (322)
T ss_dssp ECSSSSC--------------EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCS
T ss_pred EccCCcc--------------EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccC
Confidence 9765543 9999999999999999764321 12457999999999999999999999999999
Q ss_pred CCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001142 954 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1033 (1142)
Q Consensus 954 DLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1033 (1142)
||||+|||++.+ +.+||+|||++.......... ......+|+.|+|||++.+ ..++.++||
T Consensus 163 dikp~NIli~~~-------~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di 223 (322)
T 1p4o_A 163 DLAARNCMVAED-------FTVKIGDFGMTRDIYETDYYR--------KGGKGLLPVRWMSPESLKD----GVFTTYSDV 223 (322)
T ss_dssp CCSGGGEEECTT-------CCEEECCTTCCCGGGGGGCEE--------GGGSSEECGGGCCHHHHHH----CCCCHHHHH
T ss_pred CCccceEEEcCC-------CeEEECcCccccccccccccc--------cccCCCCCCCccChhhhcc----CCCCchhhH
Confidence 999999999887 789999999997654322110 1113357889999999876 568899999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1034 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1034 wSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
||||+++|+|++ |..||.+....+....+..+..+..+ ...++.+.+++.+|
T Consensus 224 ~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~ 276 (322)
T 1p4o_A 224 WSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP---------------------------DNCPDMLFELMRMC 276 (322)
T ss_dssp HHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHH
Confidence 999999999999 89999988777777666554432211 14456799999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhc
Q 001142 1113 TEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1113 L~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
|+.||.+|||+.|+++++....
T Consensus 277 l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 277 WQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp TCSSGGGSCCHHHHHHHHGGGS
T ss_pred cCCCcccCcCHHHHHHHHHHhh
Confidence 9999999999999999987653
No 151
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.9e-38 Score=372.31 Aligned_cols=256 Identities=22% Similarity=0.372 Sum_probs=208.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.++|++.++||+|+||.||+|.+. +..||+|+.+.. . ...+.+ .+|+.+|++++|||||++++++.. .
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~--~---~~~~~~----~~E~~~l~~l~h~~iv~l~~~~~~-~- 255 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--S---MSVEAF----LAEANVMKTLQHDKLVKLHAVVTK-E- 255 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT--S---BCHHHH----HHHHHHHTTCCCTTBCCEEEEECS-S-
T ss_pred hHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC--C---ccHHHH----HHHHHHHhhCCCCCEeeEEEEEeC-C-
Confidence 457899999999999999999985 567888875422 1 123344 799999999999999999999863 2
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++|+|.++++... ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 256 -------------~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~ 319 (454)
T 1qcf_A 256 -------------PIYIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 319 (454)
T ss_dssp -------------SCEEEECCCTTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECT
T ss_pred -------------ccEEEEeecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECC
Confidence 2399999999999999997421 135889999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++........ ......+|+.|+|||++.. ..++.++|||||||++|||+
T Consensus 320 ~-------~~~kl~DFG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~el~ 379 (454)
T 1qcf_A 320 S-------LVCKIADFGLARVIEDNEYT---------AREGAKFPIKWTAPEAINF----GSFTIKSDVWSFGILLMEIV 379 (454)
T ss_dssp T-------CCEEECSTTGGGGBCCHHHH---------TTCSSSSCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CcEEEeeCCCceEcCCCcee---------ccCCCcccccccCHHHhcc----CCCCcHHHHHhHHHHHHHHH
Confidence 7 78999999999765432111 1112346788999999976 56889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |+.||.+....++...+..+.....+ ..+++.+.+|+.+||+.||++|||+
T Consensus 380 t~g~~P~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dp~~RPt~ 432 (454)
T 1qcf_A 380 TYGRIPYPGMSNPEVIRALERGYRMPRP---------------------------ENCPEELYNIMMRCWKNRPEERPTF 432 (454)
T ss_dssp TTSCCSSTTCCHHHHHHHHHHTCCCCCC---------------------------TTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHccCChhHCcCH
Confidence 9 99999988888877777655433221 1456679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.+|++.+.....
T Consensus 433 ~~i~~~L~~~~~ 444 (454)
T 1qcf_A 433 EYIQSVLDDFYT 444 (454)
T ss_dssp HHHHHHHHTSSS
T ss_pred HHHHHHHHHHHh
Confidence 999999887644
No 152
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=5.2e-38 Score=392.30 Aligned_cols=260 Identities=23% Similarity=0.288 Sum_probs=211.3
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 879 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~ 879 (1142)
...+.+|++.++||+|+||.||+|++. +..+|+|+.+.... ........+..|..++..+ +||||+++++++
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-----~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~ 411 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCF 411 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-----HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-----ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE
Confidence 345788999999999999999999984 45688888653211 0111122346899999988 699999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.+ .+||||||++||+|.++++.. ..+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 412 ~~~~--------------~~~lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~N 472 (674)
T 3pfq_A 412 QTMD--------------RLYFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN 472 (674)
T ss_dssp BCSS--------------EEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTT
T ss_pred EeCC--------------EEEEEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhh
Confidence 8655 459999999999999999862 469999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||+|+...... .......||+.|+|||++.+ ..|+.++|||||||+
T Consensus 473 ILl~~~-------g~ikL~DFGla~~~~~~~----------~~~~~~~GT~~Y~APE~l~~----~~~~~~~DvwSlGvi 531 (674)
T 3pfq_A 473 VMLDSE-------GHIKIADFGMCKENIWDG----------VTTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVL 531 (674)
T ss_dssp EEECSS-------SCEEECCCTTCEECCCTT----------CCBCCCCSCSSSCCHHHHTC----CCBSTHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEeecceeeccccCC----------cccccccCCCcccCHhhhcC----CCCCccceEechHHH
Confidence 999987 889999999997532211 11234579999999999976 578999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|||++|+.||.+.+..++...|...... ++ ...++++.+||.+||+.||.+
T Consensus 532 lyelltG~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~dP~~ 583 (674)
T 3pfq_A 532 LYEMLAGQAPFEGEDEDELFQSIMEHNVA-YP---------------------------KSMSKEAVAICKGLMTKHPGK 583 (674)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHSSCCC-CC---------------------------TTSCHHHHHHHHHHSCSSSTT
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------ccCCHHHHHHHHHHccCCHHH
Confidence 99999999999998888888877654321 11 144567999999999999999
Q ss_pred CCCH-----HHHHHHHHhhcC
Q 001142 1120 RPTA-----GDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa-----~EVL~~L~~~~s 1135 (1142)
||++ +||++|+||+.-
T Consensus 584 R~~~~~~~~~ei~~h~ff~~i 604 (674)
T 3pfq_A 584 RLGCGPEGERDIKEHAFFRYI 604 (674)
T ss_dssp CTTCSTTHHHHHHSSGGGSSC
T ss_pred CCCCCCCcHHHHhcCccccCC
Confidence 9997 999999999753
No 153
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.4e-37 Score=345.50 Aligned_cols=256 Identities=21% Similarity=0.342 Sum_probs=200.8
Q ss_pred CCCCcceeeeecccCceEEEEEEECC---c--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGS---A--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~---~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
...+|++.+.||+|+||.||+|.+.. . .+|+|+. ... ......+.+ .+|+.++++++||||+++++++
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~--~~~-~~~~~~~~~----~~E~~~l~~l~h~~i~~~~~~~ 82 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKD-CTLDNKEKF----MSEAVIMKNLDHPHIVKLIGII 82 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEEC--CTT-SCHHHHHHH----HHHHHHHHHHCCTTBCCEEEEE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEec--ccc-cCchHHHHH----HHHHHHHHhCCCCCcceEEEEE
Confidence 45679999999999999999998732 2 2666653 322 122333334 8999999999999999999997
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.+.. .++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 83 ~~~~---------------~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N 143 (281)
T 3cc6_A 83 EEEP---------------TWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRN 143 (281)
T ss_dssp CSSS---------------CEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred cCCC---------------CEEEEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccce
Confidence 6432 28999999999999999762 2458999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
|+++.+ +.+||+|||.+......... ......+|+.|+|||++.+ ..++.++||||||++
T Consensus 144 il~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 203 (281)
T 3cc6_A 144 ILVASP-------ECVKLGDFGLSRYIEDEDYY---------KASVTRLPIKWMSPESINF----RRFTTASDVWMFAVC 203 (281)
T ss_dssp EEEEET-------TEEEECCCCGGGCC------------------CCCCCGGGCCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEECCC-------CcEEeCccCCCccccccccc---------ccccCCCCcceeCchhhcc----CCCCchhccHHHHHH
Confidence 999887 78999999999765432111 1123357889999999875 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|+|++ |+.||......+....+..+..+..+. ..++.+.+++.+||+.||.
T Consensus 204 l~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~ 256 (281)
T 3cc6_A 204 MWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD---------------------------LCPPVLYTLMTRCWDYDPS 256 (281)
T ss_dssp HHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHHccCCch
Confidence 999998 999998766666555554443322111 3456699999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001142 1119 ERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~ 1133 (1142)
+|||+.|+++++...
T Consensus 257 ~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 257 DRPRFTELVCSLSDV 271 (281)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999998654
No 154
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6e-38 Score=349.10 Aligned_cols=263 Identities=21% Similarity=0.331 Sum_probs=197.4
Q ss_pred CCCCcceeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccce
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 875 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~---------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl 875 (1142)
..++|++.+.||+|+||+||+|.+.. ..+|+|+.... ..... ..+.+|+.++++++||||+++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~----~~~~~----~~~~~E~~~l~~l~h~~iv~~ 77 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA----HRNYS----ESFFEAASMMSKLSHKHLVLN 77 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG----GGGGH----HHHHHHHHHHHTSCCTTBCCE
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc----cHHHH----HHHHHHHHHHHhCCCCCEeEE
Confidence 34679999999999999999998743 34777775322 11222 234899999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 955 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDL 955 (1142)
++++.+.+.. ++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||
T Consensus 78 ~~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dl 139 (289)
T 4fvq_A 78 YGVCVCGDEN--------------ILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLEENTLIHGNV 139 (289)
T ss_dssp EEEECCTTCC--------------EEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred EEEEEeCCCC--------------EEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCc
Confidence 9999875533 8999999999999999862 234899999999999999999999999999999
Q ss_pred CCCCeeecccccc-CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHH
Q 001142 956 KSENILIDLERKK-ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIW 1034 (1142)
Q Consensus 956 Kp~NILld~~~~~-~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVw 1034 (1142)
||+|||++.+... ....+.+||+|||.+...... ....||+.|+|||++.+ ...++.++|||
T Consensus 140 kp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------------~~~~~~~~y~aPE~~~~---~~~~~~~~Diw 202 (289)
T 4fvq_A 140 CAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK--------------DILQERIPWVPPECIEN---PKNLNLATDKW 202 (289)
T ss_dssp CGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH--------------HHHHHTTTTSCHHHHHC---GGGCCHHHHHH
T ss_pred CcceEEEecCCcccccccceeeeccCcccccccCc--------------cccCCcCcccCHHHhCC---CCCCCchhHHH
Confidence 9999999877310 111233999999998654321 12347888999999875 24578999999
Q ss_pred HHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1035 SYGCLLLELLTL-QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1035 SLGviL~ELLtG-~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
|||+++|+|++| .+||................. .+. ..++.+.+++.+||
T Consensus 203 slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~---------------------------~~~~~l~~li~~~l 253 (289)
T 4fvq_A 203 SFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQ--LPA---------------------------PKAAELANLINNCM 253 (289)
T ss_dssp HHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--CCC---------------------------CSSCTTHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCccccchHHHHHHhhccCC--CCC---------------------------CCCHHHHHHHHHHc
Confidence 999999999995 555555444433333222111 000 12334889999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhcCCCCC
Q 001142 1114 EENPTERPTAGDLYEMFVARTSSSIS 1139 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~~~ss~~s 1139 (1142)
+.||.+|||+.|+++++....++..+
T Consensus 254 ~~dp~~Rps~~~ll~~l~~l~~p~~~ 279 (289)
T 4fvq_A 254 DYEPDHRPSFRAIIRDLNSLFTPDLV 279 (289)
T ss_dssp CSSGGGSCCHHHHHHHHHTCC-----
T ss_pred CCChhHCcCHHHHHHHHHHhcCCCCC
Confidence 99999999999999999987765543
No 155
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.1e-37 Score=345.41 Aligned_cols=258 Identities=22% Similarity=0.307 Sum_probs=206.3
Q ss_pred CCCcceee-eecccCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 806 FPSLSSCD-EAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~-~LG~GsfG~Vy~a~~----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
.++|.+.+ .||+|+||.||+|.+ .+..+|+|+.... ......+.+ .+|+.++++++||||+++++++.
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~----~~E~~~l~~l~h~~i~~~~~~~~ 80 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG---TEKADTEEM----MREAQIMHQLDNPYIVRLIGVCQ 80 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS---CCHHHHHHH----HHHHHHHHHCCCTTBCCEEEEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc---cchhHHHHH----HHHHHHHHhCCCCCEeEEEEEec
Confidence 34577776 999999999999986 3556777775422 223333444 79999999999999999999984
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
.. ..++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||
T Consensus 81 ~~---------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni 141 (287)
T 1u59_A 81 AE---------------ALMLVMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNV 141 (287)
T ss_dssp SS---------------SEEEEEECCTTEEHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred CC---------------CcEEEEEeCCCCCHHHHHHh----CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheE
Confidence 32 24999999999999999864 234699999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||+++
T Consensus 142 li~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 203 (287)
T 1u59_A 142 LLVNR-------HYAKISDFGLSKALGADDSYY-------TARSAGKWPLKWYAPECINF----RKFSSRSDVWSYGVTM 203 (287)
T ss_dssp EEEET-------TEEEECCCTTCEECTTCSCEE-------CCCCSSCCCGGGCCHHHHHH----CEECHHHHHHHHHHHH
T ss_pred EEcCC-------CCEEECcccceeeeccCccee-------eccccccccccccCHHHhcc----CCCCchhhHHHHHHHH
Confidence 99877 789999999997654322110 11123357899999999875 4678999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+|++ |+.||......+....+..+..+..+. ..++.+.+++.+||+.||.+
T Consensus 204 ~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~ 256 (287)
T 1u59_A 204 WEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP---------------------------ECPPELYALMSDCWIYKWED 256 (287)
T ss_dssp HHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSGGG
T ss_pred HHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCC---------------------------CcCHHHHHHHHHHcCCChhh
Confidence 99998 999998877777776666554332221 45567999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001142 1120 RPTAGDLYEMFVART 1134 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ 1134 (1142)
||++.+++++++...
T Consensus 257 Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 257 RPDFLTVEQRMRACY 271 (287)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHH
Confidence 999999999988753
No 156
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=8.1e-38 Score=355.82 Aligned_cols=259 Identities=22% Similarity=0.301 Sum_probs=201.8
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--Ccc----EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SAD----AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~----vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
....+|++.++||+|+||+||+|++. +.. +++|+.... . .......+ .+|+.++++++||||+++++
T Consensus 10 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~--~-~~~~~~~~----~~e~~~l~~l~h~~iv~~~~ 82 (325)
T 3kex_A 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDK--S-GRQSFQAV----TDHMLAIGSLDHAHIVRLLG 82 (325)
T ss_dssp CCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCT--T-SCSCBCSC----CHHHHHHHTCCCTTBCCEEE
T ss_pred cCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecccc--c-cHHHHHHH----HHHHHHHhcCCCCCcCeEEE
Confidence 34568999999999999999999984 333 555543211 1 11112233 68999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
++.+. ..++||||+++++|.+++.. ....+++..+..|+.||+.||.|||++||+||||||
T Consensus 83 ~~~~~---------------~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp 143 (325)
T 3kex_A 83 LCPGS---------------SLQLVTQYLPLGSLLDHVRQ----HRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAA 143 (325)
T ss_dssp EECBS---------------SEEEEEECCTTCBSHHHHHS----SGGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSS
T ss_pred EEcCC---------------ccEEEEEeCCCCCHHHHHHH----ccccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccch
Confidence 88532 24899999999999999874 124689999999999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
+|||++.+ +.+||+|||+++........ .......||+.|+|||++.+ ..++.++||||||
T Consensus 144 ~Nil~~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG 204 (325)
T 3kex_A 144 RNVLLKSP-------SQVQVADFGVADLLPPDDKQ--------LLYSEAKTPIKWMALESIHF----GKYTHQSDVWSYG 204 (325)
T ss_dssp TTEEESSS-------SCEEECSCSGGGGSCCCTTC--------CC-----CCTTTSCHHHHHH----CCCCHHHHHHHHH
T ss_pred heEEECCC-------CeEEECCCCcccccCccccc--------ccccCCCCcccccChHHhcc----CCCChhhHhHHhH
Confidence 99999877 78999999999865432211 11224468889999999976 5688999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1038 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1038 viL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
|++|+|++ |..||.+....+....+..+..+..+. ..+..+.+++.+||+.|
T Consensus 205 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~d 257 (325)
T 3kex_A 205 VTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQ---------------------------ICTIDVYMVMVKCWMID 257 (325)
T ss_dssp HHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCT---------------------------TBCTTTTHHHHHHTCSC
T ss_pred HHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCC---------------------------cCcHHHHHHHHHHcCCC
Confidence 99999999 999999877666666665544332221 22334788999999999
Q ss_pred CCCCCCHHHHHHHHHhhc
Q 001142 1117 PTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~~ 1134 (1142)
|.+|||+.++++++....
T Consensus 258 p~~Rps~~el~~~l~~~~ 275 (325)
T 3kex_A 258 ENIRPTFKELANEFTRMA 275 (325)
T ss_dssp TTTSCCHHHHHHHHHHHT
T ss_pred hhhCcCHHHHHHHHHHHH
Confidence 999999999999987643
No 157
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2e-37 Score=344.91 Aligned_cols=267 Identities=21% Similarity=0.307 Sum_probs=203.0
Q ss_pred CCCCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001142 801 LDPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 878 (1142)
Q Consensus 801 ~~~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~ 878 (1142)
++.....+|++.+.||+|+||+||+|++ .+..+|+|+............. .....+.+|+.++++++||||++++++
T Consensus 13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~ 91 (287)
T 4f0f_A 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI-EKFQEFQREVFIMSNLNHPNIVKLYGL 91 (287)
T ss_dssp CCBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHH-CCSHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred hhhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHH-HHHHHHHHHHHHHHhCCCCCchhhhee
Confidence 3344557899999999999999999998 4667888875443322222211 111345899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCC
Q 001142 879 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIK 956 (1142)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g--IvHrDLK 956 (1142)
+.+.. ++||||+++++|.+++.. ....+++..+..++.||+.||+|||++| |+|||||
T Consensus 92 ~~~~~----------------~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dik 151 (287)
T 4f0f_A 92 MHNPP----------------RMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR 151 (287)
T ss_dssp ETTTT----------------EEEEECCTTCBHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCS
T ss_pred ecCCC----------------eEEEEecCCCCHHHHHhc----ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCC
Confidence 86432 799999999999998864 2357999999999999999999999999 9999999
Q ss_pred CCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001142 957 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1036 (1142)
Q Consensus 957 p~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSL 1036 (1142)
|+|||++.++ ......+||+|||+++..... .....||+.|+|||++... ...++.++|||||
T Consensus 152 p~Nil~~~~~--~~~~~~~kl~Dfg~~~~~~~~-------------~~~~~g~~~y~aPE~~~~~--~~~~~~~~Di~sl 214 (287)
T 4f0f_A 152 SPNIFLQSLD--ENAPVCAKVADFGLSQQSVHS-------------VSGLLGNFQWMAPETIGAE--EESYTEKADTYSF 214 (287)
T ss_dssp GGGEEESCCC--TTCSCCEEECCCTTCBCCSSC-------------EECCCCCCTTSCGGGSSCS--SCEECHHHHHHHH
T ss_pred cceEEEeccC--CCCceeEEeCCCCcccccccc-------------ccccCCCccccCchhhccC--CCCcCchhhHHHH
Confidence 9999997652 112245999999999643321 1234689999999998431 2457899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHH--HHHHHHh-CCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1037 GCLLLELLTLQVPYMGLSELE--IHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1037 GviL~ELLtG~~Pf~~~~~~e--l~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
||++|+|++|+.||....... ....+.. ...+..+ ...++.+.+++.+||
T Consensus 215 G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l 267 (287)
T 4f0f_A 215 AMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP---------------------------EDCPPRLRNVIELCW 267 (287)
T ss_dssp HHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCC---------------------------TTSCHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCC---------------------------cccCHHHHHHHHHHh
Confidence 999999999999997654332 2333322 2111111 145667999999999
Q ss_pred ccCCCCCCCHHHHHHHHHh
Q 001142 1114 EENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~ 1132 (1142)
+.||.+|||+.|+++.+..
T Consensus 268 ~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 268 SGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CSSGGGSCCHHHHHHHHHT
T ss_pred cCChhhCcCHHHHHHHHHh
Confidence 9999999999999998753
No 158
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.3e-37 Score=347.65 Aligned_cols=263 Identities=24% Similarity=0.410 Sum_probs=195.1
Q ss_pred CCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~ 885 (1142)
-.+|++.++||+|+||+||+|++.+ .+|+|+.+.. .......+.+ .+|+.++++++||||++++++....
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~--- 92 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVT--APTPQQLQAF----KNEVGVLRKTRHVNILLFMGYSTAP--- 92 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCS--SCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSS---
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEecc--CCCHHHHHHH----HHHHHHHHhCCCCcEEEEEeeccCC---
Confidence 4569999999999999999999865 4888886543 3334444444 8999999999999999999975432
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 93 ------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~ 156 (289)
T 3og7_A 93 ------------QLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHED 156 (289)
T ss_dssp ------------SCEEEEECCCEEEHHHHHTT----C---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT
T ss_pred ------------ccEEEEEecCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC
Confidence 23899999999999999854 23568999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||++......... .......||+.|+|||++... ....++.++||||||+++|+|++
T Consensus 157 -------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~Di~slG~il~el~~ 220 (289)
T 3og7_A 157 -------NTVKIGDFGLATEKSRWSGS--------HQFEQLSGSILWMAPEVIRMQ-DSNPYSFQSDVYAFGIVLYELMT 220 (289)
T ss_dssp -------TEEEECCCC--------------------------CCCTTCCHHHHC-----CCSCHHHHHHHHHHHHHHHHH
T ss_pred -------CCEEEccceecccccccccc--------ccccccCCCccccCchhhccc-CCCCCCcccchHHHHHHHHHHHH
Confidence 78999999999754331111 112234689999999998632 12567889999999999999999
Q ss_pred CCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 LQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 G~~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|+.||.+....+ ....+..+....... .....+++.+.+++.+||+.||.+|||+.
T Consensus 221 g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 277 (289)
T 3og7_A 221 GQLPYSNINNRDQIIEMVGRGSLSPDLS-----------------------KVRSNCPKRMKRLMAECLKKKRDERPSFP 277 (289)
T ss_dssp SSCTTSSCCCHHHHHHHHHHTSCCCCTT-----------------------SSCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCccccchHHHHHHHhcccccCcchh-----------------------hccccCCHHHHHHHHHHccCChhhCCCHH
Confidence 999998754433 444444333221110 00114567799999999999999999999
Q ss_pred HHHHHHHhh
Q 001142 1125 DLYEMFVAR 1133 (1142)
Q Consensus 1125 EVL~~L~~~ 1133 (1142)
++++.+...
T Consensus 278 ell~~L~~l 286 (289)
T 3og7_A 278 RILAEIEEL 286 (289)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999988764
No 159
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.4e-37 Score=351.24 Aligned_cols=253 Identities=25% Similarity=0.467 Sum_probs=195.7
Q ss_pred CCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
..+..+|++.+.||+|+||.||+|++.+..+|+|+.. . ....+.+ .+|+.++++++||||+++++++.+.
T Consensus 4 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~--~----~~~~~~~----~~E~~~l~~l~hp~iv~~~~~~~~~ 73 (307)
T 2eva_A 4 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--S----ESERKAF----IVELRQLSRVNHPNIVKLYGACLNP 73 (307)
T ss_dssp BCCGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECS--S----TTHHHHH----HHHHHHHHHCCCTTBCCEEEBCTTT
T ss_pred cCCHhHeeeeeEeecCCCceEEEEEECCeeEEEEEec--C----hhHHHHH----HHHHHHHhcCCCCCcCeEEEEEcCC
Confidence 3456789999999999999999999999999998743 1 1223334 7999999999999999999987532
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCCCC
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---KHIMHRDIKSEN 959 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs---~gIvHrDLKp~N 959 (1142)
.++||||+++++|.+++... .....+++..+..++.||+.||.|||+ +||+||||||+|
T Consensus 74 ----------------~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~N 135 (307)
T 2eva_A 74 ----------------VCLVMEYAEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135 (307)
T ss_dssp ----------------TEEEEECCTTCBHHHHHHCS--SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGG
T ss_pred ----------------cEEEEEcCCCCCHHHHHhcc--CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhH
Confidence 28999999999999999752 112247899999999999999999999 899999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.++ ..+||+|||++...... .....||+.|+|||++.+ ..++.++||||||++
T Consensus 136 Ill~~~~------~~~kl~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~i 192 (307)
T 2eva_A 136 LLLVAGG------TVLKICDFGTACDIQTH-------------MTNNKGSAAWMAPEVFEG----SNYSEKCDVFSWGII 192 (307)
T ss_dssp EEEETTT------TEEEECCCCC-------------------------CCTTSSCHHHHTC----CCCCTHHHHHHHHHH
T ss_pred EEEeCCC------CEEEEcccccccccccc-------------cccCCCCCceEChhhhCC----CCCCcHHHHHHHHHH
Confidence 9998762 34899999999654321 112358999999999875 568899999999999
Q ss_pred HHHHHhCCCCCCCCC--HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1040 LLELLTLQVPYMGLS--ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~--~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+|+|++|+.||.... .......+..+..+... ...++.+.+++.+||+.||
T Consensus 193 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dp 245 (307)
T 2eva_A 193 LWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI---------------------------KNLPKPIESLMTRCWSKDP 245 (307)
T ss_dssp HHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCB---------------------------TTCCHHHHHHHHHHTCSSG
T ss_pred HHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcc---------------------------cccCHHHHHHHHHHhcCCh
Confidence 999999999997533 22233333333322211 1445679999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001142 1118 TERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~ 1133 (1142)
.+|||+.++++++...
T Consensus 246 ~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 246 SQRPSMEEIVKIMTHL 261 (307)
T ss_dssp GGSCCHHHHHHHHHHH
T ss_pred hhCcCHHHHHHHHHHH
Confidence 9999999999988764
No 160
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=5.2e-38 Score=356.37 Aligned_cols=268 Identities=21% Similarity=0.278 Sum_probs=200.9
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|.+. +..+|+|+...................+.+|+.++++++||||+++++++....
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 36899999999999999999984 567888876433211111111111223479999999999999999999986432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 89 --------------~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~ 149 (322)
T 2ycf_A 89 --------------YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149 (322)
T ss_dssp --------------EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred --------------eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEec
Confidence 4999999999999998854 357999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
++ ....+||+|||++......... ....||+.|+|||++... ....++.++|||||||++|+|+
T Consensus 150 ~~----~~~~~kl~Dfg~~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~-~~~~~~~~~Di~slG~il~~l~ 213 (322)
T 2ycf_A 150 QE----EDCLIKITDFGHSKILGETSLM-----------RTLCGTPTYLAPEVLVSV-GTAGYNRAVDCWSLGVILFICL 213 (322)
T ss_dssp SS----SSCCEEECCCTTCEECCCCHHH-----------HHHHSCCTTCCHHHHHHT-TTTTCTTHHHHHHHHHHHHHHH
T ss_pred CC----CCCeEEEccCccceeccccccc-----------ccccCCcCccCchhhccC-CCCCCCchhhHHHHHHHHHHHH
Confidence 52 1246999999999765432110 123589999999997531 1246789999999999999999
Q ss_pred hCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 TLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+|..||...... .+...+..+.....+.. ....++.+.+++.+||+.||.+|||+
T Consensus 214 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dP~~Rps~ 269 (322)
T 2ycf_A 214 SGYPPFSEHRTQVSLKDQITSGKYNFIPEV------------------------WAEVSEKALDLVKKLLVVDPKARFTT 269 (322)
T ss_dssp HSSCSSCSTTCSSCHHHHHHHTCCCCCHHH------------------------HTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred hCCCCCcccchHHHHHHHHHhCccccCchh------------------------hhhcCHHHHHHHHHHcccCHhhCCCH
Confidence 999999754322 23344444333222211 11456679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001142 1124 GDLYEMFVART 1134 (1142)
Q Consensus 1124 ~EVL~~L~~~~ 1134 (1142)
.++++|+|+..
T Consensus 270 ~~~l~h~~~~~ 280 (322)
T 2ycf_A 270 EEALRHPWLQD 280 (322)
T ss_dssp HHHHTSGGGCC
T ss_pred HHHhhCcCcCC
Confidence 99999999864
No 161
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=1.3e-37 Score=364.14 Aligned_cols=260 Identities=21% Similarity=0.299 Sum_probs=197.5
Q ss_pred CCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC--CCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--HpNIVkl~g~~~~~~ 883 (1142)
..|++.+.||+|+||.||+|.+. +..+|+|+..... ......+.+ .+|+.++++++ |||||++++++...+
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~--~~~~~~~~~----~~Ei~~l~~l~~~~~~iv~~~~~~~~~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSY----RNEIAYLNKLQQHSDKIIRLYDYEITDQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTT--CCHHHHHHH----HHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEeccc--ccHHHHHHH----HHHHHHHHHcccCCCeEEEEEEEEecCC
Confidence 35999999999999999999874 5678888865432 233333444 89999999996 599999999988655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++|||+ .+++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++
T Consensus 130 --------------~~~lv~E~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~ 189 (390)
T 2zmd_A 130 --------------YIYMVMEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 189 (390)
T ss_dssp --------------EEEEEEEC-CSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES
T ss_pred --------------EEEEEEec-CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE
Confidence 35999994 57999999986 34689999999999999999999999999999999999995
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-------CCCCCCchhhHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWSY 1036 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~s~ksDVwSL 1036 (1142)
. +.+||+|||+++.+...... .......||+.|+|||++.+.. ....++.++|||||
T Consensus 190 ~--------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSl 253 (390)
T 2zmd_A 190 D--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253 (390)
T ss_dssp S--------SCEEECCCSSSCCC-----------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHH
T ss_pred C--------CeEEEEecCccccccCCCcc--------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHH
Confidence 3 67999999999765432111 1122456999999999987521 11368899999999
Q ss_pred HHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCC-CCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001142 1037 GCLLLELLTLQVPYMGLSE-LEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1114 (1142)
Q Consensus 1037 GviL~ELLtG~~Pf~~~~~-~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~ 1114 (1142)
||++|||++|+.||..... ......+..... ...+ ...+..+.+||.+||+
T Consensus 254 Gvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~L~ 306 (390)
T 2zmd_A 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---------------------------DIPEKDLQDVLKCCLK 306 (390)
T ss_dssp HHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCC---------------------------CCSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCC---------------------------ccchHHHHHHHHHHcc
Confidence 9999999999999976432 222333222111 0000 0224568999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001142 1115 ENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1115 ~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
.||.+|||+.|+++|+|+...
T Consensus 307 ~dP~~Rps~~ell~hp~~~~~ 327 (390)
T 2zmd_A 307 RDPKQRISIPELLAHPYVQIQ 327 (390)
T ss_dssp SSTTTSCCHHHHHTSHHHHSC
T ss_pred cChhhCCCHHHHhhCcCcccc
Confidence 999999999999999999754
No 162
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=6.6e-38 Score=351.02 Aligned_cols=263 Identities=28% Similarity=0.441 Sum_probs=205.8
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.+.|++.+.||+|+||.||+|++. +..+|+|+..... ....+.+ .+|+.++++++||||+++++++...+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~----~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 89 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS----EEELEDY----IVEIEILATCDHPYIVKLLGAYYHDG 89 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHHH----HHHHHHHHHCCCTTBCCEEEEEECC-
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC----HHHHHHH----HHHHHHHhcCCCCCEeeeeeeeeeCC
Confidence 457999999999999999999985 5677888754221 1222333 78999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 90 --------------~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~ 151 (302)
T 2j7t_A 90 --------------KLWIMIEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT 151 (302)
T ss_dssp --------------CEEEEEECCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC
T ss_pred --------------eEEEEEEeCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC
Confidence 349999999999999998752 24689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGviL~E 1042 (1142)
.+ +.+||+|||++........ ......||+.|+|||++.... ....++.++||||||+++|+
T Consensus 152 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~ 214 (302)
T 2j7t_A 152 LE-------GDIRLADFGVSAKNLKTLQ----------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIE 214 (302)
T ss_dssp TT-------SCEEECCCHHHHHHHHHHH----------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEECCCCcccccccc----------ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHH
Confidence 77 7899999998754322110 112346899999999985211 13567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|..||...+.......+.....+.... ....+..+.+++.+||+.||.+|||
T Consensus 215 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rps 269 (302)
T 2j7t_A 215 MAQIEPPHHELNPMRVLLKIAKSDPPTLLT-------------------------PSKWSVEFRDFLKIALDKNPETRPS 269 (302)
T ss_dssp HHHSSCTTTTSCHHHHHHHHHHSCCCCCSS-------------------------GGGSCHHHHHHHHHHSCSCTTTSCC
T ss_pred HhcCCCCCccCCHHHHHHHHhccCCcccCC-------------------------ccccCHHHHHHHHHHcccChhhCCC
Confidence 999999999877766665554443322110 1144567999999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001142 1123 AGDLYEMFVARTSS 1136 (1142)
Q Consensus 1123 a~EVL~~L~~~~ss 1136 (1142)
+.++++|+|+....
T Consensus 270 ~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 270 AAQLLEHPFVSSIT 283 (302)
T ss_dssp HHHHTTSTTTTTCC
T ss_pred HHHHhcChHHhhhc
Confidence 99999999998543
No 163
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.3e-37 Score=351.43 Aligned_cols=260 Identities=22% Similarity=0.351 Sum_probs=201.5
Q ss_pred CCCCCcceeeeecccCceEEEEEEECCc------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFGSA------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~~------~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
....+|++.+.||+|+||.||+|.+... .+|+|+.... ........+ .+|+.++++++||||+++++
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~ 113 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG---YTEKQRVDF----LGEAGIMGQFSHHNIIRLEG 113 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT---CCHHHHHHH----HHHHHHHHTCCCTTBCCEEE
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC---CCHHHHHHH----HHHHHHHHhCCCCCCCcEEE
Confidence 3456799999999999999999987432 3777775422 122333334 79999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
++.+.+ ..++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||
T Consensus 114 ~~~~~~--------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp 175 (333)
T 1mqb_A 114 VISKYK--------------PMMIITEYMENGALDKFLRE----KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAA 175 (333)
T ss_dssp EECSSS--------------SEEEEEECCTTEEHHHHHHH----TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred EEecCC--------------CcEEEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence 987654 34999999999999999975 234689999999999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
+|||++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||
T Consensus 176 ~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG 237 (333)
T 1mqb_A 176 RNILVNSN-------LVCKVSDFGLSRVLEDDPEAT-------YTTSGGKIPIRWTAPEAISY----RKFTSASDVWSFG 237 (333)
T ss_dssp GGEEECTT-------CCEEECCCCC------------------------CCCGGGSCHHHHHS----CCCCHHHHHHHHH
T ss_pred heEEECCC-------CcEEECCCCcchhhccccccc-------cccCCCCccccccCchhccc----CCCCchhhhHHHH
Confidence 99999877 789999999997654321110 01112346888999999875 5688999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1038 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1038 viL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
+++|||++ |..||.+....++...+..+..+..+ ...++.+.+++.+||+.|
T Consensus 238 ~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~ 290 (333)
T 1mqb_A 238 IVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP---------------------------MDCPSAIYQLMMQCWQQE 290 (333)
T ss_dssp HHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC---------------------------TTCBHHHHHHHHHHTCSS
T ss_pred HHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCc---------------------------ccCCHHHHHHHHHHcCCC
Confidence 99999999 99999888777777766554332211 134567999999999999
Q ss_pred CCCCCCHHHHHHHHHhh
Q 001142 1117 PTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~ 1133 (1142)
|.+||++.++++++...
T Consensus 291 p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 291 RARRPKFADIVSILDKL 307 (333)
T ss_dssp TTTSCCHHHHHHHHHHH
T ss_pred hhhCcCHHHHHHHHHHH
Confidence 99999999999988754
No 164
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3e-37 Score=351.67 Aligned_cols=263 Identities=21% Similarity=0.218 Sum_probs=199.8
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~ 883 (1142)
.+|++.+.||+|+||.||+|++ .+..||+|+...+.. .+.+ .+|+.+++++ +||||+++++++...+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~----~~E~~~l~~l~~h~~i~~~~~~~~~~~ 78 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQL----HLEYRFYKQLGSGDGIPQVYYFGPCGK 78 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCCH----HHHHHHHHHHCSCTTSCCEEEEEEETT
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHHH----HHHHHHHHHhhCCCCCCEEEEEEecCC
Confidence 5799999999999999999996 577788888653321 1223 7899999999 8999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+ +++|.+++... ...+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 79 --------------~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 139 (330)
T 2izr_A 79 --------------YNAMVLELL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG 139 (330)
T ss_dssp --------------EEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred --------------ccEEEEEeC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec
Confidence 349999999 89999999862 34799999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.++. .....+||+|||+++.......... ..........||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 140 ~~~~--~~~~~~kl~DFg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el 210 (330)
T 2izr_A 140 RPGN--KTQQVIHIIDFALAKEYIDPETKKH---IPYREHKSLTGTARYMSINTHLG----KEQSRRDDLEALGHMFMYF 210 (330)
T ss_dssp CGGG--TCTTSEEECCCTTCEESBCTTTCCB---CCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHHHHH
T ss_pred cCCC--CCCceEEEEEcccceeeecCCCCcc---ccccccCCcCCCccccChHHHcC----CCCCchhHHHHHHHHHHHH
Confidence 7721 1112399999999986543221110 01112235679999999999876 5688999999999999999
Q ss_pred HhCCCCCCCCC---HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1044 LTLQVPYMGLS---ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~---~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
++|+.||.+.. ..+....+.....+..... .....+ .+.+++..||+.||.+|
T Consensus 211 l~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~-----------------------~~~~~p-~~~~li~~~l~~~p~~R 266 (330)
T 2izr_A 211 LRGSLPWQGLKADTLKERYQKIGDTKRATPIEV-----------------------LCENFP-EMATYLRYVRRLDFFEK 266 (330)
T ss_dssp HHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHH-----------------------HTTTCH-HHHHHHHHHHHCCTTCC
T ss_pred hcCCCCccccccccHHHHHHHHHhhhccCCHHH-----------------------HhccCh-HHHHHHHHHHhCCCCCC
Confidence 99999998743 2333333322111100000 000234 79999999999999999
Q ss_pred CCHHHHHHHHH
Q 001142 1121 PTAGDLYEMFV 1131 (1142)
Q Consensus 1121 PSa~EVL~~L~ 1131 (1142)
|++++|++.+.
T Consensus 267 P~~~~l~~~l~ 277 (330)
T 2izr_A 267 PDYDYLRKLFT 277 (330)
T ss_dssp CCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999988765
No 165
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3e-37 Score=354.72 Aligned_cols=293 Identities=19% Similarity=0.186 Sum_probs=200.1
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
..+++|++.+.||+|+||.||+|++. +..+|+|+....... ... ..+|+..+..++||||+++++++..
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~~----~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-----RNR----ELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-----CCH----HHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-----cHH----HHHHHHHHHhcCCCCcccHHHhhhc
Confidence 34678999999999999999999984 667888875422111 111 2578888889999999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--hCCccccCCCCCC
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--SKHIMHRDIKSEN 959 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLH--s~gIvHrDLKp~N 959 (1142)
.... .......++||||++ ++|...+..... ....+++..+..++.||+.||.||| ++||+||||||+|
T Consensus 91 ~~~~-------~~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~N 161 (360)
T 3e3p_A 91 LGER-------DRRDIYLNVVMEYVP-DTLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHN 161 (360)
T ss_dssp ECSS-------CTTCEEEEEEEECCS-CBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGG
T ss_pred cccc-------cccceeEEEEeeccc-ccHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHH
Confidence 4321 112335789999998 577666654332 3457899999999999999999999 9999999999999
Q ss_pred eeecc-ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 960 ILIDL-ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 960 ILld~-~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
||++. + +.+||+|||++....... ......||+.|+|||++.+ ...++.++|||||||
T Consensus 162 Ill~~~~-------~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~---~~~~~~~~Di~slG~ 220 (360)
T 3e3p_A 162 VLVNEAD-------GTLKLCDFGSAKKLSPSE-----------PNVAYICSRYYRAPELIFG---NQHYTTAVDIWSVGC 220 (360)
T ss_dssp EEEETTT-------TEEEECCCTTCBCCCTTS-----------CCCSTTSCGGGCCHHHHTT---CSSCCTHHHHHHHHH
T ss_pred EEEeCCC-------CcEEEeeCCCceecCCCC-----------CcccccCCcceeCHHHHcC---CCCCCcHHHHHHHHH
Confidence 99986 4 789999999997654321 1123468999999999865 245789999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccc-cccccccc-CCCCC--CchhhhhhHHHHHHHHHHhcc
Q 001142 1039 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-HEHEVAQS-GSGFE--KPEAELETLSFLVDVFRRCTE 1114 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-~~~~~~~~-~~~~~--~~~~~~~~~~~L~dLI~~CL~ 1114 (1142)
++|+|++|+.||.+.+.......+...........+...... ........ ...+. .+......++.+.+|+.+||+
T Consensus 221 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~ 300 (360)
T 3e3p_A 221 IFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQ 300 (360)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTC
T ss_pred HHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhc
Confidence 999999999999988777666555332221111111111000 00000000 00000 000011357789999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001142 1115 ENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1115 ~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
.||.+|||+.|+++|+|+...
T Consensus 301 ~dP~~Rpt~~e~l~hp~f~~~ 321 (360)
T 3e3p_A 301 YLPEERMKPYEALCHPYFDEL 321 (360)
T ss_dssp SSGGGSCCHHHHTTSGGGGGG
T ss_pred cCccccCCHHHHhcCcccccc
Confidence 999999999999999999865
No 166
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=347.26 Aligned_cols=267 Identities=22% Similarity=0.308 Sum_probs=198.4
Q ss_pred CCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
..++|++.++||+|+||+||+|.+. +..+|+|+.. . ......+.+ .+|+.++++++||||+++++++.+.
T Consensus 8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~--~--~~~~~~~~~----~~E~~~l~~l~hp~iv~~~~~~~~~ 79 (310)
T 3s95_A 8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELI--R--FDEETQRTF----LKEVKVMRCLEHPNVLKFIGVLYKD 79 (310)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEES--C--CCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEec--c--CCHHHHHHH----HHHHHHHHhCCCcCcccEEEEEecC
Confidence 3467999999999999999999985 5667777642 1 233444444 8999999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ..++||||+++++|.++++. ....+++..+..|+.||+.||+|||++||+||||||+|||+
T Consensus 80 ~--------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~ 141 (310)
T 3s95_A 80 K--------------RLNFITEYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV 141 (310)
T ss_dssp T--------------EEEEEEECCTTCBHHHHHHH----CCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE
T ss_pred C--------------eeEEEEEecCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE
Confidence 4 35999999999999999976 23569999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCccccccccccccc----ccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI----AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1038 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~----~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGv 1038 (1142)
+.+ +.+||+|||++............ ............||+.|+|||++.+ ..++.++||||||+
T Consensus 142 ~~~-------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~ 210 (310)
T 3s95_A 142 REN-------KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING----RSYDEKVDVFSFGI 210 (310)
T ss_dssp CTT-------SCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHH
T ss_pred CCC-------CCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcC----CCCCcHHHHHHHHH
Confidence 887 78999999999865432211000 0000011124579999999999976 57889999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1039 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1039 iL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
++|+|++|..||......... ............ ....+++.+.+++.+||+.||+
T Consensus 211 ~l~el~~g~~~~~~~~~~~~~------~~~~~~~~~~~~-------------------~~~~~~~~l~~li~~~l~~dP~ 265 (310)
T 3s95_A 211 VLCEIIGRVNADPDYLPRTMD------FGLNVRGFLDRY-------------------CPPNCPPSFFPITVRCCDLDPE 265 (310)
T ss_dssp HHHHHHHTCCSSTTTSCBCTT------SSBCHHHHHHHT-------------------CCTTCCTTHHHHHHHHTCSSGG
T ss_pred HHHHHhcCCCCCcchhhhHHH------Hhhhhhcccccc-------------------CCCCCCHHHHHHHHHHccCChh
Confidence 999999999998643211000 000000000000 0013445689999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001142 1119 ERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~ 1133 (1142)
+|||+.++++.+...
T Consensus 266 ~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 266 KRPSFVKLEHWLETL 280 (310)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999887653
No 167
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=2.7e-37 Score=354.11 Aligned_cols=297 Identities=20% Similarity=0.217 Sum_probs=207.8
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.++|++.+.||+|+||.||+|++. +..+|+|+.. . ......... +.+|+.++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~-~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~ 82 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--P-FDKPLFALR----TLREIKILKHFKHENIITIFNIQRPDS 82 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC--C-CSSHHHHHH----HHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeec--c-cccchHHHH----HHHHHHHHHhCcCCCcCCeeeeecccc
Confidence 467999999999999999999985 6667887753 2 122222333 379999999999999999999876532
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. .....++||||+. ++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 83 ~~---------~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~ 146 (353)
T 2b9h_A 83 FE---------NFNEVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146 (353)
T ss_dssp ST---------TCCCEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred cC---------ccceEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc
Confidence 11 1235699999997 799999875 3689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++........................||+.|+|||++.. ...++.++|||||||++|+|
T Consensus 147 ~~-------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l 216 (353)
T 2b9h_A 147 SN-------CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT---SAKYSRAMDVWSCGCILAEL 216 (353)
T ss_dssp TT-------CCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHS---CCCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEEecccccccccccccccCccccccchhhccccccccCCeeecc---CCCccchhhHHHHHHHHHHH
Confidence 87 789999999998754322111000000111223468999999998764 24688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhcccccccccccCCCCC---CchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1044 LTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFE---KPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
++|+.||.+.+..+....+.. ...+......................... ........++.+.+|+.+||+.||.+
T Consensus 217 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 296 (353)
T 2b9h_A 217 FLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296 (353)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGG
T ss_pred HhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCccc
Confidence 999999998776655444321 11111110000000000000000000000 00111255678999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001142 1120 RPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~s 1135 (1142)
|||+.|+++|+|++..
T Consensus 297 Rpt~~ell~hp~~~~~ 312 (353)
T 2b9h_A 297 RITAKEALEHPYLQTY 312 (353)
T ss_dssp SCCHHHHHTSGGGTTT
T ss_pred CCCHHHHhcCcccccc
Confidence 9999999999999864
No 168
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=3.1e-37 Score=350.29 Aligned_cols=277 Identities=20% Similarity=0.234 Sum_probs=202.1
Q ss_pred CCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 880 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~ 880 (1142)
...++|++.+.||+|+||+||+|++ .+..+|+|+.... . .+.+ .+|+.++++++ ||||+++++++.
T Consensus 33 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~---~~~~----~~E~~~l~~l~~~~~i~~~~~~~~ 101 (330)
T 3nsz_A 33 GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----K---KKKI----KREIKILENLRGGPNIITLADIVK 101 (330)
T ss_dssp EEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----C---HHHH----HHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred cCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----c---hHHH----HHHHHHHHHcCCCCCEEEeeeeec
Confidence 3456799999999999999999987 5677888875311 1 1233 78999999997 999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+... ...++||||+++++|.++++ .+++..+..++.||+.||+|||++||+||||||+||
T Consensus 102 ~~~~------------~~~~lv~e~~~~~~l~~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Ni 161 (330)
T 3nsz_A 102 DPVS------------RTPALVFEHVNNTDFKQLYQ--------TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNV 161 (330)
T ss_dssp CTTT------------CCEEEEEECCCCCCHHHHGG--------GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred cCCC------------CceEEEEeccCchhHHHHHH--------hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHE
Confidence 6321 24599999999999998874 388999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.++ ..+||+|||+++...... ......||+.|+|||++.+ ...++.++|||||||++
T Consensus 162 l~~~~~------~~~kl~Dfg~a~~~~~~~-----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il 221 (330)
T 3nsz_A 162 MIDHEH------RKLRLIDWGLAEFYHPGQ-----------EYNVRVASRYFKGPELLVD---YQMYDYSLDMWSLGCML 221 (330)
T ss_dssp EEETTT------TEEEECCCTTCEECCTTC-----------CCCSCCSCGGGCCHHHHTT---CCCCCTHHHHHHHHHHH
T ss_pred EEcCCC------CEEEEEeCCCceEcCCCC-----------ccccccccccccChhhhcC---CCcCCchhhHHHHHHHH
Confidence 998662 389999999997654321 1123468999999999865 24688999999999999
Q ss_pred HHHHhCCCCCCCC-CHHHHHHHH-------------HhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001142 1041 LELLTLQVPYMGL-SELEIHDLI-------------QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1106 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~-~~~el~~~I-------------~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1106 (1142)
|+|++|+.||... ...+....+ ........+.............+. ...........++.+.
T Consensus 222 ~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 297 (330)
T 3nsz_A 222 ASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWE----RFVHSENQHLVSPEAL 297 (330)
T ss_dssp HHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGG----GGCCTTTGGGCCHHHH
T ss_pred HHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchh----hhccccccccCCHHHH
Confidence 9999999999543 222222221 111110000000000000000000 0001111224678899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1107 DVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1107 dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+||.+||+.||.+|||++|+++|+|+...
T Consensus 298 ~li~~~L~~dP~~Rpta~e~l~hp~f~~~ 326 (330)
T 3nsz_A 298 DFLDKLLRYDHQSRLTAREAMEHPYFYTV 326 (330)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHHhcCCcccCCCHHHHhcCccHhhh
Confidence 99999999999999999999999999854
No 169
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.2e-37 Score=346.39 Aligned_cols=254 Identities=23% Similarity=0.397 Sum_probs=205.6
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.+.||+|+||.||+|.+. +..+|+|+.... ....+.+ .+|+.++++++||||+++++++.+..
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~----~~E~~~l~~l~h~~i~~~~~~~~~~~ 82 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-----TMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREP 82 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-----STHHHHH----HHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-----HHHHHHH----HHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 457999999999999999999986 556777765321 1223344 78999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++||||+++++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 83 ~--------------~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~ 145 (288)
T 3kfa_A 83 P--------------FYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 145 (288)
T ss_dssp S--------------EEEEEECCTTEEHHHHHHH---CCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC
T ss_pred C--------------EEEEEEcCCCCcHHHHHHh---cccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc
Confidence 3 4999999999999999976 3345699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||.+......... ......+|+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 146 ~~-------~~~~l~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 205 (288)
T 3kfa_A 146 EN-------HLVKVADFGLSRLMTGDTYT---------AHAGAKFPIKWTAPESLAY----NKFSIKSDVWAFGVLLWEI 205 (288)
T ss_dssp GG-------GCEEECCCCGGGTSCSSSSE---------EETTEEECGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccCccceeccCCccc---------cccCCccccCcCChhhhcc----CCCCchhhHHHHHHHHHHH
Confidence 87 78999999999765432211 1123357888999999976 5688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |..||.+....+....+.....+..+ ...++.+.+++.+||+.||.+|||
T Consensus 206 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dp~~Rps 258 (288)
T 3kfa_A 206 ATYGMSPYPGIDLSQVYELLEKDYRMERP---------------------------EGCPEKVYELMRACWQWNPSDRPS 258 (288)
T ss_dssp HTTSCCSSTTCCGGGHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHhccCCCCCC---------------------------CCCCHHHHHHHHHHhCCChhhCcC
Confidence 99 99999887766666665544322211 144567999999999999999999
Q ss_pred HHHHHHHHHh
Q 001142 1123 AGDLYEMFVA 1132 (1142)
Q Consensus 1123 a~EVL~~L~~ 1132 (1142)
+.++++.+..
T Consensus 259 ~~~~~~~l~~ 268 (288)
T 3kfa_A 259 FAEIHQAFET 268 (288)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999988754
No 170
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2e-37 Score=353.51 Aligned_cols=261 Identities=19% Similarity=0.325 Sum_probs=199.5
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEE--EecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKV--RTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi--~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
....+|++.++||+|+||.||+|.+. +..+++|+ +.+.... .....+. +.+|+.++++++||||+++++++
T Consensus 12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~ 86 (327)
T 3lzb_A 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKE----ILDEAYVMASVDNPHVCRLLGIC 86 (327)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHH----HHHHHHHHTTCCBTTBCCCCEEE
T ss_pred cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHH----HHHHHHHHHhCCCCCeeEEEEEE
Confidence 34567999999999999999999983 44443332 2222111 1122233 37899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
.... .++||||+++++|.+++... ...+++..+..|+.||+.||.|||++||+||||||+|
T Consensus 87 ~~~~---------------~~~v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N 147 (327)
T 3lzb_A 87 LTST---------------VQLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 147 (327)
T ss_dssp ESSS---------------EEEEECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred ecCC---------------ceEEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHH
Confidence 7543 38999999999999999762 3468999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||+++......... ......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 148 Il~~~~-------~~~kL~DfG~a~~~~~~~~~~--------~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~i 208 (327)
T 3lzb_A 148 VLVKTP-------QHVKITDFGLAKLLGAEEKEY--------HAEGGKVPIKWMALESILH----RIYTHQSDVWSYGVT 208 (327)
T ss_dssp EEEEET-------TEEEECCTTC------------------------CCCGGGSCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEccCcceeEccCccccc--------cccCCCccccccCHHHHcC----CCCChHHHHHHHHHH
Confidence 999887 789999999997654322111 1123347889999999986 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|+|++ |..||.+....++...+..+..+..+. ..+..+.+++.+||+.||.
T Consensus 209 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~ 261 (327)
T 3lzb_A 209 VWELMTFGSKPYDGIPASEISSILEKGERLPQPP---------------------------ICTIDVYMIMRKCWMIDAD 261 (327)
T ss_dssp HHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT---------------------------TBCHHHHHHHHHHTCSSGG
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHHcCCChh
Confidence 999999 999999877776666665544322211 3456799999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001142 1119 ERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ 1134 (1142)
+|||+.|+++.+....
T Consensus 262 ~Rps~~ell~~L~~~~ 277 (327)
T 3lzb_A 262 SRPKFRELIIEFSKMA 277 (327)
T ss_dssp GSCCHHHHHHHHHHHH
T ss_pred HCcCHHHHHHHHHHHH
Confidence 9999999999887653
No 171
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.6e-37 Score=377.51 Aligned_cols=263 Identities=21% Similarity=0.285 Sum_probs=208.8
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
+...++|++.++||+|+||.||+|++. +..+|+|+...... ........+.+|+.++++++||||+++++++.
T Consensus 181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~-----~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~ 255 (543)
T 3c4z_A 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRL-----KKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255 (543)
T ss_dssp CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHh-----hhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 345678999999999999999999984 67788888643211 11111233478999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.. ..|+||||++||+|.+++.... .....+++..++.++.||+.||.|||++||+||||||+||
T Consensus 256 ~~~--------------~l~lVmE~~~gg~L~~~l~~~~-~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NI 320 (543)
T 3c4z_A 256 TKT--------------DLCLVMTIMNGGDIRYHIYNVD-EDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320 (543)
T ss_dssp CSS--------------EEEEEECCCTTCBHHHHHHTSS-TTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred eCC--------------EEEEEEEeccCCCHHHHHHHhh-cccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHE
Confidence 655 3599999999999999987522 1234699999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..|+.++|||||||++
T Consensus 321 Ll~~~-------g~vkL~DFGla~~~~~~~~----------~~~~~~GT~~Y~APE~l~~----~~~~~~~DiwSlGvil 379 (543)
T 3c4z_A 321 LLDDD-------GNVRISDLGLAVELKAGQT----------KTKGYAGTPGFMAPELLLG----EEYDFSVDYFALGVTL 379 (543)
T ss_dssp EECTT-------SCEEECCCTTCEECCTTCC----------CBCCCCSCTTTSCHHHHTT----CCBCTHHHHHHHHHHH
T ss_pred EEeCC-------CCEEEeecceeeeccCCCc----------ccccccCCccccChhhhcC----CCCChHHhcCcchHHH
Confidence 99887 7899999999976543211 1123479999999999976 5688999999999999
Q ss_pred HHHHhCCCCCCCCC----HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1041 LELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
|||++|+.||.+.. ..++...+...... .+ ...++.+.+||.+||+.|
T Consensus 380 yelltG~~PF~~~~~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~d 431 (543)
T 3c4z_A 380 YEMIAARGPFRARGEKVENKELKQRVLEQAVT-YP---------------------------DKFSPASKDFCEALLQKD 431 (543)
T ss_dssp HHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHSCSS
T ss_pred HHHHhCCCCCCCCccchhHHHHHHHHhhcccC-CC---------------------------cccCHHHHHHHHHhccCC
Confidence 99999999997642 34444444332211 00 145567999999999999
Q ss_pred CCCCCC-----HHHHHHHHHhhc
Q 001142 1117 PTERPT-----AGDLYEMFVART 1134 (1142)
Q Consensus 1117 P~~RPS-----a~EVL~~L~~~~ 1134 (1142)
|.+||+ +++|++|+|++.
T Consensus 432 P~~R~~~~~~~a~ei~~Hpff~~ 454 (543)
T 3c4z_A 432 PEKRLGFRDGSCDGLRTHPLFRD 454 (543)
T ss_dssp GGGSCCCBTTBSHHHHTSGGGTT
T ss_pred HhHCCCCcccCHHHHHcCccccC
Confidence 999996 589999999986
No 172
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-37 Score=356.28 Aligned_cols=264 Identities=25% Similarity=0.345 Sum_probs=202.5
Q ss_pred CCCCcceeeeecccCceEEEEEEE-------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 876 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~-------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~ 876 (1142)
...+|++.+.||+|+||.||+|++ .+..+|+|+..... .....+ .+.+|+.+++++ +||||++++
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~----~~~~E~~~l~~l~~hp~iv~~~ 115 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSERE----ALMSELKMMTQLGSHENIVNLL 115 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------CH----HHHHHHHHHHHHCCCTTBCCEE
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHHH----HHHHHHHHHHhhcCCCCeeeEE
Confidence 346799999999999999999997 23457888754221 112222 347999999999 899999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc------------------CCCCCCHHHHHHHHHHH
Q 001142 877 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------GEKHVSVKLALFIAQDV 938 (1142)
Q Consensus 877 g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~------------------~~~~ls~~~i~~Ia~qI 938 (1142)
+++...+.. ++||||+++++|.+++...... ....+++..+..++.||
T Consensus 116 ~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 181 (344)
T 1rjb_A 116 GACTLSGPI--------------YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQV 181 (344)
T ss_dssp EEECSSSSC--------------EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHH
T ss_pred EEEeeCCcc--------------EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHH
Confidence 999875543 9999999999999999752110 01347999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhh
Q 001142 939 AAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVL 1018 (1142)
Q Consensus 939 a~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 1018 (1142)
+.||.|||++||+||||||+|||++.+ +.+||+|||++......... .......||+.|+|||++
T Consensus 182 ~~aL~~LH~~~ivH~Dikp~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~~t~~y~aPE~~ 246 (344)
T 1rjb_A 182 AKGMEFLEFKSCVHRDLAARNVLVTHG-------KVVKICDFGLARDIMSDSNY--------VVRGNARLPVKWMAPESL 246 (344)
T ss_dssp HHHHHHHHHTTEEETTCSGGGEEEETT-------TEEEECCCGGGSCGGGCTTS--------EEETTEEECGGGCCHHHH
T ss_pred HHHHHHHHhCCcccCCCChhhEEEcCC-------CcEEeCCCccCcccccCccc--------eeccCccCccCccCHHHh
Confidence 999999999999999999999999887 78999999999765432211 011234578899999998
Q ss_pred ccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH-HHHHHhCCCCCchhHHhhhcccccccccccCCCCCCch
Q 001142 1019 RAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEI-HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE 1096 (1142)
Q Consensus 1019 ~~~~~~~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el-~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 1096 (1142)
.+ ..++.++||||||+++|+|++ |..||.+...... ...+..+..+..+
T Consensus 247 ~~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------- 297 (344)
T 1rjb_A 247 FE----GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQP------------------------- 297 (344)
T ss_dssp HH----CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCC-------------------------
T ss_pred cc----CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCC-------------------------
Confidence 76 568899999999999999998 9999987654333 3333333222111
Q ss_pred hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1097 AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1097 ~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
...++.+.+|+.+||+.||.+|||+.++++++.....
T Consensus 298 --~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 298 --FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred --CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 1345679999999999999999999999999987654
No 173
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=1.8e-37 Score=374.25 Aligned_cols=256 Identities=23% Similarity=0.392 Sum_probs=207.3
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..+|++.++||+|+||.||+|.+. +..||+|+. +.... ..+.+ .+|+.+|++++|||||++++++....
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~--~~~~~---~~~~~----~~E~~~l~~l~hpniv~l~~~~~~~~ 289 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL--KEDTM---EVEEF----LKEAAVMKEIKHPNLVQLLGVCTREP 289 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEEC--CSSSS---CHHHH----HHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEe--cCccc---chHHH----HHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 456899999999999999999996 456677664 33221 22344 79999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.+ ++||||+++|+|.++++. .....+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 290 ~~--------------~lv~E~~~~g~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~ 352 (495)
T 1opk_A 290 PF--------------YIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 352 (495)
T ss_dssp SC--------------EEEEECCTTCBHHHHHHH---SCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred cE--------------EEEEEccCCCCHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC
Confidence 43 999999999999999986 2335689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+++........ ......+++.|+|||++.. ..++.++|||||||++|||
T Consensus 353 ~~-------~~~kl~DFG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwSlG~~l~el 412 (495)
T 1opk_A 353 EN-------HLVKVADFGLSRLMTGDTYT---------AHAGAKFPIKWTAPESLAY----NKFSIKSDVWAFGVLLWEI 412 (495)
T ss_dssp GG-------GCEEECCTTCEECCTTCCEE---------CCTTCCCCGGGCCHHHHHH----CEECHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEeecccceeccCCcee---------ecCCCcCCcceeCHhHHhc----CCCCcHHhHHhHHHHHHHH
Confidence 87 78999999999765432111 1123346788999999876 5688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |..||.+.+..++...+..+.....+ ..+++.+.+|+.+||+.||.+|||
T Consensus 413 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dP~~RPs 465 (495)
T 1opk_A 413 ATYGMSPYPGIDLSQVYELLEKDYRMERP---------------------------EGCPEKVYELMRACWQWNPSDRPS 465 (495)
T ss_dssp HTTSCCSSTTCCGGGHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcCcChhHCcC
Confidence 99 99999987776666666544332211 145567999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001142 1123 AGDLYEMFVART 1134 (1142)
Q Consensus 1123 a~EVL~~L~~~~ 1134 (1142)
+.+|++.+....
T Consensus 466 ~~el~~~L~~~~ 477 (495)
T 1opk_A 466 FAEIHQAFETMF 477 (495)
T ss_dssp HHHHHHHHHTSC
T ss_pred HHHHHHHHHHHH
Confidence 999999887653
No 174
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=6.7e-38 Score=345.99 Aligned_cols=262 Identities=24% Similarity=0.294 Sum_probs=204.1
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|.+. +..+|+|+...... ....+. +.+|+.+++.++||||+++++++.+.+
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~- 78 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPEN----IKKEICINKMLNHENVVKFYGHRREGN- 78 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHHH----HHHHHHHHHTCCCTTBCCEEEEEEETT-
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhHH----HHHHHHHHHhcCCCCceeeeeEEEcCC-
Confidence 56999999999999999999984 67788888654432 122233 378999999999999999999988654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 79 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~ 140 (276)
T 2yex_A 79 -------------IQYLFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE 140 (276)
T ss_dssp -------------EEEEEEECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred -------------EEEEEEEecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEcc
Confidence 34999999999999988753 356899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||.+......... .......||+.|+|||++.+ ...++.++||||||+++|+|+
T Consensus 141 ~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l~ 202 (276)
T 2yex_A 141 R-------DNLKISDFGLATVFRYNNRE--------RLLNKMCGTLPYVAPELLKR---REFHAEPVDVWSCGIVLTAML 202 (276)
T ss_dssp T-------CCEEECCCTTCEECEETTEE--------CCBCCCCSCGGGCCGGGGTC---SSBCHHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeeCCCccccCCCcch--------hcccCCccccCccChHHHhc---CCCCCCcchHHHHHHHHHHHH
Confidence 7 78999999999765432111 01123468999999999875 123468999999999999999
Q ss_pred hCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 TLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 tG~~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+|+.||...... .....+...... .. .....++.+.+++.+||+.||.+|||+
T Consensus 203 ~g~~p~~~~~~~~~~~~~~~~~~~~-~~-------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~ 256 (276)
T 2yex_A 203 AGELPWDQPSDSCQEYSDWKEKKTY-LN-------------------------PWKKIDSAPLALLHKILVENPSARITI 256 (276)
T ss_dssp HSSCCCSCSCTTSHHHHHHHTTCTT-ST-------------------------TGGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred hCCCCCCCCchHHHHHHHhhhcccc-cC-------------------------chhhcCHHHHHHHHHHCCCCchhCCCH
Confidence 999999765432 122222211110 00 001456678999999999999999999
Q ss_pred HHHHHHHHhhcCCCC
Q 001142 1124 GDLYEMFVARTSSSI 1138 (1142)
Q Consensus 1124 ~EVL~~L~~~~ss~~ 1138 (1142)
.|+++|+|+......
T Consensus 257 ~~il~~~~~~~~~~~ 271 (276)
T 2yex_A 257 PDIKKDRWYNKPLKK 271 (276)
T ss_dssp HHHTTCTTTTCCCC-
T ss_pred HHHhcCccccChhhc
Confidence 999999999866544
No 175
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.3e-37 Score=348.02 Aligned_cols=263 Identities=24% Similarity=0.376 Sum_probs=204.5
Q ss_pred CCCcceeeeecccCceEEEEEEE-------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~-------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g 877 (1142)
..+|++.+.||+|+||.||+|++ .+..+|+|+.... ......+.+ .+|+.+++++ +||||+++++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~----~~E~~~l~~l~~h~~i~~~~~ 94 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS---AHLTEREAL----MSELKVLSYLGNHMNIVNLLG 94 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHHH----HHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc---hhHHHHHHH----HHHHHHHhhcccCCCeeeEEE
Confidence 45799999999999999999986 2356788875422 222333334 8999999999 8999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-------------cCCCCCCHHHHHHHHHHHHHHHHH
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-------------TGEKHVSVKLALFIAQDVAAALVE 944 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-------------~~~~~ls~~~i~~Ia~qIa~gL~y 944 (1142)
++.+.+.. ++||||+++++|.+++..... .....+++..+..++.||+.||.|
T Consensus 95 ~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 160 (313)
T 1t46_A 95 ACTIGGPT--------------LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAF 160 (313)
T ss_dssp EECSSSSC--------------EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHH
T ss_pred EEecCCCc--------------EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 99875543 999999999999999986321 112358999999999999999999
Q ss_pred HHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 945 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 945 LHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
||++||+||||||+|||++.+ +.+||+|||++......... .......||+.|+|||++.+
T Consensus 161 lH~~~i~H~dlkp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~---- 221 (313)
T 1t46_A 161 LASKNCIHRDLAARNILLTHG-------RITKICDFGLARDIKNDSNY--------VVKGNARLPVKWMAPESIFN---- 221 (313)
T ss_dssp HHHTTCCCSCCSGGGEEEETT-------TEEEECCCGGGSCTTSCTTS--------EECSSSEECGGGCCHHHHHH----
T ss_pred HHHCCeecCCCccceEEEcCC-------CCEEEccccccccccccccc--------eeccCCCCcceeeChHHhcC----
Confidence 999999999999999999877 78999999999765432211 01223457889999999876
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhH
Q 001142 1025 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1102 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1142)
..++.++||||||+++|+|++ |..||.+..... ....+.....+..+ ...+
T Consensus 222 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 274 (313)
T 1t46_A 222 CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP---------------------------EHAP 274 (313)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCC---------------------------TTSC
T ss_pred CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCc---------------------------ccCC
Confidence 568899999999999999999 999998755433 33333332221111 1445
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1103 SFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1103 ~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+.+.+++.+||+.||.+|||+.|+++++.....
T Consensus 275 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~ 307 (313)
T 1t46_A 275 AEMYDIMKTCWDADPLKRPTFKQIVQLIEKQIS 307 (313)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 679999999999999999999999999876543
No 176
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.4e-38 Score=357.78 Aligned_cols=261 Identities=20% Similarity=0.246 Sum_probs=204.1
Q ss_pred ccee-eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001142 809 LSSC-DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 884 (1142)
Q Consensus 809 y~l~-~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~ 884 (1142)
|.+. +.||+|+||.||+|.+. +..+|+|+...... ....... +.+|+.++.++. ||||+++++++.+..
T Consensus 30 y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~----~~~e~~~l~~l~~~~~iv~~~~~~~~~~- 102 (327)
T 3lm5_A 30 YILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR--GQDCRAE----ILHEIAVLELAKSCPRVINLHEVYENTS- 102 (327)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET--TEECHHH----HHHHHHHHHHTTTCTTBCCEEEEEECSS-
T ss_pred EeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHH----HHHHHHHHHhccCCCCEEEEEEEEEeCC-
Confidence 6666 89999999999999984 67889988654321 2222223 378999999995 799999999998654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. .....+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 103 -------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~ 166 (327)
T 3lm5_A 103 -------------EIILILEYAAGGEIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSS 166 (327)
T ss_dssp -------------EEEEEEECCTTEEGGGGGSS---CC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESC
T ss_pred -------------eEEEEEEecCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEec
Confidence 35999999999999988743 22356999999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
.. ..+.+||+|||++........ .....||+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 167 ~~----~~~~~kL~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~ll 227 (327)
T 3lm5_A 167 IY----PLGDIKIVDFGMSRKIGHACE-----------LREIMGTPEYLAPEILNY----DPITTATDMWNIGIIAYMLL 227 (327)
T ss_dssp BT----TBCCEEECCGGGCEEC--------------------CCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CC----CCCcEEEeeCccccccCCccc-----------cccccCCcCccCCeeecC----CCCCchhhHHHHHHHHHHHH
Confidence 21 116899999999976543211 123469999999999875 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|+.||.+....+....+.......... .....++.+.+++.+||+.||.+|||++
T Consensus 228 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 283 (327)
T 3lm5_A 228 THTSPFVGEDNQETYLNISQVNVDYSEE------------------------TFSSVSQLATDFIQSLLVKNPEKRPTAE 283 (327)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCCCTT------------------------TTTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred hCCCCCCCCCchHHHHHHHhcccccCch------------------------hhcccCHHHHHHHHHHcCCChhhCcCHH
Confidence 9999999887777666654433221110 0014566799999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001142 1125 DLYEMFVARTS 1135 (1142)
Q Consensus 1125 EVL~~L~~~~s 1135 (1142)
|+++|+|++..
T Consensus 284 ~ll~h~~~~~~ 294 (327)
T 3lm5_A 284 ICLSHSWLQQW 294 (327)
T ss_dssp HHTTCGGGCCC
T ss_pred HHhCCHhhccc
Confidence 99999999754
No 177
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=9e-38 Score=346.40 Aligned_cols=253 Identities=24% Similarity=0.362 Sum_probs=200.1
Q ss_pred CCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
....+|++.+.||+|+||.||+|++.+..+|+|+.... ...+.+ .+|+.++++++||||+++++++.+..
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~------~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND------ATAQAF----LAEASVMTQLRHSNLVQLLGVIVEEK 87 (278)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC------C--HHH----HHTHHHHTTCCCTTBCCEEEEECCC-
T ss_pred CChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecch------hHHHHH----HHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 34678999999999999999999999999999985421 122333 78999999999999999999876432
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
...++||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 88 -------------~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~ 151 (278)
T 1byg_A 88 -------------GGLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS 151 (278)
T ss_dssp --------------CCEEEECCCTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred -------------CceEEEEecCCCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe
Confidence 12499999999999999997632 12478999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++....... ....+++.|+|||++.+ ..++.++||||||+++|+|
T Consensus 152 ~~-------~~~~l~Dfg~~~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 207 (278)
T 1byg_A 152 ED-------NVAKVSDFGLTKEASSTQ-------------DTGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEI 207 (278)
T ss_dssp TT-------SCEEECCCCC-------------------------CCTTTSCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEeeccccccccccc-------------cCCCccccccCHHHhCC----CCCCchhcHHHHHHHHHHH
Confidence 77 789999999987543211 12357889999999876 5688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ |..||......+....+..+..+..+ ...++.+.+++.+||+.||.+|||
T Consensus 208 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~p~~Rps 260 (278)
T 1byg_A 208 YSFGRVPYPRIPLKDVVPRVEKGYKMDAP---------------------------DGCPPAVYEVMKNCWHLDAAMRPS 260 (278)
T ss_dssp HTTSCCSCTTSCGGGHHHHHTTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHhcCCCCCCc---------------------------ccCCHHHHHHHHHHhcCChhhCCC
Confidence 98 99999877666655555443322211 145567999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001142 1123 AGDLYEMFVAR 1133 (1142)
Q Consensus 1123 a~EVL~~L~~~ 1133 (1142)
+.|+++.+...
T Consensus 261 ~~~l~~~L~~i 271 (278)
T 1byg_A 261 FLQLREQLEHI 271 (278)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988764
No 178
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.4e-37 Score=344.91 Aligned_cols=263 Identities=22% Similarity=0.346 Sum_probs=200.5
Q ss_pred CCcceeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~---~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
..|++.++||+|+||+||+|++. +..++++++.++.. ......+.+ .+|+.++++++||||+++++++...+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 99 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQF----LTEGIIMKDFSHPNVLSLLGICLRSE 99 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHH----HHHHHHHHTCCCTTBCCCCEEECCSS
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHH----HHHHHHHHhCCCCCEeeeeeEEEcCC
Confidence 46899999999999999999863 33334444444432 223333444 79999999999999999999865432
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. ..++||||+++++|.++++. ....+++..+..|+.||+.||.|||++||+||||||+|||++
T Consensus 100 ~-------------~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~ 162 (298)
T 3f66_A 100 G-------------SPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD 162 (298)
T ss_dssp S-------------CCEEEEECCTTCBHHHHHHC----TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred C-------------ceEEEEeCCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEC
Confidence 1 24899999999999999964 235689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||+++......... ........||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 163 ~~-------~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 225 (298)
T 3f66_A 163 EK-------FTVKVADFGLARDMYDKEYYS------VHNKTGAKLPVKWMALESLQT----QKFTTKSDVWSFGVLLWEL 225 (298)
T ss_dssp TT-------CCEEECSCGGGCCCSCGGGCB------C-----CCBCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEECcccccccccccchhc------cccccCCCCCccccChHHhcC----CCCChHHHHHHHHHHHHHH
Confidence 77 789999999997654322111 111223457889999999976 5688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1044 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1044 Lt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
++ +.+||.+....+....+..+..+..+. ..++.+.+++.+||+.||.+|||
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps 278 (298)
T 3f66_A 226 MTRGAPPYPDVNTFDITVYLLQGRRLLQPE---------------------------YCPDPLYEVMLKCWHPKAEMRPS 278 (298)
T ss_dssp HTTSCCSSTTSCTTTHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCccCCHHHHHHHHhcCCCCCCCc---------------------------cCCHHHHHHHHHHcCCChhhCcC
Confidence 99 677777665555555554443322111 34567999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001142 1123 AGDLYEMFVARTS 1135 (1142)
Q Consensus 1123 a~EVL~~L~~~~s 1135 (1142)
+.|+++.+.....
T Consensus 279 ~~ell~~L~~~~~ 291 (298)
T 3f66_A 279 FSELVSRISAIFS 291 (298)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999998876543
No 179
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.3e-37 Score=346.83 Aligned_cols=267 Identities=22% Similarity=0.346 Sum_probs=200.8
Q ss_pred CCCcceeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-----~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
..+|++.+.||+|+||.||+|.+.. ..+|+|+.. .........+.+ .+|+.++++++||||+++++++.
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~ 106 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMK--LDNSSQREIEEF----LSEAACMKDFSHPNVIRLLGVCI 106 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC-----CCCHHHHHHH----HHHHHHHHTCCCTTBCCCCEEEE
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEe--ccccchhHHHHH----HHHHHHHhcCCCCCeeeeeEEEe
Confidence 3569999999999999999998732 257777643 223333444444 79999999999999999999988
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc-cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~-~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
+.... .....++||||+++++|.+++..... .....+++..++.++.||+.||.|||++||+||||||+|
T Consensus 107 ~~~~~---------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~N 177 (313)
T 3brb_A 107 EMSSQ---------GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARN 177 (313)
T ss_dssp C----------------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGG
T ss_pred ecccc---------CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcce
Confidence 64321 12346999999999999999965321 233569999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||++......... .......+++.|+|||++.+ ..++.++||||||++
T Consensus 178 Ili~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 238 (313)
T 3brb_A 178 CMLRDD-------MTVCVADFGLSKKIYSGDYY--------RQGRIAKMPVKWIAIESLAD----RVYTSKSDVWAFGVT 238 (313)
T ss_dssp EEECTT-------SCEEECSCSCC------------------------CCGGGSCHHHHHS----SCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEeecCcceeccccccc--------CcccccCCCccccCchhhcC----CCccchhhhHHHHHH
Confidence 999887 78999999999765432111 11223457889999999876 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|+|++ |..||.+....+....+..+..+..+. ..++.+.+++.+||+.||.
T Consensus 239 l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~ 291 (313)
T 3brb_A 239 MWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPE---------------------------DCLDELYEIMYSCWRTDPL 291 (313)
T ss_dssp HHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBT---------------------------TCCHHHHHHHHHTTCSSGG
T ss_pred HHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCc---------------------------cccHHHHHHHHHHcCCChh
Confidence 999999 899998877766666665544332211 4456799999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001142 1119 ERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~ 1133 (1142)
+|||+.++++++...
T Consensus 292 ~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 292 DRPTFSVLRLQLEKL 306 (313)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999998764
No 180
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=7.6e-37 Score=341.40 Aligned_cols=266 Identities=17% Similarity=0.187 Sum_probs=202.7
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~ 883 (1142)
.+|++.+.||+|+||.||+|.+ .+..+|+|+..... ..+.+ .+|+.+++++ +|+|++++++++.+..
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~----~~e~~~~~~l~~~~~i~~~~~~~~~~~ 79 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS------DAPQL----RDEYRTYKLLAGCTGIPNVYYFGQEGL 79 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT------TSCCH----HHHHHHHHHTTTCTTCCCEEEEEEETT
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC------ccHHH----HHHHHHHHHHhcCCCCCeEEeecCCCc
Confidence 4699999999999999999996 57788888754221 11223 6899999999 7999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++||||+ +++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 80 --------------~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~ 140 (298)
T 1csn_A 80 --------------HNVLVIDLL-GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIG 140 (298)
T ss_dssp --------------EEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC
T ss_pred --------------eeEEEEEec-CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec
Confidence 459999999 89999999862 24699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.++. .....+||+|||++........... ..........||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 141 ~~~~--~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el 211 (298)
T 1csn_A 141 RPNS--KNANMIYVVDFGMVKFYRDPVTKQH---IPYREKKNLSGTARYMSINTHLG----REQSRRDDLEALGHVFMYF 211 (298)
T ss_dssp CSSS--TTTTCEEECCCTTCEESBCTTTCCB---CCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHHHHH
T ss_pred cCCC--CCCCeEEEEECcccccccccccccc---ccccCccCCCCCcccCCchhhcC----CCCChHHHHHHHHHHHHHH
Confidence 7621 1224599999999987654321110 01112345579999999999876 5688999999999999999
Q ss_pred HhCCCCCCCCC---HHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1044 LTLQVPYMGLS---ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1044 LtG~~Pf~~~~---~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
++|+.||.+.. ..+....+.....+.... ......++.+.+++.+||+.||++|
T Consensus 212 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~~R 268 (298)
T 1csn_A 212 LRGSLPWQGLKAATNKQKYERIGEKKQSTPLR-----------------------ELCAGFPEEFYKYMHYARNLAFDAT 268 (298)
T ss_dssp HHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHH-----------------------HHTTTSCHHHHHHHHHHHHCCTTCC
T ss_pred HcCCCCcchhhccccHHHHHHHHhhccCccHH-----------------------HHHhhCcHHHHHHHHHHhcCCcccC
Confidence 99999998642 333333332211100000 0011456779999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 001142 1121 PTAGDLYEMFVAR 1133 (1142)
Q Consensus 1121 PSa~EVL~~L~~~ 1133 (1142)
||+++|++.+...
T Consensus 269 P~~~~l~~~l~~~ 281 (298)
T 1csn_A 269 PDYDYLQGLFSKV 281 (298)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 9999999887654
No 181
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4e-38 Score=360.83 Aligned_cols=251 Identities=22% Similarity=0.267 Sum_probs=198.7
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCC----hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSS----ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~----~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
.+|++.+.||+|+||.||+|.+ .+..+|+|+......... ......+ .+|+.++++++||||+++++++.
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~----~~E~~~l~~l~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKV----TLEIAILSRVEHANIIKVLDIFE 99 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEE----EHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHH----HHHHHHHHhCCCCCEeeEEEEEe
Confidence 4699999999999999999987 466788887654322111 0122233 68999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCC-CHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGG-SVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~gg-SL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
+.+ ..++||||+.+| +|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|
T Consensus 100 ~~~--------------~~~lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N 160 (335)
T 3dls_A 100 NQG--------------FFQLVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDEN 160 (335)
T ss_dssp CSS--------------EEEEEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred eCC--------------EEEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHH
Confidence 655 349999999766 99999875 3469999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||++....... ......||+.|+|||++.+ ...++.++|||||||+
T Consensus 161 Ill~~~-------~~~kL~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~i 219 (335)
T 3dls_A 161 IVIAED-------FTIKLIDFGSAAYLERGK-----------LFYTFCGTIEYCAPEVLMG---NPYRGPELEMWSLGVT 219 (335)
T ss_dssp EEECTT-------SCEEECCCTTCEECCTTC-----------CBCEECSCGGGCCHHHHTT---CCBCSHHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEeecccceECCCCC-----------ceeccCCCccccChhhhcC---CCCCCCcccchhHHHH
Confidence 999887 789999999997654321 1123469999999999876 2234789999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|+|++|..||..... .+..... . ....++.+.+|+.+||+.||.+
T Consensus 220 l~el~~g~~pf~~~~~-----~~~~~~~--------------------------~---~~~~~~~l~~li~~~L~~dP~~ 265 (335)
T 3dls_A 220 LYTLVFEENPFCELEE-----TVEAAIH--------------------------P---PYLVSKELMSLVSGLLQPVPER 265 (335)
T ss_dssp HHHHHHSSCSCSSGGG-----GTTTCCC--------------------------C---SSCCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHhCCCchhhHHH-----HHhhccC--------------------------C---CcccCHHHHHHHHHHccCChhh
Confidence 9999999999975211 0000000 0 0134567999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001142 1120 RPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~s 1135 (1142)
|||+.++++|+|+...
T Consensus 266 Rps~~ell~hp~~~~~ 281 (335)
T 3dls_A 266 RTTLEKLVTDPWVTQP 281 (335)
T ss_dssp SCCHHHHHHCTTTTCC
T ss_pred CcCHHHHhcCccccCC
Confidence 9999999999998753
No 182
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=4.8e-37 Score=350.49 Aligned_cols=261 Identities=23% Similarity=0.370 Sum_probs=206.7
Q ss_pred CCCcceeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 875 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~---------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 875 (1142)
.++|++.+.||+|+||.||+|++. +..+|+|+.. .. ......+.+ .+|+.+++++ +||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~~----~~E~~~l~~l~~hp~iv~~ 106 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DD-ATEKDLSDL----VSEMEMMKMIGKHKNIINL 106 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECC--TT-CCHHHHHHH----HHHHHHHHHHCCCTTBCCE
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeec--cC-CcHHHHHHH----HHHHHHHHHhhcCCCEeeE
Confidence 467999999999999999999973 3457777643 21 223333344 7999999999 89999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 944 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----------~~~~ls~~~i~~Ia~qIa~gL~y 944 (1142)
++++.+.+.. ++||||+++++|.+++...... ....+++..++.++.||+.||.|
T Consensus 107 ~~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 172 (334)
T 2pvf_A 107 LGACTQDGPL--------------YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172 (334)
T ss_dssp EEEECSSSCC--------------EEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEccCCce--------------EEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 9999865543 9999999999999999753211 12348999999999999999999
Q ss_pred HHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 945 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 945 LHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
||++||+||||||+|||++.+ +.+||+|||++.......... ......+|+.|+|||++.+
T Consensus 173 LH~~~ivH~Dlkp~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~---- 233 (334)
T 2pvf_A 173 LASQKCIHRDLAARNVLVTEN-------NVMKIADFGLARDINNIDYYK--------KTTNGRLPVKWMAPEALFD---- 233 (334)
T ss_dssp HHHTTEECSCCSGGGEEECTT-------CCEEECCCTTCEECTTTSSEE--------CCSCCCCCGGGCCHHHHHH----
T ss_pred HHhCCeeCCCCccceEEEcCC-------CCEEEcccccccccccccccc--------ccCCCCcccceeChHHhcC----
Confidence 999999999999999999877 789999999997654322110 1123357889999999876
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHH
Q 001142 1025 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1103 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1142)
..++.++||||||+++|+|++ |..||.+....++...+..+..+..+. ..+.
T Consensus 234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 286 (334)
T 2pvf_A 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------------------------NCTN 286 (334)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCT---------------------------TCCH
T ss_pred CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCc---------------------------cCCH
Confidence 467899999999999999999 999999888777776665544332211 4456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1104 FLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1104 ~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.+.+++.+||+.||.+|||+.|+++++...
T Consensus 287 ~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 287 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 799999999999999999999999988754
No 183
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.6e-37 Score=349.21 Aligned_cols=285 Identities=20% Similarity=0.221 Sum_probs=205.4
Q ss_pred CCCcceeeeecccCceEEEEEEE---CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCC------Ccccee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF---GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS------CIVEMY 876 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~---~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp------NIVkl~ 876 (1142)
..+|++.+.||+|+||.||+|.+ .+..+|+|+... .....+. +.+|+.+++.++|+ +|++++
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~-----~~~~~~~----~~~e~~~l~~l~~~~~~~~~~i~~~~ 83 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN-----VDRYCEA----ARSEIQVLEHLNTTDPNSTFRCVQML 83 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS-----SHHHHHH----HHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec-----CCchhHH----HHHHHHHHHHhhhcCCCCceeeEeee
Confidence 35799999999999999999987 456788888531 1222233 37899998888655 499999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001142 877 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 956 (1142)
Q Consensus 877 g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLK 956 (1142)
+++...+ +.++||||+ +++|.+++.. .+...+++..+..++.||+.||+|||++||+|||||
T Consensus 84 ~~~~~~~--------------~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk 145 (339)
T 1z57_A 84 EWFEHHG--------------HICIVFELL-GLSTYDFIKE---NGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLK 145 (339)
T ss_dssp EEEEETT--------------EEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred cccccCC--------------cEEEEEcCC-CCCHHHHHHh---cCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence 9988655 459999999 7999999976 233468999999999999999999999999999999
Q ss_pred CCCeeecccccc------------CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 957 SENILIDLERKK------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 957 p~NILld~~~~~------------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
|+|||++..... ....+.+||+|||.+...... .....||+.|+|||++.+
T Consensus 146 p~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~---- 208 (339)
T 1z57_A 146 PENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-------------HSTLVSTRHYRAPEVILA---- 208 (339)
T ss_dssp GGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-------------CCSSCSCGGGCCHHHHTT----
T ss_pred HHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc-------------cccccCCccccChHHhhC----
Confidence 999999763100 000267999999999753321 123468999999999876
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccccc---cc------------ccccC
Q 001142 1025 NLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE---HE------------VAQSG 1089 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~---~~------------~~~~~ 1089 (1142)
..++.++|||||||++|||++|..||...+..+....+.....+.............. .. .....
T Consensus 209 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T 1z57_A 209 LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC 288 (339)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHC
T ss_pred CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcC
Confidence 5688999999999999999999999998777665554433222111111110000000 00 00000
Q ss_pred CCC-CCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1090 SGF-EKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1090 ~~~-~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
... .........++.+.+|+.+||+.||.+|||+.|+++|+|+..
T Consensus 289 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 334 (339)
T 1z57_A 289 KPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL 334 (339)
T ss_dssp CCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred cchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence 000 000011245778999999999999999999999999999975
No 184
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.4e-37 Score=357.79 Aligned_cols=283 Identities=19% Similarity=0.186 Sum_probs=205.2
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|.+.+.||+|+||.||+|.+. +..+|+|+.. .........+. +.+|+.++++++||||+++++++.....
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~--~~~~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~ 115 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS--RPFQSEIFAKR----AYRELLLLKHMQHENVIGLLDVFTPASS 115 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC--STTSSHHHHHH----HHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEec--ccccchhHHHH----HHHHHHHHHhcCCCCchhhhhheeccCC
Confidence 47999999999999999999984 6677888754 22223333333 4799999999999999999999986543
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ......++||||+. ++|.+++. ..+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 116 ~--------~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~ 179 (371)
T 4exu_A 116 L--------RNFYDFYLVMPFMQ-TDLQKIMG-------MEFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE 179 (371)
T ss_dssp S--------TTCCCCEEEEECCC-EEHHHHTT-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred c--------ccceeEEEEEcccc-ccHHHHhh-------cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECC
Confidence 2 12334599999997 78887763 34999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++..... .....||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 180 ~-------~~~kL~Dfg~a~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el~ 236 (371)
T 4exu_A 180 D-------CELKILDFGLARHADAE-------------MTGYVVTRWYRAPEVILS---WMHYNQTVDIWSVGCIMAEML 236 (371)
T ss_dssp T-------CCEEECSTTCC---------------------CTTCCCTTSCHHHHSC---CSCCCTTHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEecCcccccccC-------------cCCcccCccccCHHHhcC---CCCCCcHHhHHHHHHHHHHHH
Confidence 7 78999999999754321 123468999999999875 246789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccC---CCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSG---SGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||.+.+..+....+........................+.. ............++.+.+||.+||+.||.+||
T Consensus 237 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 316 (371)
T 4exu_A 237 TGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRL 316 (371)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSC
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcC
Confidence 999999988777666555322111111111100000000000000 00000111124567899999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001142 1122 TAGDLYEMFVART 1134 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ 1134 (1142)
|+.|+++|+|+..
T Consensus 317 t~~ell~hp~f~~ 329 (371)
T 4exu_A 317 TAAQALTHPFFEP 329 (371)
T ss_dssp CHHHHHTSGGGTT
T ss_pred CHHHHhcCccccc
Confidence 9999999999974
No 185
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=4.8e-37 Score=343.12 Aligned_cols=256 Identities=21% Similarity=0.320 Sum_probs=202.4
Q ss_pred CCCcceee-eecccCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 806 FPSLSSCD-EAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~-~LG~GsfG~Vy~a~~----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
..+|++.+ .||+|+||+||+|.+ .+..+|+|+.... .......+. +.+|+.++++++||||+++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE--ANDPALKDE----LLAEANVMQQLDNPYIVRMIGICE 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHHH----HHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccc--ccCHHHHHH----HHHHHHHHHhCCCCCEEEEEEEEC
Confidence 45688888 999999999999965 2456788875432 112222333 489999999999999999999984
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
. + ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~-~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Ni 148 (291)
T 1xbb_A 89 A-E--------------SWMLVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 148 (291)
T ss_dssp S-S--------------SEEEEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred C-C--------------CcEEEEEeCCCCCHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceE
Confidence 3 2 24899999999999999986 34689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||++........... ......+|+.|+|||++.+ ..++.++||||||+++
T Consensus 149 l~~~~-------~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 210 (291)
T 1xbb_A 149 LLVTQ-------HYAKISDFGLSKALRADENYYK-------AQTHGKWPVKWYAPECINY----YKFSSKSDVWSFGVLM 210 (291)
T ss_dssp EEEET-------TEEEECCCTTCEECCTTCSEEE-------C----CCCGGGCCHHHHHH----CEEEHHHHHHHHHHHH
T ss_pred EEeCC-------CcEEEccCCcceeeccCCCccc-------ccccCCCCceeeChHHhcc----CCCChhhhHHHHHHHH
Confidence 99887 7899999999976543221100 1112346788999999876 4578999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+|++ |+.||.+....+....+..+..+..+. ..++.+.+++.+||+.||.+
T Consensus 211 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~~ 263 (291)
T 1xbb_A 211 WEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA---------------------------GCPREMYDLMNLCWTYDVEN 263 (291)
T ss_dssp HHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhh
Confidence 99999 999999888777777766554332221 44567999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001142 1120 RPTAGDLYEMFVA 1132 (1142)
Q Consensus 1120 RPSa~EVL~~L~~ 1132 (1142)
|||+.++++.+..
T Consensus 264 Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 264 RPGFAAVELRLRN 276 (291)
T ss_dssp SCCHHHHHHHHHH
T ss_pred CcCHHHHHHHHHH
Confidence 9999999987754
No 186
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=3e-38 Score=358.18 Aligned_cols=270 Identities=23% Similarity=0.292 Sum_probs=203.9
Q ss_pred CCCCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
...+|++.+.||+|+||.||+|++. +..+|+|+.... .....+.+ .+|+.++++++||||+++++++.+.+
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE----SSQGIEEF----ETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC----CSSHHHHH----HHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc----ChHHHHHH----HHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 4567999999999999999999974 677888864322 12223344 79999999999999999999987655
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .++||||+++++|.+++... ......+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 109 ~--------------~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~ 173 (321)
T 2qkw_B 109 E--------------MILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD 173 (321)
T ss_dssp C--------------CEEEEECCTTCBTGGGSSSS-CCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC
T ss_pred e--------------EEEEEEcCCCCcHHHHHhcc-CCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC
Confidence 3 39999999999999988642 11224689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||++......... .......||+.|+|||++.+ ..++.++||||||+++|||
T Consensus 174 ~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el 234 (321)
T 2qkw_B 174 EN-------FVPKITDFGISKKGTELDQT--------HLSTVVKGTLGYIDPEYFIK----GRLTEKSDVYSFGVVLFEV 234 (321)
T ss_dssp TT-------CCEEECCCTTCEECSSSSCC--------CCBCCCEEETTTCCHHHHHH----CBCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeccccccccccccc--------ccccccCCCccccCHHHhcC----CCCCcccchHhHHHHHHHH
Confidence 77 78999999999754322111 11123458999999999876 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHH-------HHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1044 LTLQVPYMGLSELEIHD-------LIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~-------~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
++|+.||.+....+... ....+.... ..... .........+..+.+++.+||+.|
T Consensus 235 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~---~~~~~~~~~~~~l~~li~~~l~~d 296 (321)
T 2qkw_B 235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLEQ---------------IVDPN---LADKIRPESLRKFGDTAVKCLALS 296 (321)
T ss_dssp HHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCS---------------SSSSS---CTTCSCHHHHHHHHHHHHHHTCSS
T ss_pred HhCCCcccccCcHHHHHHHHHhhhccccccHHH---------------hcChh---hccccCHHHHHHHHHHHHHHcCCC
Confidence 99999997543221110 000000000 00000 001112367788999999999999
Q ss_pred CCCCCCHHHHHHHHHhhc
Q 001142 1117 PTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~~ 1134 (1142)
|++|||+.|++++++...
T Consensus 297 P~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 297 SEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp GGGSCCHHHHHHHHHHHH
T ss_pred cccCcCHHHHHHHHHHHh
Confidence 999999999999998654
No 187
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.9e-37 Score=354.67 Aligned_cols=294 Identities=16% Similarity=0.168 Sum_probs=206.3
Q ss_pred CCcceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCCh---HHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSA---DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~---~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.+|++.+.||+|+||.||+|.+ .+..+|+|+.......... .........+.+|+.++++++||||+++++++...
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 101 (362)
T 3pg1_A 22 SPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHF 101 (362)
T ss_dssp CSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEEC
T ss_pred cceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEec
Confidence 5799999999999999999987 5677888876433221110 11112223458999999999999999999998653
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
.. ......++||||++ ++|.+++.. ....+++..+..|+.||+.||.|||++||+||||||+|||+
T Consensus 102 ~~---------~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~ 167 (362)
T 3pg1_A 102 EE---------PAMHKLYLVTELMR-TDLAQVIHD----QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL 167 (362)
T ss_dssp CT---------TTCCEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred cC---------CCcceEEEEEccCC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE
Confidence 21 12336799999998 788888864 23469999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||++....... ......||+.|+|||++.+ ...++.++|||||||++|+
T Consensus 168 ~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~ 226 (362)
T 3pg1_A 168 ADN-------NDITICDFNLAREDTADA-----------NKTHYVTHRWYRAPELVMQ---FKGFTKLVDMWSAGCVMAE 226 (362)
T ss_dssp CTT-------CCEEECCTTC--------------------------CGGGCCHHHHTT---CTTCCTHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEEecCccccccccc-----------ccceecccceecCcHHhcC---CCCCCcHhHHHhHHHHHHH
Confidence 877 789999999997433211 1123468999999999875 2457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCC---CCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGF---EKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
|++|+.||.+....+....+ .....+........................ .........++.+.+|+.+||+.||.
T Consensus 227 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 306 (362)
T 3pg1_A 227 MFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQ 306 (362)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGG
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChh
Confidence 99999999988777666555 323333322111000000000000000000 00111124567799999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001142 1119 ERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~s 1135 (1142)
+|||+.|+++|+|++.-
T Consensus 307 ~Rpt~~ell~hp~f~~~ 323 (362)
T 3pg1_A 307 RRISTEQALRHPYFESL 323 (362)
T ss_dssp GSCCHHHHHTSGGGTTT
T ss_pred hCCCHHHHHcCchhhhc
Confidence 99999999999999854
No 188
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.7e-37 Score=346.07 Aligned_cols=267 Identities=25% Similarity=0.406 Sum_probs=199.2
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
....+.+|++.+.||+|+||.||+|.+ .+..+|+|+...... ......+.+ .+|+.++++++||||+++++++
T Consensus 27 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~----~~E~~~l~~l~h~~i~~~~~~~ 101 (310)
T 2wqm_A 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDL-MDAKARADC----IKEIDLLKQLNHPNVIKYYASF 101 (310)
T ss_dssp TTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSS-CCHHHHHHH----HHHHHHHHTCCCTTBCCEEEEE
T ss_pred ccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhc-cCHHHHHHH----HHHHHHHHhCCCCCEeeEEEEE
Confidence 445677899999999999999999997 467788887643221 222333334 7999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
...+ ..++||||+++++|.+++..... ....+++..+..++.||+.||.|||++||+||||||+|
T Consensus 102 ~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~N 166 (310)
T 2wqm_A 102 IEDN--------------ELNIVLELADAGDLSRMIKHFKK-QKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPAN 166 (310)
T ss_dssp EETT--------------EEEEEEECCCSCBHHHHHHHHHH-TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred EcCC--------------cEEEEEecCCCCCHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHH
Confidence 8654 34999999999999999976433 23568999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
|+++.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||++
T Consensus 167 Il~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~i 225 (310)
T 2wqm_A 167 VFITAT-------GVVKLGDLGLGRFFSSKTT----------AAHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCL 225 (310)
T ss_dssp EEECTT-------SCEEECCC----------------------------CCSSCCHHHHTT----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEEeccceeeecCCCc----------cccccCCCeeEeChHHhCC----CCCCchhhHHHHHHH
Confidence 999877 7899999999875433211 1123468999999999875 568899999999999
Q ss_pred HHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1040 LLELLTLQVPYMGL--SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~--~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+|+|++|+.||.+. ........+.....+.... ...++.+.+++.+||+.||
T Consensus 226 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dp 279 (310)
T 2wqm_A 226 LYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS--------------------------DHYSEELRQLVNMCINPDP 279 (310)
T ss_dssp HHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCT--------------------------TTSCHHHHHHHHHHTCSSG
T ss_pred HHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcc--------------------------cccCHHHHHHHHHHcCCCh
Confidence 99999999999753 2233444444333222110 1445679999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001142 1118 TERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~s 1135 (1142)
.+|||+.+|++++.....
T Consensus 280 ~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 280 EKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp GGSCCHHHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHHHH
Confidence 999999999998877654
No 189
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=2.6e-37 Score=344.65 Aligned_cols=261 Identities=26% Similarity=0.325 Sum_probs=209.5
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|++ .+..+|+|+....... ....+.+ .+|+.++++++||||+++++++.+..
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTSTI----LREVELLKKLDHPNIMKLFEILEDSS- 94 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHHH----HHHHHHHHTCCCTTBCCEEEEEECSS-
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHHH----HHHHHHHHhccCCCccEEEEEEeCCC-
Confidence 4699999999999999999998 4677899886543221 1222333 78999999999999999999988654
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 95 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~ 156 (287)
T 2wei_A 95 -------------SFYIVGELYTGGELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156 (287)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESC
T ss_pred -------------eEEEEEEccCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEec
Confidence 35999999999999998875 246899999999999999999999999999999999999976
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
++ ....+||+|||++....... ......||+.|+|||++.+ .++.++||||||+++|+|+
T Consensus 157 ~~----~~~~~kL~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~-----~~~~~~Di~slG~~l~~l~ 216 (287)
T 2wei_A 157 KE----KDCDIKIIDFGLSTCFQQNT-----------KMKDRIGTAYYIAPEVLRG-----TYDEKCDVWSAGVILYILL 216 (287)
T ss_dssp SS----TTCCEEECSTTGGGTBCCCS-----------SCSCHHHHHTTCCHHHHTT-----CCCTHHHHHHHHHHHHHHH
T ss_pred CC----CcccEEEeccCcceeecCCC-----------ccccccCcccccChHHhcC-----CCCCchhhHhHHHHHHHHH
Confidence 42 12579999999987543321 1123458899999999864 4789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1045 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
+|..||.+....+....+..+........ ....++.+.+++.+||+.||.+|||+.
T Consensus 217 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ 272 (287)
T 2wei_A 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQ------------------------WRTISDDAKDLIRKMLTFHPSLRITAT 272 (287)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCSGG------------------------GTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCCchh------------------------hhhcCHHHHHHHHHHcccChhhCcCHH
Confidence 99999998877777766655443211100 014456799999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 001142 1125 DLYEMFVARTSS 1136 (1142)
Q Consensus 1125 EVL~~L~~~~ss 1136 (1142)
|+++|+|++...
T Consensus 273 ell~hp~~~~~~ 284 (287)
T 2wei_A 273 QCLEHPWIQKYS 284 (287)
T ss_dssp HHHHSHHHHHHC
T ss_pred HHhcCHHHhccc
Confidence 999999998644
No 190
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=2e-37 Score=351.52 Aligned_cols=274 Identities=21% Similarity=0.247 Sum_probs=203.1
Q ss_pred CCCcceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.++|++.+.||+|+||.||+|++ .+..+|+|+...... ..... .+.+|+.++++++||||+++++++.+...
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~~----~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 101 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT---QGGEL----QFQTEVEMISMAVHRNLLRLRGFCMTPTE 101 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CCC----HHHHHHHGGGTCCCTTBCCCCEEECCSSC
T ss_pred hhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC---chHHH----HHHHHHHHHHhccCCCccceEEEEecCCc
Confidence 46799999999999999999987 467789988543211 11111 23789999999999999999999986553
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCCCCee
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---HIMHRDIKSENIL 961 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~---gIvHrDLKp~NIL 961 (1142)
. ++||||+++++|.+++.... .....+++..+..|+.||+.||.|||++ ||+||||||+|||
T Consensus 102 ~--------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil 166 (326)
T 3uim_A 102 R--------------LLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANIL 166 (326)
T ss_dssp C--------------EEEEECCTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEE
T ss_pred e--------------EEEEEeccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEE
Confidence 3 89999999999999997522 2234599999999999999999999999 9999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||++......... ......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 167 ~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~ 226 (326)
T 3uim_A 167 LDEE-------FEAVVGDFGLAKLMDYKDTH---------VTTAVRGTIGHIAPEYLST----GKSSEKTDVFGYGVMLL 226 (326)
T ss_dssp ECTT-------CCEEECCCSSCEECCSSSSC---------EECCCCSCGGGCCHHHHHH----SEECHHHHHHHHHHHHH
T ss_pred ECCC-------CCEEeccCccccccCccccc---------ccccccCCcCccCHHHhcc----CCCCccccchhHHHHHH
Confidence 9887 78999999999765432111 1123458999999999876 45789999999999999
Q ss_pred HHHhCCCCCCCC-----CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1042 ELLTLQVPYMGL-----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1042 ELLtG~~Pf~~~-----~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
+|++|+.||... ........+........ .................+..+.+++.+||+.|
T Consensus 227 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 292 (326)
T 3uim_A 227 ELITGQRAFDLARLANDDDVMLLDWVKGLLKEKK--------------LEALVDVDLQGNYKDEEVEQLIQVALLCTQSS 292 (326)
T ss_dssp HHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCC--------------STTSSCTTCTTSCCHHHHHHHHHHHHHHTCSC
T ss_pred HHHhCCCcccccccccccchhHHHHHHHHhhchh--------------hhhhcChhhccccCHHHHHHHHHHHHHHhCcC
Confidence 999999999521 00001111111000000 00000000011122366788999999999999
Q ss_pred CCCCCCHHHHHHHHHhhcC
Q 001142 1117 PTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~~s 1135 (1142)
|.+|||+.||+++|+....
T Consensus 293 P~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 293 PMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp GGGSCCHHHHHHHHHTSSC
T ss_pred CccCCCHHHHHHHhcCcch
Confidence 9999999999999987543
No 191
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.8e-37 Score=350.03 Aligned_cols=271 Identities=22% Similarity=0.347 Sum_probs=209.2
Q ss_pred CCCCCCCCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCc
Q 001142 800 GLDPGSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI 872 (1142)
Q Consensus 800 ~~~~~~~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI 872 (1142)
.+......+|++.+.||+|+||.||+|++. +..+|+|+.. .. ........+ .+|+.++++++||||
T Consensus 23 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~~----~~E~~~l~~l~h~~i 95 (327)
T 2yfx_A 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP--EV-CSEQDELDF----LMEALIISKFNHQNI 95 (327)
T ss_dssp GSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECC--SS-CCHHHHHHH----HHHHHHHHHCCCTTB
T ss_pred hcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEec--cc-cchhhHHHH----HHHHHHHhhCCCCCC
Confidence 344455678999999999999999999852 3457888743 21 223333334 789999999999999
Q ss_pred cceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001142 873 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHI 950 (1142)
Q Consensus 873 Vkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~--~~~~ls~~~i~~Ia~qIa~gL~yLHs~gI 950 (1142)
+++++++.+.... ++||||+++++|.+++...... ....+++..+..++.||+.||.|||++||
T Consensus 96 v~~~~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i 161 (327)
T 2yfx_A 96 VRCIGVSLQSLPR--------------FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 161 (327)
T ss_dssp CCEEEEECSSSSC--------------EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEcCCCCc--------------EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe
Confidence 9999999865533 9999999999999999873221 11358999999999999999999999999
Q ss_pred cccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCch
Q 001142 951 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLE 1030 (1142)
Q Consensus 951 vHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~k 1030 (1142)
+||||||+|||++.++ ....+||+|||++......... .......||+.|+|||++.+ ..++.+
T Consensus 162 ~H~dlkp~NIli~~~~----~~~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~ 225 (327)
T 2yfx_A 162 IHRDIAARNCLLTCPG----PGRVAKIGDFGMARDIYRASYY--------RKGGCAMLPVKWMPPEAFME----GIFTSK 225 (327)
T ss_dssp CCSCCCGGGEEESCSS----TTCCEEECCCHHHHHHHC--------------CCGGGSCGGGCCHHHHHH----CCCCHH
T ss_pred ecCcCCHhHEEEecCC----CcceEEECcccccccccccccc--------ccCCCcCCCcceeCHhHhcC----CCCCch
Confidence 9999999999998541 1257999999999754332111 11223468899999999876 568899
Q ss_pred hhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHH
Q 001142 1031 VDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF 1109 (1142)
Q Consensus 1031 sDVwSLGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI 1109 (1142)
+||||||+++|+|++ |..||......+....+..+..+..+. ..++.+.+++
T Consensus 226 ~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li 278 (327)
T 2yfx_A 226 TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK---------------------------NCPGPVYRIM 278 (327)
T ss_dssp HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHH
Confidence 999999999999998 999999877777776665554332211 3456799999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1110 RRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1110 ~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
.+||+.||.+|||+.++++++|...
T Consensus 279 ~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 279 TQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhcCChhhCcCHHHHHHHHHHHh
Confidence 9999999999999999999999764
No 192
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.2e-38 Score=370.65 Aligned_cols=270 Identities=14% Similarity=0.125 Sum_probs=191.6
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHH---HHHhhCCCCCcccee----
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEV---RMLGALRHSCIVEMY---- 876 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei---~iL~~L~HpNIVkl~---- 876 (1142)
..+|++.+.||+|+||.||+|++ .+..+|+|+....... .....+.+ .+|+ .++++++|||||+++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~~----~~E~~~l~~l~~l~hpniv~~~~~~~ 146 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQM----KEEVLRLRLLRGIKNQKQAKVHLRFI 146 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHHH----HHHHHGGGGSTTCCSHHHHHHHHCBC
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHHH----HHHHHHHHhccccCCHHHHHHHhhhh
Confidence 35799999999999999999996 4778999987543221 22233334 7899 455556799999999
Q ss_pred ---eeEecCCCCC---CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001142 877 ---GHKISSKWLP---SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG--EKHVSVKLALFIAQDVAAALVELHSK 948 (1142)
Q Consensus 877 ---g~~~~~~~~~---~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~--~~~ls~~~i~~Ia~qIa~gL~yLHs~ 948 (1142)
+++.+.+... ...+.........++||||+ +|+|.+++....... ...+++..+..|+.||+.||+|||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 225 (377)
T 3byv_A 147 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 225 (377)
T ss_dssp CCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 5544332100 00000111122468999999 589999998632211 12345688889999999999999999
Q ss_pred CccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc------
Q 001142 949 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH------ 1022 (1142)
Q Consensus 949 gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------ 1022 (1142)
||+||||||+|||++.+ +.+||+|||+++...... ....| +.|+|||++.+..
T Consensus 226 ~ivHrDikp~NIll~~~-------~~~kL~DFG~a~~~~~~~-------------~~~~g-~~y~aPE~~~~~~~~~~~~ 284 (377)
T 3byv_A 226 GLVHTYLRPVDIVLDQR-------GGVFLTGFEHLVRDGARV-------------VSSVS-RGFEPPELEARRATISYHR 284 (377)
T ss_dssp TEECSCCCGGGEEECTT-------CCEEECCGGGCEETTCEE-------------ECCCC-TTCCCHHHHHHHTSTHHHH
T ss_pred CeecCCCCHHHEEEcCC-------CCEEEEechhheecCCcc-------------cCCCC-cCccChhhhcccccccccc
Confidence 99999999999999977 789999999997533211 13357 8999999998620
Q ss_pred -CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhh
Q 001142 1023 -KPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET 1101 (1142)
Q Consensus 1023 -~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1142)
....++.++|||||||++|||++|+.||.+.........+.. .. ...
T Consensus 285 ~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~-----------------------~~---------~~~ 332 (377)
T 3byv_A 285 DRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFR-----------------------SC---------KNI 332 (377)
T ss_dssp CCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGS-----------------------SC---------CCC
T ss_pred cccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhh-----------------------hc---------cCC
Confidence 001688999999999999999999999975432211111100 00 144
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1102 LSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1102 ~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
++.+.+|+.+||+.||++|||+.|+++|+|+..
T Consensus 333 ~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 365 (377)
T 3byv_A 333 PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365 (377)
T ss_dssp CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence 567999999999999999999999999999874
No 193
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.8e-37 Score=367.20 Aligned_cols=256 Identities=26% Similarity=0.369 Sum_probs=203.0
Q ss_pred CCCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
..+|++.++||+|+||.||+|.+.+ ..||+|+.+ ..... .+.+ .+|+.+|++++||||+++++++.+ .
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~--~~~~~---~~~~----~~E~~~l~~l~hp~iv~~~~~~~~-~- 251 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMS---PEAF----LQEAQVMKKLRHEKLVQLYAVVSE-E- 251 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECC--TTSSC---HHHH----HHHHHHHHHCCCTTBCCEEEEECS-S-
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEec--cCCCC---HHHH----HHHHHHHHhCCCCCEeeEEEEEcC-C-
Confidence 3568999999999999999999965 467887743 22211 2334 799999999999999999999864 2
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++|+|.++++... ...+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 252 -------------~~~iv~e~~~~gsL~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~ 315 (452)
T 1fmk_A 252 -------------PIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 315 (452)
T ss_dssp -------------SCEEEECCCTTCBHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred -------------ceEEEehhhcCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECC
Confidence 2389999999999999997521 235899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++........ ......+|+.|+|||++.. ..++.++|||||||++|||+
T Consensus 316 ~-------~~~kl~DfG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwslG~~l~el~ 375 (452)
T 1fmk_A 316 N-------LVCKVADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELT 375 (452)
T ss_dssp G-------GCEEECCCCTTC-----------------------CCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEECCCccceecCCCcee---------cccCCcccccccCHhHHhc----CCCCccccHHhHHHHHHHHH
Confidence 7 78999999999765432111 1123347888999999876 56889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |+.||.+....++...+..+..+..+. .+++.+.+++.+||+.||++|||+
T Consensus 376 t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~Rpt~ 428 (452)
T 1fmk_A 376 TKGRVPYPGMVNREVLDQVERGYRMPCPP---------------------------ECPESLHDLMCQCWRKEPEERPTF 428 (452)
T ss_dssp TTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhhCcCH
Confidence 9 999999888877777776554332211 455679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
+++++.+.....
T Consensus 429 ~~l~~~L~~~~~ 440 (452)
T 1fmk_A 429 EYLQAFLEDYFT 440 (452)
T ss_dssp HHHHHHHHTTTS
T ss_pred HHHHHHHHHHhc
Confidence 999998876543
No 194
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=8.3e-38 Score=349.65 Aligned_cols=277 Identities=23% Similarity=0.351 Sum_probs=192.9
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
...+|++.+.||+|+||.||+|.+ .+..+|+|+...... ....+. +.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~ 85 (303)
T 2vwi_A 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC---QTSMDE----LLKEIQAMSQCHHPNIVSYYTSFVVK 85 (303)
T ss_dssp CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------------CCCCCCCTTBCCEEEEEESS
T ss_pred chhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc---chhHHH----HHHHHHHHhhcCCCCEeeEEEEEeec
Confidence 356899999999999999999987 466778776432211 112223 37899999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~---~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
+. .++||||+++++|.+++...... ....+++..+..++.||+.||.|||++||+||||||+|
T Consensus 86 ~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~N 151 (303)
T 2vwi_A 86 DE--------------LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 151 (303)
T ss_dssp SC--------------EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred CC--------------cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhh
Confidence 53 49999999999999999764322 23468999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
|+++.+ +.+||+|||++.......... .........||+.|+|||++.+. ..++.++||||||++
T Consensus 152 il~~~~-------~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG~i 216 (303)
T 2vwi_A 152 ILLGED-------GSVQIADFGVSAFLATGGDIT-----RNKVRKTFVGTPCWMAPEVMEQV---RGYDFKADIWSFGIT 216 (303)
T ss_dssp EEECTT-------CCEEECCCHHHHHCC--------------------CCCTTCCHHHHHHH---HCCCTHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEEeccchheeccCCCcc-----chhhhcccCCCccccCHHHhccc---cCCCchhhHHHHHHH
Confidence 999877 789999999987654321110 00112245699999999998642 347899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
+|+|++|+.||.................+........ .......++.+.+++.+||+.||.+
T Consensus 217 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~dp~~ 278 (303)
T 2vwi_A 217 AIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD------------------KEMLKKYGKSFRKMISLCLQKDPEK 278 (303)
T ss_dssp HHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----------------------CCCCCCCHHHHHHHHHHCCSSGGG
T ss_pred HHHHHhCCCCCccCchhhHHHHHhccCCCcccccccc------------------chhhhhhhHHHHHHHHHHccCChhh
Confidence 9999999999987665554433333332222111100 0000144567999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001142 1120 RPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~s 1135 (1142)
|||+.++++|+|+...
T Consensus 279 Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 279 RPTAAELLRHKFFQKA 294 (303)
T ss_dssp SCCHHHHHTSTTC---
T ss_pred CcCHHHHhhChhhhcC
Confidence 9999999999999754
No 195
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-36 Score=345.47 Aligned_cols=267 Identities=24% Similarity=0.364 Sum_probs=195.7
Q ss_pred CCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC--CCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL--RHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L--~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.++||+|+||.||+|++.+..+|+|+.... . ...+ .+|.+++..+ +||||+++++++.....
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~------~-~~~~----~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT------E-EASW----FRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGG------G-HHHH----HHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cceEEEeEeecCCCeEEEEEEECCceEEEEEEecc------c-cchh----hhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 46999999999999999999999999999986422 1 1112 3566666554 89999999999876421
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------CccccCCC
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------HIMHRDIK 956 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~--------gIvHrDLK 956 (1142)
.....++||||+++++|.++++. ..+++..+..++.|++.||.|||++ ||+|||||
T Consensus 106 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dik 169 (337)
T 3mdy_A 106 ----------SWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169 (337)
T ss_dssp ----------GGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCC
T ss_pred ----------CCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccc
Confidence 12356999999999999999976 3599999999999999999999998 99999999
Q ss_pred CCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC--CCchhhHH
Q 001142 957 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL--YGLEVDIW 1034 (1142)
Q Consensus 957 p~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~--~s~ksDVw 1034 (1142)
|+|||++.+ +.+||+|||+++......... ........||+.|+|||++.+...... ++.++|||
T Consensus 170 p~Nill~~~-------~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw 236 (337)
T 3mdy_A 170 SKNILVKKN-------GTCCIADLGLAVKFISDTNEV------DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMY 236 (337)
T ss_dssp GGGEEECTT-------SCEEECCCTTCEECC---------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHH
T ss_pred hHHEEECCC-------CCEEEEeCCCceeeccccccc------cCCCCCCccCcceeChhhcccccCCccccCccccchH
Confidence 999999877 789999999997654322110 011224579999999999876221111 11249999
Q ss_pred HHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHH-hCCCCCchhHHhhhcccccccccccCCCCCCchhh
Q 001142 1035 SYGCLLLELLTL----------QVPYMGLS-----ELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1098 (1142)
Q Consensus 1035 SLGviL~ELLtG----------~~Pf~~~~-----~~el~~~I~-~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1142)
||||++|||++| +.||.... .......+. ....+..+.. ...
T Consensus 237 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~ 294 (337)
T 3mdy_A 237 SFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNR----------------------WSS 294 (337)
T ss_dssp HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG----------------------GGG
T ss_pred HHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCcccccc----------------------chh
Confidence 999999999999 66665321 112222221 1111111111 111
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1099 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1099 ~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
..+++.+.+|+.+||+.||.+|||+.||++++.....
T Consensus 295 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 295 DECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp SHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 2677889999999999999999999999999887643
No 196
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=6.6e-37 Score=342.88 Aligned_cols=279 Identities=23% Similarity=0.334 Sum_probs=200.4
Q ss_pred CCCCCCC--CcceeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCc
Q 001142 801 LDPGSFP--SLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI 872 (1142)
Q Consensus 801 ~~~~~~~--~y~l~~~LG~GsfG~Vy~a~~------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI 872 (1142)
+++..+. .|++.+.||+|+||.||+|++ .+..+|+|+..... .....+. +.+|+.++++++||||
T Consensus 13 ~~~~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~----~~~E~~~l~~l~h~~i 85 (302)
T 4e5w_A 13 VDPTHFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIAD----LKKEIEILRNLYHENI 85 (302)
T ss_dssp CCTTBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHHH----HHHHHHHHHTCCCTTB
T ss_pred cChhhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc---cchhHHH----HHHHHHHHHhCCCCCe
Confidence 3444443 489999999999999999995 46778888864332 1112223 3799999999999999
Q ss_pred cceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001142 873 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMH 952 (1142)
Q Consensus 873 Vkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvH 952 (1142)
+++++++.+.+. ...++||||+++++|.+++... ...+++..+..++.||+.||+|||++||+|
T Consensus 86 ~~~~~~~~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H 149 (302)
T 4e5w_A 86 VKYKGICTEDGG------------NGIKLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLGSRQYVH 149 (302)
T ss_dssp CCEEEEEEC---------------CCEEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTTEEC
T ss_pred eeeeeEEecCCC------------ceEEEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhhcCCccc
Confidence 999999886421 1459999999999999999652 246899999999999999999999999999
Q ss_pred cCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhh
Q 001142 953 RDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVD 1032 (1142)
Q Consensus 953 rDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksD 1032 (1142)
|||||+|||++.+ +.+||+|||++.......... .......||..|+|||++.+ ..++.++|
T Consensus 150 ~dikp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~D 211 (302)
T 4e5w_A 150 RDLAARNVLVESE-------HQVKIGDFGLTKAIETDKEYY-------TVKDDRDSPVFWYAPECLMQ----SKFYIASD 211 (302)
T ss_dssp SCCSGGGEEEEET-------TEEEECCCTTCEECCTTCCEE-------ECCCCTTCCGGGCCHHHHHH----CEEEHHHH
T ss_pred CCCchheEEEcCC-------CCEEECcccccccccCCCcce-------eccCCCCCCccccCCeeecC----CCCCcchh
Confidence 9999999999887 789999999997654422110 11223468889999999876 46779999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001142 1033 IWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1112 (1142)
Q Consensus 1033 VwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~C 1112 (1142)
|||||+++|+|++|..|+.. .............. ........ .......... .....++.+.+++.+|
T Consensus 212 i~slG~il~~l~~g~~p~~~--~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~---~~~~~~~~l~~li~~~ 279 (302)
T 4e5w_A 212 VWSFGVTLHELLTYCDSDSS--PMALFLKMIGPTHG--QMTVTRLV-----NTLKEGKRLP---CPPNCPDEVYQLMRKC 279 (302)
T ss_dssp HHHHHHHHHHHHTTTCGGGS--HHHHHHHHHCSCCG--GGHHHHHH-----HHHHTTCCCC---CCTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHccCCCcc--hhhHHhhccCCccc--ccCHHHHH-----HHHhccCCCC---CCCCCCHHHHHHHHHH
Confidence 99999999999999998753 22111111111000 00000000 0000000000 1115567899999999
Q ss_pred cccCCCCCCCHHHHHHHHHh
Q 001142 1113 TEENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1113 L~~DP~~RPSa~EVL~~L~~ 1132 (1142)
|+.||.+|||+.++++.+..
T Consensus 280 l~~dp~~Rps~~~ll~~L~~ 299 (302)
T 4e5w_A 280 WEFQPSNRTSFQNLIEGFEA 299 (302)
T ss_dssp TCSSGGGSCCHHHHHHHHHH
T ss_pred cCCCCCCCCCHHHHHHHHHH
Confidence 99999999999999998764
No 197
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=5.3e-37 Score=340.08 Aligned_cols=253 Identities=24% Similarity=0.395 Sum_probs=202.9
Q ss_pred CCCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.++|++.+.||+|+||.||+|.+.+ ..+|+|+.... ... .+.+ .+|++++++++||||+++++++.+..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~---~~~~----~~E~~~l~~l~h~~i~~~~~~~~~~~- 81 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMS---PDAF----LAEANLMKQLQHQRLVRLYAVVTQEP- 81 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT--SSC---HHHH----HHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC--ccc---HHHH----HHHHHHHHhCCCcCcceEEEEEcCCC-
Confidence 3579999999999999999999854 46888875422 111 2233 78999999999999999999876322
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
.++||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 82 --------------~~~v~e~~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~ 144 (279)
T 1qpc_A 82 --------------IYIITEYMENGSLVDFLKTPS---GIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 144 (279)
T ss_dssp --------------CEEEEECCTTCBHHHHTTSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred --------------cEEEEecCCCCCHHHHHhcCC---CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcC
Confidence 389999999999999986421 125899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||.+......... ......+++.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 145 ~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~el~ 204 (279)
T 1qpc_A 145 T-------LSCKIADFGLARLIEDNEYT---------AREGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTEIV 204 (279)
T ss_dssp T-------SCEEECCCTTCEECSSSCEE---------CCTTCCCCTTTSCHHHHHH----CEECHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEECCCcccccccCcccc---------cccCCCCccCccChhhhcc----CCCCchhhhHHHHHHHHHHH
Confidence 7 78999999999765432211 1123357889999999875 46789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |+.||.+....+....+..+..+..+ ...++.+.+++.+||+.||++|||+
T Consensus 205 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~p~~Rps~ 257 (279)
T 1qpc_A 205 THGRIPYPGMTNPEVIQNLERGYRMVRP---------------------------DNCPEELYQLMRLCWKERPEDRPTF 257 (279)
T ss_dssp TTTCCSSTTCCHHHHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCcccCHHHHHHHHhcccCCCCc---------------------------ccccHHHHHHHHHHhccChhhCCCH
Confidence 9 99999987777776666544322211 1445679999999999999999999
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.++++.+..
T Consensus 258 ~~l~~~l~~ 266 (279)
T 1qpc_A 258 DYLRSVLED 266 (279)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987654
No 198
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.7e-37 Score=349.26 Aligned_cols=275 Identities=24% Similarity=0.358 Sum_probs=202.0
Q ss_pred CCCcceeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
-.+|++.+.||+|+||.||+|++ .+..+|+|+.... .....+.+ .+|+.++++++||||+++++++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~----~~E~~~l~~l~h~~i~~~~~~~ 93 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRDF----QREIQILKALHSDFIVKYRGVS 93 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHHH----HHHHHHHHTCCCTTBCCEEEEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHHH----HHHHHHHHhcCCCceeEEEEEE
Confidence 45799999999999999999995 4566788875322 23333334 8999999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
...+. ...++||||+++++|.+++... ...+++..+..|+.||+.||+|||++||+||||||+|
T Consensus 94 ~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~N 157 (327)
T 3lxl_A 94 YGPGR------------QSLRLVMEYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARN 157 (327)
T ss_dssp ECSSS------------CEEEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred ecCCC------------ceEEEEEeecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhh
Confidence 75321 2469999999999999999763 2358999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||++........... ......||+.|+|||++.+ ..++.++||||||++
T Consensus 158 Il~~~~-------~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 219 (327)
T 3lxl_A 158 ILVESE-------AHVKIADFGLAKLLPLDKDYYV-------VREPGQSPIFWYAPESLSD----NIFSRQSDVWSFGVV 219 (327)
T ss_dssp EEEEET-------TEEEECCGGGCEECCTTCSEEE-------CSSCCCSCGGGSCHHHHHH----CEEEHHHHHHHHHHH
T ss_pred EEECCC-------CCEEEcccccceecccCCccce-------eeccCCccccccCHHHhcc----CCCChHHhHHHHHHH
Confidence 999887 7899999999986543221110 1123458889999999876 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHH-hCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~-~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|+|++|+.||...... ...... ....+......... ...... ......++.+.+|+.+||+.||.
T Consensus 220 l~~ll~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~---~~~~~~~~~l~~li~~~l~~dP~ 286 (327)
T 3lxl_A 220 LYELFTYCDKSCSPSAE-FLRMMGCERDVPALSRLLELL---------EEGQRL---PAPPACPAEVHELMKLCWAPSPQ 286 (327)
T ss_dssp HHHHHTTTCGGGSHHHH-HHHHCC----CCHHHHHHHHH---------HTTCCC---CCCTTCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHhCCCCCccccch-hhhhcccccccccHHHHHHHh---------hcccCC---CCCCcccHHHHHHHHHHcCCChh
Confidence 99999999999753221 111110 00111000000000 000000 01125667899999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001142 1119 ERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~s 1135 (1142)
+|||+.|+++++.....
T Consensus 287 ~Rps~~ell~~L~~~~~ 303 (327)
T 3lxl_A 287 DRPSFSALGPQLDMLWS 303 (327)
T ss_dssp GSCCHHHHHHHHHHC--
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999998876533
No 199
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=4.5e-37 Score=360.73 Aligned_cols=291 Identities=20% Similarity=0.250 Sum_probs=186.8
Q ss_pred cce-eeeecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 809 LSS-CDEAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 809 y~l-~~~LG~GsfG~Vy~a~~~----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
|++ .++||+|+||+||+|++. +..+|+|+.. ..... .. +.+|+.++++++|||||++++++....
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~--~~~~~----~~----~~~E~~~l~~l~hpniv~~~~~~~~~~ 91 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE--GTGIS----MS----ACREIALLRELKHPNVISLQKVFLSHA 91 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECS--SSSCC----HH----HHHHHHHHHHCCCTTBCCCCEEEEETT
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEEC--CCCCC----HH----HHHHHHHHHhcCCCCeeeEeeEEecCC
Confidence 555 568999999999999964 5568888743 22111 12 368999999999999999999986532
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET----GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~----~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
. ...++||||++ ++|.+++...... ....+++..++.|+.||+.||.|||++||+||||||+|
T Consensus 92 ~------------~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~N 158 (405)
T 3rgf_A 92 D------------RKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPAN 158 (405)
T ss_dssp T------------TEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred C------------CeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHH
Confidence 1 25699999997 6898888653321 12358999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||+..+. ...+.+||+|||+|+........ ........||+.|+|||++.+ ...++.++|||||||+
T Consensus 159 Ill~~~~---~~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlG~i 225 (405)
T 3rgf_A 159 ILVMGEG---PERGRVKIADMGFARLFNSPLKP-------LADLDPVVVTFWYRAPELLLG---ARHYTKAIDIWAIGCI 225 (405)
T ss_dssp EEECCSS---TTTTCEEECCTTCCC-----------------------CCCTTCCHHHHTT---CCSCCHHHHHHHHHHH
T ss_pred eEEecCC---CCCCcEEEEECCCceecCCCCcc-------cccCCCceecCcccCchhhcC---CCcccchhhhHHHHHH
Confidence 9994320 11278999999999765432111 011224579999999999875 2358899999999999
Q ss_pred HHHHHhCCCCCCCCCHH---------HHHHHH-HhCCCCCchhHHhhhccccccc-cc-ccC-CCCCCch-------hhh
Q 001142 1040 LLELLTLQVPYMGLSEL---------EIHDLI-QMGKRPRLTDELEALGSCHEHE-VA-QSG-SGFEKPE-------AEL 1099 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~---------el~~~I-~~~~~p~l~~~l~~~~~~~~~~-~~-~~~-~~~~~~~-------~~~ 1099 (1142)
+|+|++|+.||.+.... +....+ .....+... .+.......... .. ... ..+.... ...
T Consensus 226 l~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (405)
T 3rgf_A 226 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADK-DWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKV 304 (405)
T ss_dssp HHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTT-TCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTC
T ss_pred HHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChh-hcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCC
Confidence 99999999999764431 222222 221111111 000000000000 00 000 0000000 000
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 001142 1100 ETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1100 ~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ss 1136 (1142)
..++.+.+||.+||+.||.+|||++|+++|+|+....
T Consensus 305 ~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 305 KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp CTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred CCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 1245689999999999999999999999999998653
No 200
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.3e-37 Score=348.52 Aligned_cols=262 Identities=23% Similarity=0.344 Sum_probs=203.1
Q ss_pred CCCCcceeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 876 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~-------~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~ 876 (1142)
...+|++.+.||+|+||.||+|.+.+ ..+|+|+.... ......+.+ .+|+.+++++ +||||++++
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~----~~E~~~l~~l~~h~~iv~~~ 116 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST---AHADEKEAL----MSELKIMSHLGQHENIVNLL 116 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT---CCHHHHHHH----HHHHHHHHHHCCCTTBCCEE
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc---cChHHHHHH----HHHHHHHHhhcCCCCeeeEE
Confidence 35679999999999999999999843 25777775322 122333334 7999999999 899999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc---------CCCCCCHHHHHHHHHHHHHHHHHHHh
Q 001142 877 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---------GEKHVSVKLALFIAQDVAAALVELHS 947 (1142)
Q Consensus 877 g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~---------~~~~ls~~~i~~Ia~qIa~gL~yLHs 947 (1142)
+++.+.+.. ++||||+++|+|.+++...... ....+++..+..++.||+.||.|||+
T Consensus 117 ~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 182 (333)
T 2i1m_A 117 GACTHGGPV--------------LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS 182 (333)
T ss_dssp EEECSSSSC--------------EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCce--------------EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence 999865543 9999999999999999764321 12458999999999999999999999
Q ss_pred CCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC
Q 001142 948 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1027 (1142)
Q Consensus 948 ~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1027 (1142)
+||+||||||+|||++.+ +.+||+|||++......... .......||+.|+|||++.+ ..+
T Consensus 183 ~~ivH~Dlkp~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~ 243 (333)
T 2i1m_A 183 KNCIHRDVAARNVLLTNG-------HVAKIGDFGLARDIMNDSNY--------IVKGNARLPVKWMAPESIFD----CVY 243 (333)
T ss_dssp TTEECSCCSGGGCEEEGG-------GEEEBCCCGGGCCGGGCTTS--------EECSSCEECGGGSCHHHHHH----CCC
T ss_pred CCcccCCcccceEEECCC-------CeEEECccccccccccccce--------eecCCCCCCccccCHHHhcc----CCC
Confidence 999999999999999887 78999999999765432111 01223457889999999876 568
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHH
Q 001142 1028 GLEVDIWSYGCLLLELLT-LQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1105 (1142)
Q Consensus 1028 s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1105 (1142)
+.++||||||+++|+|++ |..||.+....... ..+.....+..+ ...++.+
T Consensus 244 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l 296 (333)
T 2i1m_A 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP---------------------------AFAPKNI 296 (333)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCC---------------------------TTCCHHH
T ss_pred ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCC---------------------------CCCCHHH
Confidence 899999999999999998 99999875443332 333322221111 1345678
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1106 VDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1106 ~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.+++.+||+.||.+|||+.|+++++...
T Consensus 297 ~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 297 YSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 9999999999999999999999988754
No 201
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=342.57 Aligned_cols=264 Identities=25% Similarity=0.354 Sum_probs=199.3
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
+.+++|.....||+|+||.||+|.+. +..||+|+.... . ....+.+ .+|+.++++++||||+++++++..
T Consensus 19 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~--~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~ 90 (295)
T 2clq_A 19 YEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--D--SRYSQPL----HEEIALHKHLKHKNIVQYLGSFSE 90 (295)
T ss_dssp ECBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--C--C---HHH----HHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred ccccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--c--hHHHHHH----HHHHHHHHhCCCCCEeeEeeEEEe
Confidence 33455667779999999999999984 556777765422 1 1222333 789999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.+ ..++||||+++++|.+++... .....+++..+..++.||+.||.|||++||+||||||+||+
T Consensus 91 ~~--------------~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil 154 (295)
T 2clq_A 91 NG--------------FIKIFMEQVPGGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVL 154 (295)
T ss_dssp TT--------------EEEEEEECCSEEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred CC--------------cEEEEEEeCCCCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEE
Confidence 54 349999999999999999762 22345789999999999999999999999999999999999
Q ss_pred ecc-ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 962 IDL-ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 962 ld~-~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
++. + +.+||+|||.+........ ......||+.|+|||++.+.. ..++.++||||||+++
T Consensus 155 ~~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~--~~~~~~~Di~slG~il 215 (295)
T 2clq_A 155 INTYS-------GVLKISDFGTSKRLAGINP----------CTETFTGTLQYMAPEIIDKGP--RGYGKAADIWSLGCTI 215 (295)
T ss_dssp EETTT-------CCEEECCTTTCEESCC---------------CCCCCCGGGCCHHHHHHGG--GGCSHHHHHHHHHHHH
T ss_pred EECCC-------CCEEEeecccccccCCCCC----------cccccCCCccccChhhhcCCC--CCCCcHHHHHHHHHHH
Confidence 986 4 7899999999976543211 112346899999999987521 2378999999999999
Q ss_pred HHHHhCCCCCCCCCHHHH--HHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1041 LELLTLQVPYMGLSELEI--HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el--~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
|+|++|+.||........ .........+.++ ...++.+.+++.+||+.||+
T Consensus 216 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~dp~ 268 (295)
T 2clq_A 216 IEMATGKPPFYELGEPQAAMFKVGMFKVHPEIP---------------------------ESMSAEAKAFILKCFEPDPD 268 (295)
T ss_dssp HHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCC---------------------------TTSCHHHHHHHHHTTCSSTT
T ss_pred HHHHHCCCCccCCCchhHHHHhhcccccccccc---------------------------ccCCHHHHHHHHHHccCChh
Confidence 999999999975432221 1111111111111 14556799999999999999
Q ss_pred CCCCHHHHHHHHHhhcCCC
Q 001142 1119 ERPTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ss~ 1137 (1142)
+|||+.++++|+|++....
T Consensus 269 ~Rps~~~ll~~~~~~~~~~ 287 (295)
T 2clq_A 269 KRACANDLLVDEFLKVSSK 287 (295)
T ss_dssp TSCCHHHHHTSGGGCC---
T ss_pred hCCCHHHHhcChhhhhccc
Confidence 9999999999999986643
No 202
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.3e-37 Score=358.82 Aligned_cols=262 Identities=23% Similarity=0.344 Sum_probs=193.3
Q ss_pred CcceeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~---~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.|++.++||+|+||+||+|++. +..+.++++.++... .....+.+ .+|+.++++++||||+++++++...+.
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~----~~E~~il~~l~hpnIv~~~~~~~~~~~ 164 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQF----LTEGIIMKDFSHPNVLSLLGICLRSEG 164 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHH----HHHHTTSTTCCCTTBCCCCEEECCCSS
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHH----HHHHHHHHhCCCCCcceEEEEEEcCCC
Confidence 4789999999999999999873 233444444444322 22333444 799999999999999999998754321
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+++++|.++++. ....+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 165 -------------~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~ 227 (373)
T 3c1x_A 165 -------------SPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDE 227 (373)
T ss_dssp -------------CCEEEEECCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred -------------CeEEEEECCCCCCHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECC
Confidence 23899999999999999964 2346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++........ .........+|+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 228 ~-------~~~kL~DFG~a~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwSlG~il~ell 290 (373)
T 3c1x_A 228 K-------FTVKVADFGLARDMYDKEFD------SVHNKTGAKLPVKWMALESLQT----QKFTTKSDVWSFGVLLWELM 290 (373)
T ss_dssp T-------CCEEECCC---------------------------CCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeeccccccccccccc------cccccCCCCCcccccChHHhcC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 78999999999765332111 0011123457889999999876 56889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |.+||.+....+....+..+..+..+ ..+++.+.+++.+||+.||++|||+
T Consensus 291 t~~~~p~~~~~~~~~~~~~~~~~~~~~p---------------------------~~~~~~l~~li~~cl~~dp~~RPs~ 343 (373)
T 3c1x_A 291 TRGAPPYPDVNTFDITVYLLQGRRLLQP---------------------------EYCPDPLYEVMLKCWHPKAEMRPSF 343 (373)
T ss_dssp TTSCCSCTTSCSSCHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCcCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcCCChhhCcCH
Confidence 9 78888766555555555444332211 1345679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
.|+++++.....
T Consensus 344 ~ell~~L~~i~~ 355 (373)
T 3c1x_A 344 SELVSRISAIFS 355 (373)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999877543
No 203
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=7.3e-37 Score=355.19 Aligned_cols=284 Identities=24% Similarity=0.257 Sum_probs=200.6
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC--------CCCccce
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--------HSCIVEM 875 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--------HpNIVkl 875 (1142)
..+|++.++||+|+||+||+|++. +..||+|+... .....+. +.+|+.++++++ ||||+++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~----~~~E~~~l~~l~~~~~~~~~~~~iv~~ 106 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS-----AEHYTET----ALDEIRLLKSVRNSDPNDPNREMVVQL 106 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-----CHHHHHH----HHHHHHHHHHHHHSCTTCGGGGGBCCE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec-----CCcchHH----HHHHHHHHHHHhhcCCCCCCcceeeee
Confidence 357999999999999999999874 56788887531 1222233 378999999885 7889999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccC
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRD 954 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrD 954 (1142)
++++..... ...+.++||||+ +++|.+.+.. .....+++..++.|+.||+.||.|||++ ||+|||
T Consensus 107 ~~~~~~~~~----------~~~~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrD 172 (397)
T 1wak_A 107 LDDFKISGV----------NGTHICMVFEVL-GHHLLKWIIK---SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTD 172 (397)
T ss_dssp EEEEEEEET----------TEEEEEEEECCC-CCBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCC
T ss_pred ecceeecCC----------CCceEEEEEecc-CccHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 999874221 123569999999 5777777765 2235699999999999999999999998 999999
Q ss_pred CCCCCeeeccccc------------------------------------------cCCCCCeEEEeecCCcccccccccc
Q 001142 955 IKSENILIDLERK------------------------------------------KADGKPVVKLCDFDRAVPLRSFLHT 992 (1142)
Q Consensus 955 LKp~NILld~~~~------------------------------------------~~~~~~~vKL~DFGlA~~l~~~~~~ 992 (1142)
|||+|||++.++. .......+||+|||.+......
T Consensus 173 ikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--- 249 (397)
T 1wak_A 173 IKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--- 249 (397)
T ss_dssp CSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---
T ss_pred CCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---
Confidence 9999999986520 0001137999999999765321
Q ss_pred cccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH-H-h
Q 001142 993 CCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLS------ELEIHDLI-Q-M 1064 (1142)
Q Consensus 993 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~------~~el~~~I-~-~ 1064 (1142)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+ .......+ . .
T Consensus 250 ----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 315 (397)
T 1wak_A 250 ----------FTEDIQTRQYRSLEVLIG----SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL 315 (397)
T ss_dssp ----------SCSCCSCGGGCCHHHHHT----SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHH
T ss_pred ----------CccCCCCCcccCChhhcC----CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhc
Confidence 123468999999999986 568899999999999999999999997543 22222222 1 1
Q ss_pred CCCCCchhHHhhhccccccccccc------CCCCCC----------chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 001142 1065 GKRPRLTDELEALGSCHEHEVAQS------GSGFEK----------PEAELETLSFLVDVFRRCTEENPTERPTAGDLYE 1128 (1142)
Q Consensus 1065 ~~~p~l~~~l~~~~~~~~~~~~~~------~~~~~~----------~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~ 1128 (1142)
+..+. ........ ...+... ...... .......++.+.+||.+||+.||++|||+.|+++
T Consensus 316 ~~~p~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 316 GKVPR---KLIVAGKY-SKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp CSCCH---HHHHHCTT-GGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCCCh---HHhhcccc-cccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 11111 00000000 0000000 000000 0112356778999999999999999999999999
Q ss_pred HHHhh
Q 001142 1129 MFVAR 1133 (1142)
Q Consensus 1129 ~L~~~ 1133 (1142)
|+|+.
T Consensus 392 hp~~~ 396 (397)
T 1wak_A 392 HPWLN 396 (397)
T ss_dssp SGGGG
T ss_pred Ccccc
Confidence 99986
No 204
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.2e-37 Score=337.96 Aligned_cols=262 Identities=22% Similarity=0.289 Sum_probs=201.0
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|.+. +..+|+|+..... +.+ .+|+.++++++||||+++++++.....
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~ 78 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKA----EREVKALAKLDHVNIVHYNGCWDGFDY 78 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGG----HHHHHHHHHCCCTTBCCEEEEEEEEEE
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHH----HHHHHHHHhCCCCCEEEEeeeEecccc
Confidence 46899999999999999999985 7778888765321 123 689999999999999999998865221
Q ss_pred CCCCC--CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 885 LPSAD--GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 885 ~~~~~--~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
.+... ..........++||||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~ 155 (284)
T 2a19_B 79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR---RGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL 155 (284)
T ss_dssp C---------CCEEEEEEEEECCCCSCBHHHHHHHG---GGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CcccccccccccCcceEEEEEeccCCCCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE
Confidence 10000 00011233579999999999999999863 22468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||++....... ......||+.|+|||++.+ ..++.++||||||+++|+
T Consensus 156 ~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 213 (284)
T 2a19_B 156 VDT-------KQVKIGDFGLVTSLKNDG-----------KRTRSKGTLRYMSPEQISS----QDYGKEVDLYALGLILAE 213 (284)
T ss_dssp EET-------TEEEECCCTTCEESSCCS-----------CCCCCCSCCTTSCHHHHHC----SCCCTHHHHHHHHHHHHH
T ss_pred cCC-------CCEEECcchhheeccccc-----------cccccCCcccccChhhhcc----CCCcchhhhHHHHHHHHH
Confidence 887 789999999997654321 1123458999999999876 567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|..||.. .......+.....+ ...+..+.+++.+||+.||.+|||
T Consensus 214 l~~~~~~~~~--~~~~~~~~~~~~~~------------------------------~~~~~~~~~li~~~l~~dp~~Rps 261 (284)
T 2a19_B 214 LLHVCDTAFE--TSKFFTDLRDGIIS------------------------------DIFDKKEKTLLQKLLSKKPEDRPN 261 (284)
T ss_dssp HHSCCSSHHH--HHHHHHHHHTTCCC------------------------------TTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhcCCcchh--HHHHHHHhhccccc------------------------------ccCCHHHHHHHHHHccCChhhCcC
Confidence 9999988742 22222222221110 033456899999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001142 1123 AGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1123 a~EVL~~L~~~~ss~ 1137 (1142)
+.|++++++....+.
T Consensus 262 ~~e~l~~l~~~~~~~ 276 (284)
T 2a19_B 262 TSEILRTLTVWKKSP 276 (284)
T ss_dssp HHHHHHHHHHHTC--
T ss_pred HHHHHHHHHHHhhCC
Confidence 999999999886654
No 205
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=5.8e-37 Score=345.23 Aligned_cols=262 Identities=23% Similarity=0.370 Sum_probs=202.6
Q ss_pred CCCcceeeeecccCceEEEEEEE-------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~-------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g 877 (1142)
.++|++.+.||+|+||+||+|++ .+..+|+|+.... ......+.+ .+|+.++.++ +||||+++++
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~----~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHRAL----MSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHHH----HHHHHHHHHHCCCTTBCCEEE
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC---CCcHHHHHH----HHHHHHHHhcccCCCeeeEEE
Confidence 45799999999999999999985 2356888875422 223333334 7999999999 6999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhcc-----------CCCCCCHHHHHHHHHHHHHHHHHHH
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVELH 946 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~-----------~~~~ls~~~i~~Ia~qIa~gL~yLH 946 (1142)
++...+. ..++||||+++++|.+++...... ....+++..+..++.||+.||.|||
T Consensus 99 ~~~~~~~-------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 165 (316)
T 2xir_A 99 ACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 165 (316)
T ss_dssp EECCTTS-------------CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------------ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH
Confidence 9875432 249999999999999999752110 0123899999999999999999999
Q ss_pred hCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001142 947 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1026 (1142)
Q Consensus 947 s~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1026 (1142)
++||+||||||+|||++.+ +.+||+|||+++........ .......||+.|+|||++.+ ..
T Consensus 166 ~~~i~H~dikp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~ 226 (316)
T 2xir_A 166 SRKCIHRDLAARNILLSEK-------NVVKICDFGLARDIYKDPDY--------VRKGDARLPLKWMAPETIFD----RV 226 (316)
T ss_dssp HTTCCCSCCSGGGEEECGG-------GCEEECCCGGGSCTTTCTTS--------EEETTEEECGGGCCHHHHHH----CC
T ss_pred hCCcccccCccceEEECCC-------CCEEECCCccccccccCccc--------eeccCCCcceeecCchhhcc----cc
Confidence 9999999999999999877 78999999999765332111 01123457889999999876 56
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHH
Q 001142 1027 YGLEVDIWSYGCLLLELLT-LQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1104 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLt-G~~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1104 (1142)
++.++||||||+++|+|++ |..||.+.... .....+..+..+..+. ..++.
T Consensus 227 ~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~ 279 (316)
T 2xir_A 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD---------------------------YTTPE 279 (316)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCT---------------------------TCCHH
T ss_pred ccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCC---------------------------CCCHH
Confidence 8899999999999999998 99999875433 3334444433222111 34567
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1105 LVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1105 L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
+.+++.+||+.||.+|||+.|+++++...
T Consensus 280 l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 280 MYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 99999999999999999999999998764
No 206
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=9e-37 Score=345.60 Aligned_cols=286 Identities=21% Similarity=0.241 Sum_probs=206.9
Q ss_pred CCcceeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEe
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKI 880 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~---~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkl~g~~~ 880 (1142)
.+|++.+.||+|+||.||+|++. +..+|+|+......... ....+ .+|+.+++.+ +||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~~----~~e~~~l~~l~~~~h~~i~~~~~~~~ 84 (326)
T 1blx_A 11 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--MPLST----IREVAVLRHLETFEHPNVVRLFDVCT 84 (326)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS--CBCTH----HHHHHHHHHHHHTCCTTBCCEEEEEE
T ss_pred hceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc--CCchh----hHHHHHHHhhhccCCCCeEeeeeeee
Confidence 57999999999999999999983 56788998654432111 11122 5677776665 8999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
.... ......++||||++ ++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+||
T Consensus 85 ~~~~---------~~~~~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Ni 151 (326)
T 1blx_A 85 VSRT---------DRETKLTLVFEHVD-QDLTTYLDK---VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 151 (326)
T ss_dssp EEEC---------SSEEEEEEEEECCS-CBHHHHHHH---SCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGE
T ss_pred eccc---------CCCceEEEEEecCC-CCHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHe
Confidence 3210 01235699999998 799999976 2334589999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++
T Consensus 152 li~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 209 (326)
T 1blx_A 152 LVTSS-------GQIKLADFGLARIYSFQMA-----------LTSVVVTLWYRAPEVLLQ----SSYATPVDLWSVGCIF 209 (326)
T ss_dssp EECTT-------CCEEECSCCSCCCCCGGGG-----------GCCCCCCCTTCCHHHHTT----CCCCTHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEecCcccccccCCCC-----------ccccccccceeCHHHHhc----CCCCcchhHHHHHHHH
Confidence 99887 7899999999976543211 123468999999999876 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+|++|+.||.+....+....+... ..+.. ..+......... .................+..+.+|+.+||+.||.+
T Consensus 210 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 287 (326)
T 1blx_A 210 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGE-EDWPRDVALPRQ-AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAK 287 (326)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCG-GGSCTTCSSCGG-GSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTT
T ss_pred HHHHcCCCCCCCCCHHHHHHHHHHHcCCCCc-ccCccccccchh-hhcccCcchhhhccccCCHHHHHHHHHHcCCCccc
Confidence 9999999999987776665555321 11111 000000000000 00000000011111246678999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001142 1120 RPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~s 1135 (1142)
|||+.|+++|+|+...
T Consensus 288 Rpt~~e~l~hp~~~~~ 303 (326)
T 1blx_A 288 RISAYSALSHPYFQDL 303 (326)
T ss_dssp SCCHHHHHTSGGGTTC
T ss_pred CCCHHHHhcCcccccc
Confidence 9999999999999754
No 207
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.5e-36 Score=337.26 Aligned_cols=259 Identities=22% Similarity=0.326 Sum_probs=200.8
Q ss_pred CcceeeeecccCceEEEEEEEC--Cc---cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKFG--SA---DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~~--~~---~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.|.+.++||+|+||+||+|.+. .. .+|+|+. .. .......+.+ .+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~--~~-~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~ 94 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SR-ITEMQQVEAF----LREGLLMRGLNHPNVLALIGIMLPP 94 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEE--TT-CCSHHHHHHH----HHHHHHHHTCCCTTBCCCCEEECCS
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeec--cc-cccHHHHHHH----HHHHHHHHhCCCCCeeeEEEEEecC
Confidence 4677899999999999999872 22 4666654 32 2223333444 7999999999999999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+. ..++||||+.+++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 95 ~~-------------~~~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili 157 (298)
T 3pls_A 95 EG-------------LPHVLLPYMCHGDLLQFIRS----PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML 157 (298)
T ss_dssp SS-------------CCEEEECCCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CC-------------CcEEEEecccCCCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE
Confidence 32 23899999999999999964 23568999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+++........ .........+|+.|+|||.+.+ ..++.++||||||+++|+
T Consensus 158 ~~~-------~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 220 (298)
T 3pls_A 158 DES-------FTVKVADFGLARDILDREYY------SVQQHRHARLPVKWTALESLQT----YRFTTKSDVWSFGVLLWE 220 (298)
T ss_dssp CTT-------CCEEECCTTSSCTTTTGGGG------CSCCSSCTTCGGGGSCHHHHTT----CCCCHHHHHHHHHHHHHH
T ss_pred cCC-------CcEEeCcCCCcccccCCccc------ccccCcCCCCCccccChhhhcc----CCCChhhchhhHHHHHHH
Confidence 877 78999999999765432211 1112234468899999999876 568899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++ +.+||......+....+.....+..+ ...++.+.+++.+||+.||.+||
T Consensus 221 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~p~~Rp 273 (298)
T 3pls_A 221 LLTRGAPPYRHIDPFDLTHFLAQGRRLPQP---------------------------EYCPDSLYQVMQQCWEADPAVRP 273 (298)
T ss_dssp HHHTSCCTTTTSCGGGHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HhhCCCCCCccCCHHHHHHHhhcCCCCCCC---------------------------ccchHHHHHHHHHHccCChhhCc
Confidence 999 55556655555555555544432211 13456799999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001142 1122 TAGDLYEMFVART 1134 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ 1134 (1142)
|+.++++.+....
T Consensus 274 s~~~ll~~l~~~~ 286 (298)
T 3pls_A 274 TFRVLVGEVEQIV 286 (298)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999887653
No 208
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=346.33 Aligned_cols=295 Identities=19% Similarity=0.211 Sum_probs=198.3
Q ss_pred CCCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 802 DPGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 802 ~~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
+...+++|++.+.||+|+||.||+|++.+..+|+|+..... ...+ ....|+..+..++||||+++++.+..
T Consensus 8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-------~~~~--~~e~~~~~~~~~~h~~i~~~~~~~~~ 78 (336)
T 3g2f_A 8 PSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-------RQNF--INEKNIYRVPLMEHDNIARFIVGDER 78 (336)
T ss_dssp -CCCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG-------HHHH--HHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred CCcChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc-------hhhH--HHHHHHHHHHhccCcchhhheecccc
Confidence 34567899999999999999999999999999999975321 1122 01234444556899999999987654
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---------Cccc
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---------HIMH 952 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~---------gIvH 952 (1142)
.... .....++||||+++|+|.+++.. ...++..+..|+.||+.||.|||++ ||+|
T Consensus 79 ~~~~---------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH 143 (336)
T 3g2f_A 79 VTAD---------GRMEYLLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISH 143 (336)
T ss_dssp ECTT---------SCEEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEEC
T ss_pred cccC---------CCceEEEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceee
Confidence 2211 12356899999999999999976 3468999999999999999999999 9999
Q ss_pred cCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC---CCCCc
Q 001142 953 RDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP---NLYGL 1029 (1142)
Q Consensus 953 rDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~---~~~s~ 1029 (1142)
|||||+|||++.+ +.+||+|||+++.+........ ...........||+.|+|||++.+.... ..++.
T Consensus 144 ~Dikp~Nill~~~-------~~~kL~DFG~a~~~~~~~~~~~--~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 214 (336)
T 3g2f_A 144 RDLNSRNVLVKND-------GTCVISDFGLSMRLTGNRLVRP--GEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALK 214 (336)
T ss_dssp SSCSGGGEEECTT-------SCEEECCCTTCEECSSSSCC-----------CCTTSCGGGCCHHHHTTCCCGGGHHHHHH
T ss_pred cccccceEEEcCC-------CcEEEeeccceeecccccccCc--cccccccccCCCccceeCchhhcCCccccccccccc
Confidence 9999999999887 7899999999986543211100 0001112244699999999998752110 24567
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCH-HHH--HHHHHhCCCCCchhHHhhhcccccccccccCCCCCC-chhhhhhHHHH
Q 001142 1030 EVDIWSYGCLLLELLTLQVPYMGLSE-LEI--HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK-PEAELETLSFL 1105 (1142)
Q Consensus 1030 ksDVwSLGviL~ELLtG~~Pf~~~~~-~el--~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L 1105 (1142)
++|||||||++|||++|..||..... .+. .........+............ .....+.. .......++.+
T Consensus 215 ~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l 288 (336)
T 3g2f_A 215 QVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSRE------KQRPKFPEAWKENSLAVRSL 288 (336)
T ss_dssp HHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTS------CCCCCCCTTCCCCSHHHHHH
T ss_pred ccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhccc------ccCCCCCcccccccchHHHH
Confidence 89999999999999999776643211 000 0000111111111100000000 00000000 00012467789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1106 VDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1106 ~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
.+||.+||+.||++|||+.|+++.+.....
T Consensus 289 ~~li~~cl~~dP~~Rps~~e~l~~L~~ll~ 318 (336)
T 3g2f_A 289 KETIEDCWDQDAEARLTAQXAEERMAELMM 318 (336)
T ss_dssp HHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCChhhCcchHHHHHHHHHHHH
Confidence 999999999999999999999988776543
No 209
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-36 Score=345.51 Aligned_cols=270 Identities=22% Similarity=0.321 Sum_probs=198.1
Q ss_pred cceeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 809 LSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
|++.++||+|+||+||++.+ .+..+|+|+.... ......+.+ .+|+.++++++||||+++++++.+.
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD---AGPQHRSGW----KQEIDILRTLYHEHIIKYKGCCEDA 105 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT---CCHHHHHHH----HHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc---cChHHHHHH----HHHHHHHHhCCCcchhhEEEEEecC
Confidence 49999999999999999876 4667888886432 222333334 8999999999999999999999864
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+. ...++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 106 ~~------------~~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~ 167 (318)
T 3lxp_A 106 GA------------ASLQLVMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL 167 (318)
T ss_dssp TT------------TEEEEEECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CC------------ceEEEEEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE
Confidence 31 256999999999999999864 348999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||+++|+
T Consensus 168 ~~~-------~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 229 (318)
T 3lxp_A 168 DND-------RLVKIGDFGLAKAVPEGHEYY-------RVREDGDSPVFWYAPECLKE----YKFYYASDVWSFGVTLYE 229 (318)
T ss_dssp CTT-------CCEEECCGGGCEECCTTCSEE-------EC---CCCCGGGCCHHHHHH----CEEEHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEECCcccccccccccccc-------ccccCCCCCceeeChHHhcC----CCCCcHHHHHHHHHHHHH
Confidence 887 789999999998654422110 01223458889999999976 467799999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001142 1043 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1122 (1142)
Q Consensus 1043 LLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPS 1122 (1142)
|++|+.||...... ...... ... ........ .......... ......++.+.+|+.+||+.||.+|||
T Consensus 230 ll~g~~p~~~~~~~-~~~~~~-~~~--~~~~~~~~-----~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rps 297 (318)
T 3lxp_A 230 LLTHCDSSQSPPTK-FLELIG-IAQ--GQMTVLRL-----TELLERGERL---PRPDKCPAEVYHLMKNCWETEASFRPT 297 (318)
T ss_dssp HHTTTCGGGSHHHH-HHHHHC-SCC--HHHHHHHH-----HHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhCCCcccccchh-hhhhhc-ccc--cchhHHHH-----HHHHhcccCC---CCCccccHHHHHHHHHHcCCCcccCcC
Confidence 99999999752211 111110 000 00000000 0000000000 011155678999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001142 1123 AGDLYEMFVAR 1133 (1142)
Q Consensus 1123 a~EVL~~L~~~ 1133 (1142)
+.|+++.+...
T Consensus 298 ~~ell~~L~~l 308 (318)
T 3lxp_A 298 FENLIPILKTV 308 (318)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887654
No 210
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=1.6e-36 Score=338.33 Aligned_cols=278 Identities=20% Similarity=0.283 Sum_probs=196.3
Q ss_pred CCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|++ .+..+|+|+.... ....+. +.+|+.++++++||||+++++++.+...
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 76 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLST----ILSEVMLLASLNHQYVVRYYAAWLERRN 76 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHH----HHHHHHHHTTCCCTTBCCEEEEEEECCC
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHH----HHHHHHHHHhcCchHHHHHHHHHHhhcc
Confidence 3689999999999999999997 4677888876421 223333 3799999999999999999999876432
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
+... -.........++||||+++++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 77 ~~~~-~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~ 151 (303)
T 1zy4_A 77 FVKP-MTAVKKKSTLFIQMEYCENGTLYDLIHS----ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE 151 (303)
T ss_dssp CCC-------CEEEEEEEEECCCSCBHHHHHHH----SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred hhhh-hcccccCCceEEEEecCCCCCHHHhhhc----cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcC
Confidence 1000 0011123467999999999999999986 2346888999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccc----cCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA----HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~----~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+ +.+||+|||.+............. ...........||+.|+|||++.+ ...++.++|||||||++
T Consensus 152 ~-------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il 221 (303)
T 1zy4_A 152 S-------RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG---TGHYNEKIDMYSLGIIF 221 (303)
T ss_dssp T-------SCEEECCCCCCSCTTC-------------------------CTTSCHHHHTS---CSCCCTHHHHHHHHHHH
T ss_pred C-------CCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccC---CCCCcchhhHHHHHHHH
Confidence 7 789999999997654321100000 000111234568999999999875 23678999999999999
Q ss_pred HHHHhCCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+|++ ||... ...+....+..... ..+. ......++.+.+++.+||+.||.+
T Consensus 222 ~~l~~---p~~~~~~~~~~~~~~~~~~~-~~~~-----------------------~~~~~~~~~~~~li~~~l~~dp~~ 274 (303)
T 1zy4_A 222 FEMIY---PFSTGMERVNILKKLRSVSI-EFPP-----------------------DFDDNKMKVEKKIIRLLIDHDPNK 274 (303)
T ss_dssp HHHHS---CCSSHHHHHHHHHHHHSTTC-CCCT-----------------------TCCTTTSHHHHHHHHHHTCSSGGG
T ss_pred HHHHh---ccCCchhHHHHHHhcccccc-ccCc-----------------------cccccchHHHHHHHHHHHhcCccc
Confidence 99998 56432 12223333332211 1110 011144567899999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001142 1120 RPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~s 1135 (1142)
|||+.++++|+|+...
T Consensus 275 Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 275 RPGARTLLNSGWLPVK 290 (303)
T ss_dssp SCCHHHHHHSSCSCCC
T ss_pred CcCHHHHhCCCCcCCC
Confidence 9999999999999753
No 211
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.4e-37 Score=355.71 Aligned_cols=283 Identities=19% Similarity=0.221 Sum_probs=211.1
Q ss_pred CCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHH---------HHHhHHhHHHHHHHHhhCCCCCccce
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADE---------IRNFEYSCLGEVRMLGALRHSCIVEM 875 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~---------~~~~~~~~~~Ei~iL~~L~HpNIVkl 875 (1142)
.+.+|++.+.||+|+||.||+|.+.+..+|+|+............ .......+.+|+.++++++||||+++
T Consensus 29 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 29 YINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp EETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred ccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 457899999999999999999999889999998764422111000 00000234799999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHH------HHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNY------IEKLSETGEKHVSVKLALFIAQDVAAALVELHS-K 948 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~------l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~ 948 (1142)
++++.+.+ ..++||||+++++|.++ +.. .....+++..+..++.||+.||.|||+ +
T Consensus 109 ~~~~~~~~--------------~~~lv~e~~~~~~L~~~~~~~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 171 (348)
T 2pml_X 109 EGIITNYD--------------EVYIIYEYMENDSILKFDEYFFVLDK---NYTCFIPIQVIKCIIKSVLNSFSYIHNEK 171 (348)
T ss_dssp SEEEESSS--------------EEEEEEECCTTCBSSEESSSEESSCS---SSCCCCCHHHHHHHHHHHHHHHHHHHHTS
T ss_pred EEEEeeCC--------------eEEEEEeccCCCcHHHHHHHhhhhhh---ccccCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 99998654 45999999999999988 432 224579999999999999999999999 9
Q ss_pred CccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCC
Q 001142 949 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYG 1028 (1142)
Q Consensus 949 gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s 1028 (1142)
||+||||||+|||++.+ +.+||+|||.+....... .....||+.|+|||++.+. ..++
T Consensus 172 ~i~H~dl~p~Nil~~~~-------~~~kl~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~---~~~~ 229 (348)
T 2pml_X 172 NICHRDVKPSNILMDKN-------GRVKLSDFGESEYMVDKK------------IKGSRGTYEFMPPEFFSNE---SSYN 229 (348)
T ss_dssp CEECCCCCGGGEEECTT-------SCEEECCCTTCEECBTTE------------ECSSCSCGGGCCGGGGSSC---CCEE
T ss_pred CEeecCCChHhEEEcCC-------CcEEEecccccccccccc------------ccCCCCCcCccCchhhcCC---CCCC
Confidence 99999999999999887 789999999997653321 1234689999999998762 2455
Q ss_pred c-hhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001142 1029 L-EVDIWSYGCLLLELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1106 (1142)
Q Consensus 1029 ~-ksDVwSLGviL~ELLtG~~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1106 (1142)
. ++||||||+++|+|++|..||..... .+....+..+.... +..... .................++.+.
T Consensus 230 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~ 300 (348)
T 2pml_X 230 GAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEY-PLDRNH--------FLYPLTNKKSTCSNNFLSNEDI 300 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCC-CCSSSS--------STTTTCC--------CCCHHHH
T ss_pred cchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCC-ccchhh--------hhccccccccccchhhcCHHHH
Confidence 5 99999999999999999999987655 55666665443221 100000 0000000000011125567899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1107 DVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1107 dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
+|+.+||+.||.+|||+.|+++|+|+...
T Consensus 301 ~li~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 301 DFLKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHHHccCChhhCCCHHHHhcCccccCC
Confidence 99999999999999999999999999754
No 212
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.3e-37 Score=349.37 Aligned_cols=269 Identities=22% Similarity=0.307 Sum_probs=205.7
Q ss_pred CCCCCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
.....+|++.+.||+|+||.||+|++.+ .+++|+..... ......+.+ .+|+.++++++||||+++++++.+.
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~--~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIER--DNEDQLKAF----KREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCS--CCCCCCCCC----CTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCC--CCHHHHHHH----HHHHHHHhcCCCCCEeEEEEEEecC
Confidence 3456789999999999999999999875 58888755432 222222334 6899999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
.. .++||||+++++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 102 ~~--------------~~iv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~ 163 (319)
T 2y4i_B 102 PH--------------LAIITSLCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY 163 (319)
T ss_dssp SC--------------EEEECBCCCSEEHHHHTTS----SCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEE
T ss_pred Cc--------------eEEEeecccCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEE
Confidence 53 4999999999999999864 23468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-----CCCCCCchhhHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-----KPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~~~~~s~ksDVwSLG 1037 (1142)
+ + +.+||+|||++......... ..........||+.|+|||++.+.. ....++.++||||||
T Consensus 164 ~-~-------~~~~l~Dfg~~~~~~~~~~~-----~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG 230 (319)
T 2y4i_B 164 D-N-------GKVVITDFGLFSISGVLQAG-----RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG 230 (319)
T ss_dssp C----------CCEECCCSCCC---------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHH
T ss_pred e-C-------CCEEEeecCCcccccccccc-----ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHH
Confidence 7 3 57999999998754322111 0111223445899999999987522 123578999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1038 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+++|+|++|+.||...........+..+..+.... ...+..+.+++.+||..||
T Consensus 231 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~~p 284 (319)
T 2y4i_B 231 TIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ--------------------------IGMGKEISDILLFCWAFEQ 284 (319)
T ss_dssp HHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCC--------------------------SSCCTTHHHHHHHHHCSST
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCc--------------------------CCCCHHHHHHHHHHhcCCh
Confidence 99999999999999887777766665554433211 0233458999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001142 1118 TERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~s 1135 (1142)
.+|||+.++++.+.....
T Consensus 285 ~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 285 EERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp TTSCCHHHHHHHHTTC--
T ss_pred hhCcCHHHHHHHHHHHHH
Confidence 999999999999876544
No 213
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=7.6e-37 Score=351.56 Aligned_cols=283 Identities=19% Similarity=0.197 Sum_probs=204.4
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|.+.+.||+|+||.||+|.+. +..||+|+.. .........+. +.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 97 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS--RPFQSEIFAKR----AYRELLLLKHMQHENVIGLLDVFTPASS 97 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEES--STTSSHHHHHH----HHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEec--ccccchHHHHH----HHHHHHHHHhcCCCCcccHhheEecccc
Confidence 57999999999999999999984 6677777753 22223332333 4799999999999999999999876542
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
. ......++||||++ ++|.+++. ..+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 98 ~--------~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~ 161 (353)
T 3coi_A 98 L--------RNFYDFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE 161 (353)
T ss_dssp G--------GGCCCCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT
T ss_pred c--------ccceeEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECC
Confidence 2 12234599999997 68877653 25899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||++...... .....||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 162 ~-------~~~kl~Dfg~~~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~Di~slG~il~el~ 218 (353)
T 3coi_A 162 D-------CELKILDFGLARHADAE-------------MTGYVVTRWYRAPEVILS---WMHYNQTVDIWSVGCIMAEML 218 (353)
T ss_dssp T-------CCEEECSTTCTTC---------------------CCSBCCSCHHHHSC---CSCCCTTHHHHHHHHHHHHHH
T ss_pred C-------CcEEEeecccccCCCCC-------------ccccccCcCcCCHHHHhC---cCCCCchhhHHHHHHHHHHHH
Confidence 7 78999999999754321 123468999999999865 246789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhcccccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1045 TLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
+|+.||.+.+..+....+... ..+. ................+ ..............++.+.+|+.+||+.||++|
T Consensus 219 ~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 297 (353)
T 3coi_A 219 TGKTLFKGKDYLDQLTQILKVTGVPG-TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR 297 (353)
T ss_dssp HSSCSSBSSCHHHHHHHHHHHHCBCC-HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTS
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCC-HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccC
Confidence 999999987776655554321 1111 11110000000000000 000000011112457789999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001142 1121 PTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~s 1135 (1142)
||+.|+++|+|+...
T Consensus 298 pt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 298 LTAAQALTHPFFEPF 312 (353)
T ss_dssp CCHHHHHTSGGGTTT
T ss_pred CCHHHHhcCcchhhc
Confidence 999999999999743
No 214
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=7.4e-37 Score=353.62 Aligned_cols=281 Identities=14% Similarity=0.133 Sum_probs=199.3
Q ss_pred CCCcceeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHh----HHhHHHHHHHHhhCCCCCccc
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNF----EYSCLGEVRMLGALRHSCIVE 874 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-------~~~vAvKi~~l~~~~~~~~~~~~~----~~~~~~Ei~iL~~L~HpNIVk 874 (1142)
-.+|++.++||+|+||.||+|.+. +..+|+|+....... ...+.+.+ ...+..|+..+..++||||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP-LFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHH-HHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchh-HHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 347999999999999999999884 357899986433110 00011101 112346777788889999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001142 875 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRD 954 (1142)
Q Consensus 875 l~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrD 954 (1142)
+++++..... ...+.++||||+ +++|.+++.. ....+++..+..|+.||+.||+|||++||+|||
T Consensus 113 ~~~~~~~~~~----------~~~~~~lv~e~~-g~~L~~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrD 177 (364)
T 3op5_A 113 YWGSGLHDKN----------GKSYRFMIMDRF-GSDLQKIYEA----NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGD 177 (364)
T ss_dssp EEEEEEEEET----------TEEEEEEEEECE-EEEHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred EEeeeeeccC----------CcceEEEEEeCC-CCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEec
Confidence 9999876321 123569999999 8999999976 235699999999999999999999999999999
Q ss_pred CCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHH
Q 001142 955 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIW 1034 (1142)
Q Consensus 955 LKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVw 1034 (1142)
|||+|||++.+. .+.+||+|||+++.+........ ..........||+.|+|||++.+ ..++.++|||
T Consensus 178 lkp~Nill~~~~-----~~~~kl~DFG~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~ 245 (364)
T 3op5_A 178 IKASNLLLNYKN-----PDQVYLVDYGLAYRYCPEGVHKA---YAADPKRCHDGTIEFTSIDAHNG----VAPSRRGDLE 245 (364)
T ss_dssp CCGGGEEEESSC-----TTCEEECCCTTCEESSGGGCCCC---SSCCSSCCCCCCTTTCCHHHHTT----CCCCHHHHHH
T ss_pred CCHHHEEEecCC-----CCeEEEEECCcceecccCCcccc---cccCcccccCCCCCccCHHHhCC----CCCCchhhHH
Confidence 999999998321 17899999999987654321110 01111234569999999999876 5689999999
Q ss_pred HHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1035 SYGCLLLELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1035 SLGviL~ELLtG~~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
||||++|||++|+.||.+... ............+.+....... .. ....++.+.+++..||
T Consensus 246 slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~~li~~cl 307 (364)
T 3op5_A 246 ILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKC--------FP----------AANAPGEIAKYMETVK 307 (364)
T ss_dssp HHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHH--------SC----------TTCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHh--------cc----------cccCHHHHHHHHHHHh
Confidence 999999999999999985322 2222211111111111111000 00 0144677999999999
Q ss_pred ccCCCCCCCHHHHHHHHHh
Q 001142 1114 EENPTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~ 1132 (1142)
+.||.+||++.+|++.+..
T Consensus 308 ~~~p~~RP~~~~l~~~l~~ 326 (364)
T 3op5_A 308 LLDYTEKPLYENLRDILLQ 326 (364)
T ss_dssp TCCTTCCCCHHHHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHHH
Confidence 9999999999999987754
No 215
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1e-36 Score=339.08 Aligned_cols=263 Identities=22% Similarity=0.324 Sum_probs=197.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC---Cc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG---SA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~---~~--~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
..+|++.+.||+|+||+||+|++. +. .+|+|+....... .....+. +.+|+.++++++||||+++++++.
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~ 91 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMDD----FIREVNAMHSLDHRNLIRLYGVVL 91 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHHH----HHHHHHHHHHCCCTTBCCEEEEEC
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHHH----HHHHHHHHHhCCCCCcccEEEEEc
Confidence 457999999999999999999862 23 3566654322111 1122333 489999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
+.. .++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 92 ~~~---------------~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Ni 152 (291)
T 1u46_A 92 TPP---------------MKMVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL 152 (291)
T ss_dssp SSS---------------CEEEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred cCC---------------ceeeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheE
Confidence 533 38999999999999999763 24589999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||+++
T Consensus 153 li~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 214 (291)
T 1u46_A 153 LLATR-------DLVKIGDFGLMRALPQNDDHY-------VMQEHRKVPFAWCAPESLKT----RTFSHASDTWMFGVTL 214 (291)
T ss_dssp EEEET-------TEEEECCCTTCEECCC-CCEE-------EC-----CCGGGCCHHHHHH----CEEEHHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEccccccccccccccch-------hhhccCCCCceeeCchhhcC----CCCCchhhHHHHHHHH
Confidence 99887 789999999997654322110 01123457889999999876 4578999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001142 1041 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1119 (1142)
Q Consensus 1041 ~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~ 1119 (1142)
|+|++ |+.||.+....+....+......... ....+..+.+++.+||+.||.+
T Consensus 215 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~~p~~ 268 (291)
T 1u46_A 215 WEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--------------------------PEDCPQDIYNVMVQCWAHKPED 268 (291)
T ss_dssp HHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--------------------------CTTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhCCCCCcccCCHHHHHHHHHccCCCCCC--------------------------CcCcCHHHHHHHHHHccCCccc
Confidence 99999 99999988777766665433211100 0145567999999999999999
Q ss_pred CCCHHHHHHHHHhhcCC
Q 001142 1120 RPTAGDLYEMFVARTSS 1136 (1142)
Q Consensus 1120 RPSa~EVL~~L~~~~ss 1136 (1142)
|||+.++++++......
T Consensus 269 Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 269 RPTFVALRDFLLEAQPT 285 (291)
T ss_dssp SCCHHHHHHHHHHHC--
T ss_pred CcCHHHHHHHHHHhCcc
Confidence 99999999998876543
No 216
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.9e-36 Score=352.68 Aligned_cols=281 Identities=20% Similarity=0.242 Sum_probs=203.8
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CC-----Cccceee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HS-----CIVEMYG 877 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-Hp-----NIVkl~g 877 (1142)
.++|++.+.||+|+||+||+|.+. +..||+|+... ....... +.+|+.+++.+. |+ +|+++++
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~----~~~e~~~l~~l~~~~~~~~~~iv~~~~ 123 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN-----KKAFLNQ----AQIEVRLLELMNKHDTEMKYYIVHLKR 123 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS-----SHHHHHH----HHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec-----cHHHHHH----HHHHHHHHHHHHhcccccceeEEEeee
Confidence 568999999999999999999984 56688887542 1222223 367888888885 55 4899999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--hCCccccCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--SKHIMHRDI 955 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLH--s~gIvHrDL 955 (1142)
++...+ +.++||||++ ++|.+++... ....+++..+..++.||+.||.||| +.||+||||
T Consensus 124 ~~~~~~--------------~~~lv~e~~~-~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDl 185 (382)
T 2vx3_A 124 HFMFRN--------------HLCLVFEMLS-YNLYDLLRNT---NFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDL 185 (382)
T ss_dssp EEEETT--------------EEEEEEECCC-CBHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCC
T ss_pred eeccCC--------------ceEEEEecCC-CCHHHHHhhc---CcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCC
Confidence 988654 4599999996 6999999862 2245899999999999999999999 579999999
Q ss_pred CCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001142 956 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1035 (1142)
Q Consensus 956 Kp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwS 1035 (1142)
||+|||++.+.. +.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||
T Consensus 186 kp~NIll~~~~~-----~~~kL~DFG~a~~~~~~-------------~~~~~~t~~y~aPE~~~~----~~~~~~~DiwS 243 (382)
T 2vx3_A 186 KPENILLCNPKR-----SAIKIVDFGSSCQLGQR-------------IYQYIQSRFYRSPEVLLG----MPYDLAIDMWS 243 (382)
T ss_dssp SGGGEEESSTTS-----CCEEECCCTTCEETTCC-------------CCSSCSCGGGCCHHHHTT----CCCCTHHHHHH
T ss_pred CcccEEEecCCC-----CcEEEEeccCceecccc-------------cccccCCccccChHHHcC----CCCCcHHHHHH
Confidence 999999964321 78999999999765321 123468999999999976 56899999999
Q ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcc-------ccccccc-----ccCCCCCC---------
Q 001142 1036 YGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGS-------CHEHEVA-----QSGSGFEK--------- 1094 (1142)
Q Consensus 1036 LGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~-------~~~~~~~-----~~~~~~~~--------- 1094 (1142)
|||++|||++|+.||.+.+..+....+................. .....+. .....+..
T Consensus 244 lG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 323 (382)
T 2vx3_A 244 LGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 323 (382)
T ss_dssp HHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHH
Confidence 99999999999999998887776666543222211111110000 0000000 00000000
Q ss_pred ---------------chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1095 ---------------PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1095 ---------------~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
........+.+.+||.+||+.||++|||++|+++|+|++..
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 324 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred hhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 00011234579999999999999999999999999999754
No 217
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.5e-36 Score=343.01 Aligned_cols=266 Identities=26% Similarity=0.365 Sum_probs=203.0
Q ss_pred CCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhh--CCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~--L~HpNIVkl~g~~~~~~~ 884 (1142)
++|++.+.||+|+||.||+|++.+..+|+|+.... ....+ .+|++++.. ++||||+++++++.....
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------~~~~~----~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERSW----FREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG-------GHHHH----HHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch-------hHHHH----HHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 46899999999999999999999999999986421 12233 678888877 689999999999876431
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCccccCCC
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDIK 956 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLH--------s~gIvHrDLK 956 (1142)
.....++||||+++++|.+++.. ..+++..+..++.||+.||.||| ++||+|||||
T Consensus 111 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk 174 (342)
T 1b6c_B 111 ----------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174 (342)
T ss_dssp ----------SCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCS
T ss_pred ----------ccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCC
Confidence 12256999999999999999976 35899999999999999999999 8999999999
Q ss_pred CCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC--CCCchhhHH
Q 001142 957 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDIW 1034 (1142)
Q Consensus 957 p~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksDVw 1034 (1142)
|+|||++.+ +.+||+|||++........... .......||+.|+|||++.+..... .++.++|||
T Consensus 175 p~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~ 241 (342)
T 1b6c_B 175 SKNILVKKN-------GTCCIADLGLAVRHDSATDTID------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY 241 (342)
T ss_dssp GGGEEECTT-------SCEEECCCTTCEEEETTTTEEE------ECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHH
T ss_pred HHHEEECCC-------CCEEEEECCCceeccccccccc------cccccCCcCcccCCHhhhcccccccccccCCcccHH
Confidence 999999887 7899999999976543221100 0122446999999999987632111 234789999
Q ss_pred HHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHHh-CCCCCchhHHhhhcccccccccccCCCCCCchhh
Q 001142 1035 SYGCLLLELLTL----------QVPYMGLS-----ELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1098 (1142)
Q Consensus 1035 SLGviL~ELLtG----------~~Pf~~~~-----~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1142)
||||++|||++| ..||.... ...+...+.. ...+.++..+ ..
T Consensus 242 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 299 (342)
T 1b6c_B 242 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QS 299 (342)
T ss_dssp HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG----------------------GT
T ss_pred HHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccc----------------------cc
Confidence 999999999999 78886532 2333333322 2222222111 11
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1099 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1099 ~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
...++.+.+|+.+||+.||++|||+.+|++++....
T Consensus 300 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 300 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp SHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 256778999999999999999999999999987654
No 218
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.2e-36 Score=370.47 Aligned_cols=256 Identities=26% Similarity=0.370 Sum_probs=207.5
Q ss_pred CCCcceeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~-~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.++|++.++||+|+||.||+|.+.+ ..||+|+.+.. ... .+.| .+|+.+|++++|||||++++++.+ .
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~---~~~~----~~E~~~l~~l~hpniv~~~~~~~~-~- 334 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMS---PEAF----LQEAQVMKKLRHEKLVQLYAVVSE-E- 334 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTT--SSC---HHHH----HHHHHHHHHCCCTTBCCEEEEECS-S-
T ss_pred hhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCC--CCC---HHHH----HHHHHHHHhCCCCCEeeEEEEEee-c-
Confidence 4568999999999999999999964 56888875432 111 2334 799999999999999999999864 2
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..+|||||+++|+|.++++... ...+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 335 -------------~~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~ 398 (535)
T 2h8h_A 335 -------------PIYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 398 (535)
T ss_dssp -------------SCEEEECCCTTEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred -------------cceEeeehhcCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcC
Confidence 2399999999999999997521 235899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+|||+++........ ......++..|+|||++.. ..++.++|||||||++|||+
T Consensus 399 ~-------~~~kl~DFG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwSlGv~l~el~ 458 (535)
T 2h8h_A 399 N-------LVCKVADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELT 458 (535)
T ss_dssp G-------GCEEECCTTSTTTCCCHHHH---------TTCSTTSCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHT
T ss_pred C-------CcEEEcccccceecCCCcee---------cccCCcCcccccCHHHhcc----CCCCchhhHHHHHHHHHHHH
Confidence 7 78999999999765432111 1112346788999999876 56889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1045 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1045 t-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
+ |+.||.+....++...+..+.....+. .+++.+.+||.+||+.||++|||+
T Consensus 459 t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~RPt~ 511 (535)
T 2h8h_A 459 TKGRVPYPGMVNREVLDQVERGYRMPCPP---------------------------ECPESLHDLMCQCWRKEPEERPTF 511 (535)
T ss_dssp TTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhHCcCH
Confidence 9 999999888877777776554322211 455679999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001142 1124 GDLYEMFVARTS 1135 (1142)
Q Consensus 1124 ~EVL~~L~~~~s 1135 (1142)
++|++.|.....
T Consensus 512 ~~l~~~L~~~~~ 523 (535)
T 2h8h_A 512 EYLQAFLEDYFT 523 (535)
T ss_dssp HHHHHHHHTSSC
T ss_pred HHHHHHHHHHhh
Confidence 999998876543
No 219
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.6e-36 Score=342.60 Aligned_cols=264 Identities=24% Similarity=0.260 Sum_probs=195.8
Q ss_pred CCCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
...+.+|++.+.||+|+||.||+|.+. +..+|+|+..... .. .......+.+|+.++++++||||+++++++.
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~---~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~ 104 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETL--SS---DPVFRTRMQREARTAGRLQEPHVVPIHDFGE 104 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGG--GG---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccc--cc---CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe
Confidence 345788999999999999999999974 5667887753221 11 1122234589999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
..+ ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 105 ~~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NI 165 (309)
T 2h34_A 105 IDG--------------QLYVDMRLINGVDLAAMLRRQ-----GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENI 165 (309)
T ss_dssp ETT--------------EEEEEEECCCCEEHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred eCC--------------eEEEEEEecCCCCHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHE
Confidence 654 359999999999999999862 4689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.+ +.+||+|||++......... ......||+.|+|||++.+ ..++.++||||||+++
T Consensus 166 l~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 225 (309)
T 2h34_A 166 LVSAD-------DFAYLVDFGIASATTDEKLT---------QLGNTVGTLYYMAPERFSE----SHATYRADIYALTCVL 225 (309)
T ss_dssp EECTT-------SCEEECSCCC-------------------------CCGGGCCGGGTCC--------CCCHHHHHHHHH
T ss_pred EEcCC-------CCEEEecCccCccccccccc---------cccccCCCcCccCHHHHcC----CCCCchHhHHHHHHHH
Confidence 99877 78999999998754432111 1123468999999999875 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|+.||.+.....+...+.... +.... .....++.+.+++.+||+.||++|
T Consensus 226 ~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~------------------------~~~~~~~~l~~li~~~l~~dP~~R 280 (309)
T 2h34_A 226 YECLTGSPPYQGDQLSVMGAHINQAI-PRPST------------------------VRPGIPVAFDAVIARGMAKNPEDR 280 (309)
T ss_dssp HHHHHSSCSSCSCHHHHHHHHHHSCC-CCGGG------------------------TSTTCCTHHHHHHHHHTCSSGGGS
T ss_pred HHHHHCCCCCCCchHHHHHHHhccCC-CCccc------------------------cCCCCCHHHHHHHHHhccCCHHHH
Confidence 99999999998765543333333221 11100 001445679999999999999999
Q ss_pred C-CHHHHHHHHHhhcC
Q 001142 1121 P-TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1121 P-Sa~EVL~~L~~~~s 1135 (1142)
| +++++++.+.....
T Consensus 281 p~s~~~l~~~l~~~l~ 296 (309)
T 2h34_A 281 YVTCGDLSAAAHAALA 296 (309)
T ss_dssp CSSHHHHHHHHHHTCC
T ss_pred HHhHHHHHHHHHHHHH
Confidence 9 99999998876544
No 220
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.2e-36 Score=345.41 Aligned_cols=284 Identities=18% Similarity=0.184 Sum_probs=203.1
Q ss_pred CCCcceeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCC------cccee
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC------IVEMY 876 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~---~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpN------IVkl~ 876 (1142)
.++|++.+.||+|+||+||+|.+. +..+|+|+... .....+. +.+|+.++++++|++ ++.++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~-----~~~~~~~----~~~E~~~l~~l~~~~~~~~~~~~~~~ 88 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN-----VGKYREA----ARLEINVLKKIKEKDKENKFLCVLMS 88 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS-----CHHHHHH----HHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc-----cccchhH----HHHHHHHHHHHhhcCCCCceeEEEee
Confidence 367999999999999999999984 25688888531 1222233 378999999887655 88888
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001142 877 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 956 (1142)
Q Consensus 877 g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLK 956 (1142)
+++...+ +.++||||+ +++|.+++.. .....+++..+..|+.||+.||.|||++||+|||||
T Consensus 89 ~~~~~~~--------------~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlk 150 (355)
T 2eu9_A 89 DWFNFHG--------------HMCIAFELL-GKNTFEFLKE---NNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLK 150 (355)
T ss_dssp EEEEETT--------------EEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred eeeeeCC--------------eEEEEEecc-CCChHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 8887654 459999999 5788887765 233469999999999999999999999999999999
Q ss_pred CCCeeeccccc------------cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001142 957 SENILIDLERK------------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1024 (1142)
Q Consensus 957 p~NILld~~~~------------~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1024 (1142)
|+|||++.... .....+.+||+|||+++..... .....||+.|+|||++.+
T Consensus 151 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~---- 213 (355)
T 2eu9_A 151 PENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-------------HTTIVATRHYRPPEVILE---- 213 (355)
T ss_dssp GGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-------------CCSSCSCGGGCCHHHHTT----
T ss_pred HHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc-------------ccCCcCCCcccCCeeeec----
Confidence 99999943210 0012278999999999753321 123468999999999976
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCC-----------
Q 001142 1025 NLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE----------- 1093 (1142)
Q Consensus 1025 ~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~----------- 1093 (1142)
..++.++|||||||++|||++|..||......+....+.....+........... ...+......+.
T Consensus 214 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 291 (355)
T 2eu9_A 214 LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKE 291 (355)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSC--GGGEETTEECCCTTSHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccc--hhhhcccccccccccchhccccc
Confidence 5688999999999999999999999998776665544433222111111110000 000000000000
Q ss_pred -------CchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1094 -------KPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1094 -------~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
........+..+.+|+.+||+.||++|||+.|+++|+|+..-
T Consensus 292 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~ 340 (355)
T 2eu9_A 292 NCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340 (355)
T ss_dssp HCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGC
T ss_pred cCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCC
Confidence 000011446689999999999999999999999999999854
No 221
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=2.5e-38 Score=353.85 Aligned_cols=267 Identities=26% Similarity=0.372 Sum_probs=186.0
Q ss_pred CCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhh--CCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~--L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|++.+..+|+|++... ....+ .+|.+++.. ++||||+++++++.....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-------~~~~~----~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 71 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERSW----FREAEIYQTVMLRHENILGFIAADNKDNG 71 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-T-------THHHH----HHHHHHHTSTTCCC-CBCCEEEEEEEECS
T ss_pred ceeeehhhccCCCCeEEEEEEEcCcceEEEEeccc-------chhhH----HHHHHHHHHHhccCcceeeeeeecccCCC
Confidence 36899999999999999999999999999985311 11222 578888877 689999999999886431
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH--------hCCccccCCC
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDIK 956 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLH--------s~gIvHrDLK 956 (1142)
.....++||||+++|+|.++++. ..+++..+..++.|++.||.||| ++||+|||||
T Consensus 72 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk 135 (303)
T 3gxj_A 72 ----------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135 (303)
T ss_dssp ----------SSEEEEEEEECCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCC
T ss_pred ----------ccceeEEEEeccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCC
Confidence 12356999999999999999975 35888899999999999999999 9999999999
Q ss_pred CCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC--CCCchhhHH
Q 001142 957 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDIW 1034 (1142)
Q Consensus 957 p~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksDVw 1034 (1142)
|+|||++.+ +.+||+|||++........... .......||+.|+|||++.+..... .++.++|||
T Consensus 136 p~Nil~~~~-------~~~kl~DFg~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw 202 (303)
T 3gxj_A 136 SKNILVKKN-------GTCCIADLGLAVRHDSATDTID------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY 202 (303)
T ss_dssp GGGC-CCTT-------CCC-BCCCCC-CCEETTTTEES------CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred HHHeEECCC-------CCEEEeecCcceeccCCCcccc------cccCCCCcCccccCHhhhcCcccccccccCcchhHH
Confidence 999999887 7899999999976543221110 1122346999999999987632111 344789999
Q ss_pred HHHHHHHHHHhC----------CCCCCCCCH-----HHHHHHH-HhCCCCCchhHHhhhcccccccccccCCCCCCchhh
Q 001142 1035 SYGCLLLELLTL----------QVPYMGLSE-----LEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1098 (1142)
Q Consensus 1035 SLGviL~ELLtG----------~~Pf~~~~~-----~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1142)
||||++|||++| ..||..... .+....+ .....+..+..+ ..
T Consensus 203 slG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 260 (303)
T 3gxj_A 203 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QS 260 (303)
T ss_dssp C-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGG----------------------GS
T ss_pred HHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccc----------------------cc
Confidence 999999999999 666654211 1112222 111111111110 11
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1099 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1099 ~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
...++.+.+++.+||+.||.+|||+.++++.+.....
T Consensus 261 ~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 261 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp SHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred hhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 2566789999999999999999999999999887644
No 222
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.3e-36 Score=333.86 Aligned_cols=263 Identities=17% Similarity=0.164 Sum_probs=194.7
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
-++|++.+.||+|+||.||+|++ .+..+|+|+...... ...+ .+|+.+++.++|++++..+..+....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~----~~e~~~l~~l~~~~~i~~~~~~~~~~ 77 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQL----HIESKIYKMMQGGVGIPTIRWCGAEG 77 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCCH----HHHHHHHHHHTTSTTCCCEEEEEEET
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc------chHH----HHHHHHHHHhcCCCCCCeeeeecCCC
Confidence 35799999999999999999996 567788887543321 1123 68999999999888887777665422
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee-
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI- 962 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl- 962 (1142)
...++||||+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 78 -------------~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~ 139 (296)
T 4hgt_A 78 -------------DYNVMVMELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG 139 (296)
T ss_dssp -------------TEEEEEEECC-CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred -------------CceEEEEEcc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeee
Confidence 1459999999 89999999752 3469999999999999999999999999999999999999
Q ss_pred --ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 963 --DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 963 --d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+.+ +.+||+|||+++.......... ..........||+.|+|||++.+ ..++.++|||||||++
T Consensus 140 ~~~~~-------~~~kL~Dfg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 205 (296)
T 4hgt_A 140 LGKKG-------NLVYIIDFGLAKKYRDARTHQH---IPYRENKNLTGTARYASINTHLG----IEQSRRDDLESLGYVL 205 (296)
T ss_dssp CGGGT-------TCEEECCCTTCEECBCTTTCCB---CCCCCSCCCCSCGGGCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred ccCCC-------CeEEEecCccceeccCcccCcc---CCCCcccccCCCccccchHHhcC----CCCCchhHHHHHHHHH
Confidence 444 7899999999987654322110 01112335579999999999876 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHH---HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1041 LELLTLQVPYMGLSEL---EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~---el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
|+|++|+.||.+.... +....+.....+... +......++.+.+++.+||+.||
T Consensus 206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p 262 (296)
T 4hgt_A 206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----------------------EVLCKGYPSEFATYLNFCRSLRF 262 (296)
T ss_dssp HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----------------------HHHTTTSCHHHHHHHHHHHTSCT
T ss_pred HHHhcCCCCCcccchhhhhhhhhhhhcccccchh-----------------------hhhhccCCHHHHHHHHHHHhcCC
Confidence 9999999999764321 112111111000000 00001446679999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001142 1118 TERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~ 1133 (1142)
++|||+.++++.+...
T Consensus 263 ~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 263 DDKPDYSYLRQLFRNL 278 (296)
T ss_dssp TCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 9999999999876553
No 223
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=4.2e-36 Score=335.01 Aligned_cols=263 Identities=17% Similarity=0.162 Sum_probs=197.6
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
-++|++.+.||+|+||.||+|++ .+..+|+|+...... .+.+ .+|+.++++++|++++..+.++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~~----~~e~~~l~~l~~~~~i~~~~~~~~~~ 77 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQL----HIESKIYKMMQGGVGIPTIRWCGAEG 77 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS------CCHH----HHHHHHHHHHTTSTTCCCEEEEEEET
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc------hhHH----HHHHHHHHHhhcCCCCCccccccCCC
Confidence 35799999999999999999996 577888887653321 1123 68999999999888877776664422
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
...++||||+ +++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 78 -------------~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~ 139 (296)
T 3uzp_A 78 -------------DYNVMVMELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG 139 (296)
T ss_dssp -------------TEEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred -------------CceEEEEEec-CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEe
Confidence 2459999999 89999999752 34699999999999999999999999999999999999995
Q ss_pred ---cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 964 ---LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 964 ---~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
.+ +.+||+|||++........... ..........||+.|+|||++.+ ..++.++|||||||++
T Consensus 140 ~~~~~-------~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 205 (296)
T 3uzp_A 140 LGKKG-------NLVYIIDFGLAKKYRDARTHQH---IPYRENKNLTGTARYASINTHLG----IEQSRRDDLESLGYVL 205 (296)
T ss_dssp CGGGT-------TCEEECCCTTCEECBCTTTCCB---CCCCCSCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred cCCCC-------CeEEEeeCCCcccccccccccc---cccccccccccccccCChhhhcC----CCCCcchhhHHHHHHH
Confidence 33 7899999999987554322110 01112235579999999999876 5688999999999999
Q ss_pred HHHHhCCCCCCCCCH---HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1041 LELLTLQVPYMGLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~---~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
|+|++|+.||.+... .+....+......... +......++.+.+++.+||+.||
T Consensus 206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~dp 262 (296)
T 3uzp_A 206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----------------------EVLCKGYPSEFATYLNFCRSLRF 262 (296)
T ss_dssp HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----------------------HHHTTTSCHHHHHHHHHHHTSCT
T ss_pred HHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-----------------------HHHHhhCCHHHHHHHHHHHhcCc
Confidence 999999999976322 1122222111000000 00001456779999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001142 1118 TERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~ 1133 (1142)
.+|||+.++++.+...
T Consensus 263 ~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 263 DDKPDYSYLRQLFRNL 278 (296)
T ss_dssp TCCCCHHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHH
Confidence 9999999999887654
No 224
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=9.3e-37 Score=346.57 Aligned_cols=268 Identities=23% Similarity=0.325 Sum_probs=183.7
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHhhCCCCCccceeeeEe
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpNIVkl~g~~~ 880 (1142)
...++|++.+.||+|+||.||+|.+. +..+|+|+.... . .......+ ..|+. +++.++||||+++++++.
T Consensus 19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~-~~~~~~~~----~~e~~~~~~~~~h~niv~~~~~~~ 91 (327)
T 3aln_A 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST--V-DEKEQKQL----LMDLDVVMRSSDCPYIVQFYGALF 91 (327)
T ss_dssp CCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECC--C-CHHHHHHH----HHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred cCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecc--c-CchHHHHH----HHHHHHHHHcCCCCcEeeeeeEEE
Confidence 34678999999999999999999985 677888876432 1 22222222 46665 667789999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSEN 959 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDLKp~N 959 (1142)
+.+ ..++||||++ ++|.+++..........+++..+..++.|++.||.|||++ ||+||||||+|
T Consensus 92 ~~~--------------~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~N 156 (327)
T 3aln_A 92 REG--------------DCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSN 156 (327)
T ss_dssp CSS--------------EEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGG
T ss_pred eCC--------------ceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHH
Confidence 654 3599999998 6898888765444456799999999999999999999999 99999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||++....... ......||+.|+|||++........++.++||||||++
T Consensus 157 Ill~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 218 (327)
T 3aln_A 157 ILLDRS-------GNIKLCDFGISGQLVDSI-----------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218 (327)
T ss_dssp EEEETT-------TEEEECCCSSSCC-----------------------------------------CCSHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEccCCCceeccccc-----------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence 999887 789999999997654321 11123689999999998532223568899999999999
Q ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|+|++|+.||.+.... +....+..+..+.+.. ......++.+.+|+.+||+.||+
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~ 275 (327)
T 3aln_A 219 LYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSN-----------------------SEEREFSPSFINFVNLCLTKDES 275 (327)
T ss_dssp HHHHHHSCCCSSCC-------CCCCCSCCCCCCC-----------------------CSSCCCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCC-----------------------cccccCCHHHHHHHHHHhhCChh
Confidence 99999999999764321 1111111111111100 00014566799999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001142 1119 ERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ 1134 (1142)
+|||+.++++|+|+..
T Consensus 276 ~Rps~~ell~hp~~~~ 291 (327)
T 3aln_A 276 KRPKYKELLKHPFILM 291 (327)
T ss_dssp GSCCHHHHTTSHHHHH
T ss_pred hCcCHHHHHhChHHHH
Confidence 9999999999999964
No 225
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.7e-36 Score=369.57 Aligned_cols=254 Identities=22% Similarity=0.315 Sum_probs=198.0
Q ss_pred CCcceee-eecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 807 PSLSSCD-EAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 807 ~~y~l~~-~LG~GsfG~Vy~a~~~----~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
.++.+.+ .||+|+||.||+|.+. +..||+|+. +... .....+.+ .+|+.+|++++|||||++++++..
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~--~~~~-~~~~~~~~----~~E~~il~~l~hpniv~l~~~~~~ 407 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGT-EKADTEEM----MREAQIMHQLDNPYIVRLIGVCQA 407 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEEC--CCCC-SSTTHHHH----HHHHHHHTTCCCTTBCCEEEEEES
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEc--CCCC-ChHHHHHH----HHHHHHHHhCCCCCEeeEEEEecc
Confidence 3455555 8999999999999873 334677764 3221 12223344 799999999999999999999874
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
+ ..++||||+++|+|.+++.. ....+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 408 ~---------------~~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NIL 468 (613)
T 2ozo_A 408 E---------------ALMLVMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVL 468 (613)
T ss_dssp S---------------SEEEEEECCTTCBHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred C---------------CeEEEEEeCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEE
Confidence 2 24999999999999999864 2356999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+ +.+||+|||+++......... .......+|+.|+|||++.+ ..++.++|||||||++|
T Consensus 469 l~~~-------~~vkL~DFGla~~~~~~~~~~-------~~~~~~~~~~~y~APE~~~~----~~~~~~sDvwSlGv~l~ 530 (613)
T 2ozo_A 469 LVNR-------HYAKISDFGLSKALGADDSYY-------TARSAGKWPLKWYAPECINF----RKFSSRSDVWSYGVTMW 530 (613)
T ss_dssp EEET-------TEEEECCCSTTTTCC---------------------CCTTSCHHHHHH----CCCCHHHHHHHHHHHHH
T ss_pred EcCC-------CcEEEeeccCcccccCCCcee-------eeccCCCCccceeCHhhhcC----CCCCcHHHHHHHHHHHH
Confidence 9987 789999999997654321110 01112346788999999976 57899999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1042 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1042 ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
||++ |+.||.+....++...+..+..+..+. .+++.+.+|+.+||+.||++|
T Consensus 531 ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dP~~R 583 (613)
T 2ozo_A 531 EALSYGQKPYKKMKGPEVMAFIEQGKRMECPP---------------------------ECPPELYALMSDCWIYKWEDR 583 (613)
T ss_dssp HHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSTTTS
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------cCCHHHHHHHHHHcCCChhHC
Confidence 9998 999999888878777776665433221 456679999999999999999
Q ss_pred CCHHHHHHHHH
Q 001142 1121 PTAGDLYEMFV 1131 (1142)
Q Consensus 1121 PSa~EVL~~L~ 1131 (1142)
|++.+|++.+.
T Consensus 584 Ps~~~l~~~L~ 594 (613)
T 2ozo_A 584 PDFLTVEQRMR 594 (613)
T ss_dssp CCHHHHHHHHH
T ss_pred cCHHHHHHHHH
Confidence 99999966543
No 226
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=4e-36 Score=346.73 Aligned_cols=287 Identities=19% Similarity=0.252 Sum_probs=202.7
Q ss_pred CCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-----------CCC
Q 001142 805 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-----------HSC 871 (1142)
Q Consensus 805 ~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-----------HpN 871 (1142)
...+|++.+.||+|+||+||+|++ .+..+|+|+... .....+.+ .+|+.+++++. |||
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~----~~e~~~l~~l~~~~~~~~~~~~~~~ 87 (373)
T 1q8y_A 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-----DKVYTEAA----EDEIKLLQRVNDADNTKEDSMGANH 87 (373)
T ss_dssp TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-----CHHHHHHH----HHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC-----Cccchhhh----hHHHHHHHHhhcccccchhccccch
Confidence 456899999999999999999997 567788887542 12222333 78999988876 899
Q ss_pred ccceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-Cc
Q 001142 872 IVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HI 950 (1142)
Q Consensus 872 IVkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gI 950 (1142)
|+++++++...+. .....++||||+ +++|.+++... ....+++..+..|+.||+.||+|||++ ||
T Consensus 88 i~~~~~~~~~~~~----------~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~~i 153 (373)
T 1q8y_A 88 ILKLLDHFNHKGP----------NGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHRRCGI 153 (373)
T ss_dssp BCCCCEEEEEEET----------TEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhhccCC----------CCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 9999999876331 123569999999 79999999862 234589999999999999999999998 99
Q ss_pred cccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCch
Q 001142 951 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLE 1030 (1142)
Q Consensus 951 vHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~k 1030 (1142)
+||||||+|||++.++. ....+.+||+|||++...... .....||+.|+|||++.+ ..++.+
T Consensus 154 vH~Dikp~NIll~~~~~-~~~~~~~kl~Dfg~a~~~~~~-------------~~~~~~t~~y~aPE~~~~----~~~~~~ 215 (373)
T 1q8y_A 154 IHTDIKPENVLMEIVDS-PENLIQIKIADLGNACWYDEH-------------YTNSIQTREYRSPEVLLG----APWGCG 215 (373)
T ss_dssp ECSCCSGGGEEEEEEET-TTTEEEEEECCCTTCEETTBC-------------CCSCCSCGGGCCHHHHHT----CCCCTH
T ss_pred EecCCChHHeEEeccCC-CcCcceEEEcccccccccCCC-------------CCCCCCCccccCcHHHhC----CCCCch
Confidence 99999999999965421 012258999999999765431 123468999999999986 568899
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHH-Hh-CCCCCchhHHhhhcccc-----cccccccCCCCC----
Q 001142 1031 VDIWSYGCLLLELLTLQVPYMGLSE------LEIHDLI-QM-GKRPRLTDELEALGSCH-----EHEVAQSGSGFE---- 1093 (1142)
Q Consensus 1031 sDVwSLGviL~ELLtG~~Pf~~~~~------~el~~~I-~~-~~~p~l~~~l~~~~~~~-----~~~~~~~~~~~~---- 1093 (1142)
+|||||||++|||++|+.||.+... .+....+ .. +..|. .+....... ............
T Consensus 216 ~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (373)
T 1q8y_A 216 ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPS---YLLRNGKYTRTFFNSRGLLRNISKLKFWPL 292 (373)
T ss_dssp HHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCH---HHHHHCTTHHHHBCC--CBSSCCCCCBCCH
T ss_pred HhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCH---HHHhccchhhhhcCCcchhcccccccccch
Confidence 9999999999999999999975431 2222222 11 11111 100000000 000000000000
Q ss_pred ------CchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001142 1094 ------KPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1094 ------~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~s 1135 (1142)
........++.+.+||.+||+.||++|||+.|+++|+|++..
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 340 (373)
T 1q8y_A 293 EDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340 (373)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred hhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence 000112567889999999999999999999999999999865
No 227
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=4.3e-36 Score=339.01 Aligned_cols=262 Identities=21% Similarity=0.295 Sum_probs=195.9
Q ss_pred CCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC--CCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--HpNIVkl~g~~~~~~ 883 (1142)
.+|++.+.||+|+||.||+|.+. +..+|+|+..... ......+.+ .+|+.++.+++ ||||+++++++....
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~----~~E~~~l~~l~~~~~~iv~~~~~~~~~~ 101 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSY----RNEIAYLNKLQQHSDKIIRLYDYEITDQ 101 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS--CCHHHHHHH----HHHHHHHHHHGGGCTTBCCEEEEEECSS
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc--ccccchHHH----HHHHHHHHhccccCCceEEEEEEeecCC
Confidence 45999999999999999999874 5668888865432 233334444 79999999996 599999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
..++|||+ .+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 102 --------------~~~lv~e~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~ 161 (313)
T 3cek_A 102 --------------YIYMVMEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 161 (313)
T ss_dssp --------------EEEEEECC-CSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred --------------EEEEEEec-CCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE
Confidence 35999995 57999999986 34689999999999999999999999999999999999995
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-------CCCCCCchhhHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWSY 1036 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~s~ksDVwSL 1036 (1142)
. +.+||+|||++......... .......||+.|+|||++.+.. ....++.++|||||
T Consensus 162 ~--------~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~sl 225 (313)
T 3cek_A 162 D--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225 (313)
T ss_dssp T--------TEEEECCCSSSCC----------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHH
T ss_pred C--------CeEEEeeccccccccCcccc--------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHH
Confidence 3 68999999999765432111 1112346899999999986521 11367899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHH-HHHHHHHhC-CCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001142 1037 GCLLLELLTLQVPYMGLSEL-EIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1114 (1142)
Q Consensus 1037 GviL~ELLtG~~Pf~~~~~~-el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~ 1114 (1142)
|+++|+|++|+.||...... .....+... .....+ ...+..+.+++.+||+
T Consensus 226 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~ 278 (313)
T 3cek_A 226 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---------------------------DIPEKDLQDVLKCCLK 278 (313)
T ss_dssp HHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC---------------------------CCSCHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCc---------------------------ccchHHHHHHHHHHcc
Confidence 99999999999999764322 222222111 110000 0234568999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcCCC
Q 001142 1115 ENPTERPTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1115 ~DP~~RPSa~EVL~~L~~~~ss~ 1137 (1142)
.||.+|||+.|+++|+|+.....
T Consensus 279 ~dp~~Rps~~ell~h~~~~~~~~ 301 (313)
T 3cek_A 279 RDPKQRISIPELLAHPYVQIQTH 301 (313)
T ss_dssp SSTTTSCCHHHHHTSHHHHCC--
T ss_pred CCcccCcCHHHHhcCccccCCCC
Confidence 99999999999999999986543
No 228
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=353.25 Aligned_cols=290 Identities=20% Similarity=0.236 Sum_probs=206.2
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.++||+|+||+||+|++. +..+|+|+...... ....+. +.+|++++++++||||+++++++.+...
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~----~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 81 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF---LRPVDV----QMREFEVLKKLNHKNIVKLFAIEEETTT 81 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG---GSCHHH----HHHHHHHHHHCCCTTBCCEEEEEECTTT
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc---cchHHH----HHHHHHHHHhcCCCCCCeEEEeeccCCC
Confidence 46999999999999999999985 67788888643221 111222 3689999999999999999999876431
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
...++||||+++++|.+++.... ....+++..++.|+.||+.||+|||++||+||||||+|||+..
T Consensus 82 ------------~~~~lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 147 (396)
T 4eut_A 82 ------------RHKVLIMEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147 (396)
T ss_dssp ------------CCEEEEECCCTTEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE
T ss_pred ------------CeeEEEEecCCCCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEee
Confidence 24599999999999999987522 2234899999999999999999999999999999999999821
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccC----CCCCCchhhHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK----PNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~----~~~~s~ksDVwSLGviL 1040 (1142)
. ....+.+||+|||+++....... .....||+.|+|||++.+... ...++.++|||||||++
T Consensus 148 ~---~~~~~~~kL~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il 213 (396)
T 4eut_A 148 G---EDGQSVYKLTDFGAARELEDDEQ-----------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213 (396)
T ss_dssp C---TTSCEEEEECCGGGCEECCCGGG-----------SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHH
T ss_pred c---CCCceeEEEecCCCceEccCCCc-----------cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHH
Confidence 1 01126799999999976543221 123469999999999864110 02467899999999999
Q ss_pred HHHHhCCCCCCCC----CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1041 LELLTLQVPYMGL----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~----~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
|||++|+.||... ...+....+..+..+............ ...+.. ... .........++.+.+++.+||+.|
T Consensus 214 ~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~-~~~-~~~~l~~~~~~~l~~ll~~~L~~d 290 (396)
T 4eut_A 214 YHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENG-PIDWSG-DMP-VSCSLSRGLQVLLTPVLANILEAD 290 (396)
T ss_dssp HHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTC-CEEEES-SCC-TTCSSCHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCC-CcccCc-cCC-cccccchHHHhhchHHHHHhhccC
Confidence 9999999999642 223444555444433222111100000 000000 000 011112367788999999999999
Q ss_pred CCCCCCHHHHHHHHHhhc
Q 001142 1117 PTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~~~ 1134 (1142)
|++|||+.|+++++....
T Consensus 291 P~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 291 QEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp TTTSCCHHHHHHHHHHHH
T ss_pred hhhhccHHHHHHHHHHHh
Confidence 999999999999887653
No 229
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.2e-36 Score=372.65 Aligned_cols=249 Identities=21% Similarity=0.332 Sum_probs=198.6
Q ss_pred eeecccCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~----~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~ 888 (1142)
++||+|+||.||+|.+ .+..+|||+.+.. .......+. +.+|+.++++++|||||++++++...
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~------ 442 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE--ANDPALKDE----LLAEANVMQQLDNPYIVRMIGICEAE------ 442 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGG--GGCGGGHHH----HHHHHHHHHHCCCTTBCCEEEEEESS------
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccc--cCCHHHHHH----HHHHHHHHHhCCCCCEeeEEEEEecC------
Confidence 4899999999999976 2356888875432 122222333 48999999999999999999998643
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecccccc
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 968 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~ 968 (1142)
..++||||+++|+|.++++. ...+++..+..|+.||+.||+|||++||+||||||+|||++.+
T Consensus 443 ---------~~~lv~E~~~~g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~--- 505 (635)
T 4fl3_A 443 ---------SWMLVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ--- 505 (635)
T ss_dssp ---------SEEEEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---
T ss_pred ---------CEEEEEEccCCCCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCC---
Confidence 24899999999999999976 3568999999999999999999999999999999999999987
Q ss_pred CCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CC
Q 001142 969 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQ 1047 (1142)
Q Consensus 969 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt-G~ 1047 (1142)
+.+||+|||+++.+....... .......+|+.|+|||++.+ ..++.++|||||||++|||++ |+
T Consensus 506 ----~~~kL~DFGla~~~~~~~~~~-------~~~~~~~~t~~y~APE~~~~----~~~~~~sDvwSlGv~l~ellt~G~ 570 (635)
T 4fl3_A 506 ----HYAKISDFGLSKALRADENYY-------KAQTHGKWPVKWYAPECINY----YKFSSKSDVWSFGVLMWEAFSYGQ 570 (635)
T ss_dssp ----TEEEECCTTHHHHTTC--------------------CGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred ----CCEEEEEcCCccccccCcccc-------ccccCCCCceeeeChhhhcC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 789999999997654322110 11123346889999999976 568999999999999999998 99
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 001142 1048 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY 1127 (1142)
Q Consensus 1048 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL 1127 (1142)
.||.+....++...+..+..+..+. .+++.+.+||.+||+.||++|||+.+|+
T Consensus 571 ~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dP~~RPs~~~l~ 623 (635)
T 4fl3_A 571 KPYRGMKGSEVTAMLEKGERMGCPA---------------------------GCPREMYDLMNLCWTYDVENRPGFAAVE 623 (635)
T ss_dssp CSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence 9999988888887777665443221 4556799999999999999999999999
Q ss_pred HHHHh
Q 001142 1128 EMFVA 1132 (1142)
Q Consensus 1128 ~~L~~ 1132 (1142)
+.+..
T Consensus 624 ~~L~~ 628 (635)
T 4fl3_A 624 LRLRN 628 (635)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 230
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=340.80 Aligned_cols=272 Identities=21% Similarity=0.286 Sum_probs=183.8
Q ss_pred CcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001142 808 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 884 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~ 884 (1142)
+|++.++||+|+||.||+|++ .+..+|+|+.... .....+.+ .+|+.+++++. ||||+++++++.....
T Consensus 29 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~----~~e~~~l~~l~~h~~iv~~~~~~~~~~~ 100 (337)
T 3ll6_A 29 RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRAI----IQEVCFMKKLSGHPNIVQFCSAASIGKE 100 (337)
T ss_dssp EEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHHHH----HHHHHHHHHHTTSTTBCCEEEEEEECTT
T ss_pred eEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHHHH----HHHHHHHHHhccCCChhhcccccccccc
Confidence 699999999999999999998 5677888875322 22333333 79999999996 9999999999865332
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCCeee
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENILI 962 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g--IvHrDLKp~NILl 962 (1142)
. ........++||||+. |+|.+++..... ...+++..++.|+.||+.||.|||++| |+||||||+|||+
T Consensus 101 ~------~~~~~~~~~lv~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~ 171 (337)
T 3ll6_A 101 E------SDTGQAEFLLLTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL 171 (337)
T ss_dssp T------STTSSEEEEEEEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE
T ss_pred c------cccCCceEEEEEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE
Confidence 1 1122345799999996 899999976432 346999999999999999999999999 9999999999999
Q ss_pred ccccccCCCCCeEEEeecCCccccccccccccccc--CCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH--RGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~--~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
+.+ +.+||+|||++.............. ..........||+.|+|||++... ....++.++|||||||++
T Consensus 172 ~~~-------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~~~Dv~slG~il 243 (337)
T 3ll6_A 172 SNQ-------GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY-SNFPIGEKQDIWALGCIL 243 (337)
T ss_dssp CTT-------SCEEBCCCTTCBCCSSCC-------------------------------CC-TTSCSSHHHHHHHHHHHH
T ss_pred CCC-------CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhcc-ccCCCChHHhHHHHHHHH
Confidence 887 7899999999986543221100000 000111234589999999998421 135678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1041 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
|+|++|+.||............ ..... ....+..+.+|+.+||+.||.+|
T Consensus 244 ~el~~g~~p~~~~~~~~~~~~~---~~~~~---------------------------~~~~~~~~~~li~~~l~~~p~~R 293 (337)
T 3ll6_A 244 YLLCFRQHPFEDGAKLRIVNGK---YSIPP---------------------------HDTQYTVFHSLIRAMLQVNPEER 293 (337)
T ss_dssp HHHHHSSCCC---------------CCCCT---------------------------TCCSSGGGHHHHHHHSCSSGGGS
T ss_pred HHHHhCCCCCcchhHHHhhcCc---ccCCc---------------------------ccccchHHHHHHHHHccCChhhC
Confidence 9999999999754332221110 00000 00223348899999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001142 1121 PTAGDLYEMFVART 1134 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ 1134 (1142)
||+.|++++++...
T Consensus 294 ps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 294 LSIAEVVHQLQEIA 307 (337)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHH
Confidence 99999999988754
No 231
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.4e-36 Score=338.36 Aligned_cols=263 Identities=24% Similarity=0.375 Sum_probs=187.1
Q ss_pred CCCCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 804 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 804 ~~~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
..+.+|++.+.||+|+||.||+|.+. +..+|+|+.... . .......+ +..+..+++.++||||+++++++.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~-~~~~~~~~---~~~~~~~~~~~~h~~i~~~~~~~~~ 95 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS--G-NKEENKRI---LMDLDVVLKSHDCPYIVQCFGTFIT 95 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETT--S-CHHHHHHH---HHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccc--c-cchHHHHH---HHHHHHHHHhcCCCceeeEEEEEec
Confidence 34678999999999999999999984 677888886432 1 12222222 2445556788899999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-CccccCCCCCCe
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENI 960 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-gIvHrDLKp~NI 960 (1142)
.+ ..++||||+ ++.+..+.... ...+++..+..++.||+.||.|||++ ||+||||||+||
T Consensus 96 ~~--------------~~~lv~e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Ni 156 (318)
T 2dyl_A 96 NT--------------DVFIAMELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI 156 (318)
T ss_dssp SS--------------EEEEEECCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGE
T ss_pred CC--------------cEEEEEecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHE
Confidence 54 459999999 56666665542 34689999999999999999999995 999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVwSLGvi 1039 (1142)
|++.+ +.+||+|||++....... ......||+.|+|||++.... ....++.++||||||++
T Consensus 157 l~~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 218 (318)
T 2dyl_A 157 LLDER-------GQIKLCDFGISGRLVDDK-----------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218 (318)
T ss_dssp EECTT-------SCEEECCCTTC-------------------------CCTTCCHHHHC--------CCTHHHHHHHHHH
T ss_pred EECCC-------CCEEEEECCCchhccCCc-----------cccccCCCccccChhhcccccccccCCccccchhhHHHH
Confidence 99887 789999999996543321 112346899999999985321 12467899999999999
Q ss_pred HHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|+|++|+.||... ...+....+.....+..+.. ...++.+.+++.+||+.||.
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~l~~li~~~l~~dp~ 273 (318)
T 2dyl_A 219 LVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGH-------------------------MGFSGDFQSFVKDCLTKDHR 273 (318)
T ss_dssp HHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSS-------------------------SCCCHHHHHHHHHHTCSCTT
T ss_pred HHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCcc-------------------------CCCCHHHHHHHHHHccCChh
Confidence 99999999999863 34445555544433322110 03456799999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001142 1119 ERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ 1134 (1142)
+|||+.++++|+|++.
T Consensus 274 ~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 274 KRPKYNKLLEHSFIKR 289 (318)
T ss_dssp TSCCHHHHTTSHHHHH
T ss_pred HCcCHHHHhhCHHHHh
Confidence 9999999999999864
No 232
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.2e-36 Score=347.09 Aligned_cols=280 Identities=13% Similarity=0.098 Sum_probs=196.2
Q ss_pred CCCcceeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCCh-HHHHHh----HHhHHHHHHHHhhCCCCCccce
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSA-DEIRNF----EYSCLGEVRMLGALRHSCIVEM 875 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-----~~~vAvKi~~l~~~~~~~-~~~~~~----~~~~~~Ei~iL~~L~HpNIVkl 875 (1142)
-.+|++.+.||+|+||.||+|.+. +..+|+|+..... ... .+.+.+ ...+.+|+.+++.++||||+++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~ 113 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQEN--GPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF 113 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC---CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCC--cchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence 357999999999999999999984 4567888754321 111 111111 1234688999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 955 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDL 955 (1142)
++++..... .....++||||+ +++|.+++.. ...+++..++.|+.||+.||+|||++||+||||
T Consensus 114 ~~~~~~~~~----------~~~~~~lv~e~~-~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dl 177 (345)
T 2v62_A 114 YGSGLTEFK----------GRSYRFMVMERL-GIDLQKISGQ-----NGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDI 177 (345)
T ss_dssp EEEEEEESS----------SCEEEEEEEECE-EEEHHHHCBG-----GGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred ecccccccC----------CCcEEEEEEecc-CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCc
Confidence 999876210 123569999999 8999999865 237999999999999999999999999999999
Q ss_pred CCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001142 956 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1035 (1142)
Q Consensus 956 Kp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwS 1035 (1142)
||+|||++.+.. +.+||+|||+++.+........ ..........||+.|+|||++.+ ..++.++||||
T Consensus 178 kp~NIll~~~~~-----~~~kL~Dfg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~s 245 (345)
T 2v62_A 178 KAANLLLGYKNP-----DQVYLADYGLSYRYCPNGNHKQ---YQENPRKGHNGTIEFTSLDAHKG----VALSRRSDVEI 245 (345)
T ss_dssp SGGGEEEESSST-----TSEEECCCTTCEESSGGGCCCC---CCCCGGGCSCSCTTTCCHHHHHT----CCCCHHHHHHH
T ss_pred CHHHEEEccCCC-----CcEEEEeCCCceeccccccccc---chhccccccCCCccccCHHHhcC----CCCCchhhHHH
Confidence 999999987621 3899999999987643221100 00111134579999999999886 56899999999
Q ss_pred HHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001142 1036 YGCLLLELLTLQVPYMGL--SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1113 (1142)
Q Consensus 1036 LGviL~ELLtG~~Pf~~~--~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL 1113 (1142)
|||++|||++|+.||.+. ......... ....+.++...... . .....++.+.+++.+||
T Consensus 246 lG~il~ell~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------~-------~~~~~~~~l~~li~~~l 306 (345)
T 2v62_A 246 LGYCMLRWLCGKLPWEQNLKDPVAVQTAK-TNLLDELPQSVLKW-----------A-------PSGSSCCEIAQFLVCAH 306 (345)
T ss_dssp HHHHHHHHHHSSCTTGGGTTCHHHHHHHH-HHHHHTTTHHHHHH-----------S-------CTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCccccccccHHHHHHH-HhhcccccHHHHhh-----------c-------cccccHHHHHHHHHHHh
Confidence 999999999999999642 222222111 11111111111100 0 00145567999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhc
Q 001142 1114 EENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1114 ~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
+.||++|||+.+|++.+....
T Consensus 307 ~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 307 SLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp TCCTTCCCCHHHHHHHHCTTC
T ss_pred hcCcccCCCHHHHHHHHhccC
Confidence 999999999999999987654
No 233
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=345.66 Aligned_cols=265 Identities=14% Similarity=0.112 Sum_probs=197.0
Q ss_pred CCCcceeeeecccCceEEEEEEEC----------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccce
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG----------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 875 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~----------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl 875 (1142)
-.+|++.+.||+|+||.||+|++. +..+|+|+.... +.+ .+|+.++++++||||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~~----~~E~~~l~~l~h~niv~~ 107 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GRL----FNEQNFFQRAAKPLQVNK 107 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------STH----HHHHHHHHHHCCHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------chH----HHHHHHHHHhcccchhhh
Confidence 367999999999999999999984 567899886422 123 689999999999999984
Q ss_pred ---------------eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHH
Q 001142 876 ---------------YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAA 940 (1142)
Q Consensus 876 ---------------~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~ 940 (1142)
++++... ....++||||+ +++|.+++... ....+++..+..|+.||+.
T Consensus 108 ~~~~~~~~~~~i~~~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~ 170 (352)
T 2jii_A 108 WKKLYSTPLLAIPTCMGFGVHQ-------------DKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLD 170 (352)
T ss_dssp HHHHTTCTTCSCCCCCEEEEET-------------TTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHH
T ss_pred hhhhccCCccCccchhhccccC-------------CcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHH
Confidence 4444331 12569999999 89999999862 1246999999999999999
Q ss_pred HHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcc
Q 001142 941 ALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA 1020 (1142)
Q Consensus 941 gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 1020 (1142)
||.|||++||+||||||+|||++.++. ..+||+|||+++.+......... .........||+.|+|||++.+
T Consensus 171 ~L~~LH~~~ivH~Dikp~NIl~~~~~~-----~~~kl~Dfg~a~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~ 242 (352)
T 2jii_A 171 ALEFLHENEYVHGNVTAENIFVDPEDQ-----SQVTLAGYGFAFRYCPSGKHVAY---VEGSRSPHEGDLEFISMDLHKG 242 (352)
T ss_dssp HHHHHHHTTCBCSCCCGGGEEEETTEE-----EEEEECCGGGCBCSSGGGCCCCC---CTTSSCTTCSCTTTCCHHHHTT
T ss_pred HHHHHHhCCccCCCCCHHHEEEcCCCC-----ceEEEecCcceeeccCCCccccc---cccccccccCCccccCHHHHcc
Confidence 999999999999999999999987621 28999999999866543211100 0111234479999999999876
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHH--hCCCCCchhHHhhhcccccccccccCCCCCCch
Q 001142 1021 MHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLS--ELEIHDLIQ--MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE 1096 (1142)
Q Consensus 1021 ~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~--~~el~~~I~--~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 1096 (1142)
..++.++|||||||++|+|++|+.||.... ...+..... ....+.+... . .
T Consensus 243 ----~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~------~ 297 (352)
T 2jii_A 243 ----CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGP---------------C------G 297 (352)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECT---------------T------S
T ss_pred ----CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhh---------------c------c
Confidence 568899999999999999999999997643 322322221 1111111000 0 0
Q ss_pred hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001142 1097 AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1097 ~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.....++.+.+++.+||+.||.+|||++++++.+...
T Consensus 298 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 298 HWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp CEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHH
Confidence 0013456799999999999999999999999987654
No 234
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=9.3e-36 Score=336.23 Aligned_cols=277 Identities=18% Similarity=0.176 Sum_probs=201.3
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
-.+|++.+.||+|+||.||+|++ .+..+|+|+.... .....+.+ .+|+.++++++||||+++++++....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 99 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREEA----QREADMHRLFNHPNILRLVAYCLRER 99 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHHHH----HHHHHHHHTCCCTTBCCCCEEEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHHHH----HHHHHHHhhcCCCCeeeEEEEEEecc
Confidence 45799999999999999999997 5677888876432 23333344 79999999999999999999987422
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
. .....++||||+++++|.+++...... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 100 ~----------~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~ 168 (317)
T 2buj_A 100 G----------AKHEAWLLLPFFKRGTLWNEIERLKDK-GNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG 168 (317)
T ss_dssp T----------TEEEEEEEEECCTTCBHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred C----------CCceeEEEEEeCCCCcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc
Confidence 1 123569999999999999999874332 35799999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ +.+||+|||.+.............. .........||+.|+|||++.+.. ...++.++||||||+++|+|
T Consensus 169 ~~-------~~~kl~dfg~~~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~el 239 (317)
T 2buj_A 169 DE-------GQPVLMDLGSMNQACIHVEGSRQAL-TLQDWAAQRCTISYRAPELFSVQS-HCVIDERTDVWSLGCVLYAM 239 (317)
T ss_dssp TT-------SCEEECCCSSCEESCEEEESHHHHH-HHHHHHHHHSCGGGCCGGGSSCCS-EEEECTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEecCcchhcccccccccccc-cccccccccCCcccCCHhHhccCC-CcCCCchhhHHHHHHHHHHH
Confidence 77 7899999999875432110000000 000001234799999999986421 12367899999999999999
Q ss_pred HhCCCCCCCCCH--HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1044 LTLQVPYMGLSE--LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1044 LtG~~Pf~~~~~--~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
++|+.||..... ......+....... . ....+..+.+++.+||+.||.+||
T Consensus 240 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------------~---~~~~~~~l~~li~~~l~~dp~~Rp 292 (317)
T 2buj_A 240 MFGEGPYDMVFQKGDSVALAVQNQLSIP------------------------Q---SPRHSSALWQLLNSMMTVDPHQRP 292 (317)
T ss_dssp HHSSCTTHHHHHTTSCHHHHHHCC--CC------------------------C---CTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred HhCCCChhhhhcccchhhHHhhccCCCC------------------------c---cccCCHHHHHHHHHHhhcChhhCC
Confidence 999999953100 00111111110000 0 014456799999999999999999
Q ss_pred CHHHHHHHHHhhcCCC
Q 001142 1122 TAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~ss~ 1137 (1142)
|+.++++++.......
T Consensus 293 s~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 293 HIPLLLSQLEALQPPA 308 (317)
T ss_dssp CHHHHHHHHHHTCCCC
T ss_pred CHHHHHHHhhhcCCCC
Confidence 9999999998875543
No 235
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=337.57 Aligned_cols=274 Identities=23% Similarity=0.319 Sum_probs=199.4
Q ss_pred CCCcceeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 879 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~------~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~ 879 (1142)
..+|++.+.||+|+||.||+|++ .+..+|+|+.... .....+.+ .+|+.++++++||||+++++++
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~ 111 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDF----EREIEILKSLQHDNIVKYKGVC 111 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHH----HHHHHHHHTCCCTTBCCEEEEE
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHH----HHHHHHHHhCCCCCeeeEEEEE
Confidence 45699999999999999999985 4567888875421 22333344 7999999999999999999988
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 959 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~N 959 (1142)
...+. ...++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 112 ~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~N 175 (326)
T 2w1i_A 112 YSAGR------------RNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 175 (326)
T ss_dssp CC----------------CCEEEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred EecCC------------CceEEEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcce
Confidence 65331 1349999999999999999762 2468999999999999999999999999999999999
Q ss_pred eeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 960 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 960 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
||++.+ +.+||+|||++........... ......++..|+|||++.+ ..++.++||||||++
T Consensus 176 Ili~~~-------~~~kL~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 237 (326)
T 2w1i_A 176 ILVENE-------NRVKIGDFGLTKVLPQDKEYYK-------VKEPGESPIFWYAPESLTE----SKFSVASDVWSFGVV 237 (326)
T ss_dssp EEEEET-------TEEEECCCTTCEECCSSCSEEE-------CSSCCSCCGGGCCHHHHHH----CEEEHHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEecCcchhhccccccccc-------cccCCCCceeEECchhhcC----CCCCchhhHHHHHHH
Confidence 999887 7899999999976543221100 1123357888999999876 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCch-hHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1040 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLT-DELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
+|+|++|..||... ..+....+......... ..+.. .......... ...+++.+.+++.+||+.||.
T Consensus 238 l~el~tg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~ 305 (326)
T 2w1i_A 238 LYELFTYIEKSKSP-PAEFMRMIGNDKQGQMIVFHLIE--------LLKNNGRLPR---PDGCPDEIYMIMTECWNNNVN 305 (326)
T ss_dssp HHHHHHTTCGGGSH-HHHHHHHHCTTCCTHHHHHHHHH--------HHHTTCCCCC---CTTCCHHHHHHHHHHSCSSGG
T ss_pred HHHHHhcCCCCCCC-HHHHHHhhccccchhhhHHHHHH--------HhhcCCCCCC---CCcccHHHHHHHHHHcCCChh
Confidence 99999999998642 12222221111100000 00000 0000000000 114567899999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001142 1119 ERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~ 1133 (1142)
+|||+.|+++.+...
T Consensus 306 ~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 306 QRPSFRDLALRVDQI 320 (326)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999987654
No 236
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.4e-36 Score=350.16 Aligned_cols=277 Identities=14% Similarity=0.082 Sum_probs=182.2
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC--CCCCcccee------
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL--RHSCIVEMY------ 876 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L--~HpNIVkl~------ 876 (1142)
..|++.+.||+|+||+||+|++. +..+|+|+...... ......+. +.+|+.+++.+ +||||++++
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~----~~~E~~~~~~l~~~hp~iv~~~~~~~~p 136 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAE-NSRSELER----LHEATFAAARLLGESPEEARDRRRLLLP 136 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCST-THHHHHHH----HHHHHHHHHHHHC----------CBCCC
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccc-ccccHHHH----HHHHHHHHHHhcccChhhhhhceeEEee
Confidence 35899999999999999999984 66788888654321 11122223 36775444444 699988765
Q ss_pred -eeEecCCCCC---CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHH------HHHHHHHHHHHHHHH
Q 001142 877 -GHKISSKWLP---SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLA------LFIAQDVAAALVELH 946 (1142)
Q Consensus 877 -g~~~~~~~~~---~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i------~~Ia~qIa~gL~yLH 946 (1142)
+++...+.-. ..++.........++||||++ ++|.+++.... ..+++..+ ..++.||+.||+|||
T Consensus 137 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~LH 211 (371)
T 3q60_A 137 SDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANLQ 211 (371)
T ss_dssp CEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 3443322100 000000111245799999998 89999998632 12444455 677899999999999
Q ss_pred hCCccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001142 947 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1026 (1142)
Q Consensus 947 s~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1026 (1142)
++||+||||||+|||++.+ +.+||+|||+++....... ...+|+.|+|||++.+. ...
T Consensus 212 ~~~ivHrDikp~NIll~~~-------~~~kL~DFG~a~~~~~~~~-------------~~~~t~~y~aPE~~~~~--~~~ 269 (371)
T 3q60_A 212 SKGLVHGHFTPDNLFIMPD-------GRLMLGDVSALWKVGTRGP-------------ASSVPVTYAPREFLNAS--TAT 269 (371)
T ss_dssp HTTEEETTCSGGGEEECTT-------SCEEECCGGGEEETTCEEE-------------GGGSCGGGCCHHHHTCS--EEE
T ss_pred HCCCccCcCCHHHEEECCC-------CCEEEEecceeeecCCCcc-------------CccCCcCCcChhhccCC--CCC
Confidence 9999999999999999887 7899999999976543210 23467999999998641 246
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHH
Q 001142 1027 YGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1106 (1142)
Q Consensus 1027 ~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1106 (1142)
++.++|||||||++|||++|+.||.+....... .. ..... ..........+. ....++.+.
T Consensus 270 ~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~-~~---~~~~~--------------~~~~~~~~~~~~-~~~~~~~~~ 330 (371)
T 3q60_A 270 FTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG-SW---KRPSL--------------RVPGTDSLAFGS-CTPLPDFVK 330 (371)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT-CC---CBCCT--------------TSCCCCSCCCTT-SSCCCHHHH
T ss_pred cCccccHHHHHHHHHHHHhCCCCCCCcCccccc-ch---hhhhh--------------hhccccccchhh-ccCCCHHHH
Confidence 889999999999999999999999865321100 00 00000 000000000110 115567899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1107 DVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1107 dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
+|+.+||+.||++|||+.|+++|+|+..
T Consensus 331 ~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 358 (371)
T 3q60_A 331 TLIGRFLNFDRRRRLLPLEAMETPEFLQ 358 (371)
T ss_dssp HHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred HHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence 9999999999999999999999999974
No 237
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.2e-36 Score=346.23 Aligned_cols=264 Identities=25% Similarity=0.279 Sum_probs=176.4
Q ss_pred CCCcceee-eecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHH-HHHhhCCCCCccceeeeEec
Q 001142 806 FPSLSSCD-EAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEV-RMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 806 ~~~y~l~~-~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei-~iL~~L~HpNIVkl~g~~~~ 881 (1142)
.++|.+.+ +||+|+||+||+|.+. +..+|+|+.... ... .+|+ ..++.++||||+++++++..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~ 93 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKA--------RQEVDHHWQASGGPHIVCILDVYEN 93 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHH--------HHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHH--------HHHHHHHHHhcCCCChHHHHHHHhh
Confidence 35798854 6999999999999985 678888885321 111 2333 33566789999999999875
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
... .....++||||+++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 94 ~~~----------~~~~~~lv~e~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIl 160 (336)
T 3fhr_A 94 MHH----------GKRCLLIIMECMEGGELFSRIQE---RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160 (336)
T ss_dssp EET----------TEEEEEEEEECCTTEEHHHHHHT---C-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred ccC----------CCceEEEEEeccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 221 12246999999999999999975 23346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.++ ..+.+||+|||++....... .....||+.|+|||++.+ ..++.++||||||+++|
T Consensus 161 l~~~~----~~~~~kl~Dfg~~~~~~~~~------------~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~il~ 220 (336)
T 3fhr_A 161 YTSKE----KDAVLKLTDFGFAKETTQNA------------LQTPCYTPYYVAPEVLGP----EKYDKSCDMWSLGVIMY 220 (336)
T ss_dssp ESCSS----TTCCEEECCCTTCEEC--------------------------------------CHHHHHHHHHHHHHHHH
T ss_pred EEecC----CCceEEEeccccceeccccc------------cccCCCCcCccChhhhCC----CCCCchhhHHHHHHHHH
Confidence 97641 12679999999997543211 123468999999999865 56789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|++|..||.................. . ......+ .....++.+.+|+.+||+.||.+||
T Consensus 221 ~l~~g~~pf~~~~~~~~~~~~~~~~~~----~---------------~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rp 280 (336)
T 3fhr_A 221 ILLCGFPPFYSNTGQAISPGMKRRIRL----G---------------QYGFPNP-EWSEVSEDAKQLIRLLLKTDPTERL 280 (336)
T ss_dssp HHHHSSCCC----------------------------------------CCCTT-TSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred HHHHCCCCCCCccchhhhhhHHHhhhc----c---------------ccccCch-hhccCCHHHHHHHHHHCCCChhHCc
Confidence 999999999764433221111000000 0 0000000 0014567799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++|+|+...
T Consensus 281 t~~ell~hp~~~~~ 294 (336)
T 3fhr_A 281 TITQFMNHPWINQS 294 (336)
T ss_dssp CHHHHHHSHHHHTG
T ss_pred CHHHHhcCcccccc
Confidence 99999999999865
No 238
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.5e-36 Score=337.63 Aligned_cols=253 Identities=22% Similarity=0.260 Sum_probs=190.5
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC----CCCCccceeeeE
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL----RHSCIVEMYGHK 879 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L----~HpNIVkl~g~~ 879 (1142)
..+|++.+.||+|+||.||+|++ .+..+|+|+...... ...........+.+|+.++.++ +||||+++++++
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRV--LGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTT--C--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccc--cccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 35699999999999999999987 456788887543221 1110000111236799999888 899999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEec-cCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEY-VKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy-~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
...+.. ++|||| +.+++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+
T Consensus 108 ~~~~~~--------------~~v~e~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~ 168 (312)
T 2iwi_A 108 ETQEGF--------------MLVLERPLPAQDLFDYITE-----KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDE 168 (312)
T ss_dssp -----C--------------EEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGG
T ss_pred ecCCeE--------------EEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChh
Confidence 765533 999999 788999999986 236899999999999999999999999999999999
Q ss_pred Ceeec-cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 959 NILID-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 959 NILld-~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
||+++ .+ +.+||+|||++....... .....||+.|+|||++.+. ..++.++||||||
T Consensus 169 Nil~~~~~-------~~~kl~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG 226 (312)
T 2iwi_A 169 NILIDLRR-------GCAKLIDFGSGALLHDEP------------YTDFDGTRVYSPPEWISRH---QYHALPATVWSLG 226 (312)
T ss_dssp GEEEETTT-------TEEEECCCSSCEECCSSC------------BCCCCSCTTTSCHHHHHHS---CBCHHHHHHHHHH
T ss_pred hEEEeCCC-------CeEEEEEcchhhhcccCc------------ccccCCcccccCceeeecC---CCCCccchHHHHH
Confidence 99998 44 789999999997654321 1234589999999998751 2335689999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1038 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+++|+|++|+.||... .+ +..... ..+ ...+..+.+++.+||+.||
T Consensus 227 ~il~~l~~g~~pf~~~--~~----~~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~~p 272 (312)
T 2iwi_A 227 ILLYDMVCGDIPFERD--QE----ILEAEL-HFP---------------------------AHVSPDCCALIRRCLAPKP 272 (312)
T ss_dssp HHHHHHHHSSCSCCSH--HH----HHHTCC-CCC---------------------------TTSCHHHHHHHHHHTCSST
T ss_pred HHHHHHHHCCCCCCCh--HH----Hhhhcc-CCc---------------------------ccCCHHHHHHHHHHccCCh
Confidence 9999999999999742 11 111110 000 1345678999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001142 1118 TERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~s 1135 (1142)
++|||+.|+++|+|++..
T Consensus 273 ~~Rps~~e~l~~~~~~~~ 290 (312)
T 2iwi_A 273 SSRPSLEEILLDPWMQTP 290 (312)
T ss_dssp TTSCCHHHHHHSTTTCC-
T ss_pred hhCcCHHHHhcChhhcCc
Confidence 999999999999999865
No 239
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.2e-36 Score=342.13 Aligned_cols=251 Identities=21% Similarity=0.231 Sum_probs=197.5
Q ss_pred CCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCCh--HHHHHhHHhHHHHHHHHhhCC--CCCccceeeeE
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSA--DEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHK 879 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~--~~~~~~~~~~~~Ei~iL~~L~--HpNIVkl~g~~ 879 (1142)
..+|++.+.||+|+||.||+|.+ .+..+|+|+.......... ...+.+ .+|+.++++++ ||||+++++++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~----~~E~~~l~~l~~~~~~i~~~~~~~ 117 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRV----PMEVVLLKKVSSGFSGVIRLLDWF 117 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEE----EHHHHHHHHHCSSSCSBCCEEEEE
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHH----HHHHHHHHhhccCCCCceEEEEEE
Confidence 45799999999999999999988 4667888886544321100 111223 68999999996 69999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeccCC-CCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCC
Q 001142 880 ISSKWLPSADGNPEHHLLQSAIFMEYVKG-GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 958 (1142)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~LVmEy~~g-gSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~ 958 (1142)
...+ ..++||||+.+ ++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+
T Consensus 118 ~~~~--------------~~~lv~e~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~ 178 (320)
T 3a99_A 118 ERPD--------------SFVLILERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDE 178 (320)
T ss_dssp ECSS--------------EEEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred ecCC--------------cEEEEEEcCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHH
Confidence 8654 34999999976 899999976 246899999999999999999999999999999999
Q ss_pred Ceeec-cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001142 959 NILID-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1037 (1142)
Q Consensus 959 NILld-~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLG 1037 (1142)
|||++ .+ +.+||+|||++....... .....||+.|+|||++.+ ...++.++||||||
T Consensus 179 NIll~~~~-------~~~kL~Dfg~~~~~~~~~------------~~~~~gt~~y~aPE~~~~---~~~~~~~~Di~slG 236 (320)
T 3a99_A 179 NILIDLNR-------GELKLIDFGSGALLKDTV------------YTDFDGTRVYSPPEWIRY---HRYHGRSAAVWSLG 236 (320)
T ss_dssp GEEEETTT-------TEEEECCCTTCEECCSSC------------BCCCCSCGGGSCHHHHHH---SCBCHHHHHHHHHH
T ss_pred HEEEeCCC-------CCEEEeeCcccccccccc------------ccCCCCCccCCChHHhcc---CCCCCccchHHhHH
Confidence 99998 44 789999999997654321 113458999999999876 23346889999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001142 1038 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1117 (1142)
Q Consensus 1038 viL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP 1117 (1142)
+++|||++|+.||... .. +...... . ....++.+.+|+.+||+.||
T Consensus 237 ~il~el~~g~~pf~~~--~~----~~~~~~~-~---------------------------~~~~~~~~~~li~~~l~~dp 282 (320)
T 3a99_A 237 ILLYDMVCGDIPFEHD--EE----IIRGQVF-F---------------------------RQRVSSECQHLIRWCLALRP 282 (320)
T ss_dssp HHHHHHHHSSCSCCSH--HH----HHHCCCC-C---------------------------SSCCCHHHHHHHHHHTCSSG
T ss_pred HHHHHHHHCCCCCCCh--hh----hhccccc-c---------------------------cccCCHHHHHHHHHHccCCh
Confidence 9999999999999752 11 1111100 0 01345679999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001142 1118 TERPTAGDLYEMFVARTS 1135 (1142)
Q Consensus 1118 ~~RPSa~EVL~~L~~~~s 1135 (1142)
++|||++|+++|+|+...
T Consensus 283 ~~Rps~~~ll~hp~~~~~ 300 (320)
T 3a99_A 283 SDRPTFEEIQNHPWMQDV 300 (320)
T ss_dssp GGSCCHHHHHTSGGGSSC
T ss_pred hhCcCHHHHhcCHhhcCc
Confidence 999999999999999754
No 240
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=2.9e-35 Score=366.47 Aligned_cols=257 Identities=21% Similarity=0.339 Sum_probs=202.2
Q ss_pred CCCcceeeeecccCceEEEEEEECC---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGS---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 882 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~---~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~ 882 (1142)
..+|++.+.||+|+||.||+|.+.. ...+++++..+.. ......+. +.+|+.++++++||||+++++++.+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~----~~~E~~~l~~l~HpnIv~l~~~~~~- 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREK----FLQEALTMRQFDHPHIVKLIGVITE- 462 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEECS-
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHH----HHHHHHHHHhCCCCCCCeEEEEEec-
Confidence 3569999999999999999999842 2233444434322 22232333 4899999999999999999999853
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
+ ..++||||+++|+|.++++. ....+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 463 ~--------------~~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl 524 (656)
T 2j0j_A 463 N--------------PVWIIMELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524 (656)
T ss_dssp S--------------SCEEEEECCTTCBHHHHHHH----TTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred C--------------ceEEEEEcCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEE
Confidence 2 23899999999999999975 23468999999999999999999999999999999999999
Q ss_pred ccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001142 963 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1042 (1142)
Q Consensus 963 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~E 1042 (1142)
+.+ +.+||+|||+++........ ......+|+.|+|||++.+ ..++.++|||||||++||
T Consensus 525 ~~~-------~~vkL~DFG~a~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwSlG~il~e 584 (656)
T 2j0j_A 525 SSN-------DCVKLGDFGLSRYMEDSTYY---------KASKGKLPIKWMAPESINF----RRFTSASDVWMFGVCMWE 584 (656)
T ss_dssp EET-------TEEEECCCCCCCSCCC-------------------CCGGGCCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred eCC-------CCEEEEecCCCeecCCCcce---------eccCCCCCcceeCHHHhcC----CCCCchhhHHHHHHHHHH
Confidence 987 78999999999765432111 1123357889999999976 568899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1043 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1043 LLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
|++ |..||.+....+....+..+..+..+. .+++.+.+++.+||+.||.+||
T Consensus 585 llt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dP~~RP 637 (656)
T 2j0j_A 585 ILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------------------NCPPTLYSLMTKCWAYDPSRRP 637 (656)
T ss_dssp HHTTSCCTTTTCCHHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHcCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cccHHHHHHHHHHcCCChhHCc
Confidence 997 999999888877777776554433221 4456799999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001142 1122 TAGDLYEMFVAR 1133 (1142)
Q Consensus 1122 Sa~EVL~~L~~~ 1133 (1142)
|+.++++++...
T Consensus 638 s~~el~~~L~~i 649 (656)
T 2j0j_A 638 RFTELKAQLSTI 649 (656)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999987654
No 241
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.1e-35 Score=343.83 Aligned_cols=256 Identities=14% Similarity=0.145 Sum_probs=191.2
Q ss_pred CCCcceeeeecccCceEEEEEE-------ECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC---CCCccce
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCK-------FGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEM 875 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~-------~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~---HpNIVkl 875 (1142)
-.+|++.++||+|+||+||+|. ..+..+|+|+.... . ..++ .+|+.++..++ |+||+++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~---~~~~----~~e~~~~~~l~~~~~~~iv~~ 132 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----N---PWEF----YIGTQLMERLKPSMQHMFMKF 132 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----C---HHHH----HHHHHHHHHSCGGGGGGBCCE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----C---hhHH----HHHHHHHHHhhhhhhhhhhhh
Confidence 3569999999999999999994 25678899985321 1 1223 57888888886 9999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCC
Q 001142 876 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 955 (1142)
Q Consensus 876 ~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDL 955 (1142)
++++...+. .++||||+++|+|.+++..........+++..+..|+.||+.||+|||++||+||||
T Consensus 133 ~~~~~~~~~--------------~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDi 198 (365)
T 3e7e_A 133 YSAHLFQNG--------------SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDI 198 (365)
T ss_dssp EEEEECSSC--------------EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred heeeecCCC--------------cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCC
Confidence 999987653 499999999999999998755444567999999999999999999999999999999
Q ss_pred CCCCeeeccccc----cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchh
Q 001142 956 KSENILIDLERK----KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1031 (1142)
Q Consensus 956 Kp~NILld~~~~----~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1031 (1142)
||+|||++.... .....+.+||+|||+|+.+....... ......||+.|+|||++.+ ..|+.++
T Consensus 199 Kp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~----~~~~~~~ 266 (365)
T 3e7e_A 199 KPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT--------IFTAKCETSGFQCVEMLSN----KPWNYQI 266 (365)
T ss_dssp SGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTE--------EECCSSCTTSCCCHHHHTT----CCBSTHH
T ss_pred CHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCc--------eeeeecCCCCCCChHHhcC----CCCCccc
Confidence 999999987100 00112789999999997654221110 1123469999999999976 5689999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001142 1032 DIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1111 (1142)
Q Consensus 1032 DVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~ 1111 (1142)
|||||||++|||++|+.||........ ........ ....+.+.+++..
T Consensus 267 DiwslG~il~elltg~~pf~~~~~~~~-------------------------~~~~~~~~-------~~~~~~~~~~~~~ 314 (365)
T 3e7e_A 267 DYFGVAATVYCMLFGTYMKVKNEGGEC-------------------------KPEGLFRR-------LPHLDMWNEFFHV 314 (365)
T ss_dssp HHHHHHHHHHHHHHSSCCCEEEETTEE-------------------------EECSCCTT-------CSSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCccccCCCCce-------------------------eechhccc-------cCcHHHHHHHHHH
Confidence 999999999999999999964211000 00000000 0235568899999
Q ss_pred hcccCCCCCC-CHHHHHHHH
Q 001142 1112 CTEENPTERP-TAGDLYEMF 1130 (1142)
Q Consensus 1112 CL~~DP~~RP-Sa~EVL~~L 1130 (1142)
||+.+|.+|+ ++.++.+.+
T Consensus 315 ~l~~~p~~r~~~~~~l~~~l 334 (365)
T 3e7e_A 315 MLNIPDCHHLPSLDLLRQKL 334 (365)
T ss_dssp HHCCCCTTCCCCHHHHHHHH
T ss_pred HcCCCCCCcchHHHHHHHHH
Confidence 9999999995 666555433
No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=9.2e-36 Score=353.39 Aligned_cols=262 Identities=22% Similarity=0.299 Sum_probs=190.7
Q ss_pred CcceeeeecccCceE-EEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCC
Q 001142 808 SLSSCDEAGKSVSSS-LFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 808 ~y~l~~~LG~GsfG~-Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~ 885 (1142)
+|.+.++||+|+||+ ||++.+.+..||||+..... ...+ .+|+.+++++ +|||||++++++.+..
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~-------~~~~----~~E~~~l~~l~~HpnIv~l~~~~~~~~-- 91 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC-------FSFA----DREVQLLRESDEHPNVIRYFCTEKDRQ-- 91 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT-------EEEC----HHHHHHHHHSCCCTTBCCEEEEEEETT--
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH-------HHHH----HHHHHHHHhccCCCCcCeEEEEEecCC--
Confidence 489999999999998 55666788899999863211 1122 5899999999 7999999999988655
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
..|+||||++ |+|.+++.. ....+.+..+..|+.||+.||.|||++||+||||||+|||++.+
T Consensus 92 ------------~~~lv~E~~~-g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~ 154 (432)
T 3p23_A 92 ------------FQYIAIELCA-ATLQEYVEQ----KDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP 154 (432)
T ss_dssp ------------EEEEEEECCS-EEHHHHHHS----SSCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCC
T ss_pred ------------EEEEEEECCC-CCHHHHHHh----cCCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecC
Confidence 3499999997 799999875 22345555678999999999999999999999999999999643
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+ ..+...+||+|||+|+........ ........||+.|+|||++.+.. ...++.++|||||||++|||++
T Consensus 155 ~--~~~~~~~kL~DFG~a~~~~~~~~~-------~~~~~~~~gt~~y~APE~l~~~~-~~~~t~~~DiwSlG~il~ellt 224 (432)
T 3p23_A 155 N--AHGKIKAMISDFGLCKKLAVGRHS-------FSRRSGVPGTEGWIAPEMLSEDC-KENPTYTVDIFSAGCVFYYVIS 224 (432)
T ss_dssp B--TTTBCCEEECCTTEEECC-------------------CCSCTTSCCGGGTSCC----CCCTHHHHHHHHHHHHHHHT
T ss_pred C--CCCceeEEEecccceeeccCCCcc-------eeeccccCCCcCccChhhhhccc-ccCCCcHHHHHHHHHHHHHHHc
Confidence 1 122357899999999765432111 01122456999999999987421 2456789999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001142 1046 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1124 (1142)
Q Consensus 1046 -G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~ 1124 (1142)
|..||...........+....... .......+..+.+||.+||+.||.+|||+.
T Consensus 225 ~g~~pf~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 279 (432)
T 3p23_A 225 EGSHPFGKSLQRQANILLGACSLDC-------------------------LHPEKHEDVIARELIEKMIAMDPQKRPSAK 279 (432)
T ss_dssp TSCBTTBSTTTHHHHHHTTCCCCTT-------------------------SCTTCHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCCCCcchhhHHHHHHHhccCCccc-------------------------cCccccccHHHHHHHHHHHhCCHhhCCCHH
Confidence 999997544333222211111000 000114456689999999999999999999
Q ss_pred HHHHHHHhhc
Q 001142 1125 DLYEMFVART 1134 (1142)
Q Consensus 1125 EVL~~L~~~~ 1134 (1142)
||++|+|+..
T Consensus 280 evl~hp~f~~ 289 (432)
T 3p23_A 280 HVLKHPFFWS 289 (432)
T ss_dssp HHHTSTTTCC
T ss_pred HHHhCccccC
Confidence 9999999853
No 243
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.7e-34 Score=347.05 Aligned_cols=261 Identities=18% Similarity=0.213 Sum_probs=195.7
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCC-CccceeeeEecC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS-CIVEMYGHKISS 882 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp-NIVkl~g~~~~~ 882 (1142)
.++|++.++||+|+||.||+|++. +..||||+...+... ..+ .+|+.+++.++|+ +|..+..++...
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~~----~~E~~il~~L~~~~~i~~i~~~~~~~ 75 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------PQL----LYESKIYRILQGGTGIPNVRWFGVEG 75 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------CCH----HHHHHHHHHTTTSTTCCCEEEEEEET
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------HHH----HHHHHHHHHhcCCCCCCeEEEEEeeC
Confidence 467999999999999999999974 778899986544221 123 6899999999865 455554444433
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeee
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 962 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILl 962 (1142)
. ..+|||||+ +++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+||||
T Consensus 76 ~--------------~~~lvme~~-g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl 136 (483)
T 3sv0_A 76 D--------------YNVLVMDLL-GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLM 136 (483)
T ss_dssp T--------------EEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred C--------------EEEEEEECC-CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEE
Confidence 3 459999999 89999999752 3469999999999999999999999999999999999999
Q ss_pred c---cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001142 963 D---LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1039 (1142)
Q Consensus 963 d---~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi 1039 (1142)
+ .+ +.+||+|||+++.+........ ..........||+.|+|||++.+ ..++.++|||||||+
T Consensus 137 ~~~~~~-------~~vkL~DFGla~~~~~~~~~~~---~~~~~~~~~~gt~~Y~aPE~~~~----~~~s~~sDvwSlGvi 202 (483)
T 3sv0_A 137 GLGRRA-------NQVYIIDFGLAKKYRDTSTHQH---IPYRENKNLTGTARYASVNTHLG----IEQSRRDDLESLGYV 202 (483)
T ss_dssp CCGGGT-------TCEEECCCTTCEECBCTTTCCB---CCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHH
T ss_pred ecCCCC-------CeEEEEeCCcceeccCCccccc---cccccccccCCCccccCHHHhcC----CCCChHHHHHHHHHH
Confidence 4 44 7899999999987654321110 01112335679999999999886 568899999999999
Q ss_pred HHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001142 1040 LLELLTLQVPYMGLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1116 (1142)
Q Consensus 1040 L~ELLtG~~Pf~~~~~---~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~D 1116 (1142)
+|||++|+.||.+... .+.+..+.......... .....+++++.+|+..||+.|
T Consensus 203 l~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~-----------------------~l~~~~p~~l~~li~~cl~~d 259 (483)
T 3sv0_A 203 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE-----------------------ALCRGYPTEFASYFHYCRSLR 259 (483)
T ss_dssp HHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH-----------------------HHHTTSCHHHHHHHHHHHTCC
T ss_pred HHHHHhCCCCCccccchhHHHHHHHHhhccccccHH-----------------------HHhcCCcHHHHHHHHHHhcCC
Confidence 9999999999986433 22333322111000000 001145677999999999999
Q ss_pred CCCCCCHHHHHHHHHh
Q 001142 1117 PTERPTAGDLYEMFVA 1132 (1142)
Q Consensus 1117 P~~RPSa~EVL~~L~~ 1132 (1142)
|++||++.+|++.+..
T Consensus 260 P~~RPs~~el~~~L~~ 275 (483)
T 3sv0_A 260 FDDKPDYSYLKRLFRD 275 (483)
T ss_dssp TTCCCCHHHHHHHHHH
T ss_pred hhhCcCHHHHHHHHHH
Confidence 9999999999887654
No 244
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=3.8e-35 Score=348.14 Aligned_cols=270 Identities=21% Similarity=0.271 Sum_probs=188.1
Q ss_pred cceeeeecccCceEEEEE-EECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCC
Q 001142 809 LSSCDEAGKSVSSSLFRC-KFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLP 886 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a-~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~~ 886 (1142)
|.+.+.||+|+||+||.+ ...+..||||+...+. .+. +.+|+.+++++ +|||||++++++.+..
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-------~~~----~~~E~~~l~~l~~HpnIv~~~~~~~~~~--- 82 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-------CDI----ALMEIKLLTESDDHPNVIRYYCSETTDR--- 82 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-------HHH----HHHHHHHHHHHTTSTTBCCEEEEEECSS---
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-------HHH----HHHHHHHHHhccCCCCcCeEEEEEecCC---
Confidence 567899999999999654 4578889999864321 122 36899999876 8999999999987654
Q ss_pred CCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCC--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 887 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGE--KHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 887 ~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~--~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..++||||+. |+|.+++........ ...++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 83 -----------~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~ 150 (434)
T 2rio_A 83 -----------FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150 (434)
T ss_dssp -----------EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEC
T ss_pred -----------eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEec
Confidence 4599999996 799999975211110 01133356789999999999999999999999999999976
Q ss_pred ccc------cCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc---CCCCCCchhhHHH
Q 001142 965 ERK------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLEVDIWS 1035 (1142)
Q Consensus 965 ~~~------~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~~s~ksDVwS 1035 (1142)
++. .......+||+|||+++......... ........||+.|+|||++.+.. ....++.++||||
T Consensus 151 ~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwS 224 (434)
T 2rio_A 151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF------RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224 (434)
T ss_dssp CHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHH
T ss_pred CcccccccccCCCceEEEEcccccceecCCCCccc------eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHh
Confidence 420 01223689999999998754322110 00112346999999999986521 1246889999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001142 1036 YGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1114 (1142)
Q Consensus 1036 LGviL~ELLt-G~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~ 1114 (1142)
|||++|||++ |+.||......+ ..+..+...... . ........++.+.+++.+||+
T Consensus 225 lG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~~~--------------------~-~~~~~~~~~~~~~~li~~~L~ 281 (434)
T 2rio_A 225 MGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSLDE--------------------M-KCLHDRSLIAEATDLISQMID 281 (434)
T ss_dssp HHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCCCC--------------------C-TTCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCccc--------------------c-cccccccchHHHHHHHHHHhh
Confidence 9999999999 999997644332 122221110000 0 000012567789999999999
Q ss_pred cCCCCCCCHHHHHHHHHhh
Q 001142 1115 ENPTERPTAGDLYEMFVAR 1133 (1142)
Q Consensus 1115 ~DP~~RPSa~EVL~~L~~~ 1133 (1142)
.||.+|||+.||++|+|+.
T Consensus 282 ~dP~~Rps~~eil~hp~f~ 300 (434)
T 2rio_A 282 HDPLKRPTAMKVLRHPLFW 300 (434)
T ss_dssp SSGGGSCCHHHHHTSGGGS
T ss_pred CChhhCCCHHHHHhCCccC
Confidence 9999999999999999985
No 245
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=2.6e-34 Score=322.78 Aligned_cols=245 Identities=22% Similarity=0.241 Sum_probs=181.8
Q ss_pred CCCccee-eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHH-hhCCCCCccceeeeEec
Q 001142 806 FPSLSSC-DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRML-GALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 806 ~~~y~l~-~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL-~~L~HpNIVkl~g~~~~ 881 (1142)
+++|.+. +.||+|+||.||+|.+ .+..+|+|+.... ..+ .+|+.++ +.++||||+++++++..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~~----~~e~~~~~~~~~h~~i~~~~~~~~~ 82 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PKA----RREVELHWRASQCPHIVRIVDVYEN 82 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HHH----HHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---------HHH----HHHHHHHHHhccCCCchhHHhhhhh
Confidence 5678887 7899999999999998 4667888875311 122 5788888 55689999999999875
Q ss_pred CCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCee
Q 001142 882 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 961 (1142)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NIL 961 (1142)
.. ......++||||+++++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 83 ~~----------~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil 149 (299)
T 3m2w_A 83 LY----------AGRKCLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149 (299)
T ss_dssp EE----------TTEEEEEEEECCCCSCBHHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred hc----------CCCceEEEEEeecCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 11 012256999999999999999986 23346999999999999999999999999999999999999
Q ss_pred eccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001142 962 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1041 (1142)
Q Consensus 962 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ 1041 (1142)
++.+. ..+.+||+|||++..... ..++.++|||||||++|
T Consensus 150 ~~~~~----~~~~~kl~Dfg~a~~~~~------------------------------------~~~~~~~DiwslG~il~ 189 (299)
T 3m2w_A 150 YTSKR----PNAILKLTDFGFAKETTG------------------------------------EKYDKSCDMWSLGVIMY 189 (299)
T ss_dssp ESSSS----TTCCEEECCCTTCEECTT------------------------------------CGGGGHHHHHHHHHHHH
T ss_pred EecCC----CCCcEEEecccccccccc------------------------------------ccCCchhhHHHHHHHHH
Confidence 98731 127899999999853210 23458999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCc-hhhhhhHHHHHHHHHHhcccCCCCC
Q 001142 1042 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKP-EAELETLSFLVDVFRRCTEENPTER 1120 (1142)
Q Consensus 1042 ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~dLI~~CL~~DP~~R 1120 (1142)
+|++|+.||.+.........+.... . . .....+ ......++.+.+++.+||+.||.+|
T Consensus 190 el~tg~~pf~~~~~~~~~~~~~~~~----~---------------~--~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 248 (299)
T 3m2w_A 190 ILLCGYPPFYSNHGLAISPGMKTRI----R---------------M--GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR 248 (299)
T ss_dssp HHHHSSCSCCC-------CCSCCSS----C---------------T--TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHCCCCCCCCcchhhhHHHHHHH----h---------------h--ccccCCchhcccCCHHHHHHHHHHcccChhhC
Confidence 9999999997644322111100000 0 0 000001 0112567789999999999999999
Q ss_pred CCHHHHHHHHHhhcCCC
Q 001142 1121 PTAGDLYEMFVARTSSS 1137 (1142)
Q Consensus 1121 PSa~EVL~~L~~~~ss~ 1137 (1142)
||+.|+++|+|+.....
T Consensus 249 ps~~e~l~hp~~~~~~~ 265 (299)
T 3m2w_A 249 MTITEFMNHPWIMQSTK 265 (299)
T ss_dssp CCHHHHHTSHHHHTGGG
T ss_pred CCHHHHhcChhhccccc
Confidence 99999999999986643
No 246
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=2.8e-35 Score=336.26 Aligned_cols=270 Identities=17% Similarity=0.118 Sum_probs=185.7
Q ss_pred CCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCC----ChHHHHHhHHhHHHHHHHHhhCC---------CCCc
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGS----SADEIRNFEYSCLGEVRMLGALR---------HSCI 872 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~----~~~~~~~~~~~~~~Ei~iL~~L~---------HpNI 872 (1142)
..+|++.++||+|+||+||+|++.+..||+|+........ .....+. +.+|+.+++.++ ||||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~----~~~E~~~l~~l~~l~~~~~~~h~ni 94 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEE----ILPEIIISKELSLLSGEVCNRTEGF 94 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHH----HHHHHHHHHHHHHGGGCSSSBCCCB
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHH----HHHHHHHHHHHHHhhccccccCCch
Confidence 3569999999999999999999999999999976543211 1111123 368888888775 6666
Q ss_pred cceeeeE-----------------ecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHH
Q 001142 873 VEMYGHK-----------------ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIA 935 (1142)
Q Consensus 873 Vkl~g~~-----------------~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia 935 (1142)
|++++.+ .+.... ..+........+.|+||||+++|++.+.+.+ ..+++..++.|+
T Consensus 95 v~l~~~~~~~~~~hp~iv~~~~~~~~~~~~-~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~ 167 (336)
T 2vuw_A 95 IGLNSVHCVQGSYPPLLLKAWDHYNSTKGS-ANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSIL 167 (336)
T ss_dssp CCEEEEEEEESSCCHHHHHHHHHHHHHTCC-SSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHH
T ss_pred hhhcceeEecCCCcHHHHHHHHHHhhhccc-cccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHH
Confidence 6665543 321000 0000000012367999999999976655532 458999999999
Q ss_pred HHHHHHHHHHH-hCCccccCCCCCCeeecccccc-------------CCCCCeEEEeecCCcccccccccccccccCCCC
Q 001142 936 QDVAAALVELH-SKHIMHRDIKSENILIDLERKK-------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIP 1001 (1142)
Q Consensus 936 ~qIa~gL~yLH-s~gIvHrDLKp~NILld~~~~~-------------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~ 1001 (1142)
.||+.||+||| ++||+||||||+|||++.++.. ......+||+|||+|+.....
T Consensus 168 ~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------------ 235 (336)
T 2vuw_A 168 HQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------------ 235 (336)
T ss_dssp HHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------------
T ss_pred HHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------------
Confidence 99999999999 9999999999999999876200 000128999999999765421
Q ss_pred CCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCH-HHHHHHHHhC-CCCCchhHHhhhc
Q 001142 1002 APDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL-LLELLTLQVPYMGLSE-LEIHDLIQMG-KRPRLTDELEALG 1078 (1142)
Q Consensus 1002 ~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGvi-L~ELLtG~~Pf~~~~~-~el~~~I~~~-~~p~l~~~l~~~~ 1078 (1142)
...||+.|+|||++.+ .. +.++||||+|++ .+++++|..||.+... ......+... ....
T Consensus 236 ---~~~gt~~y~aPE~~~g----~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------- 298 (336)
T 2vuw_A 236 ---IVVFCDVSMDEDLFTG----DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT--------- 298 (336)
T ss_dssp ---EEECCCCTTCSGGGCC----CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS---------
T ss_pred ---cEEEeecccChhhhcC----CC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc---------
Confidence 3469999999999976 22 789999998777 7778889998853111 1122222211 1100
Q ss_pred ccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH-HHHHhh
Q 001142 1079 SCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY-EMFVAR 1133 (1142)
Q Consensus 1079 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa~EVL-~~L~~~ 1133 (1142)
..........++++.+||.+||+.| ||+|++ +|+|++
T Consensus 299 -------------~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 299 -------------KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp -------------CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred -------------ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 0011122367888999999999976 999999 999984
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=8.9e-35 Score=358.51 Aligned_cols=290 Identities=19% Similarity=0.188 Sum_probs=199.0
Q ss_pred CCCCCCcceeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001142 803 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 880 (1142)
Q Consensus 803 ~~~~~~y~l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~ 880 (1142)
...+.+|++.++||+|+||+||+|.+ .+..||+|+.... ......+.+ .+|+.++++++||||+++++++.
T Consensus 10 g~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~---~~~~~~~~~----~~Ei~iL~~L~HpnIV~l~~v~~ 82 (676)
T 3qa8_A 10 TQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRERW----CLEIQIMKKLNHPNVVSAREVPD 82 (676)
T ss_dssp -------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC---CCHHHHHHH----HHHHHHHHHCCBTTBCCEEECCT
T ss_pred CCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc---CCHHHHHHH----HHHHHHHHhCCCCCCCceeeeec
Confidence 44567899999999999999999987 4677888874321 223333344 79999999999999999999876
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCe
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 960 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NI 960 (1142)
..... ......++||||+++++|.+++... .....+++..+..|+.||+.||.|||++||+||||||+||
T Consensus 83 ~~~~~--------~~~~~~~LVmEy~~ggsL~~~L~~~--~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NI 152 (676)
T 3qa8_A 83 GLQKL--------APNDLPLLAMEYCEGGDLRKYLNQF--ENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENI 152 (676)
T ss_dssp TTCCC--------CTTSSCCCEEECCSSCBHHHHHHSS--SCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTE
T ss_pred ccccc--------cCCCeEEEEEEeCCCCCHHHHHHhc--ccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHe
Confidence 52211 1122458999999999999999752 2223689999999999999999999999999999999999
Q ss_pred eeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001142 961 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1040 (1142)
Q Consensus 961 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL 1040 (1142)
|++.++ ....+||+|||.+....... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 153 Ll~~~g----~~~~vKL~DFG~a~~~~~~~-----------~~~~~~gt~~Y~APE~l~~----~~~s~ksDIwSLGviL 213 (676)
T 3qa8_A 153 VLQPGP----QRLIHKIIDLGYAKELDQGE-----------LCTEFVGTLQYLAPELLEQ----KKYTVTVDYWSFGTLA 213 (676)
T ss_dssp EEECCS----SSCEEEECSCCCCCBTTSCC-----------CCCCCCSCCTTCSSCSSCC----SCCSTTHHHHHHHHHH
T ss_pred EeecCC----CceeEEEccccccccccccc-----------ccccccCCcccCChHHhcc----CCCCchhHHHHHHHHH
Confidence 998652 12469999999997654321 1123468999999999875 5788999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhcccccccccccCCCCC-CchhhhhhHHHHHHHHHHhcccCCC
Q 001142 1041 LELLTLQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE-KPEAELETLSFLVDVFRRCTEENPT 1118 (1142)
Q Consensus 1041 ~ELLtG~~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~dLI~~CL~~DP~ 1118 (1142)
|+|++|..||.+....... ..+........ ................. ........++.+.+++.+||..||+
T Consensus 214 yeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~------~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~ 287 (676)
T 3qa8_A 214 FECITGFRPFLPNWQPVQWHGKVREKSNEHI------VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQR 287 (676)
T ss_dssp HHHHSSCSSCCSSCHHHHSSTTCC------C------CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC
T ss_pred HHHHHCCCCCCcccchhhhhhhhhcccchhh------hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHh
Confidence 9999999999764332110 00000000000 00000000000000000 1112235788899999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001142 1119 ERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1119 ~RPSa~EVL~~L~~~~ 1134 (1142)
+|||+.|+++|+|+..
T Consensus 288 kRPTa~elL~hp~F~~ 303 (676)
T 3qa8_A 288 QRGTDPQNPNVGCFQA 303 (676)
T ss_dssp ---CCTTCCCCTTHHH
T ss_pred hCcCHHHHhcCHHHHH
Confidence 9999999999998753
No 248
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=1.7e-34 Score=340.31 Aligned_cols=270 Identities=14% Similarity=0.118 Sum_probs=188.5
Q ss_pred CCCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC-CCcccee------
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH-SCIVEMY------ 876 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H-pNIVkl~------ 876 (1142)
...|.+.++||+|+||+||+|++. +..||||+...... ......+. +.+|+.+++.++| +|...++
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~-~~~~~~~~----~~~E~~~~~~l~~~~~~~~~~~~~~~~ 151 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQ----MKEEVLRLRLLRGIKNQKQAKVHLRFI 151 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHH----HHHHHHGGGGSTTCCSHHHHHHHTCBC
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC-ccHHHHHH----HHHHHHHHHhhccCCCHHHHHHhcccc
Confidence 345889999999999999999985 78899998653321 11122233 4799999999977 4332221
Q ss_pred ---eeEecCCCC---CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhc--cCCCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001142 877 ---GHKISSKWL---PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE--TGEKHVSVKLALFIAQDVAAALVELHSK 948 (1142)
Q Consensus 877 ---g~~~~~~~~---~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~--~~~~~ls~~~i~~Ia~qIa~gL~yLHs~ 948 (1142)
+.....+.. ....+.........+++|+++ +++|.++++.... .....+++..+..|+.||+.||+|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 230 (413)
T 3dzo_A 152 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 230 (413)
T ss_dssp CCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 111111000 000000111234568888887 5899999964421 2234678889999999999999999999
Q ss_pred CccccCCCCCCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcccc------
Q 001142 949 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH------ 1022 (1142)
Q Consensus 949 gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------ 1022 (1142)
||+||||||+|||++.+ +.+||+|||+++..... .....| +.|+|||++.+..
T Consensus 231 ~iiHrDiKp~NILl~~~-------~~~kL~DFG~a~~~~~~-------------~~~~~g-~~y~aPE~~~~~~~~~~~~ 289 (413)
T 3dzo_A 231 GLVHTYLRPVDIVLDQR-------GGVFLTGFEHLVRDGAS-------------AVSPIG-RGFAPPETTAERMLPFGQH 289 (413)
T ss_dssp TEECSCCCGGGEEECTT-------CCEEECCGGGCEETTEE-------------ECCCCC-TTTCCHHHHHHHTSTTGGG
T ss_pred CcccCCcccceEEEecC-------CeEEEEeccceeecCCc-------------cccCCC-CceeCchhhhccccccccc
Confidence 99999999999999987 77999999998764432 113357 9999999984321
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhH
Q 001142 1023 KPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1102 (1142)
Q Consensus 1023 ~~~~~s~ksDVwSLGviL~ELLtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1142)
....++.++|||||||++|||++|+.||......+....+. ... ...+
T Consensus 290 ~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~-----------------------~~~---------~~~~ 337 (413)
T 3dzo_A 290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF-----------------------RSC---------KNIP 337 (413)
T ss_dssp CCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGG-----------------------SSC---------CCCC
T ss_pred cCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHH-----------------------hhc---------ccCC
Confidence 23567889999999999999999999997643221111100 000 0344
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001142 1103 SFLVDVFRRCTEENPTERPTAGDLYEMFVART 1134 (1142)
Q Consensus 1103 ~~L~dLI~~CL~~DP~~RPSa~EVL~~L~~~~ 1134 (1142)
+.+.+|+.+||+.||++|||+.++++|+|++.
T Consensus 338 ~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~ 369 (413)
T 3dzo_A 338 QPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 369 (413)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHhCHHHHH
Confidence 67999999999999999999999999999853
No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=8.6e-33 Score=309.76 Aligned_cols=230 Identities=14% Similarity=0.081 Sum_probs=176.5
Q ss_pred CCcceeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 884 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~ 884 (1142)
.+|++.+.||+|+||.||+|++. +..||+|+...... ......+.+ .+|+.++.+++||||+++++++.+.+
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~-~~~~~~~~~----~~e~~~l~~l~hp~iv~~~~~~~~~~- 104 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGV-LPDDVLQET----LSRTLRLSRIDKPGVARVLDVVHTRA- 104 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCC-SCHHHHHHH----HHHHHHHHTCCCTTBCCEEEEEEETT-
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccc-cCHHHHHHH----HHHHHHHhcCCCCCcceeeEEEEECC-
Confidence 56999999999999999999985 67788887542211 122223334 79999999999999999999998755
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeecc
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 964 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~ 964 (1142)
..|+||||++|++|.++++. .....++..|+.||+.||+|||++||+||||||+|||++.
T Consensus 105 -------------~~~lv~e~~~g~~L~~~l~~-------~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~ 164 (286)
T 3uqc_A 105 -------------GGLVVAEWIRGGSLQEVADT-------SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI 164 (286)
T ss_dssp -------------EEEEEEECCCEEEHHHHHTT-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEET
T ss_pred -------------cEEEEEEecCCCCHHHHHhc-------CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcC
Confidence 35999999999999999853 1356678899999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001142 965 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1044 (1142)
Q Consensus 965 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELL 1044 (1142)
+ +.+||+++| |++ .++.++|||||||++|||+
T Consensus 165 ~-------g~~kl~~~~------------------------------~~~-----------~~~~~~Di~slG~il~ell 196 (286)
T 3uqc_A 165 D-------GDVVLAYPA------------------------------TMP-----------DANPQDDIRGIGASLYALL 196 (286)
T ss_dssp T-------SCEEECSCC------------------------------CCT-----------TCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEecc------------------------------ccC-----------CCCchhHHHHHHHHHHHHH
Confidence 7 778887544 222 2468999999999999999
Q ss_pred hCCCCCCCCCHHHHHH---HHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001142 1045 TLQVPYMGLSELEIHD---LIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1121 (1142)
Q Consensus 1045 tG~~Pf~~~~~~el~~---~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RP 1121 (1142)
+|+.||.+.+..+... .......+. ........++.+.+++.+||+.||.+|
T Consensus 197 tg~~Pf~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~l~~li~~~l~~dP~~R- 251 (286)
T 3uqc_A 197 VNRWPLPEAGVRSGLAPAERDTAGQPIE------------------------PADIDRDIPFQISAVAARSVQGDGGIR- 251 (286)
T ss_dssp HSEECSCCCSBCCCSEECCBCTTSCBCC------------------------HHHHCTTSCHHHHHHHHHHHCTTSSCC-
T ss_pred HCCCCCCcCCcchhhHHHHHHhccCCCC------------------------hhhcccCCCHHHHHHHHHHcccCCccC-
Confidence 9999998644321100 000000000 001112566789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001142 1122 TAGDLYEMFVARTS 1135 (1142)
Q Consensus 1122 Sa~EVL~~L~~~~s 1135 (1142)
|+.|+++.+.....
T Consensus 252 s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 252 SASTLLNLMQQATA 265 (286)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999887544
No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.98 E-value=1.4e-32 Score=344.17 Aligned_cols=242 Identities=22% Similarity=0.246 Sum_probs=186.5
Q ss_pred CCcceeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001142 807 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 883 (1142)
Q Consensus 807 ~~y~l~~~LG~GsfG~Vy~a~~~---~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~ 883 (1142)
.+|++.+.||+|+||.||+|.+. +..||+|+.. .. ........ +.+|+.++++++|||||++++++...+
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~--~~-~~~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~~ 152 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLV--HS-GDAEAQAM----AMAERQFLAEVVHPSIVQIFNFVEHTD 152 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESC--SS-CCHHHHHH----HHHHHGGGGGCCCTTBCCEEEEEEEEC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeC--cc-CCHHHHHH----HHHHHHHHHhcCCCCcCeEeeeEeecC
Confidence 67999999999999999999983 5678888642 21 12232333 479999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeec
Q 001142 884 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 963 (1142)
Q Consensus 884 ~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld 963 (1142)
.. .....||||||++|++|.+++.. .+++..++.|+.||+.||.|||++||+||||||+|||++
T Consensus 153 ~~---------~~~~~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~ 216 (681)
T 2pzi_A 153 RH---------GDPVGYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216 (681)
T ss_dssp TT---------SCEEEEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred CC---------CCceeEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe
Confidence 21 12235999999999999887642 689999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001142 964 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1043 (1142)
Q Consensus 964 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~EL 1043 (1142)
.+ .+||+|||+++..... ....||+.|+|||++.+ .++.++|||||||++|+|
T Consensus 217 ~~--------~~kl~DFG~a~~~~~~--------------~~~~gt~~y~aPE~~~~-----~~~~~sDi~slG~~l~~l 269 (681)
T 2pzi_A 217 EE--------QLKLIDLGAVSRINSF--------------GYLYGTPGFQAPEIVRT-----GPTVATDIYTVGRTLAAL 269 (681)
T ss_dssp SS--------CEEECCCTTCEETTCC--------------SCCCCCTTTSCTTHHHH-----CSCHHHHHHHHHHHHHHH
T ss_pred CC--------cEEEEecccchhcccC--------------CccCCCccccCHHHHcC-----CCCCceehhhhHHHHHHH
Confidence 63 6999999999764321 23469999999999875 247899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcccccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001142 1044 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1123 (1142)
Q Consensus 1044 LtG~~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~CL~~DP~~RPSa 1123 (1142)
++|..||.+.... ..+. .......++.+.+||.+||+.||.+||++
T Consensus 270 ~~g~~~~~~~~~~---------~~~~-------------------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~ 315 (681)
T 2pzi_A 270 TLDLPTRNGRYVD---------GLPE-------------------------DDPVLKTYDSYGRLLRRAIDPDPRQRFTT 315 (681)
T ss_dssp HSCCCEETTEECS---------SCCT-------------------------TCHHHHHCHHHHHHHHHHTCSSGGGSCSS
T ss_pred HhCCCCCcccccc---------cccc-------------------------cccccccCHHHHHHHhhhccCChhhCCCH
Confidence 9999888642100 0000 00111344678999999999999999987
Q ss_pred HHHHHHHHh
Q 001142 1124 GDLYEMFVA 1132 (1142)
Q Consensus 1124 ~EVL~~L~~ 1132 (1142)
.+.+.+.|.
T Consensus 316 ~~~l~~~l~ 324 (681)
T 2pzi_A 316 AEEMSAQLT 324 (681)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777766654
No 251
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.98 E-value=8.3e-32 Score=341.46 Aligned_cols=296 Identities=21% Similarity=0.203 Sum_probs=221.3
Q ss_pred CcccccCCCCCCcccCCCCCCC--CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcCCc
Q 001142 18 IKEKLPSEANKINNEKNGSVND--DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLR 94 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~--l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~L~ 94 (1142)
.++.|.+..|++++..+..+.. +++|++|+|++|++++.+|..++.+ ++|++|+|++|.++ .+|..|..+++|+
T Consensus 369 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 445 (768)
T 3rgz_A 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC---SELVSLHLSFNYLSGTIPSSLGSLSKLR 445 (768)
T ss_dssp TCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGC---TTCCEEECCSSEEESCCCGGGGGCTTCC
T ss_pred CCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcC---CCCCEEECcCCcccCcccHHHhcCCCCC
Confidence 4555555555555444444444 5667777777777766666666544 77777777777776 5577777777777
Q ss_pred EEEccCCCCC-cCchhhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEcc
Q 001142 95 NLKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC 172 (1142)
Q Consensus 95 ~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls 172 (1142)
+|+|++|.++ .+|..+.++++|+.|+|++|.+. .+|..+..+++|++|+|++|. +.+.+|.+++.+++|+.|+|+
T Consensus 446 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~---l~~~~p~~~~~l~~L~~L~L~ 522 (768)
T 3rgz_A 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNR---LTGEIPKWIGRLENLAILKLS 522 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC---CCSCCCGGGGGCTTCCEEECC
T ss_pred EEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCc---cCCcCChHHhcCCCCCEEECC
Confidence 7777777776 66777777777777777777754 566777777777777777743 344567777777778888888
Q ss_pred CCCCC-ccCcccCCCCCCCEEEccCCCCC-ccchhh--------------------------------------------
Q 001142 173 HFSIR-YLPPEIGCLSNLEQLDLSFNKMK-YLPTEI-------------------------------------------- 206 (1142)
Q Consensus 173 ~N~L~-~IP~~l~~L~~L~~L~Ls~N~L~-~lP~~l-------------------------------------------- 206 (1142)
+|+++ .+|..++.+++|++|+|++|+++ .+|..+
T Consensus 523 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (768)
T 3rgz_A 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSE 602 (768)
T ss_dssp SSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGG
T ss_pred CCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccch
Confidence 88777 66777777788888888877776 555443
Q ss_pred --------------------------cCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCC
Q 001142 207 --------------------------CYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNL 259 (1142)
Q Consensus 207 --------------------------~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L 259 (1142)
+.+++|+.|+|++|+|+ .||.+++++++|+.|+|++|+|+|.+|..|+++++|
T Consensus 603 ~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L 682 (768)
T 3rgz_A 603 QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL 682 (768)
T ss_dssp GGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred hhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCC
Confidence 33567888888888888 788888888888888888888888888888888888
Q ss_pred CEEEccCCCCCCCCCCCchhhccCCCCCCCCCCCCcccccccccccCCCCCCCCCCccCCCCCCC-CC
Q 001142 260 QNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPMLENDGNVSFSAESDA-GS 326 (1142)
Q Consensus 260 ~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~sF~~n~~l-g~ 326 (1142)
+.|||++|+|++ .+|..+........+...+|.+.+..|. ..++.+|...+|.||+++ |.
T Consensus 683 ~~LdLs~N~l~g--~ip~~l~~l~~L~~L~ls~N~l~g~iP~-----~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 683 NILDLSSNKLDG--RIPQAMSALTMLTEIDLSNNNLSGPIPE-----MGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CEEECCSSCCEE--CCCGGGGGCCCCSEEECCSSEEEEECCS-----SSSGGGSCGGGGCSCTEEEST
T ss_pred CEEECCCCcccC--cCChHHhCCCCCCEEECcCCcccccCCC-----chhhccCCHHHhcCCchhcCC
Confidence 888888888887 6888888777777788888888877774 467888999999999987 64
No 252
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=1.2e-30 Score=330.99 Aligned_cols=274 Identities=20% Similarity=0.232 Sum_probs=243.2
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcCCc
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLR 94 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~L~ 94 (1142)
.+.++.|.+..|++++..+..|.++++|++|||++|++++.+|..++.+ ++|+.|+|++|.++ .+|..+..+++|+
T Consensus 393 ~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~L~~n~l~~~~p~~~~~l~~L~ 469 (768)
T 3rgz_A 393 KNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL---SKLRDLKLWLNMLEGEIPQELMYVKTLE 469 (768)
T ss_dssp TCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC---TTCCEEECCSSCCCSCCCGGGGGCTTCC
T ss_pred cCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcC---CCCCEEECCCCcccCcCCHHHcCCCCce
Confidence 3479999999999999999999999999999999999999999888766 99999999999999 7799999999999
Q ss_pred EEEccCCCCC-cCchhhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEcc
Q 001142 95 NLKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC 172 (1142)
Q Consensus 95 ~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls 172 (1142)
+|+|++|+++ .+|..+.++++|+.|+|++|.+. .+|..+..+++|++|+|++| .+.+.+|..+.++++|+.|+++
T Consensus 470 ~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N---~l~~~~p~~l~~l~~L~~L~Ls 546 (768)
T 3rgz_A 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN---SFSGNIPAELGDCRSLIWLDLN 546 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS---CCEEECCGGGGGCTTCCEEECC
T ss_pred EEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCC---cccCcCCHHHcCCCCCCEEECC
Confidence 9999999998 78999999999999999999966 78889999999999999994 5567889999999999999999
Q ss_pred CCCCC-ccCccc--------------------------------------------------------------------
Q 001142 173 HFSIR-YLPPEI-------------------------------------------------------------------- 183 (1142)
Q Consensus 173 ~N~L~-~IP~~l-------------------------------------------------------------------- 183 (1142)
+|.++ .+|..+
T Consensus 547 ~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~ 626 (768)
T 3rgz_A 547 TNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSP 626 (768)
T ss_dssp SSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCC
T ss_pred CCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCch
Confidence 99987 666543
Q ss_pred --CCCCCCCEEEccCCCCC-ccchhhcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCC
Q 001142 184 --GCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNL 259 (1142)
Q Consensus 184 --~~L~~L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L 259 (1142)
+.+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|+ .||..++++++|+.|||++|+|+|.+|..+..+++|
T Consensus 627 ~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L 706 (768)
T 3rgz_A 627 TFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTML 706 (768)
T ss_dssp SCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCC
T ss_pred hhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCC
Confidence 34578999999999999 89999999999999999999999 999999999999999999999999999999999999
Q ss_pred CEEEccCCCCCCCCCCCchhhccCCCCCCCCCCCCccc
Q 001142 260 QNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFIS 297 (1142)
Q Consensus 260 ~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~~~~ 297 (1142)
+.|+|++|+|+| .||....+..-.......++++|+
T Consensus 707 ~~L~ls~N~l~g--~iP~~~~~~~~~~~~~~gN~~Lcg 742 (768)
T 3rgz_A 707 TEIDLSNNNLSG--PIPEMGQFETFPPAKFLNNPGLCG 742 (768)
T ss_dssp SEEECCSSEEEE--ECCSSSSGGGSCGGGGCSCTEEES
T ss_pred CEEECcCCcccc--cCCCchhhccCCHHHhcCCchhcC
Confidence 999999999999 788654433222222334445554
No 253
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=1.3e-29 Score=285.19 Aligned_cols=271 Identities=20% Similarity=0.203 Sum_probs=231.9
Q ss_pred ccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc---CccccCCcCCcEE
Q 001142 20 EKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI---PKSVGRYEKLRNL 96 (1142)
Q Consensus 20 ~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i---P~~l~~L~~L~~L 96 (1142)
..+....++|+.++...+ ++|++|+|++|+|+...+..|+ ++++|++|+|++|.|+.+ |..+..+++|++|
T Consensus 10 ~~l~c~~~~l~~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~---~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L 83 (306)
T 2z66_A 10 TEIRCNSKGLTSVPTGIP---SSATRLELESNKLQSLPHGVFD---KLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYL 83 (306)
T ss_dssp TEEECCSSCCSSCCSCCC---TTCCEEECCSSCCCCCCTTTTT---TCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEE
T ss_pred CEEEcCCCCcccCCCCCC---CCCCEEECCCCccCccCHhHhh---ccccCCEEECCCCccCcccCcccccccccccCEE
Confidence 357788888999887543 6899999999999977665555 459999999999999866 6778889999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc--cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCC
Q 001142 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF--ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~--~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1142)
+|++|.|+.+|..+.++++|+.|+|++|.+...+. .+..+++|++|++++|. .....+..+..+++|+.|++++|
T Consensus 84 ~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~---l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 84 DLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTH---TRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp ECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSC---CEECSTTTTTTCTTCCEEECTTC
T ss_pred ECCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCc---CCccchhhcccCcCCCEEECCCC
Confidence 99999999999999999999999999999777664 78999999999999954 44556777899999999999999
Q ss_pred CCCc--cCcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeCcCCcCCCCCc
Q 001142 175 SIRY--LPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 175 ~L~~--IP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
.++. +|..+..+++|++|+|++|+|+.+ |..+..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++|+|++.+|
T Consensus 161 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 161 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK 240 (306)
T ss_dssp EEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSS
T ss_pred ccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCH
Confidence 9985 789999999999999999999977 7889999999999999999998765 67889999999999999999999
Q ss_pred ccccCCC-CCCEEEccCCCCCCCCCCCchhhccCCCCCCCCCCCCccccc
Q 001142 251 LDLCLMH-NLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSS 299 (1142)
Q Consensus 251 ~~l~~L~-~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~~~~~~ 299 (1142)
..+..++ +|+.|+|++|+|+|.|+++.+..|......+....+.+.|..
T Consensus 241 ~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~ 290 (306)
T 2z66_A 241 QELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECAT 290 (306)
T ss_dssp SSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEE
T ss_pred HHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCC
Confidence 9999985 999999999999998888776666555544444444444443
No 254
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.96 E-value=1.9e-28 Score=279.00 Aligned_cols=245 Identities=22% Similarity=0.313 Sum_probs=182.3
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1142)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.+|..+. ++|++|
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~Ls~n~l~~l~~~~~--~~L~~L 126 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPL---VKLERLYLSKNQLKELPEKMP--KTLQEL 126 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTC---TTCCEEECCSSCCSBCCSSCC--TTCCEE
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCC---CCCCEEECCCCcCCccChhhc--ccccEE
Confidence 467778888888888877778888888888888888887777665444 788888888888888777655 578888
Q ss_pred EccCCCCCcCch-hhcCCCCCCEEEccCCCCC---CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEcc
Q 001142 97 KFFGNEINLFPS-EVGNLLGLECLQIKISSPG---VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC 172 (1142)
Q Consensus 97 ~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~l~---~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls 172 (1142)
+|++|.|+.++. .|.++++|+.|+|++|.+. ..+..+..+++|++|++++|.+.. +|..+. ++|+.|+++
T Consensus 127 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~----l~~~~~--~~L~~L~l~ 200 (330)
T 1xku_A 127 RVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT----IPQGLP--PSLTELHLD 200 (330)
T ss_dssp ECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS----CCSSCC--TTCSEEECT
T ss_pred ECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc----CCcccc--ccCCEEECC
Confidence 888888876654 3677888888888887765 445567778888888888765543 343332 677888888
Q ss_pred CCCCCcc-CcccCCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCc
Q 001142 173 HFSIRYL-PPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 173 ~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
+|+++.+ |..|..+++|+.|+|++|+|+.++ ..+..+++|+.|+|++|+|+.+|.++..+++|+.|+|++|+|+++++
T Consensus 201 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~~~ 280 (330)
T 1xku_A 201 GNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGS 280 (330)
T ss_dssp TSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCCCT
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcCCccCh
Confidence 8888755 556777888888888888888664 46777888888888888888888778778888888888888888777
Q ss_pred ccccCC------CCCCEEEccCCCCCCC
Q 001142 251 LDLCLM------HNLQNLNLQYNKLLSY 272 (1142)
Q Consensus 251 ~~l~~L------~~L~~L~Ls~N~L~~~ 272 (1142)
..|+.. ..|+.|+|++|++..+
T Consensus 281 ~~f~~~~~~~~~~~l~~l~l~~N~~~~~ 308 (330)
T 1xku_A 281 NDFCPPGYNTKKASYSGVSLFSNPVQYW 308 (330)
T ss_dssp TSSSCSSCCTTSCCCSEEECCSSSSCGG
T ss_pred hhcCCcccccccccccceEeecCccccc
Confidence 666543 6777888888887653
No 255
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=6.1e-30 Score=290.17 Aligned_cols=229 Identities=21% Similarity=0.251 Sum_probs=163.1
Q ss_pred CCCCEEEccCCCCCC--CCcccccCCCCCCCccEEEeec-CCCC-ccCccccCCcCCcEEEccCCCCC-cCchhhcCCCC
Q 001142 41 DDDSVIDVSGKTVDF--PLIESYGNRGGDNSVEGLYLYK-NVLN-LIPKSVGRYEKLRNLKFFGNEIN-LFPSEVGNLLG 115 (1142)
Q Consensus 41 ~~L~~LdLs~N~L~~--~~p~~~~~l~~L~~L~~L~Ls~-N~Lt-~iP~~l~~L~~L~~L~Ls~N~L~-~lP~~l~~L~~ 115 (1142)
..++.|+|++|+|++ .+|..++.+ ++|++|+|++ |.++ .+|..|.++++|++|+|++|.|+ .+|..|.++++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l---~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~ 126 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANL---PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGC---TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTT
T ss_pred ceEEEEECCCCCccCCcccChhHhCC---CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCC
Confidence 467777777777777 666655544 7777777773 6666 56777777777777777777776 66777777777
Q ss_pred CCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCC-CCcEEEccCCCCC-ccCcccCCCCCCCEE
Q 001142 116 LECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLK-CLTKLSVCHFSIR-YLPPEIGCLSNLEQL 192 (1142)
Q Consensus 116 L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~-~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L 192 (1142)
|++|+|++|.+. .+|..+..+++|++|+|++| .+.+.+|..+..++ +|+.|++++|+++ .+|..+..++ |+.|
T Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N---~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGN---RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp CCEEECCSSEEESCCCGGGGGCTTCCEEECCSS---CCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEE
T ss_pred CCEEeCCCCccCCcCChHHhcCCCCCeEECcCC---cccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEE
Confidence 777777777755 56667777777777777773 33446666777776 7777777777777 5677776666 7777
Q ss_pred EccCCCCC-ccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 193 DLSFNKMK-YLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 193 ~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|++|+|+ .+|..+..+++|+.|+|++|.++..++.+..+++|+.|+|++|+|++.+|..|..+++|+.|+|++|++++
T Consensus 203 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred ECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 77777777 45666777777777777777777554456667777777777777777777777777777777777777775
Q ss_pred CCCCCch
Q 001142 272 YCQVPSW 278 (1142)
Q Consensus 272 ~~~iP~~ 278 (1142)
.+|..
T Consensus 283 --~ip~~ 287 (313)
T 1ogq_A 283 --EIPQG 287 (313)
T ss_dssp --ECCCS
T ss_pred --cCCCC
Confidence 35554
No 256
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.96 E-value=2.1e-28 Score=289.99 Aligned_cols=253 Identities=20% Similarity=0.190 Sum_probs=164.4
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCc-ccccCCCCCCCccEEEeecCCCCcc-CccccCCcCC
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLI-ESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKL 93 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p-~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L 93 (1142)
++.++.|.+..|+|+.+.+..|.++++|++|+|++|.+.+.++ ..| .++++|++|+|++|.++.+ |..|.++++|
T Consensus 29 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~---~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 105 (455)
T 3v47_A 29 PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTF---RGLSSLIILKLDYNQFLQLETGAFNGLANL 105 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTT---TTCTTCCEEECTTCTTCEECTTTTTTCTTC
T ss_pred CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccc---cccccCCEEeCCCCccCccChhhccCcccC
Confidence 3568888888888888888888888888888888888875553 334 4458888888888888866 6678888888
Q ss_pred cEEEccCCCCCc-Cchh--hcCCCCCCEEEccCCCCCCC-ccc-ccCCCCCCEEECCCCCCCCCccc-------------
Q 001142 94 RNLKFFGNEINL-FPSE--VGNLLGLECLQIKISSPGVN-GFA-LNKLKGLKELELSKVPPRPSVLT------------- 155 (1142)
Q Consensus 94 ~~L~Ls~N~L~~-lP~~--l~~L~~L~~L~Ls~N~l~~~-~~~-~~~L~~L~~L~Ls~n~~n~~~~~------------- 155 (1142)
++|+|++|+|+. +|.. |.++++|++|+|++|.+... |.. +..+++|++|++++|.+......
T Consensus 106 ~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L 185 (455)
T 3v47_A 106 EVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLL 185 (455)
T ss_dssp CEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEE
T ss_pred CEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccc
Confidence 888888888874 4444 77788888888888886655 433 67778888888877654332111
Q ss_pred ------------------------------------------chhhhc--------------------------------
Q 001142 156 ------------------------------------------LLSEIA-------------------------------- 161 (1142)
Q Consensus 156 ------------------------------------------lp~~l~-------------------------------- 161 (1142)
.|..+.
T Consensus 186 ~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~ 265 (455)
T 3v47_A 186 RLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPD 265 (455)
T ss_dssp ECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCC
T ss_pred ccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCc
Confidence 000000
Q ss_pred -------CCCCCcEEEccCCCCCc-cCcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-CccccC
Q 001142 162 -------GLKCLTKLSVCHFSIRY-LPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYL 231 (1142)
Q Consensus 162 -------~L~~L~~L~Ls~N~L~~-IP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~ 231 (1142)
..++|+.|++++|.++. +|..+..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |..+..
T Consensus 266 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 345 (455)
T 3v47_A 266 NFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFEN 345 (455)
T ss_dssp TTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTT
T ss_pred ccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcC
Confidence 01234444444444442 244556666666666666666644 44566666666666666666644 444555
Q ss_pred CCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 232 LQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 232 L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+++|+.|+|++|+|++++|..|..+++|+.|+|++|++++
T Consensus 346 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 385 (455)
T 3v47_A 346 LDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS 385 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cccCCEEECCCCcccccChhhccccccccEEECCCCcccc
Confidence 6666666666666666666566666666666666666655
No 257
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=3.8e-28 Score=287.96 Aligned_cols=255 Identities=20% Similarity=0.281 Sum_probs=224.1
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEE
Q 001142 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLK 97 (1142)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~ 97 (1142)
...+....++|+.++.... +++++|+|++|+|++..+..|..+ ++|++|+|++|.|+.++ ..|.++++|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l---~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~ 118 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGIS---TNTRLLNLHENQIQIIKVNSFKHL---RHLEILQLSRNHIRTIEIGAFNGLANLNTLE 118 (440)
T ss_dssp SCEEECCSCCCSSCCSCCC---TTCSEEECCSCCCCEECTTTTSSC---SSCCEEECCSSCCCEECGGGGTTCSSCCEEE
T ss_pred CCEEEeCCCCcCcCCCCCC---CCCcEEEccCCcCCeeCHHHhhCC---CCCCEEECCCCcCCccChhhccCCccCCEEE
Confidence 4567778888998886544 689999999999999888777555 99999999999999886 5799999999999
Q ss_pred ccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccch-hhhcCCCCCcEEEccCC
Q 001142 98 FFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLL-SEIAGLKCLTKLSVCHF 174 (1142)
Q Consensus 98 Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~n~~n~~~~~lp-~~l~~L~~L~~L~Ls~N 174 (1142)
|++|+|+.+|. .|.++++|+.|+|++|.+..++. .|..+++|++|+|++| +....++ ..|.++++|+.|+|++|
T Consensus 119 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~---~~l~~i~~~~~~~l~~L~~L~L~~n 195 (440)
T 3zyj_A 119 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL---KRLSYISEGAFEGLSNLRYLNLAMC 195 (440)
T ss_dssp CCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC---TTCCEECTTTTTTCSSCCEEECTTS
T ss_pred CCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCC---CCcceeCcchhhcccccCeecCCCC
Confidence 99999999876 58899999999999999877664 7899999999999984 3344444 46889999999999999
Q ss_pred CCCccCcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeCcCCcCCCCCccc
Q 001142 175 SIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLD 252 (1142)
Q Consensus 175 ~L~~IP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~L~Ls~N~Ls~~~p~~ 252 (1142)
+|+.+|. +..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |..+.++++|+.|+|++|+|+++++..
T Consensus 196 ~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 274 (440)
T 3zyj_A 196 NLREIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDL 274 (440)
T ss_dssp CCSSCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTT
T ss_pred cCccccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhH
Confidence 9999985 78999999999999999977 78899999999999999999966 567788999999999999999999989
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCCchhhccC
Q 001142 253 LCLMHNLQNLNLQYNKLLSYCQVPSWICCNL 283 (1142)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l 283 (1142)
|..+++|+.|+|++|+|.|.|.+-+...|..
T Consensus 275 ~~~l~~L~~L~L~~Np~~CdC~l~~l~~~~~ 305 (440)
T 3zyj_A 275 FTPLHHLERIHLHHNPWNCNCDILWLSWWIK 305 (440)
T ss_dssp TSSCTTCCEEECCSSCEECSSTTHHHHHHHH
T ss_pred hccccCCCEEEcCCCCccCCCCchHHHHHHH
Confidence 9999999999999999999999765555543
No 258
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=2.6e-28 Score=299.52 Aligned_cols=131 Identities=16% Similarity=0.100 Sum_probs=114.0
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCc
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLR 94 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~ 94 (1142)
+++++.|++..|+|+.+.+.+|.++++|++|||++|+|+++.+..|+.+ ++|++|+|++|+|+.+|. .|.+|++|+
T Consensus 51 p~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L---~~L~~L~Ls~N~l~~l~~~~f~~L~~L~ 127 (635)
T 4g8a_A 51 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSL---SHLSTLILTGNPIQSLALGAFSGLSSLQ 127 (635)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC---TTCCEEECTTCCCCEECGGGGTTCTTCC
T ss_pred CcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCC---CCCCEEEccCCcCCCCCHHHhcCCCCCC
Confidence 3568999999999999999999999999999999999999888766544 999999999999999975 589999999
Q ss_pred EEEccCCCCCcCchh-hcCCCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCCC
Q 001142 95 NLKFFGNEINLFPSE-VGNLLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVPP 149 (1142)
Q Consensus 95 ~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~l~~--~~~~~~~L~~L~~L~Ls~n~~ 149 (1142)
+|+|++|+|+.+|.. |+++++|++|+|++|.+.. .|..+..+++|++|+|++|.+
T Consensus 128 ~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 128 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp EEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred EEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 999999999988764 8899999999999998764 456788888999888887653
No 259
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=2.5e-28 Score=278.35 Aligned_cols=241 Identities=21% Similarity=0.317 Sum_probs=133.9
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1142)
.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.+|..+. ++|++|+
T Consensus 55 ~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~--~~L~~L~ 129 (332)
T 2ft3_A 55 DTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPL---RKLQKLYISKNHLVEIPPNLP--SSLVELR 129 (332)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTC---TTCCEEECCSSCCCSCCSSCC--TTCCEEE
T ss_pred CCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCc---CCCCEEECCCCcCCccCcccc--ccCCEEE
Confidence 45555555566665555556666666666666666655555444333 556666666666665555443 4566666
Q ss_pred ccCCCCCcCchh-hcCCCCCCEEEccCCCCC---CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC
Q 001142 98 FFGNEINLFPSE-VGNLLGLECLQIKISSPG---VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1142)
Q Consensus 98 Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~l~---~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1142)
|++|+|+.+|.. |.++++|+.|+|++|.+. ..+..+..+ +|++|++++|.+.. +|..+. ++|+.|++++
T Consensus 130 l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~----l~~~~~--~~L~~L~l~~ 202 (332)
T 2ft3_A 130 IHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG----IPKDLP--ETLNELHLDH 202 (332)
T ss_dssp CCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS----CCSSSC--SSCSCCBCCS
T ss_pred CCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc----cCcccc--CCCCEEECCC
Confidence 666666555443 555566666666655543 333444444 55556665544332 333222 4555566666
Q ss_pred CCCCccC-cccCCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcc
Q 001142 174 FSIRYLP-PEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSL 251 (1142)
Q Consensus 174 N~L~~IP-~~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~ 251 (1142)
|.++.++ ..+..+++|+.|+|++|+|+.++ ..+..+++|+.|+|++|+|+.||.++..+++|+.|+|++|+|+++++.
T Consensus 203 n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~~~~~~ 282 (332)
T 2ft3_A 203 NKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGVN 282 (332)
T ss_dssp SCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCCBCCTT
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCCccChh
Confidence 6665443 34555666666666666666443 345556666666666666666666565666666666666666665555
Q ss_pred cccCC------CCCCEEEccCCCCC
Q 001142 252 DLCLM------HNLQNLNLQYNKLL 270 (1142)
Q Consensus 252 ~l~~L------~~L~~L~Ls~N~L~ 270 (1142)
.|..+ ..|+.|++++|++.
T Consensus 283 ~~~~~~~~~~~~~l~~L~l~~N~~~ 307 (332)
T 2ft3_A 283 DFCPVGFGVKRAYYNGISLFNNPVP 307 (332)
T ss_dssp SSSCSSCCSSSCCBSEEECCSSSSC
T ss_pred HccccccccccccccceEeecCccc
Confidence 54432 34556666666655
No 260
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=8.4e-28 Score=285.97 Aligned_cols=254 Identities=20% Similarity=0.253 Sum_probs=222.7
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEE
Q 001142 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLK 97 (1142)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~ 97 (1142)
...+....++++.++.... ++|++|+|++|+|++..+..|+.+ ++|+.|+|++|.|+.++ ..|.++++|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 129 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP---SNTRYLNLMENNIQMIQADTFRHL---HHLEVLQLGRNSIRQIEVGAFNGLASLNTLE 129 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC---TTCSEEECCSSCCCEECTTTTTTC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcEEEECCCCcCccCCCCC---CCccEEECcCCcCceECHHHcCCC---CCCCEEECCCCccCCcChhhccCcccCCEEE
Confidence 4567777888888875443 689999999999999888877555 99999999999999885 6799999999999
Q ss_pred ccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchh-hhcCCCCCcEEEccCC
Q 001142 98 FFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLS-EIAGLKCLTKLSVCHF 174 (1142)
Q Consensus 98 Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~n~~n~~~~~lp~-~l~~L~~L~~L~Ls~N 174 (1142)
|++|+|+.+|.. |.++++|+.|+|++|.+..++. .|..+++|++|++++| +....++. .|.++++|+.|+|++|
T Consensus 130 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~---~~l~~i~~~~~~~l~~L~~L~L~~n 206 (452)
T 3zyi_A 130 LFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL---KKLEYISEGAFEGLFNLKYLNLGMC 206 (452)
T ss_dssp CCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC---TTCCEECTTTTTTCTTCCEEECTTS
T ss_pred CCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCC---CCccccChhhccCCCCCCEEECCCC
Confidence 999999988766 7889999999999999887664 7899999999999983 33444443 5889999999999999
Q ss_pred CCCccCcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeCcCCcCCCCCccc
Q 001142 175 SIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLD 252 (1142)
Q Consensus 175 ~L~~IP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~L~Ls~N~Ls~~~p~~ 252 (1142)
+|+.+|. +..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+++++..
T Consensus 207 ~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 285 (452)
T 3zyi_A 207 NIKDMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDL 285 (452)
T ss_dssp CCSSCCC-CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTS
T ss_pred ccccccc-ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHH
Confidence 9999874 78999999999999999976 78899999999999999999966 667888999999999999999999988
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCCchhhcc
Q 001142 253 LCLMHNLQNLNLQYNKLLSYCQVPSWICCN 282 (1142)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~ 282 (1142)
|..+++|+.|+|++|+|.|.|++-....|.
T Consensus 286 ~~~l~~L~~L~L~~Np~~CdC~~~~l~~~l 315 (452)
T 3zyi_A 286 FTPLRYLVELHLHHNPWNCDCDILWLAWWL 315 (452)
T ss_dssp STTCTTCCEEECCSSCEECSTTTHHHHHHH
T ss_pred hccccCCCEEEccCCCcCCCCCchHHHHHH
Confidence 999999999999999999999876554443
No 261
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=1.1e-28 Score=279.99 Aligned_cols=247 Identities=17% Similarity=0.183 Sum_probs=225.3
Q ss_pred CCcccccCCCCCCcc--cCCCCCCCCCCCCEEEccC-CCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcC
Q 001142 17 PIKEKLPSEANKINN--EKNGSVNDDDDDSVIDVSG-KTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEK 92 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~--l~~~~f~~l~~L~~LdLs~-N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~ 92 (1142)
..+..|.+..|+|++ ..+..|.++++|++|+|++ |++++.+|..|+.+ ++|++|+|++|.|+ .+|..|.++++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l---~~L~~L~Ls~n~l~~~~p~~~~~l~~ 126 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKL---TQLHYLYITHTNVSGAIPDFLSQIKT 126 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGC---TTCSEEEEEEECCEEECCGGGGGCTT
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcC---CCCCEEECcCCeeCCcCCHHHhCCCC
Confidence 368889999999998 6678999999999999995 99999999888665 99999999999999 78999999999
Q ss_pred CcEEEccCCCCC-cCchhhcCCCCCCEEEccCCCCC-CCcccccCCC-CCCEEECCCCCCCCCcccchhhhcCCCCCcEE
Q 001142 93 LRNLKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLK-GLKELELSKVPPRPSVLTLLSEIAGLKCLTKL 169 (1142)
Q Consensus 93 L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~l~-~~~~~~~~L~-~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L 169 (1142)
|++|+|++|.|+ .+|..|.++++|++|+|++|.+. .+|..+..++ +|++|++++| .+.+.+|..+..++ |+.|
T Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N---~l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN---RLTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSS---EEEEECCGGGGGCC-CSEE
T ss_pred CCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCC---eeeccCChHHhCCc-ccEE
Confidence 999999999998 78999999999999999999987 7888999998 9999999994 45567888898887 9999
Q ss_pred EccCCCCC-ccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeCcCCcCCC
Q 001142 170 SVCHFSIR-YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTS 247 (1142)
Q Consensus 170 ~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~L~Ls~N~Ls~ 247 (1142)
++++|.++ .+|..|..+++|+.|+|++|+|+..+..+..+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|+|++
T Consensus 203 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred ECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 99999999 5677889999999999999999966666889999999999999999 889999999999999999999999
Q ss_pred CCcccccCCCCCCEEEccCCCCCC
Q 001142 248 LGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 248 ~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
.+|.. ..+++|+.|++++|+.-|
T Consensus 283 ~ip~~-~~l~~L~~l~l~~N~~lc 305 (313)
T 1ogq_A 283 EIPQG-GNLQRFDVSAYANNKCLC 305 (313)
T ss_dssp ECCCS-TTGGGSCGGGTCSSSEEE
T ss_pred cCCCC-ccccccChHHhcCCCCcc
Confidence 99854 899999999999999544
No 262
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=4.2e-28 Score=289.89 Aligned_cols=256 Identities=21% Similarity=0.253 Sum_probs=165.4
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~ 95 (1142)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++.++..|+. +++|++|+|++|.++.+ |..|..+++|++
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 132 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTG---LSNLTKLDISENKIVILLDYMFQDLYNLKS 132 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTT---CTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccC---CCCCCEEECCCCccccCChhHccccccCCE
Confidence 47788888888888888888888888888888888888766655543 47788888888887765 456777777888
Q ss_pred EEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCC---------------------C
Q 001142 96 LKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRP---------------------S 152 (1142)
Q Consensus 96 L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~n~~n~---------------------~ 152 (1142)
|+|++|.|+.+ |..|.++++|+.|+|++|.+..++. .+..+++|+.|+|++|.+.. .
T Consensus 133 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~ 212 (477)
T 2id5_A 133 LEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPY 212 (477)
T ss_dssp EEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTT
T ss_pred EECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCCcc
Confidence 88887777755 4457777777777777777665553 46667777777777654432 1
Q ss_pred cccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCcc-Cccc
Q 001142 153 VLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVEL-PSGL 229 (1142)
Q Consensus 153 ~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~I-P~~l 229 (1142)
...+|..+....+|+.|+|++|+|+.+|. .+..+++|+.|+|++|.|+.++ ..|..+++|+.|+|++|+|+.+ |..+
T Consensus 213 ~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 292 (477)
T 2id5_A 213 LDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAF 292 (477)
T ss_dssp CCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTB
T ss_pred ccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHh
Confidence 22223333333355555555555555553 4556666666666666666543 3455566666666666666643 4555
Q ss_pred cCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCC
Q 001142 230 YLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQV 275 (1142)
Q Consensus 230 ~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~i 275 (1142)
..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|.+
T Consensus 293 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~ 338 (477)
T 2id5_A 293 RGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL 338 (477)
T ss_dssp TTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG
T ss_pred cCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch
Confidence 5566666666666666666665566666666666666666665543
No 263
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=9.2e-28 Score=286.92 Aligned_cols=272 Identities=20% Similarity=0.192 Sum_probs=219.6
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCc
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLR 94 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~ 94 (1142)
++.+..|.+..|+|+.+.+..|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.+|. .|.++++|+
T Consensus 31 ~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 107 (477)
T 2id5_A 31 PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNL---FNLRTLGLRSNRLKLIPLGVFTGLSNLT 107 (477)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC---TTCCEEECCSSCCCSCCTTSSTTCTTCC
T ss_pred CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCC---ccCCEEECCCCcCCccCcccccCCCCCC
Confidence 3568999999999999999999999999999999999999888777554 999999999999999986 578999999
Q ss_pred EEEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEcc
Q 001142 95 NLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC 172 (1142)
Q Consensus 95 ~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~l~~~-~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls 172 (1142)
+|+|++|+|+.+ |..|.++++|+.|+|++|.+..+ +..|..+++|+.|+|++|.+.. ..+..|.++++|+.|+|+
T Consensus 108 ~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---~~~~~l~~l~~L~~L~l~ 184 (477)
T 2id5_A 108 KLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTS---IPTEALSHLHGLIVLRLR 184 (477)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSS---CCHHHHTTCTTCCEEEEE
T ss_pred EEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcc---cChhHhcccCCCcEEeCC
Confidence 999999999965 66789999999999999997654 4689999999999999965543 334568899999999999
Q ss_pred CCCCCccCc-ccCCCCCCCEEEccCCCCC-ccchhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeCcCCcCCCCC
Q 001142 173 HFSIRYLPP-EIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLG 249 (1142)
Q Consensus 173 ~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~~ 249 (1142)
+|.++.++. .|..+++|+.|+|++|.+. .+|..+....+|+.|+|++|+|+.+|. .+..+++|+.|+|++|+|++++
T Consensus 185 ~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 264 (477)
T 2id5_A 185 HLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIE 264 (477)
T ss_dssp SCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEEC
T ss_pred CCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccC
Confidence 999997754 6788888888888887654 677666666678888888888887773 5667788888888888888877
Q ss_pred cccccCCCCCCEEEccCCCCCCC-----CCCCchhhccCCCCCCCCCCC
Q 001142 250 SLDLCLMHNLQNLNLQYNKLLSY-----CQVPSWICCNLEGNGKDSSND 293 (1142)
Q Consensus 250 p~~l~~L~~L~~L~Ls~N~L~~~-----~~iP~~~~~~l~~n~l~~~~~ 293 (1142)
+..|..+++|+.|+|++|++++. ..+|....++++.|.+...+.
T Consensus 265 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 313 (477)
T 2id5_A 265 GSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEE 313 (477)
T ss_dssp TTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCG
T ss_pred hhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCH
Confidence 77777888888888888877662 123333334555555544433
No 264
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=5.9e-28 Score=275.85 Aligned_cols=224 Identities=19% Similarity=0.174 Sum_probs=194.7
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEE
Q 001142 40 DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECL 119 (1142)
Q Consensus 40 l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L 119 (1142)
...++.|||++|+|+. +|..++. +++|++|+|++|.|+.+|..|+++++|++|+|++|.|+.+|..++++++|++|
T Consensus 80 ~~~l~~L~L~~n~l~~-lp~~l~~---l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 80 QPGRVALELRSVPLPQ-FPDQAFR---LSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPASIASLNRLREL 155 (328)
T ss_dssp STTCCEEEEESSCCSS-CCSCGGG---GTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEE
T ss_pred ccceeEEEccCCCchh-cChhhhh---CCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEE
Confidence 4789999999999984 5555554 48999999999999999999999999999999999999999999999999999
Q ss_pred EccCCC-CCCCcccccC---------CCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCC
Q 001142 120 QIKISS-PGVNGFALNK---------LKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNL 189 (1142)
Q Consensus 120 ~Ls~N~-l~~~~~~~~~---------L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L 189 (1142)
+|++|+ ++.+|..+.. +++|++|+|++|.+. .+|..+..+++|+.|+|++|.++.+|..++.+++|
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~----~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L 231 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR----SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKL 231 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC----CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTC
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC----cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCC
Confidence 999865 7777766554 889999999986543 67778888999999999999999888888889999
Q ss_pred CEEEccCCCCC-ccchhhcCCCCCCEEEccCCCCC-ccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCC
Q 001142 190 EQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1142)
Q Consensus 190 ~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N 267 (1142)
++|+|++|++. .+|..++.+++|+.|+|++|.+. .+|..+.++++|+.|+|++|++.+.+|..+.++++|+.+++..|
T Consensus 232 ~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 232 EELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp CEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred CEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 99999998877 77888889999999999998776 88888888999999999999999988889999999999999888
Q ss_pred CCCC
Q 001142 268 KLLS 271 (1142)
Q Consensus 268 ~L~~ 271 (1142)
.+..
T Consensus 312 ~~~~ 315 (328)
T 4fcg_A 312 LQAQ 315 (328)
T ss_dssp GSCC
T ss_pred HHHH
Confidence 7765
No 265
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=2.3e-27 Score=276.24 Aligned_cols=246 Identities=19% Similarity=0.160 Sum_probs=178.7
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~ 95 (1142)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++.+|..|+.+ ++|++|+|++|.|+.+|.. |.++++|++
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~~~l~~L~~ 145 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNV---PLLTVLVLERNDLSSLPRGIFHNTPKLTT 145 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---TTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCC---CCCCEEECCCCccCcCCHHHhcCCCCCcE
Confidence 467778888888888887788888888888888888887777665444 7888888888888888765 577888888
Q ss_pred EEccCCCCCcCc-hhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCC---------------cccchhh
Q 001142 96 LKFFGNEINLFP-SEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPS---------------VLTLLSE 159 (1142)
Q Consensus 96 L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~---------------~~~lp~~ 159 (1142)
|+|++|.|+.++ ..|.++++|+.|+|++|.+...+ +..+++|+.|++++|.+... ...+|..
T Consensus 146 L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~ 223 (390)
T 3o6n_A 146 LSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP 223 (390)
T ss_dssp EECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECC
T ss_pred EECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccccccCCCCcceEEECCCCeeeecccc
Confidence 888888887664 44777888888888888766553 44455555555554432211 1111211
Q ss_pred hcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCccccCCCCCCEE
Q 001142 160 IAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGLYLLQRLENL 238 (1142)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L 238 (1142)
..++|+.|++++|.++.+ ..+..+++|+.|+|++|.|+.+ |..+..+++|+.|+|++|+|+.+|..+..+++|+.|
T Consensus 224 --~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L 300 (390)
T 3o6n_A 224 --VNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVL 300 (390)
T ss_dssp --CCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEE
T ss_pred --ccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEE
Confidence 235677888888888765 4577788888888888888855 677888888888888888888887777778888888
Q ss_pred eCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 239 DLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 239 ~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|++|+|+++++ .+..+++|+.|+|++|+++.
T Consensus 301 ~L~~n~l~~~~~-~~~~l~~L~~L~L~~N~i~~ 332 (390)
T 3o6n_A 301 DLSHNHLLHVER-NQPQFDRLENLYLDHNSIVT 332 (390)
T ss_dssp ECCSSCCCCCGG-GHHHHTTCSEEECCSSCCCC
T ss_pred ECCCCcceecCc-cccccCcCCEEECCCCccce
Confidence 888888887654 56777888888888888876
No 266
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=5.7e-28 Score=300.02 Aligned_cols=251 Identities=17% Similarity=0.193 Sum_probs=157.9
Q ss_pred CCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCC-CCC-CCcccccCC---CCCCCccEEEeecCCCCccCc--cc
Q 001142 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKT-VDF-PLIESYGNR---GGDNSVEGLYLYKNVLNLIPK--SV 87 (1142)
Q Consensus 15 ~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~-L~~-~~p~~~~~l---~~L~~L~~L~Ls~N~Lt~iP~--~l 87 (1142)
.-+.++.|.+..|++.+..+..|.++++|++|+|++|+ |++ .+|..++.+ ..+++|++|+|++|.|+.||. .|
T Consensus 247 ~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l 326 (636)
T 4eco_A 247 NLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSL 326 (636)
T ss_dssp GCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHH
T ss_pred ccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhh
Confidence 44578899999999999888999999999999999998 998 777766542 233678888888888888887 78
Q ss_pred cCCcCCcEEEccCCCCC-cCchhhcCCCCCCEEEccCCCCCCCcccccCCCC-CCEEECCCCCCCCCcccchhhhcCCC-
Q 001142 88 GRYEKLRNLKFFGNEIN-LFPSEVGNLLGLECLQIKISSPGVNGFALNKLKG-LKELELSKVPPRPSVLTLLSEIAGLK- 164 (1142)
Q Consensus 88 ~~L~~L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~-L~~L~Ls~n~~n~~~~~lp~~l~~L~- 164 (1142)
+++++|++|+|++|+|+ .+| .++++++|+.|+|++|.+..+|..+..+++ |++|++++|.+. .+|..+..+.
T Consensus 327 ~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~----~lp~~~~~~~l 401 (636)
T 4eco_A 327 QKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK----YIPNIFDAKSV 401 (636)
T ss_dssp TTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS----SCCSCCCTTCS
T ss_pred ccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc----ccchhhhhccc
Confidence 88888888888888887 777 677777777777777776666666777777 777777775443 3444443332
Q ss_pred -CCcEEEccCCCCC-ccCcccC-------CCCCCCEEEccCCCCCccchhhc-CCCCCCEEEccCCCCCccCccccCCC-
Q 001142 165 -CLTKLSVCHFSIR-YLPPEIG-------CLSNLEQLDLSFNKMKYLPTEIC-YLKALISLKVANNKLVELPSGLYLLQ- 233 (1142)
Q Consensus 165 -~L~~L~Ls~N~L~-~IP~~l~-------~L~~L~~L~Ls~N~L~~lP~~l~-~L~~L~~L~Ls~N~Ls~IP~~l~~L~- 233 (1142)
+|+.|++++|.++ .+|..|. .+++|+.|+|++|+|+.+|..+. .+++|+.|+|++|+|+.||..+....
T Consensus 402 ~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~ 481 (636)
T 4eco_A 402 SVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDEN 481 (636)
T ss_dssp SCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETT
T ss_pred CccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhcccc
Confidence 4555555555554 2344444 44455555555555554444332 24445555555554444444333211
Q ss_pred -------CCCEEeCcCCcCCCCCccccc--CCCCCCEEEccCCCCCC
Q 001142 234 -------RLENLDLSNNRLTSLGSLDLC--LMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 234 -------~L~~L~Ls~N~Ls~~~p~~l~--~L~~L~~L~Ls~N~L~~ 271 (1142)
+|+.|+|++|+|+.+++ .+. .+++|+.|+|++|++++
T Consensus 482 ~~~~~l~~L~~L~Ls~N~l~~lp~-~~~~~~l~~L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 482 ENFKNTYLLTSIDLRFNKLTKLSD-DFRATTLPYLVGIDLSYNSFSK 527 (636)
T ss_dssp EECTTGGGCCEEECCSSCCCBCCG-GGSTTTCTTCCEEECCSSCCSS
T ss_pred ccccccCCccEEECcCCcCCccCh-hhhhccCCCcCEEECCCCCCCC
Confidence 44444444444443322 332 44444444444444443
No 267
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=7.5e-28 Score=298.94 Aligned_cols=240 Identities=17% Similarity=0.143 Sum_probs=146.1
Q ss_pred CCCcccccCCCCC-Ccc-cCCCCCCCC------CCCCEEEccCCCCCCCCcc--cccCCCCCCCccEEEeecCCCC-ccC
Q 001142 16 GPIKEKLPSEANK-INN-EKNGSVNDD------DDDSVIDVSGKTVDFPLIE--SYGNRGGDNSVEGLYLYKNVLN-LIP 84 (1142)
Q Consensus 16 ~~~l~~L~~~~N~-i~~-l~~~~f~~l------~~L~~LdLs~N~L~~~~p~--~~~~l~~L~~L~~L~Ls~N~Lt-~iP 84 (1142)
-+.++.|.+..|+ |++ ..+..+..+ ++|++|+|++|+|+ .+|. .++.+ ++|++|+|++|.++ .+|
T Consensus 272 l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l---~~L~~L~L~~N~l~g~ip 347 (636)
T 4eco_A 272 LPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKM---KKLGMLECLYNQLEGKLP 347 (636)
T ss_dssp CSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTC---TTCCEEECCSCCCEEECC
T ss_pred CCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccC---CCCCEEeCcCCcCccchh
Confidence 3466667777776 665 333344433 66777777777776 4454 45433 66777777777776 666
Q ss_pred ccccCCcCCcEEEccCCCCCcCchhhcCCCC-CCEEEccCCCCCCCcccccCCC--CCCEEECCCCCCCCCcccchhhhc
Q 001142 85 KSVGRYEKLRNLKFFGNEINLFPSEVGNLLG-LECLQIKISSPGVNGFALNKLK--GLKELELSKVPPRPSVLTLLSEIA 161 (1142)
Q Consensus 85 ~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~-L~~L~Ls~N~l~~~~~~~~~L~--~L~~L~Ls~n~~n~~~~~lp~~l~ 161 (1142)
.|..+++|++|+|++|+|+.+|..++++++ |+.|+|++|.+..+|..+..+. +|++|++++|.+ .+.+|..|.
T Consensus 348 -~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l---~~~~p~~l~ 423 (636)
T 4eco_A 348 -AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEI---GSVDGKNFD 423 (636)
T ss_dssp -CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCT---TTTTTCSSC
T ss_pred -hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcC---CCcchhhhc
Confidence 666666777777777777666666666666 7777777776666665555543 666666666433 233344444
Q ss_pred -------CCCCCcEEEccCCCCCccCccc-CCCCCCCEEEccCCCCCccchhhcC-C-------CCCCEEEccCCCCCcc
Q 001142 162 -------GLKCLTKLSVCHFSIRYLPPEI-GCLSNLEQLDLSFNKMKYLPTEICY-L-------KALISLKVANNKLVEL 225 (1142)
Q Consensus 162 -------~L~~L~~L~Ls~N~L~~IP~~l-~~L~~L~~L~Ls~N~L~~lP~~l~~-L-------~~L~~L~Ls~N~Ls~I 225 (1142)
.+++|+.|+|++|.|+.+|..+ ..+++|+.|+|++|+|+.+|..+.. + ++|+.|+|++|+|+.|
T Consensus 424 ~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l 503 (636)
T 4eco_A 424 PLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTKL 503 (636)
T ss_dssp TTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCBC
T ss_pred ccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCcc
Confidence 5556666666666666665543 3466666666666666666544332 1 1566666666666666
Q ss_pred Ccccc--CCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEc
Q 001142 226 PSGLY--LLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNL 264 (1142)
Q Consensus 226 P~~l~--~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~L 264 (1142)
|..++ .+++|+.|+|++|+|++ +|..+..+++|+.|+|
T Consensus 504 p~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~L 543 (636)
T 4eco_A 504 SDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGI 543 (636)
T ss_dssp CGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEEC
T ss_pred ChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEEC
Confidence 66665 56666666666666666 3445556666666666
No 268
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.95 E-value=1.7e-26 Score=262.82 Aligned_cols=242 Identities=19% Similarity=0.230 Sum_probs=212.9
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNL 96 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L 96 (1142)
.+..+....+.++.++.... ++|++|+|++|+|++..+..|+. +++|++|+|++|.|+.+ |..|.++++|++|
T Consensus 32 ~l~~l~~~~~~l~~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKDLP---PDTALLDLQNNKITEIKDGDFKN---LKNLHTLILINNKISKISPGAFAPLVKLERL 105 (330)
T ss_dssp ETTEEECTTSCCCSCCCSCC---TTCCEEECCSSCCCCBCTTTTTT---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEE
T ss_pred CCeEEEecCCCccccCccCC---CCCeEEECCCCcCCEeChhhhcc---CCCCCEEECCCCcCCeeCHHHhcCCCCCCEE
Confidence 56778888899998875433 68999999999999988766654 49999999999999988 7889999999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001142 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1142)
+|++|+|+.+|..+. ++|+.|++++|.+..++ ..+..+++|+.|++++|.+.. .+..+..+.++++|+.|++++|.
T Consensus 106 ~Ls~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 106 YLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS-SGIENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp ECCSSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG-GGBCTTGGGGCTTCCEEECCSSC
T ss_pred ECCCCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc-cCcChhhccCCCCcCEEECCCCc
Confidence 999999999998876 89999999999977666 468999999999999976532 33567788999999999999999
Q ss_pred CCccCcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccC-ccccCCCCCCEEeCcCCcCCCCCcccc
Q 001142 176 IRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELP-SGLYLLQRLENLDLSNNRLTSLGSLDL 253 (1142)
Q Consensus 176 L~~IP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP-~~l~~L~~L~~L~Ls~N~Ls~~~p~~l 253 (1142)
++.+|..+. ++|+.|+|++|+|+.+ |..+..+++|+.|+|++|.|+.++ ..+..+++|+.|+|++|+|+.++. .+
T Consensus 183 l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~l 259 (330)
T 1xku_A 183 ITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPG-GL 259 (330)
T ss_dssp CCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCT-TT
T ss_pred cccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCCh-hh
Confidence 999998765 8999999999999976 688999999999999999999775 478889999999999999997654 79
Q ss_pred cCCCCCCEEEccCCCCCC
Q 001142 254 CLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 254 ~~L~~L~~L~Ls~N~L~~ 271 (1142)
..+++|+.|+|++|+|+.
T Consensus 260 ~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp TTCSSCCEEECCSSCCCC
T ss_pred ccCCCcCEEECCCCcCCc
Confidence 999999999999999987
No 269
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=1.1e-27 Score=305.10 Aligned_cols=246 Identities=16% Similarity=0.152 Sum_probs=167.3
Q ss_pred CCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCC-CCC-CCcccccCC----CCCCCccEEEeecCCCCccCc--c
Q 001142 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKT-VDF-PLIESYGNR----GGDNSVEGLYLYKNVLNLIPK--S 86 (1142)
Q Consensus 15 ~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~-L~~-~~p~~~~~l----~~L~~L~~L~Ls~N~Lt~iP~--~ 86 (1142)
.-+.|+.|.+..|++.+..+..|.++++|++|+|++|+ |++ .+|..++.+ ..+++|+.|+|++|.|+.||. .
T Consensus 489 ~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~ 568 (876)
T 4ecn_A 489 NLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASAS 568 (876)
T ss_dssp GCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHH
T ss_pred cCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhh
Confidence 34578899999999888888999999999999999998 988 777766533 355689999999999999998 8
Q ss_pred ccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCC-CCEEECCCCCCCCCcccchhhhcCCCC
Q 001142 87 VGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKG-LKELELSKVPPRPSVLTLLSEIAGLKC 165 (1142)
Q Consensus 87 l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~-L~~L~Ls~n~~n~~~~~lp~~l~~L~~ 165 (1142)
|.++++|++|+|++|+|+.|| .|+++++|+.|+|++|.+..+|..+..+++ |+.|+|++|.+. .+|..+..++.
T Consensus 569 l~~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~----~lp~~~~~~~~ 643 (876)
T 4ecn_A 569 LQKMVKLGLLDCVHNKVRHLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK----YIPNIFNAKSV 643 (876)
T ss_dssp HTTCTTCCEEECTTSCCCBCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC----SCCSCCCTTCS
T ss_pred hhcCCCCCEEECCCCCcccch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC----cCchhhhcccc
Confidence 999999999999999999888 888899999999999988888888888888 888888886654 34444443332
Q ss_pred --CcEEEccCCCC-----------------------------CccCccc-CCCCCCCEEEccCCCCCccchhhcCCC---
Q 001142 166 --LTKLSVCHFSI-----------------------------RYLPPEI-GCLSNLEQLDLSFNKMKYLPTEICYLK--- 210 (1142)
Q Consensus 166 --L~~L~Ls~N~L-----------------------------~~IP~~l-~~L~~L~~L~Ls~N~L~~lP~~l~~L~--- 210 (1142)
|+.|+|++|+| +.+|..+ ..+++|+.|+|++|+|+.+|..+....
T Consensus 644 ~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~ 723 (876)
T 4ecn_A 644 YVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGN 723 (876)
T ss_dssp SCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSC
T ss_pred CCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhcccccc
Confidence 45555555554 4444433 244455555555555554444333211
Q ss_pred -----CCCEEEccCCCCCccCcccc--CCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccC
Q 001142 211 -----ALISLKVANNKLVELPSGLY--LLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQY 266 (1142)
Q Consensus 211 -----~L~~L~Ls~N~Ls~IP~~l~--~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~ 266 (1142)
+|+.|+|++|+|+.||..++ .+++|+.|+|++|+|+++ |..+..+++|+.|+|++
T Consensus 724 l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~l-p~~l~~L~~L~~L~Ls~ 785 (876)
T 4ecn_A 724 YKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSSF-PTQPLNSSQLKAFGIRH 785 (876)
T ss_dssp CTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSSC-CCGGGGCTTCCEEECCC
T ss_pred ccccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCCcc-chhhhcCCCCCEEECCC
Confidence 45555555555555555444 455555555555555553 23444555555555543
No 270
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=2.3e-27 Score=302.31 Aligned_cols=262 Identities=17% Similarity=0.207 Sum_probs=191.4
Q ss_pred CCcccccCCCCCCcccCC-CCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcC-Cc
Q 001142 17 PIKEKLPSEANKINNEKN-GSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEK-LR 94 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~-~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~-L~ 94 (1142)
+.++.|.+..|+|+.++. ..|.++++|++|+|++|+|+ .+| .| +++++|+.|+|++|.|+.+|..|.++++ |+
T Consensus 548 ~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~---~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~ 622 (876)
T 4ecn_A 548 PKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLE-AF---GTNVKLTDLKLDYNQIEEIPEDFCAFTDQVE 622 (876)
T ss_dssp TTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCC-BCC-CC---CTTSEESEEECCSSCCSCCCTTSCEECTTCC
T ss_pred CCccEEEeeCCcCCccCChhhhhcCCCCCEEECCCCCcc-cch-hh---cCCCcceEEECcCCccccchHHHhhccccCC
Confidence 356666666666664433 25666666666666666666 444 33 3446666666666666666666666666 66
Q ss_pred EEEccCCCCCcCchhhcCCCC--CCEEEccCCCCCCCccc----cc--CCCCCCEEECCCCCCCCCcccchhhh-cCCCC
Q 001142 95 NLKFFGNEINLFPSEVGNLLG--LECLQIKISSPGVNGFA----LN--KLKGLKELELSKVPPRPSVLTLLSEI-AGLKC 165 (1142)
Q Consensus 95 ~L~Ls~N~L~~lP~~l~~L~~--L~~L~Ls~N~l~~~~~~----~~--~L~~L~~L~Ls~n~~n~~~~~lp~~l-~~L~~ 165 (1142)
.|+|++|.|+.+|..+..++. |+.|+|++|.+...... +. .+.+|+.|+|++|.+. .+|..+ ..+++
T Consensus 623 ~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~----~lp~~~~~~l~~ 698 (876)
T 4ecn_A 623 GLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ----KFPTELFATGSP 698 (876)
T ss_dssp EEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC----SCCHHHHHTTCC
T ss_pred EEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC----ccCHHHHccCCC
Confidence 667766666666666655443 66666666664432211 11 2346777777775543 456555 48899
Q ss_pred CcEEEccCCCCCccCcccCCC--------CCCCEEEccCCCCCccchhhc--CCCCCCEEEccCCCCCccCccccCCCCC
Q 001142 166 LTKLSVCHFSIRYLPPEIGCL--------SNLEQLDLSFNKMKYLPTEIC--YLKALISLKVANNKLVELPSGLYLLQRL 235 (1142)
Q Consensus 166 L~~L~Ls~N~L~~IP~~l~~L--------~~L~~L~Ls~N~L~~lP~~l~--~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L 235 (1142)
|+.|+|++|+|+.+|..+... ++|+.|+|++|+|+.+|..+. .+++|+.|+|++|+|+.||..++.+++|
T Consensus 699 L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L 778 (876)
T 4ecn_A 699 ISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQL 778 (876)
T ss_dssp CSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTC
T ss_pred CCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCC
Confidence 999999999999999876543 389999999999999999998 8999999999999999999999999999
Q ss_pred CEEeCcC------CcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhh-----ccCCCCCCCC
Q 001142 236 ENLDLSN------NRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWIC-----CNLEGNGKDS 290 (1142)
Q Consensus 236 ~~L~Ls~------N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~-----~~l~~n~l~~ 290 (1142)
+.|+|++ |++.+.+|..|..+++|+.|+|++|+|.. ||..+. ++++.|.+..
T Consensus 779 ~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L~~---Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 779 KAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRK---VDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp CEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCB---CCSCCCSSSCEEECCSCTTCE
T ss_pred CEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCCCc---cCHhhcCCCCEEECCCCCCCc
Confidence 9999976 88999999999999999999999999954 776543 4444444433
No 271
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=3.6e-27 Score=290.59 Aligned_cols=246 Identities=19% Similarity=0.169 Sum_probs=182.3
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~ 95 (1142)
+.+..|.+..|+|+.+.+..|.++++|++|+|++|.|++.+|..|+.+ ++|++|+|++|.|+.+|.. |.++++|++
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~~~l~~L~~ 151 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNV---PLLTVLVLERNDLSSLPRGIFHNTPKLTT 151 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---TTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCC---CCCCEEEeeCCCCCCCCHHHhccCCCCCE
Confidence 357777777778887777778888888888888888877777655444 7788888888888777665 577778888
Q ss_pred EEccCCCCCcCc-hhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCC---------------cccchhh
Q 001142 96 LKFFGNEINLFP-SEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPS---------------VLTLLSE 159 (1142)
Q Consensus 96 L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~---------------~~~lp~~ 159 (1142)
|+|++|.|+.++ ..|+++++|+.|+|++|.+..++ +..+++|+.|++++|.+... +..+|..
T Consensus 152 L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~ 229 (597)
T 3oja_B 152 LSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP 229 (597)
T ss_dssp EECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECS
T ss_pred EEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccc
Confidence 888888877554 35777788888888777766554 44455555555555433211 0111111
Q ss_pred hcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCccccCCCCCCEE
Q 001142 160 IAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGLYLLQRLENL 238 (1142)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L 238 (1142)
+ .++|+.|+|++|.++.+ ..++.+++|+.|+|++|.|+.+ |..|+.+++|+.|+|++|.|+.+|..+..+++|+.|
T Consensus 230 ~--~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L 306 (597)
T 3oja_B 230 V--NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVL 306 (597)
T ss_dssp C--CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEE
T ss_pred c--CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEE
Confidence 1 24677777888877764 5678889999999999999855 788889999999999999999888888888999999
Q ss_pred eCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 239 DLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 239 ~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|++|.|+++++ .+..+++|+.|+|++|+|+.
T Consensus 307 ~Ls~N~l~~i~~-~~~~l~~L~~L~L~~N~l~~ 338 (597)
T 3oja_B 307 DLSHNHLLHVER-NQPQFDRLENLYLDHNSIVT 338 (597)
T ss_dssp ECCSSCCCCCGG-GHHHHTTCSEEECCSSCCCC
T ss_pred ECCCCCCCccCc-ccccCCCCCEEECCCCCCCC
Confidence 999999997654 67888999999999999887
No 272
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=1e-26 Score=285.87 Aligned_cols=250 Identities=18% Similarity=0.178 Sum_probs=212.8
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCc
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLR 94 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~ 94 (1142)
++.++.|.+..|+|+.+.+..|.++++|++|||++|+|++..|..|+.+ ++|++|+|++|.++.+ |..|.++++|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 108 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQ---HRLDTLVLTANPLIFMAETALSGPKALK 108 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTC---TTCCEEECTTCCCSEECTTTTSSCTTCC
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCc---cccCeeeCCCCcccccChhhhccccccc
Confidence 4468999999999999999999999999999999999999888877655 9999999999999977 67899999999
Q ss_pred EEEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc--EEE
Q 001142 95 NLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT--KLS 170 (1142)
Q Consensus 95 ~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~--~L~ 170 (1142)
+|+|++|.|+.+ |..++++++|++|+|++|.+..++ ..+..+++|++|++++|.+. ...|..|..+++|+ .|+
T Consensus 109 ~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~---~~~~~~~~~l~~L~~l~L~ 185 (606)
T 3t6q_A 109 HLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH---YLSKEDMSSLQQATNLSLN 185 (606)
T ss_dssp EEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC---EECHHHHHTTTTCCSEEEE
T ss_pred EeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc---ccChhhhhhhcccceeEEe
Confidence 999999999987 667999999999999999987753 45556999999999996543 44566788888888 899
Q ss_pred ccCCCCCccCcccCCCC----------------------------------------------------CCCEEEccCCC
Q 001142 171 VCHFSIRYLPPEIGCLS----------------------------------------------------NLEQLDLSFNK 198 (1142)
Q Consensus 171 Ls~N~L~~IP~~l~~L~----------------------------------------------------~L~~L~Ls~N~ 198 (1142)
+++|.++.+++...... +|+.|+|++|.
T Consensus 186 l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~ 265 (606)
T 3t6q_A 186 LNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHY 265 (606)
T ss_dssp CTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCC
T ss_pred cCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCc
Confidence 99999986654322211 57778888888
Q ss_pred CCccch-hhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 199 MKYLPT-EICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 199 L~~lP~-~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
++.+|. .|..+++|+.|+|++|+++.+|..+..+++|+.|+|++|++++.+|..+..+++|+.|++++|.+.+
T Consensus 266 l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~ 339 (606)
T 3t6q_A 266 FFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRL 339 (606)
T ss_dssp CSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCC
T ss_pred cCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccc
Confidence 887754 4888889999999999999898888888999999999999998888888888999999999988764
No 273
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=2.3e-27 Score=270.95 Aligned_cols=212 Identities=24% Similarity=0.255 Sum_probs=197.3
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001142 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n 147 (1142)
.+++.|+|++|.|+.||..++++++|++|+|++|.|+.+|..++++++|++|+|++|.+..+|..+..+++|++|+|++|
T Consensus 81 ~~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n 160 (328)
T 4fcg_A 81 PGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRAC 160 (328)
T ss_dssp TTCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEE
T ss_pred cceeEEEccCCCchhcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCC
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCCCCcccchhhhc---------CCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEcc
Q 001142 148 PPRPSVLTLLSEIA---------GLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVA 218 (1142)
Q Consensus 148 ~~n~~~~~lp~~l~---------~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls 218 (1142)
+..+.+|..+. ++++|+.|+|++|+|+.+|..++.+++|+.|+|++|+|+.+|..++.+++|+.|+|+
T Consensus 161 ---~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls 237 (328)
T 4fcg_A 161 ---PELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLR 237 (328)
T ss_dssp ---TTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECT
T ss_pred ---CCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECc
Confidence 44556666654 499999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-ccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhccCC
Q 001142 219 NNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLE 284 (1142)
Q Consensus 219 ~N~Ls-~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~ 284 (1142)
+|.+. .+|..++.+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.+ .+|.++.-...
T Consensus 238 ~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~--~iP~~l~~L~~ 302 (328)
T 4fcg_A 238 GCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS--RLPSLIAQLPA 302 (328)
T ss_dssp TCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC--CCCGGGGGSCT
T ss_pred CCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh--hccHHHhhccC
Confidence 99887 889999999999999999999999999999999999999999999988 79988765443
No 274
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.95 E-value=9.9e-27 Score=265.18 Aligned_cols=241 Identities=18% Similarity=0.238 Sum_probs=210.7
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNL 96 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L 96 (1142)
.+..+.+..++++.++...+ ++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.+ |..|.++++|++|
T Consensus 34 ~l~~l~~~~~~l~~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 107 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEIS---PDTTLLDLQNNDISELRKDDFKGL---QHLYALVLVNNKISKIHEKAFSPLRKLQKL 107 (332)
T ss_dssp ETTEEECCSSCCSSCCSCCC---TTCCEEECCSSCCCEECTTTTTTC---TTCCEEECCSSCCCEECGGGSTTCTTCCEE
T ss_pred cCCEEECCCCCccccCCCCC---CCCeEEECCCCcCCccCHhHhhCC---CCCcEEECCCCccCccCHhHhhCcCCCCEE
Confidence 47788888999998876543 689999999999998887766544 9999999999999987 6789999999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001142 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1142)
+|++|+|+.+|..+. ++|++|+|++|.+..++. .+..+++|+.|++++|.+.. .+..|..+..+ +|+.|++++|+
T Consensus 108 ~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~~l-~L~~L~l~~n~ 183 (332)
T 2ft3_A 108 YISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN-SGFEPGAFDGL-KLNYLRISEAK 183 (332)
T ss_dssp ECCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG-GGSCTTSSCSC-CCSCCBCCSSB
T ss_pred ECCCCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc-CCCCcccccCC-ccCEEECcCCC
Confidence 999999999998876 899999999999887764 58999999999999976532 23556777777 89999999999
Q ss_pred CCccCcccCCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeCcCCcCCCCCcccc
Q 001142 176 IRYLPPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDL 253 (1142)
Q Consensus 176 L~~IP~~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~~p~~l 253 (1142)
++.+|..+. ++|+.|+|++|+|+.++ ..+..+++|+.|+|++|+|+.++. .+..+++|+.|+|++|+|+.+++ .+
T Consensus 184 l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~l 260 (332)
T 2ft3_A 184 LTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPA-GL 260 (332)
T ss_dssp CSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCT-TG
T ss_pred CCccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecCh-hh
Confidence 999998765 79999999999999775 789999999999999999997754 78889999999999999997654 79
Q ss_pred cCCCCCCEEEccCCCCCC
Q 001142 254 CLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 254 ~~L~~L~~L~Ls~N~L~~ 271 (1142)
..+++|+.|+|++|+++.
T Consensus 261 ~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 261 PDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp GGCTTCCEEECCSSCCCB
T ss_pred hcCccCCEEECCCCCCCc
Confidence 999999999999999987
No 275
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=1e-27 Score=275.73 Aligned_cols=245 Identities=18% Similarity=0.197 Sum_probs=140.5
Q ss_pred ccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEEccC
Q 001142 22 LPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLKFFG 100 (1142)
Q Consensus 22 L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~Ls~ 100 (1142)
.....|+|+.++...+ ++|++|+|++|+|++..+..|+ ++++|++|+|++|.|+.++ ..|.++++|++|+|++
T Consensus 36 c~~~~~~l~~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~---~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 36 CKGSSGSLNSIPSGLT---EAVKSLDLSNNRITYISNSDLQ---RCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp EECCSTTCSSCCTTCC---TTCCEEECTTSCCCEECTTTTT---TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eeCCCCCccccccccc---ccCcEEECCCCcCcccCHHHhc---cCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 4444555555544322 2455555555555544443332 2255555555555555442 3455555555555555
Q ss_pred CCCCcCchh-hcCCCCCCEEEccCCCCCCCcc--cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCC
Q 001142 101 NEINLFPSE-VGNLLGLECLQIKISSPGVNGF--ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1142)
Q Consensus 101 N~L~~lP~~-l~~L~~L~~L~Ls~N~l~~~~~--~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1142)
|+|+.+|.. |.++++|++|+|++|.+..++. .+..+++|++|++++|. ......+..|.++++|+.|++++|+++
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~--~~~~~~~~~~~~l~~L~~L~l~~n~l~ 187 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD--TFTKIQRKDFAGLTFLEELEIDASDLQ 187 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS--SCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc--cccccCHHHccCCCCCCEEECCCCCcC
Confidence 555555444 4555555555555555444443 45555555555555531 011112334455555555555555555
Q ss_pred cc-CcccCCCCCCCEEEccCCCCCccchhh-cCCCCCCEEEccCCCCCc-------------------------------
Q 001142 178 YL-PPEIGCLSNLEQLDLSFNKMKYLPTEI-CYLKALISLKVANNKLVE------------------------------- 224 (1142)
Q Consensus 178 ~I-P~~l~~L~~L~~L~Ls~N~L~~lP~~l-~~L~~L~~L~Ls~N~Ls~------------------------------- 224 (1142)
.+ |..+..+++|++|+|++|+++.+|..+ ..+++|+.|+|++|.++.
T Consensus 188 ~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~ 267 (353)
T 2z80_A 188 SYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLF 267 (353)
T ss_dssp EECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHH
T ss_pred ccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchh
Confidence 33 445555555555555555555554332 234555555555555543
Q ss_pred -cCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCC
Q 001142 225 -LPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1142)
Q Consensus 225 -IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1142)
+|..+..+++|+.|+|++|+|+.+++..|..+++|+.|+|++|+|.|.|+
T Consensus 268 ~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 268 QVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 56678889999999999999998887667999999999999999999553
No 276
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=9.5e-27 Score=284.36 Aligned_cols=126 Identities=20% Similarity=0.168 Sum_probs=107.7
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1142)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.||.. .+++|++|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~lp~~--~l~~L~~L 126 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFN---QDLEYLDVSHNRLQNISCC--PMASLRHL 126 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTC---TTCCEEECTTSCCCEECSC--CCTTCSEE
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCC---CCCCEEECCCCcCCccCcc--ccccCCEE
Confidence 579999999999999999999999999999999999999888776544 9999999999999999987 89999999
Q ss_pred EccCCCCCcC--chhhcCCCCCCEEEccCCCCCCCcccccCCCCC--CEEECCCCCC
Q 001142 97 KFFGNEINLF--PSEVGNLLGLECLQIKISSPGVNGFALNKLKGL--KELELSKVPP 149 (1142)
Q Consensus 97 ~Ls~N~L~~l--P~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L--~~L~Ls~n~~ 149 (1142)
+|++|+|+.+ |..|+++++|++|+|++|.+.. ..+..+++| +.|++++|.+
T Consensus 127 ~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 127 DLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQ--LDLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp ECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCT--TTTGGGTTSCEEEEEEEESSC
T ss_pred ECCCCCccccCchHhhcccCcccEEecCCCcccc--CchhhhhhceeeEEEeecccc
Confidence 9999999876 4789999999999999998664 235555555 7777777654
No 277
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=5e-27 Score=283.45 Aligned_cols=126 Identities=17% Similarity=0.112 Sum_probs=107.1
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1142)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.||.. .+++|++|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~lp~~--~l~~L~~L 95 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFN---QELEYLDLSHNKLVKISCH--PTVNLKHL 95 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTC---TTCCEEECCSSCCCEEECC--CCCCCSEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcc---cCCCEEecCCCceeecCcc--ccCCccEE
Confidence 689999999999999998999999999999999999999888877655 9999999999999999887 89999999
Q ss_pred EccCCCCCc--CchhhcCCCCCCEEEccCCCCCCCcccccCCCCC--CEEECCCCCC
Q 001142 97 KFFGNEINL--FPSEVGNLLGLECLQIKISSPGVNGFALNKLKGL--KELELSKVPP 149 (1142)
Q Consensus 97 ~Ls~N~L~~--lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L--~~L~Ls~n~~ 149 (1142)
+|++|+|+. +|..|+++++|++|+|++|.+.. ..+..+++| +.|++++|.+
T Consensus 96 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~l~~n~l 150 (520)
T 2z7x_B 96 DLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK--SSVLPIAHLNISKVLLVLGET 150 (520)
T ss_dssp ECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--GGGGGGTTSCEEEEEEEECTT
T ss_pred eccCCccccccchhhhccCCcceEEEecCcccch--hhccccccceeeEEEeecccc
Confidence 999999985 57899999999999999988653 334555555 5555555443
No 278
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=5.8e-27 Score=282.87 Aligned_cols=82 Identities=16% Similarity=0.111 Sum_probs=60.2
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCc--cCccccCCcCCc
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNL--IPKSVGRYEKLR 94 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~--iP~~l~~L~~L~ 94 (1142)
+.++.|.+..|+|+.+.+..|.++++|++|||++|+|+. +|.. .+++|++|+|++|.|+. +|..|+++++|+
T Consensus 45 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~-----~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 118 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH-----PTVNLKHLDLSFNAFDALPICKEFGNMSQLK 118 (520)
T ss_dssp TTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC-----CCCCCSEEECCSSCCSSCCCCGGGGGCTTCC
T ss_pred ccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc-----ccCCccEEeccCCccccccchhhhccCCcce
Confidence 467888888888888877888888888888888888874 3332 34777777777777775 456777777777
Q ss_pred EEEccCCCCC
Q 001142 95 NLKFFGNEIN 104 (1142)
Q Consensus 95 ~L~Ls~N~L~ 104 (1142)
+|+|++|.|+
T Consensus 119 ~L~L~~n~l~ 128 (520)
T 2z7x_B 119 FLGLSTTHLE 128 (520)
T ss_dssp EEEEEESSCC
T ss_pred EEEecCcccc
Confidence 7777776653
No 279
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=5.9e-27 Score=272.85 Aligned_cols=265 Identities=18% Similarity=0.186 Sum_probs=216.9
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~ 95 (1142)
+.+..+.+..|.|+.++...|..+++|++|+|++|.|++..+..|+. +++|++|+|++|.++.+| ..|.++++|++
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY---AHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTT---CTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccC---CCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 46788889999999999988999999999999999999888776654 499999999999999885 46899999999
Q ss_pred EEccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhh-------------h
Q 001142 96 LKFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSE-------------I 160 (1142)
Q Consensus 96 L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~-------------l 160 (1142)
|+|++|.|+.+|.. |.++++|++|+|++|.+..++ ..+..+++|++|++++|.+.......... +
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccccc
Confidence 99999999999887 588999999999999976654 56999999999999998765432111100 1
Q ss_pred cCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEe
Q 001142 161 AGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLD 239 (1142)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~L~ 239 (1142)
....+|+.|++++|.++.+|.. .+++|+.|+|++|+|+.+ ..+..+++|+.|+|++|.|+.+ |..+..+++|+.|+
T Consensus 202 ~~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (390)
T 3o6n_A 202 AIPIAVEELDASHNSINVVRGP--VNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 278 (390)
T ss_dssp ECCSSCSEEECCSSCCCEEECC--CCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEE
T ss_pred CCCCcceEEECCCCeeeecccc--ccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEE
Confidence 2224466666666666666543 347899999999999987 4789999999999999999955 88899999999999
Q ss_pred CcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhh-------ccCCCCCCCCC
Q 001142 240 LSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWIC-------CNLEGNGKDSS 291 (1142)
Q Consensus 240 Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~-------~~l~~n~l~~~ 291 (1142)
|++|+|++++. .+..+++|+.|+|++|+++. +|..+. +.++.|.+...
T Consensus 279 L~~n~l~~~~~-~~~~l~~L~~L~L~~n~l~~---~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 279 ISNNRLVALNL-YGQPIPTLKVLDLSHNHLLH---VERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp CCSSCCCEEEC-SSSCCTTCCEEECCSSCCCC---CGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CCCCcCcccCc-ccCCCCCCCEEECCCCccee---cCccccccCcCCEEECCCCcccee
Confidence 99999999754 67889999999999999986 665544 45555555443
No 280
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=9.7e-27 Score=284.27 Aligned_cols=83 Identities=20% Similarity=0.117 Sum_probs=70.7
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC--ccccCCcCC
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP--KSVGRYEKL 93 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP--~~l~~L~~L 93 (1142)
-+.++.|.+..|+|+.+.+..|.++++|++|||++|+|+.. |.. .+++|++|+|++|.|+.+| ..|.++++|
T Consensus 75 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-p~~-----~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L 148 (562)
T 3a79_B 75 LSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNI-SCC-----PMASLRHLDLSFNDFDVLPVCKEFGNLTKL 148 (562)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEE-CSC-----CCTTCSEEECCSSCCSBCCCCGGGGGCTTC
T ss_pred CCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCcc-Ccc-----ccccCCEEECCCCCccccCchHhhcccCcc
Confidence 34889999999999999999999999999999999999854 432 4589999999999998764 678888889
Q ss_pred cEEEccCCCCC
Q 001142 94 RNLKFFGNEIN 104 (1142)
Q Consensus 94 ~~L~Ls~N~L~ 104 (1142)
++|+|++|+|+
T Consensus 149 ~~L~L~~n~l~ 159 (562)
T 3a79_B 149 TFLGLSAAKFR 159 (562)
T ss_dssp CEEEEECSBCC
T ss_pred cEEecCCCccc
Confidence 88888888765
No 281
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=1.3e-26 Score=284.83 Aligned_cols=252 Identities=17% Similarity=0.189 Sum_probs=175.1
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~ 95 (1142)
+.+..|.+..|+|+.+.+..|.++++|++|||++|+|++..|..|+.+ ++|++|+|++|.|+.+ |..|.++++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l---~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 108 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGL---HHLSNLILTGNPIQSFSPGSFSGLTSLEN 108 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC---TTCCEEECTTCCCCCCCTTSSTTCTTCCE
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhch---hhcCEeECCCCcccccChhhcCCcccCCE
Confidence 467778888888888887788888888888888888887777665444 7888888888888766 667788888888
Q ss_pred EEccCCCCCcCc-hhhcCCCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCCCCCCccc-----------------
Q 001142 96 LKFFGNEINLFP-SEVGNLLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVPPRPSVLT----------------- 155 (1142)
Q Consensus 96 L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~l~~--~~~~~~~L~~L~~L~Ls~n~~n~~~~~----------------- 155 (1142)
|+|++|.|+.+| ..++++++|++|+|++|.+.. +|..+..+++|++|++++|.+......
T Consensus 109 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l 188 (606)
T 3vq2_A 109 LVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188 (606)
T ss_dssp EECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEEC
T ss_pred EEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeec
Confidence 888888887665 557778888888888877653 567777788888777777654321100
Q ss_pred -------chh----------------------------------------------------------------------
Q 001142 156 -------LLS---------------------------------------------------------------------- 158 (1142)
Q Consensus 156 -------lp~---------------------------------------------------------------------- 158 (1142)
++.
T Consensus 189 ~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 189 SLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred cCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence 000
Q ss_pred ---------------------------------hhcCCCCCcEEEccCCCCCccCc--------------------ccCC
Q 001142 159 ---------------------------------EIAGLKCLTKLSVCHFSIRYLPP--------------------EIGC 185 (1142)
Q Consensus 159 ---------------------------------~l~~L~~L~~L~Ls~N~L~~IP~--------------------~l~~ 185 (1142)
.+..+++|+.|++++|.++.+|. .+..
T Consensus 269 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~ 348 (606)
T 3vq2_A 269 TYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVA 348 (606)
T ss_dssp CCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCC
T ss_pred cccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhcc
Confidence 12223344455555555444441 1334
Q ss_pred CCCCCEEEccCCCCCcc---chhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCc-ccccCCCCCCE
Q 001142 186 LSNLEQLDLSFNKMKYL---PTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS-LDLCLMHNLQN 261 (1142)
Q Consensus 186 L~~L~~L~Ls~N~L~~l---P~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p-~~l~~L~~L~~ 261 (1142)
+++|++|+|++|+++.+ |..+..+++|+.|+|++|.++.+|..+..+++|+.|+|++|++++.+| ..+..+++|+.
T Consensus 349 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 56677777777777644 677777778888888888777777777777777777777777777766 56777777777
Q ss_pred EEccCCCCCC
Q 001142 262 LNLQYNKLLS 271 (1142)
Q Consensus 262 L~Ls~N~L~~ 271 (1142)
|++++|++++
T Consensus 429 L~l~~n~l~~ 438 (606)
T 3vq2_A 429 LDISYTNTKI 438 (606)
T ss_dssp EECTTSCCEE
T ss_pred EECcCCCCCc
Confidence 7777777765
No 282
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.94 E-value=7e-27 Score=287.28 Aligned_cols=247 Identities=20% Similarity=0.189 Sum_probs=163.2
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCc-cccCCcCCc
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPK-SVGRYEKLR 94 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~-~l~~L~~L~ 94 (1142)
+.++.|.+..|+|+.++. .|.++++|++|+|++|.+++..|..++.+ ++|++|+|++|.++ .+|. .+..+++|+
T Consensus 278 ~~L~~L~l~~n~l~~lp~-~l~~l~~L~~L~l~~n~l~~~~~~~~~~l---~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 353 (606)
T 3t6q_A 278 SGLQELDLTATHLSELPS-GLVGLSTLKKLVLSANKFENLCQISASNF---PSLTHLSIKGNTKRLELGTGCLENLENLR 353 (606)
T ss_dssp TTCSEEECTTSCCSCCCS-SCCSCTTCCEEECTTCCCSBGGGGCGGGC---TTCSEEECCSCSSCCBCCSSTTTTCTTCC
T ss_pred cCCCEEeccCCccCCCCh-hhcccccCCEEECccCCcCcCchhhhhcc---CcCCEEECCCCCcccccchhhhhccCcCC
Confidence 477888888888886643 57778888888888888887777666544 77777777777766 5654 367777777
Q ss_pred EEEccCCCCCcC---chhhcCCCCCCEEEccCCCCCC-CcccccCCCCCCEEECCCCCCCCCcccch-hhhcCCCCCcEE
Q 001142 95 NLKFFGNEINLF---PSEVGNLLGLECLQIKISSPGV-NGFALNKLKGLKELELSKVPPRPSVLTLL-SEIAGLKCLTKL 169 (1142)
Q Consensus 95 ~L~Ls~N~L~~l---P~~l~~L~~L~~L~Ls~N~l~~-~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp-~~l~~L~~L~~L 169 (1142)
+|+|++|.++.+ |..+.++++|+.|+|++|.+.. .+..+..+++|++|++++|.+. ...| ..+.++++|+.|
T Consensus 354 ~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~---~~~~~~~~~~l~~L~~L 430 (606)
T 3t6q_A 354 ELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLK---VKDAQSPFQNLHLLKVL 430 (606)
T ss_dssp EEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEE---CCTTCCTTTTCTTCCEE
T ss_pred EEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCC---CcccchhhhCcccCCEE
Confidence 777777777644 4556777777777777776443 3456666777777777764432 2222 235666666677
Q ss_pred EccCCCCCcc-CcccCCCCCCCEEEccCCCCCc--cc--hhhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeCcCC
Q 001142 170 SVCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKY--LP--TEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNN 243 (1142)
Q Consensus 170 ~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~--lP--~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~L~Ls~N 243 (1142)
++++|.++.+ |..+..+++|++|+|++|+|+. +| ..+..+++|+.|+|++|+++.+ |..+..+++|+.|+|++|
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 510 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC
Confidence 7777666643 4456666666666666666653 22 4466666666666666666644 455666666666666666
Q ss_pred cCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 244 ~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|++.+|..+..++.| .|+|++|++++
T Consensus 511 ~l~~~~~~~l~~l~~L-~L~L~~N~l~~ 537 (606)
T 3t6q_A 511 RLTSSSIEALSHLKGI-YLNLASNHISI 537 (606)
T ss_dssp CCCGGGGGGGTTCCSC-EEECCSSCCCC
T ss_pred ccCcCChhHhCccccc-EEECcCCcccc
Confidence 6666666666666666 66666666665
No 283
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=1.8e-26 Score=257.16 Aligned_cols=230 Identities=21% Similarity=0.220 Sum_probs=188.0
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcC-chhhcCCCCCCEEEc
Q 001142 44 SVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLF-PSEVGNLLGLECLQI 121 (1142)
Q Consensus 44 ~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~L 121 (1142)
+++++++++++.++.. + .++|++|+|++|.|+.+|. .|..+++|++|+|++|.|+.+ |..|.++++|++|+|
T Consensus 14 ~~~~c~~~~l~~ip~~-~-----~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 87 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVG-I-----PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDL 87 (285)
T ss_dssp CEEECCSSCCSSCCTT-C-----CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred eEEEcCcCCcccCCcC-C-----CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeC
Confidence 5778888877765432 1 2577888888888887753 577788888888888888766 666777888888888
Q ss_pred cCCC-CCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCC
Q 001142 122 KISS-PGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNK 198 (1142)
Q Consensus 122 s~N~-l~~~-~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~ 198 (1142)
++|. +..+ +..+..+++|++|++++|.+. ...|..|.++++|+.|++++|+++.+|. .|..+++|+.|+|++|+
T Consensus 88 ~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~---~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 164 (285)
T 1ozn_A 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ---ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR 164 (285)
T ss_dssp CSCTTCCCCCTTTTTTCTTCCEEECTTSCCC---CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCCccccCHHHhcCCcCCCEEECCCCcCC---EECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCc
Confidence 8886 6655 566778888888888885543 3345678889999999999999998876 47899999999999999
Q ss_pred CCccch-hhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCC
Q 001142 199 MKYLPT-EICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVP 276 (1142)
Q Consensus 199 L~~lP~-~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP 276 (1142)
|+.+|. .+..+++|+.|+|++|.|+.+ |..+..+++|+.|+|++|+|+++++..+..+++|+.|+|++|+|.|.|++.
T Consensus 165 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~ 244 (285)
T 1ozn_A 165 ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH
T ss_pred ccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH
Confidence 998875 588999999999999999965 888999999999999999999999888999999999999999999988776
Q ss_pred chhhcc
Q 001142 277 SWICCN 282 (1142)
Q Consensus 277 ~~~~~~ 282 (1142)
+...|.
T Consensus 245 ~~~~~l 250 (285)
T 1ozn_A 245 PLWAWL 250 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 284
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=8.3e-27 Score=287.33 Aligned_cols=265 Identities=19% Similarity=0.192 Sum_probs=215.9
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNL 96 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L 96 (1142)
.+..+.+..|.++.+++..|.++++|++|+|++|.|++.+|..|+.+ ++|++|+|++|.|+.+|+ .|+++++|++|
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYA---HTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTC---TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCC---CCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 46777888999999999899999999999999999999888766544 999999999999998865 57999999999
Q ss_pred EccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccch-------------hhhc
Q 001142 97 KFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLL-------------SEIA 161 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~n~~n~~~~~lp-------------~~l~ 161 (1142)
+|++|.|+.+|.. |+++++|++|+|++|.+..++ ..|..+++|++|+|++|.+........ ..+.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~ 208 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 208 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccccc
Confidence 9999999999887 589999999999999976654 579999999999999987654321110 0112
Q ss_pred CCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeC
Q 001142 162 GLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDL 240 (1142)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~L~L 240 (1142)
...+|+.|++++|.++.+|..+ .++|+.|+|++|.|+.+ ..++.+++|+.|+|++|.|+.+ |..++.+++|+.|+|
T Consensus 209 ~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 285 (597)
T 3oja_B 209 IPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 285 (597)
T ss_dssp CCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEEC
T ss_pred CCchhheeeccCCccccccccc--CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEEC
Confidence 2344566666666666555433 36899999999999875 6789999999999999999955 888999999999999
Q ss_pred cCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhh-------ccCCCCCCCCCC
Q 001142 241 SNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWIC-------CNLEGNGKDSSN 292 (1142)
Q Consensus 241 s~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~-------~~l~~n~l~~~~ 292 (1142)
++|+|+++++ .+..+++|+.|+|++|+++. +|..+. ++++.|.+...+
T Consensus 286 s~N~l~~l~~-~~~~l~~L~~L~Ls~N~l~~---i~~~~~~l~~L~~L~L~~N~l~~~~ 340 (597)
T 3oja_B 286 SNNRLVALNL-YGQPIPTLKVLDLSHNHLLH---VERNQPQFDRLENLYLDHNSIVTLK 340 (597)
T ss_dssp TTSCCCEEEC-SSSCCTTCCEEECCSSCCCC---CGGGHHHHTTCSEEECCSSCCCCCC
T ss_pred CCCCCCCCCc-ccccCCCCcEEECCCCCCCc---cCcccccCCCCCEEECCCCCCCCcC
Confidence 9999999754 67889999999999999986 665554 455666655443
No 285
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.94 E-value=5.3e-27 Score=300.40 Aligned_cols=261 Identities=19% Similarity=0.166 Sum_probs=187.0
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~ 95 (1142)
+.++.|.+..|+|..+.+..|..+++|++|+|++|+|++..|..|+. +++|++|+|++|.|+.+ |..|..+++|++
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~---l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYG---LDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTT---CSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcC---CCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 47888999999999999999999999999999999999888876654 48999999999999977 668999999999
Q ss_pred EEccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcc------------------cc
Q 001142 96 LKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVL------------------TL 156 (1142)
Q Consensus 96 L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~------------------~l 156 (1142)
|+|++|.|+.++. .|.++++|+.|+|++|.+..++. +++|+.|++++|.+..... ..
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~----~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~ 418 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHF----IPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDI 418 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSS----CCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTT
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccC----CCCcchhccCCCCcccccccccccceeecccCccccCch
Confidence 9999999997765 48889999999999988765442 3333333333332221100 00
Q ss_pred hhhhcCCCCCcEEEccCCCCCcc-------------------------------CcccCCCCCCCEEEccCCCCCccc-h
Q 001142 157 LSEIAGLKCLTKLSVCHFSIRYL-------------------------------PPEIGCLSNLEQLDLSFNKMKYLP-T 204 (1142)
Q Consensus 157 p~~l~~L~~L~~L~Ls~N~L~~I-------------------------------P~~l~~L~~L~~L~Ls~N~L~~lP-~ 204 (1142)
+..+.++++|+.|+|++|+++.+ |..|..+++|+.|+|++|+|+.+| .
T Consensus 419 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 498 (844)
T 3j0a_A 419 LYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPG 498 (844)
T ss_dssp HHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTT
T ss_pred hhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChh
Confidence 11223444444444444444432 223556677777777777777654 4
Q ss_pred hhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhccCC
Q 001142 205 EICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLE 284 (1142)
Q Consensus 205 ~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~ 284 (1142)
.|..+++|+.|+|++|+|+.+|+.... ++|+.|+|++|+|++.+|..| .+|+.|+|++|++.|.|++.....|...
T Consensus 499 ~~~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~~f~~~~~~ 574 (844)
T 3j0a_A 499 VFSHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELSTFINWLNH 574 (844)
T ss_dssp SSSSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCCSHHHHHHH
T ss_pred HccchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccHHHHHHHHh
Confidence 467788888888888888877665544 678888888888888877554 4778888888888888887776666544
Q ss_pred CCCC
Q 001142 285 GNGK 288 (1142)
Q Consensus 285 ~n~l 288 (1142)
.+..
T Consensus 575 ~~~~ 578 (844)
T 3j0a_A 575 TNVT 578 (844)
T ss_dssp TTTT
T ss_pred cCcc
Confidence 4433
No 286
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.94 E-value=3.4e-26 Score=285.25 Aligned_cols=253 Identities=23% Similarity=0.195 Sum_probs=135.4
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCC--CcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCC
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFP--LIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKL 93 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~--~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L 93 (1142)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|.++.. ....|..+ ..++|+.|+|++|.++.+ |..|..+++|
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 407 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSL-AHSPLHILNLTKNKISKIESDAFSWLGHL 407 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGG-TTSCCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhccc-ccCcCceEECCCCCCCeEChhhhhCCCCC
Confidence 4788888888999988888888888888888887764332 11122211 113566666666666654 4456666666
Q ss_pred cEEEccCCCCC-cCc-hhhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEE
Q 001142 94 RNLKFFGNEIN-LFP-SEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLS 170 (1142)
Q Consensus 94 ~~L~Ls~N~L~-~lP-~~l~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~ 170 (1142)
++|+|++|.++ .+| ..+.++++|+.|+|++|.+. ..+..|..+++|+.|++++|.+.. .+.+|..|.++++|+.|+
T Consensus 408 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~p~~~~~l~~L~~L~ 486 (680)
T 1ziw_A 408 EVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKN-VDSSPSPFQPLRNLTILD 486 (680)
T ss_dssp CEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBC-TTCSSCTTTTCTTCCEEE
T ss_pred CEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccc-cccCCcccccCCCCCEEE
Confidence 66666666665 344 34556666666666666532 223344455555555555543321 123444445555555555
Q ss_pred ccCCCCCccCc-ccCCCCCCCEEEccCCCCCccch---------hhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEe
Q 001142 171 VCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPT---------EICYLKALISLKVANNKLVELPSG-LYLLQRLENLD 239 (1142)
Q Consensus 171 Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~lP~---------~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~L~ 239 (1142)
|++|+|+.+|. .|..+++|++|+|++|+|+.++. .+..+++|+.|+|++|+|+.||.. +.++++|+.|+
T Consensus 487 Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 566 (680)
T 1ziw_A 487 LSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIID 566 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeE
Confidence 55555554433 24445555555555555443311 134444455555555555444432 33444455555
Q ss_pred CcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 240 LSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 240 Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
|++|+|+++++..|..+++|+.|+|++|+|++
T Consensus 567 Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ 598 (680)
T 1ziw_A 567 LGLNNLNTLPASVFNNQVSLKSLNLQKNLITS 598 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCCCB
T ss_pred CCCCCCCcCCHhHhCCCCCCCEEECCCCcCCc
Confidence 55555554444444444444444444444444
No 287
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=1.6e-26 Score=284.18 Aligned_cols=258 Identities=21% Similarity=0.138 Sum_probs=172.7
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCccc-----------------ccCCCCCCCccEEEeecCCC
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIES-----------------YGNRGGDNSVEGLYLYKNVL 80 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~-----------------~~~l~~L~~L~~L~Ls~N~L 80 (1142)
.++.|.+..|.++.++ .|..+++|++|+|++|.+ +.+|.. ...++.+++|++|+|++|.+
T Consensus 286 ~L~~L~l~~~~~~~l~--~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l 362 (606)
T 3vq2_A 286 NVSAMSLAGVSIKYLE--DVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNAL 362 (606)
T ss_dssp TCSEEEEESCCCCCCC--CCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCE
T ss_pred CCCEEEecCccchhhh--hccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCcc
Confidence 4555666666665554 556666666666666666 333321 00223446667777777766
Q ss_pred Ccc---CccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCccc
Q 001142 81 NLI---PKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLT 155 (1142)
Q Consensus 81 t~i---P~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~--~~~~~L~~L~~L~Ls~n~~n~~~~~ 155 (1142)
+.+ |..+..+++|++|+|++|.++.+|..+.++++|+.|++++|.+...+ ..+..+++|++|++++|. ....
T Consensus 363 ~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~---l~~~ 439 (606)
T 3vq2_A 363 SFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTN---TKID 439 (606)
T ss_dssp EEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSC---CEEC
T ss_pred CCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCC---CCcc
Confidence 654 55667777777777777777777766777777777777777744433 356777777777777743 3445
Q ss_pred chhhhcCCCCCcEEEccCCCCCc--cCcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-CccccC
Q 001142 156 LLSEIAGLKCLTKLSVCHFSIRY--LPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYL 231 (1142)
Q Consensus 156 lp~~l~~L~~L~~L~Ls~N~L~~--IP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~ 231 (1142)
.|..+.++++|+.|++++|.++. +|..++.+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+.+ |..+..
T Consensus 440 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 519 (606)
T 3vq2_A 440 FDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQ 519 (606)
T ss_dssp CTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTT
T ss_pred chhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccC
Confidence 56667777777777777777774 566777777777777777777754 56677777777777777777744 667777
Q ss_pred CCCCCEEeCcCCcCCCCCcccccCCC-CCCEEEccCCCCCCCCCCCchhhcc
Q 001142 232 LQRLENLDLSNNRLTSLGSLDLCLMH-NLQNLNLQYNKLLSYCQVPSWICCN 282 (1142)
Q Consensus 232 L~~L~~L~Ls~N~Ls~~~p~~l~~L~-~L~~L~Ls~N~L~~~~~iP~~~~~~ 282 (1142)
+++|+.|+|++|+|+.+++ .+..++ +|+.|++++|+|.|.|++.+...|.
T Consensus 520 l~~L~~L~l~~N~l~~~p~-~~~~l~~~L~~l~l~~N~~~c~c~~~~~~~~l 570 (606)
T 3vq2_A 520 LYSLSTLDCSFNRIETSKG-ILQHFPKSLAFFNLTNNSVACICEHQKFLQWV 570 (606)
T ss_dssp CTTCCEEECTTSCCCCEES-CGGGSCTTCCEEECCSCCCCCSSTTHHHHTTT
T ss_pred CCcCCEEECCCCcCcccCH-hHhhhcccCcEEEccCCCcccCCccHHHHHHH
Confidence 7777777777777776554 466765 4777777777777777665444443
No 288
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=2e-26 Score=279.69 Aligned_cols=131 Identities=23% Similarity=0.279 Sum_probs=98.9
Q ss_pred cCCCCCcEEEccCCCCCc-cC---cccCCCCCCCEEEccCCCCCccc---hhhcCCCCCCEEEccCCCCCccCccccCCC
Q 001142 161 AGLKCLTKLSVCHFSIRY-LP---PEIGCLSNLEQLDLSFNKMKYLP---TEICYLKALISLKVANNKLVELPSGLYLLQ 233 (1142)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~-IP---~~l~~L~~L~~L~Ls~N~L~~lP---~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~ 233 (1142)
.++++|+.|++++|+++. +| ..++.+++|++|+|++|+|+.+| ..+..+++|+.|+|++|+|+.+|..+..++
T Consensus 331 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~ 410 (549)
T 2z81_A 331 QHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPE 410 (549)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCT
T ss_pred hcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccc
Confidence 358889999999999984 43 34678889999999999998775 357888999999999999998988888888
Q ss_pred CCCEEeCcCCcCCCCCccc-----------------ccCCCCCCEEEccCCCCCCCCCCCch------hhccCCCCCCCC
Q 001142 234 RLENLDLSNNRLTSLGSLD-----------------LCLMHNLQNLNLQYNKLLSYCQVPSW------ICCNLEGNGKDS 290 (1142)
Q Consensus 234 ~L~~L~Ls~N~Ls~~~p~~-----------------l~~L~~L~~L~Ls~N~L~~~~~iP~~------~~~~l~~n~l~~ 290 (1142)
+|+.|+|++|+|++++... +..+++|+.|+|++|+|+. ||.. ..++++.|.+..
T Consensus 411 ~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~---ip~~~~l~~L~~L~Ls~N~l~~ 487 (549)
T 2z81_A 411 KMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKT---LPDASLFPVLLVMKISRNQLKS 487 (549)
T ss_dssp TCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSS---CCCGGGCTTCCEEECCSSCCCC
T ss_pred cccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccCc---CCCcccCccCCEEecCCCccCC
Confidence 8888888888877654321 1368899999999999986 5543 224555555554
Q ss_pred CCCC
Q 001142 291 SNDD 294 (1142)
Q Consensus 291 ~~~~ 294 (1142)
..+.
T Consensus 488 ~~~~ 491 (549)
T 2z81_A 488 VPDG 491 (549)
T ss_dssp CCTT
T ss_pred cCHH
Confidence 4443
No 289
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=6.7e-28 Score=295.24 Aligned_cols=193 Identities=15% Similarity=0.095 Sum_probs=128.3
Q ss_pred eeeeecccCceEEEEEEE--CCccEEEEEEecccCCC--ChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCC
Q 001142 811 SCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGS--SADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWL 885 (1142)
Q Consensus 811 l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~--~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl~g~~~~~~~~ 885 (1142)
.....+.|+.|.+..++. -+..+++|++....... .....+.-.+.+.+|+++|+++ .|+||++++++++++..
T Consensus 238 w~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~- 316 (569)
T 4azs_A 238 WQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQS- 316 (569)
T ss_dssp EECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSE-
T ss_pred hhhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCE-
Confidence 344567777777666543 58889999976543222 1222222234568999999999 69999999999998664
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccc
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 965 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~ 965 (1142)
.||||||++|++|.++|.+ ..+++.. +|+.||+.||+|+|++|||||||||+|||++.+
T Consensus 317 -------------~yLVMEyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~d 375 (569)
T 4azs_A 317 -------------GWLVMEKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDAR 375 (569)
T ss_dssp -------------EEEEEECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTT
T ss_pred -------------EEEEEecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCC
Confidence 4999999999999999975 3456654 588999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001142 966 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1045 (1142)
Q Consensus 966 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLt 1045 (1142)
+.+||+|||+|+....... .....+||+.|||||++.+ .+..++|+||+|+++++|.+
T Consensus 376 -------g~vKL~DFGlAr~~~~~~~----------~~~t~vGTp~YmAPE~l~g-----~~~~~~d~~s~g~~~~~l~~ 433 (569)
T 4azs_A 376 -------QHARLIDFGSIVTTPQDCS----------WPTNLVQSFFVFVNELFAE-----NKSWNGFWRSAPVHPFNLPQ 433 (569)
T ss_dssp -------SCEEECCCTTEESCC---C----------CSHHHHHHHHHHHHHHC----------------------CCCCT
T ss_pred -------CCEEEeecccCeeCCCCCc----------cccCceechhhccHHHhCC-----CCCCcccccccccchhhhcc
Confidence 7899999999976543211 1234579999999999875 35678999999999887765
Q ss_pred CC
Q 001142 1046 LQ 1047 (1142)
Q Consensus 1046 G~ 1047 (1142)
+.
T Consensus 434 ~~ 435 (569)
T 4azs_A 434 PW 435 (569)
T ss_dssp TH
T ss_pred cc
Confidence 53
No 290
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=2.7e-25 Score=254.02 Aligned_cols=237 Identities=19% Similarity=0.217 Sum_probs=175.3
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1142)
-+.++.|.+..|+|+.+.. |..+++|++|+|++|.++.. + . +.++++|++|+|++|.++.+|. +..+++|++
T Consensus 65 ~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~-~-~---~~~l~~L~~L~l~~n~i~~~~~-~~~l~~L~~ 136 (347)
T 4fmz_A 65 LTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI-S-A---LQNLTNLRELYLNEDNISDISP-LANLTKMYS 136 (347)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-G---GTTCTTCSEEECTTSCCCCCGG-GTTCTTCCE
T ss_pred cCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc-h-H---HcCCCcCCEEECcCCcccCchh-hccCCceeE
Confidence 4578999999999998876 89999999999999999874 2 2 4556999999999999998876 888899999
Q ss_pred EEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001142 96 LKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1142)
Q Consensus 96 L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1142)
|+|++|.....+..+.++++|+.|++++|.+...+. +..+++|+.|++++|.+... +. +..+++|+.|++++|.
T Consensus 137 L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~----~~-~~~l~~L~~L~l~~n~ 210 (347)
T 4fmz_A 137 LNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDI----SP-LASLTSLHYFTAYVNQ 210 (347)
T ss_dssp EECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCC----GG-GGGCTTCCEEECCSSC
T ss_pred EECCCCCCcccccchhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCccccc----cc-ccCCCccceeecccCC
Confidence 999999655444458888889999998888776665 77888888888888665432 22 5566677777777777
Q ss_pred CCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccC
Q 001142 176 IRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCL 255 (1142)
Q Consensus 176 L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~ 255 (1142)
++.++. +..+++|+.|+|++|+++.+|. +..+++|+.|+|++|.++.++ .+..+++|+.|+|++|+|+++ + .+..
T Consensus 211 l~~~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~l~~n~l~~~-~-~~~~ 285 (347)
T 4fmz_A 211 ITDITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDIN-AVKDLTKLKMLNVGSNQISDI-S-VLNN 285 (347)
T ss_dssp CCCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCC-G-GGGG
T ss_pred CCCCch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCCh-hHhcCCCcCEEEccCCccCCC-h-hhcC
Confidence 665544 5666677777777777766655 666667777777777666653 466666677777777766665 2 4666
Q ss_pred CCCCCEEEccCCCCCC
Q 001142 256 MHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 256 L~~L~~L~Ls~N~L~~ 271 (1142)
+++|+.|+|++|++++
T Consensus 286 l~~L~~L~L~~n~l~~ 301 (347)
T 4fmz_A 286 LSQLNSLFLNNNQLGN 301 (347)
T ss_dssp CTTCSEEECCSSCCCG
T ss_pred CCCCCEEECcCCcCCC
Confidence 6667777777776654
No 291
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.94 E-value=1e-25 Score=274.32 Aligned_cols=130 Identities=16% Similarity=0.111 Sum_probs=103.9
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~ 95 (1142)
+.+..|.+..|+|+.+.+.+|.++++|++|||++|+|++..+..|+. +++|++|+|++|.++.+| ..|.++++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 104 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQS---LSHLSTLILTGNPIQSLALGAFSGLSSLQK 104 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTT---CTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccC---chhCCEEeCcCCcCCccCHhhhcCcccccc
Confidence 46888888888888888888888888888888888888877766544 488888888888888775 56888888888
Q ss_pred EEccCCCCCcCch-hhcCCCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCCC
Q 001142 96 LKFFGNEINLFPS-EVGNLLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVPP 149 (1142)
Q Consensus 96 L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~l~~--~~~~~~~L~~L~~L~Ls~n~~ 149 (1142)
|+|++|+|+.+|. .++++++|++|+|++|.+.. +|..+..+++|++|++++|.+
T Consensus 105 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l 161 (570)
T 2z63_A 105 LVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 161 (570)
T ss_dssp EECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCC
T ss_pred ccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCcc
Confidence 8888888887765 57788888888888888664 467788888888888877654
No 292
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.94 E-value=1.5e-25 Score=265.40 Aligned_cols=241 Identities=18% Similarity=0.186 Sum_probs=175.8
Q ss_pred cccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccC-ccccCCcCCcEEEc
Q 001142 21 KLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIP-KSVGRYEKLRNLKF 98 (1142)
Q Consensus 21 ~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP-~~l~~L~~L~~L~L 98 (1142)
.+....++++.++. +. ++|++|||++|+|++..|..|+.+ ++|++|+|++|.++ .+| ..|.++++|++|+|
T Consensus 14 ~~~c~~~~l~~lp~--l~--~~l~~L~Ls~n~i~~~~~~~~~~l---~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 14 NAICINRGLHQVPE--LP--AHVNYVDLSLNSIAELNETSFSRL---QDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp EEECCSSCCSSCCC--CC--TTCCEEECCSSCCCEECTTTTSSC---TTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred ccCcCCCCcccCCC--CC--CccCEEEecCCccCcCChhHhccC---ccccEEECcCCcccceECcccccccccCCEEeC
Confidence 46677788888876 22 789999999999999888777655 99999999999997 674 57999999999999
Q ss_pred cCCCCCcC-chhhcCCCCCCEEEccCCCCCC-Ccc--cccCCCCCCEEECCCCCCCCCcccchhh-hcCCCCCcEEEccC
Q 001142 99 FGNEINLF-PSEVGNLLGLECLQIKISSPGV-NGF--ALNKLKGLKELELSKVPPRPSVLTLLSE-IAGLKCLTKLSVCH 173 (1142)
Q Consensus 99 s~N~L~~l-P~~l~~L~~L~~L~Ls~N~l~~-~~~--~~~~L~~L~~L~Ls~n~~n~~~~~lp~~-l~~L~~L~~L~Ls~ 173 (1142)
++|.|+.+ |..|+++++|++|+|++|.+.. .+. .+..+++|++|+|++|.+.. ..|.. +.++++|+.|++++
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~---~~~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKK---IQPASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCS---CCCCGGGGGCTTCCEEECTT
T ss_pred CCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCc---cCcccccCCCCcccEEeCCC
Confidence 99999966 7789999999999999999764 333 38899999999999966543 33544 78899999999999
Q ss_pred CCCCcc-CcccCCC----------------------------------CCCCEEEccCCCCC------------------
Q 001142 174 FSIRYL-PPEIGCL----------------------------------SNLEQLDLSFNKMK------------------ 200 (1142)
Q Consensus 174 N~L~~I-P~~l~~L----------------------------------~~L~~L~Ls~N~L~------------------ 200 (1142)
|.++.+ |..+..+ ++|+.|+|++|+++
T Consensus 164 n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~ 243 (455)
T 3v47_A 164 NKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQS 243 (455)
T ss_dssp CCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEE
T ss_pred CcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceee
Confidence 998855 4333322 44555555555543
Q ss_pred ---------------------------------------------c-cchhhcCCCCCCEEEccCCCCCcc-CccccCCC
Q 001142 201 ---------------------------------------------Y-LPTEICYLKALISLKVANNKLVEL-PSGLYLLQ 233 (1142)
Q Consensus 201 ---------------------------------------------~-lP~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~ 233 (1142)
. +|..++.+++|+.|+|++|+|+.+ |..+..++
T Consensus 244 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 323 (455)
T 3v47_A 244 LILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLT 323 (455)
T ss_dssp EECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred EeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcc
Confidence 2 244455556666666666666543 44555566
Q ss_pred CCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 234 RLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 234 ~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|+.|+|++|+|++++|..|..+++|+.|+|++|+++.
T Consensus 324 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 361 (455)
T 3v47_A 324 HLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA 361 (455)
T ss_dssp TCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCE
T ss_pred cCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccc
Confidence 66666666666666655556666666666666666554
No 293
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=4.3e-25 Score=263.68 Aligned_cols=227 Identities=19% Similarity=0.154 Sum_probs=191.4
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1142)
+.++.|.+..|+|++++ .|..+++|++|+|++|+|++. | ++.+++|++|+|++|.|+.+| ++++++|++|
T Consensus 42 ~~L~~L~Ls~n~l~~~~--~l~~l~~L~~L~Ls~n~l~~~-~-----~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~~L 111 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDMT--GIEKLTGLTKLICTSNNITTL-D-----LSQNTNLTYLACDSNKLTNLD--VTPLTKLTYL 111 (457)
T ss_dssp TTCCEEECCSSCCCCCT--TGGGCTTCSEEECCSSCCSCC-C-----CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEE
T ss_pred CCCCEEEccCCCcccCh--hhcccCCCCEEEccCCcCCeE-c-----cccCCCCCEEECcCCCCceee--cCCCCcCCEE
Confidence 46788999999999884 689999999999999999985 2 345689999999999999886 8899999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCC
Q 001142 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1142)
+|++|+|+.+| ++++++|+.|++++|.+..++ +..+++|++|++++|. ..+.+ .+..+++|+.|++++|+|
T Consensus 112 ~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l~--l~~l~~L~~L~l~~n~---~~~~~--~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 112 NCDTNKLTKLD--VSQNPLLTYLNCARNTLTEID--VSHNTQLTELDCHLNK---KITKL--DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp ECCSSCCSCCC--CTTCTTCCEEECTTSCCSCCC--CTTCTTCCEEECTTCS---CCCCC--CCTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCeec--CCCCCcCCEEECCCCccceec--cccCCcCCEEECCCCC---ccccc--ccccCCcCCEEECCCCcc
Confidence 99999999886 889999999999999987764 7889999999999864 33333 477889999999999999
Q ss_pred CccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCC
Q 001142 177 RYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1142)
Q Consensus 177 ~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L 256 (1142)
+.+| ++.+++|+.|+|++|+|+.++ ++.+++|+.|+|++|+|+.+| +..+++|+.|+|++|+|+++++. .+
T Consensus 183 ~~l~--l~~l~~L~~L~l~~N~l~~~~--l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~~~~---~l 253 (457)
T 3bz5_A 183 TELD--VSQNKLLNRLNCDTNNITKLD--LNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTELDVS---TL 253 (457)
T ss_dssp CCCC--CTTCTTCCEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCCCT---TC
T ss_pred ceec--cccCCCCCEEECcCCcCCeec--cccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCcCHH---HC
Confidence 9987 788999999999999999884 888999999999999999988 88899999999999999998754 45
Q ss_pred CCCCEEEccCCCCCC
Q 001142 257 HNLQNLNLQYNKLLS 271 (1142)
Q Consensus 257 ~~L~~L~Ls~N~L~~ 271 (1142)
++|+.|++++|+|..
T Consensus 254 ~~L~~L~l~~n~L~~ 268 (457)
T 3bz5_A 254 SKLTTLHCIQTDLLE 268 (457)
T ss_dssp TTCCEEECTTCCCSC
T ss_pred CCCCEEeccCCCCCE
Confidence 555555555555443
No 294
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.93 E-value=1.2e-25 Score=287.84 Aligned_cols=272 Identities=19% Similarity=0.206 Sum_probs=179.7
Q ss_pred CCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCC-cccccCCCCCCCccEEEeecCCCCcc-CccccCCcC
Q 001142 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPL-IESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEK 92 (1142)
Q Consensus 15 ~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~-p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~ 92 (1142)
.++.+..|.+..|+|+.+.+.+|.++++|++|||++|.+.+.+ |..|+ ++++|++|+|++|.|+.+ |..|.++++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~---~L~~L~~L~Ls~N~l~~~~p~~~~~l~~ 98 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFR---NLPNLRILDLGSSKIYFLHPDAFQGLFH 98 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTS---SCTTCCEEECTTCCCCEECTTSSCSCSS
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhc---CCCCCCEEECCCCcCcccCHhHccCCcc
Confidence 3457889999999999999889999999999999999666555 55554 448899999999988876 778888999
Q ss_pred CcEEEccCCCCCc-Cchh--hcCCCCCCEEEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCccc------------
Q 001142 93 LRNLKFFGNEINL-FPSE--VGNLLGLECLQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLT------------ 155 (1142)
Q Consensus 93 L~~L~Ls~N~L~~-lP~~--l~~L~~L~~L~Ls~N~l~~~~--~~~~~L~~L~~L~Ls~n~~n~~~~~------------ 155 (1142)
|++|+|++|.|+. +|.. |.++++|+.|+|++|.+...+ ..|.++++|++|+|++|.+......
T Consensus 99 L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~ 178 (844)
T 3j0a_A 99 LFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSF 178 (844)
T ss_dssp CCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCC
T ss_pred cCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccce
Confidence 9999999998874 5555 888899999999888866543 4688888888888888765432111
Q ss_pred -----------chhhhcCC-------------------------------------------------------------
Q 001142 156 -----------LLSEIAGL------------------------------------------------------------- 163 (1142)
Q Consensus 156 -----------lp~~l~~L------------------------------------------------------------- 163 (1142)
.|..+..+
T Consensus 179 L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~ 258 (844)
T 3j0a_A 179 FSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQN 258 (844)
T ss_dssp CEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGT
T ss_pred EECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChh
Confidence 11111111
Q ss_pred -------CCCcEEEccCCCCCcc-CcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-CccccCCC
Q 001142 164 -------KCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYLLQ 233 (1142)
Q Consensus 164 -------~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~ 233 (1142)
++|+.|+|++|.+..+ |..|..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|.|+.+ |..+..++
T Consensus 259 ~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 338 (844)
T 3j0a_A 259 TFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLP 338 (844)
T ss_dssp TTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCT
T ss_pred hhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCC
Confidence 3445555555555533 33455556666666666666544 44555566666666666666544 44555566
Q ss_pred CCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhccCCCCCCC
Q 001142 234 RLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKD 289 (1142)
Q Consensus 234 ~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~ 289 (1142)
+|+.|+|++|+|+++++..|..+++|+.|+|++|.++.+..+|....+.++.|.+.
T Consensus 339 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~ 394 (844)
T 3j0a_A 339 KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLV 394 (844)
T ss_dssp TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCC
T ss_pred CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcc
Confidence 66666666666666665556666666666666666655444444444444444444
No 295
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.93 E-value=6.7e-25 Score=250.78 Aligned_cols=254 Identities=19% Similarity=0.256 Sum_probs=213.0
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1142)
+.+..|.+..|+++.++ .|..+++|++|+|++|++++..+ + .++++|++|+|++|.++.+| .|..+++|++|
T Consensus 44 ~~L~~L~l~~~~i~~~~--~~~~~~~L~~L~l~~n~i~~~~~--~---~~l~~L~~L~L~~n~i~~~~-~~~~l~~L~~L 115 (347)
T 4fmz_A 44 ESITKLVVAGEKVASIQ--GIEYLTNLEYLNLNGNQITDISP--L---SNLVKLTNLYIGTNKITDIS-ALQNLTNLREL 115 (347)
T ss_dssp TTCSEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--G---TTCTTCCEEECCSSCCCCCG-GGTTCTTCSEE
T ss_pred ccccEEEEeCCccccch--hhhhcCCccEEEccCCccccchh--h---hcCCcCCEEEccCCcccCch-HHcCCCcCCEE
Confidence 46788999999999885 48889999999999999987654 4 45599999999999999986 58999999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCC
Q 001142 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1142)
+|++|.|+.+|. +.++++|+.|++++|........+..+++|++|++++|.+.... . +..+++|+.|++++|.+
T Consensus 116 ~l~~n~i~~~~~-~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~----~-~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 116 YLNEDNISDISP-LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVT----P-IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp ECTTSCCCCCGG-GTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCG----G-GGGCTTCSEEECTTSCC
T ss_pred ECcCCcccCchh-hccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcCCch----h-hccCCCCCEEEccCCcc
Confidence 999999998887 88999999999999974444445899999999999996654332 2 78899999999999999
Q ss_pred CccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCC
Q 001142 177 RYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1142)
Q Consensus 177 ~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L 256 (1142)
+.++. +..+++|+.|++++|.++.++. +..+++|+.|+|++|.++.+|. +..+++|+.|+|++|.++++ + .+..+
T Consensus 190 ~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~-~-~~~~l 264 (347)
T 4fmz_A 190 EDISP-LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI-N-AVKDL 264 (347)
T ss_dssp CCCGG-GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC-G-GGTTC
T ss_pred ccccc-ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC-h-hHhcC
Confidence 98876 8889999999999999998866 8889999999999999998877 88899999999999999986 3 68899
Q ss_pred CCCCEEEccCCCCCCCC---CCCchhhccCCCCCCC
Q 001142 257 HNLQNLNLQYNKLLSYC---QVPSWICCNLEGNGKD 289 (1142)
Q Consensus 257 ~~L~~L~Ls~N~L~~~~---~iP~~~~~~l~~n~l~ 289 (1142)
++|+.|++++|+++.+. .+|....+.++.|.+.
T Consensus 265 ~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~ 300 (347)
T 4fmz_A 265 TKLKMLNVGSNQISDISVLNNLSQLNSLFLNNNQLG 300 (347)
T ss_dssp TTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCC
T ss_pred CCcCEEEccCCccCCChhhcCCCCCCEEECcCCcCC
Confidence 99999999999998731 2233333455555444
No 296
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.93 E-value=1.5e-26 Score=280.67 Aligned_cols=154 Identities=20% Similarity=0.203 Sum_probs=125.4
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~ 95 (1142)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++.+|..|+. +++|++|+|++|.|+.+|+. |+++++|++
T Consensus 26 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~---l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 102 (549)
T 2z81_A 26 AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYS---LGSLEHLDLSDNHLSSLSSSWFGPLSSLKY 102 (549)
T ss_dssp TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTT---CTTCCEEECTTSCCCSCCHHHHTTCTTCCE
T ss_pred CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccc---cccCCEEECCCCccCccCHHHhccCCCCcE
Confidence 57999999999999999999999999999999999999988876654 49999999999999988764 999999999
Q ss_pred EEccCCCCCc--CchhhcCCCCCCEEEccCCC-CCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEc
Q 001142 96 LKFFGNEINL--FPSEVGNLLGLECLQIKISS-PGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1142)
Q Consensus 96 L~Ls~N~L~~--lP~~l~~L~~L~~L~Ls~N~-l~~~~-~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~L 171 (1142)
|+|++|.|+. +|..++++++|++|+|++|. ++.++ ..+..+++|++|++++|.+. +..|..+..+++|+.|++
T Consensus 103 L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~---~~~~~~l~~l~~L~~L~l 179 (549)
T 2z81_A 103 LNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR---NYQSQSLKSIRDIHHLTL 179 (549)
T ss_dssp EECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC---EECTTTTTTCSEEEEEEE
T ss_pred EECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc---ccChhhhhccccCceEec
Confidence 9999999984 47789999999999999998 66665 57889999999999986543 334445544444444443
Q ss_pred cCCCC
Q 001142 172 CHFSI 176 (1142)
Q Consensus 172 s~N~L 176 (1142)
+.|.+
T Consensus 180 ~~n~~ 184 (549)
T 2z81_A 180 HLSES 184 (549)
T ss_dssp ECSBS
T ss_pred ccCcc
Confidence 33333
No 297
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.5e-25 Score=272.77 Aligned_cols=251 Identities=20% Similarity=0.210 Sum_probs=167.3
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~ 95 (1142)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|++++.+|..|+.+ ++|++|+|++|.++.+|. .|+++++|++
T Consensus 52 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~~~l~~L~~ 128 (570)
T 2z63_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGL---SSLQKLVAVETNLASLENFPIGHLKTLKE 128 (570)
T ss_dssp SSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTC---TTCCEEECTTSCCCCSTTCSCTTCTTCCE
T ss_pred CCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCc---cccccccccccccccCCCccccccccccE
Confidence 467888888888888888888888888888888888887776655443 777777777777777654 5677777777
Q ss_pred EEccCCCCCc--CchhhcCCCCCCEEEccCCCCCCCc-ccc---------------------------------------
Q 001142 96 LKFFGNEINL--FPSEVGNLLGLECLQIKISSPGVNG-FAL--------------------------------------- 133 (1142)
Q Consensus 96 L~Ls~N~L~~--lP~~l~~L~~L~~L~Ls~N~l~~~~-~~~--------------------------------------- 133 (1142)
|+|++|.|+. +|..|+++++|+.|++++|.+..++ ..+
T Consensus 129 L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~~L~~L~l~ 208 (570)
T 2z63_A 129 LNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLR 208 (570)
T ss_dssp EECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEE
T ss_pred EecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccCcceeEecc
Confidence 7777777763 5677777777777777666543221 111
Q ss_pred --------------------------------------------------------------------------------
Q 001142 134 -------------------------------------------------------------------------------- 133 (1142)
Q Consensus 134 -------------------------------------------------------------------------------- 133 (1142)
T Consensus 209 ~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~ 288 (570)
T 2z63_A 209 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFS 288 (570)
T ss_dssp SCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEE
T ss_pred cccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEE
Confidence
Q ss_pred -------------------------------------------------------cCCCCCCEEECCCCCCCCCcccchh
Q 001142 134 -------------------------------------------------------NKLKGLKELELSKVPPRPSVLTLLS 158 (1142)
Q Consensus 134 -------------------------------------------------------~~L~~L~~L~Ls~n~~n~~~~~lp~ 158 (1142)
..+++|++|++++|.+.. ....|.
T Consensus 289 l~~~~l~~l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~ 367 (570)
T 2z63_A 289 LVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSF-KGCCSQ 367 (570)
T ss_dssp EESCEECSCCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBE-EEEEEH
T ss_pred ecCccchhhhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCc-cccccc
Confidence 112233333333322210 011145
Q ss_pred hhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccc--hhhcCCCCCCEEEccCCCCC-ccCccccCCCCC
Q 001142 159 EIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLP--TEICYLKALISLKVANNKLV-ELPSGLYLLQRL 235 (1142)
Q Consensus 159 ~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP--~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~L~~L 235 (1142)
.+.++++|+.|++++|.++.+|..+..+++|+.|+|++|.++.++ ..+..+++|+.|+|++|.++ .+|..+..+++|
T Consensus 368 ~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 447 (570)
T 2z63_A 368 SDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSL 447 (570)
T ss_dssp HHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTC
T ss_pred cccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcC
Confidence 566777888888888887777666777777777777777777543 35667777777777777776 345566667777
Q ss_pred CEEeCcCCcCC-CCCcccccCCCCCCEEEccCCCCCC
Q 001142 236 ENLDLSNNRLT-SLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 236 ~~L~Ls~N~Ls-~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+.|+|++|+++ +.+|..+..+++|+.|+|++|++++
T Consensus 448 ~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~ 484 (570)
T 2z63_A 448 EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 484 (570)
T ss_dssp CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE
T ss_pred cEEECcCCcCccccchhhhhcccCCCEEECCCCcccc
Confidence 77777777776 4555567777777777777777765
No 298
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.93 E-value=1.2e-24 Score=271.23 Aligned_cols=276 Identities=22% Similarity=0.173 Sum_probs=190.6
Q ss_pred CcccccCCCCCCcccCCCCCCCCCC--CCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCc
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDD--DSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLR 94 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~--L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~ 94 (1142)
.++.|.+..|+++.+.+..|.+++. |++|||++|++++..|..|+.+ ++|++|+|++|.++.+ |..|..+++|+
T Consensus 223 ~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 299 (680)
T 1ziw_A 223 SIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWL---PQLEYFFLEYNNIQHLFSHSLHGLFNVR 299 (680)
T ss_dssp CCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTC---TTCCEEECCSCCBSEECTTTTTTCTTCC
T ss_pred cccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCc---ccccEeeCCCCccCccChhhhcCCCCcc
Confidence 5666777777777777777766644 7777777777776666555433 6777777777777654 44566666666
Q ss_pred EEEccCCCCC------cCch----hhcCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCC--------------
Q 001142 95 NLKFFGNEIN------LFPS----EVGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPP-------------- 149 (1142)
Q Consensus 95 ~L~Ls~N~L~------~lP~----~l~~L~~L~~L~Ls~N~l~~~-~~~~~~L~~L~~L~Ls~n~~-------------- 149 (1142)
+|+|++|... .+|. .|..+++|+.|+|++|.+..+ +..|..+++|++|++++|.+
T Consensus 300 ~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~ 379 (680)
T 1ziw_A 300 YLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLA 379 (680)
T ss_dssp EEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGT
T ss_pred EEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccc
Confidence 6666655433 3332 455666666666666664433 33456666666666655431
Q ss_pred -----------CCCcccchhhhcCCCCCcEEEccCCCCC-ccC-cccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEE
Q 001142 150 -----------RPSVLTLLSEIAGLKCLTKLSVCHFSIR-YLP-PEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISL 215 (1142)
Q Consensus 150 -----------n~~~~~lp~~l~~L~~L~~L~Ls~N~L~-~IP-~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L 215 (1142)
|.+....|..|..+++|+.|+|++|.++ .+| ..|..+++|++|+|++|++..+ |..+..+++|+.|
T Consensus 380 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L 459 (680)
T 1ziw_A 380 HSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRL 459 (680)
T ss_dssp TSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEE
T ss_pred cCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccc
Confidence 2233444667888888888888888887 465 4678888888888888888855 5677778888888
Q ss_pred EccCCCCC---ccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCC-------------CCCCchh
Q 001142 216 KVANNKLV---ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSY-------------CQVPSWI 279 (1142)
Q Consensus 216 ~Ls~N~Ls---~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~-------------~~iP~~~ 279 (1142)
+|++|.++ .+|..+..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+++.+ ..++...
T Consensus 460 ~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~ 539 (680)
T 1ziw_A 460 MLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLH 539 (680)
T ss_dssp ECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCC
T ss_pred hhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCC
Confidence 88888875 5688888889999999999999998888888899999999999988752 2334444
Q ss_pred hccCCCCCCCCCCCCcc
Q 001142 280 CCNLEGNGKDSSNDDFI 296 (1142)
Q Consensus 280 ~~~l~~n~l~~~~~~~~ 296 (1142)
.+.++.|.+...+...+
T Consensus 540 ~L~L~~N~l~~i~~~~~ 556 (680)
T 1ziw_A 540 ILNLESNGFDEIPVEVF 556 (680)
T ss_dssp EEECCSSCCCCCCTTTT
T ss_pred EEECCCCCCCCCCHHHc
Confidence 56666776665555433
No 299
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=6.9e-27 Score=264.65 Aligned_cols=245 Identities=21% Similarity=0.178 Sum_probs=198.4
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCC-CCCccccc----CCCCCCCccEEEeecCCCC-ccCccc--cC
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVD-FPLIESYG----NRGGDNSVEGLYLYKNVLN-LIPKSV--GR 89 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~-~~~p~~~~----~l~~L~~L~~L~Ls~N~Lt-~iP~~l--~~ 89 (1142)
.++.+.+..|++ .++. .+... |+.|+|++|+|+ ..+|..+. .+.++++|++|+|++|.|+ .+|..+ ..
T Consensus 44 ~L~~l~l~~n~l-~~p~-~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE-ADLG-QFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT-CCCH-HHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc-ccHH-HHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 467777778888 4443 22222 888899999984 44555443 0013489999999999998 678876 88
Q ss_pred CcCCcEEEccCCCCCcCchhhcCC-----CCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhh--c
Q 001142 90 YEKLRNLKFFGNEINLFPSEVGNL-----LGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEI--A 161 (1142)
Q Consensus 90 L~~L~~L~Ls~N~L~~lP~~l~~L-----~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l--~ 161 (1142)
+++|++|+|++|+|+.+|..++++ ++|++|+|++|.+..++ ..+..+++|++|+|++|.+.... .+|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-~~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGER-GLISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHH-HHHHHSCTT
T ss_pred CCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcch-HHHHHHHhc
Confidence 999999999999999888888777 99999999999977766 78999999999999996643221 134444 8
Q ss_pred CCCCCcEEEccCCCCCccC---cc-cCCCCCCCEEEccCCCCCccc--hhhcCCCCCCEEEccCCCCCccCccccCCCCC
Q 001142 162 GLKCLTKLSVCHFSIRYLP---PE-IGCLSNLEQLDLSFNKMKYLP--TEICYLKALISLKVANNKLVELPSGLYLLQRL 235 (1142)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~IP---~~-l~~L~~L~~L~Ls~N~L~~lP--~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L 235 (1142)
.+++|+.|+|++|+|+.+| .. +..+++|++|+|++|+|+.++ ..+..+++|+.|+|++|+|+.||..+. ++|
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L 276 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP--AKL 276 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC--SEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc--CCc
Confidence 8999999999999999543 33 368899999999999999654 456678999999999999999999888 889
Q ss_pred CEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 236 ENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 236 ~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+.|+|++|+|+++ |. +..+++|+.|+|++|+|++
T Consensus 277 ~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 277 SVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred eEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 9999999999998 43 8999999999999999986
No 300
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.93 E-value=1.1e-24 Score=260.11 Aligned_cols=237 Identities=22% Similarity=0.270 Sum_probs=171.9
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1142)
-+.++.|.+..|+|+.+.+ |.++++|++|+|++|.+++..+ + +++++|++|+|++|.++.+|. +.++++|++
T Consensus 67 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~---~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~ 138 (466)
T 1o6v_A 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--L---ANLTNLTGLTLFNNQITDIDP-LKNLTNLNR 138 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--G---TTCTTCCEEECCSSCCCCCGG-GTTCTTCSE
T ss_pred hcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--h---cCCCCCCEEECCCCCCCCChH-HcCCCCCCE
Confidence 3478888888898888876 8888888888888888887665 4 445888888888888888865 778888888
Q ss_pred EEccCCCCCcCch--------------------hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCccc
Q 001142 96 LKFFGNEINLFPS--------------------EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLT 155 (1142)
Q Consensus 96 L~Ls~N~L~~lP~--------------------~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~ 155 (1142)
|+|++|.++.+|. .+.++++|+.|++++|.+..++ .+..+++|++|++++|.+....
T Consensus 139 L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~-- 215 (466)
T 1o6v_A 139 LELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDIS-VLAKLTNLESLIATNNQISDIT-- 215 (466)
T ss_dssp EEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCG--
T ss_pred EECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCCh-hhccCCCCCEEEecCCcccccc--
Confidence 8888887766542 2556777888888888876664 3777888888888886554332
Q ss_pred chhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCC
Q 001142 156 LLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRL 235 (1142)
Q Consensus 156 lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L 235 (1142)
| +..+++|+.|++++|+++.++ .+..+++|+.|+|++|.++.++. +..+++|+.|+|++|.++.+|. +..+++|
T Consensus 216 -~--~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L 289 (466)
T 1o6v_A 216 -P--LGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP-LAGLTAL 289 (466)
T ss_dssp -G--GGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG-GTTCTTC
T ss_pred -c--ccccCCCCEEECCCCCcccch-hhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc-ccCCCcc
Confidence 1 556677777777777777663 45667777777777777776654 6667777777777777776655 6667777
Q ss_pred CEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 236 ENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 236 ~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+.|+|++|+++++++ +..+++|+.|+|++|++++
T Consensus 290 ~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 290 TNLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp SEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSC
T ss_pred CeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCC
Confidence 777777777776654 5666777777777777665
No 301
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=2.5e-26 Score=260.63 Aligned_cols=238 Identities=17% Similarity=0.139 Sum_probs=195.3
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEc
Q 001142 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKF 98 (1142)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~L 98 (1142)
++.+.+..+++.......+..+++|++|||++|+|++..|..|+.+ ++|++|+|++|.++.+++ |..+++|++|+|
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~L 87 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPF---TKLELLNLSSNVLYETLD-LESLSTLRTLDL 87 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTC---TTCCEEECTTSCCEEEEE-ETTCTTCCEEEC
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCC---CcCCEEECCCCcCCcchh-hhhcCCCCEEEC
Confidence 4445566677776666677788899999999999999888777655 899999999999987765 888999999999
Q ss_pred cCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc
Q 001142 99 FGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1142)
Q Consensus 99 s~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1142)
++|+|+.+|. +++|+.|++++|.+..++. ..+++|++|++++|.+.. ..+..+..+++|+.|+|++|.|+.
T Consensus 88 s~n~l~~l~~----~~~L~~L~l~~n~l~~~~~--~~~~~L~~L~l~~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~ 158 (317)
T 3o53_A 88 NNNYVQELLV----GPSIETLHAANNNISRVSC--SRGQGKKNIYLANNKITM---LRDLDEGCRSRVQYLDLKLNEIDT 158 (317)
T ss_dssp CSSEEEEEEE----CTTCCEEECCSSCCSEEEE--CCCSSCEEEECCSSCCCS---GGGBCTGGGSSEEEEECTTSCCCE
T ss_pred cCCccccccC----CCCcCEEECCCCccCCcCc--cccCCCCEEECCCCCCCC---ccchhhhccCCCCEEECCCCCCCc
Confidence 9999987763 3889999999998776653 457889999999866543 334467788899999999999996
Q ss_pred c-Cccc-CCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCC
Q 001142 179 L-PPEI-GCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1142)
Q Consensus 179 I-P~~l-~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L 256 (1142)
+ |..+ ..+++|++|+|++|+|+.+|... .+++|+.|+|++|+|+.+|..+..+++|+.|+|++|+|+++++ .+..+
T Consensus 159 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~-~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l~~-~~~~l 236 (317)
T 3o53_A 159 VNFAELAASSDTLEHLNLQYNFIYDVKGQV-VFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEK-ALRFS 236 (317)
T ss_dssp EEGGGGGGGTTTCCEEECTTSCCCEEECCC-CCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECT-TCCCC
T ss_pred ccHHHHhhccCcCCEEECCCCcCccccccc-ccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccchhh-HhhcC
Confidence 5 4455 47899999999999999886543 4889999999999999998888889999999999999998654 68889
Q ss_pred CCCCEEEccCCCCCC
Q 001142 257 HNLQNLNLQYNKLLS 271 (1142)
Q Consensus 257 ~~L~~L~Ls~N~L~~ 271 (1142)
++|+.|+|++|+++|
T Consensus 237 ~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 237 QNLEHFDLRGNGFHC 251 (317)
T ss_dssp TTCCEEECTTCCCBH
T ss_pred CCCCEEEccCCCccC
Confidence 999999999999984
No 302
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=2.7e-24 Score=256.78 Aligned_cols=184 Identities=19% Similarity=0.112 Sum_probs=127.3
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1142)
+.++.|.+..|+|+.++ |..+++|++|+|++|+|++. + ++++++|++|+|++|.|+.+| +..+++|++|
T Consensus 64 ~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~~-~-----~~~l~~L~~L~L~~N~l~~l~--~~~l~~L~~L 132 (457)
T 3bz5_A 64 TGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTNL-D-----VTPLTKLTYLNCDTNKLTKLD--VSQNPLLTYL 132 (457)
T ss_dssp TTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCC-C-----CTTCTTCCEEECCSSCCSCCC--CTTCTTCCEE
T ss_pred CCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCcee-e-----cCCCCcCCEEECCCCcCCeec--CCCCCcCCEE
Confidence 47888999999999874 88899999999999999885 2 345689999999999999886 8888899999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001142 97 KFFGNEINLFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1142)
+|++|+|+.+| ++++++|+.|++++|. ++.+ .+..+++|++|++++|.+.. +| +..+++|+.|++++|+
T Consensus 133 ~l~~N~l~~l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~----l~--l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 133 NCARNTLTEID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE----LD--VSQNKLLNRLNCDTNN 202 (457)
T ss_dssp ECTTSCCSCCC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC----CC--CTTCTTCCEEECCSSC
T ss_pred ECCCCccceec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce----ec--cccCCCCCEEECcCCc
Confidence 99999998775 6777777777777774 4444 35666777777777655433 22 4455555555555555
Q ss_pred CCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCcc
Q 001142 176 IRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL 225 (1142)
Q Consensus 176 L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~I 225 (1142)
|+.++ ++.+++|+.|+|++|+|+.+| ++.+++|+.|+|++|+|+.+
T Consensus 203 l~~~~--l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 203 ITKLD--LNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSCCC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCC
T ss_pred CCeec--cccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCc
Confidence 55442 455555555555555555554 44555555555555555433
No 303
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.93 E-value=4.2e-25 Score=248.44 Aligned_cols=219 Identities=21% Similarity=0.265 Sum_probs=195.7
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcEEEccCCCCCcC---chhhcCCCCCCE
Q 001142 43 DSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNLKFFGNEINLF---PSEVGNLLGLEC 118 (1142)
Q Consensus 43 L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~L~Ls~N~L~~l---P~~l~~L~~L~~ 118 (1142)
-+.+++++++++..+...+ ++|++|+|++|.|+.+|.. |.++++|++|+|++|.|+.+ |..+..+++|++
T Consensus 9 ~~~l~c~~~~l~~ip~~~~------~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 9 GTEIRCNSKGLTSVPTGIP------SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTEEECCSSCCSSCCSCCC------TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCEEEcCCCCcccCCCCCC------CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 3589999999987654322 6899999999999999875 78999999999999999865 678889999999
Q ss_pred EEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccch--hhhcCCCCCcEEEccCCCCCcc-CcccCCCCCCCEEEcc
Q 001142 119 LQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLL--SEIAGLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLS 195 (1142)
Q Consensus 119 L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp--~~l~~L~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls 195 (1142)
|+|++|.+..++..+..+++|++|++++|.+. .++ ..+..+++|+.|++++|.++.+ |..+..+++|++|+|+
T Consensus 83 L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~----~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 158 (306)
T 2z66_A 83 LDLSFNGVITMSSNFLGLEQLEHLDFQHSNLK----QMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMA 158 (306)
T ss_dssp EECCSCSEEEEEEEEETCTTCCEEECTTSEEE----SSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECT
T ss_pred EECCCCccccChhhcCCCCCCCEEECCCCccc----ccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECC
Confidence 99999998888888999999999999995543 333 4688999999999999999954 6678999999999999
Q ss_pred CCCCCc--cchhhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 196 FNKMKY--LPTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 196 ~N~L~~--lP~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|.++. +|..+..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+++++..+..+++|+.|+|++|++++
T Consensus 159 ~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 237 (306)
T 2z66_A 159 GNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT 237 (306)
T ss_dssp TCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCB
T ss_pred CCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcc
Confidence 999985 799999999999999999999976 7788899999999999999999999889999999999999999988
No 304
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=2.7e-26 Score=276.23 Aligned_cols=219 Identities=18% Similarity=0.165 Sum_probs=172.6
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCC
Q 001142 38 NDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLE 117 (1142)
Q Consensus 38 ~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~ 117 (1142)
...++|++|||++|+|++.+|..|+.+ ++|++|+|++|.|+.+++ |..+++|++|+|++|.|+.+|.. ++|+
T Consensus 31 ~~~~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~~----~~L~ 102 (487)
T 3oja_A 31 QSAWNVKELDLSGNPLSQISAADLAPF---TKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLVG----PSIE 102 (487)
T ss_dssp TTGGGCCEEECCSSCCCCCCGGGGTTC---TTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEEC----TTCC
T ss_pred ccCCCccEEEeeCCcCCCCCHHHHhCC---CCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCCC----CCcC
Confidence 345588888888888888877766544 888888888888886654 88888888888888888877643 7888
Q ss_pred EEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc-cCcccC-CCCCCCEEEcc
Q 001142 118 CLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY-LPPEIG-CLSNLEQLDLS 195 (1142)
Q Consensus 118 ~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~-IP~~l~-~L~~L~~L~Ls 195 (1142)
.|+|++|.+..++. ..+++|+.|+|++|.+. +..|..++.+++|+.|+|++|.|+. +|..+. .+++|+.|+|+
T Consensus 103 ~L~L~~N~l~~~~~--~~l~~L~~L~L~~N~l~---~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls 177 (487)
T 3oja_A 103 TLHAANNNISRVSC--SRGQGKKNIYLANNKIT---MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (487)
T ss_dssp EEECCSSCCCCEEE--CCCSSCEEEECCSSCCC---SGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred EEECcCCcCCCCCc--cccCCCCEEECCCCCCC---CCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecC
Confidence 88888888776653 35678888888885543 3445567778888888888888885 466664 78888888888
Q ss_pred CCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 196 FNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 196 ~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|.|+.+|.. ..+++|+.|+|++|.|+.+|+.+..+++|+.|+|++|.|+++++ .+..+++|+.|+|++|++.|
T Consensus 178 ~N~l~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~-~l~~l~~L~~L~l~~N~l~c 251 (487)
T 3oja_A 178 YNFIYDVKGQ-VVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEK-ALRFSQNLEHFDLRGNGFHC 251 (487)
T ss_dssp TSCCCEEECC-CCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECT-TCCCCTTCCEEECTTCCBCH
T ss_pred CCcccccccc-ccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccch-hhccCCCCCEEEcCCCCCcC
Confidence 8888877543 35888888888888888888888888888888888888888655 68888888888888888874
No 305
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.93 E-value=1.5e-24 Score=258.91 Aligned_cols=254 Identities=23% Similarity=0.281 Sum_probs=214.8
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1142)
.+..|.+..+.++.++ .+..+++|++|||++|.+++..+ + +++++|++|+|++|.++.+|. +.++++|++|+
T Consensus 47 ~l~~L~l~~~~i~~l~--~~~~l~~L~~L~Ls~n~l~~~~~--~---~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~ 118 (466)
T 1o6v_A 47 QVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQLTDITP--L---KNLTKLVDILMNNNQIADITP-LANLTNLTGLT 118 (466)
T ss_dssp TCCEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--G---TTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEE
T ss_pred cccEEecCCCCCccCc--chhhhcCCCEEECCCCccCCchh--h---hccccCCEEECCCCccccChh-hcCCCCCCEEE
Confidence 5778889999999876 48889999999999999998765 4 455999999999999999877 99999999999
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc--------------------cccCCCCCCEEECCCCCCCCCcccch
Q 001142 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF--------------------ALNKLKGLKELELSKVPPRPSVLTLL 157 (1142)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~--------------------~~~~L~~L~~L~Ls~n~~n~~~~~lp 157 (1142)
|++|.|+.+|. +.++++|+.|+|++|.+..++. .+..+++|+.|++++|.+...
T Consensus 119 L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~----- 192 (466)
T 1o6v_A 119 LFNNQITDIDP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI----- 192 (466)
T ss_dssp CCSSCCCCCGG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC-----
T ss_pred CCCCCCCCChH-HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC-----
Confidence 99999999876 8999999999999998665542 256778899999998766443
Q ss_pred hhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCE
Q 001142 158 SEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLEN 237 (1142)
Q Consensus 158 ~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~ 237 (1142)
..+..+++|+.|++++|.++.++. ++.+++|+.|+|++|+++.++ .+..+++|+.|+|++|.++.++. +..+++|+.
T Consensus 193 ~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~ 269 (466)
T 1o6v_A 193 SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNLAP-LSGLTKLTE 269 (466)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSE
T ss_pred hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccch-hhhcCCCCCEEECCCCccccchh-hhcCCCCCE
Confidence 247889999999999999997765 788999999999999999885 68899999999999999998876 888999999
Q ss_pred EeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCC---CCCchhhccCCCCCCCC
Q 001142 238 LDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYC---QVPSWICCNLEGNGKDS 290 (1142)
Q Consensus 238 L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~---~iP~~~~~~l~~n~l~~ 290 (1142)
|+|++|+++++++ +..+++|+.|+|++|++++.. .+|....+.++.|.+..
T Consensus 270 L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 270 LKLGANQISNISP--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSC
T ss_pred EECCCCccCcccc--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCC
Confidence 9999999999876 889999999999999998732 13333335555555443
No 306
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=4.5e-25 Score=244.66 Aligned_cols=208 Identities=26% Similarity=0.260 Sum_probs=143.4
Q ss_pred CccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECC
Q 001142 69 SVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELS 145 (1142)
Q Consensus 69 ~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls 145 (1142)
+|++|+|++|.|+.+|. .|.++++|++|+|++|+|+.++. .|.++++|++|+|++|.+..++ ..+..+++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 34444444444444432 34444444444444444444332 3444444444444444433322 334455555555555
Q ss_pred CCCCCCCcccchhhhcCCCCCcEEEccCCCCCc--cCcccCCCCCCCEEEccCCCCCccc-hhhcCCCCCC----EEEcc
Q 001142 146 KVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY--LPPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALI----SLKVA 218 (1142)
Q Consensus 146 ~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~--IP~~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~----~L~Ls 218 (1142)
+|.+... .+..+.++++|+.|++++|.++. +|..+..+++|+.|+|++|+|+.+| ..+..+++|+ .|+|+
T Consensus 109 ~n~l~~~---~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls 185 (276)
T 2z62_A 109 ETNLASL---ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (276)
T ss_dssp TSCCCCS---TTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECC
T ss_pred CCCcccc---CchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecC
Confidence 5333221 12246778889999999999986 6889999999999999999999775 5666666666 89999
Q ss_pred CCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchh
Q 001142 219 NNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWI 279 (1142)
Q Consensus 219 ~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~ 279 (1142)
+|.|+.+|.......+|+.|+|++|+|+++++..|..+++|+.|+|++|+|+|.|+.-.++
T Consensus 186 ~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~~l 246 (276)
T 2z62_A 186 LNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYL 246 (276)
T ss_dssp SSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTHHH
T ss_pred CCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchHHH
Confidence 9999999888888779999999999999999988899999999999999999977533333
No 307
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.1e-26 Score=263.55 Aligned_cols=241 Identities=17% Similarity=0.126 Sum_probs=211.5
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1142)
.+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++.++ + .++++|++|+|++|.|+.+|. +++|++
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~---~~l~~L~~L~Ls~n~l~~l~~----~~~L~~ 103 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--L---ESLSTLRTLDLNNNYVQELLV----GPSIET 103 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--E---TTCTTCCEEECCSSEEEEEEE----CTTCCE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--h---hhcCCCCEEECcCCccccccC----CCCcCE
Confidence 4579999999999999998999999999999999999987665 4 455999999999999998863 379999
Q ss_pred EEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhh-cCCCCCcEEEccC
Q 001142 96 LKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEI-AGLKCLTKLSVCH 173 (1142)
Q Consensus 96 L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l-~~L~~L~~L~Ls~ 173 (1142)
|+|++|+|+.++.. .+++|+.|+|++|.+..++ ..+..+++|++|+|++|.+. ...|..+ ..+++|+.|+|++
T Consensus 104 L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---~~~~~~~~~~l~~L~~L~L~~ 178 (317)
T 3o53_A 104 LHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID---TVNFAELAASSDTLEHLNLQY 178 (317)
T ss_dssp EECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCC---EEEGGGGGGGTTTCCEEECTT
T ss_pred EECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCC---cccHHHHhhccCcCCEEECCC
Confidence 99999999987654 4789999999999987765 47889999999999996554 3345555 4789999999999
Q ss_pred CCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCC-CCCccc
Q 001142 174 FSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLT-SLGSLD 252 (1142)
Q Consensus 174 N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls-~~~p~~ 252 (1142)
|.|+.+|.. ..+++|++|+|++|+|+.+|..+..+++|+.|+|++|+|+.||..+..+++|+.|+|++|.++ +.++.+
T Consensus 179 N~l~~~~~~-~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 257 (317)
T 3o53_A 179 NFIYDVKGQ-VVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (317)
T ss_dssp SCCCEEECC-CCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHHHHHH
T ss_pred CcCcccccc-cccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCcCHHHH
Confidence 999988654 459999999999999999998899999999999999999999999999999999999999999 778888
Q ss_pred ccCCCCCCEEEccCC-CCCC
Q 001142 253 LCLMHNLQNLNLQYN-KLLS 271 (1142)
Q Consensus 253 l~~L~~L~~L~Ls~N-~L~~ 271 (1142)
+..+++|+.|++++| .+++
T Consensus 258 ~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 258 FSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp HHTCHHHHHHHHHHHHHHHS
T ss_pred HhccccceEEECCCchhccC
Confidence 999999999999954 4544
No 308
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.92 E-value=8.1e-26 Score=259.83 Aligned_cols=228 Identities=18% Similarity=0.162 Sum_probs=202.2
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRN 95 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~ 95 (1142)
+.++.|.+..|+|+.+....|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.+|.. |.++++|++
T Consensus 52 ~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 128 (353)
T 2z80_A 52 EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL---GSLEHLDLSYNYLSNLSSSWFKPLSSLTF 128 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC---TTCCEEECCSSCCSSCCHHHHTTCTTCSE
T ss_pred ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCC---CCCCEEECCCCcCCcCCHhHhCCCccCCE
Confidence 479999999999999999999999999999999999999888766544 9999999999999999876 899999999
Q ss_pred EEccCCCCCcCch--hhcCCCCCCEEEccCCC-CCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEc
Q 001142 96 LKFFGNEINLFPS--EVGNLLGLECLQIKISS-PGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1142)
Q Consensus 96 L~Ls~N~L~~lP~--~l~~L~~L~~L~Ls~N~-l~~~-~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~L 171 (1142)
|+|++|+|+.+|. .+.++++|+.|++++|. +..+ +..+..+++|++|++++|.+ ....|..+..+++|+.|++
T Consensus 129 L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l---~~~~~~~l~~l~~L~~L~l 205 (353)
T 2z80_A 129 LNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDL---QSYEPKSLKSIQNVSHLIL 205 (353)
T ss_dssp EECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC---CEECTTTTTTCSEEEEEEE
T ss_pred EECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCc---CccCHHHHhccccCCeecC
Confidence 9999999999987 68899999999999995 6555 46789999999999999554 4456788999999999999
Q ss_pred cCCCCCccCccc-CCCCCCCEEEccCCCCCc--------------------------------cchhhcCCCCCCEEEcc
Q 001142 172 CHFSIRYLPPEI-GCLSNLEQLDLSFNKMKY--------------------------------LPTEICYLKALISLKVA 218 (1142)
Q Consensus 172 s~N~L~~IP~~l-~~L~~L~~L~Ls~N~L~~--------------------------------lP~~l~~L~~L~~L~Ls 218 (1142)
++|.++.+|..+ ..+++|+.|+|++|+|+. +|..+..+++|+.|+|+
T Consensus 206 ~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls 285 (353)
T 2z80_A 206 HMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFS 285 (353)
T ss_dssp ECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECC
T ss_pred CCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECC
Confidence 999999887754 568899999999999875 45567889999999999
Q ss_pred CCCCCccCccc-cCCCCCCEEeCcCCcCCCCCc
Q 001142 219 NNKLVELPSGL-YLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 219 ~N~Ls~IP~~l-~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
+|+|+.||..+ ..+++|+.|+|++|.+++..|
T Consensus 286 ~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 286 RNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 99999999886 689999999999999998765
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.92 E-value=4.7e-25 Score=245.69 Aligned_cols=249 Identities=20% Similarity=0.193 Sum_probs=206.9
Q ss_pred ccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEEEc
Q 001142 20 EKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNLKF 98 (1142)
Q Consensus 20 ~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L~L 98 (1142)
..+....+.|+.++... .++|++|+|++|+|++..+..|+.+ ++|++|+|++|.|+.+ |..|..+++|++|+|
T Consensus 14 ~~~~c~~~~l~~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 87 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVGI---PAASQRIFLHGNRISHVPAASFRAC---RNLTILWLHSNVLARIDAAAFTGLALLEQLDL 87 (285)
T ss_dssp CEEECCSSCCSSCCTTC---CTTCSEEECTTSCCCEECTTTTTTC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred eEEEcCcCCcccCCcCC---CCCceEEEeeCCcCCccCHHHcccC---CCCCEEECCCCccceeCHhhcCCccCCCEEeC
Confidence 45778888898886533 4689999999999999887766554 9999999999999988 678999999999999
Q ss_pred cCCC-CCcC-chhhcCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001142 99 FGNE-INLF-PSEVGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1142)
Q Consensus 99 s~N~-L~~l-P~~l~~L~~L~~L~Ls~N~l~~~-~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1142)
++|. ++.+ |..|.++++|++|+|++|.+..+ +..+..+++|++|++++|.+.. ..+..|..+++|+.|+|++|+
T Consensus 88 ~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~---~~~~~~~~l~~L~~L~l~~n~ 164 (285)
T 1ozn_A 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQA---LPDDTFRDLGNLTHLFLHGNR 164 (285)
T ss_dssp CSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCC---CCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccc---cCHhHhccCCCccEEECCCCc
Confidence 9997 8877 66789999999999999997765 5678999999999999966542 334458899999999999999
Q ss_pred CCccCc-ccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeCcCCcCCCCCccc
Q 001142 176 IRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLD 252 (1142)
Q Consensus 176 L~~IP~-~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~~p~~ 252 (1142)
|+.+|. .|..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++|.++...+..
T Consensus 165 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~ 244 (285)
T 1ozn_A 165 ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH
T ss_pred ccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH
Confidence 998877 589999999999999999966 8899999999999999999998875 4888999999999999998755421
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCCchhh
Q 001142 253 LCLMHNLQNLNLQYNKLLSYCQVPSWIC 280 (1142)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1142)
.-+..|+.+..+.|.+.| ..|..+.
T Consensus 245 -~~~~~l~~~~~~~~~~~c--~~p~~l~ 269 (285)
T 1ozn_A 245 -PLWAWLQKFRGSSSEVPC--SLPQRLA 269 (285)
T ss_dssp -HHHHHHHHCCSEECCCBE--EESGGGT
T ss_pred -HHHHHHHhcccccCcccc--CCchHhC
Confidence 112234555677788776 5665543
No 310
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.92 E-value=3.3e-24 Score=254.15 Aligned_cols=220 Identities=21% Similarity=0.215 Sum_probs=195.2
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEEccCCCCCcCc-hhhcCCCCCCEE
Q 001142 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLKFFGNEINLFP-SEVGNLLGLECL 119 (1142)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L 119 (1142)
....+++++++|+.++.... ++++.|+|++|.|+.++ ..|.++++|++|+|++|+|+.++ ..|.++++|+.|
T Consensus 44 ~~~~v~c~~~~l~~iP~~~~------~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L 117 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDGIS------TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 117 (440)
T ss_dssp TSCEEECCSCCCSSCCSCCC------TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEE
T ss_pred CCCEEEeCCCCcCcCCCCCC------CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEE
Confidence 46789999999997654322 68999999999999885 67999999999999999999775 568999999999
Q ss_pred EccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC-CCCCccCc-ccCCCCCCCEEEccC
Q 001142 120 QIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH-FSIRYLPP-EIGCLSNLEQLDLSF 196 (1142)
Q Consensus 120 ~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~-N~L~~IP~-~l~~L~~L~~L~Ls~ 196 (1142)
+|++|.+..++. .|..+++|++|+|++|.+. ...+..|.++++|+.|+|++ |.++.+|. .|..+++|++|+|++
T Consensus 118 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~---~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~ 194 (440)
T 3zyj_A 118 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE---SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAM 194 (440)
T ss_dssp ECCSSCCSSCCTTTSCSCSSCCEEECCSCCCC---EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTT
T ss_pred ECCCCcCCeeCHhHhhccccCceeeCCCCccc---ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCC
Confidence 999999887775 6999999999999996653 33345788999999999999 56777766 689999999999999
Q ss_pred CCCCccchhhcCCCCCCEEEccCCCCCcc-CccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 197 NKMKYLPTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 197 N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
|+|+.+|. +..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|+.
T Consensus 195 n~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 269 (440)
T 3zyj_A 195 CNLREIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL 269 (440)
T ss_dssp SCCSSCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC
T ss_pred CcCccccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc
Confidence 99999984 88999999999999999966 7788899999999999999999999999999999999999999997
No 311
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=1.9e-25 Score=268.85 Aligned_cols=240 Identities=17% Similarity=0.121 Sum_probs=206.3
Q ss_pred ccCCCCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCC
Q 001142 11 QKSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRY 90 (1142)
Q Consensus 11 ~~~~~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L 90 (1142)
...+..+.+..|.+..|+|+.+.+..|.++++|++|+|++|.|++.+| ++.+++|++|+|++|.|+.+|..
T Consensus 28 ~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-----l~~l~~L~~L~Ls~N~l~~l~~~---- 98 (487)
T 3oja_A 28 SLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-----LESLSTLRTLDLNNNYVQELLVG---- 98 (487)
T ss_dssp TTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-----CTTCTTCCEEECCSSEEEEEEEC----
T ss_pred HhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-----cccCCCCCEEEecCCcCCCCCCC----
Confidence 334455589999999999999999999999999999999999988665 45569999999999999988743
Q ss_pred cCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhc-CCCCCcE
Q 001142 91 EKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIA-GLKCLTK 168 (1142)
Q Consensus 91 ~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~-~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~-~L~~L~~ 168 (1142)
++|++|+|++|.|+.+|.. .+++|+.|+|++|.+... |..+..+++|++|+|++|.+ .+..|..+. .+++|+.
T Consensus 99 ~~L~~L~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l---~~~~~~~l~~~l~~L~~ 173 (487)
T 3oja_A 99 PSIETLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEI---DTVNFAELAASSDTLEH 173 (487)
T ss_dssp TTCCEEECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCC---CEEEGGGGGGGTTTCCE
T ss_pred CCcCEEECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCC---CCcChHHHhhhCCcccE
Confidence 7899999999999987653 468999999999997765 56788999999999999554 444566765 7899999
Q ss_pred EEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCC-C
Q 001142 169 LSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLT-S 247 (1142)
Q Consensus 169 L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls-~ 247 (1142)
|+|++|.|+.+|.. ..+++|+.|+|++|+|+.+|..+..+++|+.|+|++|.|+.||..+..+++|+.|+|++|.++ +
T Consensus 174 L~Ls~N~l~~~~~~-~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 174 LNLQYNFIYDVKGQ-VVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp EECTTSCCCEEECC-CCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred EecCCCcccccccc-ccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 99999999988653 468999999999999999988899999999999999999999999999999999999999998 6
Q ss_pred CCcccccCCCCCCEEEcc
Q 001142 248 LGSLDLCLMHNLQNLNLQ 265 (1142)
Q Consensus 248 ~~p~~l~~L~~L~~L~Ls 265 (1142)
.+|.++..++.|+.|+++
T Consensus 253 ~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 253 TLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHHHHHTTCHHHHHHHHH
T ss_pred chHHHHHhCCCCcEEecc
Confidence 667788888888888887
No 312
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.92 E-value=1.9e-24 Score=257.14 Aligned_cols=224 Identities=21% Similarity=0.236 Sum_probs=199.2
Q ss_pred CCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCc
Q 001142 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLR 94 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~ 94 (1142)
++.+..|.+..|+|+.+.+..|.++++|++|+|++|+|++..+..|.. +++|++|+|++|.|+.+|. .|..+++|+
T Consensus 74 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 150 (452)
T 3zyi_A 74 PSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNG---LASLNTLELFDNWLTVIPSGAFEYLSKLR 150 (452)
T ss_dssp CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTT---CTTCCEEECCSSCCSBCCTTTSSSCTTCC
T ss_pred CCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccC---cccCCEEECCCCcCCccChhhhcccCCCC
Confidence 357999999999999999999999999999999999999988876654 5999999999999999976 488999999
Q ss_pred EEEccCCCCCcCch-hhcCCCCCCEEEccCCC-CCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEc
Q 001142 95 NLKFFGNEINLFPS-EVGNLLGLECLQIKISS-PGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1142)
Q Consensus 95 ~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~-l~~~~~-~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~L 171 (1142)
+|+|++|+|+.+|. .|.++++|+.|+|++|+ ++.++. .|..+++|++|+|++|.+.. +| .+..+++|+.|+|
T Consensus 151 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~----~~-~~~~l~~L~~L~L 225 (452)
T 3zyi_A 151 ELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD----MP-NLTPLVGLEELEM 225 (452)
T ss_dssp EEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS----CC-CCTTCTTCCEEEC
T ss_pred EEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc----cc-cccccccccEEEC
Confidence 99999999998876 58899999999999854 666664 68999999999999977653 33 5788999999999
Q ss_pred cCCCCCcc-CcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeCcCCcCCC
Q 001142 172 CHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTS 247 (1142)
Q Consensus 172 s~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~L~Ls~N~Ls~ 247 (1142)
++|.|+.+ |..|..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|.+..
T Consensus 226 s~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 226 SGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp TTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred cCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 99999976 66899999999999999999966 67899999999999999999988765 5669999999999998764
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=1.5e-25 Score=253.65 Aligned_cols=226 Identities=19% Similarity=0.103 Sum_probs=190.4
Q ss_pred cccccCCCCCCcccCCCC-CC-------CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCC
Q 001142 19 KEKLPSEANKINNEKNGS-VN-------DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRY 90 (1142)
Q Consensus 19 l~~L~~~~N~i~~l~~~~-f~-------~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L 90 (1142)
++.|.+..|+|+.+.... +. ++++|++|+|++|+|++.+|..+. ++.+++|++|+|++|.|+.+|..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL-EATGPDLNILNLRNVSWATRDAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS-SCCSCCCSEEEEESCBCSSSSSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH-HhcCCCccEEEccCCCCcchhHHHHHH
Confidence 778899999997654433 22 689999999999999998887541 245699999999999999888888877
Q ss_pred -----cCCcEEEccCCCCCcCc-hhhcCCCCCCEEEccCCCCCC---Cccc--ccCCCCCCEEECCCCCCCCCcccchhh
Q 001142 91 -----EKLRNLKFFGNEINLFP-SEVGNLLGLECLQIKISSPGV---NGFA--LNKLKGLKELELSKVPPRPSVLTLLSE 159 (1142)
Q Consensus 91 -----~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~l~~---~~~~--~~~L~~L~~L~Ls~n~~n~~~~~lp~~ 159 (1142)
++|++|+|++|+|+.+| ..|+++++|+.|+|++|.+.. .+.. +..+++|++|+|++|.+..........
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 223 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHH
Confidence 89999999999999776 779999999999999998543 1223 389999999999998775332222234
Q ss_pred hcCCCCCcEEEccCCCCCccC--cccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCE
Q 001142 160 IAGLKCLTKLSVCHFSIRYLP--PEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLEN 237 (1142)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~IP--~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~ 237 (1142)
+.++++|+.|+|++|+|+.++ ..+..+++|++|+|++|+|+.+|..+. ++|+.|+|++|+|+.+|. +..+++|+.
T Consensus 224 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L~~L~Ls~N~l~~~p~-~~~l~~L~~ 300 (312)
T 1wwl_A 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP--AKLSVLDLSYNRLDRNPS-PDELPQVGN 300 (312)
T ss_dssp HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC--SEEEEEECCSSCCCSCCC-TTTSCEEEE
T ss_pred HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc--CCceEEECCCCCCCCChh-HhhCCCCCE
Confidence 568899999999999999654 456778999999999999999999887 899999999999999987 889999999
Q ss_pred EeCcCCcCCCC
Q 001142 238 LDLSNNRLTSL 248 (1142)
Q Consensus 238 L~Ls~N~Ls~~ 248 (1142)
|+|++|+|++.
T Consensus 301 L~L~~N~l~~~ 311 (312)
T 1wwl_A 301 LSLKGNPFLDS 311 (312)
T ss_dssp EECTTCTTTCC
T ss_pred EeccCCCCCCC
Confidence 99999999864
No 314
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.92 E-value=5.9e-24 Score=253.60 Aligned_cols=234 Identities=26% Similarity=0.258 Sum_probs=153.4
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1142)
+.++.|.+..|+|+.++ .|.++++|++|+|++|++++ +|..+ .+|++|+|++|.++.+| .+.++++|++|
T Consensus 131 ~~L~~L~L~~n~l~~lp--~~~~l~~L~~L~l~~N~l~~-lp~~~------~~L~~L~L~~n~l~~l~-~~~~l~~L~~L 200 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEKLP--ELQNSSFLKIIDVDNNSLKK-LPDLP------PSLEFIAAGNNQLEELP-ELQNLPFLTAI 200 (454)
T ss_dssp TTCCEEECCSSCCSSCC--CCTTCTTCCEEECCSSCCSC-CCCCC------TTCCEEECCSSCCSSCC-CCTTCTTCCEE
T ss_pred CCCCEEECcCCCCCCCc--ccCCCCCCCEEECCCCcCcc-cCCCc------ccccEEECcCCcCCcCc-cccCCCCCCEE
Confidence 35666666666666654 46677777777777777665 33322 35666666666666666 46666666666
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCC
Q 001142 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1142)
+|++|+|+.+|... ++|+.|++++|.+..+| .+..+++|++|++++|.+.. +|.. +++|+.|++++|++
T Consensus 201 ~l~~N~l~~l~~~~---~~L~~L~l~~n~l~~lp-~~~~l~~L~~L~l~~N~l~~----l~~~---~~~L~~L~l~~N~l 269 (454)
T 1jl5_A 201 YADNNSLKKLPDLP---LSLESIVAGNNILEELP-ELQNLPFLTTIYADNNLLKT----LPDL---PPSLEALNVRDNYL 269 (454)
T ss_dssp ECCSSCCSSCCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS----CCSC---CTTCCEEECCSSCC
T ss_pred ECCCCcCCcCCCCc---CcccEEECcCCcCCccc-ccCCCCCCCEEECCCCcCCc----cccc---ccccCEEECCCCcc
Confidence 66666666665432 46666666666666555 36667777777777755432 2221 24556666666666
Q ss_pred CccCcccCCCCCCCEEEccCCCCCccc---hhhc-------------CC-CCCCEEEccCCCCCccCccccCCCCCCEEe
Q 001142 177 RYLPPEIGCLSNLEQLDLSFNKMKYLP---TEIC-------------YL-KALISLKVANNKLVELPSGLYLLQRLENLD 239 (1142)
Q Consensus 177 ~~IP~~l~~L~~L~~L~Ls~N~L~~lP---~~l~-------------~L-~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~ 239 (1142)
+.+|.. +++|+.|+|++|+|+.+| ..+. .+ ++|+.|+|++|+|+.+|.. +++|+.|+
T Consensus 270 ~~l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~lp~~---~~~L~~L~ 343 (454)
T 1jl5_A 270 TDLPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL---PPRLERLI 343 (454)
T ss_dssp SCCCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSCCCCC---CTTCCEEE
T ss_pred cccCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccccccc---CCcCCEEE
Confidence 655543 245666666666665432 2211 22 5888999999999888865 47899999
Q ss_pred CcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhc
Q 001142 240 LSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICC 281 (1142)
Q Consensus 240 Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~ 281 (1142)
|++|+|+++++ .+++|+.|+|++|+++++..+|.++..
T Consensus 344 L~~N~l~~lp~----~l~~L~~L~L~~N~l~~l~~ip~~l~~ 381 (454)
T 1jl5_A 344 ASFNHLAEVPE----LPQNLKQLHVEYNPLREFPDIPESVED 381 (454)
T ss_dssp CCSSCCSCCCC----CCTTCCEEECCSSCCSSCCCCCTTCCE
T ss_pred CCCCccccccc----hhhhccEEECCCCCCCcCCCChHHHHh
Confidence 99999998665 478999999999999987667776653
No 315
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.91 E-value=1.1e-23 Score=233.16 Aligned_cols=201 Identities=26% Similarity=0.362 Sum_probs=156.0
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcCchh-hcCCCCCCEE
Q 001142 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPSE-VGNLLGLECL 119 (1142)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L 119 (1142)
+++++|+++|+|+.++ ..+. ++|+.|+|++|.|+.+|. .|.++++|++|+|++|.|+.+|.. |.++++|++|
T Consensus 17 ~~~~l~~~~~~l~~ip-~~~~-----~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L 90 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIP-SNIP-----ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETL 90 (270)
T ss_dssp TTTEEECTTSCCSSCC-SCCC-----TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEE
T ss_pred CCCEEEccCCCCCccC-CCCC-----CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEE
Confidence 4567777777777533 2221 456777777777776654 566777777777777777766654 3556666666
Q ss_pred EccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCC
Q 001142 120 QIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNK 198 (1142)
Q Consensus 120 ~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~ 198 (1142)
+|++|.+..++ +..|.++++|+.|+|++|+++.+|. .|..+++|++|+|++|+
T Consensus 91 ~l~~n~l~~~~--------------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 91 WVTDNKLQALP--------------------------IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp ECCSSCCCCCC--------------------------TTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCcCC--------------------------HhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCc
Confidence 66655543322 2345678889999999999997765 57899999999999999
Q ss_pred CCccchh-hcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCC
Q 001142 199 MKYLPTE-ICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1142)
Q Consensus 199 L~~lP~~-l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1142)
|+.+|.. |..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|.
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 9988754 78899999999999999988764 6789999999999999999999889999999999999999999886
No 316
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=1.9e-23 Score=258.02 Aligned_cols=214 Identities=26% Similarity=0.227 Sum_probs=99.9
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1142)
.+..|.+..|+|+.++. .+++|++|||++|+|+++++ .+++|++|+|++|.|+.+|. .+++|+.|+
T Consensus 62 ~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~-------~l~~L~~L~Ls~N~l~~l~~---~l~~L~~L~ 127 (622)
T 3g06_A 62 HITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPV-------LPPGLLELSIFSNPLTHLPA---LPSGLCKLW 127 (622)
T ss_dssp TCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSCCCC-------CCTTCCEEEECSCCCCCCCC---CCTTCCEEE
T ss_pred CCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCcCCC-------CCCCCCEEECcCCcCCCCCC---CCCCcCEEE
Confidence 44444444444444433 23444555555554443221 12444555555554444444 233444555
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCC
Q 001142 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1142)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1142)
|++|+|+.+|.. +++|+.|+|++|.+..+|. .+.+|+.|++++|.+.. +| ..+++|+.|++++|.|+
T Consensus 128 L~~N~l~~lp~~---l~~L~~L~Ls~N~l~~l~~---~~~~L~~L~L~~N~l~~----l~---~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 128 IFGNQLTSLPVL---PPGLQELSVSDNQLASLPA---LPSELCKLWAYNNQLTS----LP---MLPSGLQELSVSDNQLA 194 (622)
T ss_dssp CCSSCCSCCCCC---CTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC----CC---CCCTTCCEEECCSSCCS
T ss_pred CCCCCCCcCCCC---CCCCCEEECcCCcCCCcCC---ccCCCCEEECCCCCCCC----Cc---ccCCCCcEEECCCCCCC
Confidence 555555444432 2444555555554444332 12334444444433221 22 22345555555555555
Q ss_pred ccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCC
Q 001142 178 YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMH 257 (1142)
Q Consensus 178 ~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~ 257 (1142)
.+|.. +++|+.|+|++|.|+.+|.. +++|+.|+|++|+|+.|| ..+++|+.|+|++|+|+++++ .++
T Consensus 195 ~l~~~---~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~~lp~----~~~ 261 (622)
T 3g06_A 195 SLPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLTSLPM----LPS 261 (622)
T ss_dssp CCCCC---CTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC----CCT
T ss_pred CCCCc---cchhhEEECcCCcccccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCCcCCc----ccc
Confidence 55442 24455555555555554432 245555555555555555 233455555555555554433 345
Q ss_pred CCCEEEccCCCCCC
Q 001142 258 NLQNLNLQYNKLLS 271 (1142)
Q Consensus 258 ~L~~L~Ls~N~L~~ 271 (1142)
+|+.|+|++|+|+.
T Consensus 262 ~L~~L~Ls~N~L~~ 275 (622)
T 3g06_A 262 GLLSLSVYRNQLTR 275 (622)
T ss_dssp TCCEEECCSSCCCS
T ss_pred cCcEEeCCCCCCCc
Confidence 55555555555553
No 317
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.91 E-value=2.1e-23 Score=257.51 Aligned_cols=227 Identities=22% Similarity=0.172 Sum_probs=196.6
Q ss_pred CCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCc
Q 001142 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLR 94 (1142)
Q Consensus 15 ~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~ 94 (1142)
..++++.|.+..|+|+.++. .+++|++|+|++|+|++..+ .+++|+.|+|++|+|+.||.. +++|+
T Consensus 79 ~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~l~~-------~l~~L~~L~L~~N~l~~lp~~---l~~L~ 144 (622)
T 3g06_A 79 LPPELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTHLPA-------LPSGLCKLWIFGNQLTSLPVL---PPGLQ 144 (622)
T ss_dssp CCTTCCEEEECSCCCSCCCC----CCTTCCEEEECSCCCCCCCC-------CCTTCCEEECCSSCCSCCCCC---CTTCC
T ss_pred cCCCCCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCCCCCC-------CCCCcCEEECCCCCCCcCCCC---CCCCC
Confidence 45689999999999999876 78999999999999998654 237899999999999999975 47899
Q ss_pred EEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCC
Q 001142 95 NLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1142)
Q Consensus 95 ~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1142)
+|+|++|+|+.+|.. +.+|+.|+|++|.+..+| ..+++|+.|++++|.+.. +|. .+++|+.|++++|
T Consensus 145 ~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~~l~---~~~~~L~~L~Ls~N~l~~----l~~---~~~~L~~L~L~~N 211 (622)
T 3g06_A 145 ELSVSDNQLASLPAL---PSELCKLWAYNNQLTSLP---MLPSGLQELSVSDNQLAS----LPT---LPSELYKLWAYNN 211 (622)
T ss_dssp EEECCSSCCSCCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC----CCC---CCTTCCEEECCSS
T ss_pred EEECcCCcCCCcCCc---cCCCCEEECCCCCCCCCc---ccCCCCcEEECCCCCCCC----CCC---ccchhhEEECcCC
Confidence 999999999999863 578999999999988887 567899999999977654 333 2478999999999
Q ss_pred CCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCccccc
Q 001142 175 SIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLC 254 (1142)
Q Consensus 175 ~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~ 254 (1142)
.|+.+|.. +++|+.|+|++|+|+.+| ..+++|+.|+|++|+|+.||. .+++|+.|+|++|+|+.++ ..|.
T Consensus 212 ~l~~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~~lp-~~l~ 281 (622)
T 3g06_A 212 RLTSLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLTRLP-ESLI 281 (622)
T ss_dssp CCSSCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCCSCC-GGGG
T ss_pred cccccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCCcCC-HHHh
Confidence 99999864 588999999999999999 456899999999999999998 6788999999999999765 5799
Q ss_pred CCCCCCEEEccCCCCCCCCCCCchhh
Q 001142 255 LMHNLQNLNLQYNKLLSYCQVPSWIC 280 (1142)
Q Consensus 255 ~L~~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1142)
.+++|+.|+|++|+|++ .+|..+.
T Consensus 282 ~l~~L~~L~L~~N~l~~--~~~~~l~ 305 (622)
T 3g06_A 282 HLSSETTVNLEGNPLSE--RTLQALR 305 (622)
T ss_dssp GSCTTCEEECCSCCCCH--HHHHHHH
T ss_pred hccccCEEEecCCCCCC--cCHHHHH
Confidence 99999999999999998 4555444
No 318
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=7e-24 Score=238.05 Aligned_cols=211 Identities=25% Similarity=0.257 Sum_probs=153.9
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEEEccCCCCCcCchhhcCCCC
Q 001142 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNLKFFGNEINLFPSEVGNLLG 115 (1142)
Q Consensus 37 f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~ 115 (1142)
+.++++++.|++++|+|+.+++..+ ++|+.|+|++|.|+.+ |..|..+++|++|+|++|.|+.+|.. +.+++
T Consensus 6 ~~~l~~l~~l~~~~~~l~~ip~~~~------~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~ 78 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTALPPDLP------KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPV 78 (290)
T ss_dssp EECSTTCCEEECTTSCCSSCCSCCC------TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTT
T ss_pred ccccCCccEEECCCCCCCcCCCCCC------CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCc
Confidence 4555666666666666665433221 4566666666666655 34566666666666666666655443 44555
Q ss_pred CCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEc
Q 001142 116 LECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDL 194 (1142)
Q Consensus 116 L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~L 194 (1142)
|+.|+|++|.+. .+|..+..+++|+.|+|++|+|+.+|. .|..+++|++|+|
T Consensus 79 L~~L~Ls~N~l~---------------------------~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 79 LGTLDLSHNQLQ---------------------------SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp CCEEECCSSCCS---------------------------SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCEEECCCCcCC---------------------------cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 555555544433 345556778888999999999998864 6899999999999
Q ss_pred cCCCCCccchh-hcCCCCCCEEEccCCCCCccCccc-cCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCC
Q 001142 195 SFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGL-YLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSY 272 (1142)
Q Consensus 195 s~N~L~~lP~~-l~~L~~L~~L~Ls~N~Ls~IP~~l-~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~ 272 (1142)
++|+|+.+|.. |..+++|+.|+|++|+|+.+|..+ ..+++|+.|+|++|+|+.+++ .+..+.+|+.|+|++|+|.|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~-~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPK-GFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCT-TTTTTCCCSEEECCSCCBCCS
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccCh-hhcccccCCeEEeCCCCccCc
Confidence 99999988654 678999999999999999998765 569999999999999997765 677788999999999999998
Q ss_pred CCCCchhhcc
Q 001142 273 CQVPSWICCN 282 (1142)
Q Consensus 273 ~~iP~~~~~~ 282 (1142)
|.+.....|.
T Consensus 211 c~~~~l~~wl 220 (290)
T 1p9a_G 211 CEILYFRRWL 220 (290)
T ss_dssp GGGHHHHHHH
T ss_pred CccHHHHHHH
Confidence 8765544443
No 319
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.91 E-value=2.8e-23 Score=254.86 Aligned_cols=147 Identities=17% Similarity=0.111 Sum_probs=120.1
Q ss_pred cCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCC
Q 001142 23 PSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGN 101 (1142)
Q Consensus 23 ~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N 101 (1142)
.-..-+|+.++.+ + -+++++|||++|+|+++.+..|..+ ++|++|+|++|.|+.||+ .|.+|++|++|+|++|
T Consensus 37 ~c~~~~l~~vP~~-l--p~~~~~LdLs~N~i~~l~~~~f~~l---~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N 110 (635)
T 4g8a_A 37 QCMELNFYKIPDN-L--PFSTKNLDLSFNPLRHLGSYSFFSF---PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 110 (635)
T ss_dssp ECTTSCCSSCCSS-S--CTTCCEEECTTSCCCEECTTTTTTC---TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred ECCCCCcCccCCC-C--CcCCCEEEeeCCCCCCCCHHHHhCC---CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCC
Confidence 3445567777643 1 1479999999999999888777655 999999999999999965 6999999999999999
Q ss_pred CCCcCchh-hcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCC
Q 001142 102 EINLFPSE-VGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1142)
Q Consensus 102 ~L~~lP~~-l~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1142)
+|+.+|.. |.+|++|++|+|++|++..++. .|..+++|++|+|++|.+... .+|..+..+++|+.|+|++|+|+
T Consensus 111 ~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~--~~~~~~~~l~~L~~L~L~~N~l~ 186 (635)
T 4g8a_A 111 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--KLPEYFSNLTNLEHLDLSSNKIQ 186 (635)
T ss_dssp CCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--CCCGGGGGCTTCCEEECCSSCCC
T ss_pred cCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccC--CCchhhccchhhhhhcccCcccc
Confidence 99998764 8899999999999999887764 699999999999999766432 34556677777777777777654
No 320
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.90 E-value=1.3e-22 Score=241.95 Aligned_cols=218 Identities=22% Similarity=0.168 Sum_probs=111.0
Q ss_pred ccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEcc
Q 001142 20 EKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFF 99 (1142)
Q Consensus 20 ~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls 99 (1142)
..|.+..|+|++++.. .++|++|+|++|++++ +|..+ ++|++|+|++|.++.+|... ++|++|+|+
T Consensus 74 ~~L~l~~~~l~~lp~~----~~~L~~L~l~~n~l~~-lp~~~------~~L~~L~l~~n~l~~l~~~~---~~L~~L~L~ 139 (454)
T 1jl5_A 74 HELELNNLGLSSLPEL----PPHLESLVASCNSLTE-LPELP------QSLKSLLVDNNNLKALSDLP---PLLEYLGVS 139 (454)
T ss_dssp SEEECTTSCCSCCCSC----CTTCSEEECCSSCCSS-CCCCC------TTCCEEECCSSCCSCCCSCC---TTCCEEECC
T ss_pred CEEEecCCccccCCCC----cCCCCEEEccCCcCCc-ccccc------CCCcEEECCCCccCcccCCC---CCCCEEECc
Confidence 4555555655555431 2455666666666655 33211 45555555555555554321 355555555
Q ss_pred CCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCcc
Q 001142 100 GNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL 179 (1142)
Q Consensus 100 ~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~I 179 (1142)
+|+|+.+| .|+++++|++|++++|.+..+|.. ..+|++|++++|.+.. +| .+.++++|+.|++++|+++.+
T Consensus 140 ~n~l~~lp-~~~~l~~L~~L~l~~N~l~~lp~~---~~~L~~L~L~~n~l~~----l~-~~~~l~~L~~L~l~~N~l~~l 210 (454)
T 1jl5_A 140 NNQLEKLP-ELQNSSFLKIIDVDNNSLKKLPDL---PPSLEFIAAGNNQLEE----LP-ELQNLPFLTAIYADNNSLKKL 210 (454)
T ss_dssp SSCCSSCC-CCTTCTTCCEEECCSSCCSCCCCC---CTTCCEEECCSSCCSS----CC-CCTTCTTCCEEECCSSCCSSC
T ss_pred CCCCCCCc-ccCCCCCCCEEECCCCcCcccCCC---cccccEEECcCCcCCc----Cc-cccCCCCCCEEECCCCcCCcC
Confidence 55555555 355555555555555554444432 2355555555543322 23 345555555555555555555
Q ss_pred CcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCC
Q 001142 180 PPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNL 259 (1142)
Q Consensus 180 P~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L 259 (1142)
|... ++|++|+|++|+++.+|. ++.+++|+.|+|++|+|+.+|.. +++|+.|+|++|+|++++. . +++|
T Consensus 211 ~~~~---~~L~~L~l~~n~l~~lp~-~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~l~~-~---~~~L 279 (454)
T 1jl5_A 211 PDLP---LSLESIVAGNNILEELPE-LQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTDLPE-L---PQSL 279 (454)
T ss_dssp CCCC---TTCCEEECCSSCCSSCCC-CTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSCCCC-C---CTTC
T ss_pred CCCc---CcccEEECcCCcCCcccc-cCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccccCc-c---cCcC
Confidence 4422 355555555555555552 55555555555555555555532 2445555555555555332 1 2445
Q ss_pred CEEEccCCCCCC
Q 001142 260 QNLNLQYNKLLS 271 (1142)
Q Consensus 260 ~~L~Ls~N~L~~ 271 (1142)
+.|++++|++++
T Consensus 280 ~~L~ls~N~l~~ 291 (454)
T 1jl5_A 280 TFLDVSENIFSG 291 (454)
T ss_dssp CEEECCSSCCSE
T ss_pred CEEECcCCccCc
Confidence 555555555554
No 321
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=4.9e-23 Score=231.18 Aligned_cols=197 Identities=19% Similarity=0.228 Sum_probs=166.1
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1142)
.+..+.+..|+|+.++...+ +++++|+|++|+|++..+..|..+ ++|++|+|++|.|+.+|.. ..+++|++|+
T Consensus 11 ~l~~l~~~~~~l~~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~ 83 (290)
T 1p9a_G 11 SHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPY---TRLTQLNLDRAELTKLQVD-GTLPVLGTLD 83 (290)
T ss_dssp TCCEEECTTSCCSSCCSCCC---TTCCEEECTTSCCSEEEGGGGTTC---TTCCEEECTTSCCCEEECC-SCCTTCCEEE
T ss_pred CccEEECCCCCCCcCCCCCC---CCCCEEEcCCCcCCccCHHHhhcC---CCCCEEECCCCccCcccCC-CCCCcCCEEE
Confidence 68889999999999986654 689999999999999888777655 9999999999999999765 7899999999
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCC
Q 001142 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1142)
Q Consensus 98 Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1142)
|++|+|+.+|..+.++++|+.|+|++|.++.++ |..|.++++|+.|+|++|+|+
T Consensus 84 Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l~--------------------------~~~~~~l~~L~~L~L~~N~l~ 137 (290)
T 1p9a_G 84 LSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLP--------------------------LGALRGLGELQELYLKGNELK 137 (290)
T ss_dssp CCSSCCSSCCCCTTTCTTCCEEECCSSCCCCCC--------------------------SSTTTTCTTCCEEECTTSCCC
T ss_pred CCCCcCCcCchhhccCCCCCEEECCCCcCcccC--------------------------HHHHcCCCCCCEEECCCCCCC
Confidence 999999999998988999999999888765544 234566777888888888888
Q ss_pred ccCcc-cCCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCC
Q 001142 178 YLPPE-IGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTS 247 (1142)
Q Consensus 178 ~IP~~-l~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~ 247 (1142)
.+|.. |..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|+|+.||..++.+.+|+.|+|++|.+..
T Consensus 138 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 138 TLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCC
T ss_pred ccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccC
Confidence 77654 57888888888888888888754 467888888999888888888888888888999999888764
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=5.9e-23 Score=227.61 Aligned_cols=221 Identities=19% Similarity=0.175 Sum_probs=183.0
Q ss_pred ccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccC
Q 001142 22 LPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFG 100 (1142)
Q Consensus 22 L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~ 100 (1142)
+.....+++.++.... ++|++|+|++|+|++..+..|+. +++|++|+|++|.|+.+|. .|.++++|++|+|++
T Consensus 12 ~~c~~~~l~~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~---l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 85 (276)
T 2z62_A 12 YQCMELNFYKIPDNLP---FSTKNLDLSFNPLRHLGSYSFFS---FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (276)
T ss_dssp EECTTSCCSSCCSSSC---TTCCEEECTTCCCCEECTTTTTT---CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred EEecCCCccccCCCCC---CCccEEECCCCcccccCHhHhcc---ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCC
Confidence 4445566666665321 57999999999999887766654 4899999999999998865 789999999999999
Q ss_pred CCCCcCc-hhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc
Q 001142 101 NEINLFP-SEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1142)
Q Consensus 101 N~L~~lP-~~l~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1142)
|.|+.++ ..|.++++|+.|++++|.+..++. .+..+++|++|++++|.+... .+|..+.++++|+.|+|++|+++.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--KLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--CCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee--cCchhhccCCCCCEEECCCCCCCc
Confidence 9999775 568899999999999999776654 688999999999999665432 357789999999999999999998
Q ss_pred cCc-ccCCCCCCC----EEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccc-cCCCCCCEEeCcCCcCCCCCc
Q 001142 179 LPP-EIGCLSNLE----QLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGL-YLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 179 IP~-~l~~L~~L~----~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l-~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
+|. .+..+++|+ .|+|++|.|+.+|..+....+|+.|+|++|+|+.+|..+ ..+++|+.|+|++|.+++..+
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 764 666666666 899999999999877777779999999999999988764 679999999999999986543
No 323
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=3.9e-23 Score=233.74 Aligned_cols=195 Identities=22% Similarity=0.286 Sum_probs=123.7
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCC
Q 001142 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGL 116 (1142)
Q Consensus 37 f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L 116 (1142)
+.++++|++|+|++|+++.. + .+ ..+++|++|+|++|.++.+|. +..+++|++|+|++|.|+.+| .+.++++|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~l-~-~~---~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~-~~~~l~~L 109 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTTI-E-GV---QYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS-AIAGLQSI 109 (308)
T ss_dssp HHHHHTCCEEECTTSCCCCC-T-TG---GGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG-GGTTCTTC
T ss_pred HHHcCCcCEEEeeCCCccCc-h-hh---hccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCch-hhcCCCCC
Confidence 44556666666666666543 2 22 233666666666666666655 666666666666666666554 35556666
Q ss_pred CEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccC
Q 001142 117 ECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSF 196 (1142)
Q Consensus 117 ~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~ 196 (1142)
+.|+|++|.+..++ .+..+++|+.|++++|.++.+|. +..+++|+.|+|++
T Consensus 110 ~~L~l~~n~l~~~~----------------------------~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~ 160 (308)
T 1h6u_A 110 KTLDLTSTQITDVT----------------------------PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGN 160 (308)
T ss_dssp CEEECTTSCCCCCG----------------------------GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCS
T ss_pred CEEECCCCCCCCch----------------------------hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccC
Confidence 66665555544332 25556666666666666666654 66667777777777
Q ss_pred CCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 197 NKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 197 N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
|+|+.+|. +..+++|+.|+|++|+|+.+|. +..+++|+.|+|++|+|+++++ +..+++|+.|+|++|++++
T Consensus 161 n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 161 AQVSDLTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp SCCCCCGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred CcCCCChh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 77776655 6667777777777777776654 6666777777777777776654 6677777777777777765
No 324
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=3.2e-24 Score=261.15 Aligned_cols=201 Identities=19% Similarity=0.176 Sum_probs=144.6
Q ss_pred ceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~~~~~~~~~ 889 (1142)
...++||+|+||.||+|.+.+..+++|....+..............++.+|++++++++||||+++..++...+..
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~---- 414 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNK---- 414 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTT----
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCcc----
Confidence 4567999999999999998899999998655432222222223345568999999999999999655555443322
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccC
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 969 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~ 969 (1142)
+|||||+++++|.++++. +..|+.||+.||+|||++||+||||||+|||++.
T Consensus 415 ----------~lVmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~----- 466 (540)
T 3en9_A 415 ----------RIMMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK----- 466 (540)
T ss_dssp ----------EEEEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-----
T ss_pred ----------EEEEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-----
Confidence 999999999999998753 5689999999999999999999999999999975
Q ss_pred CCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001142 970 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1049 (1142)
Q Consensus 970 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~P 1049 (1142)
.+||+|||+++............ ........||+.|||||++.... ..|+..+|+|+..+-..+.+.++.+
T Consensus 467 ----~~kL~DFGla~~~~~~~~~~~~~---~~~~~~~~GT~~y~APEv~~~~~--~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 467 ----DLYIIDFGLGKISNLDEDKAVDL---IVFKKAVLSTHHEKFDEIWERFL--EGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp ----SEEECCCTTCEECCCHHHHHHHH---HHHHHHHHHHCGGGHHHHHHHHH--HHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred ----eEEEEECccCEECCCccccccch---hhhhhhhcCCCCcCCHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHhccc
Confidence 49999999998765422110000 00012456999999999997532 3467888999999988888877766
Q ss_pred CC
Q 001142 1050 YM 1051 (1142)
Q Consensus 1050 f~ 1051 (1142)
|.
T Consensus 538 Y~ 539 (540)
T 3en9_A 538 YV 539 (540)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 325
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=4.6e-23 Score=232.91 Aligned_cols=228 Identities=19% Similarity=0.123 Sum_probs=182.1
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccc--cCCcCCcEEEccCCCCCc-Cc----hhhc
Q 001142 40 DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSV--GRYEKLRNLKFFGNEINL-FP----SEVG 111 (1142)
Q Consensus 40 l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l--~~L~~L~~L~Ls~N~L~~-lP----~~l~ 111 (1142)
...++.|++.++.++...-..+.....+++|++|+|++|.++ .+|..+ ..+++|++|+|++|.|+. +| ..+.
T Consensus 63 ~~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~ 142 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW 142 (310)
T ss_dssp SCCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT
T ss_pred hcceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh
Confidence 335788999988876421111111123367999999999998 457777 889999999999999984 33 3456
Q ss_pred CCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccc-hhhhcCCCCCcEEEccCCCCCccCcc----cCC
Q 001142 112 NLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTL-LSEIAGLKCLTKLSVCHFSIRYLPPE----IGC 185 (1142)
Q Consensus 112 ~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~n~~n~~~~~l-p~~l~~L~~L~~L~Ls~N~L~~IP~~----l~~ 185 (1142)
.+++|++|+|++|.+...+ ..+..+++|++|+|++|.+....+.. +..+..+++|++|+|++|+|+.+|.. +..
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~ 222 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAA 222 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhc
Confidence 7999999999999976655 67889999999999997653221111 22246889999999999999877653 478
Q ss_pred CCCCCEEEccCCCCCcc-chhhcCC---CCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCE
Q 001142 186 LSNLEQLDLSFNKMKYL-PTEICYL---KALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQN 261 (1142)
Q Consensus 186 L~~L~~L~Ls~N~L~~l-P~~l~~L---~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~ 261 (1142)
+++|++|+|++|+|+.+ |..++.+ ++|+.|+|++|+|+.||..+. ++|+.|+|++|+|++++. +..+++|+.
T Consensus 223 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~~~--~~~l~~L~~ 298 (310)
T 4glp_A 223 GVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRAPQ--PDELPEVDN 298 (310)
T ss_dssp TCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSCCC--TTSCCCCSC
T ss_pred CCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCCch--hhhCCCccE
Confidence 89999999999999966 8888776 699999999999999999886 799999999999999743 788999999
Q ss_pred EEccCCCCCC
Q 001142 262 LNLQYNKLLS 271 (1142)
Q Consensus 262 L~Ls~N~L~~ 271 (1142)
|+|++|+|+.
T Consensus 299 L~L~~N~l~~ 308 (310)
T 4glp_A 299 LTLDGNPFLV 308 (310)
T ss_dssp EECSSTTTSC
T ss_pred EECcCCCCCC
Confidence 9999999975
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.88 E-value=8e-22 Score=218.27 Aligned_cols=200 Identities=23% Similarity=0.294 Sum_probs=164.1
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNL 96 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~L 96 (1142)
....+.+..++|+.++.... ++|++|+|++|+|++..+..|+. +++|++|+|++|.|+.+|.. |.++++|++|
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~---l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L 90 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIP---ADTKKLDLQSNKLSSLPSKAFHR---LTKLRLLYLNDNKLQTLPAGIFKELKNLETL 90 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCC---TTCSEEECCSSCCSCCCTTSSSS---CTTCCEEECCSSCCSCCCTTTTSSCTTCCEE
T ss_pred CCCEEEccCCCCCccCCCCC---CCCCEEECcCCCCCeeCHHHhcC---CCCCCEEECCCCccCeeChhhhcCCCCCCEE
Confidence 45679999999999876433 68999999999999888766654 49999999999999999875 6889999999
Q ss_pred EccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001142 97 KFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1142)
+|++|.|+.+|.. |.++++|+.|+|++|.+..++ +..|..+++|+.|+|++|.
T Consensus 91 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------------------------~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 91 WVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLP--------------------------PRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp ECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCC--------------------------TTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCcCCHhHcccccCCCEEECCCCccCeeC--------------------------HHHhCcCcCCCEEECCCCc
Confidence 9999999988765 677888888888887755433 2345667788888888888
Q ss_pred CCccCcc-cCCCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeCcCCcCCCCC
Q 001142 176 IRYLPPE-IGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLG 249 (1142)
Q Consensus 176 L~~IP~~-l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~L~Ls~N~Ls~~~ 249 (1142)
|+.+|.. |..+++|+.|+|++|+|+.+|. .|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|.+...-
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 8877764 6888899999999999988764 577889999999999999888765 566889999999999886543
No 327
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=7.8e-23 Score=231.29 Aligned_cols=194 Identities=19% Similarity=0.216 Sum_probs=146.2
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1142)
+.+..|.+..|+|+.+. .|..+++|++|+|++|+|++..+ + .++++|++|+|++|.|+.+| .+..+++|++|
T Consensus 41 ~~L~~L~l~~~~i~~l~--~~~~l~~L~~L~L~~n~i~~~~~--~---~~l~~L~~L~L~~n~l~~~~-~~~~l~~L~~L 112 (308)
T 1h6u_A 41 DGITTLSAFGTGVTTIE--GVQYLNNLIGLELKDNQITDLAP--L---KNLTKITELELSGNPLKNVS-AIAGLQSIKTL 112 (308)
T ss_dssp HTCCEEECTTSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--G---TTCCSCCEEECCSCCCSCCG-GGTTCTTCCEE
T ss_pred CCcCEEEeeCCCccCch--hhhccCCCCEEEccCCcCCCChh--H---ccCCCCCEEEccCCcCCCch-hhcCCCCCCEE
Confidence 36888999999999885 68999999999999999998765 4 45599999999999999986 68999999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCC
Q 001142 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1142)
Q Consensus 97 ~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1142)
+|++|+|+.+|. +.++++|+.|+|++|.+..++. + ..+++|+.|+|++|++
T Consensus 113 ~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~-l---------------------------~~l~~L~~L~l~~n~l 163 (308)
T 1h6u_A 113 DLTSTQITDVTP-LAGLSNLQVLYLDLNQITNISP-L---------------------------AGLTNLQYLSIGNAQV 163 (308)
T ss_dssp ECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG-G---------------------------GGCTTCCEEECCSSCC
T ss_pred ECCCCCCCCchh-hcCCCCCCEEECCCCccCcCcc-c---------------------------cCCCCccEEEccCCcC
Confidence 999999999876 8999999999999888665543 3 3455555566666666
Q ss_pred CccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCc
Q 001142 177 RYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 177 ~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
+.+|. +..+++|+.|+|++|+|+.+|. +..+++|+.|+|++|+|+.+|+ +..+++|+.|+|++|.|++.+.
T Consensus 164 ~~~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 164 SDLTP-LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp CCCGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEECCCE
T ss_pred CCChh-hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeecCCe
Confidence 65544 5666666666666666665554 5566666666666666665553 5666666666666666665443
No 328
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.1e-21 Score=214.83 Aligned_cols=180 Identities=21% Similarity=0.284 Sum_probs=139.3
Q ss_pred CccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001142 69 SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1142)
Q Consensus 69 ~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n 147 (1142)
+.+++++++|.++.+|..+. ++|+.|+|++|.|+.++. .|.++++|++|+|++|.+..+
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------------------ 74 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL------------------ 74 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC------------------
T ss_pred CCeEEecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCcc------------------
Confidence 45667777777777776654 367777777777775543 466666666666665553322
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCcc
Q 001142 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVEL 225 (1142)
Q Consensus 148 ~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~Ls~I 225 (1142)
.+..|.++++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+|.. |..+++|+.|+|++|+|+.+
T Consensus 75 --------~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 75 --------SAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp --------CTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred --------CHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc
Confidence 23346667788888888888887765 568899999999999999988754 67899999999999999988
Q ss_pred Cc-cccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCC-CCCC
Q 001142 226 PS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSY-CQVP 276 (1142)
Q Consensus 226 P~-~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~-~~iP 276 (1142)
|. .+..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|.|. |++.
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~ 199 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEIL 199 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTTHH
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccccH
Confidence 76 577899999999999999999998899999999999999999986 5543
No 329
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1e-23 Score=245.36 Aligned_cols=237 Identities=19% Similarity=0.164 Sum_probs=193.9
Q ss_pred CCCCCCCCCCEEEccCCCCCCCCccccc-CCCCCCCccEEEeecCCCC----ccCccc-------cCCcCCcEEEccCCC
Q 001142 35 GSVNDDDDDSVIDVSGKTVDFPLIESYG-NRGGDNSVEGLYLYKNVLN----LIPKSV-------GRYEKLRNLKFFGNE 102 (1142)
Q Consensus 35 ~~f~~l~~L~~LdLs~N~L~~~~p~~~~-~l~~L~~L~~L~Ls~N~Lt----~iP~~l-------~~L~~L~~L~Ls~N~ 102 (1142)
..+..+++|++|+|++|+|+...+..++ .+..+++|++|+|++|.+. .+|..+ ..+++|++|+|++|.
T Consensus 26 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 26 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 3456788999999999999887554432 2456699999999997665 345444 688999999999999
Q ss_pred CCc-----CchhhcCCCCCCEEEccCCCCCCCc-----ccccCC---------CCCCEEECCCCCCC-CCcccchhhhcC
Q 001142 103 INL-----FPSEVGNLLGLECLQIKISSPGVNG-----FALNKL---------KGLKELELSKVPPR-PSVLTLLSEIAG 162 (1142)
Q Consensus 103 L~~-----lP~~l~~L~~L~~L~Ls~N~l~~~~-----~~~~~L---------~~L~~L~Ls~n~~n-~~~~~lp~~l~~ 162 (1142)
|+. +|..+.++++|+.|+|++|.++..+ ..+..+ ++|++|+|++|.+. .....+...+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 986 7888999999999999999975332 233344 89999999997765 223333367788
Q ss_pred CCCCcEEEccCCCCC------ccCcccCCCCCCCEEEccCCCC-----CccchhhcCCCCCCEEEccCCCCCc-----cC
Q 001142 163 LKCLTKLSVCHFSIR------YLPPEIGCLSNLEQLDLSFNKM-----KYLPTEICYLKALISLKVANNKLVE-----LP 226 (1142)
Q Consensus 163 L~~L~~L~Ls~N~L~------~IP~~l~~L~~L~~L~Ls~N~L-----~~lP~~l~~L~~L~~L~Ls~N~Ls~-----IP 226 (1142)
+++|+.|+|++|+|+ -+|..+..+++|+.|+|++|.| ..+|..+..+++|+.|+|++|.|+. +|
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 999999999999998 2455888999999999999999 5689999999999999999999983 57
Q ss_pred ccc--cCCCCCCEEeCcCCcCCC----CCcccc-cCCCCCCEEEccCCCCCC
Q 001142 227 SGL--YLLQRLENLDLSNNRLTS----LGSLDL-CLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 227 ~~l--~~L~~L~~L~Ls~N~Ls~----~~p~~l-~~L~~L~~L~Ls~N~L~~ 271 (1142)
..+ +.+++|+.|+|++|.|++ .+|..+ .++++|+.|+|++|++++
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 777 448999999999999998 355556 678999999999999987
No 330
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=7e-22 Score=214.46 Aligned_cols=193 Identities=15% Similarity=0.132 Sum_probs=134.8
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC-CCccCc-cccCCcCCcEEEccC-CCCCcCch-hhcCCCCCC
Q 001142 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV-LNLIPK-SVGRYEKLRNLKFFG-NEINLFPS-EVGNLLGLE 117 (1142)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~-Lt~iP~-~l~~L~~L~~L~Ls~-N~L~~lP~-~l~~L~~L~ 117 (1142)
+|++|+|++|+|++..+..|+. +++|++|+|++|. ++.+|. .|.++++|++|+|++ |+|+.+|. .|.++++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~---l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~ 108 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSN---LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLK 108 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTT---CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCC
T ss_pred cccEEEEeCCcceEECHHHccC---CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCC
Confidence 6666777777666665544433 3666677776665 666654 566666677777766 66666653 355666666
Q ss_pred EEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc---EEEccCC-CCCccCc-ccCCCCCCC-E
Q 001142 118 CLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT---KLSVCHF-SIRYLPP-EIGCLSNLE-Q 191 (1142)
Q Consensus 118 ~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~---~L~Ls~N-~L~~IP~-~l~~L~~L~-~ 191 (1142)
.|+|++|.+..+| . |..+++|+ .|++++| .++.+|. .|..+++|+ .
T Consensus 109 ~L~l~~n~l~~lp---------------------------~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~ 160 (239)
T 2xwt_C 109 FLGIFNTGLKMFP---------------------------D-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLT 160 (239)
T ss_dssp EEEEEEECCCSCC---------------------------C-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEE
T ss_pred EEeCCCCCCcccc---------------------------c-cccccccccccEEECCCCcchhhcCcccccchhcceeE
Confidence 6666655544333 2 44455555 8888888 8887766 478888888 8
Q ss_pred EEccCCCCCccchhhcCCCCCCEEEccCCC-CCccCc-cccCC-CCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCC
Q 001142 192 LDLSFNKMKYLPTEICYLKALISLKVANNK-LVELPS-GLYLL-QRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNK 268 (1142)
Q Consensus 192 L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~-Ls~IP~-~l~~L-~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~ 268 (1142)
|+|++|+|+.+|......++|+.|+|++|+ |+.+|. .+..+ ++|+.|+|++|+|+++++. .+++|+.|++++|.
T Consensus 161 L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 161 LKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNTW 237 (239)
T ss_dssp EECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC-
T ss_pred EEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCcc
Confidence 999888888888765555788899999994 888754 45667 8899999999999887764 56788888888763
No 331
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.87 E-value=2.9e-22 Score=226.31 Aligned_cols=203 Identities=17% Similarity=0.129 Sum_probs=169.4
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-C----ccccCCcCCcEEEccCCCCCcCc-hhhcCC
Q 001142 40 DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-P----KSVGRYEKLRNLKFFGNEINLFP-SEVGNL 113 (1142)
Q Consensus 40 l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P----~~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L 113 (1142)
+++|++|+|++|++++..|..+.. ..+++|++|+|++|.++.. | ..+..+++|++|+|++|.|+.+| ..|.++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~-~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLE-ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSS-CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred cCceeEEEeeCCEeccchhhhhhh-ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 456999999999999998876511 4559999999999999953 3 34567899999999999999765 568899
Q ss_pred CCCCEEEccCCCCCC---C--cccccCCCCCCEEECCCCCCCCCcccchhh-hcCCCCCcEEEccCCCCCcc-CcccCCC
Q 001142 114 LGLECLQIKISSPGV---N--GFALNKLKGLKELELSKVPPRPSVLTLLSE-IAGLKCLTKLSVCHFSIRYL-PPEIGCL 186 (1142)
Q Consensus 114 ~~L~~L~Ls~N~l~~---~--~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~-l~~L~~L~~L~Ls~N~L~~I-P~~l~~L 186 (1142)
++|++|+|++|.+.. + +..+..+++|++|+|++|.+.... ..+.. +..+++|+.|+|++|+|+.+ |..+..+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPT-GVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHH-HHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchH-HHHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 999999999998543 2 223478999999999997764322 22333 57889999999999999966 8888776
Q ss_pred ---CCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCC
Q 001142 187 ---SNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTS 247 (1142)
Q Consensus 187 ---~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~ 247 (1142)
++|++|+|++|+|+.+|..+. ++|+.|+|++|+|+.+|. +..+++|+.|+|++|+|+.
T Consensus 248 ~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRAPQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSCCC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCCch-hhhCCCccEEECcCCCCCC
Confidence 699999999999999998885 799999999999999876 7789999999999999984
No 332
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=3.3e-22 Score=221.81 Aligned_cols=197 Identities=24% Similarity=0.289 Sum_probs=96.8
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCC
Q 001142 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSK 146 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~ 146 (1142)
++|+.|++++|.++.++ .+..+++|++|+|++|.|+.++ .+.++++|++|+|++|.+..++. .+..+++|++|+|++
T Consensus 41 ~~L~~L~l~~~~i~~~~-~l~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 118 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSVQ-GIQYLPNVRYLALGGNKLHDIS-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE 118 (272)
T ss_dssp TTCCEEECTTSCCCCCT-TGGGCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cceeeeeeCCCCccccc-ccccCCCCcEEECCCCCCCCch-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC
Confidence 45555555555555443 2445555555555555555443 34455555555555554333222 233334444444443
Q ss_pred CCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCCCCc
Q 001142 147 VPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVE 224 (1142)
Q Consensus 147 n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~Ls~ 224 (1142)
|.+. ...+..|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++|+|+.
T Consensus 119 n~l~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 119 NQLQ---SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp SCCC---CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CcCC---ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 2221 11122344555555555555555554432 3555555555555555554433 24555555555555555554
Q ss_pred cCcc-ccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCch
Q 001142 225 LPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSW 278 (1142)
Q Consensus 225 IP~~-l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~ 278 (1142)
+|+. +..+++|+.|+|++|.+.+. ++.|++|++++|.+++ .+|.+
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g--~ip~~ 241 (272)
T 3rfs_A 196 VPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSG--VVRNS 241 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGG--GBBCT
T ss_pred cCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCC--cccCc
Confidence 4332 34455555555555555432 2345555555555555 34443
No 333
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=6.9e-22 Score=219.20 Aligned_cols=214 Identities=21% Similarity=0.192 Sum_probs=181.3
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001142 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n 147 (1142)
..+..+++..+.++.+ ..+..+++|+.|++++|.++.++ .+..+++|++|+|++|.+..++ .+..+++|++|+|++|
T Consensus 19 ~~l~~l~l~~~~~~~~-~~~~~l~~L~~L~l~~~~i~~~~-~l~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~L~~n 95 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA-VTQNELNSIDQIIANNSDIKSVQ-GIQYLPNVRYLALGGNKLHDIS-ALKELTNLTYLILTGN 95 (272)
T ss_dssp HHHHHHHHTCSCTTSE-ECHHHHTTCCEEECTTSCCCCCT-TGGGCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECTTS
T ss_pred HHHHHHHhcCcccccc-cccccccceeeeeeCCCCccccc-ccccCCCCcEEECCCCCCCCch-hhcCCCCCCEEECCCC
Confidence 4566777888877765 23667889999999999999886 4889999999999999987765 7889999999999996
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCCCCcc
Q 001142 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVEL 225 (1142)
Q Consensus 148 ~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~Ls~I 225 (1142)
.+. ...+..|.++++|+.|+|++|+++.+|.. |..+++|++|+|++|+|+.+|. .+..+++|+.|+|++|+|+.+
T Consensus 96 ~l~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 96 QLQ---SLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp CCC---CCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred ccC---ccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCcc
Confidence 554 33445678999999999999999988664 7899999999999999998865 468899999999999999988
Q ss_pred Ccc-ccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhccCCCCCCC
Q 001142 226 PSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKD 289 (1142)
Q Consensus 226 P~~-l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~ 289 (1142)
|.. +..+++|+.|+|++|+|+++++..+..+++|+.|+|++|++.| .+|....+.+..|.+.
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~--~~~~l~~l~~~~n~~~ 235 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC--TCPGIRYLSEWINKHS 235 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC--CTTTTHHHHHHHHHTG
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc--cCcHHHHHHHHHHhCC
Confidence 665 5779999999999999999999889999999999999999998 4665555555444444
No 334
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=1.2e-21 Score=212.74 Aligned_cols=180 Identities=17% Similarity=0.206 Sum_probs=143.4
Q ss_pred CccEEEeecCCCCccCc-cccCCcCCcEEEccCCC-CCcCch-hhcCCCCCCEEEccC-CCCCCCcccccCCCCCCEEEC
Q 001142 69 SVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNE-INLFPS-EVGNLLGLECLQIKI-SSPGVNGFALNKLKGLKELEL 144 (1142)
Q Consensus 69 ~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~-L~~lP~-~l~~L~~L~~L~Ls~-N~l~~~~~~~~~L~~L~~L~L 144 (1142)
+|++|+|++|.|+.+|. .|.++++|++|+|++|. |+.+|. .|.++++|+.|+|++ |.+..++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~-------------- 97 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID-------------- 97 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC--------------
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC--------------
Confidence 56666776666666654 56666666667776665 666654 455566666666655 4433222
Q ss_pred CCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCC---EEEccCC-CCCccch-hhcCCCCCC-EEEcc
Q 001142 145 SKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLE---QLDLSFN-KMKYLPT-EICYLKALI-SLKVA 218 (1142)
Q Consensus 145 s~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~---~L~Ls~N-~L~~lP~-~l~~L~~L~-~L~Ls 218 (1142)
+..|.++++|+.|++++|.++.+|. +..+++|+ +|+|++| +|+.+|. .|..+++|+ .|+|+
T Consensus 98 ------------~~~f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 98 ------------PDALKELPLLKFLGIFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp ------------TTSEECCTTCCEEEEEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred ------------HHHhCCCCCCCEEeCCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcC
Confidence 3457788999999999999999988 88889998 9999999 9998875 588999999 99999
Q ss_pred CCCCCccCccccCCCCCCEEeCcCCc-CCCCCcccccCC-CCCCEEEccCCCCCCCCCCCch
Q 001142 219 NNKLVELPSGLYLLQRLENLDLSNNR-LTSLGSLDLCLM-HNLQNLNLQYNKLLSYCQVPSW 278 (1142)
Q Consensus 219 ~N~Ls~IP~~l~~L~~L~~L~Ls~N~-Ls~~~p~~l~~L-~~L~~L~Ls~N~L~~~~~iP~~ 278 (1142)
+|+|+.||...+..++|+.|+|++|+ |+++++..|..+ ++|+.|+|++|+++. +|..
T Consensus 165 ~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~---l~~~ 223 (239)
T 2xwt_C 165 NNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA---LPSK 223 (239)
T ss_dssp SCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC---CCCT
T ss_pred CCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc---CChh
Confidence 99999999887777899999999995 999999889999 999999999999987 6654
No 335
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=1.1e-21 Score=239.71 Aligned_cols=178 Identities=20% Similarity=0.239 Sum_probs=95.6
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEc
Q 001142 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQI 121 (1142)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~L 121 (1142)
+|+.|+|++|+|++ +|..+ + ++|++|+|++|.|+.|| ..+++|++|+|++|+|+.||. +.+ +|+.|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~---~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--P---PQITVLEITQNALISLP---ELPASLEYLDACDNRLSTLPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--C---TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhH--c---CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCCcch-hhc--CCCEEEC
Confidence 66777777777766 33322 1 56677777777777666 335667777777777766666 544 6666666
Q ss_pred cCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCc
Q 001142 122 KISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKY 201 (1142)
Q Consensus 122 s~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~ 201 (1142)
++|.++.+|. .+++| +.|+|++|.|+.||. .+++|+.|+|++|+|+.
T Consensus 128 s~N~l~~lp~---~l~~L---------------------------~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 128 DNNQLTMLPE---LPALL---------------------------EYINADNNQLTMLPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CSSCCSCCCC---CCTTC---------------------------CEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC
T ss_pred CCCcCCCCCC---cCccc---------------------------cEEeCCCCccCcCCC---cCCCcCEEECCCCCCCC
Confidence 6666555443 34444 445555555544444 34445555555555555
Q ss_pred cchhhcCCCCCCEEEccCCCCCccCccccCCCCC-------CEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 202 LPTEICYLKALISLKVANNKLVELPSGLYLLQRL-------ENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 202 lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L-------~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|. |. ++|+.|+|++|+|+.||. +.. +| +.|+|++|+|+.+++ .+..+++|+.|+|++|+|++
T Consensus 175 lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~-~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 175 LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRITHIPE-NILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCCCCCG-GGGGSCTTEEEECCSSSCCH
T ss_pred cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcceecCH-HHhcCCCCCEEEeeCCcCCC
Confidence 544 33 455555555555555544 332 34 555555555554333 33345555555555555544
No 336
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.85 E-value=4.9e-21 Score=233.93 Aligned_cols=181 Identities=22% Similarity=0.219 Sum_probs=134.7
Q ss_pred CCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEc
Q 001142 92 KLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1142)
Q Consensus 92 ~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~L 171 (1142)
+|+.|+|++|.|+.||..+. ++|+.|+|++|.+..+| ..+++|++|+|++|.+.. +|. +.+ +|+.|+|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~----ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP--PQITVLEITQNALISLP---ELPASLEYLDACDNRLST----LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC----CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCC----cch-hhc--CCCEEEC
Confidence 56666666666666665543 55666666666655555 345666677777654433 344 443 8999999
Q ss_pred cCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcc
Q 001142 172 CHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSL 251 (1142)
Q Consensus 172 s~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~ 251 (1142)
++|.|+.||. .+++|+.|+|++|+|+.||. .+++|+.|+|++|+|+.||. +. ++|+.|+|++|+|+.+++
T Consensus 128 s~N~l~~lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~~lp~- 197 (571)
T 3cvr_A 128 DNNQLTMLPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLESLPA- 197 (571)
T ss_dssp CSSCCSCCCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCSSCCC-
T ss_pred CCCcCCCCCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCCchhh-
Confidence 9999999988 68999999999999999987 67899999999999999998 66 899999999999997765
Q ss_pred cccCCCCC-------CEEEccCCCCCCCCCCCchhhccCCCCCCCCCCCCcccccc
Q 001142 252 DLCLMHNL-------QNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1142)
Q Consensus 252 ~l~~L~~L-------~~L~Ls~N~L~~~~~iP~~~~~~l~~n~l~~~~~~~~~~~~ 300 (1142)
|.. +| +.|+|++|+|+. ||..+........+...+|.+.+..+
T Consensus 198 -~~~--~L~~~~~~L~~L~Ls~N~l~~---lp~~l~~l~~L~~L~L~~N~l~~~~p 247 (571)
T 3cvr_A 198 -VPV--RNHHSEETEIFFRCRENRITH---IPENILSLDPTCTIILEDNPLSSRIR 247 (571)
T ss_dssp -CC----------CCEEEECCSSCCCC---CCGGGGGSCTTEEEECCSSSCCHHHH
T ss_pred -HHH--hhhcccccceEEecCCCccee---cCHHHhcCCCCCEEEeeCCcCCCcCH
Confidence 544 77 999999999996 88877665555556666665554443
No 337
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=3.8e-22 Score=232.05 Aligned_cols=235 Identities=15% Similarity=0.123 Sum_probs=192.9
Q ss_pred CCCcccccCCCCCCcccCC----CCCCCCCCCCEEEccCCC---CCCCCccccc----CCCCCCCccEEEeecCCCCc--
Q 001142 16 GPIKEKLPSEANKINNEKN----GSVNDDDDDSVIDVSGKT---VDFPLIESYG----NRGGDNSVEGLYLYKNVLNL-- 82 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~~l~~----~~f~~l~~L~~LdLs~N~---L~~~~p~~~~----~l~~L~~L~~L~Ls~N~Lt~-- 82 (1142)
.+.++.|.+..|+|+.... ..|..+++|++|+|++|. +++.+|..+. .+..+++|++|+|++|.|+.
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 3478999999999988754 348899999999999964 4555565442 12456999999999999996
Q ss_pred ---cCccccCCcCCcEEEccCCCCCc-----CchhhcCC---------CCCCEEEccCCCCC--CCc---ccccCCCCCC
Q 001142 83 ---IPKSVGRYEKLRNLKFFGNEINL-----FPSEVGNL---------LGLECLQIKISSPG--VNG---FALNKLKGLK 140 (1142)
Q Consensus 83 ---iP~~l~~L~~L~~L~Ls~N~L~~-----lP~~l~~L---------~~L~~L~Ls~N~l~--~~~---~~~~~L~~L~ 140 (1142)
+|..+..+++|++|+|++|.|+. ++..+..+ ++|+.|+|++|.++ .++ ..+..+++|+
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 78889999999999999999973 34445445 99999999999976 333 3567899999
Q ss_pred EEECCCCCCCC--CcccchhhhcCCCCCcEEEccCCCC-----CccCcccCCCCCCCEEEccCCCCCc-----cchhh--
Q 001142 141 ELELSKVPPRP--SVLTLLSEIAGLKCLTKLSVCHFSI-----RYLPPEIGCLSNLEQLDLSFNKMKY-----LPTEI-- 206 (1142)
Q Consensus 141 ~L~Ls~n~~n~--~~~~lp~~l~~L~~L~~L~Ls~N~L-----~~IP~~l~~L~~L~~L~Ls~N~L~~-----lP~~l-- 206 (1142)
+|+|++|.+.. .....|..+..+++|+.|+|++|.| ..+|..+..+++|+.|+|++|.|+. +|..+
T Consensus 191 ~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~ 270 (386)
T 2ca6_A 191 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSK 270 (386)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHT
T ss_pred EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhh
Confidence 99999976641 1123444788999999999999999 4578889999999999999999984 57777
Q ss_pred cCCCCCCEEEccCCCCCc-----cCccc-cCCCCCCEEeCcCCcCCCCCc
Q 001142 207 CYLKALISLKVANNKLVE-----LPSGL-YLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 207 ~~L~~L~~L~Ls~N~Ls~-----IP~~l-~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
+.+++|+.|+|++|.|+. +|..+ .++++|+.|+|++|+|++..+
T Consensus 271 ~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 271 LENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred ccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 449999999999999996 89888 568999999999999998875
No 338
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.84 E-value=5.5e-22 Score=229.11 Aligned_cols=246 Identities=13% Similarity=0.119 Sum_probs=192.1
Q ss_pred cCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCc----ccccCCCCCC-CccEEEeecCCCCcc-CccccCC-----c
Q 001142 23 PSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLI----ESYGNRGGDN-SVEGLYLYKNVLNLI-PKSVGRY-----E 91 (1142)
Q Consensus 23 ~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p----~~~~~l~~L~-~L~~L~Ls~N~Lt~i-P~~l~~L-----~ 91 (1142)
.+..|++++..+..+...++|++|||++|+|++..+ +.+..+ + +|++|+|++|.|+.. +..|..+ +
T Consensus 4 ~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~---~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~ 80 (362)
T 3goz_A 4 KLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANT---PASVTSLNLSGNSLGFKNSDELVQILAAIPA 80 (362)
T ss_dssp ECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTC---CTTCCEEECCSSCGGGSCHHHHHHHHHTSCT
T ss_pred ccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhC---CCceeEEECcCCCCCHHHHHHHHHHHhccCC
Confidence 466788888777777777789999999999998877 555444 7 899999999999966 5556664 8
Q ss_pred CCcEEEccCCCCCcCc-hh----hcCC-CCCCEEEccCCCCCCCcc-c----ccC-CCCCCEEECCCCCCCCCc-ccchh
Q 001142 92 KLRNLKFFGNEINLFP-SE----VGNL-LGLECLQIKISSPGVNGF-A----LNK-LKGLKELELSKVPPRPSV-LTLLS 158 (1142)
Q Consensus 92 ~L~~L~Ls~N~L~~lP-~~----l~~L-~~L~~L~Ls~N~l~~~~~-~----~~~-L~~L~~L~Ls~n~~n~~~-~~lp~ 158 (1142)
+|++|+|++|.|+..+ .. +..+ ++|+.|+|++|.++..+. . +.. .++|++|+|++|.+.... ..++.
T Consensus 81 ~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 160 (362)
T 3goz_A 81 NVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQ 160 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHH
T ss_pred CccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHH
Confidence 9999999999998554 33 4455 899999999999776653 2 334 369999999997654322 24556
Q ss_pred hhcCCC-CCcEEEccCCCCCccCc-----ccCCC-CCCCEEEccCCCCCc-----cchhhcCC-CCCCEEEccCCCCCcc
Q 001142 159 EIAGLK-CLTKLSVCHFSIRYLPP-----EIGCL-SNLEQLDLSFNKMKY-----LPTEICYL-KALISLKVANNKLVEL 225 (1142)
Q Consensus 159 ~l~~L~-~L~~L~Ls~N~L~~IP~-----~l~~L-~~L~~L~Ls~N~L~~-----lP~~l~~L-~~L~~L~Ls~N~Ls~I 225 (1142)
.+..++ +|+.|+|++|+|+..+. .+..+ ++|+.|+|++|.|+. ++..+..+ ++|+.|+|++|.|+.+
T Consensus 161 ~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 240 (362)
T 3goz_A 161 ILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGP 240 (362)
T ss_dssp HHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCC
T ss_pred HHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcH
Confidence 666776 99999999999985543 34455 599999999999986 77777774 5999999999999865
Q ss_pred C-----ccccCCCCCCEEeCcCCcCCCCCcc-------cccCCCCCCEEEccCCCCCC
Q 001142 226 P-----SGLYLLQRLENLDLSNNRLTSLGSL-------DLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 226 P-----~~l~~L~~L~~L~Ls~N~Ls~~~p~-------~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+ ..+..+++|+.|+|++|.++++.+. .+..+++|+.|||++|++..
T Consensus 241 ~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 241 SLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp CHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 4 3346689999999999997776654 56788899999999999876
No 339
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=2.6e-20 Score=214.14 Aligned_cols=234 Identities=16% Similarity=0.118 Sum_probs=160.8
Q ss_pred cccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCc-cccCCcCCcE-EE
Q 001142 21 KLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPK-SVGRYEKLRN-LK 97 (1142)
Q Consensus 21 ~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~-~l~~L~~L~~-L~ 97 (1142)
.+....++|+.++... .+++++|+|++|+|+.+.+..|+. +++|++|+|++|.+. .+|. .|.++++|.. +.
T Consensus 13 ~v~C~~~~Lt~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~~---l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 13 VFLCQESKVTEIPSDL---PRNAIELRFVLTKLRVIQKGAFSG---FGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRI 86 (350)
T ss_dssp EEEEESTTCCSCCTTC---CTTCSEEEEESCCCSEECTTSSTT---CTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEE
T ss_pred EEEecCCCCCccCcCc---CCCCCEEEccCCcCCCcCHHHHcC---CCCCCEEECcCCCCCCccChhHhhcchhhhhhhc
Confidence 3555667777776433 246788888888887766655543 478888888888764 4654 5677776654 66
Q ss_pred ccCCCCCcCc-hhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccch-hhhcCCC-CCcEEEccC
Q 001142 98 FFGNEINLFP-SEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLL-SEIAGLK-CLTKLSVCH 173 (1142)
Q Consensus 98 Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~n~~n~~~~~lp-~~l~~L~-~L~~L~Ls~ 173 (1142)
+++|+|+.+| ..|.++++|++|++++|.+..++. .+....++..|++.++ +....+| ..|..+. .|+.|+|++
T Consensus 87 ~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~---~~i~~l~~~~f~~~~~~l~~L~L~~ 163 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN---INIHTIERNSFVGLSFESVILWLNK 163 (350)
T ss_dssp EEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC---TTCCEECTTSSTTSBSSCEEEECCS
T ss_pred ccCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc---cccccccccchhhcchhhhhhcccc
Confidence 6678888774 446778888888888887665553 4555666777777652 2233333 3445543 577888888
Q ss_pred CCCCccCcccCCCCCCCEEEccC-CCCCccch-hhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcC-CcCCCCCc
Q 001142 174 FSIRYLPPEIGCLSNLEQLDLSF-NKMKYLPT-EICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSN-NRLTSLGS 250 (1142)
Q Consensus 174 N~L~~IP~~l~~L~~L~~L~Ls~-N~L~~lP~-~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~-N~Ls~~~p 250 (1142)
|+|+.||..+....+|+.|+|++ |.++.||. .|..+++|+.|+|++|+|+.||... +.+|+.|.+.+ +.++.+|
T Consensus 164 N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~--~~~L~~L~~l~~~~l~~lP- 240 (350)
T 4ay9_X 164 NGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG--LENLKKLRARSTYNLKKLP- 240 (350)
T ss_dssp SCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS--CTTCCEEECTTCTTCCCCC-
T ss_pred ccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh--hccchHhhhccCCCcCcCC-
Confidence 88888888777777888888874 77888875 4678888888888888888888643 45566666444 4555555
Q ss_pred ccccCCCCCCEEEccCC
Q 001142 251 LDLCLMHNLQNLNLQYN 267 (1142)
Q Consensus 251 ~~l~~L~~L~~L~Ls~N 267 (1142)
.+..+++|+.++++++
T Consensus 241 -~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 241 -TLEKLVALMEASLTYP 256 (350)
T ss_dssp -CTTTCCSCCEEECSCH
T ss_pred -CchhCcChhhCcCCCC
Confidence 3778888888888754
No 340
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.83 E-value=7.7e-20 Score=200.13 Aligned_cols=175 Identities=22% Similarity=0.275 Sum_probs=137.4
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEE
Q 001142 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECL 119 (1142)
Q Consensus 42 ~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L 119 (1142)
+.+++|+++|+++.+++. +. ++|+.|+|++|.|+.++. .|.++++|++|+|++|.|+.++. .|.++++|+.|
T Consensus 15 ~~~~l~~~~~~l~~~p~~-~~-----~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 88 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSG-IP-----ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTL 88 (251)
T ss_dssp GGTEEECTTCCCSSCCSC-CC-----TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCeEEecCCCCccccCCC-CC-----CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEE
Confidence 467889999988865543 21 578899999999987754 68888999999999999987654 47778888888
Q ss_pred EccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCC
Q 001142 120 QIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNK 198 (1142)
Q Consensus 120 ~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~ 198 (1142)
+|++|.+..++ +..|..+++|+.|+|++|+|+.+|.. |..+++|+.|+|++|+
T Consensus 89 ~L~~n~l~~~~--------------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 142 (251)
T 3m19_A 89 GLANNQLASLP--------------------------LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQ 142 (251)
T ss_dssp ECTTSCCCCCC--------------------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcccccC--------------------------hhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCc
Confidence 88877655433 22455677788888888888877664 5788889999999999
Q ss_pred CCccch-hhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeCcCCcCCCC
Q 001142 199 MKYLPT-EICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSL 248 (1142)
Q Consensus 199 L~~lP~-~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~ 248 (1142)
|+.+|. .|..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++|.+++.
T Consensus 143 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 143 LQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 988865 68888899999999999987765 567788999999999998876
No 341
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.83 E-value=1.3e-21 Score=222.37 Aligned_cols=241 Identities=18% Similarity=0.176 Sum_probs=168.4
Q ss_pred CcccccCCCCCCcccCCCCCCCC--CCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCc--cCccccCCcCC
Q 001142 18 IKEKLPSEANKINNEKNGSVNDD--DDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNL--IPKSVGRYEKL 93 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l--~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~--iP~~l~~L~~L 93 (1142)
....+++..|++. +..+..+ ++++.|+|++|.+++.++.. ..+++|++|+|++|.++. +|..+..+++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~----~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L 120 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEH----FSPFRVQHMDLSNSVIEVSTLHGILSQCSKL 120 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSC----CCCBCCCEEECTTCEECHHHHHHHHTTBCCC
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhh----ccCCCCCEEEccCCCcCHHHHHHHHhhCCCC
Confidence 4667777777665 3445555 78888888888888776652 245788888888888773 67777888888
Q ss_pred cEEEccCCCCC-cCchhhcCCCCCCEEEccCC-CCCC--CcccccCCCCCCEEECCCC-CCCCCcccchhhhcCCC-CCc
Q 001142 94 RNLKFFGNEIN-LFPSEVGNLLGLECLQIKIS-SPGV--NGFALNKLKGLKELELSKV-PPRPSVLTLLSEIAGLK-CLT 167 (1142)
Q Consensus 94 ~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N-~l~~--~~~~~~~L~~L~~L~Ls~n-~~n~~~~~lp~~l~~L~-~L~ 167 (1142)
++|+|++|.++ .+|..++++++|+.|+|++| .++. ++..+..+++|++|++++| .+.. ..++..+..++ +|+
T Consensus 121 ~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~--~~~~~~~~~l~~~L~ 198 (336)
T 2ast_B 121 QNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE--KHVQVAVAHVSETIT 198 (336)
T ss_dssp SEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH--HHHHHHHHHSCTTCC
T ss_pred CEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh--HHHHHHHHhcccCCC
Confidence 88888888887 56777888888888888887 4553 4555777888888888875 3321 12455667777 888
Q ss_pred EEEccCCC--CC--ccCcccCCCCCCCEEEccCCC-CC-ccchhhcCCCCCCEEEccCCC-CC-ccCccccCCCCCCEEe
Q 001142 168 KLSVCHFS--IR--YLPPEIGCLSNLEQLDLSFNK-MK-YLPTEICYLKALISLKVANNK-LV-ELPSGLYLLQRLENLD 239 (1142)
Q Consensus 168 ~L~Ls~N~--L~--~IP~~l~~L~~L~~L~Ls~N~-L~-~lP~~l~~L~~L~~L~Ls~N~-Ls-~IP~~l~~L~~L~~L~ 239 (1142)
.|++++|. ++ .+|..+..+++|+.|+|++|. ++ ..+..+..+++|+.|+|++|. ++ .....+.++++|+.|+
T Consensus 199 ~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~ 278 (336)
T 2ast_B 199 QLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQ 278 (336)
T ss_dssp EEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEE
T ss_pred EEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEe
Confidence 88888883 43 466666778888888888888 55 556777788888888888884 32 1112466788888888
Q ss_pred CcCCcCCCCCcccccCCC-CCCEEEccCCCCCC
Q 001142 240 LSNNRLTSLGSLDLCLMH-NLQNLNLQYNKLLS 271 (1142)
Q Consensus 240 Ls~N~Ls~~~p~~l~~L~-~L~~L~Ls~N~L~~ 271 (1142)
|++| ++ ...+..+. .|..|++++|++++
T Consensus 279 l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~ 307 (336)
T 2ast_B 279 VFGI-VP---DGTLQLLKEALPHLQINCSHFTT 307 (336)
T ss_dssp CTTS-SC---TTCHHHHHHHSTTSEESCCCSCC
T ss_pred ccCc-cC---HHHHHHHHhhCcceEEecccCcc
Confidence 8887 33 22333332 36666678888877
No 342
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.83 E-value=2.4e-22 Score=238.20 Aligned_cols=252 Identities=17% Similarity=0.095 Sum_probs=149.7
Q ss_pred CCcccccCCCCCCcccCCCC-CCCCC----CCCEEEccCCCCCC----CCcccccCCCCCCCccEEEeecCCCCcc-Ccc
Q 001142 17 PIKEKLPSEANKINNEKNGS-VNDDD----DDSVIDVSGKTVDF----PLIESYGNRGGDNSVEGLYLYKNVLNLI-PKS 86 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~-f~~l~----~L~~LdLs~N~L~~----~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~ 86 (1142)
+.++.|.+..|+|+...... +..++ +|++|+|++|+|+. .++..+. .+++|++|+|++|.++.. +..
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~---~~~~L~~L~Ls~n~i~~~~~~~ 132 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLR---TLPTLQELHLSDNLLGDAGLQL 132 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTT---SCTTCCEEECCSSBCHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHc---cCCceeEEECCCCcCchHHHHH
Confidence 46777777777776643322 22333 57778888777763 3344443 347777777777777632 222
Q ss_pred c-----cCCcCCcEEEccCCCCCc-----CchhhcCCCCCCEEEccCCCCCCCcc-ccc-----CCCCCCEEECCCCCCC
Q 001142 87 V-----GRYEKLRNLKFFGNEINL-----FPSEVGNLLGLECLQIKISSPGVNGF-ALN-----KLKGLKELELSKVPPR 150 (1142)
Q Consensus 87 l-----~~L~~L~~L~Ls~N~L~~-----lP~~l~~L~~L~~L~Ls~N~l~~~~~-~~~-----~L~~L~~L~Ls~n~~n 150 (1142)
+ ..+++|++|+|++|.|+. ++..+..+++|+.|+|++|.++..+. .+. .+++|++|++++|.+.
T Consensus 133 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 212 (461)
T 1z7x_W 133 LCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVT 212 (461)
T ss_dssp HHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCB
T ss_pred HHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCc
Confidence 2 224567777777777763 35556667777777777776543221 111 2557777777775443
Q ss_pred CCc-ccchhhhcCCCCCcEEEccCCCCCcc------CcccCCCCCCCEEEccCCCCCc-----cchhhcCCCCCCEEEcc
Q 001142 151 PSV-LTLLSEIAGLKCLTKLSVCHFSIRYL------PPEIGCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKVA 218 (1142)
Q Consensus 151 ~~~-~~lp~~l~~L~~L~~L~Ls~N~L~~I------P~~l~~L~~L~~L~Ls~N~L~~-----lP~~l~~L~~L~~L~Ls 218 (1142)
... ..++..+..+++|+.|++++|.++.. +..+..+++|+.|+|++|+|+. +|..+..+++|+.|+|+
T Consensus 213 ~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls 292 (461)
T 1z7x_W 213 SDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLA 292 (461)
T ss_dssp TTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECT
T ss_pred HHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECC
Confidence 221 12455566677777777777776632 1222356677777777777764 56666667777777777
Q ss_pred CCCCCc-----cCccccC-CCCCCEEeCcCCcCCCC----CcccccCCCCCCEEEccCCCCCC
Q 001142 219 NNKLVE-----LPSGLYL-LQRLENLDLSNNRLTSL----GSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 219 ~N~Ls~-----IP~~l~~-L~~L~~L~Ls~N~Ls~~----~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|.++. +...+.. .++|+.|+|++|.+++. .+..+..+++|+.|+|++|+++.
T Consensus 293 ~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 293 GNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp TCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred CCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 777652 2222221 24666777777766654 23345556666666766666654
No 343
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.82 E-value=1.6e-20 Score=210.80 Aligned_cols=169 Identities=21% Similarity=0.241 Sum_probs=74.0
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001142 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n 147 (1142)
++|+.|++++|.++.+|. +..+++|++|+|++|+|+.++. +.++++|+.|+|++|.+..++. +..+++|++|++++|
T Consensus 46 ~~L~~L~l~~~~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~n 122 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLSS-LKDLKKLKSLSLEHN 122 (291)
T ss_dssp HTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGGG-GTTCTTCCEEECTTS
T ss_pred CcccEEEccCCCcccChh-HhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCChh-hccCCCCCEEECCCC
Confidence 444444444444444432 4444444444444444444443 4444444444444444333221 222333333333332
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001142 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1142)
Q Consensus 148 ~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1142)
.+... ..+..+++|+.|++++|+++.+ ..+..+++|+.|+|++|+|+.++. +..+++|+.|+|++|.|+.+|.
T Consensus 123 ~i~~~-----~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~l~~ 195 (291)
T 1h6t_A 123 GISDI-----NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDLRA 195 (291)
T ss_dssp CCCCC-----GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBCGG
T ss_pred cCCCC-----hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCCChh
Confidence 22111 1233444444444444444444 334444455555555555544433 4444455555555555544432
Q ss_pred cccCCCCCCEEeCcCCcCCC
Q 001142 228 GLYLLQRLENLDLSNNRLTS 247 (1142)
Q Consensus 228 ~l~~L~~L~~L~Ls~N~Ls~ 247 (1142)
+..+++|+.|+|++|+++.
T Consensus 196 -l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 196 -LAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GTTCTTCSEEEEEEEEEEC
T ss_pred -hccCCCCCEEECcCCcccC
Confidence 4444445555555554444
No 344
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=1.7e-20 Score=215.80 Aligned_cols=219 Identities=20% Similarity=0.135 Sum_probs=173.2
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCC-cCchh-hcCCCCCCE-E
Q 001142 44 SVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEIN-LFPSE-VGNLLGLEC-L 119 (1142)
Q Consensus 44 ~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~-~lP~~-l~~L~~L~~-L 119 (1142)
+++++++|+|+.++.. + .++|++|+|++|+|+.||. .|.+|++|++|+|++|+|. .+|.. |.++++|.. +
T Consensus 12 ~~v~C~~~~Lt~iP~~-l-----~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l 85 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSD-L-----PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIR 85 (350)
T ss_dssp TEEEEESTTCCSCCTT-C-----CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEE
T ss_pred CEEEecCCCCCccCcC-c-----CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhh
Confidence 6799999999976433 2 1689999999999999986 6899999999999999985 57654 778998876 5
Q ss_pred EccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC-CCCCccCc-ccCCCC-CCCEEEcc
Q 001142 120 QIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH-FSIRYLPP-EIGCLS-NLEQLDLS 195 (1142)
Q Consensus 120 ~Ls~N~l~~~-~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~-N~L~~IP~-~l~~L~-~L~~L~Ls 195 (1142)
.++.|++..+ +..|..+++|++|++++|.+... .+..+....++..|++.+ |++..+|. .|..+. .|+.|+|+
T Consensus 86 ~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~---~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~ 162 (350)
T 4ay9_X 86 IEKANNLLYINPEAFQNLPNLQYLLISNTGIKHL---PDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLN 162 (350)
T ss_dssp EEEETTCCEECTTSBCCCTTCCEEEEEEECCSSC---CCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECC
T ss_pred cccCCcccccCchhhhhccccccccccccccccC---Cchhhcccchhhhhhhccccccccccccchhhcchhhhhhccc
Confidence 6677887765 56899999999999999665432 233455667788888865 68888876 555554 68999999
Q ss_pred CCCCCccchhhcCCCCCCEEEcc-CCCCCccCcc-ccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccC-CCCCCC
Q 001142 196 FNKMKYLPTEICYLKALISLKVA-NNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQY-NKLLSY 272 (1142)
Q Consensus 196 ~N~L~~lP~~l~~L~~L~~L~Ls-~N~Ls~IP~~-l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~-N~L~~~ 272 (1142)
+|+|+.||..+....+|+.|+|+ +|.++.||.. +..+++|+.|+|++|+|+.+++..|.+ |+.|.+.+ |.+..
T Consensus 163 ~N~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~~---L~~L~~l~~~~l~~- 238 (350)
T 4ay9_X 163 KNGIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLEN---LKKLRARSTYNLKK- 238 (350)
T ss_dssp SSCCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCTT---CCEEECTTCTTCCC-
T ss_pred cccccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhcc---chHhhhccCCCcCc-
Confidence 99999999888888899999997 5788999875 567999999999999999998866555 45555444 34554
Q ss_pred CCCCc
Q 001142 273 CQVPS 277 (1142)
Q Consensus 273 ~~iP~ 277 (1142)
+|.
T Consensus 239 --lP~ 241 (350)
T 4ay9_X 239 --LPT 241 (350)
T ss_dssp --CCC
T ss_pred --CCC
Confidence 664
No 345
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=2.7e-20 Score=215.01 Aligned_cols=180 Identities=23% Similarity=0.218 Sum_probs=134.1
Q ss_pred cEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchh-hc-CCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001142 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSE-VG-NLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1142)
Q Consensus 71 ~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~-l~-~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~ 148 (1142)
+.+++++|.|+.||..+.. .|+.|+|++|+|+.+|.. +. ++++|+.|+|++|.+..++
T Consensus 21 ~~l~c~~~~l~~iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~------------------ 80 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFIS------------------ 80 (361)
T ss_dssp TEEECCSSCCSSCCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEEC------------------
T ss_pred CEEEeCCCCcCccCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccC------------------
Confidence 4566666666666665543 466666666666655443 33 5555555555555433222
Q ss_pred CCCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccC
Q 001142 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELP 226 (1142)
Q Consensus 149 ~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP 226 (1142)
+..|.++++|+.|+|++|+|+.+|. .|..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|
T Consensus 81 --------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 81 --------SEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp --------TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred --------hhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 2345667778888888888887765 578889999999999999976 677888999999999999999998
Q ss_pred ccc----cCCCCCCEEeCcCCcCCCCCcccccCCCC--CCEEEccCCCCCCCCCCCch
Q 001142 227 SGL----YLLQRLENLDLSNNRLTSLGSLDLCLMHN--LQNLNLQYNKLLSYCQVPSW 278 (1142)
Q Consensus 227 ~~l----~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~--L~~L~Ls~N~L~~~~~iP~~ 278 (1142)
..+ ..+++|+.|+|++|+|+++++..|..++. |+.|+|++|+|.|.|++-.+
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~~~ 210 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQL 210 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHHHHH
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCcHHH
Confidence 776 46899999999999999999888888887 48899999999998876544
No 346
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.82 E-value=6.9e-21 Score=219.90 Aligned_cols=224 Identities=17% Similarity=0.134 Sum_probs=178.6
Q ss_pred EEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-----ccccCCc-CCcEEEccCCCCCcC-chhhcCC----
Q 001142 45 VIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-----KSVGRYE-KLRNLKFFGNEINLF-PSEVGNL---- 113 (1142)
Q Consensus 45 ~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-----~~l~~L~-~L~~L~Ls~N~L~~l-P~~l~~L---- 113 (1142)
+++|++|++++.+|..+... ++|++|+|++|.|+.++ ..|..++ +|++|+|++|.|+.. +..+..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~---~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~ 78 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIP---HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAI 78 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSC---TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTS
T ss_pred ccccccccchHHHHHHHhCC---CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhcc
Confidence 57899999999999876544 67999999999999886 5678888 899999999999855 5566664
Q ss_pred -CCCCEEEccCCCCCCCccc-----ccCC-CCCCEEECCCCCCCCCccc-chhhhcCC-CCCcEEEccCCCCC-----cc
Q 001142 114 -LGLECLQIKISSPGVNGFA-----LNKL-KGLKELELSKVPPRPSVLT-LLSEIAGL-KCLTKLSVCHFSIR-----YL 179 (1142)
Q Consensus 114 -~~L~~L~Ls~N~l~~~~~~-----~~~L-~~L~~L~Ls~n~~n~~~~~-lp~~l~~L-~~L~~L~Ls~N~L~-----~I 179 (1142)
++|++|+|++|.++..+.. +..+ ++|++|+|++|.+...... +...+..+ ++|+.|+|++|.|+ .+
T Consensus 79 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 158 (362)
T 3goz_A 79 PANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL 158 (362)
T ss_dssp CTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred CCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH
Confidence 9999999999997765532 5555 8999999999765433221 22234453 69999999999998 34
Q ss_pred CcccCCCC-CCCEEEccCCCCCcc-ch----hhcCC-CCCCEEEccCCCCCc-----cCccccC-CCCCCEEeCcCCcCC
Q 001142 180 PPEIGCLS-NLEQLDLSFNKMKYL-PT----EICYL-KALISLKVANNKLVE-----LPSGLYL-LQRLENLDLSNNRLT 246 (1142)
Q Consensus 180 P~~l~~L~-~L~~L~Ls~N~L~~l-P~----~l~~L-~~L~~L~Ls~N~Ls~-----IP~~l~~-L~~L~~L~Ls~N~Ls 246 (1142)
+..+..++ +|++|+|++|+|+.. +. .+..+ ++|+.|+|++|.|+. +|..+.. .++|+.|+|++|.|+
T Consensus 159 ~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 238 (362)
T 3goz_A 159 IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLH 238 (362)
T ss_dssp HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCC
T ss_pred HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 55566665 999999999999855 33 34455 599999999999986 7777776 458999999999999
Q ss_pred CCCcc----cccCCCCCCEEEccCCCCCC
Q 001142 247 SLGSL----DLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 247 ~~~p~----~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+..+. .+..+++|+.|+|++|.+..
T Consensus 239 ~~~~~~l~~~~~~l~~L~~L~L~~n~l~~ 267 (362)
T 3goz_A 239 GPSLENLKLLKDSLKHLQTVYLDYDIVKN 267 (362)
T ss_dssp CCCHHHHHHTTTTTTTCSEEEEEHHHHTT
T ss_pred cHHHHHHHHHHhcCCCccEEEeccCCccc
Confidence 88763 35678999999999999654
No 347
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.81 E-value=6.8e-22 Score=234.29 Aligned_cols=251 Identities=15% Similarity=0.120 Sum_probs=106.0
Q ss_pred CcccccCCCCCCcccC----CCCCCCCCCCCEEEccCCCCCCCCcccc-cCCCCCC-CccEEEeecCCCC-----ccCcc
Q 001142 18 IKEKLPSEANKINNEK----NGSVNDDDDDSVIDVSGKTVDFPLIESY-GNRGGDN-SVEGLYLYKNVLN-----LIPKS 86 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~----~~~f~~l~~L~~LdLs~N~L~~~~p~~~-~~l~~L~-~L~~L~Ls~N~Lt-----~iP~~ 86 (1142)
.++.|.+..|+|+... ...|..+++|++|||++|.|+...+..+ ..+.... +|++|+|++|.|+ .+|..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 3444444444444321 1233444455555555555443222211 1121000 3555555555554 23444
Q ss_pred ccCCcCCcEEEccCCCCCcC-chhh-----cCCCCCCEEEccCCCCCCC-----cccccCCCCCCEEECCCCCCCCCccc
Q 001142 87 VGRYEKLRNLKFFGNEINLF-PSEV-----GNLLGLECLQIKISSPGVN-----GFALNKLKGLKELELSKVPPRPSVLT 155 (1142)
Q Consensus 87 l~~L~~L~~L~Ls~N~L~~l-P~~l-----~~L~~L~~L~Ls~N~l~~~-----~~~~~~L~~L~~L~Ls~n~~n~~~~~ 155 (1142)
|..+++|++|+|++|.|+.. +..+ ..+++|+.|+|++|.++.. +..+..+++|++|++++|.+. ..
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~---~~ 185 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN---EA 185 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH---HH
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc---hH
Confidence 44455555555555554311 1111 1133455555555543321 223334455555555543321 11
Q ss_pred chhhhc-----CCCCCcEEEccCCCCCc-----cCcccCCCCCCCEEEccCCCCCcc-----chh-hcCCCCCCEEEccC
Q 001142 156 LLSEIA-----GLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKYL-----PTE-ICYLKALISLKVAN 219 (1142)
Q Consensus 156 lp~~l~-----~L~~L~~L~Ls~N~L~~-----IP~~l~~L~~L~~L~Ls~N~L~~l-----P~~-l~~L~~L~~L~Ls~ 219 (1142)
.+..+. .+++|+.|++++|.++. +|..+..+++|+.|+|++|.|+.. ... +..+++|+.|+|++
T Consensus 186 ~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~ 265 (461)
T 1z7x_W 186 GVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWE 265 (461)
T ss_dssp HHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTT
T ss_pred HHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcC
Confidence 111111 23345555555555543 344444455555555555555421 111 12345555555555
Q ss_pred CCCCc-----cCccccCCCCCCEEeCcCCcCCCCCcccccC-----CCCCCEEEccCCCCCC
Q 001142 220 NKLVE-----LPSGLYLLQRLENLDLSNNRLTSLGSLDLCL-----MHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 220 N~Ls~-----IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~-----L~~L~~L~Ls~N~L~~ 271 (1142)
|.|+. +|..+..+++|+.|+|++|.|+...+..+.. .++|+.|+|++|.+++
T Consensus 266 n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 327 (461)
T 1z7x_W 266 CGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTA 327 (461)
T ss_dssp SCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBG
T ss_pred CCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCch
Confidence 55553 4444444555555555555554333222221 1355555555555543
No 348
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1e-19 Score=204.06 Aligned_cols=191 Identities=24% Similarity=0.226 Sum_probs=168.2
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001142 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n 147 (1142)
..+..+.+..+.++.+. .+..+++|+.|++++|.|+.+|. +..+++|+.|+|++|.+..++. +..+++|++|++++|
T Consensus 24 ~~~~~~~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHHHHTTCSCTTSEE-CHHHHHTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS
T ss_pred HHHHHHHhcCCCccccc-chhhcCcccEEEccCCCcccChh-HhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCC
Confidence 34555667777777652 34678899999999999999964 8899999999999999888877 999999999999997
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001142 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1142)
Q Consensus 148 ~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1142)
.+.. +| .+..+++|+.|+|++|+|+.+ +.+..+++|+.|+|++|+|+.+ ..+..+++|+.|+|++|+|+.++.
T Consensus 101 ~l~~----~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 101 KVKD----LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CCCC----GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred cCCC----Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh
Confidence 7644 33 489999999999999999988 4688999999999999999988 679999999999999999998876
Q ss_pred cccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 228 GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 228 ~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+..+++|+.|+|++|+|++++ .+..+++|+.|+|++|+++.
T Consensus 174 -l~~l~~L~~L~L~~N~i~~l~--~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEEEEEEEC
T ss_pred -hcCCCccCEEECCCCcCCCCh--hhccCCCCCEEECcCCcccC
Confidence 899999999999999999974 48999999999999999986
No 349
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=9.3e-20 Score=224.58 Aligned_cols=172 Identities=20% Similarity=0.231 Sum_probs=95.6
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001142 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n 147 (1142)
++|+.|+|++|.|+.+| .|..|++|+.|+|++|.|+.+|. +.+|++|+.|+|++|.+..++ .+..+++|+.|+|++|
T Consensus 43 ~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N 119 (605)
T 1m9s_A 43 NSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENKIKDLS-SLKDLKKLKSLSLEHN 119 (605)
T ss_dssp TTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSCCCCCT-TSTTCTTCCEEECTTS
T ss_pred CCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCCCCCCh-hhccCCCCCEEEecCC
Confidence 45555555555555554 35555555555555555555544 555555555555555544333 3444444444444443
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001142 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1142)
Q Consensus 148 ~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1142)
.+... ..+..|++|+.|+|++|.|+.+ ..+..|++|+.|+|++|+|+.++. +..+++|+.|+|++|+|+.+|
T Consensus 120 ~l~~l-----~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~i~~l~- 191 (605)
T 1m9s_A 120 GISDI-----NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDLR- 191 (605)
T ss_dssp CCCCC-----GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBCG-
T ss_pred CCCCC-----ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCchh-hccCCCCCEEECcCCCCCCCh-
Confidence 33221 2345566666666666666655 445666666666666666665544 666666666666666666654
Q ss_pred cccCCCCCCEEeCcCCcCCCCCc
Q 001142 228 GLYLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 228 ~l~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
.+..|++|+.|+|++|+|++.+.
T Consensus 192 ~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 192 ALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp GGTTCTTCSEEECCSEEEECCCC
T ss_pred HHccCCCCCEEEccCCcCcCCcc
Confidence 45666666666666666665543
No 350
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=3.3e-19 Score=191.77 Aligned_cols=123 Identities=19% Similarity=0.217 Sum_probs=104.1
Q ss_pred hcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCcc-CccccCCCCCC
Q 001142 160 IAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVEL-PSGLYLLQRLE 236 (1142)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L~ 236 (1142)
|..+++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+| ..|..+++|+.|+|++|+|+.+ |..+..+++|+
T Consensus 53 ~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (220)
T 2v70_A 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR 132 (220)
T ss_dssp GGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS
T ss_pred hccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC
Confidence 4456667777777788876655 6888899999999999999775 4588899999999999999976 67788899999
Q ss_pred EEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhcc
Q 001142 237 NLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCN 282 (1142)
Q Consensus 237 ~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~ 282 (1142)
.|+|++|+|++++|..|..+++|+.|+|++|+|.|.|++.....|.
T Consensus 133 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l~~~~ 178 (220)
T 2v70_A 133 LLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWL 178 (220)
T ss_dssp EEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHHHHHHH
T ss_pred EEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchHHHHHHH
Confidence 9999999999999999999999999999999999988765544443
No 351
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.79 E-value=2.8e-20 Score=211.29 Aligned_cols=231 Identities=16% Similarity=0.123 Sum_probs=188.8
Q ss_pred CCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCC-CcccccCCCCCCCccEEEeecCCCC-ccCccccCCcCCc
Q 001142 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFP-LIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLR 94 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~-~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~L~ 94 (1142)
+.+..+.+..|.|....+. +..+++|++|+|++|.+++. ++..+..+ ++|++|+|++|.++ .+|..|..+++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~---~~L~~L~L~~~~l~~~~~~~l~~~~~L~ 145 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQC---SKLQNLSLEGLRLSDPIVNTLAKNSNLV 145 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTB---CCCSEEECTTCBCCHHHHHHHTTCTTCS
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhC---CCCCEEeCcCcccCHHHHHHHhcCCCCC
Confidence 4688899999999998766 55799999999999999875 66666544 99999999999998 5688899999999
Q ss_pred EEEccCC-CCC--cCchhhcCCCCCCEEEccCC-CCCC--CcccccCCC-CCCEEECCCCCCCCCcccchhhhcCCCCCc
Q 001142 95 NLKFFGN-EIN--LFPSEVGNLLGLECLQIKIS-SPGV--NGFALNKLK-GLKELELSKVPPRPSVLTLLSEIAGLKCLT 167 (1142)
Q Consensus 95 ~L~Ls~N-~L~--~lP~~l~~L~~L~~L~Ls~N-~l~~--~~~~~~~L~-~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~ 167 (1142)
+|+|++| .++ .+|..+.++++|+.|+|++| .++. ++..+..++ +|++|++++|.+.-....+|..+.++++|+
T Consensus 146 ~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~ 225 (336)
T 2ast_B 146 RLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLV 225 (336)
T ss_dssp EEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCS
T ss_pred EEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCC
Confidence 9999999 788 47888999999999999999 7764 456788899 999999999632112256677888999999
Q ss_pred EEEccCCC-CC-ccCcccCCCCCCCEEEccCCC-CC-ccchhhcCCCCCCEEEccCCCCCccCc-cccCC-CCCCEEeCc
Q 001142 168 KLSVCHFS-IR-YLPPEIGCLSNLEQLDLSFNK-MK-YLPTEICYLKALISLKVANNKLVELPS-GLYLL-QRLENLDLS 241 (1142)
Q Consensus 168 ~L~Ls~N~-L~-~IP~~l~~L~~L~~L~Ls~N~-L~-~lP~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L-~~L~~L~Ls 241 (1142)
.|++++|. ++ ..+..+..+++|+.|+|++|. +. .....+..+++|+.|+|++| + |. .+..+ .+|..|+++
T Consensus 226 ~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i---~~~~~~~l~~~l~~L~l~ 301 (336)
T 2ast_B 226 HLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-V---PDGTLQLLKEALPHLQIN 301 (336)
T ss_dssp EEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-S---CTTCHHHHHHHSTTSEES
T ss_pred EEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-c---CHHHHHHHHhhCcceEEe
Confidence 99999999 66 667788999999999999996 33 11236888999999999999 4 33 22233 236677799
Q ss_pred CCcCCCCCcccccC
Q 001142 242 NNRLTSLGSLDLCL 255 (1142)
Q Consensus 242 ~N~Ls~~~p~~l~~ 255 (1142)
+|+|++..|..+++
T Consensus 302 ~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 302 CSHFTTIARPTIGN 315 (336)
T ss_dssp CCCSCCTTCSSCSS
T ss_pred cccCccccCCcccc
Confidence 99999999977654
No 352
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.79 E-value=9.9e-20 Score=203.64 Aligned_cols=151 Identities=17% Similarity=0.174 Sum_probs=112.2
Q ss_pred cceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCCh----HH------HHHhHHhHHHHHHHHhhCCCCCccceee
Q 001142 809 LSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSA----DE------IRNFEYSCLGEVRMLGALRHSCIVEMYG 877 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~----~~------~~~~~~~~~~Ei~iL~~L~HpNIVkl~g 877 (1142)
|.+.+.||+|+||.||+|.+ .+..+|+|+.+........ .. .......+.+|+.++++++ | +++++
T Consensus 92 ~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~ 168 (282)
T 1zar_A 92 DAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPK 168 (282)
T ss_dssp SEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCC
T ss_pred EEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCe
Confidence 57789999999999999998 4678899986533211100 00 0011234589999999999 4 66666
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCC
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 957 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp 957 (1142)
++.. + ..++||||++|++|.+ +. . .....++.||+.||.|||++||+||||||
T Consensus 169 ~~~~-~--------------~~~lvmE~~~g~~L~~-l~---------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp 221 (282)
T 1zar_A 169 VYAW-E--------------GNAVLMELIDAKELYR-VR---------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQ 221 (282)
T ss_dssp EEEE-E--------------TTEEEEECCCCEEGGG-CC---------C--SCHHHHHHHHHHHHHHHHHTTEECSCCST
T ss_pred EEec-c--------------ceEEEEEecCCCcHHH-cc---------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCH
Confidence 5543 2 2299999999999987 31 1 23457999999999999999999999999
Q ss_pred CCeeeccccccCCCCCeEEEeecCCcccccccccccccccCCCCCCCCccCCCcccchhhhcc
Q 001142 958 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA 1020 (1142)
Q Consensus 958 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 1020 (1142)
+|||++ + +.+||+|||+|+. +..|+|||++..
T Consensus 222 ~NILl~-~-------~~vkl~DFG~a~~-----------------------~~~~~a~e~l~r 253 (282)
T 1zar_A 222 YNVLVS-E-------EGIWIIDFPQSVE-----------------------VGEEGWREILER 253 (282)
T ss_dssp TSEEEE-T-------TEEEECCCTTCEE-----------------------TTSTTHHHHHHH
T ss_pred HHEEEE-C-------CcEEEEECCCCeE-----------------------CCCCCHHHHHHH
Confidence 999999 6 7899999999852 344789999764
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=3.7e-19 Score=219.27 Aligned_cols=189 Identities=20% Similarity=0.172 Sum_probs=163.0
Q ss_pred ccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCC
Q 001142 22 LPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGN 101 (1142)
Q Consensus 22 L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N 101 (1142)
+.+..+.+..+. .+..+++|+.|+|++|.|+... .+ ..|++|+.|+|++|.|+.+|+ |..|++|+.|+|++|
T Consensus 26 l~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~~l~--~l---~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N 97 (605)
T 1m9s_A 26 DNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSVQ--GI---QYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDEN 97 (605)
T ss_dssp HHTTCSCTTSEE--CHHHHTTCCCCBCTTCCCCCCT--TG---GGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSS
T ss_pred HhccCCCccccc--chhcCCCCCEEECcCCCCCCCh--HH---ccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCC
Confidence 344455555543 4678899999999999998753 24 455999999999999999977 899999999999999
Q ss_pred CCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc
Q 001142 102 EINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP 181 (1142)
Q Consensus 102 ~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~ 181 (1142)
.|+.+| .+.+|++|+.|+|++|.+..++ .+..|++|+.|+|++|.+... ..+..|++|+.|+|++|.|+.+++
T Consensus 98 ~l~~l~-~l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l-----~~l~~l~~L~~L~Ls~N~l~~~~~ 170 (605)
T 1m9s_A 98 KIKDLS-SLKDLKKLKSLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI-----TVLSRLTKLDTLSLEDNQISDIVP 170 (605)
T ss_dssp CCCCCT-TSTTCTTCCEEECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC-----GGGGSCTTCSEEECCSSCCCCCGG
T ss_pred CCCCCh-hhccCCCCCEEEecCCCCCCCc-cccCCCccCEEECCCCccCCc-----hhhcccCCCCEEECcCCcCCCchh
Confidence 999887 6899999999999999988764 588999999999999877554 468899999999999999998866
Q ss_pred ccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001142 182 EIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1142)
Q Consensus 182 ~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1142)
+..+++|+.|+|++|+|+.+| .+..|++|+.|+|++|.|+..|.
T Consensus 171 -l~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 171 -LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp -GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEECCSEEEECCCC
T ss_pred -hccCCCCCEEECcCCCCCCCh-HHccCCCCCEEEccCCcCcCCcc
Confidence 899999999999999999985 68999999999999999987664
No 354
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.78 E-value=8.7e-19 Score=188.49 Aligned_cols=123 Identities=24% Similarity=0.282 Sum_probs=102.8
Q ss_pred hhcCCCCCcEEEccCCCCCcc-CcccCCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCcc-CccccCCCCC
Q 001142 159 EIAGLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVEL-PSGLYLLQRL 235 (1142)
Q Consensus 159 ~l~~L~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~Ls~I-P~~l~~L~~L 235 (1142)
.|..+++|+.|+|++|+|+.+ |..|..+++|++|+|++|+|+.+|.. |..+++|+.|+|++|+|+.+ |..+..+++|
T Consensus 51 ~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 130 (220)
T 2v9t_B 51 AFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNL 130 (220)
T ss_dssp SSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred HhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCC
Confidence 345566677777777777765 66788888899999999999988765 57789999999999999876 5677889999
Q ss_pred CEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhc
Q 001142 236 ENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICC 281 (1142)
Q Consensus 236 ~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~ 281 (1142)
+.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|++.+...|
T Consensus 131 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~l~~l~~~ 176 (220)
T 2v9t_B 131 NLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICDCHLKWLADY 176 (220)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHH
T ss_pred CEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCCCccHHHHHH
Confidence 9999999999999998899999999999999999999887655544
No 355
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.78 E-value=2e-18 Score=186.66 Aligned_cols=116 Identities=29% Similarity=0.342 Sum_probs=97.3
Q ss_pred hhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCccCccccCCCCCC
Q 001142 159 EIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGLYLLQRLE 236 (1142)
Q Consensus 159 ~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~ 236 (1142)
.|.++++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+|.. |..+++|+.|+|++|+|+.||..+..+++|+
T Consensus 59 ~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~ 138 (229)
T 3e6j_A 59 VFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLT 138 (229)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCS
T ss_pred HhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCC
Confidence 44556667777777777777765 457888889999999988887654 6788999999999999999998898899999
Q ss_pred EEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCC
Q 001142 237 NLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1142)
Q Consensus 237 ~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1142)
.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|+
T Consensus 139 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 139 HLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred EEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 99999999999988888999999999999999998664
No 356
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=1.5e-21 Score=238.92 Aligned_cols=195 Identities=23% Similarity=0.218 Sum_probs=148.9
Q ss_pred CCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCC-------------CC-cCchhhcCCCCCCEEE-
Q 001142 56 PLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNE-------------IN-LFPSEVGNLLGLECLQ- 120 (1142)
Q Consensus 56 ~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~-------------L~-~lP~~l~~L~~L~~L~- 120 (1142)
....++.++..+++|+.|+|++|.|+.||.+|++|++|+.|++++|. +. .+|..+++|++|+.|+
T Consensus 337 ~~~~~~~d~~~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~ 416 (567)
T 1dce_A 337 RPECWCRDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDP 416 (567)
T ss_dssp CSEEEEECCSTTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCG
T ss_pred CchhhhcccccCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcc
Confidence 33445544556688888999999888888888888889999887764 22 3455556666666665
Q ss_pred ccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCC
Q 001142 121 IKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMK 200 (1142)
Q Consensus 121 Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~ 200 (1142)
++.|. +.+|..+.+++| .+..+|. ..|+.|+|++|.|+.+|. |+.+++|+.|+|++|+|+
T Consensus 417 l~~n~----------~~~L~~l~l~~n----~i~~l~~-----~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~ 476 (567)
T 1dce_A 417 MRAAY----------LDDLRSKFLLEN----SVLKMEY-----ADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR 476 (567)
T ss_dssp GGHHH----------HHHHHHHHHHHH----HHHHHHH-----TTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC
T ss_pred hhhcc----------cchhhhhhhhcc----cccccCc-----cCceEEEecCCCCCCCcC-ccccccCcEeecCccccc
Confidence 44332 122333333331 1222222 248889999999999987 889999999999999999
Q ss_pred ccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCC-cccccCCCCCCEEEccCCCCCC
Q 001142 201 YLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLG-SLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 201 ~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~-p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
.||..|+.+++|+.|+|++|+|+.|| .++.|++|+.|+|++|+|++++ |..|..|++|+.|+|++|+|++
T Consensus 477 ~lp~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 477 ALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccchhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 99999999999999999999999988 8889999999999999999987 7789999999999999999987
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=8.3e-19 Score=193.91 Aligned_cols=168 Identities=22% Similarity=0.191 Sum_probs=115.1
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001142 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n 147 (1142)
.+++.|+|++|.++.++ .+..+++|++|+|++|.|+.+| .+..+++|+.|+|++|.+..++.
T Consensus 19 ~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~---------------- 80 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP---------------- 80 (263)
T ss_dssp HHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG----------------
T ss_pred HHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh----------------
Confidence 45666677777777665 4666677777777777777666 56666666666666665444332
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001142 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1142)
Q Consensus 148 ~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1142)
+..+++|+.|+|++|+|+.+|.... ++|+.|+|++|+|+.+| .+..+++|+.|+|++|+|+.+|
T Consensus 81 ------------l~~l~~L~~L~L~~N~l~~l~~~~~--~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~~- 144 (263)
T 1xeu_A 81 ------------LKDLTKLEELSVNRNRLKNLNGIPS--ACLSRLFLDNNELRDTD-SLIHLKNLEILSIRNNKLKSIV- 144 (263)
T ss_dssp ------------GTTCSSCCEEECCSSCCSCCTTCCC--SSCCEEECCSSCCSBSG-GGTTCTTCCEEECTTSCCCBCG-
T ss_pred ------------hccCCCCCEEECCCCccCCcCcccc--CcccEEEccCCccCCCh-hhcCcccccEEECCCCcCCCCh-
Confidence 5556666677777777776655323 67777777777777765 4777777777777777777775
Q ss_pred cccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 228 GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 228 ~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
.+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++
T Consensus 145 ~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 145 MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 566777777777777777776 357777777777777777766
No 358
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.77 E-value=2.4e-18 Score=182.53 Aligned_cols=102 Identities=26% Similarity=0.352 Sum_probs=45.6
Q ss_pred CCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEe
Q 001142 163 LKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSG-LYLLQRLENLD 239 (1142)
Q Consensus 163 L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~L~ 239 (1142)
+++|++|+|++|+|+.+|.. |..+++|++|+|++|+|+.+|.. +..+++|+.|+|++|+|+.+|.. +..+++|+.|+
T Consensus 75 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 154 (208)
T 2o6s_A 75 LTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 154 (208)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEE
Confidence 33444444444444443332 34444444444444444444322 34444455555555554444333 33344555555
Q ss_pred CcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 240 LSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 240 Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
|++|.+.+ .+++|++|+++.|.+++
T Consensus 155 l~~N~~~~-------~~~~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 155 LHDNPWDC-------TCPGIRYLSEWINKHSG 179 (208)
T ss_dssp CCSCCBCC-------CTTTTHHHHHHHHHCTT
T ss_pred ecCCCeec-------CCCCHHHHHHHHHhCCc
Confidence 55554332 22344455555555544
No 359
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=4.2e-19 Score=196.33 Aligned_cols=173 Identities=18% Similarity=0.221 Sum_probs=134.9
Q ss_pred CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCE
Q 001142 39 DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLEC 118 (1142)
Q Consensus 39 ~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~ 118 (1142)
++.++..|+|+.|.++... .+.. +++|+.|+|++|.|+.+| .+..+++|++|+|++|+|+.+|. +.++++|+.
T Consensus 17 ~l~~l~~l~l~~~~i~~~~--~~~~---l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~ 89 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTDLV--SQKE---LSGVQNFNGDNSNIQSLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEE 89 (263)
T ss_dssp HHHHHHHHHHTCSCTTSEE--CHHH---HTTCSEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCE
T ss_pred HHHHHHHHHhcCCCccccc--chhh---cCcCcEEECcCCCcccch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCE
Confidence 4566788899999998755 3444 489999999999999998 78999999999999999999988 999999999
Q ss_pred EEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCC
Q 001142 119 LQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNK 198 (1142)
Q Consensus 119 L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~ 198 (1142)
|+|++|.+..++... . ++|+.|+|++|+|+.+| .+..+++|+.|+|++|+
T Consensus 90 L~L~~N~l~~l~~~~----------------------------~-~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~ 139 (263)
T 1xeu_A 90 LSVNRNRLKNLNGIP----------------------------S-ACLSRLFLDNNELRDTD-SLIHLKNLEILSIRNNK 139 (263)
T ss_dssp EECCSSCCSCCTTCC----------------------------C-SSCCEEECCSSCCSBSG-GGTTCTTCCEEECTTSC
T ss_pred EECCCCccCCcCccc----------------------------c-CcccEEEccCCccCCCh-hhcCcccccEEECCCCc
Confidence 999999866554211 1 45667777777777664 46777777777777777
Q ss_pred CCccchhhcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCc
Q 001142 199 MKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 199 L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
|+.+| .+..+++|+.|+|++|+|+.+ ..+..+++|+.|+|++|.+++.+.
T Consensus 140 i~~~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~~~~ 189 (263)
T 1xeu_A 140 LKSIV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVNEPV 189 (263)
T ss_dssp CCBCG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEECCCE
T ss_pred CCCCh-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccCCcc
Confidence 77775 577777777777777777766 566777777777777777776644
No 360
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.75 E-value=5.9e-18 Score=179.54 Aligned_cols=177 Identities=17% Similarity=0.158 Sum_probs=113.6
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcCchh-hcCCCCCCEEEc
Q 001142 44 SVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPSE-VGNLLGLECLQI 121 (1142)
Q Consensus 44 ~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~L 121 (1142)
+.++++++.++..+... .++|++|+|++|.|+.+|. .|..+++|++|+|++|+|+.+|.. |.++++|++|+|
T Consensus 10 ~~v~c~~~~l~~~p~~~------~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI------PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNL 83 (208)
T ss_dssp TEEECCSSCCSSCCSCC------CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CEEEecCCCccCCCCCC------CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEEC
Confidence 35566666655443221 1456666666666665544 345566666666666666655443 345555555555
Q ss_pred cCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCCCC
Q 001142 122 KISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMK 200 (1142)
Q Consensus 122 s~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~ 200 (1142)
++|.+..++ +..|..+++|+.|+|++|+|+.+|.. |..+++|+.|+|++|+|+
T Consensus 84 s~n~l~~~~--------------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 137 (208)
T 2o6s_A 84 STNQLQSLP--------------------------NGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137 (208)
T ss_dssp CSSCCCCCC--------------------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCCccC--------------------------HhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc
Confidence 555433222 22356677777777888887776654 577888888888888888
Q ss_pred ccchh-hcCCCCCCEEEccCCCCCccCccccCCCCCCEEeCcCCcCCCCCcccccCCCC
Q 001142 201 YLPTE-ICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHN 258 (1142)
Q Consensus 201 ~lP~~-l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~ 258 (1142)
.+|.. +..+++|+.|+|++|.+. ..+++|+.|+++.|+++|.+|.+++.++.
T Consensus 138 ~~~~~~~~~l~~L~~L~l~~N~~~------~~~~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 138 SVPDGVFDRLTSLQYIWLHDNPWD------CTCPGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CCCTTTTTTCTTCCEEECCSCCBC------CCTTTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred eeCHHHhccCCCccEEEecCCCee------cCCCCHHHHHHHHHhCCceeeccCccccC
Confidence 77654 677888888888888665 23457888888888888888877776654
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=2e-17 Score=178.90 Aligned_cols=153 Identities=22% Similarity=0.247 Sum_probs=112.9
Q ss_pred ccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001142 70 VEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1142)
Q Consensus 70 L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~ 148 (1142)
.+.+++++|.++.||..+. ++|++|+|++|+|+.+ |..|.++++|+.|+|++|.++.++
T Consensus 21 ~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~------------------ 80 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP------------------ 80 (229)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------------------
T ss_pred CCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC------------------
Confidence 4566677777777766554 4677777777777655 444666666666666666543332
Q ss_pred CCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc
Q 001142 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1142)
Q Consensus 149 ~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1142)
+..|..+++|+.|+|++|+|+.+|.. |..+++|+.|+|++|+|+.||..+..+++|+.|+|++|+|+.+|.
T Consensus 81 --------~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 81 --------VGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp --------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred --------hhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCH
Confidence 12345677788888888888877664 578889999999999999999888889999999999999998875
Q ss_pred -cccCCCCCCEEeCcCCcCCCCCc
Q 001142 228 -GLYLLQRLENLDLSNNRLTSLGS 250 (1142)
Q Consensus 228 -~l~~L~~L~~L~Ls~N~Ls~~~p 250 (1142)
.+..+++|+.|+|++|.+++..+
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTTBG
T ss_pred HHHhCCCCCCEEEeeCCCccCCcc
Confidence 46678999999999999887654
No 362
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=5.2e-19 Score=222.64 Aligned_cols=178 Identities=16% Similarity=0.051 Sum_probs=77.2
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCC--CccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCE
Q 001142 41 DDDSVIDVSGKTVDFPLIESYGNRGGDN--SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLEC 118 (1142)
Q Consensus 41 ~~L~~LdLs~N~L~~~~p~~~~~l~~L~--~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~ 118 (1142)
+.++.|+|++|.+.......+..+ .|. +|..++++.|.+...|..|..+++|+.|+|++|.|..||..++++++|++
T Consensus 173 ~~~~~l~L~~n~~~~~~~~~l~~l-~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~ 251 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQALLQHK-KLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTR 251 (727)
T ss_dssp --------------------------------------------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSC
T ss_pred CccceEEeeCCCCCcchhhHhhcC-ccCcccccCccccccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCE
Confidence 457778888887776432221111 111 12333444455554456677777777788887777777777777777777
Q ss_pred EEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCC
Q 001142 119 LQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNK 198 (1142)
Q Consensus 119 L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~ 198 (1142)
|+|++|.+..+|..+..|++|++|+|++|.+. .+|..|++|++|+.|+|++|.|+.||..|+.|++|+.|+|++|.
T Consensus 252 L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~----~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 252 LYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT----SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp CBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS----SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSC
T ss_pred EEeeCCcCcccChhhhCCCCCCEEeCcCCcCC----ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCc
Confidence 77777766666655555555555555554332 34555555555555555555555555555555555555555555
Q ss_pred CC-ccchhhcCCC-CCCEEEccCCCCC
Q 001142 199 MK-YLPTEICYLK-ALISLKVANNKLV 223 (1142)
Q Consensus 199 L~-~lP~~l~~L~-~L~~L~Ls~N~Ls 223 (1142)
|+ .+|..+..+. .+..|+|++|.++
T Consensus 328 l~~~~p~~~~~~~~~~~~l~l~~N~l~ 354 (727)
T 4b8c_D 328 LEKQFLKILTEKSVTGLIFYLRDNRPE 354 (727)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCC
T ss_pred cCCCChHHHhhcchhhhHHhhccCccc
Confidence 55 3344443321 1123455555554
No 363
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=9.6e-18 Score=176.75 Aligned_cols=152 Identities=16% Similarity=0.207 Sum_probs=102.7
Q ss_pred cCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc
Q 001142 88 GRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT 167 (1142)
Q Consensus 88 ~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~ 167 (1142)
..+++|+.|+|++|.|+.+| .+..+++|+.|++++|.+... ..+..+++|+
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~----------------------------~~l~~l~~L~ 91 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNY----------------------------NPISGLSNLE 91 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCC----------------------------GGGTTCTTCC
T ss_pred hhcCCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcc----------------------------hhhhcCCCCC
Confidence 44555666666666666555 455555555555555432211 2355566777
Q ss_pred EEEccCCCCCc-cCcccCCCCCCCEEEccCCCCC-ccchhhcCCCCCCEEEccCCC-CCccCccccCCCCCCEEeCcCCc
Q 001142 168 KLSVCHFSIRY-LPPEIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNK-LVELPSGLYLLQRLENLDLSNNR 244 (1142)
Q Consensus 168 ~L~Ls~N~L~~-IP~~l~~L~~L~~L~Ls~N~L~-~lP~~l~~L~~L~~L~Ls~N~-Ls~IP~~l~~L~~L~~L~Ls~N~ 244 (1142)
.|++++|.++. .|..++.+++|++|+|++|+|+ ..|..+..+++|+.|+|++|. ++.+| .+..+++|+.|+|++|+
T Consensus 92 ~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~ 170 (197)
T 4ezg_A 92 RLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDG 170 (197)
T ss_dssp EEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBC
T ss_pred EEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCC
Confidence 77777777773 5667777888888888888887 456777788888888888887 77776 57778888888888888
Q ss_pred CCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 245 LTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 245 Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
|++++ .+..+++|+.|++++|++..
T Consensus 171 i~~~~--~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 171 VHDYR--GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp CCCCT--TGGGCSSCCEEEECBC----
T ss_pred CcChH--HhccCCCCCEEEeeCcccCC
Confidence 88765 57778888888888887653
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=5.6e-20 Score=225.06 Aligned_cols=203 Identities=18% Similarity=0.180 Sum_probs=159.0
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC-------------CC-ccCccccCCcCCcEEE-ccCC
Q 001142 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV-------------LN-LIPKSVGRYEKLRNLK-FFGN 101 (1142)
Q Consensus 37 f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~-------------Lt-~iP~~l~~L~~L~~L~-Ls~N 101 (1142)
+..+++|+.|+|++|+|+ .+|+.++.+ ++|+.|++++|. +. .+|..++.|++|+.|+ ++.|
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l---~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n 420 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESC---KELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA 420 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHH---HHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHH---HHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhc
Confidence 367899999999999997 567777666 899999997774 33 5577889999999999 7877
Q ss_pred CCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc
Q 001142 102 EINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP 181 (1142)
Q Consensus 102 ~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~ 181 (1142)
.+..++. +.++.|.+..++. ..|+.|+|++|.+.. +|. |+.|++|+.|+|++|.|+.||.
T Consensus 421 ~~~~L~~----------l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~----lp~-~~~l~~L~~L~Ls~N~l~~lp~ 480 (567)
T 1dce_A 421 YLDDLRS----------KFLLENSVLKMEY-----ADVRVLHLAHKDLTV----LCH-LEQLLLVTHLDLSHNRLRALPP 480 (567)
T ss_dssp HHHHHHH----------HHHHHHHHHHHHH-----TTCSEEECTTSCCSS----CCC-GGGGTTCCEEECCSSCCCCCCG
T ss_pred ccchhhh----------hhhhcccccccCc-----cCceEEEecCCCCCC----CcC-ccccccCcEeecCcccccccch
Confidence 6654443 2233333222221 136677777754432 454 7888899999999999999999
Q ss_pred ccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCcc--CccccCCCCCCEEeCcCCcCCCCCccc---ccCC
Q 001142 182 EIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL--PSGLYLLQRLENLDLSNNRLTSLGSLD---LCLM 256 (1142)
Q Consensus 182 ~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~I--P~~l~~L~~L~~L~Ls~N~Ls~~~p~~---l~~L 256 (1142)
.|+.+++|+.|+|++|+|+.|| .|+.+++|+.|+|++|+|+.+ |..++.|++|+.|+|++|+|++.+|.. +..+
T Consensus 481 ~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~l 559 (567)
T 1dce_A 481 ALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 559 (567)
T ss_dssp GGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHC
T ss_pred hhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHC
Confidence 9999999999999999999998 899999999999999999977 889999999999999999999987732 3348
Q ss_pred CCCCEEEc
Q 001142 257 HNLQNLNL 264 (1142)
Q Consensus 257 ~~L~~L~L 264 (1142)
++|+.|++
T Consensus 560 p~L~~L~l 567 (567)
T 1dce_A 560 PSVSSILT 567 (567)
T ss_dssp TTCSEEEC
T ss_pred cccCccCC
Confidence 89998875
No 365
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.73 E-value=1.5e-17 Score=192.02 Aligned_cols=173 Identities=23% Similarity=0.232 Sum_probs=121.0
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-cc-CCcCCcEEEccCCCCCcCch-hhcCCCCCCEE
Q 001142 43 DSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VG-RYEKLRNLKFFGNEINLFPS-EVGNLLGLECL 119 (1142)
Q Consensus 43 L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~-~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L 119 (1142)
-+++++++|+|+.++.. +. ..|+.|+|++|+|+.+|.. |. ++++|++|+|++|+|+.+|. .|.++++|+.|
T Consensus 20 ~~~l~c~~~~l~~iP~~-~~-----~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 20 SNILSCSKQQLPNVPQS-LP-----SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TTEEECCSSCCSSCCSS-CC-----TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCEEEeCCCCcCccCcc-CC-----CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 35899999999875433 22 4688999999999988654 55 88999999999999998764 58888888888
Q ss_pred EccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCcc-CcccCCCCCCCEEEccCCC
Q 001142 120 QIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNK 198 (1142)
Q Consensus 120 ~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~ 198 (1142)
+|++|.+..++. ..|.++++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+
T Consensus 94 ~Ls~N~l~~~~~--------------------------~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 147 (361)
T 2xot_A 94 DLSSNHLHTLDE--------------------------FLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQ 147 (361)
T ss_dssp ECCSSCCCEECT--------------------------TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCcCCH--------------------------HHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCc
Confidence 888877554332 2345566666666666666655 4466677777777777777
Q ss_pred CCccchhh----cCCCCCCEEEccCCCCCccCc-cccCCCC--CCEEeCcCCcCCC
Q 001142 199 MKYLPTEI----CYLKALISLKVANNKLVELPS-GLYLLQR--LENLDLSNNRLTS 247 (1142)
Q Consensus 199 L~~lP~~l----~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~--L~~L~Ls~N~Ls~ 247 (1142)
|+.+|..+ ..+++|+.|+|++|+|+.+|. .+..++. |+.|+|++|.+..
T Consensus 148 l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 148 ISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 77776554 456777777777777776663 3444555 3667777777653
No 366
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.72 E-value=3.7e-17 Score=175.74 Aligned_cols=149 Identities=21% Similarity=0.259 Sum_probs=93.9
Q ss_pred cEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCC
Q 001142 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPP 149 (1142)
Q Consensus 71 ~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~ 149 (1142)
+.+++++|.|+.||..+. ++|+.|+|++|+|+.+|. .|.++++|+.|+|++|.+..
T Consensus 14 ~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~--------------------- 70 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE--------------------- 70 (220)
T ss_dssp TEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCE---------------------
T ss_pred CEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCC---------------------
Confidence 345555555555555443 355566666666655543 34444555555444443221
Q ss_pred CCCcccchhhhcCCCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCc
Q 001142 150 RPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPS 227 (1142)
Q Consensus 150 n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP~ 227 (1142)
..|..|.++++|+.|+|++|+|+.+|.. |..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|.
T Consensus 71 -----~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 71 -----LAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp -----ECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred -----cCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 1234556666677777777777777664 46777777888888877766 4667777788888888888876654
Q ss_pred -cccCCCCCCEEeCcCCcCCC
Q 001142 228 -GLYLLQRLENLDLSNNRLTS 247 (1142)
Q Consensus 228 -~l~~L~~L~~L~Ls~N~Ls~ 247 (1142)
.+..+++|+.|+|++|.+..
T Consensus 146 ~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 146 GTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTTCTTCCEEECCSSCEEC
T ss_pred HHHhCCCCCCEEEeCCCCcCC
Confidence 36667788888888887764
No 367
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=2.5e-17 Score=173.53 Aligned_cols=150 Identities=19% Similarity=0.252 Sum_probs=97.5
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001142 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n 147 (1142)
++|+.|+|++|.|+.+| .+..+++|++|+|++|.++.++ .+.++++|++|+|++|.+..
T Consensus 44 ~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~~------------------- 102 (197)
T 4ezg_A 44 NSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVTS------------------- 102 (197)
T ss_dssp HTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCBG-------------------
T ss_pred CCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccCc-------------------
Confidence 67777777777777777 5777777888888877776554 56677777777776665432
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCc-cCcccCCCCCCCEEEccCCC-CCccchhhcCCCCCCEEEccCCCCCcc
Q 001142 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY-LPPEIGCLSNLEQLDLSFNK-MKYLPTEICYLKALISLKVANNKLVEL 225 (1142)
Q Consensus 148 ~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~-IP~~l~~L~~L~~L~Ls~N~-L~~lP~~l~~L~~L~~L~Ls~N~Ls~I 225 (1142)
..|..+..+++|+.|++++|+++. .|..++.+++|++|+|++|+ ++.+| .+..+++|+.|+|++|+++.+
T Consensus 103 -------~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~ 174 (197)
T 4ezg_A 103 -------DKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY 174 (197)
T ss_dssp -------GGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC
T ss_pred -------ccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh
Confidence 122334455566666666666663 45556666677777777776 66665 566677777777777777766
Q ss_pred CccccCCCCCCEEeCcCCcCCC
Q 001142 226 PSGLYLLQRLENLDLSNNRLTS 247 (1142)
Q Consensus 226 P~~l~~L~~L~~L~Ls~N~Ls~ 247 (1142)
| .+..+++|+.|+|++|+|.+
T Consensus 175 ~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 175 R-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp T-TGGGCSSCCEEEECBC----
T ss_pred H-HhccCCCCCEEEeeCcccCC
Confidence 5 56667777777777776653
No 368
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.71 E-value=7e-17 Score=173.58 Aligned_cols=150 Identities=16% Similarity=0.194 Sum_probs=83.0
Q ss_pred EEEeecCCCCccCccccCCcCCcEEEccCCCCCcCch--hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCC
Q 001142 72 GLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPS--EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPP 149 (1142)
Q Consensus 72 ~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~--~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~ 149 (1142)
.|++++|.|+.||..+.. .+++|+|++|+|+.++. .|.++++|+.|+|++|.+..++
T Consensus 15 ~l~~s~n~l~~iP~~~~~--~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~------------------- 73 (220)
T 2v70_A 15 TVDCSNQKLNKIPEHIPQ--YTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIE------------------- 73 (220)
T ss_dssp EEECCSSCCSSCCSCCCT--TCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEEC-------------------
T ss_pred EeEeCCCCcccCccCCCC--CCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEEC-------------------
Confidence 455555555555544432 34555555555554421 2455555555555555433222
Q ss_pred CCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCcc-C
Q 001142 150 RPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-P 226 (1142)
Q Consensus 150 n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~I-P 226 (1142)
+..|.++++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |
T Consensus 74 -------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 74 -------EGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAP 146 (220)
T ss_dssp -------TTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCT
T ss_pred -------HHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECH
Confidence 1133445555555555666655544 355666666666666666655 45566666666666666666655 5
Q ss_pred ccccCCCCCCEEeCcCCcCCCCC
Q 001142 227 SGLYLLQRLENLDLSNNRLTSLG 249 (1142)
Q Consensus 227 ~~l~~L~~L~~L~Ls~N~Ls~~~ 249 (1142)
..+..+++|+.|+|++|.+++..
T Consensus 147 ~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 147 GAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp TTTTTCTTCCEEECCSCCEECSG
T ss_pred HHhcCCCCCCEEEecCcCCcCCC
Confidence 55666666666666666666543
No 369
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.70 E-value=2.4e-17 Score=181.73 Aligned_cols=142 Identities=15% Similarity=0.123 Sum_probs=103.4
Q ss_pred cceeeeecccCceEEEEEEE--CCcc--EEEEEEecccCCCChH----------------HHHHhHHhHHHHHHHHhhCC
Q 001142 809 LSSCDEAGKSVSSSLFRCKF--GSAD--AAAKVRTLKVCGSSAD----------------EIRNFEYSCLGEVRMLGALR 868 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~--~~~~--vAvKi~~l~~~~~~~~----------------~~~~~~~~~~~Ei~iL~~L~ 868 (1142)
|++.+.||+|+||.||+|.+ .+.. +|+|+.+......... ........+.+|+.++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67899999999999999998 7778 9999865432111100 00111234589999999998
Q ss_pred CCCc--cceeeeEecCCCCCCCCCCCccccceEEEEEeccCC-C----CHHHHHHHHhccCCCCCCHHHHHHHHHHHHHH
Q 001142 869 HSCI--VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKG-G----SVKNYIEKLSETGEKHVSVKLALFIAQDVAAA 941 (1142)
Q Consensus 869 HpNI--Vkl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~g-g----SL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~g 941 (1142)
|+++ ..++++ . ..+|||||+.+ | +|.++... .++..+..++.||+.|
T Consensus 129 ~~~i~~p~~~~~--~----------------~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~ 182 (258)
T 1zth_A 129 EAGVSVPQPYTY--M----------------KNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVEN 182 (258)
T ss_dssp HTTCCCCCEEEE--E----------------TTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHH
T ss_pred hCCCCCCeEEEc--C----------------CCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHH
Confidence 8764 333332 1 12899999942 3 67665422 2345678899999999
Q ss_pred HHHHH-hCCccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 942 LVELH-SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 942 L~yLH-s~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
|.||| +.||+||||||+|||++. .++|+|||+|..
T Consensus 183 l~~lH~~~givHrDlkp~NILl~~---------~~~liDFG~a~~ 218 (258)
T 1zth_A 183 VKRLYQEAELVHADLSEYNIMYID---------KVYFIDMGQAVT 218 (258)
T ss_dssp HHHHHHTSCEECSSCSTTSEEESS---------SEEECCCTTCEE
T ss_pred HHHHHHHCCEEeCCCCHHHEEEcC---------cEEEEECccccc
Confidence 99999 999999999999999974 499999999964
No 370
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=3.4e-18 Score=215.25 Aligned_cols=179 Identities=20% Similarity=0.066 Sum_probs=77.4
Q ss_pred CCccEEEeecCCCCccCccccCCcC-----CcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEE
Q 001142 68 NSVEGLYLYKNVLNLIPKSVGRYEK-----LRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKEL 142 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~-----L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L 142 (1142)
+.++.|.|.+|.+..+|..+..... +..++++.|.+...|..+..+++|+.|+|++|.+..++..+..+++|++|
T Consensus 173 ~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L 252 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRL 252 (727)
T ss_dssp -------------------------------------------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCC
T ss_pred CccceEEeeCCCCCcchhhHhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEE
Confidence 4578899988988887665433222 22333444444444555666667777777666666665555566666666
Q ss_pred ECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCC
Q 001142 143 ELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKL 222 (1142)
Q Consensus 143 ~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~L 222 (1142)
+|++|.+. .+|..|.+|++|+.|+|++|.|+.||..|+.|++|++|+|++|.|+.||..|+.|++|+.|+|++|.|
T Consensus 253 ~Ls~N~l~----~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 253 YLNGNSLT----ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp BCTTSCCS----CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCC
T ss_pred EeeCCcCc----ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCcc
Confidence 66654332 44555555666666666666666566666666666666666666666665566666666666666666
Q ss_pred C-ccCccccCCCC-CCEEeCcCCcCCCCCc
Q 001142 223 V-ELPSGLYLLQR-LENLDLSNNRLTSLGS 250 (1142)
Q Consensus 223 s-~IP~~l~~L~~-L~~L~Ls~N~Ls~~~p 250 (1142)
+ .+|..+..+.. +..|+|++|.+++.+|
T Consensus 329 ~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p 358 (727)
T 4b8c_D 329 EKQFLKILTEKSVTGLIFYLRDNRPEIPLP 358 (727)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_pred CCCChHHHhhcchhhhHHhhccCcccCcCc
Confidence 5 33444433211 1235566666665555
No 371
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.64 E-value=4.9e-17 Score=198.80 Aligned_cols=253 Identities=16% Similarity=-0.006 Sum_probs=125.6
Q ss_pred CCcccccCCCCCCcccCC----CCCCCCCCCCEEEccCCCCCCCC-----------------------cccccCCCCCCC
Q 001142 17 PIKEKLPSEANKINNEKN----GSVNDDDDDSVIDVSGKTVDFPL-----------------------IESYGNRGGDNS 69 (1142)
Q Consensus 17 ~~l~~L~~~~N~i~~l~~----~~f~~l~~L~~LdLs~N~L~~~~-----------------------p~~~~~l~~L~~ 69 (1142)
+.++.|.+..|.++.+.. ..+.++++|++|+|++|.+++.. +..+..+..+++
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~ 271 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRK 271 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTT
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhcccc
Confidence 467777777777764432 23446677777777777654411 122233444456
Q ss_pred ccEEEeecCCCCccCccccCCcCCcEEEccCCCCC--cCchhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCC
Q 001142 70 VEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEIN--LFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSK 146 (1142)
Q Consensus 70 L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~--~lP~~l~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls~ 146 (1142)
|+.|+++++....+|..+..+++|++|+|++|.++ .++..+.++++|+.|+|+++. ...++..+..+++|++|++++
T Consensus 272 L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~ 351 (592)
T 3ogk_B 272 LCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIER 351 (592)
T ss_dssp CCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEEC
T ss_pred ccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeec
Confidence 66666666555566777777778888888888775 233335667777777776221 111222334566667776662
Q ss_pred --------CCCCCCccc-chhhhcCCCCCcEEEccCCCCC-ccCcccCC-CCCCCEEEcc----CCCCCccc------hh
Q 001142 147 --------VPPRPSVLT-LLSEIAGLKCLTKLSVCHFSIR-YLPPEIGC-LSNLEQLDLS----FNKMKYLP------TE 205 (1142)
Q Consensus 147 --------n~~n~~~~~-lp~~l~~L~~L~~L~Ls~N~L~-~IP~~l~~-L~~L~~L~Ls----~N~L~~lP------~~ 205 (1142)
+..+..... ++..+..+++|+.|+++.|.++ ..+..++. +++|+.|+|+ .|+++..| ..
T Consensus 352 g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~ 431 (592)
T 3ogk_B 352 GADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSL 431 (592)
T ss_dssp CCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHH
T ss_pred CccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHH
Confidence 000111111 1222234555566666555555 22233332 5555555553 44555322 22
Q ss_pred hcCCCCCCEEEccCC--CCC-ccCccccC-CCCCCEEeCcCCcCCCC-CcccccCCCCCCEEEccCCCC
Q 001142 206 ICYLKALISLKVANN--KLV-ELPSGLYL-LQRLENLDLSNNRLTSL-GSLDLCLMHNLQNLNLQYNKL 269 (1142)
Q Consensus 206 l~~L~~L~~L~Ls~N--~Ls-~IP~~l~~-L~~L~~L~Ls~N~Ls~~-~p~~l~~L~~L~~L~Ls~N~L 269 (1142)
+..+++|+.|+|+++ .++ ..+..++. +++|+.|+|++|++++. .+..+..+++|+.|+|++|++
T Consensus 432 ~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l 500 (592)
T 3ogk_B 432 LIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCF 500 (592)
T ss_dssp HHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCC
T ss_pred HHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCC
Confidence 334455555555422 233 22222222 44455555555554431 122234444555555555544
No 372
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.64 E-value=4.3e-16 Score=163.78 Aligned_cols=136 Identities=18% Similarity=0.275 Sum_probs=113.5
Q ss_pred CEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc--cCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEE
Q 001142 140 KELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE--IGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLK 216 (1142)
Q Consensus 140 ~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~--l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~ 216 (1142)
+.|++++|.+ ..+|..+. .+|+.|+|++|+|+.+|.. |..+++|++|+|++|+|+.+ |..|..+++|+.|+
T Consensus 11 ~~l~~s~~~l----~~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 11 TTVDCTGRGL----KEIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TEEECTTSCC----SSCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CEEEcCCCCc----CcCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 4556665433 33444443 2789999999999988763 89999999999999999977 78899999999999
Q ss_pred ccCCCCCccCc-cccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhc
Q 001142 217 VANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICC 281 (1142)
Q Consensus 217 Ls~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~ 281 (1142)
|++|+|+.+|. .+..+++|+.|+|++|+|++++|..|..+++|+.|+|++|+|+|.|++.....|
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~ 150 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEW 150 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHH
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHH
Confidence 99999997755 477899999999999999999999999999999999999999998876544443
No 373
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=7.3e-16 Score=162.39 Aligned_cols=139 Identities=20% Similarity=0.240 Sum_probs=116.7
Q ss_pred CEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEcc
Q 001142 140 KELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVA 218 (1142)
Q Consensus 140 ~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls 218 (1142)
+.+++++|.+. .+|..+. ++|+.|+|++|+|+.+|..|..+++|+.|+|++|+|+.++ ..|..+++|+.|+|+
T Consensus 13 ~~l~~~~~~l~----~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls 86 (193)
T 2wfh_A 13 TVVRCSNKGLK----VLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86 (193)
T ss_dssp TEEECTTSCCS----SCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCCC----cCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECC
Confidence 34555553332 3343332 4789999999999999999999999999999999999885 579999999999999
Q ss_pred CCCCCccCc-cccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhccCC
Q 001142 219 NNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLE 284 (1142)
Q Consensus 219 ~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~ 284 (1142)
+|+|+.+|. .+..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|.+.+...|...
T Consensus 87 ~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~~~ 153 (193)
T 2wfh_A 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKS 153 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHH
T ss_pred CCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHHHh
Confidence 999998865 678899999999999999999998899999999999999999999987665555443
No 374
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=8.3e-16 Score=174.96 Aligned_cols=222 Identities=12% Similarity=0.104 Sum_probs=131.1
Q ss_pred CCCCCEEEccCCCCC--CCCcccc---------------cCCCC--------CCCccEEEeecCCCCccCc-cccCCcCC
Q 001142 40 DDDDSVIDVSGKTVD--FPLIESY---------------GNRGG--------DNSVEGLYLYKNVLNLIPK-SVGRYEKL 93 (1142)
Q Consensus 40 l~~L~~LdLs~N~L~--~~~p~~~---------------~~l~~--------L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L 93 (1142)
+++|++|||++|+|+ ......+ ..|.+ +++|+.|+|.+ .++.|++ +|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 788999999999988 1111101 11223 45666666665 4666643 45566666
Q ss_pred cEEEccCCCCCcCchh-hcCCCCCCEEEccCCC-----CCCCcccccCCCCCC-EEECCCCCC-----------------
Q 001142 94 RNLKFFGNEINLFPSE-VGNLLGLECLQIKISS-----PGVNGFALNKLKGLK-ELELSKVPP----------------- 149 (1142)
Q Consensus 94 ~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~-----l~~~~~~~~~L~~L~-~L~Ls~n~~----------------- 149 (1142)
+.|+|++|.++.|+.. |.++.+|..|.+..+. .......|..+.+|+ .+.+.....
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 6666666666555433 4444444444443311 111222333334443 222221000
Q ss_pred ----CCCcccchhhh-cCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCccc-hhhcCCCCCC-EEEccCCC
Q 001142 150 ----RPSVLTLLSEI-AGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALI-SLKVANNK 221 (1142)
Q Consensus 150 ----n~~~~~lp~~l-~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~-~L~Ls~N~ 221 (1142)
..........+ ..+++|+.|+|++|+++.||. .|.++++|+.|+|.+| ++.|+ .+|.++.+|+ .|+|.+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 00000000011 126778888888888888876 5778888888888887 77775 5577788888 888877 7
Q ss_pred CCccC-ccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEc
Q 001142 222 LVELP-SGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNL 264 (1142)
Q Consensus 222 Ls~IP-~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~L 264 (1142)
++.|+ ..|.+|++|+.|+|++|+++.+.+..|.++++|+.|+.
T Consensus 285 l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 285 VTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred ceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 77775 45556888888888888888888888888888887764
No 375
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=2.2e-15 Score=154.19 Aligned_cols=134 Identities=20% Similarity=0.128 Sum_probs=77.0
Q ss_pred CCccEEEeecCCCC--ccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECC
Q 001142 68 NSVEGLYLYKNVLN--LIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELS 145 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt--~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls 145 (1142)
++|+.|+|++|.|+ .+|..+..+++|++|+|++|.|+.+ ..+..+++|++|+|++|.+..
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~----------------- 85 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFG----------------- 85 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCS-----------------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCch-----------------
Confidence 45666666666666 6666666666666666666666655 445555555555554444222
Q ss_pred CCCCCCCcccchhhhcCCCCCcEEEccCCCCCccC--cccCCCCCCCEEEccCCCCCccch----hhcCCCCCCEEEccC
Q 001142 146 KVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLP--PEIGCLSNLEQLDLSFNKMKYLPT----EICYLKALISLKVAN 219 (1142)
Q Consensus 146 ~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP--~~l~~L~~L~~L~Ls~N~L~~lP~----~l~~L~~L~~L~Ls~ 219 (1142)
.+|..+..+++|+.|+|++|.|+.+| ..+..+++|+.|+|++|.|+.+|. .+..+++|+.|++++
T Consensus 86 ---------~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 86 ---------GLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp ---------CCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ---------HHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 12333444555666666666666554 455566666666666666665554 455566666666666
Q ss_pred CCCCccCcc
Q 001142 220 NKLVELPSG 228 (1142)
Q Consensus 220 N~Ls~IP~~ 228 (1142)
|.+..+|.+
T Consensus 157 n~~~~~~~~ 165 (168)
T 2ell_A 157 REDQEAPDS 165 (168)
T ss_dssp TTSCBCCSS
T ss_pred CChhhcccc
Confidence 666655543
No 376
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=2.1e-15 Score=154.36 Aligned_cols=132 Identities=24% Similarity=0.230 Sum_probs=106.4
Q ss_pred CCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCc-cchhhcCCCCCCEE
Q 001142 137 KGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKY-LPTEICYLKALISL 215 (1142)
Q Consensus 137 ~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~-lP~~l~~L~~L~~L 215 (1142)
++|+.|++++|.+.. +.+|..+..+++|+.|+|++|.|+.+ ..+..+++|++|+|++|+|+. +|..+..+++|+.|
T Consensus 24 ~~L~~L~l~~n~l~~--~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSND--GKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBT--TBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCCh--hhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 455666666533210 24555667778888888888888877 778888999999999999986 77777779999999
Q ss_pred EccCCCCCccC--ccccCCCCCCEEeCcCCcCCCCCc---ccccCCCCCCEEEccCCCCCC
Q 001142 216 KVANNKLVELP--SGLYLLQRLENLDLSNNRLTSLGS---LDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 216 ~Ls~N~Ls~IP--~~l~~L~~L~~L~Ls~N~Ls~~~p---~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
+|++|.|+.+| ..+..+++|+.|+|++|.|++.++ ..+..+++|+.|++++|.+..
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 99999998876 678889999999999999998877 578889999999999998876
No 377
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.58 E-value=1.6e-16 Score=194.10 Aligned_cols=246 Identities=16% Similarity=0.034 Sum_probs=152.3
Q ss_pred CcccccCCCCC-CcccCC-CCCCCCCCCCEEEccCCCCCCCC----cccccCCCCCCCccEEEeecCCCCc-----cCcc
Q 001142 18 IKEKLPSEANK-INNEKN-GSVNDDDDDSVIDVSGKTVDFPL----IESYGNRGGDNSVEGLYLYKNVLNL-----IPKS 86 (1142)
Q Consensus 18 ~l~~L~~~~N~-i~~l~~-~~f~~l~~L~~LdLs~N~L~~~~----p~~~~~l~~L~~L~~L~Ls~N~Lt~-----iP~~ 86 (1142)
.++.|.+..+. ++.... ..+.++++|++|+|++|.+++.. +..+. ++++|+.|+|++|.++. ++..
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~---~~~~L~~L~L~~n~~~~~~~~~l~~~ 215 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQ---HNTSLEVLNFYMTEFAKISPKDLETI 215 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHH---HCCCCCEEECTTCCCSSCCHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHh---cCCCccEEEeeccCCCccCHHHHHHH
Confidence 37777776655 211111 11236788888888888876653 22333 34788888888888863 3444
Q ss_pred ccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCC----CCCcccccCCCCCCEEECCCCCCCCCcccchhhhcC
Q 001142 87 VGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSP----GVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAG 162 (1142)
Q Consensus 87 l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l----~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~ 162 (1142)
+.++++|+.|+|++|.+..+|..+.++++|+.|+++.... ......+..+++|+.|+++++ ....+|..+..
T Consensus 216 ~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~----~~~~l~~~~~~ 291 (592)
T 3ogk_B 216 ARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYM----GPNEMPILFPF 291 (592)
T ss_dssp HHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTC----CTTTGGGGGGG
T ss_pred HhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCcccc----chhHHHHHHhh
Confidence 5677888888888888888887788888888888864331 122234566677777777663 23345555666
Q ss_pred CCCCcEEEccCCCCCc--cCcccCCCCCCCEEEccCCCCC--ccchhhcCCCCCCEEEcc-----------CCCCC--cc
Q 001142 163 LKCLTKLSVCHFSIRY--LPPEIGCLSNLEQLDLSFNKMK--YLPTEICYLKALISLKVA-----------NNKLV--EL 225 (1142)
Q Consensus 163 L~~L~~L~Ls~N~L~~--IP~~l~~L~~L~~L~Ls~N~L~--~lP~~l~~L~~L~~L~Ls-----------~N~Ls--~I 225 (1142)
+++|+.|+|++|.++. ++..+..+++|+.|+|+ |.+. .++..+..+++|+.|+|+ .|.++ .+
T Consensus 292 ~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~ 370 (592)
T 3ogk_B 292 AAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGL 370 (592)
T ss_dssp GGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHH
T ss_pred cCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHH
Confidence 7777777777777652 22334667777777777 4444 334444556677777777 35555 23
Q ss_pred CccccCCCCCCEEeCcCCcCCCCCcccccC-CCCCCEEEcc----CCCCCC
Q 001142 226 PSGLYLLQRLENLDLSNNRLTSLGSLDLCL-MHNLQNLNLQ----YNKLLS 271 (1142)
Q Consensus 226 P~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~-L~~L~~L~Ls----~N~L~~ 271 (1142)
+.-...+++|+.|+|+.|++++..+..+.. +++|+.|+|+ .|.+++
T Consensus 371 ~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~ 421 (592)
T 3ogk_B 371 IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITD 421 (592)
T ss_dssp HHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSS
T ss_pred HHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccC
Confidence 333334667777777777776655555544 6677777775 455554
No 378
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=4.8e-14 Score=165.40 Aligned_cols=229 Identities=10% Similarity=0.097 Sum_probs=187.7
Q ss_pred CCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEEccCCCCCc
Q 001142 27 NKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLKFFGNEINL 105 (1142)
Q Consensus 27 N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~Ls~N~L~~ 105 (1142)
|+++.|...+|.+. +|+.++|..| ++.+....|.+ .+|+.|.|.+ .++.|+ ..|.++.+|+.|+|++|+++.
T Consensus 122 ~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~----~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~ 194 (401)
T 4fdw_A 122 NSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN----STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK 194 (401)
T ss_dssp TTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT----CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE
T ss_pred CccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC----CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE
Confidence 57899999999985 7999999877 77766666654 3699999986 689996 479999999999999999999
Q ss_pred CchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccC
Q 001142 106 FPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIG 184 (1142)
Q Consensus 106 lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~ 184 (1142)
||...+..++|+.+.|..|-..+-..+|..+.+|+.|++..+ ....-..+|.+ .+|+.+.| .|.++.|+. .|.
T Consensus 195 I~~~aF~~~~L~~l~lp~~l~~I~~~aF~~~~~L~~l~l~~~----l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~ 268 (401)
T 4fdw_A 195 LPASTFVYAGIEEVLLPVTLKEIGSQAFLKTSQLKTIEIPEN----VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFY 268 (401)
T ss_dssp ECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCCEECCTT----CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTT
T ss_pred echhhEeecccCEEEeCCchheehhhHhhCCCCCCEEecCCC----ccCcccccccc-CCccEEEe-CCCccEEChhHhh
Confidence 988866689999999985533344468999999999999862 22222345666 78999999 566888855 789
Q ss_pred CCCCCCEEEccCCCCC-----ccc-hhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeCcCCcCCCCCcccccCCC
Q 001142 185 CLSNLEQLDLSFNKMK-----YLP-TEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMH 257 (1142)
Q Consensus 185 ~L~~L~~L~Ls~N~L~-----~lP-~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~ 257 (1142)
++++|+.|+|.+|.+. .|+ ..|.++++|+.|.|. |.++.|+.. |.+|++|+.|+|.+| ++.+.+..|.++
T Consensus 269 ~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~- 345 (401)
T 4fdw_A 269 YCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT- 345 (401)
T ss_dssp TCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-
T ss_pred CCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-
Confidence 9999999999998876 564 678889999999999 569988654 556899999999655 888888899999
Q ss_pred CCCEEEccCCCCCC
Q 001142 258 NLQNLNLQYNKLLS 271 (1142)
Q Consensus 258 ~L~~L~Ls~N~L~~ 271 (1142)
+|+.|++++|.+..
T Consensus 346 ~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 346 GIKEVKVEGTTPPQ 359 (401)
T ss_dssp CCCEEEECCSSCCB
T ss_pred CCCEEEEcCCCCcc
Confidence 99999999998765
No 379
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.56 E-value=1.9e-14 Score=151.51 Aligned_cols=53 Identities=21% Similarity=0.346 Sum_probs=27.7
Q ss_pred cEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCC
Q 001142 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISS 125 (1142)
Q Consensus 71 ~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~ 125 (1142)
+.+++++|.|++||..+. ++|++|+|++|+|+.+|..|.++++|+.|+|++|.
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~ 65 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNR 65 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCc
Confidence 355555555555555443 25556666666655555545444444444444443
No 380
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.56 E-value=4.6e-15 Score=171.87 Aligned_cols=150 Identities=18% Similarity=0.148 Sum_probs=100.1
Q ss_pred cceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCCh--------------HHHHHhHHhHHHHHHHHhhCCCCCcc
Q 001142 809 LSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSA--------------DEIRNFEYSCLGEVRMLGALRHSCIV 873 (1142)
Q Consensus 809 y~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~--------------~~~~~~~~~~~~Ei~iL~~L~HpNIV 873 (1142)
|++.+.||+|++|.||+|.. .+..+|+|+.+........ ...........+|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 79999999999999999987 5778999997643222110 00111112234566666666544432
Q ss_pred ceeeeEecCCCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001142 874 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHR 953 (1142)
Q Consensus 874 kl~g~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~gIvHr 953 (1142)
-..-+... ..+|||||++|++|..+. .......++.||+.+|.|||++|||||
T Consensus 177 vp~p~~~~----------------~~~LVME~i~G~~L~~l~-----------~~~~~~~l~~qll~~l~~lH~~gIVHr 229 (397)
T 4gyi_A 177 VPEPIAQS----------------RHTIVMSLVDALPMRQVS-----------SVPDPASLYADLIALILRLAKHGLIHG 229 (397)
T ss_dssp CCCEEEEE----------------TTEEEEECCSCEEGGGCC-----------CCSCHHHHHHHHHHHHHHHHHTTEECS
T ss_pred CCeeeecc----------------CceEEEEecCCccHhhhc-----------ccHHHHHHHHHHHHHHHHHHHCCCcCC
Confidence 11111111 127999999988875432 112345788999999999999999999
Q ss_pred CCCCCCeeeccccccCCCC---CeEEEeecCCccc
Q 001142 954 DIKSENILIDLERKKADGK---PVVKLCDFDRAVP 985 (1142)
Q Consensus 954 DLKp~NILld~~~~~~~~~---~~vKL~DFGlA~~ 985 (1142)
||||.|||++.++...... ..+.|+||+-+..
T Consensus 230 DLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 230 DFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence 9999999998874211111 1489999998864
No 381
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.55 E-value=6.1e-15 Score=147.76 Aligned_cols=127 Identities=25% Similarity=0.249 Sum_probs=99.4
Q ss_pred CCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCc-cchhhcCCCCCCEE
Q 001142 137 KGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKY-LPTEICYLKALISL 215 (1142)
Q Consensus 137 ~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~-lP~~l~~L~~L~~L 215 (1142)
++|+.|++++|.+.. +.+|..+..+++|+.|++++|.|+.+ ..++.+++|++|+|++|+|+. +|..+..+++|+.|
T Consensus 17 ~~l~~L~l~~n~l~~--~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNE--GKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBT--TBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCCh--hHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 456666666643210 35566667788888888888888877 667888888899999888886 77777778889999
Q ss_pred EccCCCCCccC--ccccCCCCCCEEeCcCCcCCCCCc---ccccCCCCCCEEEccC
Q 001142 216 KVANNKLVELP--SGLYLLQRLENLDLSNNRLTSLGS---LDLCLMHNLQNLNLQY 266 (1142)
Q Consensus 216 ~Ls~N~Ls~IP--~~l~~L~~L~~L~Ls~N~Ls~~~p---~~l~~L~~L~~L~Ls~ 266 (1142)
+|++|+|+.+| ..+..+++|+.|+|++|.|++.++ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999888764 778888889999999998888877 5688888888888864
No 382
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.55 E-value=6.4e-15 Score=154.75 Aligned_cols=125 Identities=22% Similarity=0.227 Sum_probs=61.2
Q ss_pred cEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchh--hcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001142 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSE--VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1142)
Q Consensus 71 ~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~--l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~ 148 (1142)
+.|++++|.|++||..+.. +|++|+|++|+|+.+|.. |.++++|+.|+|++|.+..+
T Consensus 11 ~~l~~s~~~l~~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~------------------- 69 (192)
T 1w8a_A 11 TTVDCTGRGLKEIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGI------------------- 69 (192)
T ss_dssp TEEECTTSCCSSCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCB-------------------
T ss_pred CEEEcCCCCcCcCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCc-------------------
Confidence 5666666666666665543 666666666666655442 44444444444443332211
Q ss_pred CCCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCC
Q 001142 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLV 223 (1142)
Q Consensus 149 ~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls 223 (1142)
.|..|.++++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+ |..|..+++|+.|+|++|.++
T Consensus 70 -------~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 70 -------EPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp -------CTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred -------CHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 12334444444444444444443332 244444555555555555432 344444444444444444444
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.54 E-value=1.2e-13 Score=162.15 Aligned_cols=239 Identities=8% Similarity=0.066 Sum_probs=194.1
Q ss_pred CcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001142 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1142)
Q Consensus 18 ~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1142)
.+..+.+..| |+.|...+|.+. +|+.|+|.. .++.+.+..| .++.+|+.|+|++|.++.||.......+|+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF---~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~ 209 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIF---YYCYNLKKADLSKTKITKLPASTFVYAGIEEVL 209 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTT---TTCTTCCEEECTTSCCSEECTTTTTTCCCSEEE
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHh---hCcccCCeeecCCCcceEechhhEeecccCEEE
Confidence 4777777654 999999999995 799999996 7776666655 455999999999999999987654578999999
Q ss_pred ccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCC
Q 001142 98 FFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1142)
Q Consensus 98 Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1142)
|.+ .++.|+.. |.++++|+.|+|..|-..+-..+|.. .+|+.+.+.+ +....-...|.++++|+.|.+.+|.+
T Consensus 210 lp~-~l~~I~~~aF~~~~~L~~l~l~~~l~~I~~~aF~~-~~L~~i~lp~----~i~~I~~~aF~~c~~L~~l~l~~~~~ 283 (401)
T 4fdw_A 210 LPV-TLKEIGSQAFLKTSQLKTIEIPENVSTIGQEAFRE-SGITTVKLPN----GVTNIASRAFYYCPELAEVTTYGSTF 283 (401)
T ss_dssp CCT-TCCEECTTTTTTCTTCCCEECCTTCCEECTTTTTT-CCCSEEEEET----TCCEECTTTTTTCTTCCEEEEESSCC
T ss_pred eCC-chheehhhHhhCCCCCCEEecCCCccCcccccccc-CCccEEEeCC----CccEEChhHhhCCCCCCEEEeCCccc
Confidence 984 48888655 78899999999987643334456777 8999999954 33333356789999999999999887
Q ss_pred C-----ccCc-ccCCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeCcCCcCCCC
Q 001142 177 R-----YLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSL 248 (1142)
Q Consensus 177 ~-----~IP~-~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~ 248 (1142)
. .|+. .|.++++|+.|.|. |.++.|+ ..|.++++|+.|.|..| ++.|+. .|.++ +|+.|+|++|.+..+
T Consensus 284 ~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l 360 (401)
T 4fdw_A 284 NDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQV 360 (401)
T ss_dssp CCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBC
T ss_pred cCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCccc
Confidence 6 5654 78999999999999 5699886 67888999999999655 888864 55668 999999999999999
Q ss_pred CcccccCCC-CCCEEEccCCCCCC
Q 001142 249 GSLDLCLMH-NLQNLNLQYNKLLS 271 (1142)
Q Consensus 249 ~p~~l~~L~-~L~~L~Ls~N~L~~ 271 (1142)
.+..|..++ .+..|++..|.+..
T Consensus 361 ~~~~F~~~~~~l~~l~vp~~~~~~ 384 (401)
T 4fdw_A 361 FEKVWYGFPDDITVIRVPAESVEK 384 (401)
T ss_dssp CCSSCCCSCTTCCEEEECGGGHHH
T ss_pred ccccccCCCCCccEEEeCHHHHHH
Confidence 988898885 78899998876543
No 384
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.52 E-value=7e-14 Score=144.31 Aligned_cols=110 Identities=30% Similarity=0.378 Sum_probs=98.5
Q ss_pred CCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeC
Q 001142 164 KCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSG-LYLLQRLENLDL 240 (1142)
Q Consensus 164 ~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~L~L 240 (1142)
++|+.|++++|+++.+|. .|..+++|++|+|++|+|+.+|.. +..+++|+.|+|++|+|+.+|.. +..+++|+.|+|
T Consensus 28 ~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l 107 (177)
T 2o6r_A 28 SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELAL 107 (177)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEEC
Confidence 578999999999998876 468999999999999999988754 68899999999999999988765 577999999999
Q ss_pred cCCcCCCCCcccccCCCCCCEEEccCCCCCCCC
Q 001142 241 SNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYC 273 (1142)
Q Consensus 241 s~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~ 273 (1142)
++|+|+++++..+..+++|+.|+|++|+|.+.|
T Consensus 108 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 108 DTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred cCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 999999999877899999999999999999854
No 385
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=1.6e-14 Score=149.17 Aligned_cols=103 Identities=25% Similarity=0.260 Sum_probs=43.1
Q ss_pred CcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhh-cCCCCCCEEEccCCCCCccCc--cccCCCCCCEEeCcC
Q 001142 166 LTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEI-CYLKALISLKVANNKLVELPS--GLYLLQRLENLDLSN 242 (1142)
Q Consensus 166 L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l-~~L~~L~~L~Ls~N~Ls~IP~--~l~~L~~L~~L~Ls~ 242 (1142)
|+.|+|++|.|+.+ ..+..+++|++|+|++|+|+.+|..+ ..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++
T Consensus 44 L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~ 122 (176)
T 1a9n_A 44 FDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILR 122 (176)
T ss_dssp CSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCS
T ss_pred CCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecC
Confidence 33333333333333 23334444444444444444443222 344444444444444444443 344444444444444
Q ss_pred CcCCCCCcc---cccCCCCCCEEEccCCCC
Q 001142 243 NRLTSLGSL---DLCLMHNLQNLNLQYNKL 269 (1142)
Q Consensus 243 N~Ls~~~p~---~l~~L~~L~~L~Ls~N~L 269 (1142)
|.++..++. .+..+++|+.||+++|.+
T Consensus 123 N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 123 NPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp SGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 444433321 244444444444444443
No 386
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=2.5e-14 Score=147.73 Aligned_cols=134 Identities=19% Similarity=0.175 Sum_probs=114.1
Q ss_pred hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccc-CCCC
Q 001142 109 EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEI-GCLS 187 (1142)
Q Consensus 109 ~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~~l-~~L~ 187 (1142)
.+.++.+|+.|+|++|.+..++......++|++|++++|.+... ..|..+++|+.|+|++|.|+.+|..+ ..++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~-----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL-----DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE-----CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred hcCCcCCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcc-----cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 46778899999999999887765444444999999999766532 57888999999999999999888765 8899
Q ss_pred CCCEEEccCCCCCccch--hhcCCCCCCEEEccCCCCCccCcc----ccCCCCCCEEeCcCCcCCC
Q 001142 188 NLEQLDLSFNKMKYLPT--EICYLKALISLKVANNKLVELPSG----LYLLQRLENLDLSNNRLTS 247 (1142)
Q Consensus 188 ~L~~L~Ls~N~L~~lP~--~l~~L~~L~~L~Ls~N~Ls~IP~~----l~~L~~L~~L~Ls~N~Ls~ 247 (1142)
+|++|+|++|+|+.+|. .+..+++|+.|+|++|.++.+|.. +..+++|+.||++.|.+..
T Consensus 89 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 89 DLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp TCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99999999999999987 888999999999999999999885 7889999999999998764
No 387
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.50 E-value=1.6e-15 Score=185.22 Aligned_cols=154 Identities=15% Similarity=0.042 Sum_probs=70.2
Q ss_pred CCCCCCEEEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEcc---------CCCCCcc-
Q 001142 112 NLLGLECLQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC---------HFSIRYL- 179 (1142)
Q Consensus 112 ~L~~L~~L~Ls~N~l~~~~--~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls---------~N~L~~I- 179 (1142)
.+++|+.|+|++|.++... ..+..+++|+.|++++| + ....++.....+++|+.|++. .|.++..
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~--~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~ 363 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-I--EDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQG 363 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-G--HHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-c--CHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHH
Confidence 4577777777777643211 22446677777777653 1 011122222235566666552 2333310
Q ss_pred Cccc-CCCCCCCEEEccCCCCC-ccchhhc-CCCCCCEEEcc--C----CCCCccCc------cccCCCCCCEEeCcCCc
Q 001142 180 PPEI-GCLSNLEQLDLSFNKMK-YLPTEIC-YLKALISLKVA--N----NKLVELPS------GLYLLQRLENLDLSNNR 244 (1142)
Q Consensus 180 P~~l-~~L~~L~~L~Ls~N~L~-~lP~~l~-~L~~L~~L~Ls--~----N~Ls~IP~------~l~~L~~L~~L~Ls~N~ 244 (1142)
...+ ..+++|+.|+++.|+++ ..+..+. .+++|+.|+|+ + |.++..|. -+..+++|+.|+|++ .
T Consensus 364 l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~ 442 (594)
T 2p1m_B 364 LVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-L 442 (594)
T ss_dssp HHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-S
T ss_pred HHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-c
Confidence 1111 23455555555555555 2223332 35555555555 3 34443221 123344555555544 3
Q ss_pred CCCCCcccccC-CCCCCEEEccCCCC
Q 001142 245 LTSLGSLDLCL-MHNLQNLNLQYNKL 269 (1142)
Q Consensus 245 Ls~~~p~~l~~-L~~L~~L~Ls~N~L 269 (1142)
++......+.. +++|+.|+|++|.+
T Consensus 443 l~~~~~~~l~~~~~~L~~L~L~~~~i 468 (594)
T 2p1m_B 443 LTDKVFEYIGTYAKKMEMLSVAFAGD 468 (594)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEESCCS
T ss_pred ccHHHHHHHHHhchhccEeeccCCCC
Confidence 43333323332 44555555555544
No 388
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.50 E-value=6.6e-14 Score=144.30 Aligned_cols=107 Identities=27% Similarity=0.323 Sum_probs=98.5
Q ss_pred CcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCccc-cCCCCCCEEeCcCC
Q 001142 166 LTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGL-YLLQRLENLDLSNN 243 (1142)
Q Consensus 166 L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP~~l-~~L~~L~~L~Ls~N 243 (1142)
.+.|++++|.|+.||..+. ++|++|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|... ..+++|+.|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 5689999999999998764 8999999999999988 677999999999999999999998765 68999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEccCCCCCCCCC
Q 001142 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1142)
Q Consensus 244 ~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1142)
+|+++++..|..+++|+.|+|++|+|+|.|+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999999889999999999999999999764
No 389
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.50 E-value=1.5e-13 Score=141.86 Aligned_cols=91 Identities=31% Similarity=0.362 Sum_probs=65.2
Q ss_pred hcCCCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCCCCccCccc-cCCCCCC
Q 001142 160 IAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVELPSGL-YLLQRLE 236 (1142)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~Ls~IP~~l-~~L~~L~ 236 (1142)
|..+++|+.|+|++|+|+.+|.. |..+++|++|+|++|+|+.+|. .+..+++|+.|+|++|+|+.+|..+ ..+++|+
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 127 (177)
T 2o6r_A 48 FDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQ 127 (177)
T ss_dssp TTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccC
Confidence 34455666666666766666553 5677778888888888877654 3567788888888888888777654 5578888
Q ss_pred EEeCcCCcCCCCCc
Q 001142 237 NLDLSNNRLTSLGS 250 (1142)
Q Consensus 237 ~L~Ls~N~Ls~~~p 250 (1142)
.|+|++|.+++..|
T Consensus 128 ~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 128 KIWLHTNPWDCSCP 141 (177)
T ss_dssp EEECCSSCBCCCHH
T ss_pred EEEecCCCeeccCc
Confidence 88888888887655
No 390
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.49 E-value=4.5e-14 Score=141.41 Aligned_cols=80 Identities=31% Similarity=0.271 Sum_probs=39.7
Q ss_pred CCCCCcEEEccCCCCCc-cCcccCCCCCCCEEEccCCCCCccc--hhhcCCCCCCEEEccCCCCCccCc----cccCCCC
Q 001142 162 GLKCLTKLSVCHFSIRY-LPPEIGCLSNLEQLDLSFNKMKYLP--TEICYLKALISLKVANNKLVELPS----GLYLLQR 234 (1142)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~-IP~~l~~L~~L~~L~Ls~N~L~~lP--~~l~~L~~L~~L~Ls~N~Ls~IP~----~l~~L~~ 234 (1142)
.+++|+.|++++|.++. +|..+..+++|++|+|++|+|+.+| ..+..+++|+.|+|++|.++.+|. .+..+++
T Consensus 62 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~ 141 (149)
T 2je0_A 62 KLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQ 141 (149)
T ss_dssp CCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTT
T ss_pred cCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCC
Confidence 33444444444444443 3444444555555555555555433 445555555555555555554443 3444555
Q ss_pred CCEEeCc
Q 001142 235 LENLDLS 241 (1142)
Q Consensus 235 L~~L~Ls 241 (1142)
|+.|+++
T Consensus 142 L~~L~l~ 148 (149)
T 2je0_A 142 LTYLDGY 148 (149)
T ss_dssp CCEETTB
T ss_pred cccccCC
Confidence 5555554
No 391
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.48 E-value=1.2e-13 Score=143.13 Aligned_cols=107 Identities=26% Similarity=0.346 Sum_probs=98.2
Q ss_pred CcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCCCCccCccc-cCCCCCCEEeCcCC
Q 001142 166 LTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGL-YLLQRLENLDLSNN 243 (1142)
Q Consensus 166 L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~Ls~IP~~l-~~L~~L~~L~Ls~N 243 (1142)
-+.+++++|+|+.||..+. ++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.||..+ ..+++|+.|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 3689999999999999775 8999999999999987 678999999999999999999998775 67999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEccCCCCCCCCC
Q 001142 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1142)
Q Consensus 244 ~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1142)
+|+++++..|..+++|+.|+|++|+|.+.|.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9999999789999999999999999999653
No 392
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.47 E-value=9.4e-16 Score=187.31 Aligned_cols=132 Identities=14% Similarity=0.093 Sum_probs=92.1
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecC-CCCc--cCccccCCcCCcEEEccCCCCCc-----Cchh
Q 001142 38 NDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKN-VLNL--IPKSVGRYEKLRNLKFFGNEINL-----FPSE 109 (1142)
Q Consensus 38 ~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N-~Lt~--iP~~l~~L~~L~~L~Ls~N~L~~-----lP~~ 109 (1142)
..+++|++|+|++|.+++..+..+. ..+++|++|+|++| .++. ++..+.++++|++|+|++|.++. ++.-
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~--~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~ 179 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIA--KSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHF 179 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHH--HHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGS
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHH--HhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHH
Confidence 4678999999999988876665553 12489999999988 6664 55556688899999999998763 2222
Q ss_pred hcCCCCCCEEEccCCCCCCCcc----cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCC
Q 001142 110 VGNLLGLECLQIKISSPGVNGF----ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1142)
Q Consensus 110 l~~L~~L~~L~Ls~N~l~~~~~----~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1142)
...+++|+.|+|++|....... .+..+++|++|++++| .....+|..+..+++|+.|+++.+
T Consensus 180 ~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~---~~~~~l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 180 PDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA---VPLEKLATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp CTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT---SCHHHHHHHHHHCTTCSEEECSBC
T ss_pred hhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC---CcHHHHHHHHhcCCcceEcccccc
Confidence 3367799999998886212122 2345689999999885 233346666777777777775444
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=2.1e-16 Score=166.54 Aligned_cols=110 Identities=26% Similarity=0.263 Sum_probs=79.4
Q ss_pred hhcCCCCCcEEEccCCCCCccCcccCCCCCCCEEEccCCCCCccchhhcCCCCCCEEEccCCCCCccCc--cccCCCCCC
Q 001142 159 EIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS--GLYLLQRLE 236 (1142)
Q Consensus 159 ~l~~L~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~Ls~IP~--~l~~L~~L~ 236 (1142)
.+..+++|+.|++++|.|+.+|..+..+++|++|+|++|+|+.+| .+..+++|+.|+|++|+|+.+|. .+..+++|+
T Consensus 65 ~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~ 143 (198)
T 1ds9_A 65 SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLE 143 (198)
T ss_dssp CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCS
T ss_pred ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCC
Confidence 445556666777777777777766666677788888888777776 57777778888888888876654 677778888
Q ss_pred EEeCcCCcCCCCCccc----------ccCCCCCCEEEccCCCCCC
Q 001142 237 NLDLSNNRLTSLGSLD----------LCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 237 ~L~Ls~N~Ls~~~p~~----------l~~L~~L~~L~Ls~N~L~~ 271 (1142)
.|+|++|.+++.+|.. +..+++|+.|| +|+++.
T Consensus 144 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 144 DLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp EEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred EEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 8888888887766532 67788888776 666654
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=2.9e-16 Score=165.49 Aligned_cols=43 Identities=12% Similarity=0.199 Sum_probs=21.7
Q ss_pred ccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCC
Q 001142 82 LIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISS 125 (1142)
Q Consensus 82 ~iP~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~ 125 (1142)
.+|..|..+++|++|+|++|.|+.+| .+.++++|+.|+|++|.
T Consensus 39 ~l~~~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~ 81 (198)
T 1ds9_A 39 KMDATLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNL 81 (198)
T ss_dssp CCHHHHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEE
T ss_pred hhhHHHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCC
Confidence 33344555555555555555555554 44555555555555444
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.43 E-value=1.8e-13 Score=155.74 Aligned_cols=216 Identities=12% Similarity=0.003 Sum_probs=160.2
Q ss_pred CCCcccccCCCCCCc--------------------ccCCCCCCC--------CCCCCEEEccCCCCCCCCcccccCCCCC
Q 001142 16 GPIKEKLPSEANKIN--------------------NEKNGSVND--------DDDDSVIDVSGKTVDFPLIESYGNRGGD 67 (1142)
Q Consensus 16 ~~~l~~L~~~~N~i~--------------------~l~~~~f~~--------l~~L~~LdLs~N~L~~~~p~~~~~l~~L 67 (1142)
.+.++.|++..|+|. .|+..+|.+ +++|+.|+|.+ +++.+.+..|. ++
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~---~~ 123 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFK---GC 123 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTT---TC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhh---cC
Confidence 346778888888887 677889999 99999999999 88877766664 55
Q ss_pred CCccEEEeecCCCCccCc-cccCCcCCcEEEccCCC----CCcCc-hhhcCCCCCC------------------------
Q 001142 68 NSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNE----INLFP-SEVGNLLGLE------------------------ 117 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~----L~~lP-~~l~~L~~L~------------------------ 117 (1142)
++|+.|+|++|.++.|++ .|.++.+|..|.+..+. +..+. ..|.++.+|+
T Consensus 124 ~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~ 203 (329)
T 3sb4_A 124 DNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRD 203 (329)
T ss_dssp TTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGG
T ss_pred cccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccc
Confidence 999999999999999965 68887778777776632 22222 2244444554
Q ss_pred --EEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCC-EE
Q 001142 118 --CLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLE-QL 192 (1142)
Q Consensus 118 --~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~-~L 192 (1142)
.+.+.++-...... ....+++|+.|+|++|.+ ...-...|.+|.+|+.|+|.+| ++.|+. .|.++++|+ .|
T Consensus 204 ~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i---~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l 279 (329)
T 3sb4_A 204 INFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNA---TTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTL 279 (329)
T ss_dssp CSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCC---CEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEE
T ss_pred cceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCc---ceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEE
Confidence 33332221000000 112378999999998543 2223346899999999999998 888876 789999999 99
Q ss_pred EccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeC
Q 001142 193 DLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDL 240 (1142)
Q Consensus 193 ~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~L~L 240 (1142)
+|.+ +++.|+ .+|.++++|+.|+|++|.++.|+. .|.++++|+.|+.
T Consensus 280 ~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 280 ELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 9998 899885 789999999999999999999976 5667999999874
No 396
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.37 E-value=9.8e-13 Score=150.26 Aligned_cols=113 Identities=23% Similarity=0.216 Sum_probs=100.2
Q ss_pred EEEccCC-CCCccCcccCCCCCCCEEEccC-CCCCccc-hhhcCCCCCCEEEccCCCCCccC-ccccCCCCCCEEeCcCC
Q 001142 168 KLSVCHF-SIRYLPPEIGCLSNLEQLDLSF-NKMKYLP-TEICYLKALISLKVANNKLVELP-SGLYLLQRLENLDLSNN 243 (1142)
Q Consensus 168 ~L~Ls~N-~L~~IP~~l~~L~~L~~L~Ls~-N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~IP-~~l~~L~~L~~L~Ls~N 243 (1142)
.++++++ +|+.||. |..+++|+.|+|++ |+|+.+| ..|+.|++|+.|+|++|+|+.+| ..|.+|++|+.|+|++|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 5788888 9999999 99999999999996 9999886 67999999999999999999775 46788999999999999
Q ss_pred cCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhcc
Q 001142 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCN 282 (1142)
Q Consensus 244 ~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~ 282 (1142)
+|+++++..|..++ |+.|+|++|+|.|.|++.....|.
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~ 128 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWE 128 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHH
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHH
Confidence 99999997777776 999999999999988876555443
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.31 E-value=6.6e-12 Score=129.91 Aligned_cols=64 Identities=28% Similarity=0.283 Sum_probs=30.9
Q ss_pred CCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCCCCccchh-hcCCCCCCEEEccCCCCCccC
Q 001142 163 LKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELP 226 (1142)
Q Consensus 163 L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~lP~~-l~~L~~L~~L~Ls~N~Ls~IP 226 (1142)
+++|+.|+|++|+|+.+|.. |..+++|++|+|++|+|+.+|.. |..+++|+.|+|++|.+...|
T Consensus 56 l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~ 121 (174)
T 2r9u_A 56 LVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDCEC 121 (174)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCTTB
T ss_pred CcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccccc
Confidence 33344444444444444432 34455555555555555554433 445555555555555555443
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.29 E-value=1.3e-11 Score=126.96 Aligned_cols=61 Identities=31% Similarity=0.393 Sum_probs=28.4
Q ss_pred CCCCcEEEccCCCCCccCcc-cCCCCCCCEEEccCCCCCccch-hhcCCCCCCEEEccCCCCC
Q 001142 163 LKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLV 223 (1142)
Q Consensus 163 L~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N~Ls 223 (1142)
+++|+.|+|++|+|+.+|.. |..+++|++|+|++|+|+.+|. .|..+++|+.|+|++|.++
T Consensus 53 l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 115 (170)
T 3g39_A 53 LTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWD 115 (170)
T ss_dssp CTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred cccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCC
Confidence 33344444444444444332 3444555555555555554433 2444555555555555554
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=1.4e-12 Score=151.41 Aligned_cols=164 Identities=20% Similarity=0.170 Sum_probs=88.2
Q ss_pred CCcEEEccCCCCCcC-----chhhc-CCCCCCEEEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCccc-chhhh-c
Q 001142 92 KLRNLKFFGNEINLF-----PSEVG-NLLGLECLQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLT-LLSEI-A 161 (1142)
Q Consensus 92 ~L~~L~Ls~N~L~~l-----P~~l~-~L~~L~~L~Ls~N~l~~~~--~~~~~L~~L~~L~Ls~n~~n~~~~~-lp~~l-~ 161 (1142)
.|+.|+|++|.|+.. ...+. +.++|+.|+|++|.++..+ .....+.+|+.|+|++|.+...... +...+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 455666666665522 11122 1245555555555543221 1122334555555555433221111 11122 2
Q ss_pred CCCCCcEEEccCCCCCc-----cCcccCCCCCCCEEEccCCCCCc-----cchhhcCCCCCCEEEccCCCCCc-----cC
Q 001142 162 GLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKVANNKLVE-----LP 226 (1142)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~-----IP~~l~~L~~L~~L~Ls~N~L~~-----lP~~l~~L~~L~~L~Ls~N~Ls~-----IP 226 (1142)
..++|+.|+|++|.|+. ++..+..+++|++|+|++|.|+. |+..+...++|+.|+|++|.|+. ++
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 35667777777777753 34445566777777777777762 34556666777777777777762 34
Q ss_pred ccccCCCCCCEEeCcCCcCCCCCcccccC
Q 001142 227 SGLYLLQRLENLDLSNNRLTSLGSLDLCL 255 (1142)
Q Consensus 227 ~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~ 255 (1142)
..+...++|+.|+|++|.|+......+..
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 44555667777777777777554444433
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.17 E-value=3.7e-12 Score=147.83 Aligned_cols=133 Identities=20% Similarity=0.265 Sum_probs=83.3
Q ss_pred CCcEEEccCCCCCc--CchhhcCCCCCCEEEccCCCCCCCcc-c----c-cCCCCCCEEECCCCCCCCC-cccchhhhcC
Q 001142 92 KLRNLKFFGNEINL--FPSEVGNLLGLECLQIKISSPGVNGF-A----L-NKLKGLKELELSKVPPRPS-VLTLLSEIAG 162 (1142)
Q Consensus 92 ~L~~L~Ls~N~L~~--lP~~l~~L~~L~~L~Ls~N~l~~~~~-~----~-~~L~~L~~L~Ls~n~~n~~-~~~lp~~l~~ 162 (1142)
+|++|+|++|.|+. +..-...+++|+.|+|++|.++..+. . + ...++|++|+|++|.+... ...++..+..
T Consensus 102 ~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~ 181 (372)
T 3un9_A 102 ALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAG 181 (372)
T ss_dssp CEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHT
T ss_pred CceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhc
Confidence 45555555555441 11111123344555555554433221 1 1 2345666666666543221 1234556677
Q ss_pred CCCCcEEEccCCCCCc-----cCcccCCCCCCCEEEccCCCCCc-----cchhhcCCCCCCEEEccCCCCCc
Q 001142 163 LKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKVANNKLVE 224 (1142)
Q Consensus 163 L~~L~~L~Ls~N~L~~-----IP~~l~~L~~L~~L~Ls~N~L~~-----lP~~l~~L~~L~~L~Ls~N~Ls~ 224 (1142)
+++|+.|+|++|.|+. ++..+...++|+.|+|++|.|+. ++..+...++|+.|+|++|.|+.
T Consensus 182 ~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 182 NTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 8889999999999873 35567778899999999999983 45667778999999999999983
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.06 E-value=3.1e-10 Score=129.47 Aligned_cols=98 Identities=9% Similarity=0.119 Sum_probs=44.8
Q ss_pred cCCCC-CCcccCCCCCCCCCCCCEEEccC-CCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEcc
Q 001142 23 PSEAN-KINNEKNGSVNDDDDDSVIDVSG-KTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFF 99 (1142)
Q Consensus 23 ~~~~N-~i~~l~~~~f~~l~~L~~LdLs~-N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls 99 (1142)
....+ +|+.++. |..+.+|++|+|++ |+|+++++..|+.+ ++|+.|+|++|+|+.+|+ .|.+|++|++|+|+
T Consensus 14 ~~~~~n~l~~ip~--l~~~~~L~~L~l~~~n~l~~~~~~~~~~l---~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 14 RCTRDGALDSLHH--LPGAENLTELYIENQQHLQHLELRDLRGL---GELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp ECCSSCCCTTTTT--SCSCSCCSEEECCSCSSCCEECGGGSCSC---CCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred EcCCCCCCCccCC--CCCCCCeeEEEccCCCCCCCcChhHhccc---cCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 33333 4554443 44555555555553 55554444433322 455555555555554432 34455555555555
Q ss_pred CCCCCcCchhhcCCCCCCEEEccCCC
Q 001142 100 GNEINLFPSEVGNLLGLECLQIKISS 125 (1142)
Q Consensus 100 ~N~L~~lP~~l~~L~~L~~L~Ls~N~ 125 (1142)
+|+|+.+|..+.....|+.|+|.+|.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~ 114 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNP 114 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSC
T ss_pred CCccceeCHHHcccCCceEEEeeCCC
Confidence 55555444433222224444444443
No 402
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.03 E-value=4.9e-10 Score=122.53 Aligned_cols=140 Identities=14% Similarity=0.108 Sum_probs=106.3
Q ss_pred CCCcceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 884 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~ 884 (1142)
+..|++...++.|+.+.||++...+..+++|+....... .... +.+|+++++.+. |..+.++++++...+
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~----~~~~----~~~E~~~l~~l~~~~~vP~v~~~~~~~~- 83 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKG----TTYD----VEREKDMMLWLEGKLPVPKVLHFERHDG- 83 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTT----STTC----HHHHHHHHHHHTTTSCCCCEEEEEEETT-
T ss_pred hccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCC----CHHH----HHHHHHHHHHHhcCCCCCeEEEEEecCC-
Confidence 456889999999999999999887788899986432111 1112 378999999885 777889998877543
Q ss_pred CCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-----------------
Q 001142 885 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS----------------- 947 (1142)
Q Consensus 885 ~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs----------------- 947 (1142)
..|+||||++|.+|.+.+. +......++.+++.+|..||+
T Consensus 84 -------------~~~lv~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~ 140 (263)
T 3tm0_A 84 -------------WSNLLMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLA 140 (263)
T ss_dssp -------------EEEEEEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHH
T ss_pred -------------ceEEEEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHH
Confidence 3499999999999876521 112234778899999999998
Q ss_pred ------------------------------------------CCccccCCCCCCeeeccccccCCCCCeEEEeecCCcc
Q 001142 948 ------------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 984 (1142)
Q Consensus 948 ------------------------------------------~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~ 984 (1142)
.+++|+|++|.|||++.+ ..+.|+||+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~-------~~~~lIDwe~a~ 212 (263)
T 3tm0_A 141 ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDG-------KVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETT-------EEEEECCCTTCE
T ss_pred HHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECC-------cEEEEEEchhcc
Confidence 458999999999999754 456799999773
No 403
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.95 E-value=2.1e-08 Score=116.70 Aligned_cols=246 Identities=8% Similarity=0.100 Sum_probs=150.0
Q ss_pred CCCCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCC---CCCCCcccccCCCCCCCccEEEeecCCCCccCc-ccc
Q 001142 13 SPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKT---VDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVG 88 (1142)
Q Consensus 13 ~~~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~---L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~ 88 (1142)
.+....|+.+.+- +.++.|...+|.++.+|+.+.++.|. ++.+-...| .++.+|+.+.+.++ ++.|+. .|.
T Consensus 60 ~~~~~~L~sI~iP-~svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF---~~c~~L~~i~~~~~-~~~I~~~aF~ 134 (394)
T 4gt6_A 60 CNYKYVLTSVQIP-DTVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAF---MFCSELTDIPILDS-VTEIDSEAFH 134 (394)
T ss_dssp TTCCSCCCEEEEC-TTCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTT---TTCTTCCBCGGGTT-CSEECTTTTT
T ss_pred cCCCCcCEEEEEC-CCeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhc---hhcccceeeccCCc-cceehhhhhh
Confidence 3333346665554 35888989999999999999998774 443333334 33456666666544 566643 456
Q ss_pred CCcCCcEEEccCCCCCcCch-hhcCCCCCCEEEccCC----------------------CCCCCcccccCCCCCCEEECC
Q 001142 89 RYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKIS----------------------SPGVNGFALNKLKGLKELELS 145 (1142)
Q Consensus 89 ~L~~L~~L~Ls~N~L~~lP~-~l~~L~~L~~L~Ls~N----------------------~l~~~~~~~~~L~~L~~L~Ls 145 (1142)
.+.+|+.+.|.. .++.|+. .|.++.+|+.+.+..+ ....-...|..+.+|......
T Consensus 135 ~c~~L~~i~lp~-~~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~~~~ 213 (394)
T 4gt6_A 135 HCEELDTVTIPE-GVTSVADGMFSYCYSLHTVTLPDSVTAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTITSD 213 (394)
T ss_dssp TCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEEEEC
T ss_pred hhcccccccccc-eeeeecccceecccccccccccceeeEeccccccccceeEEEECCcccccccchhhhccccceeccc
Confidence 666666666643 2333332 2444555555555433 222222233444444433322
Q ss_pred CCCCC-------------------------CCcccch--------hhhcCCCCCcEEEccCCCCCccC-cccCCCCCCCE
Q 001142 146 KVPPR-------------------------PSVLTLL--------SEIAGLKCLTKLSVCHFSIRYLP-PEIGCLSNLEQ 191 (1142)
Q Consensus 146 ~n~~n-------------------------~~~~~lp--------~~l~~L~~L~~L~Ls~N~L~~IP-~~l~~L~~L~~ 191 (1142)
.+... ...-.+| .+|.++..|+.+.+..+-. .|. ..|.++++|+.
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~L~~ 292 (394)
T 4gt6_A 214 SESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPALQD 292 (394)
T ss_dssp CSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTTCCE
T ss_pred ccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccc-eecCccccccccccc
Confidence 21100 0001122 3466777788887765543 343 36678888888
Q ss_pred EEccCCCCCccc-hhhcCCCCCCEEEccCCCCCccCc-cccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCC
Q 001142 192 LDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNK 268 (1142)
Q Consensus 192 L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~IP~-~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~ 268 (1142)
+.+. +.++.|+ ..|.++.+|+.+.|..| ++.|.. .|.+|.+|+.+.|..+ ++.+....|.++.+|+.+++.+|.
T Consensus 293 i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~ 368 (394)
T 4gt6_A 293 IEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSR 368 (394)
T ss_dssp EECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCH
T ss_pred ccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCce
Confidence 8885 5677776 45777888999998754 777754 4556888999988654 788888888899999999988874
No 404
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.91 E-value=1e-08 Score=119.36 Aligned_cols=188 Identities=15% Similarity=0.149 Sum_probs=107.9
Q ss_pred CCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCC
Q 001142 68 NSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSK 146 (1142)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~ 146 (1142)
.+|+.+.|..| ++.|+. .|.++..|+.+.+.++.. .+.......++|+.+.+..+....-...|..+..|+.+.+..
T Consensus 185 ~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~-~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~ 262 (394)
T 4fs7_A 185 GKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLY-YLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQN 262 (394)
T ss_dssp TTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCC-EECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECC
T ss_pred CCceEEEcCCC-ceEeCchhhccccccceeecCCCce-EeehhhcccCCCceEEECCCceecccccccccccceeEEcCC
Confidence 44444444433 444432 344444444444433221 222223333445555443332222223455555666665554
Q ss_pred CCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCc
Q 001142 147 VPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVE 224 (1142)
Q Consensus 147 n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~ 224 (1142)
+ ........|..+..|+.+.+..+. +|. .|..+.+|+.+.+..| ++.|+ .+|.++.+|+.++|.++ ++.
T Consensus 263 ~----~~~i~~~~F~~~~~l~~~~~~~~~---i~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~ 333 (394)
T 4fs7_A 263 N----KLRIGGSLFYNCSGLKKVIYGSVI---VPEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEE 333 (394)
T ss_dssp T----TCEECSCTTTTCTTCCEEEECSSE---ECTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCE
T ss_pred C----cceeeccccccccccceeccCcee---eccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccE
Confidence 2 122223345566666666655443 333 4667788888888654 77774 56777888888888644 777
Q ss_pred cCc-cccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCC
Q 001142 225 LPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1142)
Q Consensus 225 IP~-~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N 267 (1142)
|+. .|.++++|+.++|..| ++.+....|.++.+|+.++|..|
T Consensus 334 I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 334 IGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp ECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred EhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 754 4556888888888777 78787778888888888888654
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.82 E-value=3.7e-08 Score=114.67 Aligned_cols=232 Identities=13% Similarity=0.110 Sum_probs=123.9
Q ss_pred CCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCC----
Q 001142 28 KINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNE---- 102 (1142)
Q Consensus 28 ~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~---- 102 (1142)
+++.|...+|.++.+|+.++|.. .++.+...+| .++++|+.++|.+| ++.|+. .|.++.+|+.+.+..+-
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF---~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~ 132 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAF---ENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIG 132 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTTT---TTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEEC
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhHh---hCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeec
Confidence 45666666677766777776653 3554444333 33366666666544 555643 45555555555543321
Q ss_pred -----------------CCcCc-hhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCC
Q 001142 103 -----------------INLFP-SEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLK 164 (1142)
Q Consensus 103 -----------------L~~lP-~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~ 164 (1142)
+..+. ..|.++++|+.+.+..+........|..+.+|+.+.+..+ ....-...|.++.
T Consensus 133 ~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~I~~~~F~~c~~L~~i~l~~~----~~~I~~~~F~~~~ 208 (394)
T 4fs7_A 133 VEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMETLHNGLFSGCGKLKSIKLPRN----LKIIRDYCFAECI 208 (394)
T ss_dssp TTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCBCCCCTT----CCEECTTTTTTCT
T ss_pred ceeeecccccccccCccccccchhhhcccCCCcEEecCCccceeccccccCCCCceEEEcCCC----ceEeCchhhcccc
Confidence 11111 2355666777777765543333455666666666666442 1111112233333
Q ss_pred CCcEEEccCC---------------------CCCccCc-ccCCCCCCCEEEccCCCCC--------------------cc
Q 001142 165 CLTKLSVCHF---------------------SIRYLPP-EIGCLSNLEQLDLSFNKMK--------------------YL 202 (1142)
Q Consensus 165 ~L~~L~Ls~N---------------------~L~~IP~-~l~~L~~L~~L~Ls~N~L~--------------------~l 202 (1142)
.|+.+.+..+ .++.|.. .+..+.+|+.+.+..|... .+
T Consensus 209 ~L~~i~~~~~~~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i 288 (394)
T 4fs7_A 209 LLENMEFPNSLYYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIV 288 (394)
T ss_dssp TCCBCCCCTTCCEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEE
T ss_pred ccceeecCCCceEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceee
Confidence 3333322211 1122222 3445556666666554322 12
Q ss_pred c-hhhcCCCCCCEEEccCCCCCccCcc-ccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 203 P-TEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 203 P-~~l~~L~~L~~L~Ls~N~Ls~IP~~-l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
| ..+..+.+|+.+.+.+| ++.|+.. +.++.+|+.++|.++ ++.+....|.++.+|+.++|..| ++.
T Consensus 289 ~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~ 356 (394)
T 4fs7_A 289 PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRK 356 (394)
T ss_dssp CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCE
T ss_pred ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccE
Confidence 2 23556677777777654 6667543 445788888888644 77777777888888888877665 443
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.82 E-value=1.9e-09 Score=124.63 Aligned_cols=82 Identities=13% Similarity=0.175 Sum_probs=49.1
Q ss_pred CCCCCCEEEccCCCCC-ccchhhc---CCCCCCEEEccCCCCCc-----cCccccCCCCCCEEeCcCCcCCCCCcccccC
Q 001142 185 CLSNLEQLDLSFNKMK-YLPTEIC---YLKALISLKVANNKLVE-----LPSGLYLLQRLENLDLSNNRLTSLGSLDLCL 255 (1142)
Q Consensus 185 ~L~~L~~L~Ls~N~L~-~lP~~l~---~L~~L~~L~Ls~N~Ls~-----IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~ 255 (1142)
.+++|+.|+|++|.+. ..+..+. .+++|+.|+|+.|.|+. |+..+.++++|+.|+|++|.|+...-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 4677777777777776 2333332 46677777777777762 4444455677777777777766432222332
Q ss_pred -CCCCCEEEccCCC
Q 001142 256 -MHNLQNLNLQYNK 268 (1142)
Q Consensus 256 -L~~L~~L~Ls~N~ 268 (1142)
+ ...+++++|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 3456666665
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.80 E-value=1.1e-07 Score=109.61 Aligned_cols=238 Identities=13% Similarity=0.066 Sum_probs=134.3
Q ss_pred cccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEc
Q 001142 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKF 98 (1142)
Q Consensus 19 l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~L 98 (1142)
++++.+. ..|+.|...+|.++.+|+.++|..+ ++.+-...|.+. +|+.+.+..| ++.|+.......+|+.+.|
T Consensus 48 i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c----~l~~i~~~~~-l~~I~~~aF~~~~L~~i~l 120 (379)
T 4h09_A 48 ISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT----KLQSYTGMER-VKKFGDYVFQGTDLDDFEF 120 (379)
T ss_dssp CSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC----CCCEEEECTT-CCEECTTTTTTCCCSEEEC
T ss_pred CEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC----CCceEECCce-eeEeccceeccCCcccccC
Confidence 4444443 4588899999999999999999754 766655555433 6888888765 8888764333458999998
Q ss_pred cCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCC----------------------------
Q 001142 99 FGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPR---------------------------- 150 (1142)
Q Consensus 99 s~N~L~~lP~~l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~n---------------------------- 150 (1142)
.++ ++.+....+.-.+|+.+.+..+-.......|..+.+|+.+.+..+...
T Consensus 121 p~~-~~~i~~~~F~~~~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (379)
T 4h09_A 121 PGA-TTEIGNYIFYNSSVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEF 199 (379)
T ss_dssp CTT-CCEECTTTTTTCCCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEE
T ss_pred CCc-cccccccccccceeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceecccccccccccc
Confidence 754 444444433333555555543332222334555555555444332110
Q ss_pred ----CCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCccc-hhhcCCCCCCEEEccCCCCCc
Q 001142 151 ----PSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVE 224 (1142)
Q Consensus 151 ----~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~Ls~N~Ls~ 224 (1142)
.........+..+..|+.+.+..+ +..++. .+..+.+|+.+.+..+ ++.|. ..+.++.+|+.+.+.. .++.
T Consensus 200 ~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~ 276 (379)
T 4h09_A 200 TIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKT 276 (379)
T ss_dssp ECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSE
T ss_pred ccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-ccee
Confidence 000011122334455555555433 333332 4456666666666554 55553 3455566666666643 3555
Q ss_pred cCcc-ccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCC
Q 001142 225 LPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1142)
Q Consensus 225 IP~~-l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N 267 (1142)
|+.. +.++++|+.+.|.+|.++.+....|.++.+|+.+.|..|
T Consensus 277 i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 277 VPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp ECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred ccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 5443 334666666666666666666666666666666666543
No 408
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.76 E-value=1.9e-07 Score=108.54 Aligned_cols=235 Identities=11% Similarity=0.130 Sum_probs=155.0
Q ss_pred CCcccCCCCCCCCC-CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC---CCccCc-cccCCcCCcEEEccCCC
Q 001142 28 KINNEKNGSVNDDD-DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV---LNLIPK-SVGRYEKLRNLKFFGNE 102 (1142)
Q Consensus 28 ~i~~l~~~~f~~l~-~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~---Lt~iP~-~l~~L~~L~~L~Ls~N~ 102 (1142)
.++.|...+|.+++ .|+.+.|-.+ ++.+-..+| .++++|+.+.+..|. ++.|+. +|..+.+|+.+.+.++
T Consensus 50 ~Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF---~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~- 124 (394)
T 4gt6_A 50 PVSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAF---YNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS- 124 (394)
T ss_dssp EEEEECTTTTTTCCSCCCEEEECTT-CCEECTTTT---TTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-
T ss_pred eeeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHh---hCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-
Confidence 47889999999985 6999999764 766666555 455999999998874 778865 6888999999888754
Q ss_pred CCcCchh-hcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCC---------CCC-cccch--------hhhcCC
Q 001142 103 INLFPSE-VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPP---------RPS-VLTLL--------SEIAGL 163 (1142)
Q Consensus 103 L~~lP~~-l~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~n~~---------n~~-~~~lp--------~~l~~L 163 (1142)
++.|+.. |.++.+|+.+.+..+........|..+.+|+.+.+..+-. +.+ .-.+| ..|.++
T Consensus 125 ~~~I~~~aF~~c~~L~~i~lp~~~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c 204 (394)
T 4gt6_A 125 VTEIDSEAFHHCEELDTVTIPEGVTSVADGMFSYCYSLHTVTLPDSVTAIEERAFTGTALTQIHIPAKVTRIGTNAFSEC 204 (394)
T ss_dssp CSEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCCCSEEEECTTCCEECTTTTTTC
T ss_pred cceehhhhhhhhcccccccccceeeeecccceecccccccccccceeeEeccccccccceeEEEECCcccccccchhhhc
Confidence 7777654 7889999999997665444556788888898888865210 000 00011 223344
Q ss_pred CCCcEEEccCCCCC-----------------------------ccCc--------ccCCCCCCCEEEccCCCCCcc-chh
Q 001142 164 KCLTKLSVCHFSIR-----------------------------YLPP--------EIGCLSNLEQLDLSFNKMKYL-PTE 205 (1142)
Q Consensus 164 ~~L~~L~Ls~N~L~-----------------------------~IP~--------~l~~L~~L~~L~Ls~N~L~~l-P~~ 205 (1142)
..|.......+... .+|. .|..+.+|+.+.+.++. ..| ...
T Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~a 283 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSV-VSIGTGA 283 (394)
T ss_dssp TTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTC-CEECTTT
T ss_pred cccceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEeccccc-ceecCcc
Confidence 44444332221111 1222 34556667777775443 334 345
Q ss_pred hcCCCCCCEEEccCCCCCccCcccc-CCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCC
Q 001142 206 ICYLKALISLKVANNKLVELPSGLY-LLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1142)
Q Consensus 206 l~~L~~L~~L~Ls~N~Ls~IP~~l~-~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1142)
|.++.+|+.+.+. +.++.|+...+ ++.+|+.++|..| ++.+....|.++.+|+.+.|..| ++.
T Consensus 284 F~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~ 347 (394)
T 4gt6_A 284 FMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTK 347 (394)
T ss_dssp TTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCB
T ss_pred cccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCE
Confidence 6677778888775 56777765444 4788888888754 77777777888888888888544 443
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.74 E-value=8.6e-09 Score=111.58 Aligned_cols=134 Identities=14% Similarity=0.114 Sum_probs=91.3
Q ss_pred CCCcceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCC--ccceeeeEecC
Q 001142 806 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC--IVEMYGHKISS 882 (1142)
Q Consensus 806 ~~~y~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpN--IVkl~g~~~~~ 882 (1142)
+..|.+....+.|..+.||++... +..+++|+..-. .... +.+|+.+++.+.+.+ +.+++++....
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~----~~~E~~~l~~l~~~~~~vP~~~~~~~~~ 87 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNE----LQDEAARLSWLATTGVPCAAVLDVVTEA 87 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSC----HHHHHHHHHHHHTTTCCBCCEEEEEECS
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchh----hhHHHHHHHHHHhCCCCCCeEEEeccCC
Confidence 445666555556777999999764 456888885321 1122 268999998885434 55688876643
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC-------------
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH------------- 949 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~g------------- 949 (1142)
+ ..++||||++|.+|. .. ..+ ...++.+++..|..||+..
T Consensus 88 ~--------------~~~~v~e~i~G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~ 140 (264)
T 1nd4_A 88 G--------------RDWLLLGEVPGQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHR 140 (264)
T ss_dssp S--------------CEEEEEECCSSEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHH
T ss_pred C--------------CCEEEEEecCCcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHH
Confidence 3 249999999988873 11 011 1245666777777777543
Q ss_pred ---------------------------------------------ccccCCCCCCeeeccccccCCCCCeEEEeecCCcc
Q 001142 950 ---------------------------------------------IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 984 (1142)
Q Consensus 950 ---------------------------------------------IvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~ 984 (1142)
++|+|++|.|||++.+ ..+.|+|||.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~-------~~~~liD~~~a~ 213 (264)
T 1nd4_A 141 IERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENG-------RFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETT-------EEEEECCCTTCE
T ss_pred HHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECC-------cEEEEEcchhcc
Confidence 9999999999999764 456799999874
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.73 E-value=1.4e-08 Score=116.44 Aligned_cols=148 Identities=15% Similarity=0.176 Sum_probs=103.8
Q ss_pred ceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC--CCCccceeeeEecCCCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--HpNIVkl~g~~~~~~~~~~ 887 (1142)
...+.|+.|.++.||++...+..+++|+..... ......... +.+|+.+++.+. +..+.++++++.+....
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~-~~~~~~~~~----~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~-- 113 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPK-SKLLPSAHA----IEREYRVMDALAGTDVPVAKMYALCEDESVI-- 113 (359)
T ss_dssp CEEEECCC-CCSCEEEEECSSCEEEEECCCC-----------C----HHHHHHHHHHHTTSSSCCCCEEEEECCTTTT--
T ss_pred ceEEEcCCcccceEEEEEECCceEEEEeCCCCC-CCCCCcHHH----HHHHHHHHHHhhcCCCCCCcEEEECCCCCcc--
Confidence 346789999999999999877777777532001 000111222 378999999986 55678888887654211
Q ss_pred CCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh--------------------
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-------------------- 947 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-------------------- 947 (1142)
...++||||++|..+.+.. ...++......++.+++..|..||+
T Consensus 114 ---------g~~~~vme~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~ 177 (359)
T 3dxp_A 114 ---------GRAFYIMEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQR 177 (359)
T ss_dssp ---------SSCEEEEECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHH
T ss_pred ---------CCeEEEEEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHH
Confidence 1348999999987764311 1246788888999999999999997
Q ss_pred --------------------------------------CCccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 948 --------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 948 --------------------------------------~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
.+++|||+++.|||++.+.. ..+.|+||+.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~-----~v~~viDwe~a~~ 248 (359)
T 3dxp_A 178 QIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEP-----RVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSS-----CEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCC-----cEEEEECcccccc
Confidence 36999999999999986521 3468999999864
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.64 E-value=1.9e-08 Score=116.25 Aligned_cols=81 Identities=21% Similarity=0.231 Sum_probs=58.4
Q ss_pred CCCCCcEEEccCCCCCc-cCccc---CCCCCCCEEEccCCCCCc-----cchhhcCCCCCCEEEccCCCCC-ccCccccC
Q 001142 162 GLKCLTKLSVCHFSIRY-LPPEI---GCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKVANNKLV-ELPSGLYL 231 (1142)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~-IP~~l---~~L~~L~~L~Ls~N~L~~-----lP~~l~~L~~L~~L~Ls~N~Ls-~IP~~l~~ 231 (1142)
.+++|+.|+|.+|.++. .+..+ ..+++|+.|+|+.|.|+. |+..+..+++|+.|+|++|.|+ ..-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 46788999998888862 22222 357889999999999984 4555667889999999999987 22222332
Q ss_pred -CCCCCEEeCcCCc
Q 001142 232 -LQRLENLDLSNNR 244 (1142)
Q Consensus 232 -L~~L~~L~Ls~N~ 244 (1142)
+ ...++++.|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 4668999887
No 412
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.61 E-value=6.3e-08 Score=108.54 Aligned_cols=197 Identities=19% Similarity=0.219 Sum_probs=117.6
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCC--ccceeeeEecCCCCCCCC
Q 001142 813 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSC--IVEMYGHKISSKWLPSAD 889 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpN--IVkl~g~~~~~~~~~~~~ 889 (1142)
+.++.|.+..||++. ..+++|+.. ....... +.+|+++++.+. +.. +.+++........
T Consensus 26 ~~~~~G~~n~v~~v~---~~~vlR~~~------~~~~~~~----~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~----- 87 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN---RDFIFKFPK------HSRGSTN----LFNEVNILKRIHNKLPLPIPEVVFTGMPSET----- 87 (304)
T ss_dssp CEEEECSSEEEEEST---TSEEEEEES------SHHHHHH----HHHHHHHHHHHTTSSSSCCCCEEEECCCCSS-----
T ss_pred EecCCCCcceEEEEC---CEEEEEecC------CcchHHH----HHHHHHHHHHHHhcCCCCCCceEeecCCCCC-----
Confidence 458999999999864 567787642 1122233 378999998874 433 3344443322111
Q ss_pred CCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh----------------------
Q 001142 890 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---------------------- 947 (1142)
Q Consensus 890 ~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs---------------------- 947 (1142)
....|+|||+++|.+|...... .++..+...++.|++..|..||+
T Consensus 88 ------~~~~~~vm~~i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~ 154 (304)
T 3sg8_A 88 ------YQMSFAGFTKIKGVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDN 154 (304)
T ss_dssp ------CSCSCEEEECCCCEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHH
T ss_pred ------CCcceEEEcccCCeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHH
Confidence 1233899999999887654332 36777888888888888888885
Q ss_pred ------------------------------------CCccccCCCCCCeeeccccccCCCCCeEEEeecCCccccccccc
Q 001142 948 ------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLH 991 (1142)
Q Consensus 948 ------------------------------------~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~ 991 (1142)
..++|+|++|.||+++.+. ...+.|+||+.+..-.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~-----~~~~~~iD~~~~~~~~~~~D 229 (304)
T 3sg8_A 155 KKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEK-----NTICGIIDFGDAAISDPDND 229 (304)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTT-----TEEEEECCCTTCEEECTTHH
T ss_pred HHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCC-----CCEEEEEeCCCCccCChHHH
Confidence 1479999999999998731 15688999999864322110
Q ss_pred ccccccCCC-CCCC---CccCCCcccc-hhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 001142 992 TCCIAHRGI-PAPD---VCVGTPRWMA-PEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYM 1051 (1142)
Q Consensus 992 ~~~~~~~~~-~~~~---~~~GT~~Y~A-PE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG~~Pf~ 1051 (1142)
......... .... .......+.. |+.... .....+.|+++.++|.+.+|..+|.
T Consensus 230 l~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r------~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 230 FISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEK------YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHH------HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHH------HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 000000000 0000 0000000111 222211 1133689999999999999987763
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.40 E-value=6.8e-06 Score=94.63 Aligned_cols=241 Identities=11% Similarity=0.089 Sum_probs=158.1
Q ss_pred cCCCCCCcccccCCCCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCc
Q 001142 12 KSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYE 91 (1142)
Q Consensus 12 ~~~~~~~l~~L~~~~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~ 91 (1142)
+..+. +|+.+.+. ++++.|...+|.++ +|+.+.+..+ ++.+....|.. .+|+.+.|..+ ++.+......-.
T Consensus 65 F~~C~-~L~~I~lp-~~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~----~~L~~i~lp~~-~~~i~~~~F~~~ 135 (379)
T 4h09_A 65 FNSCY-NMTKVTVA-STVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG----TDLDDFEFPGA-TTEIGNYIFYNS 135 (379)
T ss_dssp TTTCT-TCCEEEEC-TTCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT----CCCSEEECCTT-CCEECTTTTTTC
T ss_pred hhCCC-CCCEEEeC-CcceEechhhhcCC-CCceEECCce-eeEeccceecc----CCcccccCCCc-cccccccccccc
Confidence 34444 67777664 45888888899887 6777777644 44443333432 36778877655 555543222222
Q ss_pred CCcEEEccCCCCCcCc-hhhcCCCCCCEEE------------------------------------ccCCCCCCCccccc
Q 001142 92 KLRNLKFFGNEINLFP-SEVGNLLGLECLQ------------------------------------IKISSPGVNGFALN 134 (1142)
Q Consensus 92 ~L~~L~Ls~N~L~~lP-~~l~~L~~L~~L~------------------------------------Ls~N~l~~~~~~~~ 134 (1142)
+|+.+.+..+ ++.+. ..+.+..+|+.+. +..+........+.
T Consensus 136 ~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~ 214 (379)
T 4h09_A 136 SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYGFS 214 (379)
T ss_dssp CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTTTT
T ss_pred eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecccc
Confidence 4444444322 33332 2233344444433 32222222234566
Q ss_pred CCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-ccCCCCCCCEEEccCCCCCccc-hhhcCCCCC
Q 001142 135 KLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKAL 212 (1142)
Q Consensus 135 ~L~~L~~L~Ls~n~~n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~L~~lP-~~l~~L~~L 212 (1142)
...+|+.+.+.. +....-...|.++..|+.+.+..+ ++.|.. .|.++.+|+.+.+.. .+..++ ..|.++.+|
T Consensus 215 ~~~~l~~i~~~~----~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~~L 288 (379)
T 4h09_A 215 YGKNLKKITITS----GVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCSNL 288 (379)
T ss_dssp TCSSCSEEECCT----TCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCTTC
T ss_pred cccccceeeecc----ceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cceecccccccccccc
Confidence 677888888765 233333456788899999999776 677755 678899999999965 477776 467889999
Q ss_pred CEEEccCCCCCccCcc-ccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCC
Q 001142 213 ISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLL 270 (1142)
Q Consensus 213 ~~L~Ls~N~Ls~IP~~-l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~ 270 (1142)
+.+.|.+|.++.|+.. +.++.+|+.+.|..| ++.+...+|.++.+|+.+.|..| ++
T Consensus 289 ~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~ 345 (379)
T 4h09_A 289 TKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-IT 345 (379)
T ss_dssp CEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CC
T ss_pred ccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cC
Confidence 9999999999999654 556999999999765 88888888999999999988655 44
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.36 E-value=1.1e-07 Score=99.03 Aligned_cols=115 Identities=14% Similarity=0.069 Sum_probs=82.8
Q ss_pred chhhhcCCCCCcEEEccCC-CCCc-----cCcccCCCCCCCEEEccCCCCC-----ccchhhcCCCCCCEEEccCCCCCc
Q 001142 156 LLSEIAGLKCLTKLSVCHF-SIRY-----LPPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLVE 224 (1142)
Q Consensus 156 lp~~l~~L~~L~~L~Ls~N-~L~~-----IP~~l~~L~~L~~L~Ls~N~L~-----~lP~~l~~L~~L~~L~Ls~N~Ls~ 224 (1142)
+...+...+.|+.|+|++| .|+. +...+...++|++|+|++|+|. .|...+...++|+.|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445566778888888888 7762 3445566778888888888887 245556667788888888888872
Q ss_pred -----cCccccCCCCCCEEeC--cCCcCCCCCc----ccccCCCCCCEEEccCCCCC
Q 001142 225 -----LPSGLYLLQRLENLDL--SNNRLTSLGS----LDLCLMHNLQNLNLQYNKLL 270 (1142)
Q Consensus 225 -----IP~~l~~L~~L~~L~L--s~N~Ls~~~p----~~l~~L~~L~~L~Ls~N~L~ 270 (1142)
|...+...++|+.|+| ++|.|+.... ..+...++|+.|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 5666777778888888 7788875432 23445578888888888764
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.35 E-value=6.8e-08 Score=106.67 Aligned_cols=94 Identities=21% Similarity=0.182 Sum_probs=55.2
Q ss_pred EEccCCCCCccCccc----CCCCCCCEEEccCCCCCcc---chhhcCCCCCCEEEccCCCCCccCccccCCC--CCCEEe
Q 001142 169 LSVCHFSIRYLPPEI----GCLSNLEQLDLSFNKMKYL---PTEICYLKALISLKVANNKLVELPSGLYLLQ--RLENLD 239 (1142)
Q Consensus 169 L~Ls~N~L~~IP~~l----~~L~~L~~L~Ls~N~L~~l---P~~l~~L~~L~~L~Ls~N~Ls~IP~~l~~L~--~L~~L~ 239 (1142)
++++.|....++..+ .++++|+.|+|++|+|+.| |..+..+++|+.|+|++|+|+.+ ..+..+. +|+.|+
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~ 226 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELW 226 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEE
Confidence 455556544333321 3566777777777777644 34556677777777777777655 2233333 677777
Q ss_pred CcCCcCCCCCc-------ccccCCCCCCEEE
Q 001142 240 LSNNRLTSLGS-------LDLCLMHNLQNLN 263 (1142)
Q Consensus 240 Ls~N~Ls~~~p-------~~l~~L~~L~~L~ 263 (1142)
|++|.|++..| ..+..+++|+.||
T Consensus 227 L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 227 LDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred ccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 77777765443 1255666676665
No 416
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.29 E-value=3.2e-06 Score=95.44 Aligned_cols=131 Identities=21% Similarity=0.204 Sum_probs=93.3
Q ss_pred ceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC----CCccceeeeEecCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH----SCIVEMYGHKISSKWL 885 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H----pNIVkl~g~~~~~~~~ 885 (1142)
...+.++.|....||++ +..+++|+.. ....... +.+|.+++..+.+ ..+.+++++ +
T Consensus 40 ~~v~~l~~G~~n~vy~v---g~~~vlR~~~------~~~~~~~----~~~E~~~L~~L~~~~~~~~vP~v~~~----~-- 100 (320)
T 3r70_A 40 NELRYLSSGDDSDTFLC---NEQYVVKVPK------RDSVRIS----QKRELELYRFLENCKLSYQIPAVVYQ----S-- 100 (320)
T ss_dssp SCEEEEEECSSEEEEEE---TTTEEEEEES------SHHHHHH----HHHHHHHHHHHTTSCCSSBCCCEEEE----C--
T ss_pred EEEEeCCCCCCceEEEE---CCEEEEEeCC------cHHHHHH----HHHHHHHHHHHHhcCCCCCcceEEec----C--
Confidence 45678899999999998 6778888742 1121223 3789998888865 223444444 1
Q ss_pred CCCCCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC-----------------
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK----------------- 948 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~----------------- 948 (1142)
..++||||++|.++..... ..++..+...++.+++..|..||+.
T Consensus 101 ------------~~~lvme~i~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~ 161 (320)
T 3r70_A 101 ------------DRFNIMKYIKGERITYEQY-------HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKK 161 (320)
T ss_dssp ------------SSCEEEECCCCBCCCHHHH-------TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHH
T ss_pred ------------CcEEEEeecCCcccccccc-------ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccch
Confidence 1289999999988864321 1356677777888888888888842
Q ss_pred ----------------------------------------------CccccCCCCCCeeeccccccCCCCCeEEEeecCC
Q 001142 949 ----------------------------------------------HIMHRDIKSENILIDLERKKADGKPVVKLCDFDR 982 (1142)
Q Consensus 949 ----------------------------------------------gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGl 982 (1142)
.++|+|++|.|||++.+ ..+.|+||+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~-------~~~~~iD~~~ 234 (320)
T 3r70_A 162 DKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNN-------RLFGVIDFGD 234 (320)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETT-------EEEEECCCTT
T ss_pred HHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECC-------ceEEEECCcc
Confidence 23999999999999875 4579999999
Q ss_pred ccc
Q 001142 983 AVP 985 (1142)
Q Consensus 983 A~~ 985 (1142)
+..
T Consensus 235 ~~~ 237 (320)
T 3r70_A 235 FNV 237 (320)
T ss_dssp CEE
T ss_pred ccc
Confidence 864
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.22 E-value=5e-07 Score=94.08 Aligned_cols=90 Identities=14% Similarity=0.109 Sum_probs=61.6
Q ss_pred hhhhcCCCCCcEEEccCCCCCc-----cCcccCCCCCCCEEEccCCCCCc-----cchhhcCCCCCCEEEc--cCCCCCc
Q 001142 157 LSEIAGLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKV--ANNKLVE 224 (1142)
Q Consensus 157 p~~l~~L~~L~~L~Ls~N~L~~-----IP~~l~~L~~L~~L~Ls~N~L~~-----lP~~l~~L~~L~~L~L--s~N~Ls~ 224 (1142)
...+...++|+.|+|++|.|+. +...+...++|++|+|++|.|+. |...+...++|+.|+| ++|.|+.
T Consensus 58 ~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 58 AEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 3445566677777777777762 33444555678888888888872 4566777777888888 7788862
Q ss_pred -----cCccccCCCCCCEEeCcCCcCC
Q 001142 225 -----LPSGLYLLQRLENLDLSNNRLT 246 (1142)
Q Consensus 225 -----IP~~l~~L~~L~~L~Ls~N~Ls 246 (1142)
|...+...++|+.|+|++|.+.
T Consensus 138 ~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 138 NVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4455555677888888888764
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.20 E-value=2.3e-07 Score=102.39 Aligned_cols=78 Identities=24% Similarity=0.212 Sum_probs=62.7
Q ss_pred cCCCCCcEEEccCCCCCccC---cccCCCCCCCEEEccCCCCCccchhhcCCC--CCCEEEccCCCCC-ccCc-------
Q 001142 161 AGLKCLTKLSVCHFSIRYLP---PEIGCLSNLEQLDLSFNKMKYLPTEICYLK--ALISLKVANNKLV-ELPS------- 227 (1142)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~IP---~~l~~L~~L~~L~Ls~N~L~~lP~~l~~L~--~L~~L~Ls~N~Ls-~IP~------- 227 (1142)
.++++|+.|+|++|+|+.++ ..+..+++|+.|+|++|+|+.+ ..+..+. +|+.|+|++|.|. .+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~ 245 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISA 245 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcCccccCcchhHHHH
Confidence 56889999999999998654 5567899999999999999977 3344444 8999999999997 5663
Q ss_pred cccCCCCCCEEe
Q 001142 228 GLYLLQRLENLD 239 (1142)
Q Consensus 228 ~l~~L~~L~~L~ 239 (1142)
.+..+++|+.||
T Consensus 246 il~~~P~L~~LD 257 (267)
T 3rw6_A 246 IRERFPKLLRLD 257 (267)
T ss_dssp HHHHCTTCCEES
T ss_pred HHHHCcccCeEC
Confidence 256689999885
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.02 E-value=5.1e-06 Score=81.69 Aligned_cols=72 Identities=19% Similarity=0.166 Sum_probs=61.6
Q ss_pred CEEEccCCCCC--ccCccccCCCCCCEEeCcCCcCCCCCcccccCCCCCCEEEccCCCCCCCCCCCchhhccCCCC
Q 001142 213 ISLKVANNKLV--ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGN 286 (1142)
Q Consensus 213 ~~L~Ls~N~Ls--~IP~~l~~L~~L~~L~Ls~N~Ls~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~n 286 (1142)
..++.+++.|+ .||..+. .+|+.|+|++|+|+.+++..|..+++|+.|+|++|+|.|.|.+-.+..|.....
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~wl~~~~ 84 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAWLAGRP 84 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHHHHTSS
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHHHHhCc
Confidence 47888899988 8887655 469999999999999999999999999999999999999999877666665443
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=97.98 E-value=4.1e-05 Score=85.91 Aligned_cols=138 Identities=16% Similarity=0.149 Sum_probs=87.1
Q ss_pred eeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCC---CccceeeeEecCCCCCCC
Q 001142 812 CDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS---CIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 812 ~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp---NIVkl~g~~~~~~~~~~~ 888 (1142)
.+.++.|....||+. +..+++|+.. ....... +.+|+++|+.+.+. .+.+++.+.....
T Consensus 24 v~~l~~G~~n~v~~v---g~~~VlR~~~------~~~~~~~----~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~----- 85 (306)
T 3tdw_A 24 VESLGEGFRNYAILV---NGDWVFRFPK------SQQGADE----LNKEIQLLPLLVGCVKVNIPQYVYIGKRSD----- 85 (306)
T ss_dssp EEEEEECSSEEEEEE---TTTEEEEEES------SHHHHHH----HHHHHHHHHHHTTTCSSBCCCEEEEEECTT-----
T ss_pred eeecCCCcceeEEEE---CCEEEEEecC------CchHHHH----HHHHHHHHHHHHhcCCCCCCCeEeecccCC-----
Confidence 456789999999988 5778888732 1222233 37999999999642 2456666554211
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh---------------------
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS--------------------- 947 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs--------------------- 947 (1142)
...++||||++|.+|....-. .++......++.+++..|..||+
T Consensus 86 --------g~~~~v~e~i~G~~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~ 150 (306)
T 3tdw_A 86 --------GNPFVGYRKVQGQILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKIL 150 (306)
T ss_dssp --------SCEEEEEECCCSEECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHH
T ss_pred --------CceEEEEeccCCeECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHH
Confidence 124899999998877653211 13444444444444444444443
Q ss_pred ---------------------------------------CCccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 948 ---------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 948 ---------------------------------------~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
..++|+|++|.|||++.+. .....+.|+||+.+..
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~---~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 151 LLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNS---RQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTC---SSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCC---CCCceEEEEehhhcCC
Confidence 1469999999999998620 0013458999998854
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.92 E-value=6.9e-05 Score=81.73 Aligned_cols=131 Identities=15% Similarity=0.136 Sum_probs=86.5
Q ss_pred eeecccCce-EEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCCCCC
Q 001142 813 DEAGKSVSS-SLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWLPSA 888 (1142)
Q Consensus 813 ~~LG~GsfG-~Vy~a~~~--~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~~~~~ 888 (1142)
+.+..|.+| .||+.... +..+.+|+... .....+ .+|..+|+.+. +--+.++++++.+.+
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-------~~~~~~----~~E~~~l~~l~~~vPVP~v~~~~~~~~----- 93 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG-------SVANDV----TDEMVRLNWLTAFMPLPTIKHFIRTPD----- 93 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET-------HHHHHH----HHHHHHHHHHTTTSCCCCEEEEEEETT-----
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC-------CCHhHH----HHHHHHHHHhccCCCcCeEEEEEEECC-----
Confidence 345556665 68987653 45678887531 122233 68999998885 444677888776543
Q ss_pred CCCCccccceEEEEEeccCCCCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC--------------------
Q 001142 889 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-------------------- 948 (1142)
Q Consensus 889 ~~~~~~~~~~~~LVmEy~~ggSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs~-------------------- 948 (1142)
..++|||+++|.++.+..... ......++.+++..|..||..
T Consensus 94 ---------~~~lvme~l~G~~~~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~ 155 (272)
T 4gkh_A 94 ---------DAWLLTTAIPGKTAFQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQS 155 (272)
T ss_dssp ---------EEEEEEECCCSEEHHHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHH
T ss_pred ---------eEEEEEEeeCCccccccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHH
Confidence 349999999988887765431 112234455555555555531
Q ss_pred --------------------------------------CccccCCCCCCeeeccccccCCCCCeEEEeecCCcc
Q 001142 949 --------------------------------------HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 984 (1142)
Q Consensus 949 --------------------------------------gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~ 984 (1142)
.++|+|+.+.|||++.+ ..+-|+||+.+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~-------~~~~viDwe~a~ 222 (272)
T 4gkh_A 156 RMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEG-------KLIGCIDVGRVG 222 (272)
T ss_dssp HHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETT-------EEEEECCCTTCE
T ss_pred HHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECC-------eEEEEEECcccc
Confidence 27899999999999865 456799999874
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.64 E-value=0.00013 Score=83.96 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=53.4
Q ss_pred ceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCC--ccceeeeEecCCCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC--IVEMYGHKISSKWLPS 887 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpN--IVkl~g~~~~~~~~~~ 887 (1142)
...+.++.|.+..+|+....+..+.+|+... . . .+ .+|+.++..+.... +.+++++.....
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~-----~-~---~~----~~E~~~l~~L~~~gvpvP~vl~~~~~~~---- 106 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVGGRGYVLRVNSC-----A-D---GF----YKDRYVYRHFASAALPIPEVLDIGEFSE---- 106 (362)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEESC-----C-H---HH----HHHHHHHHHHCCSSSCCCCEEEEEESSS----
T ss_pred ceEEECCCCCcceEEEEEECCcEEEEEeCCc-----h-h---hH----HHHHHHHHHHHhcCCCCceEEEeccCCC----
Confidence 4567799999999999988888888887521 1 1 23 68888888886433 456666655421
Q ss_pred CCCCCccccceEEEEEeccCCCCH
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSV 911 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL 911 (1142)
...++||||++|.++
T Consensus 107 ---------g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 107 ---------SLTYCISRRAQGVTL 121 (362)
T ss_dssp ---------SCEEEEEECCCSEET
T ss_pred ---------CCeEEEEEecCCCCc
Confidence 134999999997544
No 423
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.49 E-value=0.00028 Score=78.68 Aligned_cols=76 Identities=20% Similarity=0.161 Sum_probs=53.5
Q ss_pred ceeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCC---CccceeeeEecCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS---CIVEMYGHKISSKWL 885 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~-~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp---NIVkl~g~~~~~~~~ 885 (1142)
.-.+.||.|.++.||+++.. +..+++|+.... .......+ .+|++.|+.+.+. .+.+++++..
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~----~~~~~~~~----~~E~~~L~~L~~~~~v~vP~v~~~~~----- 84 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDD----APALDGLF----RAEALGLDWLGRSFGSPVPQVAGWDD----- 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTT----CCCCTTHH----HHHHHHHHHHTCSTTCCSCCEEEEET-----
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCC----CcchhHHH----HHHHHHHHHHHhcCCCCcCeEEEecC-----
Confidence 34678999999999999874 567888874321 11111223 7899999999764 5777776531
Q ss_pred CCCCCCCccccceEEEEEeccCCCCH
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGSV 911 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggSL 911 (1142)
.++||||++|+++
T Consensus 85 -------------~~lvme~l~g~~~ 97 (288)
T 3d1u_A 85 -------------RTLAMEWVDERPP 97 (288)
T ss_dssp -------------TEEEEECCCCCCC
T ss_pred -------------cEEEEEecccCCC
Confidence 1899999998763
No 424
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.46 E-value=0.00016 Score=82.30 Aligned_cols=86 Identities=10% Similarity=-0.011 Sum_probs=51.6
Q ss_pred ceeeee-cccCceEEEEEEEC--------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C--CCccceee
Q 001142 810 SSCDEA-GKSVSSSLFRCKFG--------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H--SCIVEMYG 877 (1142)
Q Consensus 810 ~l~~~L-G~GsfG~Vy~a~~~--------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H--pNIVkl~g 877 (1142)
...+.| +.|....+|+.... +..+.+|+........ ...... +.+|+.+++.+. + -.+.++++
T Consensus 23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~-~~~~~~----~~~E~~~l~~L~~~~~vpvP~v~~ 97 (357)
T 3ats_A 23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVP-VFPTYR----LDHQFEVIRLVGELTDVPVPRVRW 97 (357)
T ss_dssp EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCC-SSSCCC----HHHHHHHHHHHHHHCCSCCCCEEE
T ss_pred EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccc-cCchhH----HHHHHHHHHHHhhcCCCCCCcEEE
Confidence 345778 89999999998764 5566777632111000 000112 267888888884 3 35677777
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeccCCCCH
Q 001142 878 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSV 911 (1142)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~LVmEy~~ggSL 911 (1142)
+..+.... ...++||||++|..+
T Consensus 98 ~~~~~~~~-----------g~~~~v~e~l~G~~l 120 (357)
T 3ats_A 98 IETTGDVL-----------GTPFFLMDYVEGVVP 120 (357)
T ss_dssp EECSSTTT-----------SSCEEEEECCCCBCC
T ss_pred EccCCCcc-----------CCceEEEEecCCCCh
Confidence 76543211 123899999997654
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.35 E-value=0.0019 Score=72.31 Aligned_cols=30 Identities=20% Similarity=0.339 Sum_probs=26.2
Q ss_pred CCccccCCCCCCeeeccccccCCCCCeEEEeecCCcc
Q 001142 948 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 984 (1142)
Q Consensus 948 ~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~ 984 (1142)
.+++|+|+++.|||++.+ +.+.|+||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~-------~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGEN-------EQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGG-------GCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCC-------CcEEEEehhhcc
Confidence 579999999999999765 579999999874
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.16 E-value=0.00076 Score=78.12 Aligned_cols=82 Identities=12% Similarity=0.005 Sum_probs=45.4
Q ss_pred eeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C-CC-ccceeeeEecCCCC
Q 001142 811 SCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H-SC-IVEMYGHKISSKWL 885 (1142)
Q Consensus 811 l~~~LG~GsfG~Vy~a~~--~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H-pN-IVkl~g~~~~~~~~ 885 (1142)
..+.||.|.++.||+++. .+..+++|...-...... ........++..|.++++.+. + |. +.+++.+. ...
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~-~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~- 109 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVG-ESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEM- 109 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC--------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTT-
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccC-CCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCc-
Confidence 457899999999999964 456788886431110000 000001112357888888774 2 33 34555432 111
Q ss_pred CCCCCCCccccceEEEEEeccCCC
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGG 909 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~gg 909 (1142)
.++||||+++.
T Consensus 110 -------------~~lvmE~l~g~ 120 (397)
T 2olc_A 110 -------------AVTVMEDLSHL 120 (397)
T ss_dssp -------------TEEEECCCTTS
T ss_pred -------------cEEEEEeCCCc
Confidence 28999999863
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.77 E-value=0.0017 Score=63.57 Aligned_cols=55 Identities=18% Similarity=0.234 Sum_probs=28.9
Q ss_pred EEEccCCCCC-CCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCC
Q 001142 45 VIDVSGKTVD-FPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEIN 104 (1142)
Q Consensus 45 ~LdLs~N~L~-~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~ 104 (1142)
++|.++++|+ ..+|..+. .+|+.|+|++|+|+.||. .|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp-----~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP-----VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC-----TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC-----cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666666665 12222111 345666666666666644 3455556666666666553
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.74 E-value=0.0015 Score=68.57 Aligned_cols=109 Identities=15% Similarity=0.124 Sum_probs=74.5
Q ss_pred hcCCCCCcEEEccCC-CCCc-----cCcccCCCCCCCEEEccCCCCC-----ccchhhcCCCCCCEEEccCCCCC-----
Q 001142 160 IAGLKCLTKLSVCHF-SIRY-----LPPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLV----- 223 (1142)
Q Consensus 160 l~~L~~L~~L~Ls~N-~L~~-----IP~~l~~L~~L~~L~Ls~N~L~-----~lP~~l~~L~~L~~L~Ls~N~Ls----- 223 (1142)
+.+-+.|+.|+|++| +|.. |-..+..-+.|+.|+|++|+|. .|-..+..-+.|+.|+|++|.|+
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 345567888888875 7652 3344555577899999999987 34455666678999999999987
Q ss_pred ccCccccCCCCCCEEeCcCCcC---CCC----CcccccCCCCCCEEEccCCC
Q 001142 224 ELPSGLYLLQRLENLDLSNNRL---TSL----GSLDLCLMHNLQNLNLQYNK 268 (1142)
Q Consensus 224 ~IP~~l~~L~~L~~L~Ls~N~L---s~~----~p~~l~~L~~L~~L~Ls~N~ 268 (1142)
.|-..+..-+.|+.|+|++|.. ... +...+..-+.|..|+|+.|.
T Consensus 117 ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 3445566566799999987643 321 12234455788888887664
No 429
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.65 E-value=0.0071 Score=67.16 Aligned_cols=71 Identities=13% Similarity=0.117 Sum_probs=42.2
Q ss_pred eeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCCCCCCC
Q 001142 812 CDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWLPSADG 890 (1142)
Q Consensus 812 ~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~~~~~~~~~ 890 (1142)
.+.|+.|....+|++ ..+.+|+..... ....+. .+|+.+++.+. +.-..+++++..+.
T Consensus 23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~-----~~~~~r----~~E~~~l~~l~~~g~~P~~~~~~~~~-------- 81 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA----GDLCLRIPGKGT-----EEYINR----ANEAVAAREAAKAGVSPEVLHVDPAT-------- 81 (301)
T ss_dssp CEEEESCSSEEEEEE----TTEEEEEECC---------CCCH----HHHHHHHHHHHHTTSSCCEEEECTTT--------
T ss_pred eeEcCCcccccccee----eeEEEECCCCCc-----cceeCH----HHHHHHHHHHHHcCCCCceEEEECCC--------
Confidence 688999999999998 667888754211 111111 36777777664 22224555443211
Q ss_pred CCccccceEEEEEecc-CCCCH
Q 001142 891 NPEHHLLQSAIFMEYV-KGGSV 911 (1142)
Q Consensus 891 ~~~~~~~~~~LVmEy~-~ggSL 911 (1142)
-++||||+ +|.+|
T Consensus 82 --------~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 82 --------GVMVTRYIAGAQTM 95 (301)
T ss_dssp --------CCEEEECCTTCEEC
T ss_pred --------CEEEEeecCCCccC
Confidence 17899999 65433
No 430
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.65 E-value=0.0062 Score=71.17 Aligned_cols=32 Identities=9% Similarity=0.351 Sum_probs=27.2
Q ss_pred HhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 946 HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 946 Hs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
+...++|||++|.|||++.+ . +.++||+.+..
T Consensus 230 ~~~~liHGDl~~~Nil~~~~-------~-~~lID~e~a~~ 261 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQD-------S-TQVIDPEFSFY 261 (420)
T ss_dssp BCCEEECSCCSGGGEEECSS-------C-EEECCCTTCEE
T ss_pred CCCeEEecCCCCCcEEEeCC-------C-CEEEeCccccc
Confidence 35689999999999999865 3 99999998864
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.50 E-value=0.0016 Score=68.28 Aligned_cols=86 Identities=13% Similarity=0.083 Sum_probs=39.0
Q ss_pred CCCCCCCCEEEccCC-CCCCCCcc-cccCCCCCCCccEEEeecCCCCc-----cCccccCCcCCcEEEccCCCCC-----
Q 001142 37 VNDDDDDSVIDVSGK-TVDFPLIE-SYGNRGGDNSVEGLYLYKNVLNL-----IPKSVGRYEKLRNLKFFGNEIN----- 104 (1142)
Q Consensus 37 f~~l~~L~~LdLs~N-~L~~~~p~-~~~~l~~L~~L~~L~Ls~N~Lt~-----iP~~l~~L~~L~~L~Ls~N~L~----- 104 (1142)
+.+.+.|+.|+|++| +|...-.. ....+..-+.|+.|+|++|.|+. |-..+..-+.|+.|+|++|.|+
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344556666666664 55321000 01112223456666666666651 2223333345666666666654
Q ss_pred cCchhhcCCCCCCEEEcc
Q 001142 105 LFPSEVGNLLGLECLQIK 122 (1142)
Q Consensus 105 ~lP~~l~~L~~L~~L~Ls 122 (1142)
.|-..+..-+.|+.|+|+
T Consensus 117 ala~aL~~N~tL~~L~L~ 134 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKAD 134 (197)
T ss_dssp HHHHHTTTTCCCSEEECC
T ss_pred HHHHHHhhCCceeEEECC
Confidence 122333333445555554
No 432
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.37 E-value=0.0014 Score=67.68 Aligned_cols=80 Identities=14% Similarity=0.178 Sum_probs=33.9
Q ss_pred CCCEEEccCCCCCcc-chhhcCCCCCCEEEccCCC-CCc-cCccccCC----CCCCEEeCcCC-cCCCCCcccccCCCCC
Q 001142 188 NLEQLDLSFNKMKYL-PTEICYLKALISLKVANNK-LVE-LPSGLYLL----QRLENLDLSNN-RLTSLGSLDLCLMHNL 259 (1142)
Q Consensus 188 ~L~~L~Ls~N~L~~l-P~~l~~L~~L~~L~Ls~N~-Ls~-IP~~l~~L----~~L~~L~Ls~N-~Ls~~~p~~l~~L~~L 259 (1142)
+|+.|||+++.|+.. -..+..+++|+.|+|+++. |+. -=..+..+ ++|+.|+|+++ +||...-..+..+++|
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L 141 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNL 141 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCC
Confidence 345555555544421 1233445555555555542 431 00122222 23555555554 2443222234445555
Q ss_pred CEEEccCC
Q 001142 260 QNLNLQYN 267 (1142)
Q Consensus 260 ~~L~Ls~N 267 (1142)
+.|+|++.
T Consensus 142 ~~L~L~~c 149 (176)
T 3e4g_A 142 KYLFLSDL 149 (176)
T ss_dssp CEEEEESC
T ss_pred CEEECCCC
Confidence 55555544
No 433
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.11 E-value=0.045 Score=61.51 Aligned_cols=76 Identities=12% Similarity=0.040 Sum_probs=55.3
Q ss_pred eeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC---CCCccceeeeEecCCCCCC
Q 001142 811 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 811 l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~---HpNIVkl~g~~~~~~~~~~ 887 (1142)
-.+.|+.|.+..+|+....+..+.+|+.... .... +..|++.|+.|. ...+.+++++....+
T Consensus 40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~-------~~~~----~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g---- 104 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDEVQTVFVKINERS-------YRSM----FRAEADQLALLAKTNSINVPLVYGIGNSQG---- 104 (312)
T ss_dssp EEEEECCSSSSEEEEEESSSCEEEEEEEEGG-------GHHH----HHHHHHHHHHHHHTTSSBCCCEEEEEECSS----
T ss_pred eeEEeCCccceeeeEEEECCCeEEEEeCCcc-------cHHH----HHHHHHHHHHHHhhCCCCcceEEEEeecCC----
Confidence 4577899999999999887778888875421 1222 368888888874 356788888765432
Q ss_pred CCCCCccccceEEEEEeccCCCCH
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSV 911 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL 911 (1142)
..++||||++|..+
T Consensus 105 ----------~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 105 ----------HSFLLLEALNKSKN 118 (312)
T ss_dssp ----------EEEEEEECCCCCCC
T ss_pred ----------ceEEEEEeccCCCC
Confidence 34999999998753
No 434
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=95.98 E-value=0.019 Score=63.96 Aligned_cols=150 Identities=15% Similarity=0.131 Sum_probs=76.8
Q ss_pred ceeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C-CCccceeeeEecCCCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H-SCIVEMYGHKISSKWLPS 887 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H-pNIVkl~g~~~~~~~~~~ 887 (1142)
.-.+.|+.|....+|++...+..+.+|+..-. .....+ ..|+.++..+. + -.+.+++... +...+
T Consensus 25 ~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~------~~~~~l----~~e~~~l~~L~~~g~~vP~~~~~~-~g~~~-- 91 (322)
T 2ppq_A 25 TSYKGIAEGVENSNFLLHTTKDPLILTLYEKR------VEKNDL----PFFLGLMQHLAAKGLSCPLPLPRK-DGELL-- 91 (322)
T ss_dssp EEEEEECC---EEEEEEEESSCCEEEEEECC---------CCHH----HHHHHHHHHHHHTTCCCCCBCCBT-TCCSC--
T ss_pred eEeeccCCCcccceEEEEeCCccEEEEEeCCC------CCHHHH----HHHHHHHHHHHHCCCCCCcccCCC-CCCEE--
Confidence 44577888999999999887667888875421 011122 45777776664 2 1133333211 00000
Q ss_pred CCCCCccccceEEEEEeccCCCCHH-----------HH---HHHHhcc-CCC---CCC---HHHHHH------------H
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGGSVK-----------NY---IEKLSET-GEK---HVS---VKLALF------------I 934 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~ggSL~-----------~~---l~~~~~~-~~~---~ls---~~~i~~------------I 934 (1142)
.......++||+|++|..+. .. ++..... ... ... |..... +
T Consensus 92 -----~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l 166 (322)
T 2ppq_A 92 -----GELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGL 166 (322)
T ss_dssp -----EEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTH
T ss_pred -----EEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhh
Confidence 00012358999999975421 11 1211000 000 011 111000 0
Q ss_pred HHHHHHHHHHHHh-------CCccccCCCCCCeeeccccccCCCCCeEEEeecCCcc
Q 001142 935 AQDVAAALVELHS-------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 984 (1142)
Q Consensus 935 a~qIa~gL~yLHs-------~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~ 984 (1142)
...+...+++++. .+++|+|+.+.|||++.+ ..+.|+||+.+.
T Consensus 167 ~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~-------~~~~lIDf~~a~ 216 (322)
T 2ppq_A 167 REEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGD-------ELSGLIDFYFAC 216 (322)
T ss_dssp HHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETT-------EEEEECCCTTCE
T ss_pred HHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCC-------ceEEEecchhcc
Confidence 1123445556653 379999999999999865 445799999874
No 435
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.79 E-value=0.026 Score=63.33 Aligned_cols=35 Identities=34% Similarity=0.468 Sum_probs=26.7
Q ss_pred CCccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 948 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 948 ~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
..++|||+.+.|||++.+. .+...+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~---~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPER---EGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTS---CGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCc---CCCCCeEEEeCCCcCc
Confidence 4799999999999997631 0014689999998864
No 436
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.66 E-value=0.0059 Score=62.91 Aligned_cols=82 Identities=13% Similarity=0.179 Sum_probs=55.6
Q ss_pred CCCcEEEccCCCCCcc-CcccCCCCCCCEEEccCCC-CCc-cchhhcCC----CCCCEEEccCC-CCC--ccCccccCCC
Q 001142 164 KCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNK-MKY-LPTEICYL----KALISLKVANN-KLV--ELPSGLYLLQ 233 (1142)
Q Consensus 164 ~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~-L~~-lP~~l~~L----~~L~~L~Ls~N-~Ls--~IP~~l~~L~ 233 (1142)
-.|+.|+++++.|+.. -..+..+++|+.|+|+++. |+. --..+..+ ++|+.|+|+++ +|+ .+ ..+..++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl-~~L~~~~ 139 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGI-IALHHFR 139 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHH-HHGGGCT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHH-HHHhcCC
Confidence 3577888888877621 1345778888888888874 662 12445543 36888888887 477 34 3566788
Q ss_pred CCCEEeCcCCc-CC
Q 001142 234 RLENLDLSNNR-LT 246 (1142)
Q Consensus 234 ~L~~L~Ls~N~-Ls 246 (1142)
+|+.|+|+++. ++
T Consensus 140 ~L~~L~L~~c~~It 153 (176)
T 3e4g_A 140 NLKYLFLSDLPGVK 153 (176)
T ss_dssp TCCEEEEESCTTCC
T ss_pred CCCEEECCCCCCCC
Confidence 88888888874 44
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.47 E-value=0.068 Score=63.30 Aligned_cols=72 Identities=18% Similarity=0.126 Sum_probs=45.1
Q ss_pred eeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCc-cceeeeEecCCCCCC
Q 001142 811 SCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI-VEMYGHKISSKWLPS 887 (1142)
Q Consensus 811 l~~~LG~GsfG~Vy~a~~~~--~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI-Vkl~g~~~~~~~~~~ 887 (1142)
-.+.|+.|-...+|++...+ ..+.+|+..-. . .. .-+. .+|..++..|...++ .++++.+. +
T Consensus 112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~-~-~~---~idR----~~E~~vl~~L~~~gl~P~ll~~~~--~---- 176 (458)
T 2qg7_A 112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPK-T-DE---IINR----EREKKISCILYNKNIAKKIYVFFT--N---- 176 (458)
T ss_dssp EEEEECC--CEEEEEEEETTTTEEEEEEEECC--C-CS---CSCH----HHHHHHHHHHTTSSSBCCEEEEET--T----
T ss_pred EEEEcCCCeEeEEEEEEECCCCceEEEEECCCC-h-hh---hcCH----HHHHHHHHHHHhcCCCCCEEEEeC--C----
Confidence 35678899999999999876 67788875211 1 00 0001 478888888864344 56666652 1
Q ss_pred CCCCCccccceEEEEEeccCCC
Q 001142 888 ADGNPEHHLLQSAIFMEYVKGG 909 (1142)
Q Consensus 888 ~~~~~~~~~~~~~LVmEy~~gg 909 (1142)
.+||||++|.
T Consensus 177 ------------G~v~e~I~G~ 186 (458)
T 2qg7_A 177 ------------GRIEEFMDGY 186 (458)
T ss_dssp ------------EEEEECCCSE
T ss_pred ------------eEEEEeeCCc
Confidence 4699999864
No 438
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.24 E-value=0.018 Score=65.85 Aligned_cols=29 Identities=24% Similarity=0.398 Sum_probs=24.3
Q ss_pred CccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 949 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 949 gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
+++|+|+.+.|||++.+ .+.|+||..+..
T Consensus 213 ~l~HgDl~~~Nil~~~~--------~~~lID~e~a~~ 241 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNK--------CLRLIDFEYSGF 241 (369)
T ss_dssp EEECSCCCGGGEEECC---------CEEECCCTTCEE
T ss_pred EEEeCCCCcccEEecCC--------cEEEEEecCCCC
Confidence 69999999999999753 489999998853
No 439
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=94.98 E-value=0.17 Score=55.59 Aligned_cols=75 Identities=19% Similarity=0.111 Sum_probs=48.8
Q ss_pred ceeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C--CCccceeeeEecCCCC
Q 001142 810 SSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H--SCIVEMYGHKISSKWL 885 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~-~~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H--pNIVkl~g~~~~~~~~ 885 (1142)
.-.+.+|.|..+.||+.+. +++.+.+|+..-... ..... +..|++.|+.|. . --+.+++++..
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~----~~~~~----~~~Ea~~L~~L~~~~~vpvP~v~~~~~----- 84 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP----ALDGL----FRAEALGLDWLGRSFGSPVPQVAGWDD----- 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC----CCTTH----HHHHHHHHHHHTCSTTCCSCCEEEEET-----
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc----chhhH----HHHHHHHHHHHHhhCCCCcceEEeccC-----
Confidence 5568899999999999997 466788886432211 11112 367988888874 2 23455555421
Q ss_pred CCCCCCCccccceEEEEEeccCCCC
Q 001142 886 PSADGNPEHHLLQSAIFMEYVKGGS 910 (1142)
Q Consensus 886 ~~~~~~~~~~~~~~~LVmEy~~ggS 910 (1142)
.++||||++++.
T Consensus 85 -------------~~lv~e~l~~~~ 96 (288)
T 3f7w_A 85 -------------RTLAMEWVDERP 96 (288)
T ss_dssp -------------TEEEEECCCCCC
T ss_pred -------------ceEEEEeecccC
Confidence 189999998763
No 440
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=94.62 E-value=0.039 Score=63.70 Aligned_cols=143 Identities=18% Similarity=0.230 Sum_probs=77.5
Q ss_pred eeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecC
Q 001142 813 DEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS 882 (1142)
Q Consensus 813 ~~LG~GsfG~Vy~a~~~---------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~~~ 882 (1142)
+.|..|-...+|++... +..+.+++. .. .......+ .+|.++++.+. +.-..++++++.+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~-g~----~~~~~~~~----~rE~~vl~~L~~~gv~P~ll~~~~~- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLY-GA----ILQGVDSL----VLESVMFAILAERSLGPQLYGVFPE- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEEC-C-------CCHHHH----HHHHHHHHHHHHTTSSCCEEEEETT-
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEEC-CC----ccchHHHH----HHHHHHHHHHHhcCCCCeEEEEcCC-
Confidence 56777888889998874 245666653 11 11112222 57888888874 3334566665431
Q ss_pred CCCCCCCCCCccccceEEEEEeccCCCCHH--------------HHHHHHhccC---CCCC--CHHHHHHHHHHHHH---
Q 001142 883 KWLPSADGNPEHHLLQSAIFMEYVKGGSVK--------------NYIEKLSETG---EKHV--SVKLALFIAQDVAA--- 940 (1142)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~LVmEy~~ggSL~--------------~~l~~~~~~~---~~~l--s~~~i~~Ia~qIa~--- 940 (1142)
.+||||++|.+|. ..+.+..... .... -+.++.++..++..
T Consensus 126 -----------------g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~ 188 (379)
T 3feg_A 126 -----------------GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPP 188 (379)
T ss_dssp -----------------EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCC
T ss_pred -----------------ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccC
Confidence 4899999875331 2222221111 1112 24556666554422
Q ss_pred ----------------HHHHHH----h----CCccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 941 ----------------ALVELH----S----KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 941 ----------------gL~yLH----s----~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
.+..|. . ..++|+|+.+.|||++.+. ...+.+.++||..|..
T Consensus 189 ~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~---~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 189 TGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEP---ENADSLMLVDFEYSSY 254 (379)
T ss_dssp CSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC------CCEEECCCTTCEE
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCC---CccCcEEEEecccCCc
Confidence 233333 2 2599999999999997641 0114689999998853
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.19 E-value=0.31 Score=51.75 Aligned_cols=99 Identities=15% Similarity=0.104 Sum_probs=60.3
Q ss_pred CCHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCCeeeccccccCCCCCeEEEeecCCccccc
Q 001142 909 GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLR 987 (1142)
Q Consensus 909 gSL~~~l~~~~~~~~~~ls~~~i~~Ia~qIa~gL~yLHs-~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~l~ 987 (1142)
-||.+.++.+ +.++++++++.++.|.+.+|.-+-. +.-..+=+-|..|++..+ |.|-+.+ +.+.
T Consensus 33 vSL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~d-------G~V~f~~-~~s~--- 97 (229)
T 2yle_A 33 LSLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRD-------GAVTLAP-AADD--- 97 (229)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETT-------SCEEECC-C------
T ss_pred ccHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecC-------Cceeccc-cccc---
Confidence 3899999863 4679999999999999999877621 111122233567777666 5555442 1110
Q ss_pred ccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001142 988 SFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1046 (1142)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVwSLGviL~ELLtG 1046 (1142)
.....+.|||... ...+.+.=|||+|++||.-+--
T Consensus 98 -------------------~~~~~~~~pe~~~-----~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 98 -------------------AGEPPPVAGKLGY-----SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp ----------------------------CCSS-----SSSCHHHHHHHHHHHHHHHHTT
T ss_pred -------------------ccccCCCChhhcc-----ccchHHHHHHHHHHHHHHHhhc
Confidence 0122366787653 2446888999999999988753
No 442
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=93.96 E-value=0.25 Score=57.89 Aligned_cols=71 Identities=15% Similarity=0.220 Sum_probs=45.4
Q ss_pred eeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001142 811 SCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 880 (1142)
Q Consensus 811 l~~~LG~GsfG~Vy~a~~~---------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~ 880 (1142)
-.+.|+.|....||++... +..+.+|+.... .. ...+ .+|+.+++.+. +.-..++++.+.
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~--~~~l----i~E~~~l~~L~~~g~~P~l~~~~~ 146 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ET--ESHL----VAESVIFTLLSERHLGPKLYGIFS 146 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CC--HHHH----HHHHHHHHHHHHTTSSSCEEEEET
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----Cc--HHHH----HHHHHHHHHHHhCCCCCcEEEEeC
Confidence 3467888999999999874 356777775211 11 0222 46888888875 333356666542
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGG 909 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~gg 909 (1142)
+ ++||||++|.
T Consensus 147 --~----------------g~v~e~l~G~ 157 (429)
T 1nw1_A 147 --G----------------GRLEEYIPSR 157 (429)
T ss_dssp --T----------------EEEECCCCEE
T ss_pred --C----------------CEEEEEeCCc
Confidence 1 5899999863
No 443
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=93.17 E-value=0.26 Score=54.73 Aligned_cols=29 Identities=28% Similarity=0.287 Sum_probs=24.2
Q ss_pred CCccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 948 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 948 ~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
..++|+|+++.|||++ + .+.|+||+.+..
T Consensus 195 ~~l~HgD~~~~Nil~~-~--------~~~lIDfe~a~~ 223 (328)
T 1zyl_A 195 VLRLHGDCHAGNILWR-D--------GPMFVDLDDARN 223 (328)
T ss_dssp CEECCSSCSGGGEEES-S--------SEEECCCTTCCE
T ss_pred eeeeeCCCCcccEeEc-C--------CCEEEECCCCCc
Confidence 4689999999999997 2 388999998753
No 444
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=92.74 E-value=0.37 Score=54.43 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=26.6
Q ss_pred CCccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 948 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 948 ~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
..++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~-------~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNE-------ESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGG-------GCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCC-------CeEEEEECCCCee
Confidence 369999999999999865 5689999998764
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=92.70 E-value=0.48 Score=55.45 Aligned_cols=73 Identities=8% Similarity=0.086 Sum_probs=45.2
Q ss_pred eeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001142 811 SCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 880 (1142)
Q Consensus 811 l~~~LG~GsfG~Vy~a~~~---------~~~vAvKi~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkl~g~~~ 880 (1142)
-.+.|..|-...+|++... +..+.+++..-. ....-+. .+|..+++.+. +.-..++++.+.
T Consensus 74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~-----t~~~idR----~~E~~~l~~L~~~gi~P~l~~~~~ 144 (424)
T 3mes_A 74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH-----VGKFYDS----KVELDVFRYLSNINIAPNIIADFP 144 (424)
T ss_dssp EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCC-----C-CCCCH----HHHHHHHHHHHHTTSSCCEEEEET
T ss_pred EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCC-----cchhcCH----HHHHHHHHHHHhcCCCCCEEEEcC
Confidence 4566778999999999876 466777764211 1111111 47888888774 333455665331
Q ss_pred cCCCCCCCCCCCccccceEEEEEeccCCCC
Q 001142 881 SSKWLPSADGNPEHHLLQSAIFMEYVKGGS 910 (1142)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~LVmEy~~ggS 910 (1142)
+ ++||||++|..
T Consensus 145 --~----------------~~I~efI~G~~ 156 (424)
T 3mes_A 145 --E----------------GRIEEFIDGEP 156 (424)
T ss_dssp --T----------------EEEEECCCSEE
T ss_pred --C----------------CEEEEEeCCcc
Confidence 1 78999999754
No 446
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=87.08 E-value=2.7 Score=48.67 Aligned_cols=36 Identities=28% Similarity=0.329 Sum_probs=26.6
Q ss_pred CccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 949 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 949 gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
.++|+|+.+.|||++.+.. ....+.+.|+||..|..
T Consensus 245 v~~H~Dl~~~Nil~~~~~~-~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRE-NSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGG-GCSSSCEEECCCTTCEE
T ss_pred eEEeccCCcccEEEcCCcc-cCcccceEEEeeccCCc
Confidence 5899999999999976411 01124699999998853
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=83.06 E-value=2.1 Score=49.29 Aligned_cols=36 Identities=28% Similarity=0.329 Sum_probs=26.3
Q ss_pred CccccCCCCCCeeeccccccCCCCCeEEEeecCCccc
Q 001142 949 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 985 (1142)
Q Consensus 949 gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA~~ 985 (1142)
.++|+|+.+.|||+..+.. ......+.++||..|..
T Consensus 245 vfcHnDl~~gNil~~~~~~-~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRE-NSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGG-GCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcc-cCcCCeEEEechHhccC
Confidence 3689999999999954311 11226799999999864
No 448
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=80.29 E-value=0.58 Score=51.92 Aligned_cols=46 Identities=30% Similarity=0.504 Sum_probs=39.2
Q ss_pred ccchhhhHHHHHHHhhhccCCCCccccccccccc----CCCccceeEEeeCCch
Q 001142 705 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDF----QPHAWNTILVKKGDSW 754 (1142)
Q Consensus 705 ~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~----~~~~~~~~~~~~~~~~ 754 (1142)
..|+|++-|.||-.||-.++ ||+|.|.||... ..|||..+-+. +.|
T Consensus 177 ~~G~C~d~A~l~val~Ra~G--IPAR~VsGy~~~~~~~~~HAW~Evyl~--ggW 226 (293)
T 3isr_A 177 RAGVCRDFAHLGIALCRALS--IPARYFTGYAFKLNPPDFHACFEAYIG--GNW 226 (293)
T ss_dssp CEECHHHHHHHHHHHHHHTT--CCEEEEEEEETTCSSCCEEEEEEEEET--TEE
T ss_pred CcEehHHHHHHHHHHHHHCC--CCEEEEEEECCCCCCCCeEEEEEEEEC--CcE
Confidence 47999999999999999999 999999999863 46999876654 356
No 449
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=79.99 E-value=0.63 Score=51.37 Aligned_cols=45 Identities=20% Similarity=0.528 Sum_probs=38.7
Q ss_pred ccchhhhHHHHHHHhhhccCCCCcccccccccccCCCccceeEEeeCCch
Q 001142 705 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDFQPHAWNTILVKKGDSW 754 (1142)
Q Consensus 705 ~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 754 (1142)
..|+|++-|.||-.||-.++ ||+|.|-|| ..|+|..+-+.....|
T Consensus 139 r~G~C~d~A~lf~al~Ra~G--IpAR~V~Gy---~~HaW~Evy~~g~~gW 183 (295)
T 2f4m_A 139 RCGRCGEWANCFTLCCRALG--FEARYVWDY---TDHVWTEVYSPSQQRW 183 (295)
T ss_dssp CEESHHHHHHHHHHHHHHTT--CCEEEEEET---TTEEEEEEEETTTTEE
T ss_pred CCEeeHHHHHHHHHHHHHCC--CCEEEEcCC---CCEEEEEEEECCCCeE
Confidence 57999999999999999999 999999998 7999987766543344
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=65.74 E-value=0.65 Score=54.90 Aligned_cols=65 Identities=9% Similarity=0.061 Sum_probs=18.7
Q ss_pred ceeeeecccCceEEEEEEECC--ccEEEEE----EecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001142 810 SSCDEAGKSVSSSLFRCKFGS--ADAAAKV----RTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 881 (1142)
Q Consensus 810 ~l~~~LG~GsfG~Vy~a~~~~--~~vAvKi----~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl~g~~~~ 881 (1142)
.+.+.|| ||.||++.+.. .+||++. +..+...........+ .+|..+++.++|||+++.+++...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~----~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSL----VRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC---------------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccc----cccccccccccccccCCCcceEEe
Confidence 4556676 99999999864 4566621 1121111112222233 688899999999999999988664
No 451
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=52.19 E-value=5.4 Score=44.56 Aligned_cols=45 Identities=16% Similarity=0.349 Sum_probs=38.5
Q ss_pred ccchhhhHHHHHHHhhhccCCCCcccccccccccCCCccceeEEeeCCch
Q 001142 705 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDFQPHAWNTILVKKGDSW 754 (1142)
Q Consensus 705 ~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 754 (1142)
.-|.|.|=|.+|=.+|=.++ +|+|+|.| ..+|+|..+-....+.|
T Consensus 180 r~G~C~e~A~lF~~llRalG--i~aR~V~~---~~~H~W~EV~~~~~~rW 224 (335)
T 1x3z_A 180 RKGRCGEWCNLFTLILKSFG--LDVRYVWN---REDHVWCEYFSNFLNRW 224 (335)
T ss_dssp CEECHHHHHHHHHHHHHTTT--CCEEEEEE---TTTEEEEEEEETTTTEE
T ss_pred CCcChHHHHHHHHHHHHHCC--CCeEEEec---CCCcEEEEEEECCCCCE
Confidence 46999999999999999999 99999987 46899988777655445
No 452
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=46.98 E-value=5.1 Score=49.09 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=29.9
Q ss_pred cccchhhhHHHHHHHhhhccCCCCccccccccc
Q 001142 704 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYL 736 (1142)
Q Consensus 704 ~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~ 736 (1142)
.++|+|+|=|-+|=.+|-.++ ||+|.|.||.
T Consensus 272 ~k~G~C~dfA~~~~~llRalG--IPAR~VsGy~ 302 (687)
T 2q3z_A 272 VKYGQCWVFAAVACTVLRCLG--IPTRVVTNYN 302 (687)
T ss_dssp EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEE
T ss_pred cceeehHHHHHHHHHHHHhCC--CCcEEEeecc
Confidence 789999999999999999999 9999999997
No 453
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=46.14 E-value=4.5 Score=49.52 Aligned_cols=31 Identities=19% Similarity=0.396 Sum_probs=29.5
Q ss_pred cccchhhhHHHHHHHhhhccCCCCccccccccc
Q 001142 704 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYL 736 (1142)
Q Consensus 704 ~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~ 736 (1142)
+++|+|+|=|-+|=.+|=.++ ||+|.|-||.
T Consensus 267 V~~G~C~~fA~~~~~~lR~lG--IPaR~Vtgy~ 297 (692)
T 1vjj_A 267 VRYGQCWVFAGTLNTALRSLG--IPSRVITNFN 297 (692)
T ss_dssp EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEE
T ss_pred ccceeeHHHHHHHHHHHHhCC--CCeeEEcccc
Confidence 579999999999999999999 9999999995
No 454
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=38.65 E-value=8.1 Score=47.55 Aligned_cols=33 Identities=21% Similarity=0.499 Sum_probs=30.7
Q ss_pred ccccchhhhHHHHHHHhhhccCCCCcccccccccc
Q 001142 703 SVQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLD 737 (1142)
Q Consensus 703 ~~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~ 737 (1142)
.+++|.|.|=|-+|=.++=+++ ||||.|.||..
T Consensus 308 PV~~G~C~~fA~v~~~~lR~lG--IPaRvVtgy~s 340 (731)
T 1ex0_A 308 PVRYGQCWVFAGVFNTFLRCLG--IPARIVTNYFS 340 (731)
T ss_dssp CEEEECHHHHHHHHHHHHHHHT--CCEEEEEEEEE
T ss_pred ccceeeehhHHHHHHHHHHhCC--CCeeEEccccc
Confidence 3689999999999999999999 99999999975
No 455
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=35.78 E-value=2.3 Score=33.33 Aligned_cols=29 Identities=21% Similarity=0.074 Sum_probs=11.4
Q ss_pred cceEeeeeccceeeeehhhhh--hHHHHHhh
Q 001142 330 SSSISTVSSSNSRSLTARKSS--KQWKRHHL 358 (1142)
Q Consensus 330 ~~~i~~~~~~~~~~l~~~~~~--~~~~r~~~ 358 (1142)
.+.|++.+.+|++.+.+..+. +.||||+.
T Consensus 10 ~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 10 IPSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 333443333344443333333 24444443
No 456
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=32.02 E-value=1.8 Score=33.88 Aligned_cols=30 Identities=10% Similarity=-0.030 Sum_probs=12.4
Q ss_pred cceEeeeeccceeeeehhhhhh--HHHHHhhH
Q 001142 330 SSSISTVSSSNSRSLTARKSSK--QWKRHHLQ 359 (1142)
Q Consensus 330 ~~~i~~~~~~~~~~l~~~~~~~--~~~r~~~~ 359 (1142)
.+.|++.+.+|++.+++..+.. .||||+.+
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred cceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 4444444444444433333332 44444433
No 457
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=28.58 E-value=17 Score=44.57 Aligned_cols=32 Identities=16% Similarity=0.345 Sum_probs=30.2
Q ss_pred cccchhhhHHHHHHHhhhccCCCCcccccccccc
Q 001142 704 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLD 737 (1142)
Q Consensus 704 ~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~ 737 (1142)
+++|.|.|=|-+|=.++=.++ ||+|.|-||..
T Consensus 267 V~~G~C~~fA~v~~t~lR~lG--IPaR~Vtgy~s 298 (695)
T 1g0d_A 267 VKYGQCWVFAAVACTVLRCLG--IPTRPITNFAS 298 (695)
T ss_dssp EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEEE
T ss_pred ccceeeHHHHHHHHHHHHhCC--CCeeEEccccc
Confidence 579999999999999999999 99999999974
No 458
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=26.49 E-value=51 Score=34.60 Aligned_cols=50 Identities=2% Similarity=-0.136 Sum_probs=40.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCc
Q 001142 925 HVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRA 983 (1142)
Q Consensus 925 ~ls~~~i~~Ia~qIa~gL~yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA 983 (1142)
.++....++++.+|+....+++ .-+|--|.|+||+++.+ +.+++.-.|+-
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL~f~~~-------~~p~i~~RGik 126 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDELFFTRD-------GLPIAKTRGLQ 126 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGEEECTT-------SCEEESCCEET
T ss_pred hcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceEEEcCC-------CCEEEEEccCc
Confidence 4788999999999988775543 34677899999999988 77888877753
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=22.23 E-value=95 Score=28.21 Aligned_cols=48 Identities=13% Similarity=0.112 Sum_probs=26.0
Q ss_pred CCCCcccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeec
Q 001142 26 ANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYK 77 (1142)
Q Consensus 26 ~N~i~~l~~~~f~~l~~L~~LdLs~N~L~~~~p~~~~~l~~L~~L~~L~Ls~ 77 (1142)
...++.|...+|.++.+|+.+.|-.+ ++.+-...| .++.+|+.+.|..
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF---~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMF---SGCTALEKLILTG 52 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSS---TTCTTCCCEEECC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHH---hccCCccEEEEcC
Confidence 34566666677777766666666554 333323223 3335555555544
No 460
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=21.25 E-value=68 Score=33.76 Aligned_cols=50 Identities=6% Similarity=-0.029 Sum_probs=39.4
Q ss_pred CCCHHHHHHHHHHHHHHHH-HHHhCCccccCCCCCCeeeccccccCCCCCeEEEeecCCc
Q 001142 925 HVSVKLALFIAQDVAAALV-ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRA 983 (1142)
Q Consensus 925 ~ls~~~i~~Ia~qIa~gL~-yLHs~gIvHrDLKp~NILld~~~~~~~~~~~vKL~DFGlA 983 (1142)
.++....++++.+|+.... ++ ..-+|--|.|+||+++.+ +.+++.-.|.-
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~-------~~p~i~hRGi~ 131 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRA-------LEPFFLHVGVK 131 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTT-------CCEEESCCEET
T ss_pred hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCC-------CcEEEEEcCCc
Confidence 3788999999988887665 44 445777899999999988 78888877753
Done!