Query 001143
Match_columns 1141
No_of_seqs 913 out of 4027
Neff 6.9
Searched_HMMs 46136
Date Thu Mar 28 16:59:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001143.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/001143hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.4E-59 3E-64 612.1 43.2 293 18-324 285-608 (968)
2 KOG0615 Serine/threonine prote 100.0 1.3E-45 2.8E-50 408.6 17.2 275 801-1135 166-444 (475)
3 KOG0581 Mitogen-activated prot 100.0 2.8E-44 6.1E-49 396.6 20.6 258 803-1134 76-341 (364)
4 KOG0575 Polo-like serine/threo 100.0 2.3E-43 5E-48 408.6 25.0 258 801-1132 14-273 (592)
5 KOG0591 NIMA (never in mitosis 100.0 3.1E-44 6.6E-49 380.3 14.1 266 801-1131 14-284 (375)
6 KOG0595 Serine/threonine-prote 100.0 4E-42 8.7E-47 382.0 25.1 270 801-1134 5-274 (429)
7 KOG0192 Tyrosine kinase specif 100.0 5.7E-42 1.2E-46 394.6 25.2 263 802-1132 37-303 (362)
8 KOG0598 Ribosomal protein S6 k 100.0 4.9E-42 1.1E-46 378.9 19.4 261 802-1134 21-287 (357)
9 KOG0661 MAPK related serine/th 100.0 1.9E-42 4E-47 389.3 15.8 287 805-1137 9-300 (538)
10 KOG0593 Predicted protein kina 100.0 8.2E-42 1.8E-46 365.1 18.9 284 806-1132 2-288 (396)
11 PF14381 EDR1: Ethylene-respon 100.0 4E-42 8.6E-47 361.5 12.6 182 520-762 4-197 (204)
12 KOG0592 3-phosphoinositide-dep 100.0 4.1E-41 8.8E-46 383.6 19.9 269 802-1133 69-343 (604)
13 KOG0582 Ste20-like serine/thre 100.0 2.6E-40 5.5E-45 369.6 25.2 276 802-1134 22-299 (516)
14 KOG0578 p21-activated serine/t 100.0 2.9E-41 6.4E-46 388.4 17.8 261 805-1137 272-532 (550)
15 KOG0659 Cdk activating kinase 100.0 2.3E-40 5E-45 349.5 20.8 289 806-1137 2-290 (318)
16 KOG0600 Cdc2-related protein k 100.0 1E-40 2.3E-45 377.7 18.0 294 798-1134 109-406 (560)
17 KOG0616 cAMP-dependent protein 100.0 4.5E-40 9.8E-45 351.7 17.3 259 802-1136 40-305 (355)
18 KOG0663 Protein kinase PITSLRE 100.0 4.5E-40 9.7E-45 356.0 16.7 293 802-1137 72-370 (419)
19 KOG0597 Serine-threonine prote 100.0 5.2E-40 1.1E-44 373.2 17.6 255 806-1133 2-256 (808)
20 KOG0198 MEKK and related serin 100.0 8.3E-40 1.8E-44 366.8 18.8 263 805-1135 16-283 (313)
21 KOG0583 Serine/threonine prote 100.0 7.9E-39 1.7E-43 371.4 26.1 263 803-1133 14-280 (370)
22 KOG0197 Tyrosine kinases [Sign 100.0 1.9E-39 4.1E-44 373.3 20.5 253 807-1132 207-461 (468)
23 KOG0588 Serine/threonine prote 100.0 1.9E-39 4.2E-44 376.0 19.6 260 803-1135 9-270 (786)
24 KOG0605 NDR and related serine 100.0 4.5E-39 9.9E-44 367.7 20.7 270 804-1135 139-452 (550)
25 KOG0585 Ca2+/calmodulin-depend 100.0 4E-39 8.6E-44 361.7 17.2 278 801-1134 92-378 (576)
26 KOG0658 Glycogen synthase kina 100.0 3.9E-39 8.5E-44 355.1 16.4 283 807-1133 25-311 (364)
27 KOG0033 Ca2+/calmodulin-depend 100.0 3.3E-40 7.1E-45 343.4 5.4 262 806-1135 11-274 (355)
28 cd05612 STKc_PRKX_like Catalyt 100.0 3.5E-38 7.5E-43 355.5 21.9 252 806-1133 1-259 (291)
29 KOG0660 Mitogen-activated prot 100.0 2E-38 4.4E-43 348.9 19.4 289 808-1133 24-315 (359)
30 KOG0193 Serine/threonine prote 100.0 1E-38 2.2E-43 367.7 17.4 267 802-1134 388-655 (678)
31 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1E-37 2.2E-42 351.0 25.0 282 803-1131 2-288 (288)
32 KOG0694 Serine/threonine prote 100.0 1.5E-38 3.2E-43 372.1 18.5 258 802-1133 364-629 (694)
33 PTZ00263 protein kinase A cata 100.0 7.5E-38 1.6E-42 359.5 23.1 256 802-1133 14-276 (329)
34 KOG0201 Serine/threonine prote 100.0 2.7E-39 5.7E-44 361.8 9.7 258 806-1137 13-272 (467)
35 cd07848 STKc_CDKL5 Catalytic d 100.0 2.7E-37 5.8E-42 346.1 25.3 281 806-1131 1-287 (287)
36 cd07859 STKc_TDY_MAPK_plant Ca 100.0 6.4E-37 1.4E-41 351.2 27.0 292 807-1135 1-297 (338)
37 KOG0599 Phosphorylase kinase g 100.0 2.3E-38 5.1E-43 333.6 13.6 267 805-1132 16-287 (411)
38 cd05571 STKc_PKB Catalytic dom 100.0 1.5E-37 3.2E-42 355.9 20.5 249 812-1133 1-256 (323)
39 PTZ00426 cAMP-dependent protei 100.0 1.8E-37 4E-42 358.3 20.7 257 802-1134 26-290 (340)
40 KOG0594 Protein kinase PCTAIRE 100.0 2.7E-37 5.9E-42 341.3 20.6 296 805-1137 10-311 (323)
41 cd07862 STKc_CDK6 Catalytic do 100.0 7.4E-37 1.6E-41 343.1 24.5 284 806-1131 1-290 (290)
42 cd05631 STKc_GRK4 Catalytic do 100.0 3.9E-37 8.5E-42 345.7 21.9 260 807-1134 1-267 (285)
43 PTZ00036 glycogen synthase kin 100.0 1.2E-36 2.5E-41 363.5 26.8 289 804-1133 64-356 (440)
44 KOG0580 Serine/threonine prote 100.0 1.4E-37 3E-42 324.5 16.0 263 801-1134 17-279 (281)
45 KOG0610 Putative serine/threon 100.0 2.9E-37 6.2E-42 343.1 19.4 275 803-1136 74-400 (459)
46 KOG0589 Serine/threonine prote 100.0 1.4E-37 2.9E-42 357.1 17.1 258 805-1132 3-262 (426)
47 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.3E-36 2.8E-41 344.3 25.0 284 803-1134 2-294 (303)
48 cd05628 STKc_NDR1 Catalytic do 100.0 1.3E-36 2.9E-41 353.8 24.6 267 806-1133 1-298 (363)
49 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 7.6E-37 1.7E-41 351.2 22.0 259 806-1133 1-262 (333)
50 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.9E-36 4.1E-41 348.2 25.0 262 805-1132 6-334 (338)
51 cd06649 PKc_MEK2 Catalytic dom 100.0 4E-36 8.7E-41 345.3 27.6 281 805-1134 4-307 (331)
52 cd05599 STKc_NDR_like Catalyti 100.0 9.1E-37 2E-41 354.7 22.0 267 806-1133 1-301 (364)
53 cd05585 STKc_YPK1_like Catalyt 100.0 9.2E-37 2E-41 347.5 21.2 247 814-1133 1-252 (312)
54 cd07872 STKc_PCTAIRE2 Catalyti 100.0 5.4E-36 1.2E-40 340.2 27.3 287 802-1134 2-292 (309)
55 cd05584 STKc_p70S6K Catalytic 100.0 1.3E-36 2.8E-41 348.2 21.3 250 812-1133 2-261 (323)
56 cd05593 STKc_PKB_gamma Catalyt 100.0 1.4E-36 3E-41 348.9 21.3 249 812-1133 1-256 (328)
57 cd05595 STKc_PKB_beta Catalyti 100.0 1.5E-36 3.2E-41 347.9 21.2 249 812-1133 1-256 (323)
58 cd05614 STKc_MSK2_N N-terminal 100.0 1.8E-36 3.9E-41 347.8 21.8 257 807-1133 1-272 (332)
59 cd05629 STKc_NDR_like_fungal C 100.0 1.8E-36 3.8E-41 354.5 22.1 267 806-1133 1-310 (377)
60 KOG0611 Predicted serine/threo 100.0 3.1E-37 6.6E-42 338.5 14.6 253 806-1132 53-307 (668)
61 cd05596 STKc_ROCK Catalytic do 100.0 1.3E-36 2.9E-41 355.1 20.7 266 803-1134 40-310 (370)
62 KOG4721 Serine/threonine prote 100.0 1.2E-37 2.5E-42 353.3 11.1 247 804-1132 122-368 (904)
63 cd05573 STKc_ROCK_NDR_like Cat 100.0 1.3E-36 2.9E-41 350.8 19.8 267 806-1133 1-290 (350)
64 PTZ00283 serine/threonine prot 100.0 8.6E-36 1.9E-40 360.8 27.7 269 805-1132 31-301 (496)
65 KOG0667 Dual-specificity tyros 100.0 1.5E-36 3.3E-41 355.9 20.1 278 807-1133 187-507 (586)
66 cd05589 STKc_PKN Catalytic dom 100.0 3.3E-36 7.1E-41 344.8 22.0 252 808-1133 1-262 (324)
67 cd05590 STKc_nPKC_eta Catalyti 100.0 2.6E-36 5.7E-41 345.3 21.1 249 812-1133 1-258 (320)
68 PHA02988 hypothetical protein; 100.0 1.2E-35 2.6E-40 334.0 25.8 252 812-1132 26-279 (283)
69 cd05587 STKc_cPKC Catalytic do 100.0 4.4E-36 9.6E-41 343.8 22.6 254 807-1133 1-262 (324)
70 cd07875 STKc_JNK1 Catalytic do 100.0 1.3E-35 2.7E-40 345.5 26.5 285 804-1132 22-322 (364)
71 cd07876 STKc_JNK2 Catalytic do 100.0 1.1E-35 2.5E-40 345.2 26.0 284 804-1132 19-319 (359)
72 cd05626 STKc_LATS2 Catalytic d 100.0 4.1E-36 8.9E-41 352.1 22.4 267 807-1133 2-310 (381)
73 cd07874 STKc_JNK3 Catalytic do 100.0 9.5E-36 2.1E-40 345.2 25.2 284 804-1132 15-315 (355)
74 cd05591 STKc_nPKC_epsilon Cata 100.0 3.7E-36 7.9E-41 344.0 21.4 249 812-1133 1-259 (321)
75 PTZ00267 NIMA-related protein 100.0 1.4E-35 3E-40 358.0 27.5 258 806-1132 67-327 (478)
76 KOG0579 Ste20-like serine/thre 100.0 3.5E-37 7.6E-42 351.4 12.7 260 808-1135 34-296 (1187)
77 cd05048 PTKc_Ror Catalytic Dom 100.0 1.5E-35 3.2E-40 331.1 25.5 260 804-1130 3-281 (283)
78 KOG0032 Ca2+/calmodulin-depend 100.0 6.5E-36 1.4E-40 347.1 23.4 262 806-1134 35-299 (382)
79 cd05621 STKc_ROCK2 Catalytic d 100.0 3E-36 6.4E-41 352.2 20.7 265 804-1134 41-310 (370)
80 cd05598 STKc_LATS Catalytic do 100.0 2.4E-36 5.2E-41 353.1 19.9 267 806-1133 1-306 (376)
81 cd05592 STKc_nPKC_theta_delta 100.0 4.7E-36 1E-40 342.7 21.9 249 812-1133 1-253 (316)
82 cd08529 STKc_FA2-like Catalyti 100.0 2.1E-35 4.5E-40 324.0 26.0 253 807-1130 1-255 (256)
83 cd07853 STKc_NLK Catalytic dom 100.0 8.9E-36 1.9E-40 347.9 24.5 286 807-1133 1-293 (372)
84 cd05594 STKc_PKB_alpha Catalyt 100.0 2.2E-36 4.8E-41 346.4 18.9 249 812-1133 1-257 (325)
85 cd05620 STKc_nPKC_delta Cataly 100.0 5.4E-36 1.2E-40 342.2 21.5 249 812-1133 1-253 (316)
86 cd05616 STKc_cPKC_beta Catalyt 100.0 6.6E-36 1.4E-40 342.2 22.1 254 807-1133 1-262 (323)
87 cd06650 PKc_MEK1 Catalytic dom 100.0 2.2E-35 4.7E-40 339.7 26.3 281 805-1134 4-305 (333)
88 KOG1026 Nerve growth factor re 100.0 2.4E-36 5.1E-41 362.4 18.8 267 803-1134 483-764 (774)
89 cd05575 STKc_SGK Catalytic dom 100.0 4.4E-36 9.5E-41 343.6 20.3 249 812-1133 1-256 (323)
90 cd05064 PTKc_EphR_A10 Catalyti 100.0 3.3E-35 7.3E-40 326.3 26.7 254 805-1130 4-263 (266)
91 cd07863 STKc_CDK4 Catalytic do 100.0 1.5E-35 3.3E-40 331.8 23.9 282 807-1131 1-288 (288)
92 cd05625 STKc_LATS1 Catalytic d 100.0 6.5E-36 1.4E-40 350.3 21.9 266 807-1133 2-310 (382)
93 cd05619 STKc_nPKC_theta Cataly 100.0 9.6E-36 2.1E-40 340.2 22.3 249 812-1133 1-253 (316)
94 PHA03212 serine/threonine kina 100.0 3.8E-35 8.2E-40 345.3 28.0 277 804-1134 90-382 (391)
95 cd05096 PTKc_DDR1 Catalytic do 100.0 2.8E-35 6.1E-40 333.3 25.7 266 805-1130 4-303 (304)
96 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.5E-35 5.5E-40 333.2 25.2 284 802-1133 2-291 (301)
97 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.5E-35 3.2E-40 341.8 23.1 285 805-1133 14-303 (343)
98 cd05601 STKc_CRIK Catalytic do 100.0 3.2E-36 6.9E-41 345.5 17.4 263 806-1133 1-268 (330)
99 cd05622 STKc_ROCK1 Catalytic d 100.0 1.2E-35 2.5E-40 347.3 22.1 265 804-1134 41-310 (371)
100 PLN00034 mitogen-activated pro 100.0 1.8E-35 3.9E-40 342.9 23.2 260 802-1135 70-335 (353)
101 cd05627 STKc_NDR2 Catalytic do 100.0 8.9E-36 1.9E-40 346.4 20.5 267 806-1133 1-298 (360)
102 cd05570 STKc_PKC Catalytic dom 100.0 1.5E-35 3.3E-40 338.6 21.7 249 812-1133 1-257 (318)
103 cd05582 STKc_RSK_N N-terminal 100.0 3.9E-36 8.4E-41 343.2 16.6 248 812-1133 2-259 (318)
104 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.2E-35 1.3E-39 321.5 25.4 251 805-1129 3-255 (256)
105 cd05602 STKc_SGK1 Catalytic do 100.0 1E-35 2.3E-40 340.8 19.9 248 812-1132 1-255 (325)
106 cd05605 STKc_GRK4_like Catalyt 100.0 1.8E-35 4E-40 332.2 21.3 259 807-1133 1-266 (285)
107 cd08223 STKc_Nek4 Catalytic do 100.0 1E-34 2.2E-39 319.0 26.4 255 807-1131 1-257 (257)
108 cd05604 STKc_SGK3 Catalytic do 100.0 9.5E-36 2.1E-40 341.2 18.7 249 812-1133 1-256 (325)
109 cd05608 STKc_GRK1 Catalytic do 100.0 2.7E-35 5.9E-40 329.9 21.9 255 814-1134 1-263 (280)
110 cd05615 STKc_cPKC_alpha Cataly 100.0 3.8E-35 8.2E-40 336.2 23.5 254 807-1133 1-262 (323)
111 cd05588 STKc_aPKC Catalytic do 100.0 1.8E-35 3.8E-40 339.8 20.8 249 812-1133 1-267 (329)
112 KOG1187 Serine/threonine prote 100.0 2.2E-35 4.8E-40 341.8 21.4 265 806-1132 75-352 (361)
113 cd08227 PK_STRAD_alpha Pseudok 100.0 7.1E-35 1.5E-39 334.1 25.0 290 810-1134 2-313 (327)
114 cd05088 PTKc_Tie2 Catalytic do 100.0 1E-34 2.3E-39 329.1 26.2 263 802-1132 3-280 (303)
115 cd05603 STKc_SGK2 Catalytic do 100.0 1.6E-35 3.4E-40 338.6 19.5 248 812-1132 1-255 (321)
116 cd05104 PTKc_Kit Catalytic dom 100.0 5.6E-35 1.2E-39 342.0 24.5 260 805-1131 34-373 (375)
117 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.2E-34 2.5E-39 320.7 25.7 264 807-1131 1-267 (267)
118 cd05075 PTKc_Axl Catalytic dom 100.0 1.9E-34 4.2E-39 319.9 27.5 264 808-1131 1-270 (272)
119 cd05072 PTKc_Lyn Catalytic dom 100.0 1.3E-34 2.7E-39 319.7 25.8 254 804-1130 4-259 (261)
120 cd05052 PTKc_Abl Catalytic dom 100.0 1.6E-34 3.5E-39 319.8 26.7 253 805-1130 5-260 (263)
121 PF00069 Pkinase: Protein kina 100.0 2.6E-35 5.7E-40 323.5 20.3 258 808-1131 1-260 (260)
122 KOG0577 Serine/threonine prote 100.0 4.5E-36 9.7E-41 341.6 14.4 256 808-1134 28-284 (948)
123 cd06625 STKc_MEKK3_like Cataly 100.0 1.1E-34 2.3E-39 320.0 24.7 259 806-1131 2-263 (263)
124 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.9E-34 4E-39 322.0 26.9 265 804-1130 4-276 (277)
125 cd05618 STKc_aPKC_iota Catalyt 100.0 3.1E-35 6.6E-40 338.0 21.1 249 812-1133 1-267 (329)
126 KOG0574 STE20-like serine/thre 100.0 4.3E-37 9.3E-42 326.9 5.2 257 808-1136 35-291 (502)
127 PTZ00284 protein kinase; Provi 100.0 1E-34 2.2E-39 349.4 26.4 283 805-1133 128-443 (467)
128 PTZ00266 NIMA-related protein 100.0 1.6E-34 3.4E-39 361.7 28.9 272 802-1133 9-300 (1021)
129 cd05090 PTKc_Ror1 Catalytic do 100.0 1.8E-34 4E-39 322.8 26.5 261 804-1131 3-282 (283)
130 KOG4279 Serine/threonine prote 100.0 8.4E-36 1.8E-40 343.4 15.9 258 812-1134 581-838 (1226)
131 cd05106 PTKc_CSF-1R Catalytic 100.0 6.7E-35 1.5E-39 341.3 23.9 261 804-1131 36-371 (374)
132 cd05116 PTKc_Syk Catalytic dom 100.0 2.4E-34 5.2E-39 317.3 26.5 247 813-1130 2-253 (257)
133 PF07714 Pkinase_Tyr: Protein 100.0 6.5E-35 1.4E-39 323.4 22.1 251 809-1129 2-259 (259)
134 cd05049 PTKc_Trk Catalytic dom 100.0 1.3E-34 2.9E-39 322.6 24.4 259 805-1130 4-279 (280)
135 cd07861 STKc_CDK1_euk Catalyti 100.0 1E-34 2.2E-39 324.3 23.6 280 807-1131 1-285 (285)
136 cd05586 STKc_Sck1_like Catalyt 100.0 1.5E-35 3.3E-40 340.0 17.3 249 814-1133 1-258 (330)
137 KOG4717 Serine/threonine prote 100.0 2.1E-35 4.5E-40 331.7 17.7 255 807-1133 19-275 (864)
138 cd07868 STKc_CDK8 Catalytic do 100.0 1.5E-34 3.2E-39 329.1 24.9 284 811-1131 6-317 (317)
139 cd05062 PTKc_IGF-1R Catalytic 100.0 2.2E-34 4.8E-39 321.1 25.8 258 806-1130 6-276 (277)
140 cd05093 PTKc_TrkB Catalytic do 100.0 3.2E-34 6.9E-39 322.2 27.1 263 805-1133 4-280 (288)
141 cd08217 STKc_Nek2 Catalytic do 100.0 2.6E-34 5.7E-39 315.8 25.8 258 807-1131 1-265 (265)
142 cd06643 STKc_SLK Catalytic dom 100.0 1.4E-34 3.1E-39 323.5 24.0 263 808-1136 7-270 (282)
143 cd05113 PTKc_Btk_Bmx Catalytic 100.0 2.3E-34 5E-39 317.8 25.3 251 805-1129 3-255 (256)
144 cd05035 PTKc_Axl_like Catalyti 100.0 3.3E-34 7.1E-39 317.5 26.5 264 808-1131 1-271 (273)
145 KOG0584 Serine/threonine prote 100.0 1.4E-35 2.9E-40 344.5 16.0 255 809-1134 43-302 (632)
146 cd08220 STKc_Nek8 Catalytic do 100.0 1.8E-34 3.9E-39 316.5 24.1 254 807-1131 1-256 (256)
147 cd05108 PTKc_EGFR Catalytic do 100.0 2.8E-34 6.1E-39 327.3 26.6 257 805-1133 6-269 (316)
148 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-34 2.7E-39 324.1 23.2 252 814-1133 1-259 (277)
149 cd07839 STKc_CDK5 Catalytic do 100.0 1.3E-34 2.8E-39 323.6 23.1 280 807-1131 1-284 (284)
150 cd06654 STKc_PAK1 Catalytic do 100.0 2.6E-34 5.5E-39 324.9 25.7 259 805-1137 19-279 (296)
151 cd08218 STKc_Nek1 Catalytic do 100.0 1.7E-34 3.7E-39 317.4 23.6 254 807-1131 1-256 (256)
152 cd05082 PTKc_Csk Catalytic dom 100.0 3.4E-34 7.3E-39 315.6 26.0 249 805-1130 5-254 (256)
153 cd05094 PTKc_TrkC Catalytic do 100.0 3.7E-34 8.1E-39 322.1 26.8 265 805-1135 4-285 (291)
154 cd08228 STKc_Nek6 Catalytic do 100.0 3.9E-34 8.5E-39 316.5 26.5 260 805-1131 1-264 (267)
155 cd05597 STKc_DMPK_like Catalyt 100.0 9.5E-35 2.1E-39 334.0 22.0 265 806-1133 1-271 (331)
156 cd06637 STKc_TNIK Catalytic do 100.0 1.8E-34 4E-39 320.0 23.4 262 807-1131 7-272 (272)
157 cd08221 STKc_Nek9 Catalytic do 100.0 4E-34 8.7E-39 314.4 25.9 254 807-1131 1-256 (256)
158 cd05033 PTKc_EphR Catalytic do 100.0 5E-34 1.1E-38 316.1 26.8 256 805-1131 3-264 (266)
159 cd06611 STKc_SLK_like Catalyti 100.0 1.3E-34 2.8E-39 323.3 22.2 262 805-1134 4-268 (280)
160 cd05089 PTKc_Tie1 Catalytic do 100.0 5.2E-34 1.1E-38 322.1 27.2 258 805-1132 1-275 (297)
161 cd07841 STKc_CDK7 Catalytic do 100.0 4.2E-34 9.1E-39 322.0 26.2 286 807-1134 1-288 (298)
162 cd08219 STKc_Nek3 Catalytic do 100.0 4E-34 8.7E-39 314.6 25.2 250 807-1128 1-252 (255)
163 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.9E-34 6.3E-39 316.5 24.0 252 806-1130 6-259 (261)
164 KOG1095 Protein tyrosine kinas 100.0 1.5E-34 3.3E-39 358.0 24.1 268 800-1132 686-961 (1025)
165 cd06631 STKc_YSK4 Catalytic do 100.0 3.4E-34 7.4E-39 316.9 24.3 262 807-1131 1-265 (265)
166 cd07847 STKc_CDKL1_4 Catalytic 100.0 4.5E-34 9.8E-39 319.0 25.5 281 806-1131 1-286 (286)
167 cd05630 STKc_GRK6 Catalytic do 100.0 2.2E-34 4.8E-39 323.6 23.0 259 807-1133 1-266 (285)
168 cd05623 STKc_MRCK_alpha Cataly 100.0 7.5E-35 1.6E-39 334.9 19.6 265 806-1133 1-271 (332)
169 cd05632 STKc_GRK5 Catalytic do 100.0 3.1E-34 6.8E-39 322.2 24.0 260 807-1134 1-267 (285)
170 cd05045 PTKc_RET Catalytic dom 100.0 6.3E-34 1.4E-38 319.8 26.5 259 807-1132 1-286 (290)
171 cd06610 STKc_OSR1_SPAK Catalyt 100.0 3.3E-34 7.1E-39 316.1 23.7 265 806-1131 1-267 (267)
172 cd05091 PTKc_Ror2 Catalytic do 100.0 2.4E-34 5.2E-39 321.6 22.9 259 805-1130 4-281 (283)
173 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.1E-34 2.5E-39 332.8 20.7 249 812-1133 1-265 (327)
174 cd05109 PTKc_HER2 Catalytic do 100.0 9.9E-34 2.1E-38 316.2 27.5 258 804-1133 5-269 (279)
175 cd05059 PTKc_Tec_like Catalyti 100.0 4E-34 8.7E-39 315.3 24.0 251 805-1129 3-255 (256)
176 cd05039 PTKc_Csk_like Catalyti 100.0 8.4E-34 1.8E-38 312.2 26.4 249 805-1130 5-254 (256)
177 cd06646 STKc_MAP4K5 Catalytic 100.0 1.9E-34 4E-39 319.4 21.0 259 804-1130 7-267 (267)
178 cd06615 PKc_MEK Catalytic doma 100.0 5.2E-34 1.1E-38 324.1 25.2 280 806-1133 1-292 (308)
179 cd05624 STKc_MRCK_beta Catalyt 100.0 1E-34 2.2E-39 333.8 19.6 265 806-1133 1-271 (331)
180 cd06644 STKc_STK10_LOK Catalyt 100.0 4.3E-34 9.2E-39 321.6 24.2 263 806-1136 12-277 (292)
181 cd07837 STKc_CdkB_plant Cataly 100.0 5E-34 1.1E-38 320.7 24.5 290 806-1132 1-295 (295)
182 cd07832 STKc_CCRK Catalytic do 100.0 8.3E-34 1.8E-38 316.8 26.1 280 807-1131 1-285 (286)
183 cd05111 PTK_HER3 Pseudokinase 100.0 8.7E-34 1.9E-38 317.4 26.2 256 805-1132 6-268 (279)
184 cd05053 PTKc_FGFR Catalytic do 100.0 6.6E-34 1.4E-38 319.7 25.2 261 805-1132 11-291 (293)
185 cd06638 STKc_myosinIIIA Cataly 100.0 6.1E-34 1.3E-38 318.5 24.8 268 803-1131 15-286 (286)
186 cd05032 PTKc_InsR_like Catalyt 100.0 8.4E-34 1.8E-38 315.6 25.6 259 805-1130 5-276 (277)
187 cd05068 PTKc_Frk_like Catalyti 100.0 8.6E-34 1.9E-38 313.3 25.4 253 805-1130 5-259 (261)
188 cd06613 STKc_MAP4K3_like Catal 100.0 8.8E-34 1.9E-38 312.2 25.4 259 805-1130 2-262 (262)
189 cd05084 PTKc_Fes Catalytic dom 100.0 1E-33 2.2E-38 310.8 25.8 248 812-1130 1-251 (252)
190 cd06655 STKc_PAK2 Catalytic do 100.0 8.4E-34 1.8E-38 320.8 25.8 258 805-1136 18-277 (296)
191 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 1.2E-33 2.5E-38 312.1 26.3 252 805-1130 5-258 (260)
192 cd06612 STKc_MST1_2 Catalytic 100.0 4.6E-34 1E-38 313.3 22.9 253 805-1131 2-256 (256)
193 cd06609 STKc_MST3_like Catalyt 100.0 6.2E-34 1.3E-38 316.8 24.1 256 806-1135 1-258 (274)
194 cd05054 PTKc_VEGFR Catalytic d 100.0 5.1E-34 1.1E-38 329.1 23.9 262 805-1132 6-333 (337)
195 KOG0194 Protein tyrosine kinas 100.0 1.6E-34 3.5E-39 337.5 19.8 257 807-1134 158-422 (474)
196 cd06651 STKc_MEKK3 Catalytic d 100.0 9.3E-34 2E-38 314.2 25.0 261 806-1132 2-265 (266)
197 cd06645 STKc_MAP4K3 Catalytic 100.0 2.4E-34 5.1E-39 318.6 20.3 258 805-1130 8-267 (267)
198 cd06656 STKc_PAK3 Catalytic do 100.0 4.6E-34 9.9E-39 323.0 22.9 258 805-1136 18-277 (297)
199 cd05042 PTKc_Aatyk Catalytic d 100.0 1.1E-33 2.5E-38 313.8 25.6 259 812-1129 1-267 (269)
200 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.1E-34 1.1E-38 318.8 23.0 264 805-1131 15-282 (282)
201 cd06608 STKc_myosinIII_like Ca 100.0 6.8E-34 1.5E-38 314.6 23.7 269 803-1131 3-275 (275)
202 cd05574 STKc_phototropin_like 100.0 1.2E-33 2.6E-38 321.5 26.4 270 806-1134 1-295 (316)
203 PHA03207 serine/threonine kina 100.0 4.1E-34 8.9E-39 336.6 23.1 278 806-1135 92-382 (392)
204 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.1E-33 2.5E-38 320.9 25.8 263 805-1134 17-301 (307)
205 cd05061 PTKc_InsR Catalytic do 100.0 2.5E-33 5.5E-38 314.9 28.3 265 805-1136 5-282 (288)
206 cd06617 PKc_MKK3_6 Catalytic d 100.0 7.8E-34 1.7E-38 316.8 24.0 264 806-1136 1-269 (283)
207 cd05060 PTKc_Syk_like Catalyti 100.0 1.6E-33 3.5E-38 310.5 26.1 249 812-1132 1-255 (257)
208 cd05083 PTKc_Chk Catalytic dom 100.0 1E-33 2.2E-38 311.4 24.4 248 804-1130 4-252 (254)
209 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.2E-33 2.7E-38 333.3 26.7 261 805-1132 36-397 (400)
210 cd08225 STKc_Nek5 Catalytic do 100.0 7.6E-34 1.7E-38 311.7 23.2 255 807-1131 1-257 (257)
211 cd08229 STKc_Nek7 Catalytic do 100.0 1.2E-33 2.5E-38 312.8 24.7 260 805-1131 1-264 (267)
212 cd05071 PTKc_Src Catalytic dom 100.0 2.6E-33 5.6E-38 310.4 27.5 252 805-1130 5-258 (262)
213 cd06619 PKc_MKK5 Catalytic dom 100.0 5.1E-34 1.1E-38 319.0 22.0 250 806-1134 1-259 (279)
214 PHA03209 serine/threonine kina 100.0 3.9E-34 8.4E-39 332.6 21.8 270 806-1133 66-356 (357)
215 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.6E-33 5.7E-38 309.3 27.4 260 806-1132 2-265 (267)
216 PHA03211 serine/threonine kina 100.0 9.5E-34 2.1E-38 338.9 25.6 274 805-1133 168-460 (461)
217 cd05580 STKc_PKA Catalytic dom 100.0 1.4E-33 2.9E-38 317.4 25.2 254 806-1135 1-261 (290)
218 cd07845 STKc_CDK10 Catalytic d 100.0 1.7E-33 3.6E-38 319.6 26.2 288 804-1134 5-296 (309)
219 cd07850 STKc_JNK Catalytic dom 100.0 2.2E-33 4.7E-38 325.4 27.5 285 805-1133 15-316 (353)
220 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2E-33 4.2E-38 312.2 25.8 260 812-1130 1-268 (269)
221 cd05051 PTKc_DDR Catalytic dom 100.0 1.4E-33 3.1E-38 317.1 25.0 266 805-1130 4-295 (296)
222 cd06642 STKc_STK25-YSK1 Cataly 100.0 6.5E-34 1.4E-38 317.4 22.0 252 807-1133 5-258 (277)
223 cd06630 STKc_MEKK1 Catalytic d 100.0 7.3E-34 1.6E-38 314.2 22.2 266 807-1132 1-268 (268)
224 cd07860 STKc_CDK2_3 Catalytic 100.0 8.1E-34 1.8E-38 317.2 22.7 279 807-1131 1-284 (284)
225 cd05066 PTKc_EphR_A Catalytic 100.0 2.8E-33 6E-38 310.6 26.6 259 805-1131 3-265 (267)
226 cd00192 PTKc Catalytic domain 100.0 2.4E-33 5.1E-38 307.3 25.8 251 812-1129 1-261 (262)
227 cd07867 STKc_CDC2L6 Catalytic 100.0 1.3E-33 2.9E-38 320.8 24.5 284 811-1131 6-317 (317)
228 cd06640 STKc_MST4 Catalytic do 100.0 1.9E-33 4.2E-38 313.8 25.3 253 807-1134 5-259 (277)
229 cd07846 STKc_CDKL2_3 Catalytic 100.0 9E-34 2E-38 316.8 22.6 281 806-1131 1-286 (286)
230 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.2E-33 2.6E-38 316.4 23.7 260 806-1134 1-268 (286)
231 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.9E-33 4.1E-38 310.4 24.7 252 805-1130 5-258 (260)
232 cd05092 PTKc_TrkA Catalytic do 100.0 2.6E-33 5.6E-38 313.6 26.1 258 805-1130 4-279 (280)
233 cd05115 PTKc_Zap-70 Catalytic 100.0 3.2E-33 6.9E-38 309.1 26.5 248 813-1131 2-254 (257)
234 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.9E-33 4.1E-38 318.4 25.1 262 805-1133 14-297 (304)
235 cd05069 PTKc_Yes Catalytic dom 100.0 3.4E-33 7.3E-38 308.7 26.5 251 806-1130 6-258 (260)
236 KOG1989 ARK protein kinase fam 100.0 3.2E-34 6.9E-39 345.8 19.8 267 807-1134 38-313 (738)
237 cd05099 PTKc_FGFR4 Catalytic d 100.0 2.4E-33 5.3E-38 319.4 26.0 263 804-1133 10-294 (314)
238 cd06652 STKc_MEKK2 Catalytic d 100.0 2.8E-33 6.1E-38 309.9 25.8 259 806-1131 2-264 (265)
239 cd05050 PTKc_Musk Catalytic do 100.0 3E-33 6.5E-38 313.8 26.3 260 804-1130 3-287 (288)
240 cd06639 STKc_myosinIIIB Cataly 100.0 2.6E-33 5.7E-38 314.7 25.7 267 805-1132 21-291 (291)
241 cd05065 PTKc_EphR_B Catalytic 100.0 3.3E-33 7.2E-38 310.1 26.1 259 805-1131 3-267 (269)
242 cd07843 STKc_CDC2L1 Catalytic 100.0 1E-33 2.2E-38 318.5 22.1 285 804-1131 3-293 (293)
243 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.8E-33 3.9E-38 312.4 23.8 266 807-1131 2-272 (272)
244 cd06658 STKc_PAK5 Catalytic do 100.0 1.1E-33 2.4E-38 319.3 22.3 258 807-1138 23-282 (292)
245 cd05056 PTKc_FAK Catalytic dom 100.0 4.5E-33 9.7E-38 309.2 26.6 254 806-1132 6-265 (270)
246 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 1.1E-33 2.4E-38 316.9 22.0 255 805-1134 4-272 (284)
247 KOG4645 MAPKKK (MAP kinase kin 100.0 2E-35 4.3E-40 362.3 8.4 267 807-1137 1236-1503(1509)
248 KOG0596 Dual specificity; seri 100.0 2.4E-34 5.2E-39 327.9 16.6 263 806-1133 361-632 (677)
249 cd07844 STKc_PCTAIRE_like Cata 100.0 3E-33 6.4E-38 314.1 25.4 282 803-1131 2-291 (291)
250 cd07865 STKc_CDK9 Catalytic do 100.0 3.3E-33 7.1E-38 315.7 25.8 296 803-1131 9-310 (310)
251 cd05034 PTKc_Src_like Catalyti 100.0 4E-33 8.6E-38 307.5 25.8 254 804-1130 4-259 (261)
252 cd05112 PTKc_Itk Catalytic dom 100.0 3.6E-33 7.8E-38 306.9 25.4 251 805-1129 3-255 (256)
253 cd05047 PTKc_Tie Catalytic dom 100.0 5E-33 1.1E-37 309.3 26.2 252 812-1131 1-267 (270)
254 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 5E-33 1.1E-37 311.2 26.4 271 807-1132 4-281 (283)
255 cd05085 PTKc_Fer Catalytic dom 100.0 7.6E-33 1.7E-37 303.2 26.9 247 812-1130 1-249 (250)
256 cd07866 STKc_BUR1 Catalytic do 100.0 3.1E-33 6.7E-38 316.0 24.6 301 803-1131 5-311 (311)
257 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 8.2E-33 1.8E-37 310.6 27.8 266 806-1135 1-273 (287)
258 cd05043 PTK_Ryk Pseudokinase d 100.0 5.9E-33 1.3E-37 309.9 26.5 262 805-1132 5-276 (280)
259 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 4.2E-33 9.1E-38 311.5 25.2 247 813-1129 2-273 (274)
260 cd05609 STKc_MAST Catalytic do 100.0 4.3E-33 9.4E-38 315.8 25.4 268 806-1133 1-278 (305)
261 cd05073 PTKc_Hck Catalytic dom 100.0 7.7E-33 1.7E-37 305.8 26.8 252 805-1130 5-258 (260)
262 KOG0986 G protein-coupled rece 100.0 6.8E-35 1.5E-39 325.5 10.2 344 707-1134 99-452 (591)
263 PHA03210 serine/threonine kina 100.0 9.3E-34 2E-38 343.7 20.9 294 805-1133 147-459 (501)
264 PLN00009 cyclin-dependent kina 100.0 7E-33 1.5E-37 311.8 26.5 286 805-1134 1-290 (294)
265 cd05063 PTKc_EphR_A2 Catalytic 100.0 9.8E-33 2.1E-37 305.8 27.3 257 805-1131 4-266 (268)
266 cd05100 PTKc_FGFR3 Catalytic d 100.0 5.5E-33 1.2E-37 319.4 26.1 261 806-1133 12-294 (334)
267 cd07842 STKc_CDK8_like Catalyt 100.0 4.5E-33 9.7E-38 315.8 25.0 293 807-1131 1-316 (316)
268 cd06632 STKc_MEKK1_plant Catal 100.0 5.1E-33 1.1E-37 305.0 24.6 254 807-1131 1-258 (258)
269 cd06605 PKc_MAPKK Catalytic do 100.0 2E-33 4.4E-38 310.2 21.5 254 806-1133 1-262 (265)
270 cd05055 PTKc_PDGFR Catalytic d 100.0 7E-33 1.5E-37 314.2 26.5 259 803-1131 32-300 (302)
271 cd07849 STKc_ERK1_2_like Catal 100.0 5.3E-33 1.1E-37 319.8 25.6 289 806-1134 5-298 (336)
272 cd06917 STKc_NAK1_like Catalyt 100.0 3.5E-33 7.5E-38 310.9 23.3 256 807-1135 2-262 (277)
273 cd07833 STKc_CDKL Catalytic do 100.0 4E-33 8.7E-38 311.6 23.8 282 806-1131 1-288 (288)
274 cd05107 PTKc_PDGFR_beta Cataly 100.0 4.8E-33 1E-37 328.2 25.7 261 804-1131 35-398 (401)
275 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.1E-33 1.5E-37 307.4 25.6 246 812-1129 1-261 (262)
276 KOG4278 Protein tyrosine kinas 100.0 1.2E-33 2.5E-38 322.3 19.4 255 807-1132 268-523 (1157)
277 cd06623 PKc_MAPKK_plant_like C 100.0 7.5E-33 1.6E-37 304.8 25.3 254 806-1133 1-261 (264)
278 cd06626 STKc_MEKK4 Catalytic d 100.0 5.9E-33 1.3E-37 305.9 24.5 261 807-1131 1-264 (264)
279 cd05058 PTKc_Met_Ron Catalytic 100.0 1.4E-32 3.1E-37 303.2 27.5 253 812-1132 1-259 (262)
280 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.1E-33 1.1E-37 321.3 25.0 263 805-1133 6-340 (343)
281 cd08215 STKc_Nek Catalytic dom 100.0 6.6E-33 1.4E-37 303.1 24.5 256 807-1131 1-258 (258)
282 cd07831 STKc_MOK Catalytic dom 100.0 8.8E-33 1.9E-37 307.9 25.9 278 808-1131 1-282 (282)
283 cd07836 STKc_Pho85 Catalytic d 100.0 7E-33 1.5E-37 309.3 24.7 281 807-1131 1-284 (284)
284 cd06641 STKc_MST3 Catalytic do 100.0 6.9E-33 1.5E-37 309.4 24.6 251 808-1133 6-258 (277)
285 cd05097 PTKc_DDR_like Catalyti 100.0 7.9E-33 1.7E-37 312.0 25.2 266 805-1130 4-294 (295)
286 cd05040 PTKc_Ack_like Catalyti 100.0 1.2E-32 2.7E-37 302.8 26.2 250 812-1130 1-256 (257)
287 PRK13184 pknD serine/threonine 100.0 8.8E-33 1.9E-37 345.0 28.0 270 805-1129 1-287 (932)
288 cd05057 PTKc_EGFR_like Catalyt 100.0 1.3E-32 2.9E-37 307.1 26.7 258 803-1132 4-268 (279)
289 cd05086 PTKc_Aatyk2 Catalytic 100.0 1E-32 2.2E-37 306.8 25.5 261 812-1130 1-267 (268)
290 cd06647 STKc_PAK_I Catalytic d 100.0 4.1E-33 8.9E-38 314.6 22.6 259 805-1137 18-278 (293)
291 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.4E-32 3E-37 307.5 26.2 272 806-1131 4-282 (284)
292 cd08530 STKc_CNK2-like Catalyt 100.0 9.5E-33 2.1E-37 302.6 24.4 253 807-1130 1-255 (256)
293 cd06624 STKc_ASK Catalytic dom 100.0 9.2E-33 2E-37 306.3 24.5 252 809-1131 11-268 (268)
294 cd06659 STKc_PAK6 Catalytic do 100.0 4.9E-33 1.1E-37 314.8 22.6 253 808-1134 23-277 (297)
295 cd08222 STKc_Nek11 Catalytic d 100.0 6E-33 1.3E-37 306.1 22.4 257 807-1131 1-260 (260)
296 KOG0666 Cyclin C-dependent kin 100.0 3.1E-34 6.8E-39 307.5 11.6 298 803-1134 21-343 (438)
297 cd07855 STKc_ERK5 Catalytic do 100.0 6E-33 1.3E-37 319.1 23.2 290 806-1134 5-300 (334)
298 cd06607 STKc_TAO Catalytic dom 100.0 1.1E-32 2.5E-37 312.7 25.2 257 806-1134 15-273 (307)
299 cd06616 PKc_MKK4 Catalytic dom 100.0 4.2E-33 9.1E-38 312.3 21.1 265 805-1133 3-272 (288)
300 cd05044 PTKc_c-ros Catalytic d 100.0 1.3E-32 2.9E-37 304.7 24.7 257 812-1130 1-268 (269)
301 cd05095 PTKc_DDR2 Catalytic do 100.0 1.9E-32 4.2E-37 308.9 26.4 265 806-1130 5-295 (296)
302 cd05572 STKc_cGK_PKG Catalytic 100.0 1.2E-32 2.7E-37 304.0 24.1 247 814-1133 1-257 (262)
303 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-32 2.6E-37 309.3 24.3 254 807-1134 20-275 (285)
304 KOG2345 Serine/threonine prote 100.0 1.2E-33 2.5E-38 296.2 14.9 276 805-1131 20-299 (302)
305 cd07835 STKc_CDK1_like Catalyt 100.0 9E-33 2E-37 308.6 23.1 278 808-1131 1-283 (283)
306 cd05041 PTKc_Fes_like Catalyti 100.0 2.1E-32 4.5E-37 300.0 25.4 248 812-1130 1-250 (251)
307 cd05046 PTK_CCK4 Pseudokinase 100.0 8.5E-33 1.8E-37 307.5 22.6 258 806-1130 5-274 (275)
308 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.3E-32 2.8E-37 309.1 24.1 282 804-1131 3-291 (291)
309 KOG0196 Tyrosine kinase, EPH ( 100.0 6.5E-34 1.4E-38 334.0 13.3 263 804-1134 627-893 (996)
310 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.6E-32 3.4E-37 316.2 24.6 287 806-1133 5-296 (337)
311 cd05110 PTKc_HER4 Catalytic do 100.0 2.4E-32 5.3E-37 309.6 25.8 258 804-1133 5-269 (303)
312 cd05633 STKc_GRK3 Catalytic do 100.0 1.3E-32 2.8E-37 308.3 23.2 249 813-1134 1-261 (279)
313 cd06627 STKc_Cdc7_like Catalyt 100.0 2.5E-32 5.5E-37 298.5 24.9 252 807-1131 1-254 (254)
314 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2E-32 4.4E-37 306.7 24.7 270 808-1131 6-282 (284)
315 cd05578 STKc_Yank1 Catalytic d 100.0 5.4E-33 1.2E-37 306.1 19.7 251 807-1131 1-258 (258)
316 smart00219 TyrKc Tyrosine kina 100.0 2.7E-32 5.8E-37 299.0 25.0 250 808-1128 1-257 (258)
317 KOG0199 ACK and related non-re 100.0 2.5E-33 5.5E-38 324.5 17.2 262 803-1134 107-374 (1039)
318 cd07879 STKc_p38delta_MAPK13 C 100.0 2.1E-32 4.6E-37 315.9 24.9 284 806-1134 15-303 (342)
319 KOG4257 Focal adhesion tyrosin 100.0 2.5E-33 5.4E-38 321.0 16.7 251 809-1130 392-647 (974)
320 cd07852 STKc_MAPK15 Catalytic 100.0 1.7E-32 3.6E-37 315.6 23.8 291 804-1134 5-301 (337)
321 cd06653 STKc_MEKK3_like_1 Cata 100.0 3.4E-32 7.3E-37 301.4 25.3 258 806-1130 2-263 (264)
322 cd05611 STKc_Rim15_like Cataly 100.0 1.8E-32 3.9E-37 302.3 22.8 250 812-1134 2-257 (260)
323 cd05074 PTKc_Tyro3 Catalytic d 100.0 5E-32 1.1E-36 300.7 26.5 264 808-1131 1-271 (273)
324 cd06614 STKc_PAK Catalytic dom 100.0 2.2E-32 4.8E-37 306.5 23.8 258 804-1134 17-276 (286)
325 cd07880 STKc_p38gamma_MAPK12 C 100.0 4.7E-32 1E-36 313.3 27.1 285 806-1134 15-304 (343)
326 cd07840 STKc_CDK9_like Catalyt 100.0 1.7E-32 3.6E-37 305.8 22.6 282 808-1131 1-287 (287)
327 KOG0612 Rho-associated, coiled 100.0 4.8E-34 1E-38 346.4 10.8 266 805-1136 74-346 (1317)
328 cd08528 STKc_Nek10 Catalytic d 100.0 2.7E-32 5.8E-37 302.5 23.9 261 807-1130 1-268 (269)
329 PTZ00024 cyclin-dependent prot 100.0 1.8E-32 3.9E-37 314.9 23.0 299 805-1134 7-319 (335)
330 cd08216 PK_STRAD Pseudokinase 100.0 3.3E-32 7.1E-37 309.2 24.7 292 808-1134 4-301 (314)
331 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 1.5E-32 3.2E-37 303.5 21.2 246 812-1129 1-257 (258)
332 cd05122 PKc_STE Catalytic doma 100.0 4E-32 8.7E-37 295.1 24.2 251 807-1130 1-253 (253)
333 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.6E-32 7.9E-37 313.9 25.1 296 806-1132 5-304 (342)
334 cd07877 STKc_p38alpha_MAPK14 C 100.0 5E-32 1.1E-36 313.3 25.9 284 806-1133 17-305 (345)
335 cd05579 STKc_MAST_like Catalyt 100.0 2.6E-32 5.7E-37 299.9 22.4 257 814-1133 1-262 (265)
336 cd05118 STKc_CMGC Catalytic do 100.0 3.2E-32 7E-37 303.2 23.4 278 808-1131 1-283 (283)
337 cd07857 STKc_MPK1 Catalytic do 100.0 6.6E-32 1.4E-36 310.2 26.6 288 807-1132 1-296 (332)
338 cd06635 STKc_TAO1 Catalytic do 100.0 6.4E-32 1.4E-36 308.3 26.2 258 807-1136 26-285 (317)
339 cd07838 STKc_CDK4_6_like Catal 100.0 6.3E-32 1.4E-36 301.5 25.7 282 808-1131 1-287 (287)
340 cd05577 STKc_GRK Catalytic dom 100.0 2E-32 4.3E-37 305.7 21.6 253 814-1134 1-260 (277)
341 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 4.2E-32 9.2E-37 298.3 23.8 245 812-1129 1-258 (259)
342 cd05581 STKc_PDK1 Catalytic do 100.0 2.3E-32 4.9E-37 303.6 21.8 263 806-1131 1-280 (280)
343 cd08226 PK_STRAD_beta Pseudoki 100.0 6E-32 1.3E-36 310.0 25.9 287 812-1133 4-313 (328)
344 cd07864 STKc_CDK12 Catalytic d 100.0 3E-32 6.4E-37 307.3 22.9 294 804-1131 5-302 (302)
345 cd06606 STKc_MAPKKK Catalytic 100.0 5.7E-32 1.2E-36 295.2 24.3 256 807-1131 1-260 (260)
346 cd05606 STKc_beta_ARK Catalyti 100.0 3.4E-32 7.3E-37 304.6 22.9 251 813-1134 1-261 (278)
347 cd06657 STKc_PAK4 Catalytic do 100.0 3.9E-32 8.5E-37 306.8 23.6 257 808-1138 22-280 (292)
348 KOG0607 MAP kinase-interacting 100.0 6E-33 1.3E-37 298.3 15.9 271 805-1133 75-366 (463)
349 cd07834 STKc_MAPK Catalytic do 100.0 2.9E-32 6.3E-37 312.1 22.4 289 807-1133 1-294 (330)
350 cd07830 STKc_MAK_like Catalyti 100.0 4.5E-32 9.9E-37 302.6 23.3 277 808-1131 1-283 (283)
351 KOG0586 Serine/threonine prote 100.0 8.6E-33 1.9E-37 321.2 17.5 258 801-1132 51-310 (596)
352 KOG0983 Mitogen-activated prot 100.0 4.4E-33 9.5E-38 294.3 13.2 264 802-1133 88-354 (391)
353 KOG0690 Serine/threonine prote 100.0 2E-33 4.4E-38 301.9 10.8 261 801-1134 163-430 (516)
354 cd07851 STKc_p38 Catalytic dom 100.0 4.8E-32 1E-36 313.1 23.1 286 805-1134 14-304 (343)
355 cd05613 STKc_MSK1_N N-terminal 100.0 5.6E-32 1.2E-36 303.8 22.7 260 807-1135 1-275 (290)
356 cd06618 PKc_MKK7 Catalytic dom 100.0 6.9E-32 1.5E-36 304.4 23.5 264 802-1134 11-279 (296)
357 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 7.3E-32 1.6E-36 300.5 23.4 272 806-1131 4-282 (284)
358 PHA02882 putative serine/threo 100.0 1.6E-31 3.4E-36 302.0 25.3 273 806-1129 12-293 (294)
359 cd07829 STKc_CDK_like Catalyti 100.0 1E-31 2.2E-36 299.1 23.4 279 808-1131 1-282 (282)
360 cd06633 STKc_TAO3 Catalytic do 100.0 1.6E-31 3.5E-36 304.6 25.3 255 808-1134 23-279 (313)
361 KOG0662 Cyclin-dependent kinas 100.0 1.8E-32 3.8E-37 274.0 14.1 284 806-1136 2-291 (292)
362 PHA03390 pk1 serine/threonine- 100.0 8.4E-32 1.8E-36 299.8 20.7 245 806-1132 14-266 (267)
363 cd06634 STKc_TAO2 Catalytic do 100.0 2.2E-31 4.7E-36 302.7 24.3 256 807-1134 16-273 (308)
364 KOG0669 Cyclin T-dependent kin 100.0 1.7E-33 3.7E-38 294.2 6.1 298 805-1135 16-322 (376)
365 cd05583 STKc_MSK_N N-terminal 100.0 1.7E-31 3.6E-36 299.6 22.5 259 807-1134 1-272 (288)
366 cd05610 STKc_MASTL Catalytic d 100.0 3E-31 6.4E-36 331.9 26.8 149 804-983 2-152 (669)
367 KOG0604 MAP kinase-activated p 100.0 1.9E-32 4.2E-37 292.9 13.6 261 805-1134 60-328 (400)
368 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 4.1E-31 8.9E-36 303.6 24.8 280 805-1133 9-293 (328)
369 KOG0587 Traf2- and Nck-interac 100.0 9.7E-32 2.1E-36 320.5 20.0 265 805-1132 18-286 (953)
370 KOG2052 Activin A type IB rece 100.0 1.4E-31 3.1E-36 299.5 20.1 266 807-1134 212-505 (513)
371 cd05123 STKc_AGC Catalytic dom 100.0 3.8E-31 8.1E-36 289.2 22.8 245 814-1131 1-250 (250)
372 KOG1094 Discoidin domain recep 100.0 6.1E-32 1.3E-36 308.7 16.9 265 805-1132 537-804 (807)
373 KOG1035 eIF-2alpha kinase GCN2 100.0 5.3E-32 1.2E-36 331.2 17.5 282 805-1132 478-875 (1351)
374 KOG0696 Serine/threonine prote 100.0 4.9E-32 1.1E-36 298.2 14.0 261 800-1133 343-611 (683)
375 KOG0614 cGMP-dependent protein 100.0 1.3E-32 2.9E-37 309.7 9.4 264 799-1134 413-683 (732)
376 KOG4236 Serine/threonine prote 100.0 5.6E-32 1.2E-36 304.7 10.7 254 811-1133 569-824 (888)
377 KOG3653 Transforming growth fa 100.0 1.8E-30 3.9E-35 292.7 21.5 268 805-1136 209-507 (534)
378 KOG4250 TANK binding protein k 100.0 3.3E-31 7.2E-36 311.3 14.5 212 806-1051 13-226 (732)
379 KOG0671 LAMMER dual specificit 100.0 4E-31 8.6E-36 292.0 13.0 286 805-1134 88-412 (415)
380 KOG0603 Ribosomal protein S6 k 100.0 8.2E-31 1.8E-35 306.2 16.2 243 804-1132 320-567 (612)
381 KOG1006 Mitogen-activated prot 100.0 5.4E-32 1.2E-36 285.4 5.3 265 806-1132 64-331 (361)
382 KOG1151 Tousled-like protein k 100.0 6.3E-31 1.4E-35 291.3 9.2 278 806-1132 463-745 (775)
383 KOG0200 Fibroblast/platelet-de 100.0 3E-29 6.6E-34 309.8 24.5 259 807-1131 297-578 (609)
384 PLN03225 Serine/threonine-prot 100.0 2.4E-29 5.2E-34 308.0 22.8 291 803-1136 129-458 (566)
385 KOG1025 Epidermal growth facto 100.0 6.5E-30 1.4E-34 300.8 16.8 252 808-1131 698-956 (1177)
386 cd05576 STKc_RPK118_like Catal 100.0 8.8E-30 1.9E-34 278.4 16.3 227 817-1131 4-237 (237)
387 KOG0668 Casein kinase II, alph 100.0 4.2E-30 9E-35 265.9 11.3 283 800-1133 32-327 (338)
388 KOG1290 Serine/threonine prote 100.0 7.2E-29 1.6E-33 280.0 20.8 285 806-1133 78-555 (590)
389 KOG0608 Warts/lats-like serine 100.0 3.5E-29 7.6E-34 287.2 15.2 265 808-1133 631-933 (1034)
390 KOG0695 Serine/threonine prote 100.0 2.7E-29 5.9E-34 270.5 13.2 259 803-1133 247-521 (593)
391 KOG1027 Serine/threonine prote 100.0 7.9E-30 1.7E-34 303.1 9.8 261 808-1135 511-774 (903)
392 smart00220 S_TKc Serine/Threon 100.0 4.6E-28 9.9E-33 261.0 22.0 241 818-1131 1-244 (244)
393 PLN03224 probable serine/threo 100.0 9.8E-28 2.1E-32 287.7 22.6 293 804-1133 143-505 (507)
394 KOG0670 U4/U6-associated splic 100.0 5.1E-29 1.1E-33 281.6 9.2 280 806-1133 432-751 (752)
395 KOG0664 Nemo-like MAPK-related 100.0 1.2E-29 2.7E-34 267.4 3.8 290 805-1132 52-347 (449)
396 KOG0984 Mitogen-activated prot 100.0 3.2E-28 6.8E-33 249.1 13.7 227 805-1070 45-274 (282)
397 KOG0665 Jun-N-terminal kinase 100.0 1.3E-28 2.8E-33 266.7 10.9 283 805-1132 16-314 (369)
398 KOG0576 Mitogen-activated prot 99.9 7E-29 1.5E-33 288.1 5.5 263 804-1134 13-277 (829)
399 PLN00113 leucine-rich repeat r 99.9 1.1E-26 2.4E-31 303.6 19.1 274 17-300 118-397 (968)
400 KOG1024 Receptor-like protein 99.9 1.8E-26 4E-31 253.9 16.9 258 807-1130 285-553 (563)
401 KOG0444 Cytoskeletal regulator 99.9 1.7E-28 3.6E-33 280.6 -1.8 267 18-293 56-372 (1255)
402 KOG1152 Signal transduction se 99.9 4.7E-27 1E-31 268.9 9.7 208 802-1051 557-771 (772)
403 KOG1167 Serine/threonine prote 99.9 2.4E-26 5.2E-31 257.6 11.5 288 805-1133 35-386 (418)
404 cd00180 PKc Catalytic domain o 99.9 1.9E-24 4.1E-29 226.3 21.6 212 814-1129 1-215 (215)
405 KOG4194 Membrane glycoprotein 99.9 9.1E-27 2E-31 266.4 1.8 275 17-300 149-433 (873)
406 KOG4194 Membrane glycoprotein 99.9 9.9E-27 2.1E-31 266.1 2.0 275 18-298 126-407 (873)
407 smart00221 STYKc Protein kinas 99.9 6.6E-24 1.4E-28 227.1 22.0 216 808-1068 1-221 (225)
408 KOG1345 Serine/threonine kinas 99.9 1.8E-25 3.8E-30 236.8 9.1 258 806-1132 24-291 (378)
409 PLN00181 protein SPA1-RELATED; 99.9 6.6E-25 1.4E-29 280.6 11.7 225 864-1133 27-270 (793)
410 KOG0444 Cytoskeletal regulator 99.9 1.3E-25 2.8E-30 257.1 -2.8 160 106-270 214-375 (1255)
411 smart00750 KIND kinase non-cat 99.9 5E-23 1.1E-27 214.2 15.1 168 908-1134 1-171 (176)
412 KOG0472 Leucine-rich repeat pr 99.9 5E-26 1.1E-30 251.5 -11.3 242 19-271 47-289 (565)
413 KOG4237 Extracellular matrix p 99.9 3.9E-24 8.4E-29 236.8 -3.0 272 12-286 62-375 (498)
414 KOG0472 Leucine-rich repeat pr 99.9 6.8E-25 1.5E-29 242.5 -8.9 249 41-301 45-293 (565)
415 KOG1164 Casein kinase (serine/ 99.9 1.6E-20 3.4E-25 215.8 23.8 269 807-1131 19-296 (322)
416 PRK15387 E3 ubiquitin-protein 99.9 4E-21 8.7E-26 238.3 17.4 200 69-300 263-462 (788)
417 COG0515 SPS1 Serine/threonine 99.9 1.2E-19 2.5E-24 200.7 26.5 272 808-1132 2-279 (384)
418 KOG0590 Checkpoint kinase and 99.9 4.8E-22 1.1E-26 243.5 7.9 270 805-1133 316-590 (601)
419 KOG1165 Casein kinase (serine/ 99.8 4.1E-20 8.9E-25 201.2 20.0 218 806-1061 28-251 (449)
420 PRK15370 E3 ubiquitin-protein 99.8 4.1E-21 8.9E-26 239.5 14.0 245 19-296 180-428 (754)
421 PRK15387 E3 ubiquitin-protein 99.8 8.4E-21 1.8E-25 235.5 15.9 230 17-279 222-465 (788)
422 PRK15370 E3 ubiquitin-protein 99.8 3.5E-21 7.6E-26 240.2 12.1 229 16-271 198-429 (754)
423 KOG0195 Integrin-linked kinase 99.8 2.9E-21 6.2E-26 204.4 9.5 259 799-1132 183-446 (448)
424 KOG1163 Casein kinase (serine/ 99.8 3E-19 6.5E-24 187.1 19.2 212 803-1054 12-226 (341)
425 KOG0617 Ras suppressor protein 99.8 1E-22 2.2E-27 203.3 -6.5 186 65-280 30-220 (264)
426 PRK09188 serine/threonine prot 99.8 5.6E-20 1.2E-24 212.6 14.8 172 805-1019 17-194 (365)
427 KOG0618 Serine/threonine phosp 99.8 6.7E-22 1.4E-26 237.7 -2.5 220 42-269 242-488 (1081)
428 KOG4158 BRPK/PTEN-induced prot 99.8 1.3E-19 2.9E-24 200.6 13.3 216 867-1123 274-505 (598)
429 KOG0617 Ras suppressor protein 99.8 5E-22 1.1E-26 198.4 -7.1 184 86-300 28-216 (264)
430 KOG1240 Protein kinase contain 99.8 7.8E-20 1.7E-24 222.7 10.0 260 807-1128 24-291 (1431)
431 KOG0618 Serine/threonine phosp 99.8 7.9E-21 1.7E-25 228.6 -4.0 263 18-293 200-486 (1081)
432 cd05147 RIO1_euk RIO kinase fa 99.8 2.5E-18 5.5E-23 182.7 13.6 145 811-984 2-166 (190)
433 PF14531 Kinase-like: Kinase-l 99.8 2.2E-18 4.7E-23 191.9 12.0 255 807-1119 13-288 (288)
434 PRK10359 lipopolysaccharide co 99.8 4.1E-18 8.9E-23 184.5 12.8 183 806-1042 31-215 (232)
435 KOG0603 Ribosomal protein S6 k 99.7 3.3E-19 7.3E-24 209.4 3.1 237 813-1133 1-248 (612)
436 cd05145 RIO1_like RIO kinase f 99.7 1.3E-17 2.8E-22 177.2 14.9 146 811-986 2-168 (190)
437 PLN03210 Resistant to P. syrin 99.7 6.4E-17 1.4E-21 214.1 22.0 254 18-292 590-878 (1153)
438 PRK12274 serine/threonine prot 99.7 5.4E-17 1.2E-21 172.6 15.4 201 809-1052 5-210 (218)
439 PLN03210 Resistant to P. syrin 99.7 1.2E-16 2.5E-21 211.6 22.2 258 18-296 559-859 (1153)
440 KOG4237 Extracellular matrix p 99.7 1.6E-19 3.5E-24 200.4 -5.1 247 42-297 68-360 (498)
441 KOG0532 Leucine-rich repeat (L 99.7 1.3E-18 2.9E-23 200.3 -1.5 201 46-281 55-255 (722)
442 KOG0606 Microtubule-associated 99.7 2.4E-17 5.1E-22 201.7 8.3 161 938-1134 153-321 (1205)
443 PRK14879 serine/threonine prot 99.7 4E-16 8.7E-21 167.6 16.5 142 812-984 2-143 (211)
444 PRK10345 hypothetical protein; 99.7 3.2E-16 6.9E-21 168.8 14.3 144 809-982 5-156 (210)
445 KOG1023 Natriuretic peptide re 99.7 2.4E-16 5.3E-21 185.8 13.9 214 863-1131 1-223 (484)
446 TIGR03724 arch_bud32 Kae1-asso 99.7 1.2E-15 2.6E-20 162.4 16.8 138 813-984 1-138 (199)
447 KOG1166 Mitotic checkpoint ser 99.7 7.1E-16 1.5E-20 192.9 15.3 201 805-1047 697-901 (974)
448 cd00116 LRR_RI Leucine-rich re 99.6 3.1E-17 6.7E-22 186.9 1.7 248 21-271 2-292 (319)
449 PRK09605 bifunctional UGMP fam 99.6 1.5E-15 3.4E-20 186.2 16.8 145 805-984 332-476 (535)
450 smart00090 RIO RIO-like kinase 99.6 1.3E-15 2.8E-20 167.5 12.5 146 808-984 30-197 (237)
451 cd00116 LRR_RI Leucine-rich re 99.6 1.2E-16 2.7E-21 182.0 1.6 250 45-297 2-292 (319)
452 KOG1033 eIF-2alpha kinase PEK/ 99.6 4E-16 8.8E-21 180.6 5.8 186 896-1131 329-515 (516)
453 KOG0532 Leucine-rich repeat (L 99.6 6.6E-17 1.4E-21 186.5 -4.1 204 19-256 52-256 (722)
454 cd05144 RIO2_C RIO kinase fami 99.6 8.5E-15 1.9E-19 156.4 12.1 143 808-986 17-176 (198)
455 PRK01723 3-deoxy-D-manno-octul 99.5 1.4E-13 3.1E-18 151.6 14.6 146 811-983 36-190 (239)
456 COG4886 Leucine-rich repeat (L 99.5 1.6E-14 3.5E-19 170.5 7.5 193 73-271 98-291 (394)
457 KOG0590 Checkpoint kinase and 99.5 1.7E-15 3.7E-20 186.1 -4.3 267 804-1133 18-291 (601)
458 cd05119 RIO RIO kinase family, 99.5 3.2E-13 7E-18 142.2 12.8 142 811-985 2-164 (187)
459 COG4886 Leucine-rich repeat (L 99.5 8.6E-14 1.9E-18 164.3 8.6 200 45-253 97-297 (394)
460 cd05120 APH_ChoK_like Aminogly 99.4 9.8E-13 2.1E-17 131.3 11.3 132 810-984 2-138 (155)
461 PLN03150 hypothetical protein; 99.3 7.2E-12 1.6E-16 156.0 12.2 91 189-281 420-512 (623)
462 cd05146 RIO3_euk RIO kinase fa 99.2 1.2E-10 2.6E-15 124.0 13.3 143 811-985 2-174 (197)
463 KOG0531 Protein phosphatase 1, 99.2 1.5E-12 3.2E-17 155.1 -2.3 220 38-270 69-290 (414)
464 KOG1266 Protein kinase [Signal 99.2 2.4E-11 5.1E-16 133.3 6.9 214 861-1132 119-335 (458)
465 KOG0531 Protein phosphatase 1, 99.2 3.3E-12 7.2E-17 152.0 -0.3 238 20-271 75-319 (414)
466 PF14580 LRR_9: Leucine-rich r 99.2 1.4E-11 3.1E-16 128.6 4.3 130 37-171 15-147 (175)
467 KOG0601 Cyclin-dependent kinas 99.1 7.7E-11 1.7E-15 139.7 8.4 257 808-1132 116-383 (524)
468 KOG0606 Microtubule-associated 99.1 1.5E-11 3.2E-16 151.7 1.7 272 803-1134 801-1098(1205)
469 KOG1259 Nischarin, modulator o 99.1 1.4E-11 3.1E-16 133.1 1.4 201 68-280 214-419 (490)
470 KOG3207 Beta-tubulin folding c 99.1 1.6E-11 3.5E-16 139.2 1.5 203 67-271 120-340 (505)
471 TIGR01982 UbiB 2-polyprenylphe 99.1 1.6E-10 3.6E-15 138.1 9.9 149 812-987 123-309 (437)
472 PRK04750 ubiB putative ubiquin 99.1 1.4E-10 3E-15 140.6 8.2 166 805-987 119-316 (537)
473 cd05151 ChoK Choline Kinase (C 99.1 4.5E-10 9.8E-15 116.1 10.7 127 811-983 3-135 (170)
474 KOG3087 Serine/threonine prote 99.1 1.6E-09 3.6E-14 111.4 14.2 153 810-983 11-164 (229)
475 PF14580 LRR_9: Leucine-rich r 99.1 7.6E-11 1.6E-15 123.1 4.4 108 66-177 17-126 (175)
476 COG3642 Mn2+-dependent serine/ 99.1 1.6E-09 3.6E-14 112.0 13.9 138 812-983 2-139 (204)
477 KOG0601 Cyclin-dependent kinas 99.0 1.8E-10 3.8E-15 136.6 6.7 255 803-1134 262-520 (524)
478 KOG1259 Nischarin, modulator o 99.0 4.6E-11 1E-15 129.3 1.3 132 113-250 283-416 (490)
479 KOG3207 Beta-tubulin folding c 99.0 3.2E-11 7E-16 136.8 -1.0 207 38-249 118-342 (505)
480 KOG1909 Ran GTPase-activating 99.0 2.7E-11 5.8E-16 134.4 -3.6 233 38-270 27-311 (382)
481 KOG1909 Ran GTPase-activating 99.0 5E-11 1.1E-15 132.3 -2.8 229 18-246 31-311 (382)
482 KOG1243 Protein kinase [Genera 98.8 3.8E-08 8.3E-13 118.0 13.7 142 857-1045 57-199 (690)
483 PF01163 RIO1: RIO1 family; I 98.8 2.6E-08 5.7E-13 105.6 10.8 131 821-984 1-155 (188)
484 PLN03150 hypothetical protein; 98.8 8.3E-09 1.8E-13 128.8 7.9 106 166-271 420-529 (623)
485 KOG4658 Apoptotic ATPase [Sign 98.8 5E-09 1.1E-13 133.9 5.2 200 19-225 525-732 (889)
486 cd05154 ACAD10_11_like Acyl-Co 98.7 6.5E-08 1.4E-12 104.1 10.7 143 812-983 4-205 (223)
487 PRK15123 lipopolysaccharide co 98.7 3.5E-07 7.7E-12 102.5 16.7 150 819-983 35-193 (268)
488 KOG4658 Apoptotic ATPase [Sign 98.6 1.6E-08 3.5E-13 129.3 3.2 249 18-271 546-808 (889)
489 KOG4579 Leucine-rich repeat (L 98.6 3E-09 6.6E-14 104.2 -3.4 117 156-273 45-162 (177)
490 KOG1859 Leucine-rich repeat pr 98.6 5.8E-10 1.3E-14 132.4 -10.3 179 84-271 102-293 (1096)
491 PF13855 LRR_8: Leucine rich r 98.6 2.8E-08 6.1E-13 85.6 2.5 59 211-269 2-61 (61)
492 KOG3741 Poly(A) ribonuclease s 98.5 2.9E-06 6.4E-11 99.2 19.0 224 818-1131 288-524 (655)
493 COG0478 RIO-like serine/threon 98.5 4.8E-07 1E-11 99.1 10.4 141 809-984 94-251 (304)
494 PF13855 LRR_8: Leucine rich r 98.5 8.5E-08 1.8E-12 82.6 3.4 57 69-125 2-60 (61)
495 KOG1859 Leucine-rich repeat pr 98.5 5.8E-09 1.3E-13 124.1 -5.2 131 164-299 164-295 (1096)
496 PF06293 Kdo: Lipopolysacchari 98.5 1.1E-06 2.3E-11 95.0 12.5 111 855-984 57-170 (206)
497 KOG2137 Protein kinase [Signal 98.5 3.7E-08 8.1E-13 118.5 1.1 162 936-1133 107-270 (700)
498 COG4248 Uncharacterized protei 98.4 8.3E-06 1.8E-10 93.2 18.7 274 809-1131 14-299 (637)
499 PRK09902 hypothetical protein; 98.4 4.5E-06 9.8E-11 89.6 14.5 148 815-984 27-179 (216)
500 KOG4579 Leucine-rich repeat (L 98.3 2.6E-08 5.6E-13 97.8 -3.9 127 70-200 29-159 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.4e-59 Score=612.13 Aligned_cols=293 Identities=21% Similarity=0.206 Sum_probs=202.3
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcCCcEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLRNL 96 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~L~~L 96 (1141)
+++.|.+..|+++...+..|.++++|+.|+|++|.+++.+|..++.+ ++|+.|+|++|.++ .+|..+..+++|+.|
T Consensus 285 ~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l---~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L 361 (968)
T PLN00113 285 KLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSL---PRLQVLQLWSNKFSGEIPKNLGKHNNLTVL 361 (968)
T ss_pred CcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcC---CCCCEEECcCCCCcCcCChHHhCCCCCcEE
Confidence 45555555555555555555555555555555555555555444333 55555555555554 445555555555555
Q ss_pred EccCCCCC-cCch------------------------hhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCC
Q 001143 97 KFFGNEIN-LFPS------------------------EVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPR 150 (1141)
Q Consensus 97 ~Ls~N~L~-~lP~------------------------~~~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~N~ln 150 (1141)
+|++|+++ .+|. .++++++|+.|+|++|++. .+|..+..+++|+.|++++|.+
T Consensus 362 ~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l- 440 (968)
T PLN00113 362 DLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNL- 440 (968)
T ss_pred ECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcc-
Confidence 55555554 3444 4445555555555555532 3444455555555555555333
Q ss_pred CCcccchhhhcCCCCCcEEEccCCCCC-ccCccccCCCCCCEEEccCCccc-cccccccCCCCCCEEEccCCCCC-cCCc
Q 001143 151 PSVLTLLSEIAGLKCLTKLSVCHFSIR-YLPPEIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPS 227 (1141)
Q Consensus 151 ~~~~~lp~~l~~L~~L~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~-~IP~ 227 (1141)
.+.+|..+..+++|+.|+|++|++. .+|..+ .+++|+.|+|++|+++ .+|..+..+++|+.|+|++|+++ .+|.
T Consensus 441 --~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~ 517 (968)
T PLN00113 441 --QGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPD 517 (968)
T ss_pred --cCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCCh
Confidence 2334445556666666777776666 344433 4577888888888887 67888999999999999999998 7899
Q ss_pred CccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcccccccCC
Q 001143 228 GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEG 307 (1141)
Q Consensus 228 ~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~~~~~~~~ 307 (1141)
.+.++++|+.|+|++|++++.+|..|..+++|+.|+|++|++++ .+|..+.....+..+++++|.+.+..|. .
T Consensus 518 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~l~~L~~l~ls~N~l~~~~p~-----~ 590 (968)
T PLN00113 518 ELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSG--EIPKNLGNVESLVQVNISHNHLHGSLPS-----T 590 (968)
T ss_pred HHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccc--cCChhHhcCcccCEEeccCCcceeeCCC-----c
Confidence 99999999999999999999999999999999999999999998 6899999888899999999999998885 3
Q ss_pred CCCCCCCCCCcCCCC-CC
Q 001143 308 PMLENDGNVSFSESD-AG 324 (1141)
Q Consensus 308 ~~l~~~~~~sf~~n~-~~ 324 (1141)
..+.++...+|.||+ +|
T Consensus 591 ~~~~~~~~~~~~~n~~lc 608 (968)
T PLN00113 591 GAFLAINASAVAGNIDLC 608 (968)
T ss_pred chhcccChhhhcCCcccc
Confidence 445567778888884 45
No 2
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-45 Score=408.60 Aligned_cols=275 Identities=23% Similarity=0.301 Sum_probs=221.6
Q ss_pred CCCCCCC-ceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 801 DPGSFPS-LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 801 ~~~~~~~-y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
.+.++.+ |.+.+.||+|+||.|-+|.. .+..||+||+...+.......... ...+++|+++|++|+|||||+++++
T Consensus 166 ~pks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~-~~~v~~EieILkkL~HP~IV~~~d~ 244 (475)
T KOG0615|consen 166 PPKSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAK-TRDVQNEIEILKKLSHPNIVRIKDF 244 (475)
T ss_pred ccchhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccc-hhhhHHHHHHHHhcCCCCEEEEeee
Confidence 4555555 68999999999999999987 577899998654433222111111 1224799999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
|+..+.. ||||||++||+|.+.+-. .+.+.+...+.+++|++.|+.|||++||+||||||+
T Consensus 245 f~~~ds~--------------YmVlE~v~GGeLfd~vv~-----nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPe 305 (475)
T KOG0615|consen 245 FEVPDSS--------------YMVLEYVEGGELFDKVVA-----NKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPE 305 (475)
T ss_pred eecCCce--------------EEEEEEecCccHHHHHHh-----ccccccchhHHHHHHHHHHHHHHHHcCcccccCCcc
Confidence 9987644 999999999999999876 456888999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||+..+ .....+||+|||+|+...... ...+.+|||.|.|||++.... ...+..++|+||+||
T Consensus 306 NILl~~~----~e~~llKItDFGlAK~~g~~s-----------fm~TlCGTpsYvAPEVl~~kg-~~~~~~kVDiWSlGc 369 (475)
T KOG0615|consen 306 NILLSND----AEDCLLKITDFGLAKVSGEGS-----------FMKTLCGTPSYVAPEVLASKG-VEYYPSKVDIWSLGC 369 (475)
T ss_pred eEEeccC----CcceEEEecccchhhccccce-----------ehhhhcCCccccChhheecCC-eecccchheeeeccc
Confidence 9999765 234789999999998765321 123567999999999997632 233456999999999
Q ss_pred HHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLTLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+||-+++|.+||.+..... +.++|..+.....+..+. .++++..+||.+||..||
T Consensus 370 vLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~------------------------~Iseea~dlI~~mL~VdP 425 (475)
T KOG0615|consen 370 VLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWD------------------------RISEEALDLINWMLVVDP 425 (475)
T ss_pred eEEEEeccCCCcccccCCccHHHHHhcCcccccChhhh------------------------hhhHHHHHHHHHhhEeCc
Confidence 9999999999998754444 778888887655433221 678889999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001143 1117 TERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~s 1135 (1141)
++|||++|+|+|+|++..+
T Consensus 426 ~~R~s~~eaL~hpW~~~~~ 444 (475)
T KOG0615|consen 426 ENRPSADEALNHPWFKDAP 444 (475)
T ss_pred ccCcCHHHHhcChhhhccc
Confidence 9999999999999998654
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2.8e-44 Score=396.59 Aligned_cols=258 Identities=28% Similarity=0.428 Sum_probs=217.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCcc--EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGSAD--AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~--vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
.+..+++..+.||+|..|+||+++++.+. +|+|+..+. .... ++.++.+|+++++..+|||||.+||.|..
T Consensus 76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~---~~~~----~~~Qi~rEl~il~~~~spyIV~~ygaF~~ 148 (364)
T KOG0581|consen 76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN---IDPA----LQKQILRELEILRSCQSPYIVGFYGAFYS 148 (364)
T ss_pred cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc---CCHH----HHHHHHHHHHHHhhCCCCCeeeEeEEEEe
Confidence 34557889999999999999999997554 555554222 1222 23345899999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCe
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENI 959 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NI 959 (1141)
+.. ..+|+||||++|||++++.. .+++++...-+|+.+|++||.|||. ++||||||||+||
T Consensus 149 ~~~-------------~isI~mEYMDgGSLd~~~k~-----~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNl 210 (364)
T KOG0581|consen 149 NGE-------------EISICMEYMDGGSLDDILKR-----VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNL 210 (364)
T ss_pred CCc-------------eEEeehhhcCCCCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHe
Confidence 552 35999999999999999986 2579999999999999999999995 9999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.. |.|||||||.++.+... ...+++||..|||||.+.+ ..|+.++||||||+++
T Consensus 211 LvNsk-------GeVKicDFGVS~~lvnS------------~a~tfvGT~~YMsPERi~g----~~Ys~~sDIWSLGLsl 267 (364)
T KOG0581|consen 211 LVNSK-------GEVKICDFGVSGILVNS------------IANTFVGTSAYMSPERISG----ESYSVKSDIWSLGLSL 267 (364)
T ss_pred eeccC-------CCEEeccccccHHhhhh------------hcccccccccccChhhhcC----CcCCcccceecccHHH
Confidence 99987 89999999999876542 2246789999999999998 6899999999999999
Q ss_pred HHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 001143 1040 LELLTLQVPYMGL-----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE 1114 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~-----~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~ 1114 (1141)
+|+++|+.||... +..+++..|..+..|.++.. .+++++++|+..||++
T Consensus 268 lE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~--------------------------~fS~ef~~FV~~CL~K 321 (364)
T KOG0581|consen 268 LELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEG--------------------------EFSPEFRSFVSCCLRK 321 (364)
T ss_pred HHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcc--------------------------cCCHHHHHHHHHHhcC
Confidence 9999999999763 56677788877777665531 3677899999999999
Q ss_pred CCCCCCCHHHHHHHHHhhcC
Q 001143 1115 NPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1115 DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
||.+|||+.|+++|+|.+..
T Consensus 322 dp~~R~s~~qLl~Hpfi~~~ 341 (364)
T KOG0581|consen 322 DPSERPSAKQLLQHPFIKKF 341 (364)
T ss_pred CcccCCCHHHHhcCHHHhhc
Confidence 99999999999999999854
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-43 Score=408.58 Aligned_cols=258 Identities=26% Similarity=0.373 Sum_probs=220.1
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
++.. ..|...+.||+|+|+.+|.+++ .+..+|+|+...+.... ....+ ++.+||+|.++|+|||||+++++|
T Consensus 14 D~~~-~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k-~~~re----Kv~~EIeIHr~L~HpnIV~f~~~F 87 (592)
T KOG0575|consen 14 DPRS-KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKK-PKQRE----KVLNEIEIHRSLKHPNIVQFYHFF 87 (592)
T ss_pred cCCc-ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcC-cchHH----HHHHHHHHHHhcCCCcEEeeeeEe
Confidence 3444 6799999999999999999997 57788999865332222 22222 347999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
++.+++ |||.|+|+.++|..++++ .+++++.+++.+++||+.||.|||+++|+|||||..|
T Consensus 88 EDs~nV--------------YivLELC~~~sL~el~Kr-----rk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGN 148 (592)
T KOG0575|consen 88 EDSNNV--------------YIVLELCHRGSLMELLKR-----RKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGN 148 (592)
T ss_pred ecCCce--------------EEEEEecCCccHHHHHHh-----cCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhh
Confidence 988755 999999999999999986 5689999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
+|++++ .+|||+|||+|..+..... ...+.+|||.|.|||++.. ...+..+||||+||+
T Consensus 149 lfL~~~-------~~VKIgDFGLAt~le~~~E----------rk~TlCGTPNYIAPEVl~k----~gHsfEvDiWSlGcv 207 (592)
T KOG0575|consen 149 LFLNEN-------MNVKIGDFGLATQLEYDGE----------RKKTLCGTPNYIAPEVLNK----SGHSFEVDIWSLGCV 207 (592)
T ss_pred eeecCc-------CcEEecccceeeeecCccc----------ccceecCCCcccChhHhcc----CCCCCchhhhhhhhH
Confidence 999998 8999999999988764322 2236689999999999985 567899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|.|+.|++||...+..+.+..|......... ..+.++++||.++|+.||.+
T Consensus 208 mYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~----------------------------~ls~~A~dLI~~lL~~~P~~ 259 (592)
T KOG0575|consen 208 MYTLLVGRPPFETKTVKETYNKIKLNEYSMPS----------------------------HLSAEAKDLIRKLLRPNPSE 259 (592)
T ss_pred HHhhhhCCCCcccchHHHHHHHHHhcCccccc----------------------------ccCHHHHHHHHHHhcCCccc
Confidence 99999999999988888888888665432111 45667999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001143 1119 RPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~ 1132 (1141)
|||+++|+.|.||.
T Consensus 260 Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 260 RPSLDEVLDHPFFK 273 (592)
T ss_pred CCCHHHHhcCHhhh
Confidence 99999999999994
No 5
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.1e-44 Score=380.33 Aligned_cols=266 Identities=26% Similarity=0.420 Sum_probs=219.3
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee-Ee
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH-KI 879 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~-~~ 879 (1141)
+..+..+|++.++||+|+||+||++....+...++.+++.-...+....+.. ..|+.+|++|+|||||+++++ |.
T Consensus 14 ~~~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~----v~Ei~lLkQL~HpNIVqYy~~~f~ 89 (375)
T KOG0591|consen 14 PQKTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDC----VKEISLLKQLNHPNIVQYYAHSFI 89 (375)
T ss_pred CcccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHH----HHHHHHHHhcCCchHHHHHHHhhh
Confidence 4567788999999999999999999875444344433344222333333444 899999999999999999994 44
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH--CC--ccccCCC
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS--KH--IMHRDIK 955 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs--~g--IvHrDLK 955 (1141)
++.. .++||||||.+|+|..+|+.+... .+.+++..+++++.|+++||.++|+ .. |+|||||
T Consensus 90 ~~~e-------------vlnivmE~c~~GDLsqmIk~~K~q-kr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIK 155 (375)
T KOG0591|consen 90 EDNE-------------VLNIVMELCDAGDLSQMIKHFKKQ-KRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIK 155 (375)
T ss_pred ccch-------------hhHHHHHhhcccCHHHHHHHHHhc-cccCchHHHHHHHHHHHHHHHHHhccccccceeeccCc
Confidence 3332 258999999999999999976554 4689999999999999999999999 45 9999999
Q ss_pred CCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1035 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1035 (1141)
|.||+++.+ |.|||+|||+++.+..... .....+|||+||+||.+.+ ..|+.|+||||+
T Consensus 156 PaNIFl~~~-------gvvKLGDfGL~r~l~s~~t----------fA~S~VGTPyYMSPE~i~~----~~Y~~kSDiWsl 214 (375)
T KOG0591|consen 156 PANIFLTAN-------GVVKLGDFGLGRFLSSKTT----------FAHSLVGTPYYMSPERIHE----SGYNFKSDIWSL 214 (375)
T ss_pred chheEEcCC-------CceeeccchhHhHhcchhH----------HHHhhcCCCcccCHHHHhc----CCCCcchhHHHH
Confidence 999999988 8999999999998765332 2236789999999999987 789999999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1036 GCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
||++|||+.-++||.+.+..++...|..+..++++.. ..+.++..||..|+..|
T Consensus 215 GCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p~~--------------------------~YS~~l~~li~~ci~vd 268 (375)
T KOG0591|consen 215 GCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLPDE--------------------------HYSTDLRELINMCIAVD 268 (375)
T ss_pred HHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCcHH--------------------------HhhhHHHHHHHHHccCC
Confidence 9999999999999999999999999999988777643 56778999999999999
Q ss_pred CCCCCCHHHHHHHHHh
Q 001143 1116 PTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~ 1131 (1141)
|+.||+.-.++..+..
T Consensus 269 ~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 269 PEQRPDTVPYVQDIQS 284 (375)
T ss_pred cccCCCcchHHHHHHH
Confidence 9999996555555443
No 6
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4e-42 Score=381.96 Aligned_cols=270 Identities=24% Similarity=0.390 Sum_probs=213.6
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
....+.+|.+.++||+|+||+||+|+++.+...|+||.+.+..-.....+. +..|+.+|+.++|||||++++++..
T Consensus 5 ~~~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~----L~~Ei~iLkel~H~nIV~l~d~~~~ 80 (429)
T KOG0595|consen 5 SMRVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVEL----LLSEIKILKELKHPNIVRLLDCIED 80 (429)
T ss_pred cccccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHH----HHHHHHHHHhcCCcceeeEEEEEec
Confidence 345678899999999999999999998655445555444443223333333 3899999999999999999999998
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
++++ |||||||.||+|.++|++ .+.+++..++.++.||+.||++||+++||||||||+|||
T Consensus 81 ~~~i--------------~lVMEyC~gGDLs~yi~~-----~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiL 141 (429)
T KOG0595|consen 81 DDFI--------------YLVMEYCNGGDLSDYIRR-----RGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNIL 141 (429)
T ss_pred CCeE--------------EEEEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEE
Confidence 7754 999999999999999997 347999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++..... .....+||+|||+|+.+.... ...+.+|++.|||||++.. ..|+.|+|+||+|+++|
T Consensus 142 Ls~~~~~-~~~~~LKIADFGfAR~L~~~~-----------~a~tlcGSplYMAPEV~~~----~~YdAKADLWSiG~Ily 205 (429)
T KOG0595|consen 142 LSTTARN-DTSPVLKIADFGFARFLQPGS-----------MAETLCGSPLYMAPEVIMS----QQYDAKADLWSIGTILY 205 (429)
T ss_pred eccCCCC-CCCceEEecccchhhhCCchh-----------HHHHhhCCccccCHHHHHh----ccccchhhHHHHHHHHH
Confidence 9875211 111679999999999876422 1235679999999999976 68999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|+.||...+..++...+..+..... ..+...+..+.+++...++.+|.+|.
T Consensus 206 q~l~g~~Pf~a~t~~eL~~~~~k~~~~~~-------------------------~~~~~~s~~~~~Ll~~ll~~~~~~~~ 260 (429)
T KOG0595|consen 206 QCLTGKPPFDAETPKELLLYIKKGNEIVP-------------------------VLPAELSNPLRELLISLLQRNPKDRI 260 (429)
T ss_pred HHHhCCCCccccCHHHHHHHHhccccccC-------------------------chhhhccCchhhhhhHHHhcCccccC
Confidence 99999999999999998887765543211 01113334466778888888888888
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
++.+-..|.+....
T Consensus 261 ~~~~~~~~~~l~~~ 274 (429)
T KOG0595|consen 261 SFEDFFDHPFLAAN 274 (429)
T ss_pred chHHhhhhhhcccC
Confidence 88877777665543
No 7
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-42 Score=394.63 Aligned_cols=263 Identities=30% Similarity=0.456 Sum_probs=217.2
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCcc-EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGSAD-AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~-vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..++.++.+.+.||+|+||+||+|.|.+.. ||+|++.-. ....... ..|.+|+.+|.+++|||||+++|++.+
T Consensus 37 ~i~~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~--~~~~~~~----~~f~~E~~il~~l~HpNIV~f~G~~~~ 110 (362)
T KOG0192|consen 37 EIDPDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDP--DFDDESR----KAFRREASLLSRLRHPNIVQFYGACTS 110 (362)
T ss_pred ecChHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecch--hcChHHH----HHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence 344566778888999999999999999988 899886432 2222223 345899999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCCCCe
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH-IMHRDIKSENI 959 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g-IvHrDLKP~NI 959 (1141)
... ..+|||||+++|+|..+++.. ....+++..+.+|+.||++||+|||+++ ||||||||+||
T Consensus 111 ~~~-------------~~~iVtEy~~~GsL~~~l~~~---~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~Ni 174 (362)
T KOG0192|consen 111 PPG-------------SLCIVTEYMPGGSLSVLLHKK---RKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNI 174 (362)
T ss_pred CCC-------------ceEEEEEeCCCCcHHHHHhhc---ccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhE
Confidence 541 359999999999999999863 3457999999999999999999999999 99999999999
Q ss_pred eeecccccCCCCC-eEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 960 LIDLERKKADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 960 Lld~~~~~~~~~~-~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
|++.+ + ++||+|||+++....... ......||+.|||||++.+. ...|+.|+||||||++
T Consensus 175 Lv~~~-------~~~~KI~DFGlsr~~~~~~~----------~~~~~~GT~~wMAPEv~~~~--~~~~~~K~DvySFgIv 235 (362)
T KOG0192|consen 175 LVDLK-------GKTLKIADFGLSREKVISKT----------SMTSVAGTYRWMAPEVLRGE--KSPYTEKSDVYSFGIV 235 (362)
T ss_pred EEcCC-------CCEEEECCCccceeeccccc----------cccCCCCCccccChhhhcCC--CCcCCccchhhhHHHH
Confidence 99987 6 999999999976543210 11235699999999999853 3679999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|||+||+.||.+....++...+ ..+.+|.++. .+++.+..++.+||..||.
T Consensus 236 lWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~---------------------------~~~~~l~~l~~~CW~~dp~ 288 (362)
T KOG0192|consen 236 LWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPK---------------------------ECPPHLSSLMERCWLVDPS 288 (362)
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCc---------------------------cCCHHHHHHHHHhCCCCCC
Confidence 99999999999998886666555 4666555443 3566799999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001143 1118 ERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~ 1132 (1141)
+||++.+++..+...
T Consensus 289 ~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 289 RRPSFLEIVSRLESI 303 (362)
T ss_pred cCCCHHHHHHHHHHH
Confidence 999999999988754
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-42 Score=378.88 Aligned_cols=261 Identities=27% Similarity=0.322 Sum_probs=219.2
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+++|++.++||+|+||.||+++.. ++-+|+|+.+.+..... .+.+ ....|..+|.+++||.||+++-.|+
T Consensus 21 ~~~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~-~e~~----~~~~Er~IL~~v~hPFiv~l~ysFQ 95 (357)
T KOG0598|consen 21 MVGPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEK-KEVR----HTKAERNILSKIKHPFIVKLIYSFQ 95 (357)
T ss_pred cCChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhh-hhHH----HHHHHHHHHHhCCCCcEeeeEEecc
Confidence 456789999999999999999999874 55677777443322222 2223 3379999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+... +|+|+||+.||.|..+|++ .+.+++..++.++.+|+.||.|||++|||||||||+||
T Consensus 96 t~~k--------------LylVld~~~GGeLf~hL~~-----eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENI 156 (357)
T KOG0598|consen 96 TEEK--------------LYLVLDYLNGGELFYHLQR-----EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENI 156 (357)
T ss_pred cCCe--------------EEEEEeccCCccHHHHHHh-----cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHe
Confidence 7664 4999999999999999987 45799999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|+|.+ |+++|+|||+|+..-... ....+++||+.|||||++.+ ..|+..+|+||+|+++
T Consensus 157 LLd~~-------GHi~LtDFgL~k~~~~~~----------~~t~tfcGT~eYmAPEil~~----~gy~~~vDWWsLGill 215 (357)
T KOG0598|consen 157 LLDEQ-------GHIKLTDFGLCKEDLKDG----------DATRTFCGTPEYMAPEILLG----KGYDKAVDWWSLGILL 215 (357)
T ss_pred eecCC-------CcEEEeccccchhcccCC----------CccccccCCccccChHHHhc----CCCCcccchHhHHHHH
Confidence 99998 999999999997533221 12335789999999999997 6899999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|||++|.+||.+.+...+.+.|..+..+..+. ..+.+.++++.++|..||++|
T Consensus 216 YeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~---------------------------~ls~~ardll~~LL~rdp~~R 268 (357)
T KOG0598|consen 216 YEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG---------------------------YLSEEARDLLKKLLKRDPRQR 268 (357)
T ss_pred HHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc---------------------------cCCHHHHHHHHHHhccCHHHh
Confidence 99999999999999888999988776433321 245568999999999999999
Q ss_pred C----CHHHHHHHHHhhcC
Q 001143 1120 P----TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 P----Sa~ElL~~L~~~~~ 1134 (1141)
. ++.+|-+|++|..-
T Consensus 269 Lg~~~d~~~ik~HpfF~~i 287 (357)
T KOG0598|consen 269 LGGPGDAEEIKRHPFFKGI 287 (357)
T ss_pred cCCCCChHHhhcCcccccC
Confidence 4 79999999999754
No 9
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-42 Score=389.29 Aligned_cols=287 Identities=23% Similarity=0.271 Sum_probs=223.1
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~~ 883 (1141)
.++|.+.++||.|+||.||+|+.......|+||+.+......++.-+ +||+..|++|. |||||++.+.+.+.+.
T Consensus 9 m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~n-----LREvksL~kln~hpniikL~Evi~d~~~ 83 (538)
T KOG0661|consen 9 MDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMN-----LREVKSLRKLNPHPNIIKLKEVIRDNDR 83 (538)
T ss_pred HHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHH-----HHHHHHHHhcCCCCcchhhHHHhhccCc
Confidence 46799999999999999999998554444555556655555444444 59999999998 9999999999987541
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
++|+|||||+ .+|++++++ . ...|++..++.|++||++||+|+|.+|+.|||+||+|||+..
T Consensus 84 -------------~L~fVfE~Md-~NLYqLmK~---R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~ 145 (538)
T KOG0661|consen 84 -------------ILYFVFEFMD-CNLYQLMKD---R-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISG 145 (538)
T ss_pred -------------eEeeeHHhhh-hhHHHHHhh---c-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecc
Confidence 4699999997 899999987 2 568999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
. ..+||+|||+|+.+.... .....+.|.+|+|||++.. ...|+.++||||+|||++|+.
T Consensus 146 ~-------~~iKiaDFGLARev~Skp-----------PYTeYVSTRWYRAPEvLLr---s~~Ys~pvD~wA~GcI~aEl~ 204 (538)
T KOG0661|consen 146 N-------DVIKIADFGLAREVRSKP-----------PYTEYVSTRWYRAPEVLLR---SGYYSSPVDMWAVGCIMAELY 204 (538)
T ss_pred c-------ceeEecccccccccccCC-----------CcchhhhcccccchHHhhh---ccccCCchHHHHHHHHHHHHH
Confidence 5 689999999998765422 2345678999999999986 468999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHH-HhCCCCCchhHHh---hhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLI-QMGKRPRLTDELE---ALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+-++.|.|.++.+.+.+| ...+.|....... ........ +.+ ..+......-..++.++.++|.+|+.+||.+|
T Consensus 205 sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~-~P~-~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kR 282 (538)
T KOG0661|consen 205 SLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFR-FPQ-VKPSPLKDLLPNASSEAASLIERLLAWDPDKR 282 (538)
T ss_pred HhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccC-CCc-CCCCChHHhCcccCHHHHHHHHHHhcCCCccC
Confidence 999999999888766666 3333333221111 01000111 111 11111122223578889999999999999999
Q ss_pred CCHHHHHHHHHhhcCCCC
Q 001143 1120 PTAGDLYEMFVARTSSSI 1137 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~s~~ 1137 (1141)
|||.|+++|++|+.....
T Consensus 283 pTA~~al~~pffq~~~~~ 300 (538)
T KOG0661|consen 283 PTASQALQHPFFQVGRAS 300 (538)
T ss_pred ccHHHHhcCccccccccc
Confidence 999999999999866444
No 10
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8.2e-42 Score=365.11 Aligned_cols=284 Identities=24% Similarity=0.343 Sum_probs=216.5
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
+.|+...++|+|+||+||+++++.+...|+|++.....++ +..+.+ .++|+++|++++|||+|.++++|.....
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd-~~VkKI---AlREIrmLKqLkH~NLVnLiEVFrrkrk-- 75 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDD-PVVKKI---ALREIRMLKQLKHENLVNLIEVFRRKRK-- 75 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCcc-HHHHHH---HHHHHHHHHhcccchHHHHHHHHHhcce--
Confidence 4688899999999999999998665555555444433322 333333 4899999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
.++|+|||+ .++.+-+.+ .+ ..++...++++++|++.|+.|+|++++|||||||+||||+.+
T Consensus 76 ------------lhLVFE~~d-hTvL~eLe~---~p-~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~- 137 (396)
T KOG0593|consen 76 ------------LHLVFEYCD-HTVLHELER---YP-NGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQN- 137 (396)
T ss_pred ------------eEEEeeecc-hHHHHHHHh---cc-CCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecC-
Confidence 499999998 444444443 22 358999999999999999999999999999999999999988
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.+||||||+|+.+..+... ....+.|.+|+|||.+.+ ...|+..+||||+||++.||++|
T Consensus 138 ------gvvKLCDFGFAR~L~~pgd~----------YTDYVATRWYRaPELLvG---DtqYG~pVDiWAiGCv~aEl~~G 198 (396)
T KOG0593|consen 138 ------GVVKLCDFGFARTLSAPGDN----------YTDYVATRWYRAPELLVG---DTQYGKPVDIWAIGCVFAELLTG 198 (396)
T ss_pred ------CcEEeccchhhHhhcCCcch----------hhhhhhhhhccChhhhcc---cCcCCCcccchhhhHHHHHHhcC
Confidence 89999999999987643322 234578999999999998 46899999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC-ccccc--cccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-HEHEV--AQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
.+.|.+.++.+....|.....+-++......... .+..+ .+....-..+...+..+..+.+|+..||+.||++|++.
T Consensus 199 ~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc 278 (396)
T KOG0593|consen 199 EPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSC 278 (396)
T ss_pred CcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccH
Confidence 9999999888877777554444444433322211 11111 11111111111223566788999999999999999999
Q ss_pred HHHHHHHHhh
Q 001143 1123 GDLYEMFVAR 1132 (1141)
Q Consensus 1123 ~ElL~~L~~~ 1132 (1141)
+|++.|.+|.
T Consensus 279 ~qll~H~yFd 288 (396)
T KOG0593|consen 279 EQLLHHPYFD 288 (396)
T ss_pred HHHhcChHHH
Confidence 9999999883
No 11
>PF14381 EDR1: Ethylene-responsive protein kinase Le-CTR1
Probab=100.00 E-value=4e-42 Score=361.47 Aligned_cols=182 Identities=36% Similarity=0.517 Sum_probs=145.2
Q ss_pred CcccccccccccccccCCCCCccccCCCCC----------CcccccccccC-CCCCcceEEEecccCCHHHHHHHHHHHH
Q 001143 520 SNASQKYSSVSFCSIEDRLPDGFYDAGRDR----------PFMQLTGYEQT-PHLDSREVILVDRKSDEELDAIALSAQA 588 (1141)
Q Consensus 520 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (1141)
..+|||||++|+|+|+|||||||||++++. .+-+|++++.. +.++++|||||||..|+.|++|+++|+.
T Consensus 4 e~lS~r~W~~~~L~y~dki~DGFYdi~g~~~~~~l~~~~~~~Psl~~L~~~~~~~~~~EvIlVDr~~D~~L~~L~~~a~~ 83 (204)
T PF14381_consen 4 ESLSHRYWVNGCLSYDDKIPDGFYDIYGMDCTNSLKEEFGRMPSLEDLQAVPPDDSSREVILVDRRRDPSLKELEQRAHE 83 (204)
T ss_pred HHHHHHHHHcCCCCCCCcCCCCCcccccCCCccccccccCCCCCHHHHhcCCCCCCCeeEEEEccccCHHHHHHHHHHHH
Confidence 468999999999999999999999886652 11225555543 6899999999999999999999999999
Q ss_pred HHHHhhccCCccccCcccccchHHHHHHHHHHHhhhcCCCcCCcccccccccccCCCCCCCcccccCCCCCCCcchhhHH
Q 001143 589 LVLHLKQLNGLTKDGVIEPVDNLQIALLLALFVSDHFGGSDRSGIVERTRKTVSGSNYRKPFVCTCSTGNSDSANTSQKQ 668 (1141)
Q Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 668 (1141)
+...+. .+..+++.+||.+||++|||++..++ .
T Consensus 84 ~~~~~~-------------~~~~~~v~~LA~lVa~~MGG~~~~~~----------------------------------~ 116 (204)
T PF14381_consen 84 LSKGLS-------------TNTKELVQKLAKLVADRMGGPVSDAE----------------------------------D 116 (204)
T ss_pred HHhccc-------------cCHHHHHHHHHHHHHHHhCCCCCcch----------------------------------h
Confidence 997631 13578899999999999999984331 1
Q ss_pred HHHHHHHHHhhhHHHHHHHHHhhccCceeEeccccccchhhhhHHHHHHhhhccCCCCcccccccccccCC-CCcceeEE
Q 001143 669 ILDAVEDIVLSDLCEKSLRSIKSKRNSVVVPIGSVQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDFQP-HAWNTILV 747 (1141)
Q Consensus 669 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~~~-~~~~~~~~ 747 (1141)
...+ |+...+.+|. ++.+||||+|++|+|||||||||+|||+|+ ||||||||++||+. ..-..++|
T Consensus 117 ~~~~---------w~~~s~~lk~--~s~~vplG~l~~G~~rhRALLFKvLAD~ig--lpCrLvrG~~y~g~~~~~a~~~V 183 (204)
T PF14381_consen 117 MLFR---------WELRSEKLKE--NSGVVPLGSLRIGLCRHRALLFKVLADRIG--LPCRLVRGCYYCGWDDDDASNLV 183 (204)
T ss_pred hhHH---------HHHHHHHHHh--CCCeEEEeeecccchHHHHHHHHHHHHhcC--CCceEEeeccCCccCCCCceEEE
Confidence 1123 4555555666 999999999999999999999999999999 99999999999976 22233556
Q ss_pred eeCChhhhhhhhhcC
Q 001143 748 KKGDSWIRMIVDACR 762 (1141)
Q Consensus 748 ~~~~~~~~~~~~~~~ 762 (1141)
+.++ ..++++|.+.
T Consensus 184 ~~~~-~~eyiVDLm~ 197 (204)
T PF14381_consen 184 KFDD-GREYIVDLMG 197 (204)
T ss_pred EcCC-CcEEEEEcCC
Confidence 6554 4678888874
No 12
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-41 Score=383.62 Aligned_cols=269 Identities=24% Similarity=0.277 Sum_probs=220.6
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~ 878 (1141)
..+..+|.+++.||+|+|++|++|+.. +..+|+|| +.+...- .+.-...+.+|-.+|.+| .||.|+++|-.|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKV--l~K~~Ii---ke~KvkYV~~Ek~~l~~L~~hPgivkLy~TF 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKV--LDKRYII---KEKKVKYVTREKEALTQLSGHPGIVKLYFTF 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhh--hhHHHHH---hhcccchhhHHHHHHHHhhCCCCeEEEEEEe
Confidence 567889999999999999999999974 56677777 3322111 111122347899999999 799999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.++..+ |+|+||+++|+|.++|++ .+.|++..++.++.||+.||+|||++|||||||||+|
T Consensus 144 QD~~sL--------------YFvLe~A~nGdll~~i~K-----~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPEN 204 (604)
T KOG0592|consen 144 QDEESL--------------YFVLEYAPNGDLLDLIKK-----YGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPEN 204 (604)
T ss_pred ecccce--------------EEEEEecCCCcHHHHHHH-----hCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhh
Confidence 987654 999999999999999998 3579999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccc---cccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCC---IAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1035 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~---~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1035 (1141)
||+|.+ +++||.|||.|+.+........ ...........++||..|.+||++.+ ...++.+|+|||
T Consensus 205 ILLd~d-------mhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~----~~~~~~sDiWAl 273 (604)
T KOG0592|consen 205 ILLDKD-------GHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLND----SPAGPSSDLWAL 273 (604)
T ss_pred eeEcCC-------CcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcC----CCCCcccchHHH
Confidence 999999 8999999999998765433211 00111111256899999999999987 677899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1036 GCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
||+||+|+.|++||.+.++.-+++.|......-. ...++.+++|+.++|..|
T Consensus 274 GCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp----------------------------~~fp~~a~dLv~KLLv~d 325 (604)
T KOG0592|consen 274 GCILYQMLAGQPPFRAANEYLIFQKIQALDYEFP----------------------------EGFPEDARDLIKKLLVRD 325 (604)
T ss_pred HHHHHHHhcCCCCCccccHHHHHHHHHHhcccCC----------------------------CCCCHHHHHHHHHHHccC
Confidence 9999999999999999988888888765433211 144567999999999999
Q ss_pred CCCCCCHHHHHHHHHhhc
Q 001143 1116 PTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~~ 1133 (1141)
|.+|+|+.||-+|+||..
T Consensus 326 p~~Rlt~~qIk~HpFF~~ 343 (604)
T KOG0592|consen 326 PSDRLTSQQIKAHPFFEG 343 (604)
T ss_pred ccccccHHHHhhCccccc
Confidence 999999999999999964
No 13
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-40 Score=369.59 Aligned_cols=276 Identities=25% Similarity=0.367 Sum_probs=224.7
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+....+|++.++||.|..++||+|+. .+..||+|+..++.+... ...+ .+|+..|+.++||||++++..|.
T Consensus 22 p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~---ld~l----~kE~~~msl~~HPNIv~~~~sFv 94 (516)
T KOG0582|consen 22 PLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND---LDAL----RKEVQTMSLIDHPNIVTYHCSFV 94 (516)
T ss_pred CCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh---HHHH----HHHHHHhhhcCCCCcceEEEEEE
Confidence 34467899999999999999999998 467788888877765322 3444 79999999999999999999999
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.+..+ |+||+||.+||+.++++..+..+ +++..+..|++++++||.|||.+|.||||||+.||
T Consensus 95 v~~~L--------------WvVmpfMa~GS~ldIik~~~~~G---l~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnI 157 (516)
T KOG0582|consen 95 VDSEL--------------WVVMPFMAGGSLLDIIKTYYPDG---LEEASIATILREVLKALDYLHQNGHIHRDVKAGNI 157 (516)
T ss_pred eccee--------------EEeehhhcCCcHHHHHHHHcccc---ccHHHHHHHHHHHHHHHHHHHhcCceecccccccE
Confidence 87755 99999999999999999876654 99999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
||+.+ |.|||+|||.+..+....... .... ..++||++|||||++... ...|+.|+||||||++.
T Consensus 158 Li~~d-------G~VkLadFgvsa~l~~~G~R~-----~~rf-~tfvgtp~wmAPEvl~q~--~~GYdfKaDIwSfGITA 222 (516)
T KOG0582|consen 158 LIDSD-------GTVKLADFGVSASLFDSGDRQ-----VTRF-NTFVGTPCWMAPEVLMQQ--LHGYDFKADIWSFGITA 222 (516)
T ss_pred EEcCC-------CcEEEcCceeeeeecccCcee-----eEee-ccccCcccccChHHhhhc--ccCccchhhhhhhhHHH
Confidence 99998 899999999887655432111 0111 567899999999996553 35799999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
.||++|..||....++++.-.-.++..|.+.. . ....+.....+..+++++..||+.||.+|
T Consensus 223 ~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t--~----------------~~~~d~~k~~~ksf~e~i~~CL~kDP~kR 284 (516)
T KOG0582|consen 223 CELAHGHAPFSKYPPMKVLLLTLQNDPPTLLT--S----------------GLDKDEDKKFSKSFREMIALCLVKDPSKR 284 (516)
T ss_pred HHHhcCCCCcccCChHHHHHHHhcCCCCCccc--c----------------cCChHHhhhhcHHHHHHHHHHhhcCcccC
Confidence 99999999999988888765555555543220 0 00111112445679999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
|||+++++|.||+..
T Consensus 285 ptAskLlkh~FFk~~ 299 (516)
T KOG0582|consen 285 PTASKLLKHAFFKKA 299 (516)
T ss_pred CCHHHHhccHHHhhc
Confidence 999999999999864
No 14
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-41 Score=388.44 Aligned_cols=261 Identities=26% Similarity=0.449 Sum_probs=219.5
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
...|...++||+|+.|.||.|+...+...|||+++....... ++ .+..|+.+|+..+|+|||.+++.|...+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~---ke---LilnEi~Vm~~~~H~NiVnfl~Sylv~d-- 343 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPK---KE---LLLNEILVMRDLHHPNIVNFLDSYLVGD-- 343 (550)
T ss_pred hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCc---hh---hhHHHHHHHHhccchHHHHHHHHhcccc--
Confidence 345788899999999999999986555455555444332222 11 2479999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.+|+||||++||+|.+.+.. ..+++.++..|.++++.||+|||.+||+|||||.+|||++.+
T Consensus 344 ------------eLWVVMEym~ggsLTDvVt~------~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~ 405 (550)
T KOG0578|consen 344 ------------ELWVVMEYMEGGSLTDVVTK------TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMD 405 (550)
T ss_pred ------------eeEEEEeecCCCchhhhhhc------ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccC
Confidence 35999999999999999976 359999999999999999999999999999999999999988
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||+|..+.... ......+|||+|||||+... ..|++|+||||||++++||+-
T Consensus 406 -------g~vKltDFGFcaqi~~~~----------~KR~TmVGTPYWMAPEVvtr----k~YG~KVDIWSLGIMaIEMve 464 (550)
T KOG0578|consen 406 -------GSVKLTDFGFCAQISEEQ----------SKRSTMVGTPYWMAPEVVTR----KPYGPKVDIWSLGIMAIEMVE 464 (550)
T ss_pred -------CcEEEeeeeeeecccccc----------CccccccCCCCccchhhhhh----cccCccccchhhhhHHHHHhc
Confidence 889999999998765422 24457899999999999986 789999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|++||...++......|.....|.+... ...+..+++|+.+||+.||.+|++|.|
T Consensus 465 GEPPYlnE~PlrAlyLIa~ng~P~lk~~-------------------------~klS~~~kdFL~~cL~~dv~~RasA~e 519 (550)
T KOG0578|consen 465 GEPPYLNENPLRALYLIATNGTPKLKNP-------------------------EKLSPELKDFLDRCLVVDVEQRASAKE 519 (550)
T ss_pred CCCCccCCChHHHHHHHhhcCCCCcCCc-------------------------cccCHHHHHHHHHHhhcchhcCCCHHH
Confidence 9999998888888888877776665421 156778999999999999999999999
Q ss_pred HHHHHHhhcCCCC
Q 001143 1125 LYEMFVARTSSSI 1137 (1141)
Q Consensus 1125 lL~~L~~~~~s~~ 1137 (1141)
+|+|+|+......
T Consensus 520 LL~HpFl~~a~p~ 532 (550)
T KOG0578|consen 520 LLEHPFLKMAKPE 532 (550)
T ss_pred HhcChhhhhcCCH
Confidence 9999999765443
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.3e-40 Score=349.47 Aligned_cols=289 Identities=20% Similarity=0.234 Sum_probs=220.5
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
.+|...++||+|+||.||+|++..+...|+||+++.... .+.+.....+|+..|+.++||||+.++++|...+.+
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~----kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l- 76 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNA----KDGINRTALREIKLLQELKHPNIIELIDVFPHKSNL- 76 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeecccc----ccCccHHHHHHHHHHHHccCcchhhhhhhccCCCce-
Confidence 468889999999999999999965554455544544321 122333458999999999999999999999876644
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
.||+||++ .+|+..|++ ....++..+++.|+.++++||+|||++.|+||||||.|+|++.+
T Consensus 77 -------------~lVfEfm~-tdLe~vIkd----~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~- 137 (318)
T KOG0659|consen 77 -------------SLVFEFMP-TDLEVVIKD----KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSD- 137 (318)
T ss_pred -------------EEEEEecc-ccHHHHhcc----cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCC-
Confidence 89999998 899999986 35689999999999999999999999999999999999999998
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.+||+|||+|+.+...... ....+-|.+|+|||.+.|. ..|+..+||||.||++.||+-|
T Consensus 138 ------g~lKiADFGLAr~f~~p~~~----------~~~~V~TRWYRAPELLfGs---r~Yg~~VDmWavGCI~AELllr 198 (318)
T KOG0659|consen 138 ------GQLKIADFGLARFFGSPNRI----------QTHQVVTRWYRAPELLFGS---RQYGTGVDMWAVGCIFAELLLR 198 (318)
T ss_pred ------CcEEeecccchhccCCCCcc----------cccceeeeeccChHHhccc---hhcCCcchhhhHHHHHHHHHcc
Confidence 89999999999987654322 1123679999999999984 5789999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
.+-|.+.++.+....|...-..+.++.++...........+.............++.++.+|+.+||.+||.+|+|+.|+
T Consensus 199 ~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qa 278 (318)
T KOG0659|consen 199 VPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQA 278 (318)
T ss_pred CCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHH
Confidence 99899988888777774333222232333222211111111000001111222556778999999999999999999999
Q ss_pred HHHHHhhcCCCC
Q 001143 1126 YEMFVARTSSSI 1137 (1141)
Q Consensus 1126 L~~L~~~~~s~~ 1137 (1141)
++|.||.+.+..
T Consensus 279 L~~~yf~~~P~p 290 (318)
T KOG0659|consen 279 LKHPYFKSLPLP 290 (318)
T ss_pred hcchhhhcCCCC
Confidence 999999875443
No 16
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-40 Score=377.67 Aligned_cols=294 Identities=21% Similarity=0.251 Sum_probs=225.3
Q ss_pred CCCCCCCCCCceEeeeecccCceEEEEEEECCcc--EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCcccee
Q 001143 798 SGLDPGSFPSLSSCDEAGKSVSSSLFRCKFGSAD--AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMY 875 (1141)
Q Consensus 798 ~~~~~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~--vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkll 875 (1141)
.+|.+...+.|+..++||+|+||.||+|++..+. ||+|-.+++.. ...|.....+||.||++|.||||+++.
T Consensus 109 ~~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~------~~~~~~t~~REI~ILr~l~HpNIikL~ 182 (560)
T KOG0600|consen 109 HGWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE------KEGFPITAIREIKILRRLDHPNIIKLE 182 (560)
T ss_pred ccccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC------CCcchHHHHHHHHHHHhcCCCccccee
Confidence 3667777888999999999999999999986555 66665444321 123334457999999999999999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 955 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLK 955 (1141)
+.+.+.. ...+|||+|||+ .+|..++.. +...|++.+++.|++||+.||+|+|++||+|||||
T Consensus 183 eivt~~~------------~~siYlVFeYMd-hDL~GLl~~----p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK 245 (560)
T KOG0600|consen 183 EIVTSKL------------SGSIYLVFEYMD-HDLSGLLSS----PGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIK 245 (560)
T ss_pred eEEEecC------------CceEEEEEeccc-chhhhhhcC----CCcccChHHHHHHHHHHHHHHHHHhhcCeeecccc
Confidence 9998752 124699999998 799888864 45689999999999999999999999999999999
Q ss_pred CCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1035 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1035 (1141)
.+|||||.+ |.+||+|||+|+.+...... .....+-|.+|+|||.+.| ...|+.++|+||.
T Consensus 246 ~SNiLidn~-------G~LKiaDFGLAr~y~~~~~~---------~~T~rVvTLWYRpPELLLG---~t~Yg~aVDlWS~ 306 (560)
T KOG0600|consen 246 GSNILIDNN-------GVLKIADFGLARFYTPSGSA---------PYTSRVVTLWYRPPELLLG---ATSYGTAVDLWSV 306 (560)
T ss_pred ccceEEcCC-------CCEEeccccceeeccCCCCc---------ccccceEEeeccChHHhcC---Ccccccceeehhh
Confidence 999999988 89999999999876543221 1335678999999999998 4679999999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCC--chhhhhhHHHHHHHHHHhcc
Q 001143 1036 GCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK--PEAELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~dLI~~cL~ 1113 (1141)
||||.||++|++.|++.++.+.++.|......+-...+... ........+....+.. .+.....+....+|+..||.
T Consensus 307 GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~-kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ 385 (560)
T KOG0600|consen 307 GCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS-KLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLS 385 (560)
T ss_pred hHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc-cCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhc
Confidence 99999999999999999988888888433322222222211 1111111111111111 11122456778999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001143 1114 ENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.||.+|.||.++|++.||.+.
T Consensus 386 ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 386 LDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred cCccccccHHHHhcCcccccC
Confidence 999999999999999999544
No 17
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-40 Score=351.69 Aligned_cols=259 Identities=26% Similarity=0.344 Sum_probs=219.5
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+..+++|++.+.||.|+||.|.+++. .+..+|+|+...... ....+.+ ...+|..+|+.+.||+++++++.+.
T Consensus 40 ~~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~v-VklKQve----H~~nEk~vL~~v~~PFlv~l~~t~~ 114 (355)
T KOG0616|consen 40 PYSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKV-VKLKQVE----HTHNEKRVLKAVSHPFLVKLYGTFK 114 (355)
T ss_pred CcchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHH-HHHHHHH----HHhhHHHHHhhccCceeEEEEEeec
Confidence 37789999999999999999999987 466778887432211 1112222 3379999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.+. +|+||||++||.|.+++++ .+++++..++.++.||+.||+|||+.+|++|||||+||
T Consensus 115 d~~~--------------lymvmeyv~GGElFS~Lrk-----~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENi 175 (355)
T KOG0616|consen 115 DNSN--------------LYMVMEYVPGGELFSYLRK-----SGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENL 175 (355)
T ss_pred cCCe--------------EEEEEeccCCccHHHHHHh-----cCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHe
Confidence 7664 4999999999999999987 35799999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|+|.+ |.+||+|||+|+...... -+.+|||.|+|||+++. ..|+.++|+|||||++
T Consensus 176 LlD~~-------G~iKitDFGFAK~v~~rT-------------~TlCGTPeYLAPEii~s----k~ynkavDWWalGVLI 231 (355)
T KOG0616|consen 176 LLDQN-------GHIKITDFGFAKRVSGRT-------------WTLCGTPEYLAPEIIQS----KGYNKAVDWWALGVLI 231 (355)
T ss_pred eeccC-------CcEEEEeccceEEecCcE-------------EEecCCccccChHHhhc----CCCCcchhHHHHHHHH
Confidence 99998 999999999998765431 14579999999999987 6789999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|||+.|.+||.+.++.+++++|..+...- +. ..+.++++|+..+|+.|-.+|
T Consensus 232 YEMlaG~pPF~~~~~~~iY~KI~~~~v~f-P~---------------------------~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 232 YEMLAGYPPFYDDNPIQIYEKILEGKVKF-PS---------------------------YFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred HHHHcCCCCCcCCChHHHHHHHHhCcccC-Cc---------------------------ccCHHHHHHHHHHHhhhhHhh
Confidence 99999999999999999999997765421 11 345569999999999999999
Q ss_pred -----CCHHHHHHHHHhhcCCC
Q 001143 1120 -----PTAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1120 -----PSa~ElL~~L~~~~~s~ 1136 (1141)
....+|.+|+||+...+
T Consensus 284 ~gnlknG~~dIk~H~wF~~v~W 305 (355)
T KOG0616|consen 284 FGNLKNGVEDIKNHPWFKGVDW 305 (355)
T ss_pred hcCcCCCccccccCcccccccH
Confidence 46789999999986543
No 18
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=4.5e-40 Score=356.02 Aligned_cols=293 Identities=24% Similarity=0.306 Sum_probs=226.3
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
..+++.|+...+|++|+||.||+|+++.+...|++++++... +...|....++||.+|.+++|||||.+-.++...
T Consensus 72 Crsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmek----ek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~ 147 (419)
T KOG0663|consen 72 CRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEK----EKEGFPITSLREINILLKARHPNIVEVKEVVVGS 147 (419)
T ss_pred cccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeeccccc----ccCCCcchhHHHHHHHHhcCCCCeeeeEEEEecc
Confidence 567888999999999999999999998777777766665432 3344555668999999999999999999998764
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ....|||||||+ .+|.+++... ..+|...+++.++.|+++|++|||.+.|+|||||++|+|+
T Consensus 148 ~------------~d~iy~VMe~~E-hDLksl~d~m----~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm 210 (419)
T KOG0663|consen 148 N------------MDKIYIVMEYVE-HDLKSLMETM----KQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLL 210 (419)
T ss_pred c------------cceeeeeHHHHH-hhHHHHHHhc----cCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheee
Confidence 3 225699999998 8999999873 2479999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.. |.+||+|||+|+.+..+... ....+-|.+|+|||.+.+ ...|++++|+||+|||+.|
T Consensus 211 ~~~-------G~lKiaDFGLAR~ygsp~k~----------~T~lVVTLWYRaPELLLG---~~tyst~iDMWSvGCI~aE 270 (419)
T KOG0663|consen 211 SHK-------GILKIADFGLAREYGSPLKP----------YTPLVVTLWYRAPELLLG---AKTYSTAVDMWSVGCIFAE 270 (419)
T ss_pred ccC-------CcEEecccchhhhhcCCccc----------CcceEEEeeecCHHHhcC---CcccCcchhhhhHHHHHHH
Confidence 988 89999999999988764322 234567999999999998 4679999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCcccc---cc-ccCCCCCCchhh-hhhHHHHHHHHHHhcccC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHE---VA-QSGSGFEKPEAE-LETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~---~~-~~~~~~~~~~~~-~~~~~~L~dLI~~cL~~D 1115 (1141)
|+++++.|.+.+..+..+.|.. ...|. ...++......... +. .....+. ..+. ...++.-.+|++.+|.+|
T Consensus 271 ~l~~kPlf~G~sE~dQl~~If~llGtPt-e~iwpg~~~lp~~k~~~f~~~pyn~lr-~kF~~~~lse~g~~Lln~llt~d 348 (419)
T KOG0663|consen 271 LLTQKPLFPGKSEIDQLDKIFKLLGTPS-EAIWPGYSELPAVKKMTFSEHPYNNLR-KKFGALSLSEQGFDLLNKLLTYD 348 (419)
T ss_pred HHhcCCCCCCCchHHHHHHHHHHhCCCc-cccCCCccccchhhccccCCCCchhhh-hhccccccchhHHHHHHHHhccC
Confidence 9999999999988887777733 22222 11122111111000 00 0000000 0000 124577899999999999
Q ss_pred CCCCCCHHHHHHHHHhhcCCCC
Q 001143 1116 PTERPTAGDLYEMFVARTSSSI 1137 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~~~s~~ 1137 (1141)
|.+|.||.|.|+|-||...+..
T Consensus 349 P~kR~tA~~~L~h~~F~e~P~p 370 (419)
T KOG0663|consen 349 PGKRITAEDGLKHEYFRETPLP 370 (419)
T ss_pred ccccccHHHhhcccccccCCCC
Confidence 9999999999999999875433
No 19
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=5.2e-40 Score=373.22 Aligned_cols=255 Identities=27% Similarity=0.396 Sum_probs=219.7
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
++|.+.+.||+|+||.||+|+.+.+...|+++.+.+......+.+++ .+|++|++.++|||||.++++|+...+
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l----~~ev~i~r~lkHpniv~m~esfEt~~~-- 75 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNL----RQEVRILRSLKHPNIVEMLESFETSAH-- 75 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHH----HHHHHHHHhcCCcchhhHHHhhcccce--
Confidence 67999999999999999999987666666666677777777777777 899999999999999999999998764
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
+++|+||+.| +|..++.. ++.++++.++.|+.|++.||.|||+++|+|||+||.|||++..
T Consensus 76 ------------~~vVte~a~g-~L~~il~~-----d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~- 136 (808)
T KOG0597|consen 76 ------------LWVVTEYAVG-DLFTILEQ-----DGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKG- 136 (808)
T ss_pred ------------EEEEehhhhh-hHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCC-
Confidence 4999999985 99999987 5679999999999999999999999999999999999999987
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+++|+||||+|+.+.... .......|||.|||||...+ ..|+..+|+||+||++|||++|
T Consensus 137 ------~~~KlcdFg~Ar~m~~~t----------~vltsikGtPlYmAPElv~e----~pyd~~sDlWslGcilYE~~~G 196 (808)
T KOG0597|consen 137 ------GTLKLCDFGLARAMSTNT----------SVLTSIKGTPLYMAPELVEE----QPYDHTSDLWSLGCILYELYVG 196 (808)
T ss_pred ------CceeechhhhhhhcccCc----------eeeeeccCcccccCHHHHcC----CCccchhhHHHHHHHHHHHhcC
Confidence 899999999998765422 12335679999999999987 7899999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
++||...+..++.+.|......... ..+..+..|++.+|..||.+|.|..++
T Consensus 197 ~PPF~a~si~~Lv~~I~~d~v~~p~----------------------------~~S~~f~nfl~gLL~kdP~~RltW~~L 248 (808)
T KOG0597|consen 197 QPPFYARSITQLVKSILKDPVKPPS----------------------------TASSSFVNFLQGLLIKDPAQRLTWTDL 248 (808)
T ss_pred CCCchHHHHHHHHHHHhcCCCCCcc----------------------------cccHHHHHHHHHHhhcChhhcccHHHH
Confidence 9999987777777777554332111 456679999999999999999999999
Q ss_pred HHHHHhhc
Q 001143 1126 YEMFVART 1133 (1141)
Q Consensus 1126 L~~L~~~~ 1133 (1141)
+.|+|-+.
T Consensus 249 l~HpF~k~ 256 (808)
T KOG0597|consen 249 LGHPFWKG 256 (808)
T ss_pred hcChHHhh
Confidence 99987654
No 20
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-40 Score=366.82 Aligned_cols=263 Identities=32% Similarity=0.449 Sum_probs=205.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|...+.||+|+||+||++.+. +...|||...+. .....+.+ .+|+.+|.+++|||||+++|......
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~----~~~~~~~l----~~Ei~iL~~l~~p~IV~~~G~~~~~~ 87 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELE----DSPTSESL----EREIRILSRLNHPNIVQYYGSSSSRE 87 (313)
T ss_pred cchhhhhccccCccceEEEEEEecCCCcceeeeeeecc----cchhHHHH----HHHHHHHHhCCCCCEEeeCCcccccc
Confidence 556899999999999999999986 477888875544 11113333 79999999999999999999744322
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. ..++++|||+++|+|.+++.+ .+. .+++..++++++||+.||.|||++|||||||||+|||++
T Consensus 88 ~------------~~~~i~mEy~~~GsL~~~~~~---~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~ 151 (313)
T KOG0198|consen 88 N------------DEYNIFMEYAPGGSLSDLIKR---YGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLD 151 (313)
T ss_pred C------------eeeEeeeeccCCCcHHHHHHH---cCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEe
Confidence 1 245999999999999999987 333 699999999999999999999999999999999999999
Q ss_pred c-ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 963 L-ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 963 ~-~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
. + +.+||+|||+++........ ........||+.|||||++.. +.....++|||||||++.|
T Consensus 152 ~~~-------~~~KlaDFG~a~~~~~~~~~-------~~~~~~~~Gtp~~maPEvi~~---g~~~~~~sDiWSlGCtVvE 214 (313)
T KOG0198|consen 152 PSN-------GDVKLADFGLAKKLESKGTK-------SDSELSVQGTPNYMAPEVIRN---GEVARRESDIWSLGCTVVE 214 (313)
T ss_pred CCC-------CeEEeccCcccccccccccc-------ccccccccCCccccCchhhcC---CCcCCccchhhhcCCEEEe
Confidence 8 5 78999999999766531100 112234679999999999984 1223369999999999999
Q ss_pred HHhCCCCCCCC-CHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1042 LLTLQVPYMGL-SELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1042 LLTGk~Pf~~~-~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+||+.||... ...+....+ .....|.++ ...+.++++|+.+|+..||++|
T Consensus 215 M~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip---------------------------~~ls~~a~~Fl~~C~~~~p~~R 267 (313)
T KOG0198|consen 215 MLTGKPPWSEFFEEAEALLLIGREDSLPEIP---------------------------DSLSDEAKDFLRKCFKRDPEKR 267 (313)
T ss_pred ccCCCCcchhhcchHHHHHHHhccCCCCCCC---------------------------cccCHHHHHHHHHHhhcCcccC
Confidence 99999999862 222222222 222222222 2566789999999999999999
Q ss_pred CCHHHHHHHHHhhcCC
Q 001143 1120 PTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~s 1135 (1141)
|||+++|+|+|.....
T Consensus 268 pta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 268 PTAEELLEHPFLKQNS 283 (313)
T ss_pred cCHHHHhhChhhhccc
Confidence 9999999999997654
No 21
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-39 Score=371.36 Aligned_cols=263 Identities=23% Similarity=0.274 Sum_probs=214.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 879 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~ 879 (1141)
.....|.+.+.||+|+||.|++|.+ .+..||+|+...+...... ......+.+|+.+++.++ ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~---~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~ 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS---QKLDELIKREISILRRLRSHPNIIRLLEVFA 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc---cccchhhHHHHHHHHHhccCCCEeEEEEEEe
Confidence 4466899999999999999999987 4678888875433111111 122233468999999998 999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.... .++||||+.||+|.++|.+ .+++.+.+++++++||++|++|+|++||+||||||+||
T Consensus 91 t~~~--------------~~ivmEy~~gGdL~~~i~~-----~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENi 151 (370)
T KOG0583|consen 91 TPTK--------------IYIVMEYCSGGDLFDYIVN-----KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENI 151 (370)
T ss_pred cCCe--------------EEEEEEecCCccHHHHHHH-----cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHE
Confidence 7653 4999999999999999986 45799999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+. +++||+|||++..... ........+||+.|+|||++.+.. ...+.++||||+||+|
T Consensus 152 lld~~~------~~~Kl~DFG~s~~~~~----------~~~~l~t~cGsp~Y~aPEvl~~~~--~Y~g~~aDvWS~GViL 213 (370)
T KOG0583|consen 152 LLDGNE------GNLKLSDFGLSAISPG----------EDGLLKTFCGSPAYAAPEVLSGKG--TYSGKAADVWSLGVIL 213 (370)
T ss_pred EecCCC------CCEEEeccccccccCC----------CCCcccCCCCCcccCCHHHhCCCC--CcCCchhhhhhhHHHH
Confidence 998762 6899999999976531 111334668999999999998722 1336899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhh-HHHHHHHHHHhcccCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET-LSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~dLI~~cL~~DP~~ 1118 (1141)
|.|++|..||...+...++..|..+...-.. .. +.++++|+.+||..||.+
T Consensus 214 y~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~----------------------------~~~S~~~~~Li~~mL~~~P~~ 265 (370)
T KOG0583|consen 214 YVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS----------------------------YLLSPEARSLIEKMLVPDPST 265 (370)
T ss_pred HHHHhCCCCCCCccHHHHHHHHhcCCccCCC----------------------------CcCCHHHHHHHHHHcCCCccc
Confidence 9999999999987777777776655432111 22 667999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001143 1119 RPTAGDLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~ 1133 (1141)
|+|+.+|++|+|++.
T Consensus 266 R~t~~~i~~h~w~~~ 280 (370)
T KOG0583|consen 266 RITLLEILEHPWFQK 280 (370)
T ss_pred CCCHHHHhhChhhcc
Confidence 999999999999997
No 22
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-39 Score=373.27 Aligned_cols=253 Identities=28% Similarity=0.437 Sum_probs=214.2
Q ss_pred CceEeeeecccCceEEEEEEECCc-cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGSA-DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~~-~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
.+++.+.||+|-||.||.|.|++. .||+|..+.. . ...+.| .+|+++|++|+|+|||++++++..+..+
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--~---m~~~~f----~~Ea~iMk~L~H~~lV~l~gV~~~~~pi- 276 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--S---MSPEAF----LREAQIMKKLRHEKLVKLYGVCTKQEPI- 276 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc--c---cChhHH----HHHHHHHHhCcccCeEEEEEEEecCCce-
Confidence 368999999999999999999776 8999986533 1 122334 7999999999999999999999875533
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
||||||++.|+|.++++. .....+...+.+.++.||+.|++||+++++|||||-+.||||+++
T Consensus 277 -------------yIVtE~m~~GsLl~yLr~---~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~- 339 (468)
T KOG0197|consen 277 -------------YIVTEYMPKGSLLDYLRT---REGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDED- 339 (468)
T ss_pred -------------EEEEEecccCcHHHHhhh---cCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccC-
Confidence 999999999999999986 445679999999999999999999999999999999999999998
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT- 1044 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT- 1044 (1141)
..+||+|||+|+...+..... . ...--...|.|||.+.. ..++.|+|||||||+||||+|
T Consensus 340 ------~~vKIsDFGLAr~~~d~~Y~~---~------~~~kfPIkWtAPEa~~~----~~FS~kSDVWSFGVlL~E~fT~ 400 (468)
T KOG0197|consen 340 ------LVVKISDFGLARLIGDDEYTA---S------EGGKFPIKWTAPEALNY----GKFSSKSDVWSFGVLLWELFTY 400 (468)
T ss_pred ------ceEEEcccccccccCCCceee---c------CCCCCCceecCHHHHhh----CCcccccceeehhhhHHHHhcc
Confidence 799999999999554432221 1 11123567999999987 679999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||.+.+..++...+..|.+.+-+. .+++.+.+++..||+.+|++|||++.
T Consensus 401 G~~py~~msn~ev~~~le~GyRlp~P~---------------------------~CP~~vY~lM~~CW~~~P~~RPtF~~ 453 (468)
T KOG0197|consen 401 GRVPYPGMSNEEVLELLERGYRLPRPE---------------------------GCPDEVYELMKSCWHEDPEDRPTFET 453 (468)
T ss_pred CCCCCCCCCHHHHHHHHhccCcCCCCC---------------------------CCCHHHHHHHHHHhhCCcccCCCHHH
Confidence 999999999999999998888754332 68889999999999999999999998
Q ss_pred HHHHHHhh
Q 001143 1125 LYEMFVAR 1132 (1141)
Q Consensus 1125 lL~~L~~~ 1132 (1141)
+...+...
T Consensus 454 L~~~l~~~ 461 (468)
T KOG0197|consen 454 LREVLEDF 461 (468)
T ss_pred HHHHHHHh
Confidence 77665443
No 23
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.9e-39 Score=376.00 Aligned_cols=260 Identities=21% Similarity=0.291 Sum_probs=220.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
.++..|++++.||.|+.|.|-+|++ +|+.+||||....... ... ..+.+.+|+.+|+-+.||||+++|++++.
T Consensus 9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~-s~s----~~~~IerEIviMkLi~HpnVl~LydVwe~ 83 (786)
T KOG0588|consen 9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL-SSS----QPAGIEREIVIMKLIEHPNVLRLYDVWEN 83 (786)
T ss_pred ccccceeccccccCCCCceehhhhcccccceeEEEeecccccc-ccc----cccchhhhhHHHHHhcCCCeeeeeeeecc
Confidence 4567789999999999999999998 6788999986544211 111 12344799999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
..+ +|+|.||++||.|++++.. .+++++.++.++++||+.|+.|+|..+|+||||||+|+|
T Consensus 84 ~~~--------------lylvlEyv~gGELFdylv~-----kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlL 144 (786)
T KOG0588|consen 84 KQH--------------LYLVLEYVPGGELFDYLVR-----KGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLL 144 (786)
T ss_pred Cce--------------EEEEEEecCCchhHHHHHh-----hCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhh
Confidence 664 5999999999999999986 467999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
+|.. +++||+|||+|..-... ....+.+|+|.|.|||++.|. .+.+.++||||.|||||
T Consensus 145 Ld~~-------~nIKIADFGMAsLe~~g-----------klLeTSCGSPHYA~PEIV~G~---pYdG~~sDVWSCGVILf 203 (786)
T KOG0588|consen 145 LDVK-------NNIKIADFGMASLEVPG-----------KLLETSCGSPHYAAPEIVSGR---PYDGRPSDVWSCGVILF 203 (786)
T ss_pred hhcc-------cCEeeeccceeecccCC-----------ccccccCCCcccCCchhhcCC---CCCCCccccchhHHHHH
Confidence 9988 67999999999653221 123356799999999999983 44579999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
.|+||+.||.+++...++.+++.|...-. ..++.++++||.+||..||++|.
T Consensus 204 ALLtG~LPFdDdNir~LLlKV~~G~f~MP----------------------------s~Is~eaQdLLr~ml~VDp~~Ri 255 (786)
T KOG0588|consen 204 ALLTGKLPFDDDNIRVLLLKVQRGVFEMP----------------------------SNISSEAQDLLRRMLDVDPSTRI 255 (786)
T ss_pred HHHhCCCCCCCccHHHHHHHHHcCcccCC----------------------------CcCCHHHHHHHHHHhccCccccc
Confidence 99999999999888888888888765211 16777899999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001143 1121 TAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~s 1135 (1141)
|++||++|+|...-.
T Consensus 256 T~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 256 TTEEILKHPFLSGYT 270 (786)
T ss_pred cHHHHhhCchhhcCC
Confidence 999999999987543
No 24
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=4.5e-39 Score=367.65 Aligned_cols=270 Identities=23% Similarity=0.350 Sum_probs=214.5
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCC-ChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGS-SADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
.+++|++.++||+|+||.||+|+.+ +..+|+|+. ++... ...+.+. ++.|-.+|....+|+||++|..|.+
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~L--kKS~M~~~~Qv~h----V~aERdiL~~~ds~~vVKLyYsFQD 212 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKIL--KKSEMLKKNQVEH----VRAERDILAEVDSPWVVKLYYSFQD 212 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecc--cHHHHHhhhhHHH----HHHHHHHhhhcCCCcEEEEEEEecC
Confidence 5789999999999999999999864 556677764 33221 1223333 3789999999999999999999998
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
..++ ||||||++||++..+|.+ ...|++..++.++.+++.|++.||+.|+|||||||+|+|
T Consensus 213 ~~~L--------------YLiMEylPGGD~mTLL~~-----~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlL 273 (550)
T KOG0605|consen 213 KEYL--------------YLIMEYLPGGDMMTLLMR-----KDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLL 273 (550)
T ss_pred CCee--------------EEEEEecCCccHHHHHHh-----cCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhhee
Confidence 7755 999999999999999987 457999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccc------------c-ccCCCC------------------------CCC
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCC------------I-AHRGIP------------------------APD 1003 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~------------~-~~~~~~------------------------~~~ 1003 (1141)
||.. |++||+|||+|..+........ . .....+ ..-
T Consensus 274 iD~~-------GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~ 346 (550)
T KOG0605|consen 274 IDAK-------GHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAY 346 (550)
T ss_pred ecCC-------CCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhh
Confidence 9998 9999999999965432111000 0 000000 011
Q ss_pred CccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccc
Q 001143 1004 VCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEH 1082 (1141)
Q Consensus 1004 ~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~ 1082 (1141)
..+|||.|||||++.+ ..|+..+|+||||||+||||.|.+||.+.++.+.+..|..... ...+.
T Consensus 347 StVGTPDYiAPEVll~----kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~----------- 411 (550)
T KOG0605|consen 347 STVGTPDYIAPEVLLG----KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE----------- 411 (550)
T ss_pred cccCCccccchHHHhc----CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC-----------
Confidence 3589999999999998 6689999999999999999999999999999999888743221 11110
Q ss_pred cccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC---CHHHHHHHHHhhcCC
Q 001143 1083 EVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP---TAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1083 ~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP---Sa~ElL~~L~~~~~s 1135 (1141)
+...++++++||.+||. ||++|. .++||-+|+||+.-.
T Consensus 412 --------------~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~ 452 (550)
T KOG0605|consen 412 --------------EVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD 452 (550)
T ss_pred --------------cCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence 01455789999999999 999996 599999999998653
No 25
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-39 Score=361.66 Aligned_cols=278 Identities=24% Similarity=0.252 Sum_probs=215.2
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCC-----hHHHH-HhHHhHHHHHHHHhhCCCCCcc
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSS-----ADEIR-NFEYSCLGEVRMLGALRHSCIV 872 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~-----~~~~~-~~~~~~~~Ei~iL~~L~HpNIV 872 (1141)
+-..+++|++.+.||+|.||.|-+|++ .+..+|+||+..+..... ..... .-.+++.+||.+|++++|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 456789999999999999999999998 467788888432211110 01111 0012458999999999999999
Q ss_pred ceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCccc
Q 001143 873 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKH-VSVKLALFIAQDVAAALVELHSKHIMH 951 (1141)
Q Consensus 873 kllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~-Ls~~~i~~Ia~QIa~gL~yLHs~gIvH 951 (1141)
+++++..+.. ...+|||+|||..|.+..+= ...+ +++.++++|+++++.||+|||.+||||
T Consensus 172 ~LiEvLDDP~------------s~~~YlVley~s~G~v~w~p------~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiH 233 (576)
T KOG0585|consen 172 KLIEVLDDPE------------SDKLYLVLEYCSKGEVKWCP------PDKPELSEQQARKYLRDVVLGLEYLHYQGIIH 233 (576)
T ss_pred EEEEeecCcc------------cCceEEEEEeccCCccccCC------CCcccccHHHHHHHHHHHHHHHHHHHhcCeec
Confidence 9999987643 23679999999988865432 2334 999999999999999999999999999
Q ss_pred cCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhh
Q 001143 952 RDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVD 1031 (1141)
Q Consensus 952 rDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksD 1031 (1141)
|||||+|+|++.+ ++|||+|||.+........... .......+|||.|+|||.+.+.......+.+.|
T Consensus 234 RDIKPsNLLl~~~-------g~VKIsDFGVs~~~~~~~~~~~-----d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~D 301 (576)
T KOG0585|consen 234 RDIKPSNLLLSSD-------GTVKISDFGVSNEFPQGSDEGS-----DDQLSRTVGTPAFFAPELCSGGNSFSYSGFALD 301 (576)
T ss_pred cccchhheEEcCC-------CcEEeeccceeeecccCCcccc-----HHHHhhcCCCccccchHhhcCCCCccccchhhh
Confidence 9999999999988 8999999999875422211000 001123579999999999987544455689999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001143 1032 IWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1111 (1141)
Q Consensus 1032 VWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~c 1111 (1141)
|||+||+||.|+.|+.||.+....+++++|....... + +. .+...++++||.+|
T Consensus 302 iWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~f-P------------------------~~-pe~~e~~kDli~~l 355 (576)
T KOG0585|consen 302 IWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEF-P------------------------EN-PEINEDLKDLIKRL 355 (576)
T ss_pred hhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccC-C------------------------Cc-ccccHHHHHHHHHH
Confidence 9999999999999999999988888998886543211 1 00 14566799999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhcC
Q 001143 1112 TEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1112 L~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
|++||.+|.+..+|..|+|....
T Consensus 356 L~KdP~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 356 LEKDPEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred hhcChhheeehhhheecceeccC
Confidence 99999999999999999998654
No 26
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-39 Score=355.13 Aligned_cols=283 Identities=21% Similarity=0.266 Sum_probs=213.3
Q ss_pred CceEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|+-.+++|.|+||.||+|..... .+|+|- .-.. ...+ .+|+.+|+.+.|||||++.-+|......
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKK--v~~d----~r~k------nrEl~im~~l~HpNIV~L~~~f~~~~~~ 92 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKK--VLQD----KRYK------NRELQIMRKLDHPNIVRLLYFFSSSTES 92 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEE--ecCC----CCcC------cHHHHHHHhcCCcCeeeEEEEEEecCCC
Confidence 478899999999999999998544 455553 2211 1112 4799999999999999999988764310
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
......+||||+| .+|.+.++..... ...++.-.++-+++||.+||.|||+.||+||||||.|+|+|.+
T Consensus 93 ---------d~~~lnlVleymP-~tL~~~~r~~~~~-~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~ 161 (364)
T KOG0658|consen 93 ---------DEVYLNLVLEYMP-ETLYRVIRHYTRA-NQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPD 161 (364)
T ss_pred ---------chhHHHHHHHhch-HHHHHHHHHHhhc-CCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCC
Confidence 1235679999998 8999999864333 4578999999999999999999999999999999999999987
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
. +.+||||||.|+.+...... .....|..|+|||.+.+ ...|+.++||||.||++.||+-
T Consensus 162 t------g~LKicDFGSAK~L~~~epn-----------iSYicSRyYRaPELifg---a~~Yt~~IDiWSaGCV~aELl~ 221 (364)
T KOG0658|consen 162 T------GVLKICDFGSAKVLVKGEPN-----------ISYICSRYYRAPELIFG---ATEYTTSIDIWSAGCVMAELLK 221 (364)
T ss_pred C------CeEEeccCCcceeeccCCCc-----------eeEEEeccccCHHHHcC---ccccCceeEEhhhhHHHHHHhc
Confidence 5 89999999999887543211 24567999999999998 4679999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhc-cCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1045 LQVPYMGLSELEIHDLI-QMGKRPRLTDELEALG-SCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
|++.|.+.+..+....| ...+.|...+ +.... ......+.+.....-..-.....++++.+|+.++|+++|.+|.++
T Consensus 222 g~plFpG~s~~dQL~eIik~lG~Pt~e~-I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~ 300 (364)
T KOG0658|consen 222 GQPLFPGDSSVDQLVEIIKVLGTPTRED-IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSA 300 (364)
T ss_pred CCcccCCCCHHHHHHHHHHHhCCCCHHH-HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCH
Confidence 99999998877666555 4444444332 22221 111111111111110001222567789999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
.|++.|++|..
T Consensus 301 ~~~l~h~fFde 311 (364)
T KOG0658|consen 301 LEALAHPFFDE 311 (364)
T ss_pred HHHhcchhhHH
Confidence 99999999964
No 27
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-40 Score=343.38 Aligned_cols=262 Identities=26% Similarity=0.331 Sum_probs=216.7
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+.|++.++||+|+|+.||++.+ .+..+++|+...++.... ..+.+ .+|++|++.|+|||||++.+.+.+..+
T Consensus 11 d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~--~~e~l----~rEarIC~~LqHP~IvrL~~ti~~~~~ 84 (355)
T KOG0033|consen 11 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR--DFQKL----EREARICRKLQHPNIVRLHDSIQEESF 84 (355)
T ss_pred hhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc--cHHHH----HHHHHHHHhcCCCcEeehhhhhcccce
Confidence 4689999999999999999877 467788888665544332 33444 799999999999999999998876654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. |+|+|++.|++|..-|-.. ..+++..+-.+++||+.||.|+|.+||||||+||+|+++-.
T Consensus 85 ~--------------ylvFe~m~G~dl~~eIV~R-----~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLAS 145 (355)
T KOG0033|consen 85 H--------------YLVFDLVTGGELFEDIVAR-----EFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLAS 145 (355)
T ss_pred e--------------EEEEecccchHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeee
Confidence 3 9999999999997666541 36899999999999999999999999999999999999965
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
.. ...-+||+|||+|..+.... .....+|||.|||||++.. .+|+..+|||+.||+||-|+
T Consensus 146 K~----~~A~vKL~~FGvAi~l~~g~-----------~~~G~~GtP~fmaPEvvrk----dpy~kpvDiW~cGViLfiLL 206 (355)
T KOG0033|consen 146 KA----KGAAVKLADFGLAIEVNDGE-----------AWHGFAGTPGYLSPEVLKK----DPYSKPVDIWACGVILYILL 206 (355)
T ss_pred cc----CCCceeecccceEEEeCCcc-----------ccccccCCCcccCHHHhhc----CCCCCcchhhhhhHHHHHHH
Confidence 42 22569999999998776321 2235689999999999986 67999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
.|.+||.+.+...+++.|..+...-....+ ..++++.++|+++||..||.+|.|+.
T Consensus 207 ~G~~PF~~~~~~rlye~I~~g~yd~~~~~w------------------------~~is~~Ak~LvrrML~~dP~kRIta~ 262 (355)
T KOG0033|consen 207 VGYPPFWDEDQHRLYEQIKAGAYDYPSPEW------------------------DTVTPEAKSLIRRMLTVNPKKRITAD 262 (355)
T ss_pred hCCCCCCCccHHHHHHHHhccccCCCCccc------------------------CcCCHHHHHHHHHHhccChhhhccHH
Confidence 999999998888899998776643222111 15667899999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 001143 1124 DLYEMFVARTSS 1135 (1141)
Q Consensus 1124 ElL~~L~~~~~s 1135 (1141)
|+|+|+|.....
T Consensus 263 EAL~HpWi~~r~ 274 (355)
T KOG0033|consen 263 EALKHPWICNRE 274 (355)
T ss_pred HHhCCchhcchH
Confidence 999999987543
No 28
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.5e-38 Score=355.51 Aligned_cols=252 Identities=27% Similarity=0.359 Sum_probs=205.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|.+. +..+|+|+....... ..... ..+.+|+.++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~----~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 74 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVI-RLKQE----QHVHNEKRVLKEVSHPFIIRLFWTEHDQR- 74 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hhHHH----HHHHHHHHHHHhCCCCcHhhhHhhhccCC-
Confidence 46899999999999999999985 667888876432110 11112 23478999999999999999998877654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~ 136 (291)
T cd05612 75 -------------FLYMLMEYVPGGELFSYLRN-----SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDK 136 (291)
T ss_pred -------------eEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECC
Confidence 45999999999999999976 346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++...... .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 137 ~-------~~~kl~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~~l~ 192 (291)
T cd05612 137 E-------GHIKLTDFGFAKKLRDR-------------TWTLCGTPEYLAPEVIQS----KGHNKAVDWWALGILIYEML 192 (291)
T ss_pred C-------CCEEEEecCcchhccCC-------------cccccCChhhcCHHHHcC----CCCCchhhHHHHHHHHHHHH
Confidence 7 78999999998754321 112458999999999876 45789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC--
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT-- 1121 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS-- 1121 (1141)
+|+.||.+....+....+..+... ++ ...+..+.+++.+||+.||.+||+
T Consensus 193 ~g~~pf~~~~~~~~~~~i~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~dp~~R~~~~ 244 (291)
T cd05612 193 VGYPPFFDDNPFGIYEKILAGKLE-FP---------------------------RHLDLYAKDLIKKLLVVDRTRRLGNM 244 (291)
T ss_pred hCCCCCCCCCHHHHHHHHHhCCcC-CC---------------------------ccCCHHHHHHHHHHcCCCHHHccCCc
Confidence 999999987777766666443321 11 023456899999999999999995
Q ss_pred ---HHHHHHHHHhhc
Q 001143 1122 ---AGDLYEMFVART 1133 (1141)
Q Consensus 1122 ---a~ElL~~L~~~~ 1133 (1141)
++++++|+|+..
T Consensus 245 ~~~~~~~l~h~~~~~ 259 (291)
T cd05612 245 KNGADDVKNHRWFKS 259 (291)
T ss_pred cCCHHHHhcCccccC
Confidence 999999999964
No 29
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-38 Score=348.90 Aligned_cols=289 Identities=19% Similarity=0.271 Sum_probs=218.1
Q ss_pred ceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
|...+.||+|+||.|+.|.+..+...|+||++..........++ ..+|+.+|+.++|+||+.+++.+..+.
T Consensus 24 y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akR----tlRElklLr~~~HeNIi~l~di~~p~~----- 94 (359)
T KOG0660|consen 24 YVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKR----TLRELKLLRHLRHENIIGLLDIFRPPS----- 94 (359)
T ss_pred ecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHH----HHHHHHHHHHhcCCCcceEEeeccccc-----
Confidence 45579999999999999999666556666555533333333333 379999999999999999999987521
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 967 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~ 967 (1141)
.......|+|+|+|+ .+|...|+. +..++...+..+++||++||.|+|+.+|+||||||+|+|++.+
T Consensus 95 ----~~~f~DvYiV~elMe-tDL~~iik~-----~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~--- 161 (359)
T KOG0660|consen 95 ----RDKFNDVYLVFELME-TDLHQIIKS-----QQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNAD--- 161 (359)
T ss_pred ----ccccceeEEehhHHh-hHHHHHHHc-----CccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccC---
Confidence 123446799999995 899999986 3359999999999999999999999999999999999999988
Q ss_pred CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001143 968 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1047 (1141)
Q Consensus 968 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~ 1047 (1141)
+.+||+|||+|+........ ..-+..+.|.+|+|||++.. ...|+.++||||.|||+.||++|++
T Consensus 162 ----c~lKI~DFGLAR~~~~~~~~--------~~mTeYVaTRWYRAPElll~---~~~Yt~aiDiWSvGCI~AEmL~gkp 226 (359)
T KOG0660|consen 162 ----CDLKICDFGLARYLDKFFED--------GFMTEYVATRWYRAPELLLN---SSEYTKAIDIWSVGCILAEMLTGKP 226 (359)
T ss_pred ----CCEEeccccceeeccccCcc--------cchhcceeeeeecCHHHHhc---cccccchhhhhhhhHHHHHHHcCCC
Confidence 88999999999887542111 11124578999999999876 4679999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCC---CCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1048 PYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSG---FEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1048 Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
.|.+.+..+.+..|......+-+..+............+.... ...........+.+.+|+.+||..||.+|+|++|
T Consensus 227 lFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~e 306 (359)
T KOG0660|consen 227 LFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEE 306 (359)
T ss_pred CCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHH
Confidence 9999887777766644333333333333321111111111111 1111122367788999999999999999999999
Q ss_pred HHHHHHhhc
Q 001143 1125 LYEMFVART 1133 (1141)
Q Consensus 1125 lL~~L~~~~ 1133 (1141)
+++|+++..
T Consensus 307 AL~hPYl~~ 315 (359)
T KOG0660|consen 307 ALAHPYLAP 315 (359)
T ss_pred HhcChhhhh
Confidence 999999874
No 30
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=1e-38 Score=367.73 Aligned_cols=267 Identities=25% Similarity=0.389 Sum_probs=216.2
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...++...+.+.||+|+||+||+|+|.+ +||||+...+ ....+..+.| +.|+..+++-+|.||+-|+|++..+
T Consensus 388 eIp~~ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~--~pt~~qlqaF----KnEVa~lkkTRH~NIlLFMG~~~~p 460 (678)
T KOG0193|consen 388 EIPPEEVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVD--DPTPEQLQAF----KNEVAVLKKTRHENILLFMGACMNP 460 (678)
T ss_pred ccCHHHhhccceeccccccceeeccccc-ceEEEEEecC--CCCHHHHHHH----HHHHHHHhhcchhhheeeehhhcCC
Confidence 3455667899999999999999999976 5788886544 4455566666 8999999999999999999999864
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..||+.+|+|.+|+.+++.. ...|+....+.|++||++|+.|||.++|||||||..|||+
T Consensus 461 ~---------------~AIiTqwCeGsSLY~hlHv~----etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl 521 (678)
T KOG0193|consen 461 P---------------LAIITQWCEGSSLYTHLHVQ----ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL 521 (678)
T ss_pred c---------------eeeeehhccCchhhhhccch----hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE
Confidence 3 28999999999999999862 3469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
.++ +.|||+|||++....... +.......-|...|||||++. +....+|++.+||||||+++||
T Consensus 522 ~~~-------~kVkIgDFGLatvk~~w~--------g~~q~~qp~gsilwmAPEvIR-mqd~nPfS~qSDVYaFGiV~YE 585 (678)
T KOG0193|consen 522 HED-------LKVKIGDFGLATVKTRWS--------GEQQLEQPHGSLLWMAPEVIR-MQDDNPFSFQSDVYAFGIVWYE 585 (678)
T ss_pred ccC-------CcEEEecccceeeeeeec--------cccccCCCccchhhhcHHHHh-hcccCCCCcccchhhhhHHHHH
Confidence 987 789999999996533221 111122334788999999997 4456789999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++|..||.....++++.++-+|.. +.... ....+++++.+|+..||.+++++||
T Consensus 586 Lltg~lPysi~~~dqIifmVGrG~l~pd~s~------------------------~~s~~pk~mk~Ll~~C~~~~~~eRP 641 (678)
T KOG0193|consen 586 LLTGELPYSIQNRDQIIFMVGRGYLMPDLSK------------------------IRSNCPKAMKRLLSDCWKFDREERP 641 (678)
T ss_pred HHhCcCCcCCCChhheEEEecccccCccchh------------------------hhccCHHHHHHHHHHHHhcCcccCc
Confidence 9999999996666666555544422 11110 1127788999999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
.+.+|+..+.....
T Consensus 642 ~F~~il~~l~~l~~ 655 (678)
T KOG0193|consen 642 LFPQLLSKLEELLP 655 (678)
T ss_pred cHHHHHHHHHHhhh
Confidence 99999997776654
No 31
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1e-37 Score=351.00 Aligned_cols=282 Identities=20% Similarity=0.229 Sum_probs=206.4
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+++|++.++||+|+||+||+|++. +..+|+|+.+.... . ... ..+.+|+.++++++||||+++++++..
T Consensus 2 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~-~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~ 74 (288)
T cd07871 2 GKLETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--E-GAP----CTAIREVSLLKNLKHANIVTLHDIIHT 74 (288)
T ss_pred CccccceEeeEEecCCCEEEEEEEECCCCCEEEEEEeccccc--C-Ccc----hhHHHHHHHHHhCCCCCEeeEEEEEcC
Confidence 45778999999999999999999874 56677777543321 1 111 123689999999999999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..++||||++ ++|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 75 ~~--------------~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil 135 (288)
T cd07871 75 ER--------------CLTLVFEYLD-SDLKQYLDNC----GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLL 135 (288)
T ss_pred CC--------------eEEEEEeCCC-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 54 3499999998 5999988651 235889999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||+++....... ......+++.|+|||++.+ ...++.++||||+||++|
T Consensus 136 ~~~~-------~~~kl~DfG~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~~l~ 195 (288)
T cd07871 136 INEK-------GELKLADFGLARAKSVPTK----------TYSNEVVTLWYRPPDVLLG---STEYSTPIDMWGVGCILY 195 (288)
T ss_pred ECCC-------CCEEECcCcceeeccCCCc----------cccCceecccccChHHhcC---CcccCcHHHHHHHHHHHH
Confidence 9887 7899999999865432111 1123457999999999865 245789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCc---cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH---EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|++|+.||.+.+..+....+...........++...... .....+.. ...........+.++.+|+.+||++||.
T Consensus 196 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~dll~~mL~~dp~ 274 (288)
T cd07871 196 EMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYR-AQPLINHAPRLDTDGIDLLSSLLLYETK 274 (288)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccC-CCchHHhCCCCCHHHHHHHHHhcCcCcc
Confidence 9999999998877766665553322222222221110000 00000000 0000011124567789999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 001143 1118 ERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~ 1131 (1141)
+|||++|+++|+||
T Consensus 275 ~R~t~~~~l~hp~f 288 (288)
T cd07871 275 SRISAEAALRHSYF 288 (288)
T ss_pred cCCCHHHHhcCCCC
Confidence 99999999999986
No 32
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-38 Score=372.10 Aligned_cols=258 Identities=27% Similarity=0.342 Sum_probs=215.1
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~ 878 (1141)
...+++|.+.++||+|+||.|++|..+ +..+|+|+.+..... ..++.+.. +.|.+|+..+. ||.++.++..|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il-~~d~Ve~~----~~EkrI~~la~~HPFL~~L~~~f 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDIL-QRDEVESL----MCEKRIFELANRHPFLVNLFSCF 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeecccee-ccccHHHH----HHHHHHHHHhccCCeEeeccccc
Confidence 556889999999999999999999985 456777775433322 23344444 78999998875 99999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.++ +|+||||+.||++..+++ ...+++..++.|+..|+.||+|||++||||||||.+|
T Consensus 439 QT~~~--------------l~fvmey~~Ggdm~~~~~------~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdN 498 (694)
T KOG0694|consen 439 QTKEH--------------LFFVMEYVAGGDLMHHIH------TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDN 498 (694)
T ss_pred ccCCe--------------EEEEEEecCCCcEEEEEe------cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhh
Confidence 98775 499999999999544443 2579999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||+|.+ |++||+|||+|+..-... ....+++|||.|||||++.+ ..|+.++|+|||||+
T Consensus 499 iLLD~e-------Gh~kiADFGlcKe~m~~g----------~~TsTfCGTpey~aPEil~e----~~Yt~aVDWW~lGVL 557 (694)
T KOG0694|consen 499 LLLDTE-------GHVKIADFGLCKEGMGQG----------DRTSTFCGTPEFLAPEVLTE----QSYTRAVDWWGLGVL 557 (694)
T ss_pred eEEccc-------CcEEecccccccccCCCC----------CccccccCChhhcChhhhcc----CcccchhhHHHHHHH
Confidence 999998 999999999997533211 12347789999999999997 789999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
||||+.|+.||.+.++.++++.|........ ...+.+..++++++|..+|++
T Consensus 558 lyeML~Gq~PF~gddEee~FdsI~~d~~~yP----------------------------~~ls~ea~~il~~ll~k~p~k 609 (694)
T KOG0694|consen 558 LYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----------------------------RFLSKEAIAIMRRLLRKNPEK 609 (694)
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHhcCCCCCC----------------------------CcccHHHHHHHHHHhccCccc
Confidence 9999999999999999999999876543211 155678999999999999999
Q ss_pred CCC-----HHHHHHHHHhhc
Q 001143 1119 RPT-----AGDLYEMFVART 1133 (1141)
Q Consensus 1119 RPS-----a~ElL~~L~~~~ 1133 (1141)
|.. +.+|.+|++|+.
T Consensus 610 RLG~~e~d~~~i~~hpFFr~ 629 (694)
T KOG0694|consen 610 RLGSGERDAEDIKKHPFFRS 629 (694)
T ss_pred ccCCCCCCchhhhhCCcccc
Confidence 974 688999999975
No 33
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=7.5e-38 Score=359.47 Aligned_cols=256 Identities=23% Similarity=0.287 Sum_probs=208.2
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+.+|++.+.||+|+||.||+|++. +..+|+|+....... ..... ..+.+|+.++++++||||+++++++.
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~----~~~~~E~~~l~~l~hp~iv~~~~~~~ 88 (329)
T PTZ00263 14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREIL-KMKQV----QHVAQEKSILMELSHPFIVNMMCSFQ 88 (329)
T ss_pred CCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhhH----HHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 345788999999999999999999984 566888876432110 11112 23479999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 89 ~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NI 149 (329)
T PTZ00263 89 DEN--------------RVYFLLEFVVGGELFTHLRK-----AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENL 149 (329)
T ss_pred cCC--------------EEEEEEcCCCCChHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHE
Confidence 655 34999999999999999976 34689999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||++....... ....||+.|+|||++.+ ..++.++|||||||++
T Consensus 150 ll~~~-------~~~kl~Dfg~~~~~~~~~-------------~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 205 (329)
T PTZ00263 150 LLDNK-------GHVKVTDFGFAKKVPDRT-------------FTLCGTPEYLAPEVIQS----KGHGKAVDWWTMGVLL 205 (329)
T ss_pred EECCC-------CCEEEeeccCceEcCCCc-------------ceecCChhhcCHHHHcC----CCCCCcceeechHHHH
Confidence 99887 789999999987543211 12458999999999976 4578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|..||.+....+....+..+..+ ++. ..+..+.+|+.+||+.||.+|
T Consensus 206 ~elltg~~pf~~~~~~~~~~~i~~~~~~-~p~---------------------------~~~~~~~~li~~~L~~dP~~R 257 (329)
T PTZ00263 206 YEFIAGYPPFFDDTPFRIYEKILAGRLK-FPN---------------------------WFDGRARDLVKGLLQTDHTKR 257 (329)
T ss_pred HHHHcCCCCCCCCCHHHHHHHHhcCCcC-CCC---------------------------CCCHHHHHHHHHHhhcCHHHc
Confidence 9999999999887776666666543211 110 234568999999999999999
Q ss_pred CC-----HHHHHHHHHhhc
Q 001143 1120 PT-----AGDLYEMFVART 1133 (1141)
Q Consensus 1120 PS-----a~ElL~~L~~~~ 1133 (1141)
|+ ++++++|+|+..
T Consensus 258 ~~~~~~~~~~ll~hp~f~~ 276 (329)
T PTZ00263 258 LGTLKGGVADVKNHPYFHG 276 (329)
T ss_pred CCCCCCCHHHHhcCCccCC
Confidence 97 799999999865
No 34
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-39 Score=361.80 Aligned_cols=258 Identities=29% Similarity=0.418 Sum_probs=214.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..|+..+.||+|+||.||+|.+. +..||+|+..++. ..++++++ ++|+.++.+++++||.++|+.|.....
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~---~~deIedi----qqei~~Ls~~~~~~it~yygsyl~g~~ 85 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE---AEDEIEDI----QQEISVLSQCDSPNITEYYGSYLKGTK 85 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh---cchhhHHH----HHHHHHHHhcCcchHHhhhhheeeccc
Confidence 34777799999999999999985 5567777765543 23445555 799999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+ +++||||.||++.+.++. ...+++..+..|+++++.||.|||.++.+|||||+.|||+..
T Consensus 86 L--------------wiiMey~~gGsv~~lL~~-----~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~ 146 (467)
T KOG0201|consen 86 L--------------WIIMEYCGGGSVLDLLKS-----GNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSE 146 (467)
T ss_pred H--------------HHHHHHhcCcchhhhhcc-----CCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEec
Confidence 4 999999999999999975 345588999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.+..+..... ....++||+.|||||++.+ ..|+.|+||||||++.+||+
T Consensus 147 ~-------g~vkl~DfgVa~ql~~~~~----------rr~tfvGTPfwMAPEVI~~----~~Y~~KADIWSLGITaiEla 205 (467)
T KOG0201|consen 147 S-------GDVKLADFGVAGQLTNTVK----------RRKTFVGTPFWMAPEVIKQ----SGYDTKADIWSLGITAIELA 205 (467)
T ss_pred c-------CcEEEEecceeeeeechhh----------ccccccccccccchhhhcc----ccccchhhhhhhhHHHHHHh
Confidence 8 8999999999987655322 2257789999999999986 67999999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|.+||....++.+...|.+..+|.+. ...++.+++|+..||..||+.||+|.
T Consensus 206 ~GePP~s~~hPmrvlflIpk~~PP~L~---------------------------~~~S~~~kEFV~~CL~k~P~~RpsA~ 258 (467)
T KOG0201|consen 206 KGEPPHSKLHPMRVLFLIPKSAPPRLD---------------------------GDFSPPFKEFVEACLDKNPEFRPSAK 258 (467)
T ss_pred cCCCCCcccCcceEEEeccCCCCCccc---------------------------cccCHHHHHHHHHHhhcCcccCcCHH
Confidence 999999987775555554444443332 25566799999999999999999999
Q ss_pred HHHHHHHhhcCCCC
Q 001143 1124 DLYEMFVARTSSSI 1137 (1141)
Q Consensus 1124 ElL~~L~~~~~s~~ 1137 (1141)
++++|.|.+...+.
T Consensus 259 ~LLKh~FIk~a~k~ 272 (467)
T KOG0201|consen 259 ELLKHKFIKRAKKT 272 (467)
T ss_pred HHhhhHHHHhcCCc
Confidence 99999998875443
No 35
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.7e-37 Score=346.12 Aligned_cols=281 Identities=24% Similarity=0.260 Sum_probs=201.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|++. +..+|+|+..... ...... ..+.+|+.++++++||||+++++++...+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 73 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSE--ENEEVK----ETTLRELKMLRTLKQENIVELKEAFRRRG- 73 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccc--ccccch----hhHHHHHHHHHhCCCccccchhhhEecCC-
Confidence 36999999999999999999985 4567777654321 111112 23478999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||++++.+..+... ...+++..++.++.||+.||.|||+.||+||||||+||+++.
T Consensus 74 -------------~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~ 135 (287)
T cd07848 74 -------------KLYLVFEYVEKNMLELLEEM-----PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISH 135 (287)
T ss_pred -------------EEEEEEecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence 34999999997766554432 246899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++......... ......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 136 ~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~DiwslGvil~el~ 195 (287)
T cd07848 136 N-------DVLKLCDFGFARNLSEGSNA---------NYTEYVATRWYRSPELLLG----APYGKAVDMWSVGCILGELS 195 (287)
T ss_pred C-------CcEEEeeccCcccccccccc---------cccccccccccCCcHHHcC----CCCCCchhHHhHHHHHHHHH
Confidence 7 78999999999765332111 1123468999999999876 45789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCc---cccccccCCCCC-CchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH---EHEVAQSGSGFE-KPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~---~~~~~~~~~~~~-~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|+.||.+.+..+....+.....+............. ............ ........+.++.+|+.+||++||++|
T Consensus 196 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R 275 (287)
T cd07848 196 DGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDR 275 (287)
T ss_pred hCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccC
Confidence 9999998776655444443322221111111000000 000000000000 000011356789999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001143 1120 PTAGDLYEMFVA 1131 (1141)
Q Consensus 1120 PSa~ElL~~L~~ 1131 (1141)
||++|+++|+||
T Consensus 276 ~s~~~~l~hp~f 287 (287)
T cd07848 276 YLTEQCLNHPAF 287 (287)
T ss_pred CCHHHHhcCCCC
Confidence 999999999986
No 36
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=6.4e-37 Score=351.17 Aligned_cols=292 Identities=20% Similarity=0.231 Sum_probs=205.1
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.++||+|+||.||+|.+. +..+|+|..... ........ ++.+|+.++++++||||+++++++......
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 74 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDV--FEHVSDAT----RILREIKLLRLLRHPDIVEIKHIMLPPSRR 74 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechh--hccchhHH----HHHHHHHHHHhCCCCCEeeecceEeccCCC
Confidence 5899999999999999999974 566777764321 11112222 347999999999999999999988643211
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.....|+||||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 75 ---------~~~~~~lv~e~~~-~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~ 139 (338)
T cd07859 75 ---------EFKDIYVVFELME-SDLHQVIKA-----NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANAD 139 (338)
T ss_pred ---------CCceEEEEEecCC-CCHHHHHHh-----cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC
Confidence 1235699999995 799998875 3468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||+++........ ........||+.|+|||++.+. ...++.++|||||||++|+|++
T Consensus 140 -------~~~kL~Dfg~~~~~~~~~~~-------~~~~~~~~~t~~y~aPE~~~~~--~~~~~~~~DvwSlGvvl~el~t 203 (338)
T cd07859 140 -------CKLKICDFGLARVAFNDTPT-------AIFWTDYVATRWYRAPELCGSF--FSKYTPAIDIWSIGCIFAEVLT 203 (338)
T ss_pred -------CcEEEccCccccccccccCc-------cccccCCCCCCCcCCHHHHhcc--ccccCchhHHHHHHHHHHHHHc
Confidence 78999999999754321111 0111234689999999998642 1457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccc-ccc--ccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEH-EVA--QSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|+.||.+.+.......+..................... ... ...............+..+.+++.+||+.||++|||
T Consensus 204 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 283 (338)
T cd07859 204 GKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPT 283 (338)
T ss_pred CCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCC
Confidence 99999876655444433221111111111111000000 000 000000000011134567899999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001143 1122 AGDLYEMFVARTSS 1135 (1141)
Q Consensus 1122 a~ElL~~L~~~~~s 1135 (1141)
++|+++|+|+....
T Consensus 284 ~~e~l~hp~f~~~~ 297 (338)
T cd07859 284 AEEALADPYFKGLA 297 (338)
T ss_pred HHHHhcCchhhhcC
Confidence 99999999997543
No 37
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-38 Score=333.61 Aligned_cols=267 Identities=24% Similarity=0.349 Sum_probs=220.5
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~ 881 (1141)
+..|.-.+.||.|..++|-++.+ ++...|+|+.....+....+...++.+...+|+.||+++ .||+|+++.++|+.+
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~ 95 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESD 95 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCc
Confidence 56688889999999999998876 466778887554433333333555555668999999999 599999999999987
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.++ ++|+|.|+.|.|.+++.. ...++++..++|++|+..|+.|||.++||||||||+|||+
T Consensus 96 sF~--------------FlVFdl~prGELFDyLts-----~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl 156 (411)
T KOG0599|consen 96 AFV--------------FLVFDLMPRGELFDYLTS-----KVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL 156 (411)
T ss_pred chh--------------hhhhhhcccchHHHHhhh-----heeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee
Confidence 765 999999999999999976 4579999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc--CCCCCCchhhHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH--KPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~~s~ksDVWSLGviL 1039 (1141)
+++ .++||+|||+|..+..... ....+|||+|.|||.+.... ....|+..+|+||+||++
T Consensus 157 ddn-------~~i~isDFGFa~~l~~Gek-----------LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVIm 218 (411)
T KOG0599|consen 157 DDN-------MNIKISDFGFACQLEPGEK-----------LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIM 218 (411)
T ss_pred ccc-------cceEEeccceeeccCCchh-----------HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHH
Confidence 988 8899999999987765322 22457999999999987643 235688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|.|+.|.+||......-+...|..|...--. |++. +.+....+||.+||+.||.+|
T Consensus 219 yTLLaGcpPFwHRkQmlMLR~ImeGkyqF~s-----------------------peWa-dis~~~KdLIsrlLqVdp~~R 274 (411)
T KOG0599|consen 219 YTLLAGCPPFWHRKQMLMLRMIMEGKYQFRS-----------------------PEWA-DISATVKDLISRLLQVDPTKR 274 (411)
T ss_pred HHHHcCCCchhHHHHHHHHHHHHhcccccCC-----------------------cchh-hccccHHHHHHHHHeeCchhc
Confidence 9999999999866566667777776653221 1111 667789999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 001143 1120 PTAGDLYEMFVAR 1132 (1141)
Q Consensus 1120 PSa~ElL~~L~~~ 1132 (1141)
.|++|+|+|+||.
T Consensus 275 itake~LaHpff~ 287 (411)
T KOG0599|consen 275 ITAKEALAHPFFI 287 (411)
T ss_pred ccHHHHhcChHHH
Confidence 9999999999994
No 38
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.5e-37 Score=355.95 Aligned_cols=249 Identities=25% Similarity=0.346 Sum_probs=199.4
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 889 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g 889 (1141)
+.||+|+||.||+|++ .+..+|+|+.+..... ..... ..+.+|+.++++++||||+++++++...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~----~~~~~e~~~l~~l~hp~i~~~~~~~~~~~------- 68 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVII-AKDEV----AHTLTESRVLQNTRHPFLTALKYSFQTHD------- 68 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhHHH----HHHHHHHHHHHhCCCCCCCCEEEEEEcCC-------
Confidence 4799999999999987 4567888876532211 11122 23478999999999999999999988655
Q ss_pred CCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCC
Q 001143 890 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 969 (1141)
Q Consensus 890 ~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~ 969 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 69 -------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~----- 131 (323)
T cd05571 69 -------RLCFVMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKD----- 131 (323)
T ss_pred -------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC-----
Confidence 34999999999999999875 3468999999999999999999999999999999999999887
Q ss_pred CCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001143 970 GKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPY 1049 (1141)
Q Consensus 970 ~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf 1049 (1141)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 132 --~~~kl~DfG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~elltg~~Pf 195 (323)
T cd05571 132 --GHIKITDFGLCKEGISDG----------ATMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPF 195 (323)
T ss_pred --CCEEEeeCCCCcccccCC----------CcccceecCccccChhhhcC----CCCCccccCcccchhhhhhhcCCCCC
Confidence 789999999986432111 11223469999999999876 56789999999999999999999999
Q ss_pred CCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHHH
Q 001143 1050 MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAGD 1124 (1141)
Q Consensus 1050 ~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-----Sa~E 1124 (1141)
.+.+.......+..... .++ ...+.++.+++.+||+.||++|| ++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~-~~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ 247 (323)
T cd05571 196 YNQDHEKLFELILMEEI-RFP---------------------------RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKE 247 (323)
T ss_pred CCCCHHHHHHHHHcCCC-CCC---------------------------CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHH
Confidence 87766665555533221 111 13456789999999999999999 8999
Q ss_pred HHHHHHhhc
Q 001143 1125 LYEMFVART 1133 (1141)
Q Consensus 1125 lL~~L~~~~ 1133 (1141)
+++|+|+..
T Consensus 248 ll~h~~f~~ 256 (323)
T cd05571 248 IMEHRFFAS 256 (323)
T ss_pred HHcCCCcCC
Confidence 999999864
No 39
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=358.25 Aligned_cols=257 Identities=20% Similarity=0.275 Sum_probs=207.3
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECC---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGS---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~---~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
...+.+|++.+.||+|+||.||+|.+.. ..+|+|+....... .....+ .+.+|+.+++.++||||+++++++
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~-~~~~~~----~~~~E~~~l~~l~hp~Iv~~~~~~ 100 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKII-KQKQVD----HVFSERKILNYINHPFCVNLYGSF 100 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhh-hhhhHH----HHHHHHHHHHhCCCCCCcceEEEE
Confidence 4567889999999999999999998643 35777775432111 111222 347899999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.. ..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 101 ~~~~--------------~~~lv~Ey~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~N 161 (340)
T PTZ00426 101 KDES--------------YLYLVLEFVIGGEFFTFLRR-----NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPEN 161 (340)
T ss_pred EeCC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHH
Confidence 8655 34999999999999999976 3468999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||++...... .....||+.|+|||++.+ ..++.++|||||||+
T Consensus 162 ILl~~~-------~~ikL~DFG~a~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvi 217 (340)
T PTZ00426 162 LLLDKD-------GFIKMTDFGFAKVVDTR-------------TYTLCGTPEYIAPEILLN----VGHGKAADWWTLGIF 217 (340)
T ss_pred EEECCC-------CCEEEecCCCCeecCCC-------------cceecCChhhcCHHHHhC----CCCCccccccchhhH
Confidence 999877 78999999998754321 113468999999999976 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|||++|..||.+.+.......+..+... ++ ...+..+.+++.+||+.||.+
T Consensus 218 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~l~~dp~~ 269 (340)
T PTZ00426 218 IYEILVGCPPFYANEPLLIYQKILEGIIY-FP---------------------------KFLDNNCKHLMKKLLSHDLTK 269 (340)
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHhcCCCC-CC---------------------------CCCCHHHHHHHHHHcccCHHH
Confidence 99999999999987766666665433211 00 033456899999999999999
Q ss_pred CC-----CHHHHHHHHHhhcC
Q 001143 1119 RP-----TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RP-----Sa~ElL~~L~~~~~ 1134 (1141)
|+ +++++++|+|+...
T Consensus 270 R~~~~~~~~~~~~~hp~f~~~ 290 (340)
T PTZ00426 270 RYGNLKKGAQNVKEHPWFGNI 290 (340)
T ss_pred cCCCCCCCHHHHHcCCCcCCC
Confidence 95 89999999999753
No 40
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.7e-37 Score=341.33 Aligned_cols=296 Identities=21% Similarity=0.252 Sum_probs=220.1
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCC-ccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC-IVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpN-IVkllg~~~~~ 881 (1141)
...|...++||+|+||+||+|+. .+..||+|..+++... +.......+|+.+++.++|+| ||.+++++...
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~------EG~P~taiREisllk~L~~~~~iv~L~dv~~~~ 83 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE------EGVPSTAIREISLLKRLSHANHIVRLHDVIHTS 83 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc------cCCCchhhHHHHHHHHhCCCcceEEEEeeeeec
Confidence 55688889999999999999997 4566787776665332 112333479999999999999 99999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
... .....+++||||++ .+|..++....... ..++...++.+++||+.||+|||+++|+||||||+||||
T Consensus 84 ~~~--------~~~~~l~lvfe~~d-~DL~~ymd~~~~~~-~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi 153 (323)
T KOG0594|consen 84 NNH--------RGIGKLYLVFEFLD-RDLKKYMDSLPKKP-QGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI 153 (323)
T ss_pred ccc--------cccceEEEEEEeec-ccHHHHHHhccccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE
Confidence 521 22346799999997 89999998743221 357779999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
++. +.+||+|||+|+....+... ....++|..|+|||++.+. ..|+...||||+|||++|
T Consensus 154 ~~~-------G~lKlaDFGlAra~~ip~~~----------yt~evvTlWYRaPEvLlGs---~~Ys~~vDiWs~GcIfaE 213 (323)
T KOG0594|consen 154 SSS-------GVLKLADFGLARAFSIPMRT----------YTPEVVTLWYRAPEVLLGS---TSYSTSVDIWSLGCIFAE 213 (323)
T ss_pred CCC-------CcEeeeccchHHHhcCCccc----------ccccEEEeeccCHHHhcCC---CcCCCCcchHhHHHHHHH
Confidence 987 89999999999865543322 2345789999999999983 468999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccc--cccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEH--EVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+++++.|.+.++.+....|.. ...|.. ..++........ .+.+...................+++.+||+++|.+
T Consensus 214 m~~~~~LFpG~se~~ql~~If~~lGtP~e-~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~ 292 (323)
T KOG0594|consen 214 MFTRRPLFPGDSEIDQLFRIFRLLGTPNE-KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAK 292 (323)
T ss_pred HHhCCCCCCCCcHHHHHHHHHHHcCCCCc-cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCccc
Confidence 9999999999888777766633 333321 222211111111 111111010011111123357899999999999999
Q ss_pred CCCHHHHHHHHHhhcCCCC
Q 001143 1119 RPTAGDLYEMFVARTSSSI 1137 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~s~~ 1137 (1141)
|.|++.++.|++|......
T Consensus 293 R~Sa~~al~h~yf~~~~~~ 311 (323)
T KOG0594|consen 293 RISAKGALTHPYFSELPEK 311 (323)
T ss_pred CcCHHHHhcChhhcccccc
Confidence 9999999999999866443
No 41
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=7.4e-37 Score=343.07 Aligned_cols=284 Identities=21% Similarity=0.236 Sum_probs=202.9
Q ss_pred CCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEe
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKI 879 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~---~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkllg~~~ 879 (1141)
.+|++.+.||+|+||.||+|++. +..+|+|+.+....... .... +.+|+.+++.+ .||||+++++++.
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~--~~~~----~~~e~~~l~~l~~~~hpniv~~~~~~~ 74 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--MPLS----TIREVAVLRHLETFEHPNVVRLFDVCT 74 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCC--chHH----HHHHHHHHHhhcccCCCCcceEEEEEe
Confidence 46999999999999999999873 45678887654322111 1112 24677776665 6999999999886
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.... ......++||||++ ++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+||
T Consensus 75 ~~~~---------~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Ni 141 (290)
T cd07862 75 VSRT---------DRETKLTLVFEHVD-QDLTTYLDK---VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI 141 (290)
T ss_pred cccC---------CCCCcEEEEEccCC-CCHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHE
Confidence 4221 01234699999997 799999875 2234589999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 142 l~~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~DiwslG~il 199 (290)
T cd07862 142 LVTSS-------GQIKLADFGLARIYSFQM-----------ALTSVVVTLWYRAPEVLLQ----SSYATPVDLWSVGCIF 199 (290)
T ss_pred EEcCC-------CCEEEccccceEeccCCc-----------ccccccccccccChHHHhC----CCCCCccchHHHHHHH
Confidence 99887 789999999987543211 1123468999999999875 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|||++|++||.+....+....+........+..++........ .................+..+.+++.+||+.||++|
T Consensus 200 ~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 278 (290)
T cd07862 200 AEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQ-AFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKR 278 (290)
T ss_pred HHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccch-hccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhc
Confidence 9999999999987776666555332222211111110000000 000000000111112456778999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001143 1120 PTAGDLYEMFVA 1131 (1141)
Q Consensus 1120 PSa~ElL~~L~~ 1131 (1141)
||+.|+++|+||
T Consensus 279 ~s~~~~l~hp~f 290 (290)
T cd07862 279 ISAYSALSHPYF 290 (290)
T ss_pred CCHHHHhcCCCC
Confidence 999999999986
No 42
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.9e-37 Score=345.69 Aligned_cols=260 Identities=23% Similarity=0.288 Sum_probs=199.6
Q ss_pred CceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|++.+.||+|+||.||+|.+ .+..+|+|+........ .. ....+.+|+.++.+++|+||+++++++.+.+.
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~----~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~- 74 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKK-RK----GEAMALNEKRILEKVNSRFVVSLAYAYETKDA- 74 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhh-hh----hHHHHHHHHHHHHhcCCCcEEEEEEEEccCCe-
Confidence 378899999999999999987 46677877654221111 11 11234789999999999999999999876553
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.++||||+++|+|.+++.. .....+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 75 -------------~~lv~e~~~~g~L~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~ 138 (285)
T cd05631 75 -------------LCLVLTIMNGGDLKFHIYN---MGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDR 138 (285)
T ss_pred -------------EEEEEEecCCCcHHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC
Confidence 4999999999999988865 223468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||++........ .....||..|+|||++.+ ..++.++|||||||++|+|++
T Consensus 139 -------~~~kl~Dfg~~~~~~~~~~-----------~~~~~g~~~y~aPE~~~~----~~~~~~~DvwslGvil~el~~ 196 (285)
T cd05631 139 -------GHIRISDLGLAVQIPEGET-----------VRGRVGTVGYMAPEVINN----EKYTFSPDWWGLGCLIYEMIQ 196 (285)
T ss_pred -------CCEEEeeCCCcEEcCCCCe-----------ecCCCCCCCccCHhhhcC----CCCCcccCchhHHHHHHHHHh
Confidence 7899999999876432111 113468999999999976 568899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC---
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT--- 1121 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS--- 1121 (1141)
|+.||...........+........ . ......+..+.+|+.+||+.||.+||+
T Consensus 197 g~~pf~~~~~~~~~~~~~~~~~~~~-------------------~-----~~~~~~s~~~~~li~~~l~~~P~~R~~~~~ 252 (285)
T cd05631 197 GQSPFRKRKERVKREEVDRRVKEDQ-------------------E-----EYSEKFSEDAKSICRMLLTKNPKERLGCRG 252 (285)
T ss_pred CCCCCCCCCcchhHHHHHHHhhccc-------------------c-----cCCccCCHHHHHHHHHHhhcCHHHhcCCCC
Confidence 9999986543222222211000000 0 000134567899999999999999997
Q ss_pred --HHHHHHHHHhhcC
Q 001143 1122 --AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 --a~ElL~~L~~~~~ 1134 (1141)
++++++|+|+...
T Consensus 253 ~~~~~~~~h~~~~~~ 267 (285)
T cd05631 253 NGAAGVKQHPIFKNI 267 (285)
T ss_pred CCHHHHhcCHhhcCC
Confidence 9999999999754
No 43
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.2e-36 Score=363.53 Aligned_cols=289 Identities=19% Similarity=0.243 Sum_probs=204.5
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.-.+|++.++||+|+||.||+|.+. +..+|+|..... . .. ..+|+.+++.++|||||++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~----~----~~----~~~Ei~il~~l~h~niv~l~~~~~~~ 131 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQD----P----QY----KNRELLIMKNLNHINIIFLKDYYYTE 131 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecC----c----ch----HHHHHHHHHhcCCCCCcceeeeEeec
Confidence 4467999999999999999999984 556777754211 0 11 14799999999999999999987643
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
... ........++||||++ ++|.+++..... ....+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 132 ~~~------~~~~~~~l~lvmE~~~-~~l~~~~~~~~~-~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl 203 (440)
T PTZ00036 132 CFK------KNEKNIFLNVVMEFIP-QTVHKYMKHYAR-NNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLI 203 (440)
T ss_pred ccc------cCCCceEEEEEEecCC-ccHHHHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEE
Confidence 211 1112235689999997 688888765322 23579999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.++ +.+||+|||+|+.+.... ......||+.|+|||++.+ ...++.++|||||||++||
T Consensus 204 ~~~~------~~vkL~DFGla~~~~~~~-----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlGvil~e 263 (440)
T PTZ00036 204 DPNT------HTLKLCDFGSAKNLLAGQ-----------RSVSYICSRFYRAPELMLG---ATNYTTHIDLWSLGCIIAE 263 (440)
T ss_pred cCCC------CceeeeccccchhccCCC-----------CcccCCCCcCccCHHHhcC---CCCCCcHHHHHHHHHHHHH
Confidence 8652 479999999997653211 1113468999999999875 2357899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhc-cCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALG-SCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|++|.+||.+....+....+ .....+... .+.... ......+................+.++.+||.+||++||.+|
T Consensus 264 lltG~~pf~~~~~~~~~~~i~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R 342 (440)
T PTZ00036 264 MILGYPIFSGQSSVDQLVRIIQVLGTPTED-QLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKR 342 (440)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCCHH-HHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHC
Confidence 99999999887665554444 322222221 111100 000000000000000000111346789999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
||+.|+++|+||..
T Consensus 343 ~ta~e~l~hp~f~~ 356 (440)
T PTZ00036 343 LNPIEALADPFFDD 356 (440)
T ss_pred cCHHHHhCChhHHh
Confidence 99999999999864
No 44
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-37 Score=324.50 Aligned_cols=263 Identities=22% Similarity=0.256 Sum_probs=220.1
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
...++++|++++.||+|-||.||+|+.+.+...|+++.+.+. .-.....+.++.+|++|...|+||||.++|++|.+
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKs---qi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd 93 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKS---QILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD 93 (281)
T ss_pred cccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHH---HHHHhcchhhhhheeEeecccCCccHHhhhhheec
Confidence 345688999999999999999999998766655554444332 23333455677999999999999999999999998
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
+... |+++||.++|+|+..++. ....++++..+..+++|++.||.|+|.++||||||||+|+|
T Consensus 94 ~~ri--------------yLilEya~~gel~k~L~~---~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlL 156 (281)
T KOG0580|consen 94 SKRI--------------YLILEYAPRGELYKDLQE---GRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLL 156 (281)
T ss_pred ccee--------------EEEEEecCCchHHHHHHh---cccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhc
Confidence 7644 999999999999999985 34567999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+|++|||-+..-.. ....+.+||..|.+||+..+ ..++..+|+|++|++.|
T Consensus 157 lg~~-------~~lkiAdfGwsV~~p~------------~kR~tlcgt~dyl~pEmv~~----~~hd~~Vd~w~lgvl~y 213 (281)
T KOG0580|consen 157 LGSA-------GELKIADFGWSVHAPS------------NKRKTLCGTLDYLPPEMVEG----RGHDKFVDLWSLGVLCY 213 (281)
T ss_pred cCCC-------CCeeccCCCceeecCC------------CCceeeecccccCCHhhcCC----CCccchhhHHHHHHHHH
Confidence 9988 7899999998865321 12346789999999999887 66789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++.|.+||......+.+..|........ ..++..++++|.+|+..+|.+|.
T Consensus 214 eflvg~ppFes~~~~etYkrI~k~~~~~p----------------------------~~is~~a~dlI~~ll~~~p~~r~ 265 (281)
T KOG0580|consen 214 EFLVGLPPFESQSHSETYKRIRKVDLKFP----------------------------STISGGAADLISRLLVKNPIERL 265 (281)
T ss_pred HHHhcCCchhhhhhHHHHHHHHHccccCC----------------------------cccChhHHHHHHHHhccCccccc
Confidence 99999999998887788888765432110 15667899999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
+..|+++|+|....
T Consensus 266 ~l~~v~~hpwI~a~ 279 (281)
T KOG0580|consen 266 ALTEVMDHPWIVAN 279 (281)
T ss_pred cHHHHhhhHHHHhc
Confidence 99999999997643
No 45
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.9e-37 Score=343.14 Aligned_cols=275 Identities=24% Similarity=0.302 Sum_probs=218.5
Q ss_pred CCCCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+..|++.+.||+|.-|+||+|+..+ ...|+||. ++.. -..+.-..+++.|-+||+.+.||.++.+|+.|+.
T Consensus 74 l~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVm--dK~~---l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet 148 (459)
T KOG0610|consen 74 LGLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVM--DKES---LASRKKLKRAQTEREILSLLDHPFLPTLYASFET 148 (459)
T ss_pred cCHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEe--cHHH---HhhhhHHHHHHHHHHHHHhcCCCccchhhheeec
Confidence 346678999999999999999999876 56677764 3221 1112222456889999999999999999999998
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
+.+. |+|||||+||+|..+.++ +..+.+++..++.++.+|+.||+|||-.|||+|||||+|||
T Consensus 149 ~~~~--------------cl~meyCpGGdL~~Lrqk---Qp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENIL 211 (459)
T KOG0610|consen 149 DKYS--------------CLVMEYCPGGDLHSLRQK---QPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENIL 211 (459)
T ss_pred ccee--------------EEEEecCCCccHHHHHhh---CCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeE
Confidence 7755 999999999999999887 56678999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeecccccccccccc---------------------cc-------ccc-----------------
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLH---------------------TC-------CIA----------------- 995 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~---------------------~~-------~~~----------------- 995 (1141)
|.++ |++.|+||.++......-. .+ ...
T Consensus 212 vred-------GHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~ 284 (459)
T KOG0610|consen 212 VRED-------GHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELV 284 (459)
T ss_pred EecC-------CcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhh
Confidence 9988 9999999998864311000 00 000
Q ss_pred -cCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHh
Q 001143 996 -HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELE 1074 (1141)
Q Consensus 996 -~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~ 1074 (1141)
.........++||-.|.|||++.+ ...+.++|+|+|||++|||+.|..||.+.+..+.+..|..... .++.
T Consensus 285 aep~~~RSnSFVGThEYlAPEvI~G----~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l-~Fp~--- 356 (459)
T KOG0610|consen 285 AEPTGARSNSFVGTHEYLAPEVIRG----EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPL-KFPE--- 356 (459)
T ss_pred cCCCCccccccccccccccceeeec----CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCC-cCCC---
Confidence 011122346799999999999998 5567999999999999999999999999988887777643221 1111
Q ss_pred hhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC----HHHHHHHHHhhcCCC
Q 001143 1075 ALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT----AGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1075 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS----a~ElL~~L~~~~~s~ 1136 (1141)
. ...+..+++||+++|.+||.+|.. |.||-+|+||+.-.|
T Consensus 357 ---------------------~-~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnW 400 (459)
T KOG0610|consen 357 ---------------------E-PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNW 400 (459)
T ss_pred ---------------------C-CcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCCh
Confidence 0 155677999999999999999998 999999999986544
No 46
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=357.10 Aligned_cols=258 Identities=26% Similarity=0.319 Sum_probs=218.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|..++++|+|+||.+++++++ +..+++|.+.+.... ....+. ..+|+.++++++|||||.+.+.|.+++
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t--~~~r~~----A~~E~~lis~~~hP~iv~y~ds~~~~~ 76 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLT--EPERRS----AIQEMDLLSKLLHPNIVEYKDSFEEDG 76 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccC--chhhHH----HHHHHHHHHhccCCCeeeeccchhcCC
Confidence 568999999999999999998874 456777776655433 232223 379999999999999999999998876
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .++|||+||+||++.+.|... ....++++.+..|+.||+.|++|||+++|+|||||+.|||++
T Consensus 77 ~-------------~l~Ivm~Y~eGg~l~~~i~~~---k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt 140 (426)
T KOG0589|consen 77 Q-------------LLCIVMEYCEGGDLAQLIKEQ---KGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT 140 (426)
T ss_pred c-------------eEEEEEeecCCCCHHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc
Confidence 4 259999999999999999873 246799999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ ..|+|+|||+|+.+..... .....+||+.||.||++.+ .+|+.|+|||||||++|||
T Consensus 141 k~-------~~VkLgDfGlaK~l~~~~~----------~a~tvvGTp~YmcPEil~d----~pYn~KSDiWsLGC~~yEm 199 (426)
T KOG0589|consen 141 KD-------KKVKLGDFGLAKILNPEDS----------LASTVVGTPYYMCPEILSD----IPYNEKSDIWSLGCCLYEM 199 (426)
T ss_pred cc-------CceeecchhhhhhcCCchh----------hhheecCCCcccCHHHhCC----CCCCccCcchhhcchHHHH
Confidence 88 6789999999998765321 2346789999999999998 7899999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++-+++|.+.+...+...|..+...+++. ..+.+++.+|..||..+|..||++
T Consensus 200 ~~lk~aF~a~~m~~Li~ki~~~~~~Plp~---------------------------~ys~el~~lv~~~l~~~P~~RPsa 252 (426)
T KOG0589|consen 200 CTLKPAFKASNMSELILKINRGLYSPLPS---------------------------MYSSELRSLVKSMLRKNPEHRPSA 252 (426)
T ss_pred HhcccccCccchHHHHHHHhhccCCCCCc---------------------------cccHHHHHHHHHHhhcCCccCCCH
Confidence 99999999988888888886665443332 566789999999999999999999
Q ss_pred HHHHHHHHhh
Q 001143 1123 GDLYEMFVAR 1132 (1141)
Q Consensus 1123 ~ElL~~L~~~ 1132 (1141)
.++|.++...
T Consensus 253 ~~LL~~P~l~ 262 (426)
T KOG0589|consen 253 LELLRRPHLL 262 (426)
T ss_pred HHHhhChhhh
Confidence 9999986554
No 47
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.3e-36 Score=344.31 Aligned_cols=284 Identities=20% Similarity=0.277 Sum_probs=201.4
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
+..++|++.++||+|+||.||+|++. +..+|+|+...... . ... ..+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~-~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~ 74 (303)
T cd07869 2 GKADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEE--E-GTP----FTAIREASLLKGLKHANIVLLHDIIHT 74 (303)
T ss_pred CccccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccc--c-ccc----hhHHHHHHHHhhCCCCCcCeEEEEEec
Confidence 34578999999999999999999984 56788887543221 1 111 123689999999999999999999886
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..++||||++ ++|.+++.. ....+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 75 ~~--------------~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nil 135 (303)
T cd07869 75 KE--------------TLTLVFEYVH-TDLCQYMDK----HPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLL 135 (303)
T ss_pred CC--------------eEEEEEECCC-cCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 54 3499999996 788888765 1246899999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||++........ ......+|+.|+|||++.+ ...++.++|||||||++|
T Consensus 136 l~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il~ 195 (303)
T cd07869 136 ISDT-------GELKLADFGLARAKSVPSH----------TYSNEVVTLWYRPPDVLLG---STEYSTCLDMWGVGCIFV 195 (303)
T ss_pred ECCC-------CCEEECCCCcceeccCCCc----------cCCCCcccCCCCChHHHcC---CCCCCcHHHHHHHHHHHH
Confidence 9877 7899999999865432111 1123458999999999865 235788999999999999
Q ss_pred HHHhCCCCCCCCCHH-HHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCch-----hhhhhHHHHHHHHHHhcc
Q 001143 1041 ELLTLQVPYMGLSEL-EIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE-----AELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~-el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~L~dLI~~cL~ 1113 (1141)
+|++|+.||.+.... +....+ .....+.. ..+....... .............. .....++.+.+|+.+||+
T Consensus 196 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~ 273 (303)
T cd07869 196 EMIQGVAAFPGMKDIQDQLERIFLVLGTPNE-DTWPGVHSLP-HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQ 273 (303)
T ss_pred HHHhCCCCCCCCccHHHHHHHHHHHhCCCCh-hhccchhhcc-ccccccccccCCccHHHHhhccCCChHHHHHHHHHhc
Confidence 999999999864332 223322 11111111 0000000000 00000000000000 001234678899999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001143 1114 ENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.||++|||+.|+++|+||...
T Consensus 274 ~dp~~R~s~~~~l~h~~f~~~ 294 (303)
T cd07869 274 CFPKNRLSAQAALSHEYFSDL 294 (303)
T ss_pred cCchhccCHHHHhcCcccccC
Confidence 999999999999999999754
No 48
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.3e-36 Score=353.80 Aligned_cols=267 Identities=20% Similarity=0.204 Sum_probs=202.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||+||+|.+. +..+|+|+...... ........+.+|+.++.+++||||+++++.+.+...
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~ 75 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM-----LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLN 75 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH-----HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCe
Confidence 47899999999999999999874 56788887542211 011112334789999999999999999999986553
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.|+||||++||+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 76 --------------~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~ 136 (363)
T cd05628 76 --------------LYLIMEFLPGGDMMTLLMK-----KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDS 136 (363)
T ss_pred --------------EEEEEcCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECC
Confidence 4999999999999999976 346999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeecccccccccccccccccc-------------------------CCCCCCCCccCCCcccchhhhc
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH-------------------------RGIPAPDVCVGTPRWMAPEVLR 1018 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~-------------------------~~~~~~~~~~GT~~Y~APE~l~ 1018 (1141)
+ +.+||+|||+++.+........... .........+||+.|+|||++.
T Consensus 137 ~-------~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~ 209 (363)
T cd05628 137 K-------GHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM 209 (363)
T ss_pred C-------CCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc
Confidence 7 7899999999975432111000000 0000012347999999999997
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhh
Q 001143 1019 AMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1097 (1141)
Q Consensus 1019 ~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1141)
+ ..++.++|||||||++|||++|+.||.+....+....+..... ..++. .
T Consensus 210 ~----~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~ 260 (363)
T cd05628 210 Q----TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP-------------------------E 260 (363)
T ss_pred C----CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCC-------------------------c
Confidence 6 5678999999999999999999999998777776666643221 11110 0
Q ss_pred hhhHHHHHHHHHHhcccCCC---CCCCHHHHHHHHHhhc
Q 001143 1098 LETLSFLVDVFRRCTEENPT---ERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1098 ~~~~~~L~dLI~~cL~~DP~---~RPSa~ElL~~L~~~~ 1133 (1141)
...++++.+++.+|+. +|. .||+++||++|+|+..
T Consensus 261 ~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~ 298 (363)
T cd05628 261 VPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEG 298 (363)
T ss_pred CCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCC
Confidence 0345568888888664 444 4689999999999964
No 49
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=7.6e-37 Score=351.23 Aligned_cols=259 Identities=24% Similarity=0.321 Sum_probs=206.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|++. +..+|+|+....... ..... ..+.+|+.++..++||||+++++++.+..
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~----~~~~~e~~~l~~~~h~~iv~~~~~~~~~~- 74 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLF-KLNEV----RHVLTERDILTTTKSEWLVKLLYAFQDDE- 74 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHH----HHHHHHHHHHHhCCCCCCccEEEEEEcCC-
Confidence 36999999999999999999984 567888876533211 11112 23478999999999999999999988655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..|+||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~ 136 (333)
T cd05600 75 -------------YLYLAMEYVPGGDFRTLLNN-----LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDA 136 (333)
T ss_pred -------------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC
Confidence 35999999999999999975 346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++..... ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 137 ~-------~~~kL~Dfg~a~~~~~-------------~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~ell 192 (333)
T cd05600 137 S-------GHIKLTDFGLSKGIVT-------------YANSVVGSPDYMAPEVLRG----KGYDFTVDYWSLGCMLYEFL 192 (333)
T ss_pred C-------CCEEEEeCcCCccccc-------------ccCCcccCccccChhHhcC----CCCCCccceecchHHHhhhh
Confidence 7 7899999999875432 1123468999999999976 46889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCC-CchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRP-RLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+|..||...+..+....+...... ..+. ........+.++.+++.+||..+|.+||++
T Consensus 193 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---------------------~~~~~~~~s~~~~~li~~~l~~~~~rr~s~ 251 (333)
T cd05600 193 CGFPPFSGSTPNETWENLKYWKETLQRPV---------------------YDDPRFNLSDEAWDLITKLINDPSRRFGSL 251 (333)
T ss_pred hCCCCCCCCCHHHHHHHHHhccccccCCC---------------------CCccccccCHHHHHHHHHHhhChhhhcCCH
Confidence 999999987776666555332110 0000 000001446679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
.++++|+|+..
T Consensus 252 ~~ll~h~~~~~ 262 (333)
T cd05600 252 EDIKNHPFFKE 262 (333)
T ss_pred HHHHhCcccCC
Confidence 99999999875
No 50
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.9e-36 Score=348.24 Aligned_cols=262 Identities=23% Similarity=0.353 Sum_probs=197.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg 876 (1141)
-++|++.++||+|+||.||+|.+. +..||+|+.+.. ......+. +.+|+.++.++ +||||+++++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~h~niv~~~~ 78 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG---ATASEHKA----LMSELKILIHIGNHLNVVNLLG 78 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc---cchHHHHH----HHHHHHHHHHhccCcceeeEEe
Confidence 457999999999999999999752 245777764321 12222233 47999999999 8999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc------------------------------------
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------------------------ 920 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~------------------------------------ 920 (1141)
++..... ..++||||+++|+|.+++......
T Consensus 79 ~~~~~~~-------------~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (338)
T cd05102 79 ACTKPNG-------------PLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVL 145 (338)
T ss_pred EecCCCC-------------ceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCcc
Confidence 8765321 358999999999999999752110
Q ss_pred ---------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeec
Q 001143 921 ---------------------GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDF 979 (1141)
Q Consensus 921 ---------------------~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DF 979 (1141)
...++++..+..++.||+.||.|||++||+||||||+|||++.+ +.+||+||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~-------~~~kl~Df 218 (338)
T cd05102 146 FSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSEN-------NVVKICDF 218 (338)
T ss_pred ccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCC-------CcEEEeec
Confidence 01358889999999999999999999999999999999999877 78999999
Q ss_pred cccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-H
Q 001143 980 DRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-I 1057 (1141)
Q Consensus 980 GlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~e-l 1057 (1141)
|+++.+...... .......+++.|+|||++.+ ..++.++|||||||++|||++ |..||.+....+ .
T Consensus 219 G~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~ 286 (338)
T cd05102 219 GLARDIYKDPDY--------VRKGSARLPLKWMAPESIFD----KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEF 286 (338)
T ss_pred ccccccccCcch--------hcccCCCCCccccCcHHhhc----CCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHH
Confidence 999764321110 01122346788999999876 567899999999999999997 999998644322 2
Q ss_pred HHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1058 HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1058 ~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
...+..+..+..+ ...++.+.+++.+||+.||.+|||+.|+++.+...
T Consensus 287 ~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~ 334 (338)
T cd05102 287 CQRLKDGTRMRAP---------------------------ENATPEIYRIMLACWQGDPKERPTFSALVEILGDL 334 (338)
T ss_pred HHHHhcCCCCCCC---------------------------CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 3333322221111 13456799999999999999999999999987643
No 51
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4e-36 Score=345.29 Aligned_cols=281 Identities=23% Similarity=0.300 Sum_probs=204.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||+|+||.||+|++. +..+|+|+..... .... ..++.+|++++++++||||+++++++...+
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 76 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI---KPAI----RNQIIRELQVLHECNSPYIVGFYGAFYSDG 76 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHH----HHHHHHHHHHHHHCCCCCCCeEEEEEEECC
Confidence 467999999999999999999985 4556677654321 1222 233489999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCCeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENILI 961 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~NILl 961 (1141)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||+
T Consensus 77 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~ 137 (331)
T cd06649 77 --------------EISICMEHMDGGSLDQVLKE-----AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILV 137 (331)
T ss_pred --------------EEEEEeecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEE
Confidence 34999999999999999976 24689999999999999999999986 69999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||++....... .....||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 138 ~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslG~il~e 194 (331)
T cd06649 138 NSR-------GEIKLCDFGVSGQLIDSM------------ANSFVGTRSYMSPERLQG----THYSVQSDIWSMGLSLVE 194 (331)
T ss_pred cCC-------CcEEEccCcccccccccc------------cccCCCCcCcCCHhHhcC----CCCCchHhHHHHHHHHHH
Confidence 887 789999999986543211 123468999999999876 567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCc---hhHHhhhccCcccccc----------------c-cCCCCCCchhhhhhH
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRL---TDELEALGSCHEHEVA----------------Q-SGSGFEKPEAELETL 1101 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l---~~~l~~~~~~~~~~~~----------------~-~~~~~~~~~~~~~~~ 1101 (1141)
|++|+.||......++...+........ ................ . ..............+
T Consensus 195 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (331)
T cd06649 195 LAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFT 274 (331)
T ss_pred HHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCcccc
Confidence 9999999987665554433321100000 0000000000000000 0 000000000011356
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1102 SFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1102 ~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.++++|+.+||+.||++|||+.++++|+|+...
T Consensus 275 ~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 307 (331)
T cd06649 275 PDFQEFVNKCLIKNPAERADLKMLMNHTFIKRS 307 (331)
T ss_pred HHHHHHHHHHccCCcccCCCHHHHhcChHHhhc
Confidence 789999999999999999999999999998643
No 52
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=9.1e-37 Score=354.73 Aligned_cols=267 Identities=21% Similarity=0.263 Sum_probs=204.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||+||+|++. +..+|+|+....... ..... ..+.+|+.++..++||||+++++++.+...
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~ 75 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEML-EKEQV----AHVRAERDILAEADNPWVVKLYYSFQDENY 75 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHH----HHHHHHHHHHHhCCCCCCcceEEEEEcCCe
Confidence 47999999999999999999984 567888876532111 11112 234789999999999999999999987653
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++|+|.+++.. ...+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 76 --------------~~lv~E~~~~g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~ 136 (364)
T cd05599 76 --------------LYLIMEYLPGGDMMTLLMK-----KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA 136 (364)
T ss_pred --------------EEEEECCCCCcHHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECC
Confidence 4999999999999999875 346999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccC----------------------------CCCCCCCccCCCcccchh
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHR----------------------------GIPAPDVCVGTPRWMAPE 1015 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~----------------------------~~~~~~~~~GT~~Y~APE 1015 (1141)
+ +.+||+|||++..+............ ........+||+.|+|||
T Consensus 137 ~-------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 209 (364)
T cd05599 137 K-------GHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPE 209 (364)
T ss_pred C-------CCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHH
Confidence 7 78999999998754321110000000 000011246999999999
Q ss_pred hhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CchhHHhhhccCccccccccCCCCCCc
Q 001143 1016 VLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRP-RLTDELEALGSCHEHEVAQSGSGFEKP 1094 (1141)
Q Consensus 1016 ~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p-~l~~~l~~~~~~~~~~~~~~~~~~~~~ 1094 (1141)
++.. ..++.++|||||||++|||++|..||.+.+..+....+...... ..+.
T Consensus 210 ~~~~----~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~----------------------- 262 (364)
T cd05599 210 VFLQ----TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPD----------------------- 262 (364)
T ss_pred HHcC----CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCC-----------------------
Confidence 9875 56789999999999999999999999887776665555332110 0000
Q ss_pred hhhhhhHHHHHHHHHHhcccCCCCCCC---HHHHHHHHHhhc
Q 001143 1095 EAELETLSFLVDVFRRCTEENPTERPT---AGDLYEMFVART 1133 (1141)
Q Consensus 1095 ~~~~~~~~~L~dLI~~cL~~DP~~RPS---a~ElL~~L~~~~ 1133 (1141)
....++.+.++|.+|+. +|.+|++ +.|+++|+|+..
T Consensus 263 --~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~ 301 (364)
T cd05599 263 --EVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKG 301 (364)
T ss_pred --CCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 00345678999999996 9999997 999999999864
No 53
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=9.2e-37 Score=347.54 Aligned_cols=247 Identities=24% Similarity=0.301 Sum_probs=196.5
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 814 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 814 LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
||+|+||.||+|++. +..+|+|+...... ....... .+.+|+.++++++||||+++++++....
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~--------- 66 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI-VSRSEVT----HTLAERTVLAQVNCPFIVPLKFSFQSPE--------- 66 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHH----HHHHHHHHHHhCCCCcEeceeeEEecCC---------
Confidence 799999999999985 45677776542211 1112222 3378999999999999999999987654
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 971 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~ 971 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 67 -----~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~------- 129 (312)
T cd05585 67 -----KLYLVLAFINGGELFHHLQR-----EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQ------- 129 (312)
T ss_pred -----eEEEEEcCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCC-------
Confidence 34999999999999999875 3468999999999999999999999999999999999999887
Q ss_pred CeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001143 972 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1051 (1141)
Q Consensus 972 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~ 1051 (1141)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus 130 ~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslGvil~el~tg~~pf~~ 195 (312)
T cd05585 130 GHIALCDFGLCKLNMKDD----------DKTNTFCGTPEYLAPELLLG----HGYTKAVDWWTLGVLLYEMLTGLPPFYD 195 (312)
T ss_pred CcEEEEECcccccCccCC----------CccccccCCcccCCHHHHcC----CCCCCccceechhHHHHHHHhCCCCcCC
Confidence 789999999986532211 01123468999999999976 5678999999999999999999999988
Q ss_pred CCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC---CHHHHHHH
Q 001143 1052 LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP---TAGDLYEM 1128 (1141)
Q Consensus 1052 ~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP---Sa~ElL~~ 1128 (1141)
.+..+....+..... .++ ...+..+.+++.+||..||.+|| ++.|++.|
T Consensus 196 ~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 196 ENVNEMYRKILQEPL-RFP---------------------------DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred CCHHHHHHHHHcCCC-CCC---------------------------CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 776666555543221 110 13456789999999999999997 58999999
Q ss_pred HHhhc
Q 001143 1129 FVART 1133 (1141)
Q Consensus 1129 L~~~~ 1133 (1141)
+|+..
T Consensus 248 p~~~~ 252 (312)
T cd05585 248 PFFSQ 252 (312)
T ss_pred CCcCC
Confidence 99875
No 54
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=5.4e-36 Score=340.17 Aligned_cols=287 Identities=18% Similarity=0.234 Sum_probs=207.7
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+..+++|.+.++||+|+||.||+|++. +..+|+|..+.... . .... .+.+|+.++++++||||+++++++.
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~-~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~ 74 (309)
T cd07872 2 FGKMETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHE--E-GAPC----TAIREVSLLKDLKHANIVTLHDIVH 74 (309)
T ss_pred CCCCCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeecccc--C-Ccch----hHHHHHHHHHhCCCCCcceEEEEEe
Confidence 456788999999999999999999874 45677776543321 1 1111 2368999999999999999999988
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.++. .++||||++ ++|.+++... ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 75 ~~~~--------------~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Ni 135 (309)
T cd07872 75 TDKS--------------LTLVFEYLD-KDLKQYMDDC----GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNL 135 (309)
T ss_pred eCCe--------------EEEEEeCCC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHE
Confidence 6553 499999997 5888887652 23589999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.+||+|||++........ ......+|+.|+|||++.+ ...++.++|||||||++
T Consensus 136 ll~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il 195 (309)
T cd07872 136 LINER-------GELKLADFGLARAKSVPTK----------TYSNEVVTLWYRPPDVLLG---SSEYSTQIDMWGVGCIF 195 (309)
T ss_pred EECCC-------CCEEECccccceecCCCcc----------ccccccccccccCCHHHhC---CCCCCcHHHHHHHHHHH
Confidence 99887 7899999999865432111 1112357899999999865 24578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCC--chhhhhhHHHHHHHHHHhcccCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK--PEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
|+|++|+.||.+.+..+....+...........+.................... .......+.++.+++.+||+.||.
T Consensus 196 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~ 275 (309)
T cd07872 196 FEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESK 275 (309)
T ss_pred HHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChh
Confidence 999999999988776665555433222222111111100000000000000000 001124567789999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001143 1118 ERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~~ 1134 (1141)
+|||+.|+++|+|++..
T Consensus 276 ~R~t~~e~l~h~~~~~~ 292 (309)
T cd07872 276 KRISAEEAMKHAYFRSL 292 (309)
T ss_pred hCCCHHHHhcChhhhhc
Confidence 99999999999999854
No 55
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.3e-36 Score=348.15 Aligned_cols=250 Identities=26% Similarity=0.324 Sum_probs=198.3
Q ss_pred eeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~-----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
++||+|+||.||+|++ .+..+|+|+............ ...+..|+.+++.++||||+++++++..++
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~----~~~~~~E~~il~~l~hp~iv~~~~~~~~~~---- 73 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKD----TAHTKAERNILEAVKHPFIVDLIYAFQTGG---- 73 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhh----HHHHHHHHHHHHhCCCCchhceeeEEecCC----
Confidence 6899999999999986 356788887643211111111 123478999999999999999999988655
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
..|+||||+++++|.+++.+ ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 74 ----------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~-- 136 (323)
T cd05584 74 ----------KLYLILEYLSGGELFMHLER-----EGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQ-- 136 (323)
T ss_pred ----------eEEEEEeCCCCchHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC--
Confidence 34999999999999999876 3468899999999999999999999999999999999999887
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1046 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk 1046 (1141)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 137 -----~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ell~G~ 197 (323)
T cd05584 137 -----GHVKLTDFGLCKESIHEG----------TVTHTFCGTIEYMAPEILMR----SGHGKAVDWWSLGALMYDMLTGA 197 (323)
T ss_pred -----CCEEEeeCcCCeecccCC----------CcccccCCCccccChhhccC----CCCCCcceecccHHHHHHHhcCC
Confidence 789999999986432111 01123468999999999876 45778999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----C
Q 001143 1047 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----T 1121 (1141)
Q Consensus 1047 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-----S 1121 (1141)
.||...+..+....+..+... ++ ...++.+.+++.+||+.||++|| +
T Consensus 198 ~pf~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~ 249 (323)
T cd05584 198 PPFTAENRKKTIDKILKGKLN-LP---------------------------PYLTPEARDLLKKLLKRNPSSRLGAGPGD 249 (323)
T ss_pred CCCCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHcccCHhHcCCCCCCC
Confidence 999887766655555433211 10 13456789999999999999999 8
Q ss_pred HHHHHHHHHhhc
Q 001143 1122 AGDLYEMFVART 1133 (1141)
Q Consensus 1122 a~ElL~~L~~~~ 1133 (1141)
+.++++|+|+..
T Consensus 250 ~~~l~~h~~~~~ 261 (323)
T cd05584 250 AAEVQSHPFFRH 261 (323)
T ss_pred HHHHhcCCCcCC
Confidence 999999999864
No 56
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.4e-36 Score=348.93 Aligned_cols=249 Identities=24% Similarity=0.347 Sum_probs=197.8
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 889 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g 889 (1141)
+.||+|+||.||+|.+. +..+|+|+...... ....... .+.+|+.+++.++||||+++++++...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~-~~~~~~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~~------- 68 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI-IAKDEVA----HTLTESRVLKNTRHPFLTSLKYSFQTKD------- 68 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhhHHH----HHHHHHHHHHhCCCCCCcceEEEEEcCC-------
Confidence 47999999999999874 56788887643221 1112222 3478999999999999999999988655
Q ss_pred CCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCC
Q 001143 890 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 969 (1141)
Q Consensus 890 ~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~ 969 (1141)
..++||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 69 -------~~~lv~Ey~~~g~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~----- 131 (328)
T cd05593 69 -------RLCFVMEYVNGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKD----- 131 (328)
T ss_pred -------EEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCC-----
Confidence 34999999999999988865 3469999999999999999999999999999999999999887
Q ss_pred CCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001143 970 GKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPY 1049 (1141)
Q Consensus 970 ~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf 1049 (1141)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus 132 --~~~kL~DfG~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~elltG~~Pf 195 (328)
T cd05593 132 --GHIKITDFGLCKEGITDA----------ATMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPF 195 (328)
T ss_pred --CcEEEecCcCCccCCCcc----------cccccccCCcCccChhhhcC----CCCCccCCccccchHHHHHhhCCCCC
Confidence 789999999986432111 01123468999999999876 56789999999999999999999999
Q ss_pred CCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHHH
Q 001143 1050 MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAGD 1124 (1141)
Q Consensus 1050 ~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-----Sa~E 1124 (1141)
.+.+..+....+..... .++ ...+.++.+++.+||+.||.+|| ++.|
T Consensus 196 ~~~~~~~~~~~~~~~~~-~~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ 247 (328)
T cd05593 196 YNQDHEKLFELILMEDI-KFP---------------------------RTLSADAKSLLSGLLIKDPNKRLGGGPDDAKE 247 (328)
T ss_pred CCCCHHHHHHHhccCCc-cCC---------------------------CCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 87666655554432211 111 13456789999999999999997 8999
Q ss_pred HHHHHHhhc
Q 001143 1125 LYEMFVART 1133 (1141)
Q Consensus 1125 lL~~L~~~~ 1133 (1141)
+++|+|+..
T Consensus 248 il~h~~~~~ 256 (328)
T cd05593 248 IMRHSFFTG 256 (328)
T ss_pred HhcCCCcCC
Confidence 999999854
No 57
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=1.5e-36 Score=347.87 Aligned_cols=249 Identities=24% Similarity=0.350 Sum_probs=198.2
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 889 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g 889 (1141)
+.||+|+||.||+|++ .+..+|+|+....... ...... .+.+|+.++++++||||+++++++...+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~----~~~~E~~~l~~l~hp~i~~~~~~~~~~~------- 68 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVII-AKDEVA----HTVTESRVLQNTRHPFLTALKYAFQTHD------- 68 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhHHHH----HHHHHHHHHHhCCCCCCcceeeEEecCC-------
Confidence 4799999999999987 4567888876533211 111222 3368999999999999999999988654
Q ss_pred CCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCC
Q 001143 890 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 969 (1141)
Q Consensus 890 ~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~ 969 (1141)
..|+||||+++++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 69 -------~~~lv~E~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~----- 131 (323)
T cd05595 69 -------RLCFVMEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKD----- 131 (323)
T ss_pred -------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCC-----
Confidence 34999999999999988875 3468999999999999999999999999999999999999887
Q ss_pred CCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCC
Q 001143 970 GKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPY 1049 (1141)
Q Consensus 970 ~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf 1049 (1141)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus 132 --~~~kL~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~ell~g~~Pf 195 (323)
T cd05595 132 --GHIKITDFGLCKEGISDG----------ATMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPF 195 (323)
T ss_pred --CCEEecccHHhccccCCC----------CccccccCCcCcCCcccccC----CCCCchhchhhhHHHHHHHHhCCCCC
Confidence 789999999986432111 01123468999999999876 56789999999999999999999999
Q ss_pred CCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHHH
Q 001143 1050 MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAGD 1124 (1141)
Q Consensus 1050 ~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-----Sa~E 1124 (1141)
...+.......+..... .++ ...++.+.+++.+||+.||.+|| ++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~-~~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ 247 (323)
T cd05595 196 YNQDHERLFELILMEEI-RFP---------------------------RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 247 (323)
T ss_pred CCCCHHHHHHHHhcCCC-CCC---------------------------CCCCHHHHHHHHHHccCCHHHhCCCCCCCHHH
Confidence 87766665555432211 000 13456789999999999999998 9999
Q ss_pred HHHHHHhhc
Q 001143 1125 LYEMFVART 1133 (1141)
Q Consensus 1125 lL~~L~~~~ 1133 (1141)
+++|+|+..
T Consensus 248 ~l~h~~~~~ 256 (323)
T cd05595 248 VMEHRFFLS 256 (323)
T ss_pred HHcCCCcCC
Confidence 999999864
No 58
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.8e-36 Score=347.78 Aligned_cols=257 Identities=25% Similarity=0.270 Sum_probs=197.9
Q ss_pred CceEeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 880 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~-----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~ 880 (1141)
+|++.++||+|+||.||+|+. .+..+|+|+............ ...+..|+.++.++ +||||+++++++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~----~~~~~~e~~~l~~l~~~~~i~~~~~~~~~ 76 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKT----VEHTRTERNVLEHVRQSPFLVTLHYAFQT 76 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhH----HHHHHHHHHHHHhccCCCCcccEEEEEec
Confidence 589999999999999999986 356788888643211111111 22347899999999 59999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..++||||+++|+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 77 ~~--------------~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil 137 (332)
T cd05614 77 EA--------------KLHLILDYVSGGEMFTHLYQ-----RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENIL 137 (332)
T ss_pred CC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeE
Confidence 54 34999999999999999875 346899999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||+++........ ......||+.|+|||++.+ ...++.++|||||||++|
T Consensus 138 i~~~-------~~~kl~DfG~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~ 198 (332)
T cd05614 138 LDSE-------GHVVLTDFGLSKEFLSEEKE---------RTYSFCGTIEYMAPEIIRG---KGGHGKAVDWWSLGILIF 198 (332)
T ss_pred ECCC-------CCEEEeeCcCCccccccCCC---------ccccccCCccccCHHHhcC---CCCCCCccccccchhhhh
Confidence 9887 78999999998754321111 1123468999999999875 234678999999999999
Q ss_pred HHHhCCCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1041 ELLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
||++|+.||..... ..+...+.... +.++ ...+..+.+++.+||+.||
T Consensus 199 elltg~~pf~~~~~~~~~~~~~~~~~~~~-~~~~---------------------------~~~~~~~~~li~~~l~~dp 250 (332)
T cd05614 199 ELLTGASPFTLEGERNTQSEVSRRILKCD-PPFP---------------------------SFIGPEAQDLLHKLLRKDP 250 (332)
T ss_pred hhhcCCCCCCCCCCCCCHHHHHHHHhcCC-CCCC---------------------------CCCCHHHHHHHHHHcCCCH
Confidence 99999999964321 22222222111 1110 1345678999999999999
Q ss_pred CCCC-----CHHHHHHHHHhhc
Q 001143 1117 TERP-----TAGDLYEMFVART 1133 (1141)
Q Consensus 1117 ~~RP-----Sa~ElL~~L~~~~ 1133 (1141)
++|| +++++++|+|+..
T Consensus 251 ~~R~~~~~~~~~~~l~h~~~~~ 272 (332)
T cd05614 251 KKRLGAGPQGASEIKEHPFFKG 272 (332)
T ss_pred HHcCCCCCCCHHHHHcCCCcCC
Confidence 9999 8899999999864
No 59
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.8e-36 Score=354.47 Aligned_cols=267 Identities=22% Similarity=0.271 Sum_probs=201.0
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||.||+|.+ .+..+|+|+...... ..... ...+.+|+.++++++||||+++++++.+...
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~-~~~~~----~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~ 75 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM-FKKDQ----LAHVKAERDVLAESDSPWVVSLYYSFQDAQY 75 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH-HHhHH----HHHHHHHHHHHHhCCCCCcceEEEEEEcCCe
Confidence 4789999999999999999987 456677776532211 01112 2334789999999999999999999987553
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.|+||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 76 --------------~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~ 136 (377)
T cd05629 76 --------------LYLIMEFLPGGDLMTMLIK-----YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDR 136 (377)
T ss_pred --------------eEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC
Confidence 4999999999999999875 346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccc--------cccCC-----------------------------CCCCCCcc
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCC--------IAHRG-----------------------------IPAPDVCV 1006 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~--------~~~~~-----------------------------~~~~~~~~ 1006 (1141)
+ +.+||+|||+++.+........ ..... .......+
T Consensus 137 ~-------~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (377)
T cd05629 137 G-------GHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTV 209 (377)
T ss_pred C-------CCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccC
Confidence 7 7899999999864321100000 00000 00001246
Q ss_pred CCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhccCcccccc
Q 001143 1007 GTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVA 1085 (1141)
Q Consensus 1007 GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~ 1085 (1141)
||+.|+|||++.+ ..++.++|||||||++|||++|..||.+....+....+.... ...++.
T Consensus 210 gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------- 271 (377)
T cd05629 210 GTPDYIAPEIFLQ----QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPD-------------- 271 (377)
T ss_pred CCccccCHHHHcc----CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCC--------------
Confidence 9999999999876 567899999999999999999999998777666555553211 111100
Q ss_pred ccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC---CCHHHHHHHHHhhc
Q 001143 1086 QSGSGFEKPEAELETLSFLVDVFRRCTEENPTER---PTAGDLYEMFVART 1133 (1141)
Q Consensus 1086 ~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R---PSa~ElL~~L~~~~ 1133 (1141)
....+.++.+++.+||. +|.+| +++.|++.|+|+..
T Consensus 272 -----------~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~ 310 (377)
T cd05629 272 -----------DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRG 310 (377)
T ss_pred -----------CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCC
Confidence 00345678999999997 67665 69999999999864
No 60
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.1e-37 Score=338.55 Aligned_cols=253 Identities=24% Similarity=0.341 Sum_probs=212.1
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.|-+|+. .++.||+|..+.+...+. .+. -.+.+|++||..|+||||+++|.+|+..+.
T Consensus 53 HRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkde-qDl----vhIRREIeIMSsLNHPhII~IyEVFENkdK 127 (668)
T KOG0611|consen 53 HRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDE-QDL----VHIRREIEIMSSLNHPHIIQIYEVFENKDK 127 (668)
T ss_pred hHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccH-HHH----HHHHHHHHHHhhcCCCceeehhhhhcCCce
Confidence 5799999999999999999986 466777776543332222 112 234799999999999999999999997664
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+ .|||||..+|.|+++|.. ...+++.+++.+++||.+|+.|+|.++++|||||.+|||+|.
T Consensus 128 I--------------vivMEYaS~GeLYDYiSe-----r~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~ 188 (668)
T KOG0611|consen 128 I--------------VIVMEYASGGELYDYISE-----RGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQ 188 (668)
T ss_pred E--------------EEEEEecCCccHHHHHHH-----hccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecC
Confidence 4 999999999999999987 357999999999999999999999999999999999999999
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +++||+|||++..+.... ...+++|+|.|.+||++.+. ..-++.+|.|||||+||.|.
T Consensus 189 N-------~NiKIADFGLSNly~~~k-----------fLqTFCGSPLYASPEIvNG~---PY~GPEVDsWsLGvLLYtLV 247 (668)
T KOG0611|consen 189 N-------NNIKIADFGLSNLYADKK-----------FLQTFCGSPLYASPEIVNGT---PYKGPEVDSWSLGVLLYTLV 247 (668)
T ss_pred C-------CCeeeeccchhhhhcccc-----------HHHHhcCCcccCCccccCCC---CCCCCccchhhHHHHHHHHh
Confidence 8 889999999997654322 22467899999999999872 23368999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
.|..||++.+...+..+|..+.+... ..+.+..-||+.||..+|++|.|+.
T Consensus 248 yGtMPFDG~Dhk~lvrQIs~GaYrEP-----------------------------~~PSdA~gLIRwmLmVNP~RRATie 298 (668)
T KOG0611|consen 248 YGTMPFDGRDHKRLVRQISRGAYREP-----------------------------ETPSDASGLIRWMLMVNPERRATIE 298 (668)
T ss_pred hcccccCCchHHHHHHHhhcccccCC-----------------------------CCCchHHHHHHHHHhcCcccchhHH
Confidence 99999999888888888877654322 2334577899999999999999999
Q ss_pred HHHHHHHhh
Q 001143 1124 DLYEMFVAR 1132 (1141)
Q Consensus 1124 ElL~~L~~~ 1132 (1141)
+|..|+|..
T Consensus 299 DiAsHWWvN 307 (668)
T KOG0611|consen 299 DIASHWWVN 307 (668)
T ss_pred HHhhhheee
Confidence 999999974
No 61
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1.3e-36 Score=355.06 Aligned_cols=266 Identities=22% Similarity=0.286 Sum_probs=208.5
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
....+|++.++||+|+||.||+|++. +..+|+|+....... ..... ..+.+|+.+++.++||||+++++++.+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~----~~~~~e~~il~~~~h~~iv~~~~~~~~ 114 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI-KRSDS----AFFWEERDIMAHANSEWIVQLHYAFQD 114 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhhH----HHHHHHHHHHHhCCCCCcceEEEEEec
Confidence 34678999999999999999999984 556777775321110 11111 223689999999999999999999886
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. +.++||||++||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 115 ~~--------------~~~lv~Ey~~gg~L~~~l~~------~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIL 174 (370)
T cd05596 115 DK--------------YLYMVMEYMPGGDLVNLMSN------YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNML 174 (370)
T ss_pred CC--------------EEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 55 35999999999999999875 25889999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||++........ .......||+.|+|||++.+......++.++|||||||++|
T Consensus 175 l~~~-------~~~kL~DfG~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvily 238 (370)
T cd05596 175 LDKS-------GHLKLADFGTCMKMDANGM---------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 238 (370)
T ss_pred EcCC-------CCEEEEeccceeeccCCCc---------ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHH
Confidence 9887 7899999999876432111 11124469999999999876443345789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC-
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE- 1118 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~- 1118 (1141)
||++|+.||.+.+.......+..... ..++. ....+.++.++|.+||..+|.+
T Consensus 239 elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~~s~~~~~li~~~L~~~p~r~ 293 (370)
T cd05596 239 EMLVGDTPFYADSLVGTYSKIMDHKNSLTFPD-------------------------DIEISKQAKDLICAFLTDREVRL 293 (370)
T ss_pred HHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCC-------------------------cCCCCHHHHHHHHHHccChhhcc
Confidence 99999999998776666665543221 11110 0135677999999999999988
Q ss_pred -CCCHHHHHHHHHhhcC
Q 001143 1119 -RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 -RPSa~ElL~~L~~~~~ 1134 (1141)
||++.++++|+|++..
T Consensus 294 ~R~s~~ell~h~~~~~~ 310 (370)
T cd05596 294 GRNGVDEIKSHPFFKND 310 (370)
T ss_pred CCCCHHHHhcCcccCCC
Confidence 9999999999999753
No 62
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=353.27 Aligned_cols=247 Identities=26% Similarity=0.430 Sum_probs=201.6
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+|+...-.+-||.|+.|.||+|+..+..||||..+ +.+ ..+|.-|++|+||||+.|.|++.+...
T Consensus 122 PFe~IsELeWlGSGaQGAVF~Grl~netVAVKKV~---------elk------ETdIKHLRkLkH~NII~FkGVCtqsPc 186 (904)
T KOG4721|consen 122 PFEEISELEWLGSGAQGAVFLGRLHNETVAVKKVR---------ELK------ETDIKHLRKLKHPNIITFKGVCTQSPC 186 (904)
T ss_pred CHHHhhhhhhhccCcccceeeeeccCceehhHHHh---------hhh------hhhHHHHHhccCcceeeEeeeecCCce
Confidence 34444556789999999999999999999988422 111 357888999999999999999987553
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+|||||||..|-|..+++. ..+++......|..+||.|++|||.+.|||||||.-||||..
T Consensus 187 --------------yCIiMEfCa~GqL~~VLka-----~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~ 247 (904)
T KOG4721|consen 187 --------------YCIIMEFCAQGQLYEVLKA-----GRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISY 247 (904)
T ss_pred --------------eEEeeeccccccHHHHHhc-----cCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeec
Confidence 4999999999999999986 457889999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ ..|||+|||.++....... .-.+.||..|||||++.. .+.+.|+|||||||+||||+
T Consensus 248 ~-------d~VKIsDFGTS~e~~~~ST-----------kMSFaGTVaWMAPEvIrn----ePcsEKVDIwSfGVVLWEmL 305 (904)
T KOG4721|consen 248 D-------DVVKISDFGTSKELSDKST-----------KMSFAGTVAWMAPEVIRN----EPCSEKVDIWSFGVVLWEML 305 (904)
T ss_pred c-------ceEEeccccchHhhhhhhh-----------hhhhhhhHhhhCHHHhhc----CCcccccceehhHHHHHHHH
Confidence 8 7899999999987655322 225679999999999987 67899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
||..||.+.+...++ ++...... ..+ .+..+++.+.=|++.||+-.|..||+|.
T Consensus 306 T~EiPYkdVdssAII----wGVGsNsL---------------------~Lp-vPstcP~GfklL~Kqcw~sKpRNRPSFr 359 (904)
T KOG4721|consen 306 TGEIPYKDVDSSAII----WGVGSNSL---------------------HLP-VPSTCPDGFKLLLKQCWNSKPRNRPSFR 359 (904)
T ss_pred hcCCCccccchheeE----EeccCCcc---------------------ccc-CcccCchHHHHHHHHHHhcCCCCCccHH
Confidence 999999865443322 22211110 001 1126788899999999999999999999
Q ss_pred HHHHHHHhh
Q 001143 1124 DLYEMFVAR 1132 (1141)
Q Consensus 1124 ElL~~L~~~ 1132 (1141)
+|+.|+...
T Consensus 360 qil~HldIa 368 (904)
T KOG4721|consen 360 QILLHLDIA 368 (904)
T ss_pred HHHHHHhhc
Confidence 999998654
No 63
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=1.3e-36 Score=350.80 Aligned_cols=267 Identities=24% Similarity=0.315 Sum_probs=206.8
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||+||+|++. +..+|+|+........ .... ..+..|+.++..++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~-~~~~----~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIK-RNQI----AHVRAERDILADADSPWIVKLYYSFQDEE- 74 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhh-ccHH----HHHHHHHHHHHhcCCCCccchhhheecCC-
Confidence 46999999999999999999986 6778888865332111 1112 23478999999999999999999987655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+.++||||+++++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~ 136 (350)
T cd05573 75 -------------HLYLVMEYMPGGDLMNLLIR-----KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDA 136 (350)
T ss_pred -------------eEEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC
Confidence 34999999999999999976 246999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecccccccccccccccc-------------------ccCCCCCCCCccCCCcccchhhhccccCCC
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCI-------------------AHRGIPAPDVCVGTPRWMAPEVLRAMHKPN 1024 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~-------------------~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 1024 (1141)
+ +.+||+|||++............ ............||+.|+|||++.+ .
T Consensus 137 ~-------~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~ 205 (350)
T cd05573 137 D-------GHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRG----T 205 (350)
T ss_pred C-------CCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcC----C
Confidence 7 78999999999765432200000 0000011234569999999999986 4
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhccCccccccccCCCCCCchhhhhhHHH
Q 001143 1025 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1103 (1141)
Q Consensus 1025 ~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1141)
.++.++|||||||++|+|++|+.||......+....+.... ....+ . ....++.
T Consensus 206 ~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p------------------------~-~~~~~~~ 260 (350)
T cd05573 206 PYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFP------------------------P-DPPVSPE 260 (350)
T ss_pred CCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCC------------------------C-CCCCCHH
Confidence 68899999999999999999999998877665555543311 00000 0 0024667
Q ss_pred HHHHHHHhcccCCCCCCC-HHHHHHHHHhhc
Q 001143 1104 LVDVFRRCTEENPTERPT-AGDLYEMFVART 1133 (1141)
Q Consensus 1104 L~dLI~~cL~~DP~~RPS-a~ElL~~L~~~~ 1133 (1141)
+.++|.+||. ||.+||+ +.++++|+|+..
T Consensus 261 ~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~ 290 (350)
T cd05573 261 AIDLICRLLC-DPEDRLGSFEEIKSHPFFKG 290 (350)
T ss_pred HHHHHHHHcc-ChhhcCCCHHHHhcCCCcCC
Confidence 9999999997 9999999 999999999864
No 64
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=8.6e-36 Score=360.80 Aligned_cols=269 Identities=25% Similarity=0.331 Sum_probs=211.4
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
-.+|++.++||+|+||+||+|++ .+..+|+|+.... ......... +.+|+.++..++|+||+++++.+....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~--~~~~~~~~~----~~~Ei~~l~~~~h~~iv~~~~~~~~~~ 104 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDME--GMSEADKNR----AQAEVCCLLNCDFFSIVKCHEDFAKKD 104 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecc--cCCHHHHHH----HHHHHHHHhcCCCCcEEEeecceeccc
Confidence 45899999999999999999987 4677888876543 222333333 378999999999999999988776432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ........++||||+++|+|.++++.... ....+++..+..++.|++.||.|||++||+||||||+|||++
T Consensus 105 ~~------~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~-~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~ 177 (496)
T PTZ00283 105 PR------NPENVLMIALVLDYANAGDLRQEIKSRAK-TNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC 177 (496)
T ss_pred cc------CcccceEEEEEEeCCCCCcHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe
Confidence 11 11122346899999999999999975332 234799999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++.+...... .......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 178 ~~-------~~vkL~DFGls~~~~~~~~~--------~~~~~~~Gt~~Y~aPE~~~~----~~~s~k~DVwSlGvilyeL 238 (496)
T PTZ00283 178 SN-------GLVKLGDFGFSKMYAATVSD--------DVGRTFCGTPYYVAPEIWRR----KPYSKKADMFSLGVLLYEL 238 (496)
T ss_pred CC-------CCEEEEecccCeeccccccc--------cccccccCCcceeCHHHhCC----CCCCcHHHHHHHHHHHHHH
Confidence 87 78999999999765432111 11224569999999999976 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||.+.+..++...+..+....++ ...++++.+++.+||+.||.+||++
T Consensus 239 ltG~~Pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~L~~dP~~RPs~ 291 (496)
T PTZ00283 239 LTLKRPFDGENMEEVMHKTLAGRYDPLP---------------------------PSISPEMQEIVTALLSSDPKRRPSS 291 (496)
T ss_pred HHCCCCCCCCCHHHHHHHHhcCCCCCCC---------------------------CCCCHHHHHHHHHHcccChhhCcCH
Confidence 9999999887776666665444332211 1445679999999999999999999
Q ss_pred HHHHHHHHhh
Q 001143 1123 GDLYEMFVAR 1132 (1141)
Q Consensus 1123 ~ElL~~L~~~ 1132 (1141)
.++++|+|++
T Consensus 292 ~ell~~p~~~ 301 (496)
T PTZ00283 292 SKLLNMPICK 301 (496)
T ss_pred HHHHhCHHHH
Confidence 9999998865
No 65
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.5e-36 Score=355.87 Aligned_cols=278 Identities=23% Similarity=0.268 Sum_probs=212.7
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C-----CCccceeeeE
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H-----SCIVEMYGHK 878 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H-----pNIVkllg~~ 878 (1141)
+|++.+.||+|+||.|-+|.+. +..||+||.+-+. .|-++...|+.+|..|+ | -|+|+++++|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k---------~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F 257 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK---------RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYF 257 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh---------HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecc
Confidence 7899999999999999999984 5678888755332 22233368999999996 4 3899999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
...++ .|||+|++. .+|+++++. +....++...++.|+.||+.||.+||+.||||+||||+|
T Consensus 258 ~fr~H--------------lciVfELL~-~NLYellK~---n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPEN 319 (586)
T KOG0667|consen 258 YFRNH--------------LCIVFELLS-TNLYELLKN---NKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPEN 319 (586)
T ss_pred ccccc--------------eeeeehhhh-hhHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhh
Confidence 87665 499999996 899999987 556679999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||+....+ ..|||+|||.|........ ..+.+..|+|||++.| .+|+.++||||||||
T Consensus 320 ILL~~~~r-----~~vKVIDFGSSc~~~q~vy-------------tYiQSRfYRAPEVILG----lpY~~~IDmWSLGCI 377 (586)
T KOG0667|consen 320 ILLKDPKR-----SRIKVIDFGSSCFESQRVY-------------TYIQSRFYRAPEVILG----LPYDTAIDMWSLGCI 377 (586)
T ss_pred eeeccCCc-----CceeEEecccccccCCcce-------------eeeeccccccchhhcc----CCCCCccceeehhhh
Confidence 99976533 6899999999976544221 3457889999999998 789999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC---ccc--cccc-----c-----------------CCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---HEH--EVAQ-----S-----------------GSGF 1091 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---~~~--~~~~-----~-----------------~~~~ 1091 (1141)
++||++|.+.|.+.++.+.+..|......+....++..... ... ...+ . ....
T Consensus 378 lAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 457 (586)
T KOG0667|consen 378 LAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLER 457 (586)
T ss_pred HHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccc
Confidence 99999999999999988877766333222222222221110 000 0000 0 0000
Q ss_pred CCc--------hhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1092 EKP--------EAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1092 ~~~--------~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
..| .........+.+++.+||.+||.+|+|+.|+++|+|+..
T Consensus 458 ~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~ 507 (586)
T KOG0667|consen 458 RGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTG 507 (586)
T ss_pred cCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccc
Confidence 011 011244567899999999999999999999999999984
No 66
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=3.3e-36 Score=344.84 Aligned_cols=252 Identities=27% Similarity=0.363 Sum_probs=198.9
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHH---hhCCCCCccceeeeEecCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRML---GALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL---~~L~HpNIVkllg~~~~~~ 882 (1141)
|++.+.||+|+||.||+|.+. +..+|+|+.+..... .....+ .+.+|+.++ ..++||||+++++++....
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~----~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~ 75 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDII-ARDEVE----SLMCEKRIFETANSERHPFLVNLFACFQTED 75 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHH----HHHHHHHHHHhccccCCCChhceeeEEEcCC
Confidence 788999999999999999984 567888876432111 111122 235666555 5667999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
+.|+||||+++++|..+++. ..+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 76 --------------~~~lv~E~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~ 135 (324)
T cd05589 76 --------------HVCFVMEYAAGGDLMMHIHT------DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD 135 (324)
T ss_pred --------------EEEEEEcCCCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC
Confidence 45999999999999988754 3699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 136 ~~-------~~~kL~Dfg~~~~~~~~~----------~~~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslG~il~el 194 (324)
T cd05589 136 TE-------GFVKIADFGLCKEGMGFG----------DRTSTFCGTPEFLAPEVLTE----TSYTRAVDWWGLGVLIYEM 194 (324)
T ss_pred CC-------CcEEeCcccCCccCCCCC----------CcccccccCccccCHhHhcC----CCCCcccchhhHHHHHHHH
Confidence 87 789999999986432211 11124568999999999876 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC--
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-- 1120 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-- 1120 (1141)
++|+.||.+.+..+....+...... .+ ...+..+.+++.+||+.||.+||
T Consensus 195 ~~G~~pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~~ 246 (324)
T cd05589 195 LVGESPFPGDDEEEVFDSIVNDEVR-YP---------------------------RFLSREAISIMRRLLRRNPERRLGS 246 (324)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHhHcCCC
Confidence 9999999987777666665443221 10 13456689999999999999999
Q ss_pred ---CHHHHHHHHHhhc
Q 001143 1121 ---TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 ---Sa~ElL~~L~~~~ 1133 (1141)
++.++++|+|+..
T Consensus 247 ~~~~~~~l~~~~~f~~ 262 (324)
T cd05589 247 GEKDAEDVKKQPFFRD 262 (324)
T ss_pred CCCCHHHHhhCCCcCC
Confidence 7999999998864
No 67
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.6e-36 Score=345.34 Aligned_cols=249 Identities=27% Similarity=0.364 Sum_probs=198.0
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
+.||+|+||.||+|++. +..+|+|+....... .....+ .+..|..++..+ +||||+++++++....
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~----~~~~e~~~l~~~~~h~~iv~~~~~~~~~~------ 69 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVIL-QDDDVE----CTMTEKRILSLARNHPFLTQLYCCFQTPD------ 69 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHh-hccHHH----HHHHHHHHHHhccCCCchhceeeEEEcCC------
Confidence 47999999999999984 556888875432111 111122 236788888877 6999999999987654
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..|+||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~iv~Ey~~~g~L~~~i~~-----~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~---- 132 (320)
T cd05590 70 --------RLFFVMEFVNGGDLMFHIQK-----SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHE---- 132 (320)
T ss_pred --------EEEEEEcCCCCchHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC----
Confidence 34999999999999999876 3469999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~DfG~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~P 195 (320)
T cd05590 133 ---GHCKLADFGMCKEGIFNG----------KTTSTFCGTPDYIAPEILQE----MLYGPSVDWWAMGVLLYEMLCGHAP 195 (320)
T ss_pred ---CcEEEeeCCCCeecCcCC----------CcccccccCccccCHHHHcC----CCCCCccchhhhHHHHHHHhhCCCC
Confidence 789999999986432111 11223468999999999876 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH------
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA------ 1122 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa------ 1122 (1141)
|.+.+..++...+....... + ...+.++.+++.+||+.||.+||++
T Consensus 196 f~~~~~~~~~~~i~~~~~~~-~---------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~ 247 (320)
T cd05590 196 FEAENEDDLFEAILNDEVVY-P---------------------------TWLSQDAVDILKAFMTKNPTMRLGSLTLGGE 247 (320)
T ss_pred CCCCCHHHHHHHHhcCCCCC-C---------------------------CCCCHHHHHHHHHHcccCHHHCCCCCCCCCH
Confidence 99877777766664432110 0 0345578999999999999999998
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
+++++|+|+..
T Consensus 248 ~~~~~h~~f~~ 258 (320)
T cd05590 248 EAILRHPFFKE 258 (320)
T ss_pred HHHHcCCCcCC
Confidence 99999999864
No 68
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=334.05 Aligned_cols=252 Identities=20% Similarity=0.257 Sum_probs=199.8
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
..||+|++|.||+|.+++..||+|...... ... +.+...+.+|+.+|++++||||+++++++.+..
T Consensus 26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~--~~~---~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~--------- 91 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFH--KGH---KVLIDITENEIKNLRRIDSNNILKIYGFIIDIV--------- 91 (283)
T ss_pred eEEeeCCceEEEEEEECCEEEEEEeccccc--ccc---HHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc---------
Confidence 679999999999999999999999854321 111 112233479999999999999999999987511
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCCeeeecccccCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENILIDLERKKADG 970 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~NILld~~~~~~~~ 970 (1141)
......++||||+++|+|.+++.. ...+++.....++.|++.||.|||+. +++||||||+||+++.+
T Consensus 92 -~~~~~~~lv~Ey~~~g~L~~~l~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~------ 159 (283)
T PHA02988 92 -DDLPRLSLILEYCTRGYLREVLDK-----EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTEN------ 159 (283)
T ss_pred -cCCCceEEEEEeCCCCcHHHHHhh-----CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCC------
Confidence 011246999999999999999975 24689999999999999999999984 99999999999999987
Q ss_pred CCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 001143 971 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYM 1050 (1141)
Q Consensus 971 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~ 1050 (1141)
+.+||+|||+++...... ....|+..|+|||++.+. ...++.++|||||||++|||++|+.||.
T Consensus 160 -~~~kl~dfg~~~~~~~~~-------------~~~~~~~~y~aPE~~~~~--~~~~~~k~Di~SlGvil~el~~g~~Pf~ 223 (283)
T PHA02988 160 -YKLKIICHGLEKILSSPP-------------FKNVNFMVYFSYKMLNDI--FSEYTIKDDIYSLGVVLWEIFTGKIPFE 223 (283)
T ss_pred -CcEEEcccchHhhhcccc-------------ccccCcccccCHHHhhhc--cccccchhhhhHHHHHHHHHHHCCCCCC
Confidence 789999999987543211 123588999999998652 1467899999999999999999999999
Q ss_pred CCCHHHHHHHHHhC-CCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 001143 1051 GLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF 1129 (1141)
Q Consensus 1051 ~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L 1129 (1141)
+.+..++...+... ..+..+ ..++..+.+++.+||+.||.+|||+.|+++.+
T Consensus 224 ~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l 276 (283)
T PHA02988 224 NLTTKEIYDLIINKNNSLKLP---------------------------LDCPLEIKCIVEACTSHDSIKRPNIKEILYNL 276 (283)
T ss_pred CCCHHHHHHHHHhcCCCCCCC---------------------------CcCcHHHHHHHHHHhcCCcccCcCHHHHHHHH
Confidence 87777766665322 221111 14566799999999999999999999999987
Q ss_pred Hhh
Q 001143 1130 VAR 1132 (1141)
Q Consensus 1130 ~~~ 1132 (1141)
..-
T Consensus 277 ~~~ 279 (283)
T PHA02988 277 SLY 279 (283)
T ss_pred HHH
Confidence 543
No 69
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=4.4e-36 Score=343.78 Aligned_cols=254 Identities=25% Similarity=0.323 Sum_probs=200.8
Q ss_pred CceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC-CCccceeeeEecCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH-SCIVEMYGHKISSKW 883 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H-pNIVkllg~~~~~~~ 883 (1141)
+|++.+.||+|+||.||+|++.+ ..+|+|+....... .....+ .+..|+.++..+.| ++|+++++++...+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~~----~~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVII-QDDDVE----CTMVEKRVLALPGKPPFLTQLHSCFQTMD- 74 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHH----HHHHHHHHHHhcCCCCceeeeEEEEEcCC-
Confidence 58999999999999999999854 46888876533211 112222 23689999999975 56888888887654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..|+||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~ 136 (324)
T cd05587 75 -------------RLYFVMEYVNGGDLMYHIQQ-----VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDA 136 (324)
T ss_pred -------------EEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcC
Confidence 35999999999999999875 346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 137 ~-------~~~kL~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~ell 195 (324)
T cd05587 137 E-------GHIKIADFGMCKENIFGGK----------TTRTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVLLYEML 195 (324)
T ss_pred C-------CCEEEeecCcceecCCCCC----------ceeeecCCccccChhhhcC----CCCCcccchhhhHHHHHHHH
Confidence 7 7899999999864321110 1123468999999999976 56789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH-
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA- 1122 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa- 1122 (1141)
+|+.||.+.+..+....+..... .++ ...+..+.+++.+||..||.+|+++
T Consensus 196 tG~~pf~~~~~~~~~~~i~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~~P~~R~~~~ 247 (324)
T cd05587 196 AGQPPFDGEDEDELFQSIMEHNV-SYP---------------------------KSLSKEAVSICKGLLTKHPAKRLGCG 247 (324)
T ss_pred hCCCCCCCCCHHHHHHHHHcCCC-CCC---------------------------CCCCHHHHHHHHHHhhcCHHHcCCCC
Confidence 99999998777766666543221 111 0345568999999999999999976
Q ss_pred ----HHHHHHHHhhc
Q 001143 1123 ----GDLYEMFVART 1133 (1141)
Q Consensus 1123 ----~ElL~~L~~~~ 1133 (1141)
.++++|+|+..
T Consensus 248 ~~~~~~~~~hp~~~~ 262 (324)
T cd05587 248 PTGERDIREHAFFRR 262 (324)
T ss_pred CCCHHHHhcCCCcCC
Confidence 89999998864
No 70
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.3e-35 Score=345.46 Aligned_cols=285 Identities=17% Similarity=0.210 Sum_probs=205.3
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+|++.+.||+|+||.||+|.+. +..+|+|+.... ......... +.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~~ii~~~~~~~~~ 95 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP--FQNQTHAKR----AYRELVLMKCVNHKNIIGLLNVFTPQ 95 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcc--ccCchhHHH----HHHHHHHHHhcCCCCccccceeeccc
Confidence 3578999999999999999999974 556777764322 222222233 36899999999999999999988654
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
... ......|+||||++ ++|.+.+.. .+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 96 ~~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll 159 (364)
T cd07875 96 KSL--------EEFQDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159 (364)
T ss_pred ccc--------cccCeEEEEEeCCC-CCHHHHHHh-------cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE
Confidence 321 12235699999997 678887754 48889999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 160 ~~~-------~~~kL~DfG~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwSlG~il~e 217 (364)
T cd07875 160 KSD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGE 217 (364)
T ss_pred CCC-------CcEEEEeCCCccccCCCC-----------cccCCcccCCcCCHHHHhC----CCCCchhhHHhHHHHHHH
Confidence 887 789999999997543211 1123468999999999976 567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC-----------ccccccccCCCCC---CchhhhhhHHHHHHH
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-----------HEHEVAQSGSGFE---KPEAELETLSFLVDV 1107 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-----------~~~~~~~~~~~~~---~~~~~~~~~~~L~dL 1107 (1141)
|++|+.||.+.+..+....+........+......... ......+...... ...........++++
T Consensus 218 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 297 (364)
T cd07875 218 MIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDL 297 (364)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHH
Confidence 99999999987776665555332222222111111000 0000000000000 000111234578999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
|.+||+.||.+|||+.|+++|+|+.
T Consensus 298 l~~mL~~dP~~R~t~~e~L~hp~~~ 322 (364)
T cd07875 298 LSKMLVIDASKRISVDEALQHPYIN 322 (364)
T ss_pred HHHhcCcCcccCCCHHHHhcCcccc
Confidence 9999999999999999999999985
No 71
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.1e-35 Score=345.23 Aligned_cols=284 Identities=18% Similarity=0.224 Sum_probs=202.1
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+|++.+.||+|+||.||+|.+. +..+|+|+.... ......... +.+|+.+++.++||||+++++++...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~ 92 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP--FQNQTHAKR----AYRELVLLKCVNHKNIISLLNVFTPQ 92 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccc--ccchhHHHH----HHHHHHHHHhCCCCCEeeeeeeeccC
Confidence 4678999999999999999999874 566777765322 222222223 37899999999999999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
... ......|+||||++ ++|...+.. .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 93 ~~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~ 156 (359)
T cd07876 93 KSL--------EEFQDVYLVMELMD-ANLCQVIHM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 156 (359)
T ss_pred CCc--------cccceeEEEEeCCC-cCHHHHHhc-------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence 322 12235699999997 567776643 48889999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 157 ~~~-------~~~kl~Dfg~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwSlG~il~e 214 (359)
T cd07876 157 KSD-------CTLKILDFGLARTACTNF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGE 214 (359)
T ss_pred CCC-------CCEEEecCCCccccccCc-----------cCCCCcccCCCCCchhccC----CCCCcchhhHHHHHHHHH
Confidence 887 789999999986532211 1123468999999999876 567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhc-----------cCccccccccCCCCCC---chhhhhhHHHHHH
Q 001143 1042 LLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALG-----------SCHEHEVAQSGSGFEK---PEAELETLSFLVD 1106 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~-----------~~~~~~~~~~~~~~~~---~~~~~~~~~~L~d 1106 (1141)
|++|+.||.+.+..+....+ .....+... ...... ........+....+.. .......+..+++
T Consensus 215 l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (359)
T cd07876 215 LVKGSVIFQGTDHIDQWNKVIEQLGTPSAE-FMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARD 293 (359)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCcHH-HHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHH
Confidence 99999999876655443333 222222111 000000 0000000000000000 0011123567899
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1107 VFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1107 LI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
|+.+||+.||++|||+.|+++|+|+.
T Consensus 294 li~~mL~~dP~~R~t~~e~l~hp~~~ 319 (359)
T cd07876 294 LLSKMLVIDPDKRISVDEALRHPYIT 319 (359)
T ss_pred HHHHHhccCcccCCCHHHHhcCchhh
Confidence 99999999999999999999999986
No 72
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=4.1e-36 Score=352.11 Aligned_cols=267 Identities=22% Similarity=0.280 Sum_probs=199.5
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|++.++||+|+||+||+|++. +..+|+|+...... ...... ..+.+|+.++++++||||+++++++.+.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~----~~~~~E~~il~~l~h~~iv~l~~~~~~~~-- 74 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV-LNRNQV----AHVKAERDILAEADNEWVVKLYYSFQDKD-- 74 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh-hhhHHH----HHHHHHHHHHHhcCCCCeeeeEEEEecCC--
Confidence 5899999999999999999984 45677777543211 111122 23489999999999999999999998655
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
+.++||||++||+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 75 ------------~~~lv~E~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~ 137 (381)
T cd05626 75 ------------NLYFVMDYIPGGDMMSLLIR-----MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLD 137 (381)
T ss_pred ------------EEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCC
Confidence 35999999999999999876 3468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccc-------------------------------------cCCCCCCCCccC
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-------------------------------------HRGIPAPDVCVG 1007 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-------------------------------------~~~~~~~~~~~G 1007 (1141)
+.+||+|||++..+.......... ..........+|
T Consensus 138 -------~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 210 (381)
T cd05626 138 -------GHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVG 210 (381)
T ss_pred -------CCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccC
Confidence 789999999986432110000000 000001123579
Q ss_pred CCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccc
Q 001143 1008 TPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQ 1086 (1141)
Q Consensus 1008 T~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~ 1086 (1141)
|+.|+|||++.+ ..++.++|||||||++|||++|+.||......+....+.. ......+.
T Consensus 211 t~~Y~aPE~~~~----~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~--------------- 271 (381)
T cd05626 211 TPNYIAPEVLLR----KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPP--------------- 271 (381)
T ss_pred CccccCHHHHcC----CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCC---------------
Confidence 999999999876 5678999999999999999999999987665554444322 11111110
Q ss_pred cCCCCCCchhhhhhHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHhhc
Q 001143 1087 SGSGFEKPEAELETLSFLVDVFRRCT--EENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1087 ~~~~~~~~~~~~~~~~~L~dLI~~cL--~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
....++++.+++.+|+ ..+|..||++.++++|+|+..
T Consensus 272 ----------~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~ 310 (381)
T cd05626 272 ----------QVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSE 310 (381)
T ss_pred ----------CCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCC
Confidence 0134567889998855 556666999999999999864
No 73
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=9.5e-36 Score=345.19 Aligned_cols=284 Identities=17% Similarity=0.218 Sum_probs=202.5
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+|++.+.||+|+||.||+|.+. +..+|+|+.. ........... +.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~ 88 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS--RPFQNQTHAKR----AYRELVLMKCVNHKNIISLLNVFTPQ 88 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeC--CcccChHHHHH----HHHHHHHHHHhCCCchhceeeeeecc
Confidence 4678999999999999999999874 5566776543 22222222233 36899999999999999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
... ......++||||++ ++|...+.. .+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 89 ~~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill 152 (355)
T cd07874 89 KSL--------EEFQDVYLVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152 (355)
T ss_pred ccc--------cccceeEEEhhhhc-ccHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE
Confidence 321 12235699999997 577777654 48899999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 153 ~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwslG~il~e 210 (355)
T cd07874 153 KSD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGE 210 (355)
T ss_pred CCC-------CCEEEeeCcccccCCCcc-----------ccCCccccCCccCHHHHcC----CCCCchhhHHHHHHHHHH
Confidence 887 789999999997543211 1123468999999999876 567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC----cc-----------ccccccCCCCCCchhhhhhHHHHHH
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC----HE-----------HEVAQSGSGFEKPEAELETLSFLVD 1106 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~----~~-----------~~~~~~~~~~~~~~~~~~~~~~L~d 1106 (1141)
|++|+.||.+.+..+....+........+......... .. ....+...+. ........+..+++
T Consensus 211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 289 (355)
T cd07874 211 MVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPA-DSEHNKLKASQARD 289 (355)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccccc-ccccccccchHHHH
Confidence 99999999887665544333221111111111000000 00 0000000000 00011123567899
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1107 VFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1107 LI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
||.+||+.||++|||+.|+++|+|+.
T Consensus 290 li~~mL~~dP~~Rps~~ell~hp~~~ 315 (355)
T cd07874 290 LLSKMLVIDPAKRISVDEALQHPYIN 315 (355)
T ss_pred HHHHHhcCCchhcCCHHHHhcCcchh
Confidence 99999999999999999999999986
No 74
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=3.7e-36 Score=344.00 Aligned_cols=249 Identities=24% Similarity=0.325 Sum_probs=198.3
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
++||+|+||.||+|++. +..+|+|+....... .....+ .+..|.+++..+ +||||+++++++.....
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~----~~~~e~~il~~~~~hp~i~~~~~~~~~~~~----- 70 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVIL-QDDDVD----CTMTEKRILALAAKHPFLTALHCCFQTKDR----- 70 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhh-hhhHHH----HHHHHHHHHHhccCCCCccceeeEEEcCCe-----
Confidence 46999999999999985 456888876533211 112222 236788888876 79999999999986553
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
.|+||||+++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 71 ---------~~lv~E~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~---- 132 (321)
T cd05591 71 ---------LFFVMEYVNGGDLMFQIQR-----SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAE---- 132 (321)
T ss_pred ---------EEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCC----
Confidence 4999999999999999875 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~el~tg~~P 195 (321)
T cd05591 133 ---GHCKLADFGMCKEGILNG----------VTTTTFCGTPDYIAPEILQE----LEYGPSVDWWALGVLMYEMMAGQPP 195 (321)
T ss_pred ---CCEEEeecccceecccCC----------ccccccccCccccCHHHHcC----CCCCCccceechhHHHHHHhcCCCC
Confidence 789999999986532211 01123468999999999876 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-------C
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-------T 1121 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-------S 1121 (1141)
|...+..+....+....... + ...+.++.+++.+||+.||++|| +
T Consensus 196 f~~~~~~~~~~~i~~~~~~~-p---------------------------~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~ 247 (321)
T cd05591 196 FEADNEDDLFESILHDDVLY-P---------------------------VWLSKEAVSILKAFMTKNPNKRLGCVASQGG 247 (321)
T ss_pred CCCCCHHHHHHHHHcCCCCC-C---------------------------CCCCHHHHHHHHHHhccCHHHcCCCCCCCCC
Confidence 99888777776664432110 0 02345689999999999999999 9
Q ss_pred HHHHHHHHHhhc
Q 001143 1122 AGDLYEMFVART 1133 (1141)
Q Consensus 1122 a~ElL~~L~~~~ 1133 (1141)
+.++++|+|+..
T Consensus 248 ~~~~~~hp~~~~ 259 (321)
T cd05591 248 EDAIKQHPFFKE 259 (321)
T ss_pred HHHHhcCCccCC
Confidence 999999999854
No 75
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.4e-35 Score=357.95 Aligned_cols=258 Identities=26% Similarity=0.367 Sum_probs=205.3
Q ss_pred CCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~---~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..|.+.+.||+|++|.||+|... +..+++|..... ....... +.+|+.+++.++|||||++++++...+
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~----~~~~~~~----~~~E~~~l~~l~Hpniv~~~~~~~~~~ 138 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN----DERQAAY----ARSELHCLAACDHFGIVKHFDDFKSDD 138 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC----CHHHHHH----HHHHHHHHHhCCCCCEeEEEEEEEECC
Confidence 34999999999999999999874 344555543211 2222222 378999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
+.|+||||++||+|.+++++... ...++++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 139 --------------~~~lv~E~~~gg~L~~~l~~~~~-~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~ 203 (478)
T PTZ00267 139 --------------KLLLIMEYGSGGDLNKQIKQRLK-EHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM 203 (478)
T ss_pred --------------EEEEEEECCCCCCHHHHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC
Confidence 35999999999999999875322 234689999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++.+...... .......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 204 ~~-------~~~kL~DFgla~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~~l~el 264 (478)
T PTZ00267 204 PT-------GIIKLGDFGFSKQYSDSVSL--------DVASSFCGTPYYLAPELWER----KRYSKKADMWSLGVILYEL 264 (478)
T ss_pred CC-------CcEEEEeCcCceecCCcccc--------ccccccCCCccccCHhHhCC----CCCCcHHhHHHHHHHHHHH
Confidence 87 78999999999765432110 11224569999999999876 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||.+.+..++...+..+..+..+. ..+..+.++|.+||..||++||++
T Consensus 265 ~tg~~Pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~s~~~~~li~~~L~~dP~~Rps~ 317 (478)
T PTZ00267 265 LTLHRPFKGPSQREIMQQVLYGKYDPFPC---------------------------PVSSGMKALLDPLLSKNPALRPTT 317 (478)
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCCc---------------------------cCCHHHHHHHHHHhccChhhCcCH
Confidence 99999998877777666665443322111 345679999999999999999999
Q ss_pred HHHHHHHHhh
Q 001143 1123 GDLYEMFVAR 1132 (1141)
Q Consensus 1123 ~ElL~~L~~~ 1132 (1141)
.+++.+.|..
T Consensus 318 ~~~l~~~~~~ 327 (478)
T PTZ00267 318 QQLLHTEFLK 327 (478)
T ss_pred HHHHhCHHHH
Confidence 9999987764
No 76
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-37 Score=351.41 Aligned_cols=260 Identities=28% Similarity=0.452 Sum_probs=217.1
Q ss_pred ceEeeeecccCceEEEEEEECCccE--EEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSADA--AAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~~v--AvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|.|+..||.|+||.||+|..+.+.+ |.|+ ++. ....+.++| +-||.||..+.||+||++++.|+.++.
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKv--Iet--kseEELEDy----lVEIeILa~CdHP~ivkLl~ayy~enk-- 103 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKV--IET--KSEEELEDY----LVEIEILAECDHPVIVKLLSAYYFENK-- 103 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhh--hcc--cchhHHhhh----hhhhhhhhcCCChHHHHHHHHHhccCc--
Confidence 6899999999999999999865543 4444 332 234556666 789999999999999999998876554
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
++|+.|||.||-....+-.. ...+++.++..+.+|++.||.|||+++|||||||+.|||++-+
T Consensus 104 ------------LwiliEFC~GGAVDaimlEL----~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~Tld- 166 (1187)
T KOG0579|consen 104 ------------LWILIEFCGGGAVDAIMLEL----GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLD- 166 (1187)
T ss_pred ------------eEEEEeecCCchHhHHHHHh----ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEec-
Confidence 49999999999999888653 4579999999999999999999999999999999999999988
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHHHHh
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
|.++|+|||.+...... ....+.+.|||+|||||+..... ...+|+.++||||||++|.||..
T Consensus 167 ------GdirLADFGVSAKn~~t----------~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAq 230 (1187)
T KOG0579|consen 167 ------GDIRLADFGVSAKNKST----------RQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQ 230 (1187)
T ss_pred ------CcEeeecccccccchhH----------HhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhc
Confidence 89999999987543321 12345788999999999986542 45789999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
+.+|....+++.++-.|....+|.+... ...+..+.+|+.+||..||..||++++
T Consensus 231 iEPPHhelnpMRVllKiaKSePPTLlqP-------------------------S~Ws~~F~DfLk~cL~Knp~~Rp~aaq 285 (1187)
T KOG0579|consen 231 IEPPHHELNPMRVLLKIAKSEPPTLLQP-------------------------SHWSRSFSDFLKRCLVKNPRNRPPAAQ 285 (1187)
T ss_pred cCCCccccchHHHHHHHhhcCCCcccCc-------------------------chhhhHHHHHHHHHHhcCCccCCCHHH
Confidence 9999999999888888877776655431 145567999999999999999999999
Q ss_pred HHHHHHhhcCC
Q 001143 1125 LYEMFVARTSS 1135 (1141)
Q Consensus 1125 lL~~L~~~~~s 1135 (1141)
+++|+|+....
T Consensus 286 ll~Hpfv~~~~ 296 (1187)
T KOG0579|consen 286 LLKHPFVQNAP 296 (1187)
T ss_pred HhhCcccccCC
Confidence 99999998543
No 77
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.5e-35 Score=331.10 Aligned_cols=260 Identities=22% Similarity=0.359 Sum_probs=204.2
Q ss_pred CCCCceEeeeecccCceEEEEEEECCc-------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGSA-------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~~-------~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
++++|++.+.||+|+||.||+|.+... .+++|..+ .. ....... .+.+|+.++.+++||||+++++
T Consensus 3 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~--~~-~~~~~~~----~~~~ei~~l~~l~h~~i~~~~~ 75 (283)
T cd05048 3 PLSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLK--EN-AEPKVQQ----EFRQEAELMSDLQHPNIVCLLG 75 (283)
T ss_pred ChHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecc--cC-CCHHHHH----HHHHHHHHHHhcCCcccceEEE
Confidence 456899999999999999999987433 35566532 21 1122222 3489999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCC-----------CCCCHHHHHHHHHHHHHHHHHHH
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGE-----------KHVSVKLALFIAQDVAAALVELH 945 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~-----------~~Ls~~~i~~Ia~QIa~gL~yLH 945 (1141)
++..... .+++|||+++++|.+++........ ..+++..+..++.||+.||.|||
T Consensus 76 ~~~~~~~--------------~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH 141 (283)
T cd05048 76 VCTKEQP--------------TCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS 141 (283)
T ss_pred EEcCCCc--------------eEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9876543 4999999999999999976322111 46889999999999999999999
Q ss_pred HCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001143 946 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1025 (1141)
Q Consensus 946 s~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1025 (1141)
++||+||||||+||+++.+ +.++|+|||++......... .......+++.|+|||.+.+ ..
T Consensus 142 ~~~i~H~dlkp~Nil~~~~-------~~~~L~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~ 202 (283)
T cd05048 142 SHHFVHRDLAARNCLVGEG-------LTVKISDFGLSRDIYSADYY--------RVQSKSLLPVRWMPPEAILY----GK 202 (283)
T ss_pred hCCeeccccccceEEEcCC-------CcEEECCCcceeeccccccc--------cccCCCcccccccCHHHhcc----Cc
Confidence 9999999999999999887 78999999998754321110 01123346788999999875 56
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHH
Q 001143 1026 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1104 (1141)
Q Consensus 1026 ~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1104 (1141)
++.++|||||||++|||++ |..||.+....++...+.....+..+ ..++.++
T Consensus 203 ~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~ 255 (283)
T cd05048 203 FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCP---------------------------EDCPARV 255 (283)
T ss_pred CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCc---------------------------ccCCHHH
Confidence 7899999999999999998 99999887777777666544332211 1556789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHH
Q 001143 1105 VDVFRRCTEENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1105 ~dLI~~cL~~DP~~RPSa~ElL~~L~ 1130 (1141)
.+|+.+||+.||.+||++.||++++.
T Consensus 256 ~~l~~~c~~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05048 256 YALMIECWNEIPARRPRFKDIHTRLR 281 (283)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHh
Confidence 99999999999999999999999885
No 78
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-36 Score=347.15 Aligned_cols=262 Identities=28% Similarity=0.360 Sum_probs=215.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~ 882 (1141)
..|++.+.||+|.||.||+++.. +..+|+|+......... ..... +.+|+.+|+++. |||||.+++.|++..
T Consensus 35 ~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~-~~~~~----v~~Ev~il~~l~~hpniv~l~~~~e~~~ 109 (382)
T KOG0032|consen 35 EKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGK-EDRED----VRREVAILQQLSGHPNIVQLKDAFEDPD 109 (382)
T ss_pred ccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhcccc-ccHHH----HHHHHHHHHhccCCCCEEEEEEEEEcCC
Confidence 45899999999999999999984 66788887644332221 12233 379999999998 999999999999866
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .++|||++.||.|.+.|... .+++..+..++.||+.|+.|||+.||+||||||+|+|+.
T Consensus 110 ~--------------~~lvmEL~~GGeLfd~i~~~------~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~ 169 (382)
T KOG0032|consen 110 S--------------VYLVMELCEGGELFDRIVKK------HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLA 169 (382)
T ss_pred e--------------EEEEEEecCCchHHHHHHHc------cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeec
Confidence 4 49999999999999999872 399999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
... .+.+.+|++|||++....... .....+||+.|+|||++.+ ..|+..+||||+||++|.|
T Consensus 170 ~~~---~~~~~ik~~DFGla~~~~~~~-----------~~~~~~Gtp~y~APEvl~~----~~y~~~~DiWS~Gvi~yiL 231 (382)
T KOG0032|consen 170 SKD---EGSGRIKLIDFGLAKFIKPGE-----------RLHTIVGTPEYVAPEVLGG----RPYGDEVDVWSIGVILYIL 231 (382)
T ss_pred ccc---CCCCcEEEeeCCCceEccCCc-----------eEeeecCCccccCchhhcC----CCCCcccchhHHHHHHHHH
Confidence 652 122579999999998765411 1235679999999999986 6789999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+.|.+||.+.+.......|..+...-... .+ ..++..+.+++..|+..||.+|+|+
T Consensus 232 L~G~~PF~~~~~~~~~~~i~~~~~~f~~~-----------------------~w-~~is~~akd~i~~ll~~dp~~R~ta 287 (382)
T KOG0032|consen 232 LSGVPPFWGETEFEIFLAILRGDFDFTSE-----------------------PW-DDISESAKDFIRKLLEFDPRKRLTA 287 (382)
T ss_pred hhCCCCCcCCChhHHHHHHHcCCCCCCCC-----------------------Cc-cccCHHHHHHHHHhcccCcccCCCH
Confidence 99999999988877777776665421111 11 1567789999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001143 1123 GDLYEMFVARTS 1134 (1141)
Q Consensus 1123 ~ElL~~L~~~~~ 1134 (1141)
.++++|+|....
T Consensus 288 ~~~L~HpWi~~~ 299 (382)
T KOG0032|consen 288 AQALQHPWIKSI 299 (382)
T ss_pred HHHhcCccccCC
Confidence 999999998764
No 79
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=3e-36 Score=352.19 Aligned_cols=265 Identities=22% Similarity=0.302 Sum_probs=205.7
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+|++.++||+|+||.||+|++. +..+|+|+....... ..... ..+.+|+.+++.++||||+++++++.+.
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~----~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMI-KRSDS----AFFWEERDIMAFANSPWVVQLFCAFQDD 115 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhhH----HHHHHHHHHHHhCCCCCEeeEEEEEEcC
Confidence 3567999999999999999999985 456777775321111 11112 2247899999999999999999998865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..|+||||+++|+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 116 ~--------------~~~lv~Ey~~gg~L~~~l~~------~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl 175 (370)
T cd05621 116 K--------------YLYMVMEYMPGGDLVNLMSN------YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL 175 (370)
T ss_pred C--------------EEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE
Confidence 5 34999999999999999875 258899999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+|........ .......||+.|+|||++.+......++.++||||+||++|+
T Consensus 176 ~~~-------~~~kL~DFG~a~~~~~~~~---------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilye 239 (370)
T cd05621 176 DKH-------GHLKLADFGTCMKMDETGM---------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFE 239 (370)
T ss_pred CCC-------CCEEEEecccceecccCCc---------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHH
Confidence 887 7899999999976532211 011245699999999999764333457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE-- 1118 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~-- 1118 (1141)
|++|+.||.+.+.......+..... ..++. ....+..+.+++..||..+|.+
T Consensus 240 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~~~~s~~~~~li~~~L~~~~~r~~ 294 (370)
T cd05621 240 MLVGDTPFYADSLVGTYSKIMDHKNSLNFPE-------------------------DVEISKHAKNLICAFLTDREVRLG 294 (370)
T ss_pred HHhCCCCCCCCCHHHHHHHHHhCCcccCCCC-------------------------cccCCHHHHHHHHHHccCchhccC
Confidence 9999999988776666655543221 11110 0144667899999999865544
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
|+++.|+++|+|+...
T Consensus 295 R~~~~e~l~hp~~~~~ 310 (370)
T cd05621 295 RNGVEEIKQHPFFKND 310 (370)
T ss_pred CCCHHHHhcCcccCCC
Confidence 8999999999999753
No 80
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.4e-36 Score=353.06 Aligned_cols=267 Identities=22% Similarity=0.253 Sum_probs=201.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|++. +..+|+|+..... .........+.+|+.++++++||||+++++.+.+.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~-----~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~- 74 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKAD-----VLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD- 74 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHH-----HHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-
Confidence 36999999999999999999974 5667887753211 001111233478999999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++|+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~E~~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~ 136 (376)
T cd05598 75 -------------NLYFVMDYIPGGDMMSLLIR-----LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDR 136 (376)
T ss_pred -------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECC
Confidence 34999999999999999976 346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccc---------------------------------cCCCCCCCCccCCCc
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA---------------------------------HRGIPAPDVCVGTPR 1010 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~---------------------------------~~~~~~~~~~~GT~~ 1010 (1141)
+ +.+||+|||+|..+.......... ...........||+.
T Consensus 137 ~-------~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 209 (376)
T cd05598 137 D-------GHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPN 209 (376)
T ss_pred C-------CCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCcc
Confidence 7 789999999985332100000000 000001123479999
Q ss_pred ccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCC
Q 001143 1011 WMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGS 1089 (1141)
Q Consensus 1011 Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~ 1089 (1141)
|+|||++.+ ..++.++|||||||++|+|++|+.||.+....+....+..... ...+.
T Consensus 210 y~aPE~~~~----~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~------------------ 267 (376)
T cd05598 210 YIAPEVLLR----TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPS------------------ 267 (376)
T ss_pred ccCHHHHcC----CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCC------------------
Confidence 999999976 5678999999999999999999999988776655444432111 00000
Q ss_pred CCCCchhhhhhHHHHHHHHHHhcccCCCCCC---CHHHHHHHHHhhc
Q 001143 1090 GFEKPEAELETLSFLVDVFRRCTEENPTERP---TAGDLYEMFVART 1133 (1141)
Q Consensus 1090 ~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP---Sa~ElL~~L~~~~ 1133 (1141)
....+..+.++|.+|+ .+|.+|+ ++.++++|+|+..
T Consensus 268 -------~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~ 306 (376)
T cd05598 268 -------QAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKG 306 (376)
T ss_pred -------CCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCC
Confidence 0134566888999876 5999999 9999999999864
No 81
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=4.7e-36 Score=342.65 Aligned_cols=249 Identities=27% Similarity=0.378 Sum_probs=194.4
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
++||+|+||.||+|++. +..+|+|+.+...... ....+. +..|..++..+ +||||+++++++....
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~----~~~e~~~l~~~~~hp~i~~~~~~~~~~~------ 69 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLE-DDDVEC----TMVERRVLALAWEHPFLTHLFCTFQTKE------ 69 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhhHHH----HHHHHHHHHhccCCCCccceeeEEEcCC------
Confidence 47999999999999985 4557888765332111 111222 24677777654 7999999999987654
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..++||||++|++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~gg~L~~~~~~-----~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~---- 132 (316)
T cd05592 70 --------HLFFVMEYLNGGDLMFHIQS-----SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKD---- 132 (316)
T ss_pred --------EEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCC----
Confidence 35999999999999999875 2468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~Dfg~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~ell~G~~P 195 (316)
T cd05592 133 ---GHIKIADFGMCKENMNGE----------GKASTFCGTPDYIAPEILKG----QKYNESVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred ---CCEEEccCcCCeECCCCC----------CccccccCCccccCHHHHcC----CCCCCcccchhHHHHHHHHHhCCCC
Confidence 789999999986532211 11224468999999999876 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH-HHHHH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA-GDLYE 1127 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa-~ElL~ 1127 (1141)
|.+.+..++...+.... +.++ ...+.++.+++.+||+.||.+||++ .++++
T Consensus 196 f~~~~~~~~~~~i~~~~-~~~~---------------------------~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05592 196 FHGEDEDELFDSILNDR-PHFP---------------------------RWISKEAKDCLSKLFERDPTKRLGVDGDIRQ 247 (316)
T ss_pred CCCCCHHHHHHHHHcCC-CCCC---------------------------CCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 99877776666654322 1111 1345568999999999999999986 47889
Q ss_pred HHHhhc
Q 001143 1128 MFVART 1133 (1141)
Q Consensus 1128 ~L~~~~ 1133 (1141)
|+|+..
T Consensus 248 h~~~~~ 253 (316)
T cd05592 248 HPFFRG 253 (316)
T ss_pred CcccCC
Confidence 988764
No 82
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.1e-35 Score=323.99 Aligned_cols=253 Identities=24% Similarity=0.332 Sum_probs=203.6
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|++|.||+|.+. +..+++|..... ......... +.+|+.++++++||||+++++++.+.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 72 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLS--KMNRREREE----AIDEARVLAKLDSSYIIRYYESFLDKG-- 72 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehh--hCCHHHHHH----HHHHHHHHHhcCCCCeehheeeeccCC--
Confidence 5889999999999999999984 566777765433 222233333 378999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.++++.. ....+++..+..++.||+.||.|||+.||+||||||+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~ 137 (256)
T cd08529 73 ------------KLNIVMEYAENGDLHKLLKMQ---RGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAY 137 (256)
T ss_pred ------------EEEEEEEeCCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCC
Confidence 349999999999999999762 23468999999999999999999999999999999999999987
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+..+..... ......|++.|+|||++.+ ..++.++|||||||++|+|++
T Consensus 138 -------~~~~l~df~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~~ 196 (256)
T cd08529 138 -------DNVKIGDLGVAKLLSDNTN----------FANTIVGTPYYLSPELCED----KPYNEKSDVWALGVVLYECCT 196 (256)
T ss_pred -------CCEEEcccccceeccCccc----------hhhccccCccccCHHHhcC----CCCCCccchHHHHHHHHHHHh
Confidence 7899999999876543211 1123357889999999876 457889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||...+..+....+..+..+.+.. ..+..+.+++.+||+.+|++||++.+
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~i~~~l~~~p~~Rp~~~~ 249 (256)
T cd08529 197 GKHPFDANNQGALILKIIRGVFPPVSQ---------------------------MYSQQLAQLIDQCLTKDYRQRPDTFQ 249 (256)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCcc---------------------------ccCHHHHHHHHHHccCCcccCcCHHH
Confidence 999998777666555554443332221 34456899999999999999999999
Q ss_pred HHHHHH
Q 001143 1125 LYEMFV 1130 (1141)
Q Consensus 1125 lL~~L~ 1130 (1141)
+++++|
T Consensus 250 ll~~~~ 255 (256)
T cd08529 250 LLRNPS 255 (256)
T ss_pred HhhCCC
Confidence 999876
No 83
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=8.9e-36 Score=347.91 Aligned_cols=286 Identities=20% Similarity=0.235 Sum_probs=205.5
Q ss_pred CceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.++||+|+||.||+|.+ .+..+|+|.. ..........+. +.+|+.+++.++||||+++++++......
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~--~~~~~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 74 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKM--PNVFQNLVSCKR----VFRELKMLCFFKHDNVLSALDILQPPHID 74 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEec--cccccchHHHHH----HHHHHHHHHhCCCCCcCCHhheecCCCcc
Confidence 478899999999999999997 4566777754 222222222233 37999999999999999999998754311
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.....|+||||+. ++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 75 ---------~~~~~~lv~e~~~-~~l~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~ 139 (372)
T cd07853 75 ---------PFEEIYVVTELMQ-SDLHKIIVS-----PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSN 139 (372)
T ss_pred ---------ccceEEEEeeccc-cCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCC
Confidence 1225699999997 688888754 3469999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||+++........ ......+|+.|+|||++.+ ...++.++|||||||++|||++
T Consensus 140 -------~~~kL~Dfg~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il~el~~ 200 (372)
T cd07853 140 -------CVLKICDFGLARVEEPDESK---------HMTQEVVTQYYRAPEILMG---SRHYTSAVDIWSVGCIFAELLG 200 (372)
T ss_pred -------CCEEeccccceeecccCccc---------cCCCCCcCCCcCCHHHHcC---CCCCCcHHHHHhHHHHHHHHHc
Confidence 78999999998754321110 1123357899999999876 2347899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCC-CCc---hhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1045 LQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGF-EKP---EAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+.||.+.+..+....+.. ...+... .+.................. ... ......++++.+||.+||+.||.+|
T Consensus 201 g~~pf~~~~~~~~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R 279 (372)
T cd07853 201 RRILFQAQSPIQQLDLITDLLGTPSLE-AMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKR 279 (372)
T ss_pred CCCCCCCCCHHHHHHHHHHHcCCCCHH-HHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhC
Confidence 9999998777766665533 2222221 11110000000000000000 000 0011346778999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
||+.|+++|+|+..
T Consensus 280 ~t~~e~l~hp~~~~ 293 (372)
T cd07853 280 ISAADALAHPYLDE 293 (372)
T ss_pred cCHHHHhcCHhhCC
Confidence 99999999999875
No 84
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.2e-36 Score=346.37 Aligned_cols=249 Identities=25% Similarity=0.347 Sum_probs=197.4
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 889 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g 889 (1141)
+.||+|+||.||+|.+ .+..+|+|+....... ...... .+..|+.++..++||||+++++++....
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~-~~~~~~----~~~~e~~~l~~~~hp~i~~~~~~~~~~~------- 68 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVA----HTLTENRVLQNSRHPFLTALKYSFQTHD------- 68 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHH----HHHHHHHHHHhCCCCCCCceEEEEEcCC-------
Confidence 4799999999999987 4567888876533211 111222 3368999999999999999999987655
Q ss_pred CCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCeeeecccccC
Q 001143 890 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 890 ~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..++||||+++++|..++.. ...+++..+..++.||+.||.|||+ +||+||||||+|||++.+
T Consensus 69 -------~~~lv~E~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~---- 132 (325)
T cd05594 69 -------RLCFVMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD---- 132 (325)
T ss_pred -------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCC----
Confidence 34999999999999988865 3468999999999999999999997 799999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~tG~~P 195 (325)
T cd05594 133 ---GHIKITDFGLCKEGIKDGA----------TMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLP 195 (325)
T ss_pred ---CCEEEecCCCCeecCCCCc----------ccccccCCcccCCHHHHcc----CCCCCccccccccceeeeeccCCCC
Confidence 7899999999864321110 1123468999999999876 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAG 1123 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-----Sa~ 1123 (1141)
|.+....+....+..... .++ ...++++.+++.+||+.||++|+ ++.
T Consensus 196 f~~~~~~~~~~~i~~~~~-~~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~ 247 (325)
T cd05594 196 FYNQDHEKLFELILMEEI-RFP---------------------------RTLSPEAKSLLSGLLKKDPKQRLGGGPDDAK 247 (325)
T ss_pred CCCCCHHHHHHHHhcCCC-CCC---------------------------CCCCHHHHHHHHHHhhcCHHHhCCCCCCCHH
Confidence 987766655555432221 110 13456789999999999999996 999
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
++++|+|+..
T Consensus 248 ~il~h~~~~~ 257 (325)
T cd05594 248 EIMQHKFFAG 257 (325)
T ss_pred HHhcCCCcCC
Confidence 9999999864
No 85
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=5.4e-36 Score=342.18 Aligned_cols=249 Identities=25% Similarity=0.362 Sum_probs=195.4
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
++||+|+||.||+|++. +..+|+|+.+....... ...+ ....|..++... +||||+++++++.+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~-~~~~----~~~~e~~~l~~~~~~~~i~~~~~~~~~~~------ 69 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLID-DDVE----CTMVEKRVLALAWENPFLTHLYCTFQTKE------ 69 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhc-chHH----HHHHHHHHHHhccCCCCccCeeEEEEeCC------
Confidence 47999999999999984 55678887653321111 1112 225788888755 8999999999998655
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
+.|+||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~E~~~~g~L~~~i~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~---- 132 (316)
T cd05620 70 --------HLFFVMEFLNGGDLMFHIQD-----KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRD---- 132 (316)
T ss_pred --------EEEEEECCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----
Confidence 34999999999999999875 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~el~~g~~P 195 (316)
T cd05620 133 ---GHIKIADFGMCKENVFGD----------NRASTFCGTPDYIAPEILQG----LKYTFSVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred ---CCEEeCccCCCeecccCC----------CceeccCCCcCccCHHHHcC----CCCCcccchhhhHHHHHHHHhCCCC
Confidence 789999999986422111 11224568999999999976 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH-HHHHH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA-GDLYE 1127 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa-~ElL~ 1127 (1141)
|.+.+..++...+..... ..+ ...+.++.+++.+||+.||.+||++ +++++
T Consensus 196 f~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~ 247 (316)
T cd05620 196 FHGDDEDELFESIRVDTP-HYP---------------------------RWITKESKDILEKLFERDPTRRLGVVGNIRG 247 (316)
T ss_pred CCCCCHHHHHHHHHhCCC-CCC---------------------------CCCCHHHHHHHHHHccCCHHHcCCChHHHHc
Confidence 988777666665543221 111 0245568999999999999999997 58888
Q ss_pred HHHhhc
Q 001143 1128 MFVART 1133 (1141)
Q Consensus 1128 ~L~~~~ 1133 (1141)
|+|+..
T Consensus 248 h~~f~~ 253 (316)
T cd05620 248 HPFFKT 253 (316)
T ss_pred CCCcCC
Confidence 999865
No 86
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=6.6e-36 Score=342.20 Aligned_cols=254 Identities=25% Similarity=0.326 Sum_probs=201.0
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~ 883 (1141)
+|++.+.||+|+||.||+|++. +..+|+|+....... .....+ .+..|..++..+ +||+|+++++++...+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~----~~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVE----CTMVEKRVLALSGKPPFLTQLHSCFQTMD- 74 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHH----HHHHHHHHHHhccCCCeEeeEEEEEecCC-
Confidence 5889999999999999999985 456788876532211 111112 236788888777 5899999999987655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++|+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~E~~~~g~L~~~~~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~ 136 (323)
T cd05616 75 -------------RLYFVMEYVNGGDLMYQIQQ-----VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS 136 (323)
T ss_pred -------------EEEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECC
Confidence 34999999999999999875 246899999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 137 ~-------~~~kL~DfG~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~ell 195 (323)
T cd05616 137 E-------GHIKIADFGMCKENMWDG----------VTTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVLLYEML 195 (323)
T ss_pred C-------CcEEEccCCCceecCCCC----------CccccCCCChhhcCHHHhcC----CCCCCccchhchhHHHHHHH
Confidence 7 789999999986432111 01123468999999999976 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC--
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT-- 1121 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS-- 1121 (1141)
+|+.||.+.+..++...+...... ++ ...+.++.+++.+||+.||.+|++
T Consensus 196 tg~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05616 196 AGQAPFEGEDEDELFQSIMEHNVA-YP---------------------------KSMSKEAVAICKGLMTKHPGKRLGCG 247 (323)
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------CcCCHHHHHHHHHHcccCHHhcCCCC
Confidence 999999987777776665433211 11 034567899999999999999997
Q ss_pred ---HHHHHHHHHhhc
Q 001143 1122 ---AGDLYEMFVART 1133 (1141)
Q Consensus 1122 ---a~ElL~~L~~~~ 1133 (1141)
..++++|+|++.
T Consensus 248 ~~~~~~i~~h~~~~~ 262 (323)
T cd05616 248 PEGERDIKEHAFFRY 262 (323)
T ss_pred CCCHHHHhcCCCcCC
Confidence 489999988863
No 87
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-35 Score=339.73 Aligned_cols=281 Identities=23% Similarity=0.298 Sum_probs=202.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
-++|++.++||+|+||.||+|.+. +..+++|+..... ....... +.+|++++++++||||+++++++.+.+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~---~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~ 76 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI---KPAIRNQ----IIRELQVLHECNSPYIVGFYGAFYSDG 76 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc---CHHHHHH----HHHHHHHHHHCCCCcccceeEEEEECC
Confidence 357999999999999999999985 4456666644321 2222233 479999999999999999999998755
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCCeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENILI 961 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~NILl 961 (1141)
+.++||||+++++|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||+
T Consensus 77 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili 137 (333)
T cd06650 77 --------------EISICMEHMDGGSLDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV 137 (333)
T ss_pred --------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEE
Confidence 34999999999999999975 34689999999999999999999975 79999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||++..+.... .....||..|+|||++.+ ..++.++|||||||++|+
T Consensus 138 ~~~-------~~~kL~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~il~~ 194 (333)
T cd06650 138 NSR-------GEIKLCDFGVSGQLIDSM------------ANSFVGTRSYMSPERLQG----THYSVQSDIWSMGLSLVE 194 (333)
T ss_pred cCC-------CCEEEeeCCcchhhhhhc------------cccCCCCccccCHHHhcC----CCCCcHHHHHHHHHHHHH
Confidence 877 789999999986543211 123458999999999876 467899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhc-cCccccc----------------cc-cCCCCCCchhhhhhHHH
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALG-SCHEHEV----------------AQ-SGSGFEKPEAELETLSF 1103 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~-~~~~~~~----------------~~-~~~~~~~~~~~~~~~~~ 1103 (1141)
|++|+.||......+....+................ ....... .. ..............+.+
T Consensus 195 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (333)
T cd06650 195 MAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAE 274 (333)
T ss_pred HHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHH
Confidence 999999998655444333221100000000000000 0000000 00 00000000000124567
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1104 LVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1104 L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
+.+|+.+||+.||++|||+.|+++|+|++..
T Consensus 275 ~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~ 305 (333)
T cd06650 275 FQDFVNKCLIKNPAERADLKQLMVHAFIKRS 305 (333)
T ss_pred HHHHHHHhccCCcccCcCHHHHhhCHHHhcC
Confidence 9999999999999999999999999999754
No 88
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.4e-36 Score=362.37 Aligned_cols=267 Identities=25% Similarity=0.381 Sum_probs=218.9
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~-----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
.+-.+..+.+.||+|+||.||+|+.. +....|+||.++.. ......++| ++|++++..++|||||+++|.
T Consensus 483 i~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF----~REaeLla~l~H~nIVrLlGV 557 (774)
T KOG1026|consen 483 IPRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDF----RREAELLAELQHPNIVRLLGV 557 (774)
T ss_pred echhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHH----HHHHHHHHhccCCCeEEEEEE
Confidence 34556789999999999999999862 34445555556542 223344555 899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcC---------CCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG---------EKHVSVKLALFIAQDVAAALVELHSKH 948 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~---------~~~Ls~~~i~~Ia~QIa~gL~yLHs~g 948 (1141)
+.+.+.+ ++|+|||..|||.++++...... ..+++..+.+.|+.|||.|++||-++.
T Consensus 558 C~~~~P~--------------~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~ 623 (774)
T KOG1026|consen 558 CREGDPL--------------CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH 623 (774)
T ss_pred EccCCee--------------EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 9987754 99999999999999998654322 223899999999999999999999999
Q ss_pred ccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001143 949 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1028 (1141)
Q Consensus 949 IvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1028 (1141)
+|||||-..|+||.++ ..|||+|||+++.+-...... .+ ....-...|||||.+.. ..|+.
T Consensus 624 FVHRDLATRNCLVge~-------l~VKIsDfGLsRdiYssDYYk---~~-----~~t~lPIRWMppEsIly----~kFTt 684 (774)
T KOG1026|consen 624 FVHRDLATRNCLVGEN-------LVVKISDFGLSRDIYSSDYYK---VR-----GNTLLPIRWMPPESILY----GKFTT 684 (774)
T ss_pred ccccchhhhhceeccc-------eEEEecccccchhhhhhhhhc---cc-----CCceeeeecCCHHHhhc----Ccccc
Confidence 9999999999999988 899999999998654433221 11 12234678999999987 78999
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHH
Q 001143 1029 EVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1107 (1141)
Q Consensus 1029 ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1107 (1141)
++|||||||+|||+++ |+.||.+.+..++++.|+.+....-+ ..++.++++|
T Consensus 685 eSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~P---------------------------e~CP~~vY~L 737 (774)
T KOG1026|consen 685 ESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSCP---------------------------ENCPTEVYSL 737 (774)
T ss_pred hhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccCC---------------------------CCCCHHHHHH
Confidence 9999999999999999 99999999999999999887653222 2788899999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
|..||+.+|.+||+++||-..|.....
T Consensus 738 M~~CW~~~P~~RPsF~eI~~~L~~~~~ 764 (774)
T KOG1026|consen 738 MLECWNENPKRRPSFKEIHSRLQAWAQ 764 (774)
T ss_pred HHHHhhcCcccCCCHHHHHHHHHHHHh
Confidence 999999999999999999988876543
No 89
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=4.4e-36 Score=343.64 Aligned_cols=249 Identities=26% Similarity=0.315 Sum_probs=194.6
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHhhCCCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
+.||+|+||+||+|++. +..+|+|+........ ..... .+..|.. +++.++||||+++++.+....
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~----~~~~e~~~~~~~l~hp~iv~~~~~~~~~~------ 69 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILK-KKEQK----HIMAERNVLLKNVKHPFLVGLHYSFQTAD------ 69 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhh-hhHHH----HHHHHHHHHHhhCCCCCCCCeeEEEEeCC------
Confidence 47999999999999984 5678888764321111 11111 2245554 457789999999999987654
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..++||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~---- 132 (323)
T cd05575 70 --------KLYFVLDYVNGGELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQ---- 132 (323)
T ss_pred --------EEEEEEcCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCC----
Confidence 34999999999999999875 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~ell~g~~p 195 (323)
T cd05575 133 ---GHVVLTDFGLCKEGIEHS----------KTTSTFCGTPEYLAPEVLRK----QPYDRTVDWWCLGAVLYEMLYGLPP 195 (323)
T ss_pred ---CcEEEeccCCCcccccCC----------CccccccCChhhcChhhhcC----CCCCccccccccchhhhhhhcCCCC
Confidence 789999999986432111 11123468999999999876 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH----HH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA----GD 1124 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa----~E 1124 (1141)
|...+..+....+...... +. ...+..+.+++.+||+.||.+||++ .+
T Consensus 196 f~~~~~~~~~~~i~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (323)
T cd05575 196 FYSRDTAEMYDNILNKPLR-LK---------------------------PNISVSARHLLEGLLQKDRTKRLGAKDDFLE 247 (323)
T ss_pred CCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHHhCCCCCCCHHH
Confidence 9887776666665432211 00 1345678999999999999999987 69
Q ss_pred HHHHHHhhc
Q 001143 1125 LYEMFVART 1133 (1141)
Q Consensus 1125 lL~~L~~~~ 1133 (1141)
+++|+|+..
T Consensus 248 il~~~~~~~ 256 (323)
T cd05575 248 IKNHVFFSS 256 (323)
T ss_pred HHcCCCcCC
Confidence 999999854
No 90
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=3.3e-35 Score=326.29 Aligned_cols=254 Identities=20% Similarity=0.301 Sum_probs=197.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
..+|++.+.||+|+||.||+|.+. ...+|+|+. +... ....... +.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~--~~~~-~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~ 76 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTL--RAGC-SDKQRRG----FLAEALTLGQFDHSNIVRLEGVIT 76 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEec--CCCC-CHHHHHH----HHHHHHHHhcCCCCCcCeEEEEEe
Confidence 457899999999999999999863 234555553 3221 1222223 479999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.... .++||||+++++|.+++... ...+++..++.++.||+.||+|||++|++||||||+||
T Consensus 77 ~~~~--------------~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~ni 138 (266)
T cd05064 77 RGNT--------------MMIVTEYMSNGALDSFLRKH----EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKV 138 (266)
T ss_pred cCCC--------------cEEEEEeCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhE
Confidence 6543 49999999999999998751 23689999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.++++|||.+........ .......++..|+|||.+.+ ..++.++|||||||++
T Consensus 139 li~~~-------~~~~l~dfg~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l 198 (266)
T cd05064 139 LVNSD-------LVCKISGFRRLQEDKSEAI---------YTTMSGKSPVLWAAPEAIQY----HHFSSASDVWSFGIVM 198 (266)
T ss_pred EEcCC-------CcEEECCCcccccccccch---------hcccCCCCceeecCHHHHhh----CCccchhHHHHHHHHH
Confidence 99887 7899999998754321110 01112235678999999876 5678999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
||+++ |..||......+....+..+..+..+ ..++..+.+++.+||+.+|.+
T Consensus 199 ~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~c~~~~p~~ 251 (266)
T cd05064 199 WEVMSYGERPYWDMSGQDVIKAVEDGFRLPAP---------------------------RNCPNLLHQLMLDCWQKERGE 251 (266)
T ss_pred HHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCC---------------------------CCCCHHHHHHHHHHcCCCchh
Confidence 99775 99999887776666665444322111 145567999999999999999
Q ss_pred CCCHHHHHHHHH
Q 001143 1119 RPTAGDLYEMFV 1130 (1141)
Q Consensus 1119 RPSa~ElL~~L~ 1130 (1141)
||++.+|++.+.
T Consensus 252 RP~~~~i~~~l~ 263 (266)
T cd05064 252 RPRFSQIHSILS 263 (266)
T ss_pred CCCHHHHHHHHH
Confidence 999999998753
No 91
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.5e-35 Score=331.82 Aligned_cols=282 Identities=22% Similarity=0.221 Sum_probs=198.7
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEecC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKISS 881 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkllg~~~~~ 881 (1141)
+|++.+.||+|+||+||+|.+. +..+|+|+.+........ ... +.+|+.+++.+ +||||+++++++...
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~--~~~----~~~e~~~l~~l~~~~h~ni~~~~~~~~~~ 74 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL--PLS----TVREVALLKRLEAFDHPNIVRLMDVCATS 74 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC--chH----HHHHHHHHHHhhhcCCCCeeeeeeeeccc
Confidence 5899999999999999999984 556777765433211111 111 24566666655 699999999988653
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. ......++||||++ ++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 75 ~~---------~~~~~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili 141 (288)
T cd07863 75 RT---------DRETKVTLVFEHVD-QDLRTYLDK---VPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV 141 (288)
T ss_pred cC---------CCCceEEEEEcccc-cCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 21 12235699999997 689998875 223458999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||++....... ......||..|+|||++.+ ..++.++|||||||++|+
T Consensus 142 ~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~DiwslG~~l~~ 199 (288)
T cd07863 142 TSG-------GQVKLADFGLARIYSCQM-----------ALTPVVVTLWYRAPEVLLQ----STYATPVDMWSVGCIFAE 199 (288)
T ss_pred CCC-------CCEEECccCccccccCcc-----------cCCCccccccccCchHhhC----CCCCCcchhhhHHHHHHH
Confidence 887 789999999987543211 1123458999999999876 567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++|++||.+....+....+.. ...+.. ..+........... ...............+..+.+++.+||+.||++||
T Consensus 200 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 277 (288)
T cd07863 200 MFRRKPLFCGNSEADQLGKIFDLIGLPPE-DDWPRDVTLPRGAF-SPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRI 277 (288)
T ss_pred HHhCCcCcCCCCHHHHHHHHHHHhCCCCh-hhCccccccccccc-CCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCC
Confidence 9999999987666554444422 111111 01000000000000 00000001111124567789999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
|+.|++.|+||
T Consensus 278 t~~~~l~hp~f 288 (288)
T cd07863 278 SAFRALQHPFF 288 (288)
T ss_pred CHHHHhcCCCC
Confidence 99999999986
No 92
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=6.5e-36 Score=350.27 Aligned_cols=266 Identities=23% Similarity=0.279 Sum_probs=200.3
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|++.++||+|+||.||+|++. +..+|+|+..... .........+.+|+.++++++|||||++++.+.+..
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~-----~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~-- 74 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKD-----VLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-- 74 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC--
Confidence 5899999999999999999984 4557777643221 111122234478999999999999999999998655
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
+.|+||||+++|+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.+
T Consensus 75 ------------~~~lv~E~~~gg~L~~~l~~-----~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~ 137 (382)
T cd05625 75 ------------NLYFVMDYIPGGDMMSLLIR-----MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 137 (382)
T ss_pred ------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 34999999999999999876 2468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeecccccccccccccccc-------------------------------------ccCCCCCCCCccC
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCI-------------------------------------AHRGIPAPDVCVG 1007 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~-------------------------------------~~~~~~~~~~~~G 1007 (1141)
+.+||+|||+|..+......... ...........+|
T Consensus 138 -------g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 210 (382)
T cd05625 138 -------GHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVG 210 (382)
T ss_pred -------CCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccc
Confidence 78999999998543211000000 0000001123469
Q ss_pred CCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhccCccccccc
Q 001143 1008 TPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQ 1086 (1141)
Q Consensus 1008 T~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~ 1086 (1141)
|+.|+|||++.+ ..++.++|||||||++|||++|+.||.+.+..+....+.... ....+.
T Consensus 211 t~~Y~aPE~~~~----~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~--------------- 271 (382)
T cd05625 211 TPNYIAPEVLLR----TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPP--------------- 271 (382)
T ss_pred CcccCCHHHhcC----CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCC---------------
Confidence 999999999876 567899999999999999999999998877665554443211 111110
Q ss_pred cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC---HHHHHHHHHhhc
Q 001143 1087 SGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT---AGDLYEMFVART 1133 (1141)
Q Consensus 1087 ~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS---a~ElL~~L~~~~ 1133 (1141)
....++++.++|.+|+ .+|.+|++ +.++++|+|+..
T Consensus 272 ----------~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~ 310 (382)
T cd05625 272 ----------QAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKT 310 (382)
T ss_pred ----------cccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCC
Confidence 0134567888898876 59999987 999999999865
No 93
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=9.6e-36 Score=340.22 Aligned_cols=249 Identities=27% Similarity=0.348 Sum_probs=195.4
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
+.||+|+||.||+|++. +..+|+|+.+....... .... ....|..++..+ +||||+++++++.+.+.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~-~~~~----~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~----- 70 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMD-DDVE----CTMVEKRVLSLAWEHPFLTHLYCTFQTKEN----- 70 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhc-chHH----HHHHHHHHHHhccCCCcCcceEEEEEeCCE-----
Confidence 47999999999999985 45678887653321111 1112 225688888765 89999999999886553
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
.++||||+++|+|.+++.. ...+++.++..++.||+.||.|||++||+||||||+|||++.+
T Consensus 71 ---------~~lv~ey~~~g~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~---- 132 (316)
T cd05619 71 ---------LFFVMEYLNGGDLMFHIQS-----CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTD---- 132 (316)
T ss_pred ---------EEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCC----
Confidence 4999999999999999875 2468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~el~~G~~p 195 (316)
T cd05619 133 ---GHIKIADFGMCKENMLGD----------AKTCTFCGTPDYIAPEILLG----QKYNTSVDWWSFGVLLYEMLIGQSP 195 (316)
T ss_pred ---CCEEEccCCcceECCCCC----------CceeeecCCccccCHHHHcC----CCCCchhhhhhHHHHHHHHHhCCCC
Confidence 789999999986432111 01123468999999999876 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH-HHHH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG-DLYE 1127 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~-ElL~ 1127 (1141)
|.+.+..++...+..... ..+ ...+..+.+++.+||+.||.+||++. ++++
T Consensus 196 f~~~~~~~~~~~i~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 196 FHGHDEEELFQSIRMDNP-CYP---------------------------RWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred CCCCCHHHHHHHHHhCCC-CCC---------------------------ccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 988777666666543221 111 02345689999999999999999996 8999
Q ss_pred HHHhhc
Q 001143 1128 MFVART 1133 (1141)
Q Consensus 1128 ~L~~~~ 1133 (1141)
|+|+..
T Consensus 248 h~~~~~ 253 (316)
T cd05619 248 HPFFRE 253 (316)
T ss_pred CcccCC
Confidence 999864
No 94
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.8e-35 Score=345.33 Aligned_cols=277 Identities=23% Similarity=0.260 Sum_probs=197.1
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+|++.++||+|+||.||+|.+. +..+|+|. .. ... +.+|+.++++++|||||++++++...
T Consensus 90 ~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~--~~--------~~~----~~~E~~il~~l~HpnIv~~~~~~~~~ 155 (391)
T PHA03212 90 EKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKA--GQ--------RGG----TATEAHILRAINHPSIIQLKGTFTYN 155 (391)
T ss_pred ccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEec--hh--------hhh----hHHHHHHHHhCCCCCCCCEeEEEEEC
Confidence 3457999999999999999999985 44556653 21 112 26899999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. .++|||++. ++|..++.. ...+++..++.|+.||+.||.|||++||+||||||+|||+
T Consensus 156 ~~--------------~~lv~e~~~-~~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll 215 (391)
T PHA03212 156 KF--------------TCLILPRYK-TDLYCYLAA-----KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFI 215 (391)
T ss_pred Ce--------------eEEEEecCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEE
Confidence 43 499999996 789888865 2468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+|........ .......||+.|+|||++.+ ..++.++|||||||++||
T Consensus 216 ~~~-------~~vkL~DFG~a~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvil~e 275 (391)
T PHA03212 216 NHP-------GDVCLGDFGAACFPVDINA---------NKYYGWAGTIATNAPELLAR----DPYGPAVDIWSAGIVLFE 275 (391)
T ss_pred cCC-------CCEEEEeCCcccccccccc---------cccccccCccCCCChhhhcC----CCCCcHHHHHHHHHHHHH
Confidence 877 7899999999864322110 01123469999999999876 568899999999999999
Q ss_pred HHhCCCCCCCCC--------HHHHHHHHHhCCC-CC-chhHH-hhhccCcccccc-ccCCCCCCch--hhhhhHHHHHHH
Q 001143 1042 LLTLQVPYMGLS--------ELEIHDLIQMGKR-PR-LTDEL-EALGSCHEHEVA-QSGSGFEKPE--AELETLSFLVDV 1107 (1141)
Q Consensus 1042 LLTGk~Pf~~~~--------~~el~~~I~~~~~-p~-l~~~l-~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~L~dL 1107 (1141)
|++|+.||.... ...+...+..... +. .+... ............ ........+. .....+.++.+|
T Consensus 276 lltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~L 355 (391)
T PHA03212 276 MATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYL 355 (391)
T ss_pred HHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHH
Confidence 999998875321 1122222222111 11 00000 000000000000 0000000111 112456789999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
|.+||++||.+|||+.|+++|+||..-
T Consensus 356 i~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 356 ICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred HHHHhcCChhhCCCHHHHhcChhhccC
Confidence 999999999999999999999999763
No 95
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.8e-35 Score=333.31 Aligned_cols=266 Identities=20% Similarity=0.271 Sum_probs=196.6
Q ss_pred CCCceEeeeecccCceEEEEEEECC------------------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS------------------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL 866 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~------------------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L 866 (1141)
..+|++.++||+|+||.||+|.+.. ..+|+|+.... ........ +.+|+.++.++
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~----~~~E~~~l~~l 76 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD---ANKNARND----FLKEVKILSRL 76 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC---CCHHHHHH----HHHHHHHHhhc
Confidence 3578999999999999999998632 24677765322 12222333 47999999999
Q ss_pred CCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh--------------cCCCCCCHHHHHH
Q 001143 867 RHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE--------------TGEKHVSVKLALF 932 (1141)
Q Consensus 867 ~HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~--------------~~~~~Ls~~~i~~ 932 (1141)
+||||+++++++.+... .++||||+++++|.+++..... .....+++..+.+
T Consensus 77 ~h~niv~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (304)
T cd05096 77 KDPNIIRLLGVCVDEDP--------------LCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLH 142 (304)
T ss_pred CCCCeeEEEEEEecCCc--------------eEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHH
Confidence 99999999999886543 4999999999999999865321 1113478889999
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCccc
Q 001143 933 IAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWM 1012 (1141)
Q Consensus 933 Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 1012 (1141)
++.||+.||.|||++||+||||||+|||++.+ +.+||+|||+++.+...... .......++..|+
T Consensus 143 i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~-------~~~kl~DfG~~~~~~~~~~~--------~~~~~~~~~~~y~ 207 (304)
T cd05096 143 VALQIASGMKYLSSLNFVHRDLATRNCLVGEN-------LTIKIADFGMSRNLYAGDYY--------RIQGRAVLPIRWM 207 (304)
T ss_pred HHHHHHHHHHHHHHCCccccCcchhheEEcCC-------ccEEECCCccceecccCcee--------EecCcCCCCcccc
Confidence 99999999999999999999999999999987 78999999998754332111 0112334678899
Q ss_pred chhhhccccCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCC
Q 001143 1013 APEVLRAMHKPNLYGLEVDIWSYGCLLLELLT--LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSG 1090 (1141)
Q Consensus 1013 APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT--Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~ 1090 (1141)
|||++.+ ..++.++|||||||++|||++ +..||...+..+....+...........
T Consensus 208 aPE~~~~----~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------ 265 (304)
T cd05096 208 AWECILM----GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQV------------------ 265 (304)
T ss_pred CHHHHhc----CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccc------------------
Confidence 9999875 568899999999999999987 5678877665554443321110000000
Q ss_pred CCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 001143 1091 FEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1091 ~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~ 1130 (1141)
.......++..+.+++.+||..||.+|||+.+|.+.+.
T Consensus 266 --~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 266 --YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred --cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 00001145667999999999999999999999987653
No 96
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.5e-35 Score=333.21 Aligned_cols=284 Identities=18% Similarity=0.232 Sum_probs=206.3
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+..+++|++.++||+|+||.||+|++. +..+|+|....... .. ... .+.+|+.++++++||||+++++++.
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~--~~-~~~----~~~~E~~~l~~l~h~nI~~~~~~~~ 74 (301)
T cd07873 2 FGKLETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHE--EG-APC----TAIREVSLLKDLKHANIVTLHDIIH 74 (301)
T ss_pred CccccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccc--cC-chh----HHHHHHHHHHhcCCCCcceEEEEEe
Confidence 456789999999999999999999885 45677776543321 11 111 2368999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
... ..++||||++ ++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 75 ~~~--------------~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Ni 135 (301)
T cd07873 75 TEK--------------SLTLVFEYLD-KDLKQYLDDC----GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNL 135 (301)
T ss_pred cCC--------------eEEEEEeccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHE
Confidence 654 3499999997 6999888652 33589999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.++|+|||++........ ......+++.|+|||++.+ ...++.++|||||||++
T Consensus 136 l~~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~---~~~~~~~~Dv~slG~~l 195 (301)
T cd07873 136 LINER-------GELKLADFGLARAKSIPTK----------TYSNEVVTLWYRPPDILLG---STDYSTQIDMWGVGCIF 195 (301)
T ss_pred EECCC-------CcEEECcCcchhccCCCCC----------cccccceeecccCcHHHhC---CCCCccHHHHHHHHHHH
Confidence 99887 7899999999865432111 1112347889999999865 23567899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccC-CCCC---CchhhhhhHHHHHHHHHHhcccC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSG-SGFE---KPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|+|++|+.||...+..+....+...........+...... ....... .... ........++.+.+||.+||+.|
T Consensus 196 ~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d 273 (301)
T cd07873 196 YEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSN--EEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFE 273 (301)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcc--ccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCC
Confidence 9999999999877665554444322211111111110000 0000000 0000 00111245677899999999999
Q ss_pred CCCCCCHHHHHHHHHhhc
Q 001143 1116 PTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~~ 1133 (1141)
|.+|||++|+++|+|++.
T Consensus 274 p~~R~t~~eil~h~~f~~ 291 (301)
T cd07873 274 GRKRISAEEAMKHPYFHC 291 (301)
T ss_pred cccCcCHHHHhcCccccc
Confidence 999999999999999974
No 97
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.5e-35 Score=341.76 Aligned_cols=285 Identities=18% Similarity=0.221 Sum_probs=202.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||+|+||.||+|.+. +..+|+|+.. .........+ .+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~--~~~~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLS--RPFQSLIHAR----RTYRELRLLKHMKHENVIGLLDVFTPAT 87 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeC--chhhhhHHHH----HHHHHHHHHHhcCCCchhhhhhhhcccc
Confidence 357999999999999999999874 4456777643 2111111222 3368999999999999999999886433
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ......|++||++ +++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 88 ~~--------~~~~~~~~~~~~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~ 152 (343)
T cd07878 88 SI--------ENFNEVYLVTNLM-GADLNNIVKC------QKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVN 152 (343)
T ss_pred cc--------cccCcEEEEeecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEEC
Confidence 11 1233569999998 6899888753 3699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++...... .....||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 153 ~~-------~~~kl~Dfg~~~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el 209 (343)
T cd07878 153 ED-------CELRILDFGLARQADDE-------------MTGYVATRWYRAPEIMLN---WMHYNQTVDIWSVGCIMAEL 209 (343)
T ss_pred CC-------CCEEEcCCccceecCCC-------------cCCccccccccCchHhcC---CccCCchhhhHhHHHHHHHH
Confidence 87 78999999998754321 113468999999999875 23578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCch---hhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE---AELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
++|+.||.+....+....+.................................. .....++.+.+|+.+||+.||.+|
T Consensus 210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R 289 (343)
T cd07878 210 LKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKR 289 (343)
T ss_pred HHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhC
Confidence 99999998766655544442221111111111110000000000000000000 001234568899999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
||+.|+++|+|+..
T Consensus 290 ~s~~ell~hp~~~~ 303 (343)
T cd07878 290 ISASEALAHPYFSQ 303 (343)
T ss_pred CCHHHHhcCcchhc
Confidence 99999999999975
No 98
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=3.2e-36 Score=345.48 Aligned_cols=263 Identities=23% Similarity=0.281 Sum_probs=205.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||+||+|++. +..+|+|+.+..... .... ...+.+|+.+++.++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~----~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~- 74 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLL-AQET----VSFFEEERDILSISNSPWIPQLQYAFQDKD- 74 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhh-hhhH----HHHHHHHHHHHHhCCCCCCcceeeEEecCC-
Confidence 46899999999999999999974 566788876532110 1112 223478999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.+. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~ 137 (330)
T cd05601 75 -------------NLYLVMEYQPGGDLLSLLNRY----EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDR 137 (330)
T ss_pred -------------eEEEEECCCCCCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECC
Confidence 349999999999999999762 246999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC--CCCCCchhhHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK--PNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~~~~s~ksDVWSLGviL~E 1041 (1141)
+ +.+||+|||++..+...... ......||+.|+|||++..... ...++.++|||||||++|+
T Consensus 138 ~-------~~~kL~Dfg~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~e 201 (330)
T cd05601 138 T-------GHIKLADFGSAARLTANKMV---------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYE 201 (330)
T ss_pred C-------CCEEeccCCCCeECCCCCce---------eeecccCCccccCHHHhccccccccCCCCCcceeecccceeee
Confidence 7 78999999999765432111 1123468999999999864221 2457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++|+.||...........+..... ...+. ....+..+.+|+..||+ +|.+||
T Consensus 202 l~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~~~~~~~~li~~ll~-~p~~R~ 255 (330)
T cd05601 202 MIYGRSPFHEGTSAKTYNNIMNFQRFLKFPE-------------------------DPKVSSDFLDLIQSLLC-GQKERL 255 (330)
T ss_pred eccCCCCCCCCCHHHHHHHHHcCCCccCCCC-------------------------CCCCCHHHHHHHHHHcc-ChhhCC
Confidence 9999999987766665555533211 10000 01345678999999998 999999
Q ss_pred CHHHHHHHHHhhc
Q 001143 1121 TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~ 1133 (1141)
++.++++|+|+..
T Consensus 256 t~~~l~~h~~~~~ 268 (330)
T cd05601 256 GYEGLCCHPFFSK 268 (330)
T ss_pred CHHHHhCCCCcCC
Confidence 9999999999864
No 99
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=1.2e-35 Score=347.32 Aligned_cols=265 Identities=21% Similarity=0.292 Sum_probs=204.9
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+|++.+.||+|+||.||+|++. +..+|+|+...... ...... ..+.+|+.+++.++||||+++++.+.+.
T Consensus 41 ~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~-~~~~~~----~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 41 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM-IKRSDS----AFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred chhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh-hhhHHH----HHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 3578999999999999999999985 45567776432111 011111 2347899999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||++||+|.+++.. ..+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 116 ~--------------~~~lv~Ey~~gg~L~~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll 175 (371)
T cd05622 116 R--------------YLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 175 (371)
T ss_pred C--------------EEEEEEcCCCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE
Confidence 4 35999999999999999875 258899999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||++..+..... .......||+.|+|||++.+......++.++|||||||++||
T Consensus 176 ~~~-------~~ikL~DfG~a~~~~~~~~---------~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilye 239 (371)
T cd05622 176 DKS-------GHLKLADFGTCMKMNKEGM---------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 239 (371)
T ss_pred CCC-------CCEEEEeCCceeEcCcCCc---------ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHH
Confidence 887 7899999999976532111 111245699999999999764333457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE-- 1118 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~-- 1118 (1141)
|++|+.||.+.+.......+..... ..++. ....+..+.++|..||..++.+
T Consensus 240 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~~s~~~~~li~~~L~~~~~r~~ 294 (371)
T cd05622 240 MLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-------------------------DNDISKEAKNLICAFLTDREVRLG 294 (371)
T ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCcccCCC-------------------------cCCCCHHHHHHHHHHcCChhhhcC
Confidence 9999999998777666666543221 11110 0145667899999999844443
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
|+++.++++|+|+...
T Consensus 295 r~~~~ei~~h~~~~~~ 310 (371)
T cd05622 295 RNGVEEIKRHLFFKND 310 (371)
T ss_pred CCCHHHHhcCcccCCC
Confidence 7899999999998653
No 100
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.8e-35 Score=342.94 Aligned_cols=260 Identities=22% Similarity=0.304 Sum_probs=197.9
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+.+|++.++||+|+||.||+|++. +..+|+|+..... ... ....+.+|++++++++|+||+++++++.
T Consensus 70 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 142 (353)
T PLN00034 70 AKSLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH---EDT----VRRQICREIEILRDVNHPNVVKCHDMFD 142 (353)
T ss_pred CCCHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC---cHH----HHHHHHHHHHHHHhCCCCCcceeeeEec
Confidence 345678999999999999999999984 5678888753221 112 2233489999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.+ ..++||||+++++|.+. ...++..+..++.||+.||.|||++||+||||||+||
T Consensus 143 ~~~--------------~~~lv~e~~~~~~L~~~---------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI 199 (353)
T PLN00034 143 HNG--------------EIQVLLEFMDGGSLEGT---------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNL 199 (353)
T ss_pred cCC--------------eEEEEEecCCCCccccc---------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHE
Confidence 654 34999999999998643 2356788889999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC-CCCCCchhhHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-PNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~~~~s~ksDVWSLGvi 1038 (1141)
|++.+ +.+||+|||+++.+..... ......||..|+|||++..... ....+.++|||||||+
T Consensus 200 ll~~~-------~~~kL~DfG~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvi 262 (353)
T PLN00034 200 LINSA-------KNVKIADFGVSRILAQTMD----------PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVS 262 (353)
T ss_pred EEcCC-------CCEEEcccccceecccccc----------cccccccCccccCccccccccccCcCCCcchhHHHHHHH
Confidence 99887 7899999999876543211 1123468999999998754221 2334579999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHH---HHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1039 LLELLTLQVPYMGLSELEIH---DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~---~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
+|||++|+.||......+.. ..+.....+. .....+.++.+||.+||+.|
T Consensus 263 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~li~~~l~~~ 315 (353)
T PLN00034 263 ILEFYLGRFPFGVGRQGDWASLMCAICMSQPPE---------------------------APATASREFRHFISCCLQRE 315 (353)
T ss_pred HHHHHhCCCCCCCCCCccHHHHHHHHhccCCCC---------------------------CCCccCHHHHHHHHHHccCC
Confidence 99999999999743222211 1111111111 01145667999999999999
Q ss_pred CCCCCCHHHHHHHHHhhcCC
Q 001143 1116 PTERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~~~s 1135 (1141)
|++|||+.|+++|+|+....
T Consensus 316 P~~Rpt~~ell~hp~~~~~~ 335 (353)
T PLN00034 316 PAKRWSAMQLLQHPFILRAQ 335 (353)
T ss_pred hhhCcCHHHHhcCcccccCC
Confidence 99999999999999998764
No 101
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=8.9e-36 Score=346.37 Aligned_cols=267 Identities=20% Similarity=0.233 Sum_probs=203.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|.+. +..+|+|+...... ........+..|+.++..++||||+++++.+.+..
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~- 74 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM-----LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR- 74 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH-----hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-
Confidence 46899999999999999999984 56678887542211 11112234478999999999999999999988655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+.++||||++||+|.+++.+ ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~ 136 (360)
T cd05627 75 -------------NLYLIMEFLPGGDMMTLLMK-----KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDA 136 (360)
T ss_pred -------------EEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECC
Confidence 34999999999999999975 346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccc-------------------------cCCCCCCCCccCCCcccchhhhc
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-------------------------HRGIPAPDVCVGTPRWMAPEVLR 1018 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-------------------------~~~~~~~~~~~GT~~Y~APE~l~ 1018 (1141)
+ +.+||+|||++..+.......... ..........+||+.|+|||++.
T Consensus 137 ~-------~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~ 209 (360)
T cd05627 137 K-------GHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM 209 (360)
T ss_pred C-------CCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc
Confidence 7 789999999987543211100000 00000111346999999999987
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhh
Q 001143 1019 AMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1097 (1141)
Q Consensus 1019 ~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1141)
+ ..++.++|||||||++|||++|+.||.+....+....+..... ..++. .
T Consensus 210 ~----~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~ 260 (360)
T cd05627 210 Q----TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPP-------------------------E 260 (360)
T ss_pred C----CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCC-------------------------C
Confidence 6 5678999999999999999999999988777666655543211 10000 0
Q ss_pred hhhHHHHHHHHHHhcccCCCCCC---CHHHHHHHHHhhc
Q 001143 1098 LETLSFLVDVFRRCTEENPTERP---TAGDLYEMFVART 1133 (1141)
Q Consensus 1098 ~~~~~~L~dLI~~cL~~DP~~RP---Sa~ElL~~L~~~~ 1133 (1141)
...+.++.++|.+|+ .||.+|+ ++.++++|+|+..
T Consensus 261 ~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~ 298 (360)
T cd05627 261 VPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEG 298 (360)
T ss_pred CCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCC
Confidence 034567889999877 4999998 5899999999875
No 102
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.5e-35 Score=338.64 Aligned_cols=249 Identities=26% Similarity=0.339 Sum_probs=197.3
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
+.||+|+||+||+|++. +..+|+|+.+..... ...... .+..|..++..+ +||||+++++++...+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~----~~~~e~~il~~~~~h~~i~~~~~~~~~~~------ 69 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVIL-QDDDVE----CTMTEKRVLALAGKHPFLTQLHSCFQTKD------ 69 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHH----HHHHHHHHHHhccCCCCccceeeEEEcCC------
Confidence 47999999999999984 456888876532211 111222 236888899888 6999999999987654
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
+.++||||+++++|..++.+ ...+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 70 --------~~~lv~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~---- 132 (318)
T cd05570 70 --------RLFFVMEYVNGGDLMFHIQR-----SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSE---- 132 (318)
T ss_pred --------EEEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCC----
Confidence 35999999999999998876 2469999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||++....... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~----------~~~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslGvil~~l~~G~~p 195 (318)
T cd05570 133 ---GHIKIADFGMCKEGILGG----------VTTSTFCGTPDYIAPEILSY----QPYGPAVDWWALGVLLYEMLAGQSP 195 (318)
T ss_pred ---CcEEecccCCCeecCcCC----------CcccceecCccccCHHHhcC----CCCCcchhhhhHHHHHHHHhhCCCC
Confidence 789999999986422111 01123458999999999976 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH-----H
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA-----G 1123 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa-----~ 1123 (1141)
|.+.+..+....+..... ..+ ...+..+.+++.+||+.||.+||++ .
T Consensus 196 f~~~~~~~~~~~i~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~ 247 (318)
T cd05570 196 FEGDDEDELFQSILEDEV-RYP---------------------------RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQ 247 (318)
T ss_pred CCCCCHHHHHHHHHcCCC-CCC---------------------------CcCCHHHHHHHHHHccCCHHHcCCCCCCCHH
Confidence 988776666655533221 110 1345678999999999999999999 9
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
++++|+|+..
T Consensus 248 ~ll~~~~~~~ 257 (318)
T cd05570 248 DIKGHPFFRE 257 (318)
T ss_pred HHhcCCCcCC
Confidence 9999999865
No 103
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=3.9e-36 Score=343.16 Aligned_cols=248 Identities=24% Similarity=0.292 Sum_probs=197.5
Q ss_pred eeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~-----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
+.||+|+||.||++++ .+..+|+|+...... ..... .++..|+.++++++||||+++++++.+..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~--~~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~---- 71 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL--KVRDR----VRTKMERDILAEVNHPFIVKLHYAFQTEG---- 71 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh--hhhhH----HHHHHHHHHHHhCCCCCcccEEEEEEcCC----
Confidence 6799999999999875 356788888653211 11111 23368999999999999999999988654
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
..|+||||+++++|.+++.+ ...+++..++.|+.||+.||.|||++||+||||||+|||++.+
T Consensus 72 ----------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~-- 134 (318)
T cd05582 72 ----------KLYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE-- 134 (318)
T ss_pred ----------EEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCC--
Confidence 34999999999999999865 3468999999999999999999999999999999999999887
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1046 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk 1046 (1141)
+.+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|++|+
T Consensus 135 -----~~~kL~Dfg~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslG~il~el~tg~ 195 (318)
T cd05582 135 -----GHIKLTDFGLSKESIDHEK----------KAYSFCGTVEYMAPEVVNR----RGHTQSADWWSFGVLMFEMLTGS 195 (318)
T ss_pred -----CcEEEeeccCCcccCCCCC----------ceecccCChhhcCHHHHcC----CCCCCccceeccceEeeeeccCC
Confidence 7899999999865432110 1123468999999999876 45688999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC-----
Q 001143 1047 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT----- 1121 (1141)
Q Consensus 1047 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS----- 1121 (1141)
.||......+....+...... ++ ...++.+.+++.+||+.||.+||+
T Consensus 196 ~p~~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~l~~~P~~R~~a~~~~ 247 (318)
T cd05582 196 LPFQGKDRKETMTMILKAKLG-MP---------------------------QFLSPEAQSLLRALFKRNPANRLGAGPDG 247 (318)
T ss_pred CCCCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHhHcCCCCCCC
Confidence 999887766666555432211 00 134567899999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001143 1122 AGDLYEMFVART 1133 (1141)
Q Consensus 1122 a~ElL~~L~~~~ 1133 (1141)
+.+++.|+|+..
T Consensus 248 ~~~~~~~~~~~~ 259 (318)
T cd05582 248 VEEIKRHPFFST 259 (318)
T ss_pred HHHHhCCCCcCC
Confidence 778999988753
No 104
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.2e-35 Score=321.52 Aligned_cols=251 Identities=25% Similarity=0.382 Sum_probs=198.4
Q ss_pred CCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..+|++.+.||+|+||.||+|.+.. ..+++|... ..... ...+ .+|+.++++++||||+++++++.....
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~--~~~~~---~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~ 73 (256)
T cd05114 3 PSELTFMKELGSGQFGVVHLGKWRAQIKVAIKAIN--EGAMS---EEDF----IEEAKVMMKLSHPKLVQLYGVCTQQKP 73 (256)
T ss_pred HHHcEEeeEecCCcCceEEEEEeccCceEEEEecc--cCCcc---HHHH----HHHHHHHHHCCCCCceeEEEEEccCCC
Confidence 4568999999999999999999854 366777533 21111 2233 789999999999999999999876543
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++++|.++++.. ...+++..++.++.|++.||.|||++||+||||||+||+++.
T Consensus 74 --------------~~iv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~ 135 (256)
T cd05114 74 --------------LYIVTEFMENGCLLNYLRQR----QGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSS 135 (256)
T ss_pred --------------EEEEEEcCCCCcHHHHHHhC----ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcC
Confidence 49999999999999998751 235899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.++........ ......++..|+|||++.+ ..++.++||||||+++|+|+
T Consensus 136 ~-------~~~kl~d~g~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~s~G~~l~el~ 195 (256)
T cd05114 136 T-------GVVKVSDFGMTRYVLDDEYT---------SSSGAKFPVKWSPPEVFNF----SKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred C-------CeEEECCCCCccccCCCcee---------ccCCCCCchhhCChhhccc----CccchhhhhHHHHHHHHHHH
Confidence 7 78999999998754321111 1112235678999999875 45788999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |+.||...+..+....+..+..+..+. ..+..+.+++.+||+.||.+||++
T Consensus 196 ~~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~~~~li~~c~~~~p~~Rps~ 248 (256)
T cd05114 196 TEGKMPFEKKSNYEVVEMISRGFRLYRPK---------------------------LASMTVYEVMYSCWHEKPEGRPTF 248 (256)
T ss_pred cCCCCCCCCCCHHHHHHHHHCCCCCCCCC---------------------------CCCHHHHHHHHHHccCCcccCcCH
Confidence 9 899998877777766665543322111 234568999999999999999999
Q ss_pred HHHHHHH
Q 001143 1123 GDLYEMF 1129 (1141)
Q Consensus 1123 ~ElL~~L 1129 (1141)
.++++.+
T Consensus 249 ~~l~~~l 255 (256)
T cd05114 249 AELLRAI 255 (256)
T ss_pred HHHHHhh
Confidence 9999864
No 105
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1e-35 Score=340.83 Aligned_cols=248 Identities=24% Similarity=0.304 Sum_probs=192.3
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHhhCCCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
+.||+|+||+||+|++. +..+|+|+........ ..... .+..|.. +++.++||||+++++++...+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~----~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~------ 69 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILK-KKEEK----HIMSERNVLLKNVKHPFLVGLHFSFQTAD------ 69 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHh-hhHHH----HHHHHHHHHHHhCCCCCCCceeEEEEcCC------
Confidence 47999999999999984 4567888764321111 11111 2234444 567789999999999987655
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~---- 132 (325)
T cd05602 70 --------KLYFVLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ---- 132 (325)
T ss_pred --------eEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----
Confidence 34999999999999999875 3468899999999999999999999999999999999999877
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kl~DfG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~p 195 (325)
T cd05602 133 ---GHIVLTDFGLCKENIEHN----------GTTSTFCGTPEYLAPEVLHK----QPYDRTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred ---CCEEEccCCCCcccccCC----------CCcccccCCccccCHHHHcC----CCCCCccccccccHHHHHHhcCCCC
Confidence 789999999986432211 01224469999999999876 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH----H
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG----D 1124 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~----E 1124 (1141)
|.+.+..+....+....... ....+..+.+++.+||+.||.+||++. +
T Consensus 196 f~~~~~~~~~~~i~~~~~~~----------------------------~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 196 FYSRNTAEMYDNILNKPLQL----------------------------KPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred CCCCCHHHHHHHHHhCCcCC----------------------------CCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 98877766665553321110 014456789999999999999999875 8
Q ss_pred HHHHHHhh
Q 001143 1125 LYEMFVAR 1132 (1141)
Q Consensus 1125 lL~~L~~~ 1132 (1141)
+++|+|+.
T Consensus 248 i~~~~~~~ 255 (325)
T cd05602 248 IKNHIFFS 255 (325)
T ss_pred HhcCcccC
Confidence 88888874
No 106
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.8e-35 Score=332.18 Aligned_cols=259 Identities=22% Similarity=0.291 Sum_probs=199.5
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|++.++||+|+||.||++.+. +..+|+|+...... ... .....+.+|+.+++.++||||+++++.+...+
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~---~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-- 73 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKR---KGEAMALNEKQILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhh--hhh---hhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC--
Confidence 4889999999999999999974 56677776532211 111 11223468999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
+.++||||+++++|.+++.. .....+++..+..++.||+.||.|||+.||+||||||+||+++.+
T Consensus 74 ------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~ 138 (285)
T cd05605 74 ------------ALCLVLTLMNGGDLKFHIYN---MGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDY 138 (285)
T ss_pred ------------eEEEEEeccCCCcHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCC
Confidence 35999999999999998865 223468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||++....... ......|++.|+|||++.+ ..++.++||||+||++|+|++
T Consensus 139 -------~~~~l~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Diws~G~~l~el~~ 196 (285)
T cd05605 139 -------GHIRISDLGLAVEIPEGE-----------TIRGRVGTVGYMAPEVVKN----ERYTFSPDWWGLGCLIYEMIE 196 (285)
T ss_pred -------CCEEEeeCCCceecCCCC-----------ccccccCCCCccCcHHhcC----CCCCccccchhHHHHHHHHHH
Confidence 789999999987543211 0113358999999999875 567899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC----
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP---- 1120 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP---- 1120 (1141)
|+.||.+.........+........ .......+..+.+|+.+||..||.+||
T Consensus 197 g~~pf~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 252 (285)
T cd05605 197 GKSPFRQRKEKVKREEVERRVKEDQ------------------------EEYSEKFSEAARSICRQLLTKDPGFRLGCRG 252 (285)
T ss_pred CCCCCCCCchhhHHHHHHHHhhhcc------------------------cccCcccCHHHHHHHHHHccCCHHHhcCCCC
Confidence 9999987554332222211100000 000013456789999999999999999
Q ss_pred -CHHHHHHHHHhhc
Q 001143 1121 -TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 -Sa~ElL~~L~~~~ 1133 (1141)
++.++++|+|+..
T Consensus 253 ~~~~~l~~~~~~~~ 266 (285)
T cd05605 253 EGAEEVKAHPFFRT 266 (285)
T ss_pred CCHHHHhcCcCccC
Confidence 9999999999975
No 107
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1e-34 Score=318.99 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=200.8
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|++|.||+|.+. +..+++|....+ .......+. +.+|+.++++++|||++++++.+...+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLR--NASRRERKA----AEQEAQLLSQLKHPNIVAYRESWEGED-- 72 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehh--hcCHHHHHH----HHHHHHHHHhCCCCCeeeeeeeecCCC--
Confidence 4899999999999999999974 455777765432 112222223 378999999999999999998775322
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
...++||||+++++|.+++.. .....+++.+++.++.|++.|+.|||++||+||||||+||+++.+
T Consensus 73 -----------~~~~lv~e~~~~~~l~~~l~~---~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~ 138 (257)
T cd08223 73 -----------GLLYIVMGFCEGGDLYHKLKE---QKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRT 138 (257)
T ss_pred -----------CEEEEEecccCCCcHHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecC
Confidence 135899999999999999975 223468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+........ ......+++.|+|||++.+ ..++.++||||||+++++|++
T Consensus 139 -------~~~~l~df~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~~l~~ 197 (257)
T cd08223 139 -------NIIKVGDLGIARVLENQCD----------MASTLIGTPYYMSPELFSN----KPYNYKSDVWALGCCVYEMAT 197 (257)
T ss_pred -------CcEEEecccceEEecccCC----------ccccccCCcCccChhHhcC----CCCCchhhhHHHHHHHHHHHc
Confidence 7899999999876532110 1123458899999999876 567789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||...+.......+..+..+..+ ...++.+.+++.+||+.||.+|||+.+
T Consensus 198 g~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~ 250 (257)
T cd08223 198 LKHAFNAKDMNSLVYRIIEGKLPPMP---------------------------KDYSPELGELIATMLSKRPEKRPSVKS 250 (257)
T ss_pred CCCCCCCCCHHHHHHHHHhcCCCCCc---------------------------cccCHHHHHHHHHHhccCcccCCCHHH
Confidence 99999876655554444433322211 145567999999999999999999999
Q ss_pred HHHHHHh
Q 001143 1125 LYEMFVA 1131 (1141)
Q Consensus 1125 lL~~L~~ 1131 (1141)
+++|+|+
T Consensus 251 ~l~~~~~ 257 (257)
T cd08223 251 ILRQPYI 257 (257)
T ss_pred HhcCCCC
Confidence 9999885
No 108
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=9.5e-36 Score=341.17 Aligned_cols=249 Identities=25% Similarity=0.293 Sum_probs=194.2
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHhhCCCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
+.||+|+||.||+|++. +..+|+|+...+.... ..... .+..|.. +++.++||||+++++++...+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~-~~~~~----~~~~e~~~~l~~~~hp~iv~~~~~~~~~~------ 69 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLN-RKEQK----HIMAERNVLLKNVKHPFLVGLHYSFQTTE------ 69 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhh-hhHHH----HHHHHHHHHHHhCCCCCCccEEEEEecCC------
Confidence 46999999999999974 5678888865332111 11112 2245554 467789999999999988655
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..++||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~---- 132 (325)
T cd05604 70 --------KLYFVLDFVNGGELFFHLQR-----ERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ---- 132 (325)
T ss_pred --------EEEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCC----
Confidence 34999999999999988865 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~DfG~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslG~il~el~~G~~p 195 (325)
T cd05604 133 ---GHVVLTDFGLCKEGIAQS----------DTTTTFCGTPEYLAPEVIRK----QPYDNTVDWWCLGAVLYEMLYGLPP 195 (325)
T ss_pred ---CCEEEeecCCcccCCCCC----------CCcccccCChhhCCHHHHcC----CCCCCcCccccccceehhhhcCCCC
Confidence 789999999986432111 11124468999999999876 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH----HH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA----GD 1124 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa----~E 1124 (1141)
|...+..++...+........ ...+..+.+++.+||+.||.+||++ .+
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 196 FYCRDVAEMYDNILHKPLVLR----------------------------PGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred CCCCCHHHHHHHHHcCCccCC----------------------------CCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 988776666665543221100 0344568899999999999999976 58
Q ss_pred HHHHHHhhc
Q 001143 1125 LYEMFVART 1133 (1141)
Q Consensus 1125 lL~~L~~~~ 1133 (1141)
+++|+|+..
T Consensus 248 i~~h~~f~~ 256 (325)
T cd05604 248 IQEHPFFES 256 (325)
T ss_pred HhcCCCcCC
Confidence 999999864
No 109
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.7e-35 Score=329.94 Aligned_cols=255 Identities=21% Similarity=0.271 Sum_probs=192.9
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 814 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 814 LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
||+|+||+||++.+. +..+|+|........ ..... ..+..|+.++++++||||+++++++....
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~~~~~----~~~~~E~~il~~l~~~~i~~~~~~~~~~~--------- 66 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLK-KRKGY----EGAMVEKRILAKVHSRFIVSLAYAFQTKT--------- 66 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHh-hhHHH----HHHHHHHHHHHhCCCCcEeeeeEEEcCCC---------
Confidence 799999999999874 556777764322110 11111 23478999999999999999999887654
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 971 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~ 971 (1141)
+.++||||+++|+|..++..... ....+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 67 -----~~~lv~e~~~~g~L~~~~~~~~~-~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~------- 133 (280)
T cd05608 67 -----DLCLVMTIMNGGDLRYHIYNVDE-ENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDND------- 133 (280)
T ss_pred -----eEEEEEeCCCCCCHHHHHHhccc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC-------
Confidence 34999999999999988865322 23469999999999999999999999999999999999999877
Q ss_pred CeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001143 972 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1051 (1141)
Q Consensus 972 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~ 1051 (1141)
+.++|+|||++..+..... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 134 ~~~~l~dfg~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~----~~~~~~~DvwslG~il~el~~g~~pf~~ 199 (280)
T cd05608 134 GNVRISDLGLAVELKDGQS----------KTKGYAGTPGFMAPELLQG----EEYDFSVDYFALGVTLYEMIAARGPFRA 199 (280)
T ss_pred CCEEEeeCccceecCCCCc----------cccccCCCcCccCHHHhcC----CCCCccccHHHHHHHHHHHHhCCCCCCC
Confidence 7899999999875433111 1123468999999999986 5678999999999999999999999975
Q ss_pred CCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHHHH
Q 001143 1052 LSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAGDL 1125 (1141)
Q Consensus 1052 ~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-----Sa~El 1125 (1141)
.........+.. ...... ......+..+.+++.+||+.||++|| +++++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~ 254 (280)
T cd05608 200 RGEKVENKELKQRILNDSV-------------------------TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGL 254 (280)
T ss_pred CCcchhHHHHHHhhcccCC-------------------------CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHH
Confidence 432211111110 000000 00014566799999999999999999 88999
Q ss_pred HHHHHhhcC
Q 001143 1126 YEMFVARTS 1134 (1141)
Q Consensus 1126 L~~L~~~~~ 1134 (1141)
++|+|+...
T Consensus 255 l~h~~~~~~ 263 (280)
T cd05608 255 RTHPLFRDL 263 (280)
T ss_pred hcChhhhcC
Confidence 999999764
No 110
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.8e-35 Score=336.24 Aligned_cols=254 Identities=24% Similarity=0.325 Sum_probs=200.1
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 883 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~~ 883 (1141)
+|++.+.||+|+||.||+|.+. +..+|+|+....... .....+. +..|..++..+. |++|+++++++.+.+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~----~~~e~~~l~~~~~~~~i~~~~~~~~~~~- 74 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI-QDDDVEC----TMVEKRVLALQDKPPFLTQLHSCFQTVD- 74 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHHH----HHHHHHHHHhccCCCchhheeeEEecCC-
Confidence 4788999999999999999984 567888876532211 1112222 367888888885 678888998887654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..|+||||+++|+|.+++.. ...+++.++..|+.||+.||.|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~Ey~~~g~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~ 136 (323)
T cd05615 75 -------------RLYFVMEYVNGGDLMYHIQQ-----VGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDS 136 (323)
T ss_pred -------------EEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECC
Confidence 34999999999999999875 346999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 137 ~-------~~ikL~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~ell 195 (323)
T cd05615 137 E-------GHIKIADFGMCKEHMVDGV----------TTRTFCGTPDYIAPEIIAY----QPYGKSVDWWAYGVLLYEML 195 (323)
T ss_pred C-------CCEEEeccccccccCCCCc----------cccCccCCccccCHHHHcC----CCCCCccchhhhHHHHHHHH
Confidence 7 7899999999864322110 1123458999999999876 56789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC--
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT-- 1121 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS-- 1121 (1141)
+|+.||.+....+....+...... .+ ...+.++.+++.+||+.||.+|++
T Consensus 196 tG~~pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 196 AGQPPFDGEDEDELFQSIMEHNVS-YP---------------------------KSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------ccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 999999987776666665432211 10 034456899999999999999997
Q ss_pred ---HHHHHHHHHhhc
Q 001143 1122 ---AGDLYEMFVART 1133 (1141)
Q Consensus 1122 ---a~ElL~~L~~~~ 1133 (1141)
..++.+|+|+..
T Consensus 248 ~~~~~~i~~h~~f~~ 262 (323)
T cd05615 248 PEGERDIREHAFFRR 262 (323)
T ss_pred CCCHHHHhcCcccCC
Confidence 578999998875
No 111
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=1.8e-35 Score=339.80 Aligned_cols=249 Identities=22% Similarity=0.342 Sum_probs=191.5
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
++||+|+||.||+|++. +..+|+|+.+..... ...... .+..|..++.++ +||||+++++++.+..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~-~~~~~~----~~~~e~~il~~~~~hp~Iv~~~~~~~~~~------ 69 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVN-DDEDID----WVQTEKHVFETASNHPFLVGLHSCFQTES------ 69 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHH----HHHHHHHHHHhccCCCCCCceEEEEEcCC------
Confidence 47999999999999984 556788875432211 111222 347899999988 6999999999988655
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..|+||||+++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~g~L~~~~~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~---- 132 (329)
T cd05588 70 --------RLFFVIEFVSGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAE---- 132 (329)
T ss_pred --------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCC----
Confidence 34999999999999998865 3469999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~~l~el~~g~~P 195 (329)
T cd05588 133 ---GHIKLTDYGMCKEGIRPG----------DTTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGVLMFEMMAGRSP 195 (329)
T ss_pred ---CCEEECcCccccccccCC----------CccccccCCccccCHHHHcC----CCCCCccceechHHHHHHHHHCCCC
Confidence 789999999986422111 11123468999999999976 5678999999999999999999999
Q ss_pred CCCCCH--------HH-HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1049 YMGLSE--------LE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1049 f~~~~~--------~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|..... .+ ....+.... ..++ ...+..+.+++.+||+.||.+|
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p---------------------------~~~~~~~~~li~~~L~~dP~~R 247 (329)
T cd05588 196 FDIVGMSDNPDQNTEDYLFQVILEKQ-IRIP---------------------------RSLSVKASSVLKGFLNKDPKER 247 (329)
T ss_pred cccccccccccccchHHHHHHHHcCC-CCCC---------------------------CCCCHHHHHHHHHHhccCHHHc
Confidence 963211 11 112111111 1100 1345678999999999999999
Q ss_pred CC------HHHHHHHHHhhc
Q 001143 1120 PT------AGDLYEMFVART 1133 (1141)
Q Consensus 1120 PS------a~ElL~~L~~~~ 1133 (1141)
|+ ++++++|+|+..
T Consensus 248 ~~~~~~~~~~~i~~hp~~~~ 267 (329)
T cd05588 248 LGCHPQTGFRDIKSHPFFRN 267 (329)
T ss_pred CCCCCCCCHHHHhcCCCCCC
Confidence 87 799999999964
No 112
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=341.77 Aligned_cols=265 Identities=27% Similarity=0.378 Sum_probs=196.2
Q ss_pred CCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
++|.-..+||+|+||.||+|...+ ..+|||. +....... .++| .+|+.++.+++|||+|+++|||.+.+.
T Consensus 75 ~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~--~~~~~~~~--~~eF----~~Ei~~ls~l~H~Nlv~LlGyC~e~~~- 145 (361)
T KOG1187|consen 75 NNFSESNLIGEGGFGTVYKGVLSDGTVVAVKR--LSSNSGQG--EREF----LNEVEILSRLRHPNLVKLLGYCLEGGE- 145 (361)
T ss_pred hCCchhcceecCCCeEEEEEEECCCCEEEEEE--ecCCCCcc--hhHH----HHHHHHHhcCCCcCcccEEEEEecCCc-
Confidence 457777899999999999999866 6777774 33322221 2335 899999999999999999999987541
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCCCCeee
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---HIMHRDIKSENILI 961 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~---gIvHrDLKP~NILl 961 (1141)
+.+||+||+++|+|.++++.. ... +++|..+.+|+.++|+||+|||.. .||||||||+|||+
T Consensus 146 ------------~~~LVYEym~nGsL~d~L~~~--~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL 210 (361)
T KOG1187|consen 146 ------------HRLLVYEYMPNGSLEDHLHGK--KGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL 210 (361)
T ss_pred ------------eEEEEEEccCCCCHHHHhCCC--CCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE
Confidence 359999999999999999862 111 789999999999999999999975 49999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccc-cccccccccCCCCCCCCc-cCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRS-FLHTCCIAHRGIPAPDVC-VGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~-~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|.+ +++||+|||+|+.... ... .... .||.+|+|||++.. ...+.|+|||||||++
T Consensus 211 D~~-------~~aKlsDFGLa~~~~~~~~~-----------~~~~~~gt~gY~~PEy~~~----g~lt~KsDVySFGVvl 268 (361)
T KOG1187|consen 211 DED-------FNAKLSDFGLAKLGPEGDTS-----------VSTTVMGTFGYLAPEYAST----GKLTEKSDVYSFGVVL 268 (361)
T ss_pred CCC-------CCEEccCccCcccCCccccc-----------eeeecCCCCccCChhhhcc----CCcCcccccccchHHH
Confidence 988 8999999999965432 110 0111 69999999999975 5678999999999999
Q ss_pred HHHHhCCCCCCCCC---HHHHHH----HHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001143 1040 LELLTLQVPYMGLS---ELEIHD----LIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1112 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~---~~el~~----~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL 1112 (1141)
+||+||+.|..... ...+.. .+..+. +.. +.+..... ...........+..+..+|+
T Consensus 269 lElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~---~~e------------iiD~~l~~-~~~~~~~~~~~~~~~a~~C~ 332 (361)
T KOG1187|consen 269 LELITGRKAVDQSRPRGELSLVEWAKPLLEEGK---LRE------------IVDPRLKE-GEYPDEKEVKKLAELALRCL 332 (361)
T ss_pred HHHHhCCcccCCCCCcccccHHHHHHHHHHCcc---hhh------------eeCCCccC-CCCChHHHHHHHHHHHHHHc
Confidence 99999998876422 111111 111111 111 11111000 00000134556888899999
Q ss_pred ccCCCCCCCHHHHHHHHHhh
Q 001143 1113 EENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1113 ~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
+.+|.+||+|.||++.+...
T Consensus 333 ~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 333 RPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred CcCCCcCcCHHHHHHHHHhh
Confidence 99999999999999988443
No 113
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=7.1e-35 Score=334.06 Aligned_cols=290 Identities=19% Similarity=0.223 Sum_probs=199.6
Q ss_pred Eeeeeccc--CceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 810 SCDEAGKS--VSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 810 i~~~LG~G--sfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
+.++||+| +||+||++++. +..+|+|....+ .......+ .+.+|+.+++.++||||+++++++..++.
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~----~~~~e~~~l~~l~hpniv~~~~~~~~~~~-- 73 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLE--ACTNEMVT----FLQGELHVSKLFNHPNIVPYRATFIADNE-- 73 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechh--hccHHHHH----HHHHHHHHHHhcCCCCeeeEEEEEEECCE--
Confidence 56789999 77899999985 455666654322 22222222 34789999999999999999999987653
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
.++||||+++++|.+++... ....+++..++.++.||+.||+|||+++|+||||||+|||++.+
T Consensus 74 ------------~~lv~e~~~~~~l~~~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~- 137 (327)
T cd08227 74 ------------LWVVTSFMAYGSAKDLICTH---FMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVD- 137 (327)
T ss_pred ------------EEEEEeccCCCcHHHHHHhh---ccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecC-
Confidence 49999999999999999652 22358999999999999999999999999999999999999887
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.++++||+.+............ .........++..|+|||++.+. ...++.++|||||||++|+|++|
T Consensus 138 ------~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~~DiwslG~il~el~~g 206 (327)
T cd08227 138 ------GKVYLSGLRSNLSMINHGQRLRV---VHDFPKYSVKVLPWLSPEVLQQN--LQGYDAKSDIYSVGITACELANG 206 (327)
T ss_pred ------CcEEEcccchhhccccccccccc---cccccccccceecccChHHhhcc--cCCCCchhhHHHHHHHHHHHHHC
Confidence 78999999876543221110000 00112234577889999998752 13578999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcc--------C-ccccccc------cCC---CCCCchhhhhhHHHHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGS--------C-HEHEVAQ------SGS---GFEKPEAELETLSFLVDV 1107 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~--------~-~~~~~~~------~~~---~~~~~~~~~~~~~~L~dL 1107 (1141)
+.||......+.......+..+...+....... . ....... ... ...........++.+.+|
T Consensus 207 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 286 (327)
T cd08227 207 HVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHF 286 (327)
T ss_pred CCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHH
Confidence 999986555443333333322211110000000 0 0000000 000 000000112446789999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
+.+||+.||++|||++|+++|+|++.-
T Consensus 287 i~~~l~~dP~~Rpt~~ell~~p~f~~~ 313 (327)
T cd08227 287 VEQCLQRNPDARPSASTLLNHSFFKQI 313 (327)
T ss_pred HHHHHhhCchhcCCHHHHhcChhhhhc
Confidence 999999999999999999999999753
No 114
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1e-34 Score=329.12 Aligned_cols=263 Identities=25% Similarity=0.418 Sum_probs=200.6
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~ 878 (1141)
-..+.+|++.+.||+|+||.||+|.+. +..++++++..+.. ........ +.+|+.++.++ +||||+++++++
T Consensus 3 ~~~~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~----~~~Ei~~l~~l~~h~~iv~~~~~~ 77 (303)
T cd05088 3 VLEWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRD----FAGELEVLCKLGHHPNIINLLGAC 77 (303)
T ss_pred ccchhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHH----HHHHHHHHHHhcCCCCcceEEEEE
Confidence 345788999999999999999999974 34455555544321 12222333 37899999999 899999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-----------cCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELHSK 947 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-----------~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~ 947 (1141)
..... .++||||+++++|.++++.... .....+++..++.++.||+.||+|||++
T Consensus 78 ~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 143 (303)
T cd05088 78 EHRGY--------------LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK 143 (303)
T ss_pred CCCCC--------------ceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 76553 3999999999999999975321 1123589999999999999999999999
Q ss_pred CccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCC
Q 001143 948 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYG 1027 (1141)
Q Consensus 948 gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s 1027 (1141)
||+||||||+|||++.+ +.+||+|||++....... ......++..|+|||++.+ ..++
T Consensus 144 gi~H~dlkp~Nili~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~ 201 (303)
T cd05088 144 QFIHRDLAARNILVGEN-------YVAKIADFGLSRGQEVYV-----------KKTMGRLPVRWMAIESLNY----SVYT 201 (303)
T ss_pred CccccccchheEEecCC-------CcEEeCccccCcccchhh-----------hcccCCCcccccCHHHHhc----cCCc
Confidence 99999999999999887 789999999985321100 0111234667999999865 4578
Q ss_pred chhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHH
Q 001143 1028 LEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVD 1106 (1141)
Q Consensus 1028 ~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~d 1106 (1141)
.++|||||||++|+|+| |..||......+....+.....+..+ ...+..+.+
T Consensus 202 ~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~ 254 (303)
T cd05088 202 TNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP---------------------------LNCDDEVYD 254 (303)
T ss_pred ccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCcCCCC---------------------------CCCCHHHHH
Confidence 99999999999999998 99999876665555544322111100 134456899
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1107 VFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1107 LI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
++.+||+.+|.+||++.+++.++...
T Consensus 255 li~~~l~~~p~~Rp~~~~il~~l~~~ 280 (303)
T cd05088 255 LMRQCWREKPYERPSFAQILVSLNRM 280 (303)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 99999999999999999999987653
No 115
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.6e-35 Score=338.57 Aligned_cols=248 Identities=26% Similarity=0.295 Sum_probs=192.1
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHhhCCCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
++||+|+||.||+|++. +..+|+|+....... ..... ..+..|.. +++.++||||+++++++.+.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~----~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~------ 69 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL-KKKEQ----NHIMAERNVLLKNLKHPFLVGLHYSFQTAE------ 69 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH-HhhHH----HHHHHHHHHHHHhCCCCCccceeeEEEcCC------
Confidence 47999999999999984 566888875432111 11111 22345554 577889999999999987654
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..|+||||+++++|..++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 70 --------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~---- 132 (321)
T cd05603 70 --------KLYFVLDYVNGGELFFHLQR-----ERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQ---- 132 (321)
T ss_pred --------EEEEEEcCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC----
Confidence 34999999999999988865 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~p 195 (321)
T cd05603 133 ---GHVVLTDFGLCKEGVEPE----------ETTSTFCGTPEYLAPEVLRK----EPYDRTVDWWCLGAVLYEMLYGLPP 195 (321)
T ss_pred ---CCEEEccCCCCccCCCCC----------CccccccCCcccCCHHHhcC----CCCCCcCcccccchhhhhhhcCCCC
Confidence 789999999986432111 11123468999999999875 5678999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH----HH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA----GD 1124 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa----~E 1124 (1141)
|.+.+..++...+..... .++ ...+..+.+++.+||+.||.+||++ .+
T Consensus 196 f~~~~~~~~~~~i~~~~~-~~~---------------------------~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (321)
T cd05603 196 FYSRDVSQMYDNILHKPL-QLP---------------------------GGKTVAACDLLVGLLHKDQRRRLGAKADFLE 247 (321)
T ss_pred CCCCCHHHHHHHHhcCCC-CCC---------------------------CCCCHHHHHHHHHHccCCHhhcCCCCCCHHH
Confidence 988776666655543221 110 1344568999999999999999875 58
Q ss_pred HHHHHHhh
Q 001143 1125 LYEMFVAR 1132 (1141)
Q Consensus 1125 lL~~L~~~ 1132 (1141)
+++|+|+.
T Consensus 248 ~~~~~~~~ 255 (321)
T cd05603 248 IKNHVFFS 255 (321)
T ss_pred HhCCCCcC
Confidence 99988875
No 116
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.6e-35 Score=342.00 Aligned_cols=260 Identities=25% Similarity=0.370 Sum_probs=197.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg 876 (1141)
.++|++.++||+|+||.||+|++. +..+|+|+.+.. . .....+ .+.+|+.++..+ +||||+++++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~--~-~~~~~~----~~~~Ei~il~~l~~HpnIv~l~~ 106 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPS--A-HLTERE----ALMSELKVLSYLGNHINIVNLLG 106 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCC--c-CcHHHH----HHHHHHHHHHHhcCCcceeeeee
Confidence 457999999999999999999752 335777764321 1 122223 347899999999 7999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-------------------------------------
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE------------------------------------- 919 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~------------------------------------- 919 (1141)
++.+... .++||||+++|+|.++++....
T Consensus 107 ~~~~~~~--------------~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 172 (375)
T cd05104 107 ACTVGGP--------------TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMK 172 (375)
T ss_pred eeccCCc--------------ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcC
Confidence 9876553 3999999999999999975211
Q ss_pred ---------------------------------cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 920 ---------------------------------TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 920 ---------------------------------~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
.....+++..+..|+.||+.||.|||++||+||||||+|||++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~-- 250 (375)
T cd05104 173 PGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHG-- 250 (375)
T ss_pred CCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECC--
Confidence 012357889999999999999999999999999999999999876
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-C
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-L 1045 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-G 1045 (1141)
+.+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||++|||++ |
T Consensus 251 -----~~~kl~DfG~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~sDi~slG~~l~ellt~g 313 (375)
T cd05104 251 -----RITKICDFGLARDIRNDSNY--------VVKGNARLPVKWMAPESIFN----CVYTFESDVWSYGILLWEIFSLG 313 (375)
T ss_pred -----CcEEEecCccceeccCcccc--------cccCCCCCCcceeChhHhcC----CCCCCCCCHHHHHHHHHHHHhcC
Confidence 78999999999765332111 01112235678999999876 568899999999999999998 8
Q ss_pred CCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1046 QVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1046 k~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
..||....... ....+..+..+..+ ...+.++.+|+.+||+.||++||++.|
T Consensus 314 ~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dP~~RPs~~e 366 (375)
T cd05104 314 SSPYPGMPVDSKFYKMIKEGYRMLSP---------------------------ECAPSEMYDIMKSCWDADPLKRPTFKQ 366 (375)
T ss_pred CCCCCCCCchHHHHHHHHhCccCCCC---------------------------CCCCHHHHHHHHHHccCChhHCcCHHH
Confidence 99997654332 33333322211100 023457999999999999999999999
Q ss_pred HHHHHHh
Q 001143 1125 LYEMFVA 1131 (1141)
Q Consensus 1125 lL~~L~~ 1131 (1141)
|++.+..
T Consensus 367 il~~l~~ 373 (375)
T cd05104 367 IVQLIEQ 373 (375)
T ss_pred HHHHHHh
Confidence 9998874
No 117
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.2e-34 Score=320.74 Aligned_cols=264 Identities=28% Similarity=0.381 Sum_probs=203.4
Q ss_pred CceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+|.+...||+|++|.||+|.+ .+..+++|.......... ......+...+.+|+.++++++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 477889999999999999987 456788887544332222 12222333456899999999999999999999886554
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++++|.+++.. ...+++..+..++.|++.||+|||++|++||||+|+||+++.
T Consensus 81 --------------~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~ 141 (267)
T cd06628 81 --------------LNIFLEYVPGGSVAALLNN-----YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDN 141 (267)
T ss_pred --------------cEEEEEecCCCCHHHHHHh-----ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcC
Confidence 3999999999999999976 246899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||.++.......... .........|+..|+|||.+.+ ..++.++|||||||++|+|+
T Consensus 142 ~-------~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~~~~y~~pe~~~~----~~~~~~~Dv~slG~il~~l~ 206 (267)
T cd06628 142 K-------GGIKISDFGISKKLEANSLSTK----TNGARPSLQGSVFWMAPEVVKQ----TSYTRKADIWSLGCLVVEML 206 (267)
T ss_pred C-------CCEEecccCCCcccccccccCC----ccccccccCCCcCccChhHhcc----CCCCchhhhHHHHHHHHHHh
Confidence 7 7899999999976643211100 0011123458889999999876 45778999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|+.||...........+.....+..+ ...+..+.+++.+||+.||.+||++.
T Consensus 207 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 259 (267)
T cd06628 207 TGKHPFPDCTQLQAIFKIGENASPEIP---------------------------SNISSEAIDFLEKTFEIDHNKRPTAA 259 (267)
T ss_pred hCCCCCCCccHHHHHHHHhccCCCcCC---------------------------cccCHHHHHHHHHHccCCchhCcCHH
Confidence 999999875544433333222222111 13456789999999999999999999
Q ss_pred HHHHHHHh
Q 001143 1124 DLYEMFVA 1131 (1141)
Q Consensus 1124 ElL~~L~~ 1131 (1141)
|+++|+|+
T Consensus 260 ~il~~~~~ 267 (267)
T cd06628 260 ELLKHPFL 267 (267)
T ss_pred HHhhCCCC
Confidence 99999885
No 118
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.9e-34 Score=319.85 Aligned_cols=264 Identities=20% Similarity=0.331 Sum_probs=199.2
Q ss_pred ceEeeeecccCceEEEEEEECCc----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSA----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~----~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
|.+.++||+|+||.||+|.+... .+|+|..+.. .......+.+ .+|+.+++.++||||+++++++.....
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~~ 74 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIA--ICTRSEMEDF----LSEAVCMKEFDHPNVMRLIGVCLQTVE 74 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccC--cCCHHHHHHH----HHHHHHHHhCCCCCcceEEEEEccCCc
Confidence 45789999999999999997543 3566654332 2223333444 789999999999999999998754321
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. ......++||||+++++|.+++..... .....+++..+..++.||+.||+|||+++|+||||||+|||++
T Consensus 75 ~--------~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~ 146 (272)
T cd05075 75 S--------EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN 146 (272)
T ss_pred c--------cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc
Confidence 1 112245899999999999998853221 1234589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++........ .......+++.|+|||++.+ ..++.++|||||||++|+|
T Consensus 147 ~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~----~~~~~~~Di~slG~il~el 207 (272)
T cd05075 147 EN-------MNVCVADFGLSKKIYNGDYY--------RQGRIAKMPVKWIAIESLAD----RVYTTKSDVWSFGVTMWEI 207 (272)
T ss_pred CC-------CCEEECCCCcccccCcccce--------ecCCcccCCcccCCHHHccC----CCcChHHHHHHHHHHHHHH
Confidence 77 78999999999765432110 01112346778999999876 5678999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |+.||.+....+....+..+..+..+ ...+..+.+++.+||+.||++|||
T Consensus 208 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rps 260 (272)
T cd05075 208 ATRGQTPYPGVENSEIYDYLRQGNRLKQP---------------------------PDCLDGLYSLMSSCWLLNPKDRPS 260 (272)
T ss_pred HcCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcCCCcccCcC
Confidence 99 89999877666666665543322111 134556899999999999999999
Q ss_pred HHHHHHHHHh
Q 001143 1122 AGDLYEMFVA 1131 (1141)
Q Consensus 1122 a~ElL~~L~~ 1131 (1141)
+.++++++..
T Consensus 261 ~~~l~~~l~~ 270 (272)
T cd05075 261 FETLRCELEK 270 (272)
T ss_pred HHHHHHHHHh
Confidence 9999998753
No 119
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=1.3e-34 Score=319.70 Aligned_cols=254 Identities=23% Similarity=0.375 Sum_probs=200.1
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+.++|++.++||+|+||.||+|.+. +..+++|..... ....+. +.+|+.++++++||||+++++.+....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-----~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~ 74 (261)
T cd05072 4 PRESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-----TMSVQA----FLEEANLMKTLQHDKLVRLYAVVTKEE 74 (261)
T ss_pred chHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-----chhHHH----HHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 4678999999999999999999874 445677653321 112233 378999999999999999999887654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .++||||+++++|.++++.. ....+++..+..++.|++.||+|||+.+++||||||+||+++
T Consensus 75 ~--------------~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~ 137 (261)
T cd05072 75 P--------------IYIITEYMAKGSLLDFLKSD---EGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS 137 (261)
T ss_pred C--------------cEEEEecCCCCcHHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec
Confidence 3 39999999999999999752 234688999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+......... ......++..|+|||++.. ..++.++|||||||++|+|
T Consensus 138 ~~-------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 197 (261)
T cd05072 138 ES-------LMCKIADFGLARVIEDNEYT---------AREGAKFPIKWTAPEAINF----GSFTIKSDVWSFGILLYEI 197 (261)
T ss_pred CC-------CcEEECCCccceecCCCcee---------ccCCCccceecCCHHHhcc----CCCChhhhhhhhHHHHHHH
Confidence 87 78999999999765432111 1112235678999999875 4578899999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |..||......+....+......... ...+.++.+++.+||..+|++||+
T Consensus 198 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~ 250 (261)
T cd05072 198 VTYGKIPYPGMSNSDVMSALQRGYRMPRM---------------------------ENCPDELYDIMKTCWKEKAEERPT 250 (261)
T ss_pred HccCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHccCCcccCcC
Confidence 98 99999877666666555433221100 134567899999999999999999
Q ss_pred HHHHHHHHH
Q 001143 1122 AGDLYEMFV 1130 (1141)
Q Consensus 1122 a~ElL~~L~ 1130 (1141)
++++.+.+.
T Consensus 251 ~~~i~~~l~ 259 (261)
T cd05072 251 FDYLQSVLD 259 (261)
T ss_pred HHHHHHHHh
Confidence 999998764
No 120
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.6e-34 Score=319.77 Aligned_cols=253 Identities=23% Similarity=0.402 Sum_probs=200.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.++||+|+||.||+|.+. +..+++|+.. .. ......+ .+|++++++++||||+++++++....
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~--~~---~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (263)
T cd05052 5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--ED---TMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTREP 75 (263)
T ss_pred hHHeEEeeecCCcccceEEEEEEecCCceEEEEEec--CC---chHHHHH----HHHHHHHHhCCCCChhheEEEEcCCC
Confidence 456899999999999999999985 5566776643 21 1222333 78999999999999999999987655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .++||||+++++|.+++.. .....+++..++.++.|++.||.|||++|++||||||+||+++
T Consensus 76 ~--------------~~lv~e~~~~~~L~~~~~~---~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~ 138 (263)
T cd05052 76 P--------------FYIITEFMTYGNLLDYLRE---CNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG 138 (263)
T ss_pred C--------------cEEEEEeCCCCcHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc
Confidence 3 3999999999999999875 2234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||.+......... ......++..|+|||.+.+ ..++.++|||||||++|||
T Consensus 139 ~~-------~~~kl~df~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~el 198 (263)
T cd05052 139 EN-------HLVKVADFGLSRLMTGDTYT---------AHAGAKFPIKWTAPESLAY----NKFSIKSDVWAFGVLLWEI 198 (263)
T ss_pred CC-------CcEEeCCCccccccccceee---------ccCCCCCccccCCHHHhcc----CCCCchhHHHHHHHHHHHH
Confidence 77 78999999998765432111 1112234668999999876 5678899999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |..||.+....+....+.....+..+ ...+..+.+++.+||..||++||+
T Consensus 199 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~cl~~~p~~Rp~ 251 (263)
T cd05052 199 ATYGMSPYPGIDLSQVYELLEKGYRMERP---------------------------EGCPPKVYELMRACWQWNPSDRPS 251 (263)
T ss_pred HcCCCCCCCCCCHHHHHHHHHCCCCCCCC---------------------------CCCCHHHHHHHHHHccCCcccCCC
Confidence 98 99999877666665555433222111 145567999999999999999999
Q ss_pred HHHHHHHHH
Q 001143 1122 AGDLYEMFV 1130 (1141)
Q Consensus 1122 a~ElL~~L~ 1130 (1141)
+.++++.+.
T Consensus 252 ~~~l~~~l~ 260 (263)
T cd05052 252 FAEIHQAFE 260 (263)
T ss_pred HHHHHHHHH
Confidence 999999865
No 121
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.6e-35 Score=323.53 Aligned_cols=258 Identities=32% Similarity=0.443 Sum_probs=198.1
Q ss_pred ceEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|++.+.||+|+||+||+|++... .+|+|+..... ....... ...+|+.++++++||||+++++++.+..
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~--~~~~~~~----~~~~e~~~~~~l~~~~i~~~~~~~~~~~--- 71 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSE--IEEEERE----ENIREIKILRRLRHPNIVQILDVFQDDN--- 71 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTT--HHHHHHH----HHHHHHHHHHHHTBTTBCHEEEEEEESS---
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccc--ccccccc----hhhhhhhccccccccccccccccccccc---
Confidence 78999999999999999999655 48888765331 1111111 2246999999999999999999998755
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+||+++.+
T Consensus 72 -----------~~~~v~~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~- 134 (260)
T PF00069_consen 72 -----------YLYIVMEYCPGGSLQDYLQK-----NKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDEN- 134 (260)
T ss_dssp -----------EEEEEEEEETTEBHHHHHHH-----HSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTT-
T ss_pred -----------cccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccc-
Confidence 34899999998899999983 2468999999999999999999999999999999999999977
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.++|+|||.+....... .......++..|+|||++.. ...++.++||||+|+++|+|++|
T Consensus 135 ------~~~~l~Dfg~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l~~~ 195 (260)
T PF00069_consen 135 ------GEVKLIDFGSSVKLSENN----------ENFNPFVGTPEYMAPEVLQQ---GKKYTRKSDIWSLGIILYELLTG 195 (260)
T ss_dssp ------SEEEESSGTTTEESTSTT----------SEBSSSSSSGGGSCHHHHTT---TSSBSTHHHHHHHHHHHHHHHHS
T ss_pred ------cccccccccccccccccc----------cccccccccccccccccccc---ccccccccccccccccccccccc
Confidence 789999999987531111 11123468999999999871 25678999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
..||......+....+.............. .......+.+++.+||+.||++||++.++
T Consensus 196 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~l~~li~~~l~~~p~~R~~~~~l 254 (260)
T PF00069_consen 196 KLPFEESNSDDQLEIIEKILKRPLPSSSQQ---------------------SREKSEELRDLIKKMLSKDPEQRPSAEEL 254 (260)
T ss_dssp SSSSTTSSHHHHHHHHHHHHHTHHHHHTTS---------------------HTTSHHHHHHHHHHHSSSSGGGSTTHHHH
T ss_pred ccccccccchhhhhhhhhcccccccccccc---------------------cchhHHHHHHHHHHHccCChhHCcCHHHH
Confidence 999987633333333221111111100000 00224789999999999999999999999
Q ss_pred HHHHHh
Q 001143 1126 YEMFVA 1131 (1141)
Q Consensus 1126 L~~L~~ 1131 (1141)
++|+|+
T Consensus 255 ~~~~~~ 260 (260)
T PF00069_consen 255 LKHPWF 260 (260)
T ss_dssp HTSGGG
T ss_pred hcCCCC
Confidence 999996
No 122
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-36 Score=341.56 Aligned_cols=256 Identities=28% Similarity=0.453 Sum_probs=215.0
Q ss_pred ceEeeeecccCceEEEEEEECCccEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
|.-.+.||.|+||.||-|++..+..+|+|++....... .+.-.++ ++|+.+|.+++|||+|.+-|+|..+.
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDI----lKEVrFL~~l~HPntieYkgCyLre~---- 99 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI----LKEVRFLRQLRHPNTIEYKGCYLREH---- 99 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHH----HHHHHHHHhccCCCcccccceeeccc----
Confidence 56678999999999999999766666777665543322 2223333 89999999999999999999987654
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
..|||||||- ||-.+++.-. .+++.+.++..|..+.+.||.|||+.+.||||||+.|||+++.
T Consensus 100 ----------TaWLVMEYCl-GSAsDlleVh----kKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~-- 162 (948)
T KOG0577|consen 100 ----------TAWLVMEYCL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEP-- 162 (948)
T ss_pred ----------hHHHHHHHHh-ccHHHHHHHH----hccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCC--
Confidence 3499999996 7878887642 3579999999999999999999999999999999999999987
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1046 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk 1046 (1141)
|.|||+|||.|..... ...++|||+|||||++..+- .+.|+-++||||||++..||...+
T Consensus 163 -----g~VKLaDFGSAsi~~P--------------AnsFvGTPywMAPEVILAMD-EGqYdgkvDvWSLGITCIELAERk 222 (948)
T KOG0577|consen 163 -----GLVKLADFGSASIMAP--------------ANSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAERK 222 (948)
T ss_pred -----CeeeeccccchhhcCc--------------hhcccCCccccchhHheecc-ccccCCccceeeccchhhhhhhcC
Confidence 8999999999865432 34678999999999998754 568999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 001143 1047 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY 1126 (1141)
Q Consensus 1047 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL 1126 (1141)
+|+..++.+.....|.....|.+... +.+..++.|+..||+.-|.+|||.++++
T Consensus 223 PPlFnMNAMSALYHIAQNesPtLqs~--------------------------eWS~~F~~Fvd~CLqKipqeRptse~ll 276 (948)
T KOG0577|consen 223 PPLFNMNAMSALYHIAQNESPTLQSN--------------------------EWSDYFRNFVDSCLQKIPQERPTSEELL 276 (948)
T ss_pred CCccCchHHHHHHHHHhcCCCCCCCc--------------------------hhHHHHHHHHHHHHhhCcccCCcHHHHh
Confidence 99999998888888877776665421 5677899999999999999999999999
Q ss_pred HHHHhhcC
Q 001143 1127 EMFVARTS 1134 (1141)
Q Consensus 1127 ~~L~~~~~ 1134 (1141)
+|.|....
T Consensus 277 ~H~fv~R~ 284 (948)
T KOG0577|consen 277 KHRFVLRE 284 (948)
T ss_pred hcchhccC
Confidence 99988654
No 123
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.1e-34 Score=320.00 Aligned_cols=259 Identities=28% Similarity=0.437 Sum_probs=200.7
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|++|.||+|.. .+..+++|+...... ....... ...+.+|+.++++++||||+++++++....
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~--~~~~~~~-~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 77 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPD--SPETKKE-VNALECEIQLLKNLQHERIVQYYGCLRDDE- 77 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeeccc--chhhHHH-HHHHHHHHHHHHhCCCCCeeeeEEEEccCC-
Confidence 4689999999999999999986 456788887543321 1111111 123478999999999999999999988654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.||+||||+|+||+++.
T Consensus 78 -------------~~~~v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~ 139 (263)
T cd06625 78 -------------TLSIFMEYMPGGSVKDQLKA-----YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDS 139 (263)
T ss_pred -------------eEEEEEEECCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence 45999999999999999876 246889999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||.++........ ........++..|+|||++.+ ..++.++||||||+++|+|+
T Consensus 140 ~-------~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~el~ 201 (263)
T cd06625 140 A-------GNVKLGDFGASKRLQTICSS-------GTGMKSVTGTPYWMSPEVISG----EGYGRKADVWSVGCTVVEML 201 (263)
T ss_pred C-------CCEEEeecccceeccccccc-------cccccCCCcCccccCcceecc----CCCCchhhhHHHHHHHHHHH
Confidence 7 78999999998754332111 001123357889999999876 45789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+|+.||...........+... ..+.+ ....+..+.+++.+||..+|.+|||+
T Consensus 202 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~l~~~p~~Rpt~ 254 (263)
T cd06625 202 TEKPPWAEFEAMAAIFKIATQPTNPQL---------------------------PSHVSPDARNFLRRTFVENAKKRPSA 254 (263)
T ss_pred hCCCCccccchHHHHHHHhccCCCCCC---------------------------CccCCHHHHHHHHHHhhcCcccCCCH
Confidence 999999765544433332211 11111 11455678999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.++++|+|+
T Consensus 255 ~~ll~~~~~ 263 (263)
T cd06625 255 EELLRHFFV 263 (263)
T ss_pred HHHhhCCCC
Confidence 999999986
No 124
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.9e-34 Score=321.98 Aligned_cols=265 Identities=23% Similarity=0.386 Sum_probs=201.0
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~-----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
..++|.+.+.||+|++|.||+|.+.. ..+.++++....... ......+ .+|+.++++++||||+++++++
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~ 78 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS-EQDESDF----LMEALIMSKFNHQNIVRLIGVS 78 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC-HHHHHHH----HHHHHHHHhCCCCCEeeEEEEE
Confidence 34678999999999999999999865 445555554433221 2222233 7899999999999999999988
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~--~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
.+... .++||||+++++|.+++...... ....+++..+..++.||+.||+|||+++++||||||
T Consensus 79 ~~~~~--------------~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp 144 (277)
T cd05036 79 FERLP--------------RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAA 144 (277)
T ss_pred ccCCC--------------cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccch
Confidence 76543 38999999999999999764211 123589999999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
+||+++.++ ....+||+|||+++.+...... ........+..|+|||++.+ ..++.++||||||
T Consensus 145 ~nil~~~~~----~~~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~DiwslG 208 (277)
T cd05036 145 RNCLLTCKG----PGRVAKIADFGMARDIYRASYY--------RKGGRAMLPIKWMPPEAFLD----GIFTSKTDVWSFG 208 (277)
T ss_pred heEEEeccC----CCcceEeccCccccccCCccce--------ecCCCCCccHhhCCHHHHhc----CCcCchhHHHHHH
Confidence 999998652 1146999999999765321110 00111224567999999876 5688999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1037 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1037 viL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|++|+|++ |..||.+....+....+.....+..+ ...+..+.+++.+||+.+
T Consensus 209 ~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~cl~~~ 261 (277)
T cd05036 209 VLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRLDPP---------------------------KGCPGPVYRIMTDCWQHT 261 (277)
T ss_pred HHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHcCCC
Confidence 99999997 99999877766665555433222111 134567899999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 001143 1116 PTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~ 1130 (1141)
|++||++.+|++++.
T Consensus 262 p~~Rps~~~vl~~l~ 276 (277)
T cd05036 262 PEDRPNFATILERIQ 276 (277)
T ss_pred cccCcCHHHHHHHhh
Confidence 999999999999875
No 125
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.1e-35 Score=337.96 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=190.6
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
+.||+|+||.||+|++. +..+|+|+.+..... ...... .+..|+.++.++ +||||+++++++....
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~------ 69 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN-DDEDID----WVQTEKHVFEQASNHPFLVGLHSCFQTES------ 69 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc-chhHHH----HHHHHHHHHHhcCCCCcCCceeeEEEeCC------
Confidence 47999999999999984 456788875433211 112222 236888888777 7999999999988655
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..++||||+++++|..++.. ...+++..++.|+.||+.||.|||++||+||||||+||+++.+
T Consensus 70 --------~~~lv~E~~~~~~L~~~~~~-----~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~---- 132 (329)
T cd05618 70 --------RLFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSE---- 132 (329)
T ss_pred --------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC----
Confidence 34999999999999988865 3469999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kL~DfG~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el~~g~~P 195 (329)
T cd05618 133 ---GHIKLTDYGMCKEGLRPGD----------TTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGVLMFEMMAGRSP 195 (329)
T ss_pred ---CCEEEeeCCccccccCCCC----------ccccccCCccccCHHHHcC----CCCCCccceecccHHHHHHhhCCCC
Confidence 7899999999864321110 1123468999999999976 5678999999999999999999999
Q ss_pred CCCCCH--------H-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1049 YMGLSE--------L-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1049 f~~~~~--------~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|..... . .+...+... ...++ ...+..+.+++.+||+.||++|
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~i~~~-~~~~p---------------------------~~~~~~~~~ll~~~L~~dP~~R 247 (329)
T cd05618 196 FDIVGSSDNPDQNTEDYLFQVILEK-QIRIP---------------------------RSLSVKAASVLKSFLNKDPKER 247 (329)
T ss_pred CccCCCcCCcccccHHHHHHHHhcC-CCCCC---------------------------CCCCHHHHHHHHHHhcCCHHHc
Confidence 952110 1 111111111 11110 1345678999999999999999
Q ss_pred CC------HHHHHHHHHhhc
Q 001143 1120 PT------AGDLYEMFVART 1133 (1141)
Q Consensus 1120 PS------a~ElL~~L~~~~ 1133 (1141)
|+ +.++++|+|+..
T Consensus 248 ~~~~~~~~~~~i~~hp~f~~ 267 (329)
T cd05618 248 LGCHPQTGFADIQGHPFFRN 267 (329)
T ss_pred CCCCCCCCHHHHhcCCCCCC
Confidence 98 589999999864
No 126
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-37 Score=326.94 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=213.1
Q ss_pred ceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
|.++++||+|+||.||+|.++....+++|+++.+. .+.+++ .+|+.+|.++..|++|++||.|....
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEI----IKEISIMQQC~S~yVVKYYGSYFK~s----- 101 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEI----IKEISIMQQCKSKYVVKYYGSYFKHS----- 101 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHH----HHHHHHHHHcCCchhhhhhhhhccCC-----
Confidence 78999999999999999998776666777666542 334444 79999999999999999999877544
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 967 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~ 967 (1141)
.+|||||||-.||..+.++. ..+++++.++..+++..++||+|||...-||||||+.|||++.+
T Consensus 102 ---------DLWIVMEYCGAGSiSDI~R~----R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~--- 165 (502)
T KOG0574|consen 102 ---------DLWIVMEYCGAGSISDIMRA----RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTD--- 165 (502)
T ss_pred ---------ceEeehhhcCCCcHHHHHHH----hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEccc---
Confidence 34999999999999999986 35689999999999999999999999999999999999999988
Q ss_pred CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001143 968 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1047 (1141)
Q Consensus 968 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~ 1047 (1141)
|..||+|||.|..+.... ....+..|||.|||||++.. -.|+.++||||||++..||..|++
T Consensus 166 ----G~AKLADFGVAGQLTDTM----------AKRNTVIGTPFWMAPEVI~E----IGY~~~ADIWSLGITaIEMAEG~P 227 (502)
T KOG0574|consen 166 ----GIAKLADFGVAGQLTDTM----------AKRNTVIGTPFWMAPEVIEE----IGYDTKADIWSLGITAIEMAEGRP 227 (502)
T ss_pred ----chhhhhhccccchhhhhH----------HhhCccccCcccccHHHHHH----hccchhhhHhhhcchhhhhhcCCC
Confidence 899999999997765422 13346789999999999987 568899999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 001143 1048 PYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYE 1127 (1141)
Q Consensus 1048 Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~ 1127 (1141)
||....++..+-.|-...+|.+ ..| ...+.++.+++++||...|++|-||.++++
T Consensus 228 PYsDIHPMRAIFMIPT~PPPTF----------------------~KP---E~WS~~F~DFi~~CLiK~PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 228 PYSDIHPMRAIFMIPTKPPPTF----------------------KKP---EEWSSEFNDFIRSCLIKKPEERKTALRLCE 282 (502)
T ss_pred CcccccccceeEeccCCCCCCC----------------------CCh---HhhhhHHHHHHHHHhcCCHHHHHHHHHHhh
Confidence 9987766544444332222221 122 256778999999999999999999999999
Q ss_pred HHHhhcCCC
Q 001143 1128 MFVARTSSS 1136 (1141)
Q Consensus 1128 ~L~~~~~s~ 1136 (1141)
|+|.+....
T Consensus 283 H~FiknA~g 291 (502)
T KOG0574|consen 283 HTFIKNAPG 291 (502)
T ss_pred hhhhcCCCc
Confidence 999876543
No 127
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=1e-34 Score=349.44 Aligned_cols=283 Identities=19% Similarity=0.213 Sum_probs=196.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC------CCCccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR------HSCIVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~------HpNIVkllg 876 (1141)
-.+|++.++||+|+||+||+|.+. +..||+|+.+... ..... +..|+.++..++ |++|+++++
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-----~~~~~----~~~e~~~l~~l~~~~~~~~~~i~~i~~ 198 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-----KYTRD----AKIEIQFMEKVRQADPADRFPLMKIQR 198 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-----hhHHH----HHHHHHHHHHHhhcCcccCcceeeeEE
Confidence 467999999999999999999874 5567888753211 11111 245666666664 456888888
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIK 955 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLK 955 (1141)
++.... .+.++|||++ |++|.+++.+ ...+++..+..|+.||+.||+|||+ .||||||||
T Consensus 199 ~~~~~~-------------~~~~iv~~~~-g~~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlK 259 (467)
T PTZ00284 199 YFQNET-------------GHMCIVMPKY-GPCLLDWIMK-----HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLK 259 (467)
T ss_pred EEEcCC-------------ceEEEEEecc-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCC
Confidence 876432 2469999998 6899998875 2469999999999999999999998 599999999
Q ss_pred CCCeeeeccccc---------CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC
Q 001143 956 SENILIDLERKK---------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1026 (1141)
Q Consensus 956 P~NILld~~~~~---------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1026 (1141)
|+|||++.++.. ....+.+||+|||.+..... .....+||+.|+|||++.+ ..+
T Consensus 260 P~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~-------------~~~~~~gt~~Y~APE~~~~----~~~ 322 (467)
T PTZ00284 260 PENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH-------------SRTAIVSTRHYRSPEVVLG----LGW 322 (467)
T ss_pred HHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc-------------ccccccCCccccCcHHhhc----CCC
Confidence 999999765210 00123699999998753211 1124579999999999986 568
Q ss_pred CchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCc-cccccccCC---CC-----------
Q 001143 1027 GLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH-EHEVAQSGS---GF----------- 1091 (1141)
Q Consensus 1027 s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~-~~~~~~~~~---~~----------- 1091 (1141)
+.++|||||||++|||++|+.||.+.+..+....+....... +..+....... ...+..... ..
T Consensus 323 ~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (467)
T PTZ00284 323 MYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRL-PSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIAR 401 (467)
T ss_pred CcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCC-CHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhc
Confidence 899999999999999999999998877666555553321111 11111000000 000000000 00
Q ss_pred CCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1092 EKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1092 ~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
..+.........+.+||.+||++||++|||++|+++|+|+..
T Consensus 402 ~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~ 443 (467)
T PTZ00284 402 ARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLK 443 (467)
T ss_pred ccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccc
Confidence 000011123466889999999999999999999999999975
No 128
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-34 Score=361.74 Aligned_cols=272 Identities=20% Similarity=0.329 Sum_probs=204.9
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+.+|++.++||+|+||+||+|.+.. ..+++|+.... ......... +..|+.++++++|||||+++++|.
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~--~l~e~~~~~----~~~EI~IL~~L~HPNIVrl~d~f~ 82 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYR--GLKEREKSQ----LVIEVNVMRELKHKNIVRYIDRFL 82 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecc--ccCHHHHHH----HHHHHHHHHHcCCCCcCeEEEEEE
Confidence 4456789999999999999999999854 45666664432 222333333 478999999999999999999986
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-------Ccccc
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-------HIMHR 952 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-------gIvHr 952 (1141)
+... ..+||||||+++++|.++|...... ...+++..++.|+.||+.||.|||+. +||||
T Consensus 83 de~~------------~~lyIVMEY~~gGSL~~lL~k~~~~-~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHR 149 (1021)
T PTZ00266 83 NKAN------------QKLYILMEFCDAGDLSRNIQKCYKM-FGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHR 149 (1021)
T ss_pred ecCC------------CEEEEEEeCCCCCcHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceec
Confidence 5321 2469999999999999999764332 24699999999999999999999984 59999
Q ss_pred CCCCCCeeeecccc----------cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001143 953 DIKSENILIDLERK----------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1022 (1141)
Q Consensus 953 DLKP~NILld~~~~----------~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1022 (1141)
||||+||||+.... ...+...+||+|||++..+.... ......||+.|+|||++.+.
T Consensus 150 DLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s-----------~~~s~vGTp~YmAPEvL~ge-- 216 (1021)
T PTZ00266 150 DLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES-----------MAHSCVGTPYYWSPELLLHE-- 216 (1021)
T ss_pred cCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc-----------cccccCCCccccCHHHHhcc--
Confidence 99999999975311 01223569999999997543211 11245699999999998652
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhH
Q 001143 1023 PNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1101 (1141)
Q Consensus 1023 ~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1141)
...++.++|||||||+||+|++|+.||....... +...+.......+ ...+
T Consensus 217 ~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lpi----------------------------~~~S 268 (1021)
T PTZ00266 217 TKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLPI----------------------------KGKS 268 (1021)
T ss_pred CCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCCc----------------------------CCCC
Confidence 2457899999999999999999999997644332 3333222211000 0345
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1102 SFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1102 ~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.++.+||..||..+|.+||++.|++.|+|+..
T Consensus 269 ~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~ 300 (1021)
T PTZ00266 269 KELNILIKNLLNLSAKERPSALQCLGYQIIKN 300 (1021)
T ss_pred HHHHHHHHHHhcCChhHCcCHHHHhccHHHhh
Confidence 67999999999999999999999999999863
No 129
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.8e-34 Score=322.78 Aligned_cols=261 Identities=22% Similarity=0.357 Sum_probs=200.2
Q ss_pred CCCCceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
++.+|++.++||+|+||.||+|.+ .+..+++|. +.... ....... +.+|+.++++++||||++++++
T Consensus 3 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~--~~~~~-~~~~~~~----~~~E~~~l~~l~h~niv~~~~~ 75 (283)
T cd05090 3 PLSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKT--LKDIN-NPQQWGE----FQQEASLMAELHHPNIVCLLGV 75 (283)
T ss_pred ChhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEe--ccCCC-CHHHHHH----HHHHHHHHhhCCCCCeeeEEEE
Confidence 467899999999999999999985 223455554 33221 2222233 3789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh------------cCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE------------TGEKHVSVKLALFIAQDVAAALVELH 945 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~------------~~~~~Ls~~~i~~Ia~QIa~gL~yLH 945 (1141)
+..... .|+||||+++++|.+++..... .....+++..+..++.||+.||.|||
T Consensus 76 ~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH 141 (283)
T cd05090 76 VTQEQP--------------VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS 141 (283)
T ss_pred EecCCc--------------eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 876543 3999999999999999864211 01235789999999999999999999
Q ss_pred HCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001143 946 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1025 (1141)
Q Consensus 946 s~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1025 (1141)
++||+||||||+|||++.+ +.+||+|||+++........ .......++..|+|||++.+ ..
T Consensus 142 ~~~i~H~dlkp~nili~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~ 202 (283)
T cd05090 142 SHFFVHKDLAARNILIGEQ-------LHVKISDLGLSREIYSADYY--------RVQPKSLLPIRWMPPEAIMY----GK 202 (283)
T ss_pred hcCeehhccccceEEEcCC-------CcEEeccccccccccCCcce--------ecccCCCccceecChHHhcc----CC
Confidence 9999999999999999887 78999999999765332111 01122345778999999875 45
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHH
Q 001143 1026 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1104 (1141)
Q Consensus 1026 ~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1104 (1141)
++.++|||||||++|||++ |..||.+.....+...+.....+..+ ...+..+
T Consensus 203 ~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~ 255 (283)
T cd05090 203 FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVRKRQLLPCS---------------------------EDCPPRM 255 (283)
T ss_pred CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHH
Confidence 7899999999999999999 99999877666666655443322111 1345678
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1105 VDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1105 ~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
.+++.+||+.||.+||++.+|++++..
T Consensus 256 ~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 256 YSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 999999999999999999999998753
No 130
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-36 Score=343.44 Aligned_cols=258 Identities=27% Similarity=0.455 Sum_probs=206.7
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
-+||+|+||+||.|++..+.|.++|+.+..... ...+ -+..|+.+.++|+|.|||+++|.+.+++++
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds--r~~Q----PLhEEIaLH~~LrHkNIVrYLGs~senGf~------- 647 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS--REVQ----PLHEEIALHSTLRHKNIVRYLGSVSENGFF------- 647 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccc--hhhc----cHHHHHHHHHHHhhHhHHHHhhccCCCCeE-------
Confidence 479999999999999999999999887764322 2222 237899999999999999999998776644
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 971 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~ 971 (1141)
-|.||-++||||.++++. ..+...-.+..+-.+.+||+.||.|||.+.|||||||-+|+||+.-.
T Consensus 648 -------kIFMEqVPGGSLSsLLrs--kWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTyS------ 712 (1226)
T KOG4279|consen 648 -------KIFMEQVPGGSLSSLLRS--KWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYS------ 712 (1226)
T ss_pred -------EEEeecCCCCcHHHHHHh--ccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeecc------
Confidence 899999999999999986 23333338899999999999999999999999999999999997542
Q ss_pred CeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001143 972 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1051 (1141)
Q Consensus 972 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~ 1051 (1141)
|.+||+|||.++.+.... +-..++.||..|||||++.... ..|+.++|||||||++.||.||++||..
T Consensus 713 GvlKISDFGTsKRLAgin----------P~TETFTGTLQYMAPEvIDqG~--RGYG~aADIWS~GCT~vEMATGrPPF~E 780 (1226)
T KOG4279|consen 713 GVLKISDFGTSKRLAGIN----------PCTETFTGTLQYMAPEVIDQGP--RGYGKAADIWSFGCTMVEMATGRPPFVE 780 (1226)
T ss_pred ceEEecccccchhhccCC----------ccccccccchhhhChHhhccCC--cCCCchhhhhhccceeEeeccCCCCeee
Confidence 899999999998764321 2234678999999999998643 5789999999999999999999999975
Q ss_pred CCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1052 LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1052 ~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
....+. .+.+.|... ..|..+.+.+.+.+.+|.+|+.+||.+||+|.+++..+|.
T Consensus 781 lgspqA-AMFkVGmyK------------------------vHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFl 835 (1226)
T KOG4279|consen 781 LGSPQA-AMFKVGMYK------------------------VHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFL 835 (1226)
T ss_pred cCChhH-hhhhhccee------------------------cCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCccc
Confidence 433321 111222110 0122233677889999999999999999999999999998
Q ss_pred hcC
Q 001143 1132 RTS 1134 (1141)
Q Consensus 1132 ~~~ 1134 (1141)
...
T Consensus 836 q~~ 838 (1226)
T KOG4279|consen 836 QHN 838 (1226)
T ss_pred ccC
Confidence 755
No 131
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=6.7e-35 Score=341.25 Aligned_cols=261 Identities=23% Similarity=0.348 Sum_probs=196.8
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 875 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkll 875 (1141)
..++|++.++||+|+||.||+|++.. ..||+|+.+.. . .....+ .+.+|+.+++++ +|||||+++
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~--~-~~~~~~----~~~~E~~il~~l~~h~nIv~~~ 108 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKAS--A-HTDERE----ALMSELKILSHLGQHKNIVNLL 108 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCC--C-CHHHHH----HHHHHHHHHHhhccCCceeeEe
Confidence 35579999999999999999998622 24777764322 1 222223 347899999999 799999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh------------------------------------
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE------------------------------------ 919 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~------------------------------------ 919 (1141)
+++..... .++||||+++|+|.++++....
T Consensus 109 ~~~~~~~~--------------~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (374)
T cd05106 109 GACTHGGP--------------VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFS 174 (374)
T ss_pred eEecCCCC--------------eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhccccccccccc
Confidence 99876553 4999999999999999865321
Q ss_pred -----------------------------cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCC
Q 001143 920 -----------------------------TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADG 970 (1141)
Q Consensus 920 -----------------------------~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~ 970 (1141)
....++++..+.+|+.||+.||.|||++||+||||||+|||++.+
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~------ 248 (374)
T cd05106 175 SQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDG------ 248 (374)
T ss_pred ccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCC------
Confidence 012357889999999999999999999999999999999999877
Q ss_pred CCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 001143 971 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPY 1049 (1141)
Q Consensus 971 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf 1049 (1141)
+.+||+|||+++.+...... .......++..|+|||++.+ ..++.++|||||||++|+|++ |+.||
T Consensus 249 -~~~kL~DfGla~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwSlGvil~ellt~G~~Pf 315 (374)
T cd05106 249 -RVAKICDFGLARDIMNDSNY--------VVKGNARLPVKWMAPESIFD----CVYTVQSDVWSYGILLWEIFSLGKSPY 315 (374)
T ss_pred -CeEEEeeceeeeeccCCcce--------eeccCCCCccceeCHHHhcC----CCCCccccHHHHHHHHHHHHhCCCCCC
Confidence 78999999998764332110 01112235678999999875 568899999999999999997 99999
Q ss_pred CCCCHHHHH-HHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 001143 1050 MGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEM 1128 (1141)
Q Consensus 1050 ~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~ 1128 (1141)
......... ..+..+..+..+ ...+.++.+++.+||+.||.+|||+.++++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 316 PGILVNSKFYKMVKRGYQMSRP---------------------------DFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred ccccccHHHHHHHHcccCccCC---------------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 765433222 222221111100 0235679999999999999999999999998
Q ss_pred HHh
Q 001143 1129 FVA 1131 (1141)
Q Consensus 1129 L~~ 1131 (1141)
+..
T Consensus 369 l~~ 371 (374)
T cd05106 369 IQR 371 (374)
T ss_pred HHH
Confidence 765
No 132
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=2.4e-34 Score=317.30 Aligned_cols=247 Identities=22% Similarity=0.337 Sum_probs=193.9
Q ss_pred eecccCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCC
Q 001143 813 EAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 813 ~LG~GsfG~Vy~a~~----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
.||+|+||.||+|.+ .+..+++|+.+.. .......+. +.+|+.+++.++||||+++++++..+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~------- 68 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKND--NNDPALKDE----LLREANVMQQLDNPYIVRMIGICEAE------- 68 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCC--CCcHHHHHH----HHHHHHHHHhCCCCCcceEEEEEcCC-------
Confidence 689999999999976 3456777764322 222222333 47899999999999999999987532
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+||+++.+
T Consensus 69 --------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~---- 131 (257)
T cd05116 69 --------SWMLVMELAELGPLNKFLQK-----NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQ---- 131 (257)
T ss_pred --------CcEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCC----
Confidence 23899999999999999875 2468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQV 1047 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~ 1047 (1141)
+.+||+|||.+..+....... .......++..|+|||.+.. ..++.++|||||||++|||++ |+.
T Consensus 132 ---~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~el~t~g~~ 197 (257)
T cd05116 132 ---HYAKISDFGLSKALGADENYY-------KAKTHGKWPVKWYAPECMNY----YKFSSKSDVWSFGVLMWEAFSYGQK 197 (257)
T ss_pred ---CeEEECCCccccccCCCCCee-------eecCCCCCCccccCHhHhcc----CCcCchhHHHHHHHHHHHHHhCCCC
Confidence 789999999997654322110 00112234678999999865 457789999999999999998 999
Q ss_pred CCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 001143 1048 PYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYE 1127 (1141)
Q Consensus 1048 Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~ 1127 (1141)
||......++.+.+..+..+..+. ..+.++.++|.+||+.||++||++++|.+
T Consensus 198 p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~~~~~p~~Rp~~~~i~~ 250 (257)
T cd05116 198 PYKGMKGNEVTQMIESGERMECPQ---------------------------RCPPEMYDLMKLCWTYGVDERPGFAVVEL 250 (257)
T ss_pred CCCCCCHHHHHHHHHCCCCCCCCC---------------------------CCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence 998877777777766544332211 34567999999999999999999999998
Q ss_pred HHH
Q 001143 1128 MFV 1130 (1141)
Q Consensus 1128 ~L~ 1130 (1141)
.|.
T Consensus 251 ~l~ 253 (257)
T cd05116 251 RLR 253 (257)
T ss_pred HHh
Confidence 874
No 133
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.5e-35 Score=323.36 Aligned_cols=251 Identities=29% Similarity=0.489 Sum_probs=194.2
Q ss_pred eEeeeecccCceEEEEEEEC------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFG------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
++.+.||.|+||.||+|.+. +..|+||+.+ . .......+.+ .+|+..+++++||||++++|++....
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~--~-~~~~~~~~~~----~~e~~~l~~l~h~ni~~~~g~~~~~~ 74 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILK--P-SSSEEEEEEF----LNEIQILRKLRHPNIVKLYGFCIENE 74 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEES--T-TSSHHHHHHH----HHHHHHHHTHSBTTBE-EEEEEESSS
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEec--c-ccccccceee----eecccccccccccccccccccccccc
Confidence 57789999999999999997 4566777652 2 2223334444 89999999999999999999998544
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .++||||+++|+|.+++... ....+++..+..|+.||+.||.|||+++|+||||+++||+++
T Consensus 75 ~--------------~~lv~e~~~~g~L~~~L~~~---~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~ 137 (259)
T PF07714_consen 75 P--------------LFLVMEYCPGGSLDDYLKSK---NKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD 137 (259)
T ss_dssp S--------------EEEEEE--TTEBHHHHHHHT---CTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE
T ss_pred c--------------cccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccccccc
Confidence 2 49999999999999999872 235799999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++.......... ......+...|+|||.+.+ ..++.++||||||+++|||
T Consensus 138 ~~-------~~~Kl~~f~~~~~~~~~~~~~--------~~~~~~~~~~~~aPE~~~~----~~~~~ksDVysfG~~l~ei 198 (259)
T PF07714_consen 138 SN-------GQVKLSDFGLSRPISEKSKYK--------NDSSQQLPLRYLAPEVLKD----GEYTKKSDVYSFGMLLYEI 198 (259)
T ss_dssp TT-------TEEEEESTTTGEETTTSSSEE--------ESTTSESGGGGS-HHHHHH----SEESHHHHHHHHHHHHHHH
T ss_pred cc-------ccccccccccccccccccccc--------ccccccccccccccccccc----ccccccccccccccccccc
Confidence 87 899999999997652211110 1112346778999999987 4478999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |+.||......++...+..+..+..+. .++..+.+++..||..||.+|||
T Consensus 199 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~C~~~~p~~RPs 251 (259)
T PF07714_consen 199 LTLGKFPFSDYDNEEIIEKLKQGQRLPIPD---------------------------NCPKDIYSLIQQCWSHDPEKRPS 251 (259)
T ss_dssp HTTSSGTTTTSCHHHHHHHHHTTEETTSBT---------------------------TSBHHHHHHHHHHT-SSGGGS--
T ss_pred cccccccccccccccccccccccccceecc---------------------------chhHHHHHHHHHHcCCChhhCcC
Confidence 99 789998888877777775554432221 45567999999999999999999
Q ss_pred HHHHHHHH
Q 001143 1122 AGDLYEMF 1129 (1141)
Q Consensus 1122 a~ElL~~L 1129 (1141)
+.++++.|
T Consensus 252 ~~~i~~~L 259 (259)
T PF07714_consen 252 FQEILQEL 259 (259)
T ss_dssp HHHHHHHH
T ss_pred HHHHHhcC
Confidence 99999865
No 134
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.3e-34 Score=322.55 Aligned_cols=259 Identities=24% Similarity=0.377 Sum_probs=202.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
..+|.+.+.||+|+||.||+|.+. ...+++|+.... . ..+..+. +.+|++++++++||||++++++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~--~-~~~~~~~----~~~e~~~l~~l~~~~i~~~~~~ 76 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKET--A-SNDARKD----FEREAELLTNFQHENIVKFYGV 76 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeeccc--C-CHHHHHH----HHHHHHHHHhcCCCCchheeeE
Confidence 456899999999999999999863 245777764321 1 1222233 4899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhh---------hcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLS---------ETGEKHVSVKLALFIAQDVAAALVELHSKH 948 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~---------~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g 948 (1141)
+.... ..++||||+++++|.++++... ......+++..+..++.||+.||.|||++|
T Consensus 77 ~~~~~--------------~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~ 142 (280)
T cd05049 77 CTEGD--------------PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH 142 (280)
T ss_pred EecCC--------------CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC
Confidence 87654 3499999999999999997632 112345889999999999999999999999
Q ss_pred ccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001143 949 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1028 (1141)
Q Consensus 949 IvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1028 (1141)
++||||||+||+++.+ +.++|+|||.+......... .......+++.|+|||++.+ ..++.
T Consensus 143 i~h~dlkp~nili~~~-------~~~kl~d~g~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~ 203 (280)
T cd05049 143 FVHRDLATRNCLVGYD-------LVVKIGDFGMSRDVYTTDYY--------RVGGHTMLPIRWMPPESIMY----RKFTT 203 (280)
T ss_pred eeccccccceEEEcCC-------CeEEECCcccceecccCcce--------ecCCCCcccceecChhhhcc----CCcch
Confidence 9999999999999887 88999999998754321110 01123346788999999876 56889
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHH
Q 001143 1029 EVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1107 (1141)
Q Consensus 1029 ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1107 (1141)
++|||||||++|+|++ |..||......+....+..+..+..+ ...+..+.++
T Consensus 204 ~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l 256 (280)
T cd05049 204 ESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRLLQRP---------------------------RTCPSEVYDI 256 (280)
T ss_pred hhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHH
Confidence 9999999999999998 99999877776666665543322211 1345679999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHH
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~ 1130 (1141)
+.+||+.||++||++.|+++.+.
T Consensus 257 i~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 257 MLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred HHHHcCCCcccCCCHHHHHHHhh
Confidence 99999999999999999998763
No 135
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1e-34 Score=324.26 Aligned_cols=280 Identities=21% Similarity=0.264 Sum_probs=199.5
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|++|.||+|++. +..+++|+..... ......+ .+.+|+.++++++||||+++++++.++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 72 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLES--EEEGVPS----TAIREISLLKELQHPNIVCLQDVLMQES-- 72 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccc--ccCCchH----HHHHHHHHHHhcCCCCEeeeEEEEeeCC--
Confidence 5899999999999999999984 5667777654332 1111112 2368999999999999999999988654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||++ ++|.+++.... ....+++..++.++.||+.||+|||++||+||||||+||+++.+
T Consensus 73 ------------~~~~v~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~ 137 (285)
T cd07861 73 ------------RLYLIFEFLS-MDLKKYLDSLP--KGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNK 137 (285)
T ss_pred ------------eEEEEEecCC-CCHHHHHhcCC--CCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCC
Confidence 3499999997 68998886522 22468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||++........ ......+++.|+|||++.+ ...++.++|||||||++|+|++
T Consensus 138 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~il~~l~t 197 (285)
T cd07861 138 -------GVIKLADFGLARAFGIPVR----------VYTHEVVTLWYRAPEVLLG---SPRYSTPVDIWSIGTIFAEMAT 197 (285)
T ss_pred -------CcEEECcccceeecCCCcc----------cccCCcccccccChHHhcC---CCCcCcHHHHHHHHHHHHHHHH
Confidence 7899999999865432111 1112357889999999865 2346789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccC--ccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1045 LQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSC--HEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|+.||.+....+....+ .....+. ...+...... ....... .............++++.++|.+||+.||.+|||
T Consensus 198 g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt 275 (285)
T cd07861 198 KKPLFHGDSEIDQLFRIFRILGTPT-EDVWPGVTSLPDYKNTFPK-WKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRIS 275 (285)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCC-hhhhhcchhhHHHHhhccc-cCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCC
Confidence 99999876654433222 2111111 1110000000 0000000 0000000011145678899999999999999999
Q ss_pred HHHHHHHHHh
Q 001143 1122 AGDLYEMFVA 1131 (1141)
Q Consensus 1122 a~ElL~~L~~ 1131 (1141)
+.+|++|+|+
T Consensus 276 ~~~ll~~~~~ 285 (285)
T cd07861 276 AKKALNHPYF 285 (285)
T ss_pred HHHHhcCCCC
Confidence 9999999886
No 136
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.5e-35 Score=340.00 Aligned_cols=249 Identities=25% Similarity=0.292 Sum_probs=193.2
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEecCCCCCCCC
Q 001143 814 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 814 LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
||+|+||+||+|++. +..+|+|+........ ..... ....|..++... +||||+++++.+.....
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~-~~~~~----~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~----- 70 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVA-KKEVA----HTIGERNILVRTLLDESPFIVGLKFSFQTDSD----- 70 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhh-hhHHH----HHHHHHHHHHHhccCCCCcCcceEEEEecCCe-----
Confidence 799999999999984 5678888754221111 11111 224677777655 69999999999886553
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
.|+||||+++++|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 71 ---------~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~---- 132 (330)
T cd05586 71 ---------LYLVTDYMSGGELFWHLQK-----EGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDAT---- 132 (330)
T ss_pred ---------EEEEEcCCCCChHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCC----
Confidence 4999999999999998875 3468999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||++....... .......||+.|+|||++.+ ...++.++|||||||++|+|++|+.|
T Consensus 133 ---~~~kl~Dfg~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DvwslGvil~elltG~~P 196 (330)
T cd05586 133 ---GHIALCDFGLSKANLTDN----------KTTNTFCGTTEYLAPEVLLD---EKGYTKHVDFWSLGVLVFEMCCGWSP 196 (330)
T ss_pred ---CCEEEecCCcCcCCCCCC----------CCccCccCCccccCHHHHcC---CCCCCCccceeccccEEEEeccCCCC
Confidence 789999999986432211 11123469999999999875 23478999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC----CHHH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP----TAGD 1124 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP----Sa~E 1124 (1141)
|.+....+....+..+... ++. ...++.+.+++.+||+.||.+|| ++.+
T Consensus 197 f~~~~~~~~~~~i~~~~~~-~~~--------------------------~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 249 (330)
T cd05586 197 FYAEDTQQMYRNIAFGKVR-FPK--------------------------NVLSDEGRQFVKGLLNRNPQHRLGAHRDAVE 249 (330)
T ss_pred CCCCCHHHHHHHHHcCCCC-CCC--------------------------ccCCHHHHHHHHHHcCCCHHHCCCCCCCHHH
Confidence 9887776666665433221 100 02455689999999999999998 7999
Q ss_pred HHHHHHhhc
Q 001143 1125 LYEMFVART 1133 (1141)
Q Consensus 1125 lL~~L~~~~ 1133 (1141)
+++|+|+..
T Consensus 250 ll~h~~~~~ 258 (330)
T cd05586 250 LKEHPFFAD 258 (330)
T ss_pred HhcCccccC
Confidence 999999864
No 137
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=331.65 Aligned_cols=255 Identities=22% Similarity=0.272 Sum_probs=212.6
Q ss_pred CceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
-|.+.+.||+|.|.+|-+|++ .+..||||| ++++.........+ .+|++.|+-++|||||++|++.....
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKv--iDKTKlD~~st~hl----fqEVRCMKLVQHpNiVRLYEViDTQT-- 90 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKV--IDKTKLDTLSTGHL----FQEVRCMKLVQHPNIVRLYEVIDTQT-- 90 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEE--ecccccchhhhhHH----HHHHHHHHHhcCcCeeeeeehhcccc--
Confidence 388999999999999999986 788899998 44444433333333 68999999999999999999887544
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.+|||+|+-++|+|++||-+. ...+.+..+++++.||+.|+.|+|+..+|||||||+||.+-+.
T Consensus 91 ------------KlyLiLELGD~GDl~DyImKH----e~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEK 154 (864)
T KOG4717|consen 91 ------------KLYLILELGDGGDLFDYIMKH----EEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEK 154 (864)
T ss_pred ------------eEEEEEEecCCchHHHHHHhh----hccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeee
Confidence 459999999999999999762 3469999999999999999999999999999999999977655
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
- |-|||.|||++..+.... .....+|+..|-|||++.+. .+..+++||||||||||.|..
T Consensus 155 l------GlVKLTDFGFSNkf~PG~-----------kL~TsCGSLAYSAPEILLGD---sYDAPAVDiWSLGVILyMLVC 214 (864)
T KOG4717|consen 155 L------GLVKLTDFGFSNKFQPGK-----------KLTTSCGSLAYSAPEILLGD---SYDAPAVDIWSLGVILYMLVC 214 (864)
T ss_pred c------CceEeeeccccccCCCcc-----------hhhcccchhhccCchhhhcC---ccCCcchhhhHHHHHHHHHHh
Confidence 2 889999999986554322 22356799999999999983 344689999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|++||+..+..+...+|....+.- + ...+.+.++||..||..||.+|.+.+|
T Consensus 215 Gq~PFqeANDSETLTmImDCKYtv-P---------------------------shvS~eCrdLI~sMLvRdPkkRAslEe 266 (864)
T KOG4717|consen 215 GQPPFQEANDSETLTMIMDCKYTV-P---------------------------SHVSKECRDLIQSMLVRDPKKRASLEE 266 (864)
T ss_pred CCCccccccchhhhhhhhcccccC-c---------------------------hhhhHHHHHHHHHHHhcCchhhccHHH
Confidence 999999888888877776554321 1 166788999999999999999999999
Q ss_pred HHHHHHhhc
Q 001143 1125 LYEMFVART 1133 (1141)
Q Consensus 1125 lL~~L~~~~ 1133 (1141)
|..+.|.+.
T Consensus 267 I~s~~Wlq~ 275 (864)
T KOG4717|consen 267 IVSTSWLQA 275 (864)
T ss_pred HhccccccC
Confidence 999999874
No 138
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.5e-34 Score=329.12 Aligned_cols=284 Identities=20% Similarity=0.260 Sum_probs=189.7
Q ss_pred eeeecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 811 CDEAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 811 ~~~LG~GsfG~Vy~a~~~----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
.++||+|+||+||+|++. +..+|+|.. +..... .. +.+|+.++++++||||+++++++.....
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~--~~~~~~----~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 72 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQI--EGTGIS----MS----ACREIALLRELKHPNVISLQKVFLSHAD--- 72 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEE--CCCCCc----HH----HHHHHHHHHhcCCCCCcceeeeEecCCC---
Confidence 468999999999999863 244666654 322111 11 2689999999999999999998864321
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhh----cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE----TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~----~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
...++||||+. ++|.+++..... .....+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 73 ---------~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~ 142 (317)
T cd07868 73 ---------RKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 142 (317)
T ss_pred ---------cEEEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEe
Confidence 24699999996 689888764221 1123589999999999999999999999999999999999995
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+. ...+.+||+|||+|......... ........||+.|+|||++.+ ...++.++||||+||++|+|
T Consensus 143 ~~~---~~~~~~kl~DfG~a~~~~~~~~~-------~~~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el 209 (317)
T cd07868 143 GEG---PERGRVKIADMGFARLFNSPLKP-------LADLDPVVVTFWYRAPELLLG---ARHYTKAIDIWAIGCIFAEL 209 (317)
T ss_pred cCC---CCcCcEEEeecCceeccCCCCcc-------ccccCCccccccccCCHHHcC---CCCcCchhhHHHHHHHHHHH
Confidence 431 12268999999999765432111 011224568999999999876 23578999999999999999
Q ss_pred HhCCCCCCCCCH---------HHHHHHH-HhCCCCCchhHHhhhccCccc-----ccccc-CCCCC----CchhhhhhHH
Q 001143 1043 LTLQVPYMGLSE---------LEIHDLI-QMGKRPRLTDELEALGSCHEH-----EVAQS-GSGFE----KPEAELETLS 1102 (1141)
Q Consensus 1043 LTGk~Pf~~~~~---------~el~~~I-~~~~~p~l~~~l~~~~~~~~~-----~~~~~-~~~~~----~~~~~~~~~~ 1102 (1141)
++|++||..... .+....+ .....+.. ..+......... ..... ..... ........+.
T Consensus 210 ~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (317)
T cd07868 210 LTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPAD-KDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDS 288 (317)
T ss_pred HhCCCCccCCcccccccccccHHHHHHHHHhcCCCCh-HHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCCh
Confidence 999999964321 1122222 21111111 111110000000 00000 00000 0000012235
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1103 FLVDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1103 ~L~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
.+.+|+.+||++||.+|||++|+++|+||
T Consensus 289 ~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 289 KAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred HHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 68899999999999999999999999986
No 139
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=2.2e-34 Score=321.10 Aligned_cols=258 Identities=21% Similarity=0.349 Sum_probs=198.0
Q ss_pred CCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
++|++.+.||+|+||.||+|.+.+ ..+|+|+.. ... ....... +.+|+.+++.++||||+++++++
T Consensus 6 ~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~--~~~-~~~~~~~----~~~e~~~l~~l~~~~iv~~~~~~ 78 (277)
T cd05062 6 EKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVN--EAA-SMRERIE----FLNEASVMKEFNCHHVVRLLGVV 78 (277)
T ss_pred HHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecc--ccC-CHHHHHH----HHHHHHHHHhCCCCCeeeEEEEE
Confidence 468999999999999999998642 346666532 211 1222223 37899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----GEKHVSVKLALFIAQDVAAALVELHSKHIMHRD 953 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrD 953 (1141)
.+.. +.++||||+++++|.+++++.... ....+++..+..++.|++.||.|||+.|++|||
T Consensus 79 ~~~~--------------~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~d 144 (277)
T cd05062 79 SQGQ--------------PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRD 144 (277)
T ss_pred cCCC--------------CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCC
Confidence 7544 349999999999999999763221 023467889999999999999999999999999
Q ss_pred CCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHH
Q 001143 954 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIW 1033 (1141)
Q Consensus 954 LKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVW 1033 (1141)
|||+||+++.+ +.++|+|||++.......... ......+++.|+|||++.+ ..++.++|||
T Consensus 145 lkp~Nil~~~~-------~~~~l~dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~ 205 (277)
T cd05062 145 LAARNCMVAED-------FTVKIGDFGMTRDIYETDYYR--------KGGKGLLPVRWMSPESLKD----GVFTTYSDVW 205 (277)
T ss_pred cchheEEEcCC-------CCEEECCCCCccccCCcceee--------cCCCCccCHhhcChhHhhc----CCcCchhHHH
Confidence 99999999987 789999999987543211110 0112245778999999875 5678999999
Q ss_pred HHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001143 1034 SYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1112 (1141)
Q Consensus 1034 SLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL 1112 (1141)
||||++|||++ |..||.+....+....+.....+..+ ...+..+.+++.+||
T Consensus 206 slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l 258 (277)
T cd05062 206 SFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGLLDKP---------------------------DNCPDMLFELMRMCW 258 (277)
T ss_pred HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHc
Confidence 99999999999 78999887766666555443322111 134557899999999
Q ss_pred ccCCCCCCCHHHHHHHHH
Q 001143 1113 EENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1113 ~~DP~~RPSa~ElL~~L~ 1130 (1141)
+.||++|||+.|+++++.
T Consensus 259 ~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 259 QYNPKMRPSFLEIISSIK 276 (277)
T ss_pred CCChhhCcCHHHHHHHhh
Confidence 999999999999998864
No 140
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=3.2e-34 Score=322.20 Aligned_cols=263 Identities=24% Similarity=0.364 Sum_probs=202.0
Q ss_pred CCCceEeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~-----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
..+|.+.+.||+|+||.||++.. ....+.++++.+... .....+. +.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~ 77 (288)
T cd05093 4 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKD----FHREAELLTNLQHEHIVKFYGVCV 77 (288)
T ss_pred hHHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHH----HHHHHHHHHhCCCCCcceEEEEEe
Confidence 45789999999999999999985 223333333333321 2222333 378999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh--------cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE--------TGEKHVSVKLALFIAQDVAAALVELHSKHIMH 951 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~--------~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvH 951 (1141)
.... .++||||+++++|.+++..... .....+++..+..++.||+.||+|||++|++|
T Consensus 78 ~~~~--------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H 143 (288)
T cd05093 78 EGDP--------------LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVH 143 (288)
T ss_pred cCCc--------------cEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeee
Confidence 6543 3999999999999999975321 11235899999999999999999999999999
Q ss_pred cCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhh
Q 001143 952 RDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVD 1031 (1141)
Q Consensus 952 rDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksD 1031 (1141)
|||||+||+++.+ +.+||+|||.+......... .......+++.|+|||++.+ ..++.++|
T Consensus 144 ~dlkp~Nili~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~sD 204 (288)
T cd05093 144 RDLATRNCLVGEN-------LLVKIGDFGMSRDVYSTDYY--------RVGGHTMLPIRWMPPESIMY----RKFTTESD 204 (288)
T ss_pred cccCcceEEEccC-------CcEEeccCCccccccCCcee--------ecCCCCCccccccCHHHhcc----CCCCchhh
Confidence 9999999999887 78999999998754322111 01112346788999999876 56789999
Q ss_pred HHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001143 1032 IWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1110 (1141)
Q Consensus 1032 VWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~ 1110 (1141)
||||||++|+|++ |..||......+....+..+..+..+. ..+.++.+++.+
T Consensus 205 iwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~ 257 (288)
T cd05093 205 VWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPR---------------------------TCPKEVYDLMLG 257 (288)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCcCCCCC---------------------------CCCHHHHHHHHH
Confidence 9999999999998 999998777766666665543322110 334569999999
Q ss_pred hcccCCCCCCCHHHHHHHHHhhc
Q 001143 1111 CTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1111 cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
||+.||.+|||+.++++.+....
T Consensus 258 ~l~~~p~~Rpt~~~v~~~l~~~~ 280 (288)
T cd05093 258 CWQREPHMRLNIKEIHSLLQNLA 280 (288)
T ss_pred HccCChhhCCCHHHHHHHHHHHH
Confidence 99999999999999988876654
No 141
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=2.6e-34 Score=315.76 Aligned_cols=258 Identities=28% Similarity=0.419 Sum_probs=203.6
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||.|+||.||+|.+. +..+++|+... ........+. +..|+.++++++||||+++++++.....
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~~- 73 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDY--GNMTEKEKQQ----LVSEVNILRELKHPNIVRYYDRIIDRSN- 73 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEec--ccCCHHHHHH----HHHHHHHHHhcCCCccceeeeeeecCCC-
Confidence 5889999999999999999874 45566665432 2222333333 4789999999999999999998764321
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH-----HCCccccCCCCCCe
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH-----SKHIMHRDIKSENI 959 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLH-----s~gIvHrDLKP~NI 959 (1141)
...++||||+++++|.+++..... ...++++..++.++.||+.||.||| +.+|+||||||+||
T Consensus 74 -----------~~~~~~~e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~ni 141 (265)
T cd08217 74 -----------QTLYIVMEYCEGGDLAQLIQKCKK-ERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANI 141 (265)
T ss_pred -----------CEEEEEehhccCCCHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHE
Confidence 246999999999999999976432 2357999999999999999999999 89999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.+||+|||.+......... .....+++.|+|||++.+ ..++.++||||||+++
T Consensus 142 li~~~-------~~~kl~d~g~~~~~~~~~~~----------~~~~~~~~~~~~pE~~~~----~~~~~~~Dv~slG~il 200 (265)
T cd08217 142 FLDAN-------NNVKLGDFGLAKILGHDSSF----------AKTYVGTPYYMSPEQLNH----MSYDEKSDIWSLGCLI 200 (265)
T ss_pred EEecC-------CCEEEecccccccccCCccc----------ccccccCCCccChhhhcC----CCCCchhHHHHHHHHH
Confidence 99987 78999999998765432110 113358899999999876 4578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|+.||......++.+.+..+..+.++ ...+..+.+++.+||..+|++|
T Consensus 201 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~~~l~~~p~~R 253 (265)
T cd08217 201 YELCALSPPFTARNQLQLASKIKEGKFRRIP---------------------------YRYSSELNEVIKSMLNVDPDKR 253 (265)
T ss_pred HHHHHCCCcccCcCHHHHHHHHhcCCCCCCc---------------------------cccCHHHHHHHHHHccCCcccC
Confidence 9999999999877665555555444332221 1345678999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001143 1120 PTAGDLYEMFVA 1131 (1141)
Q Consensus 1120 PSa~ElL~~L~~ 1131 (1141)
|++.+|++|+|.
T Consensus 254 p~~~~il~~~~~ 265 (265)
T cd08217 254 PSTEELLQLPLI 265 (265)
T ss_pred CCHHHHhhCCCC
Confidence 999999999873
No 142
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=1.4e-34 Score=323.46 Aligned_cols=263 Identities=25% Similarity=0.408 Sum_probs=203.1
Q ss_pred ceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
|++.+.||+|+||.||+|.+......++++.+... .....+.+ .+|+.+++.++||||+++++++....
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~----~~e~~~l~~l~h~~ii~~~~~~~~~~----- 75 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDY----MVEIDILASCDHPNIVKLLDAFYYEN----- 75 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHH----HHHHHHHHHCCCCCeeeEEEEEeeCC-----
Confidence 68889999999999999998665554444444322 22333334 78999999999999999999987644
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 967 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~ 967 (1141)
..++||||+++++|..++.+ ...++++..+..++.||+.||.|||+.||+||||||+||+++.+
T Consensus 76 ---------~~~~v~e~~~~~~l~~~~~~----~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~--- 139 (282)
T cd06643 76 ---------NLWILIEFCAGGAVDAVMLE----LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLD--- 139 (282)
T ss_pred ---------EEEEEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccC---
Confidence 34999999999999988764 13468999999999999999999999999999999999999877
Q ss_pred CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHHHHhCC
Q 001143 968 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLELLTLQ 1046 (1141)
Q Consensus 968 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~ELLTGk 1046 (1141)
+.+||+|||++........ ......+++.|+|||++.... ....++.++|||||||++|+|++|+
T Consensus 140 ----~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~ 205 (282)
T cd06643 140 ----GDIKLADFGVSAKNTRTIQ----------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIE 205 (282)
T ss_pred ----CCEEEcccccccccccccc----------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCC
Confidence 7899999999865432111 112345899999999985321 2345778999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 001143 1047 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY 1126 (1141)
Q Consensus 1047 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL 1126 (1141)
.||...+..+....+.....+.... ....+..+.+++.+||+.||.+||++.+++
T Consensus 206 ~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~il 260 (282)
T cd06643 206 PPHHELNPMRVLLKIAKSEPPTLAQ-------------------------PSRWSSEFKDFLKKCLEKNVDARWTTTQLL 260 (282)
T ss_pred CCccccCHHHHHHHHhhcCCCCCCC-------------------------ccccCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 9998766655444443332221110 013456799999999999999999999999
Q ss_pred HHHHhhcCCC
Q 001143 1127 EMFVARTSSS 1136 (1141)
Q Consensus 1127 ~~L~~~~~s~ 1136 (1141)
+|+|+...+.
T Consensus 261 ~~~~~~~~~~ 270 (282)
T cd06643 261 QHPFVTVNSN 270 (282)
T ss_pred cCCCEeccCC
Confidence 9999986543
No 143
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=2.3e-34 Score=317.78 Aligned_cols=251 Identities=25% Similarity=0.351 Sum_probs=198.1
Q ss_pred CCCceEeeeecccCceEEEEEEECCc-cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSA-DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~-~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..+|++.+.||+|+||.||+|.+.+. .+|+|..+ ..... ...+ .+|+.++++++||||+++++++.....
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~--~~~~~---~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~ 73 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIK--EGSMS---EDEF----IEEAKVMMKLSHEKLVQLYGVCTKQRP 73 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEecCCCcEEEEEcC--CCccc---HHHH----HHHHHHHhcCCCCCeeeEEEEEccCCC
Confidence 45789999999999999999988554 47777643 21111 2233 789999999999999999999876543
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++++|.+++... ...+++..++.++.||+.||.|||+.|++|+||||+||+++.
T Consensus 74 --------------~~lv~e~~~~~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~ 135 (256)
T cd05113 74 --------------IYIVTEYMSNGCLLNYLREH----GKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDD 135 (256)
T ss_pred --------------cEEEEEcCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC
Confidence 39999999999999998751 226899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.++........ ......++..|+|||.+.+ ..++.++|||||||++|+|+
T Consensus 136 ~-------~~~kl~d~g~~~~~~~~~~~---------~~~~~~~~~~y~~pe~~~~----~~~~~~~Di~slG~~l~~l~ 195 (256)
T cd05113 136 Q-------GCVKVSDFGLSRYVLDDEYT---------SSVGSKFPVRWSPPEVLLY----SKFSSKSDVWAFGVLMWEVY 195 (256)
T ss_pred C-------CCEEECCCccceecCCCcee---------ecCCCccChhhCCHHHHhc----CcccchhHHHHHHHHHHHHh
Confidence 7 78999999998754321110 0112235678999999875 45789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |+.||......+....+..+..+..+. ..+..+.+++.+||+.||.+||++
T Consensus 196 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~cl~~~p~~Rp~~ 248 (256)
T cd05113 196 SLGKMPYERFNNSETVEKVSQGLRLYRPH---------------------------LASEKVYAIMYSCWHEKAEERPTF 248 (256)
T ss_pred cCCCCCcCcCCHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCcccCCCH
Confidence 9 999998776666666654443321110 234578999999999999999999
Q ss_pred HHHHHHH
Q 001143 1123 GDLYEMF 1129 (1141)
Q Consensus 1123 ~ElL~~L 1129 (1141)
.++++++
T Consensus 249 ~~ll~~~ 255 (256)
T cd05113 249 QQLLSSI 255 (256)
T ss_pred HHHHHhh
Confidence 9999875
No 144
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.3e-34 Score=317.55 Aligned_cols=264 Identities=22% Similarity=0.363 Sum_probs=202.5
Q ss_pred ceEeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~-----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
|++.+.||+|+||.||+|.+.. ..+|+|+.+.+ .........+ .+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLD--IHTYSEIEEF----LSEAACMKDFDHPNVMKLIGVCFEAS 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccC--cCCHHHHHHH----HHHHHHHHhCCCCCeeeEEeeeccCC
Confidence 5788999999999999998742 45777765432 2222333334 79999999999999999999876543
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. ......++||||+++++|..++..... .....+++..+..++.|++.||.|||+++|+||||||+||++
T Consensus 75 ~~--------~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~ 146 (273)
T cd05035 75 SL--------QKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCML 146 (273)
T ss_pred cc--------ccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEE
Confidence 21 112345999999999999999865321 123468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||.++........ .......++..|+|||++.+ ..++.++|||||||++||
T Consensus 147 ~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~----~~~~~~~Dv~SlG~il~e 207 (273)
T cd05035 147 RED-------MTVCVADFGLSKKIYSGDYY--------RQGRIAKMPVKWIAIESLAD----RVYTSKSDVWAFGVTMWE 207 (273)
T ss_pred CCC-------CeEEECCccceeeccccccc--------cccccccCCccccCHhhccc----CCCCcccchHHHHHHHHH
Confidence 887 78999999999765432111 01112235678999999865 567899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++ |..||.+....+..+.+..+..+..+ ...+..+.+++.+||+.||.+||
T Consensus 208 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp 260 (273)
T cd05035 208 IATRGQTPYPGVENHEIYDYLRHGNRLKQP---------------------------EDCLDELYDLMYSCWRADPKDRP 260 (273)
T ss_pred HHhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------cCCCHHHHHHHHHHcCCChhhCc
Confidence 999 89999887776666665544332211 14456799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
|+.|+++++..
T Consensus 261 ~~~e~~~~l~~ 271 (273)
T cd05035 261 TFTKLREVLEN 271 (273)
T ss_pred CHHHHHHHHHh
Confidence 99999998764
No 145
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=344.52 Aligned_cols=255 Identities=23% Similarity=0.376 Sum_probs=211.2
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEE--EecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFGSADAAAKV--RTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~~~vAvKI--~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
++..+||+|+|-+||+|.+..+.+.|+. +++..........+. +..|+.+|+.|+|||||++|+++.+...
T Consensus 43 k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR----~~~Ev~lLKsL~H~NIirfy~SW~d~~n--- 115 (632)
T KOG0584|consen 43 KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELER----LYSEVHLLKSLKHPNIIRFYDSWVDTDN--- 115 (632)
T ss_pred ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHH----HHHHHHHHccCCCCceeeeeeheecCCC---
Confidence 7778999999999999999766666553 222222223333344 4899999999999999999999987543
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCCCCCeeeecc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--HIMHRDIKSENILIDLE 964 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~--gIvHrDLKP~NILld~~ 964 (1141)
....+|+|++..|+|..|+++ .+..+.+.++.|++||++||.|||++ .|||||||-+||||+.+
T Consensus 116 ---------~~in~iTEL~TSGtLr~Y~kk-----~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~ 181 (632)
T KOG0584|consen 116 ---------KTINFITELFTSGTLREYRKK-----HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGN 181 (632)
T ss_pred ---------ceeeeeeecccCCcHHHHHHH-----hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCC
Confidence 245899999999999999988 35689999999999999999999987 69999999999999876
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
. |.|||+|+|+|+.+.... ...++|||.|||||++.. .|+..+||||||++++||+|
T Consensus 182 ~------G~VKIGDLGLAtl~r~s~------------aksvIGTPEFMAPEmYEE-----~YnE~VDVYaFGMCmLEMvT 238 (632)
T KOG0584|consen 182 L------GEVKIGDLGLATLLRKSH------------AKSVIGTPEFMAPEMYEE-----NYNELVDVYAFGMCMLEMVT 238 (632)
T ss_pred c------CceeecchhHHHHhhccc------------cceeccCccccChHHHhh-----hcchhhhhhhhhHHHHHHHh
Confidence 4 899999999998765422 234789999999999874 68999999999999999999
Q ss_pred CCCCCCC-CCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 LQVPYMG-LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 Gk~Pf~~-~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+.+||.. .++.++++++..|..|.-... -..+++++||.+||.. ..+|||+.
T Consensus 239 ~eYPYsEC~n~AQIYKKV~SGiKP~sl~k--------------------------V~dPevr~fIekCl~~-~~~R~sa~ 291 (632)
T KOG0584|consen 239 SEYPYSECTNPAQIYKKVTSGIKPAALSK--------------------------VKDPEVREFIEKCLAT-KSERLSAK 291 (632)
T ss_pred ccCChhhhCCHHHHHHHHHcCCCHHHhhc--------------------------cCCHHHHHHHHHHhcC-chhccCHH
Confidence 9999975 567889999988876643221 2245699999999999 99999999
Q ss_pred HHHHHHHhhcC
Q 001143 1124 DLYEMFVARTS 1134 (1141)
Q Consensus 1124 ElL~~L~~~~~ 1134 (1141)
|+|+++||...
T Consensus 292 eLL~d~Ff~~d 302 (632)
T KOG0584|consen 292 ELLKDPFFDED 302 (632)
T ss_pred HHhhChhhccc
Confidence 99999999864
No 146
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1.8e-34 Score=316.53 Aligned_cols=254 Identities=26% Similarity=0.398 Sum_probs=200.7
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|+||.||+|.+. +..+++|..... .......+. +.+|+.+++.++||||+++++.+....
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~----~~~e~~~l~~~~~~~i~~~~~~~~~~~-- 72 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVE--QMTKDERLA----AQNECQVLKLLSHPNIIEYYENFLEDK-- 72 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecc--ccccHHHHH----HHHHHHHHhhCCCCchhheeeeEecCC--
Confidence 5899999999999999999874 556677765432 222333333 478999999999999999999887544
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++... ....+++..+..++.|++.||+|||++||+||||||+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~ 137 (256)
T cd08220 73 ------------ALMIVMEYAPGGTLAEYIQKR---CNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKH 137 (256)
T ss_pred ------------EEEEEEecCCCCCHHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 349999999999999999762 23458999999999999999999999999999999999999755
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
. +.++|+|||.+....... ......++..|+|||.+.+ ..++.++||||||+++|+|++
T Consensus 138 ~------~~~~l~d~~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~~l~~l~~ 196 (256)
T cd08220 138 K------MVVKIGDFGISKILSSKS-----------KAYTVVGTPCYISPELCEG----KPYNQKSDIWALGCVLYELAS 196 (256)
T ss_pred C------CEEEEccCCCceecCCCc-----------cccccccCCcccCchhccC----CCCCcccchHHHHHHHHHHHh
Confidence 2 568999999997654321 1113457889999999875 456789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|..||...+.......+.......++. ..+..+.+++.+||..||.+|||+.|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rpt~~~ 249 (256)
T cd08220 197 LKRAFEAANLPALVLKIMSGTFAPISD---------------------------RYSPDLRQLILSMLNLDPSKRPQLSQ 249 (256)
T ss_pred CCCCcccCchHHHHHHHHhcCCCCCCC---------------------------CcCHHHHHHHHHHccCChhhCCCHHH
Confidence 999998766555554443332221111 34566899999999999999999999
Q ss_pred HHHHHHh
Q 001143 1125 LYEMFVA 1131 (1141)
Q Consensus 1125 lL~~L~~ 1131 (1141)
+++|+|+
T Consensus 250 ll~~p~~ 256 (256)
T cd08220 250 IMAQPIC 256 (256)
T ss_pred HhhCCCC
Confidence 9999874
No 147
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=2.8e-34 Score=327.34 Aligned_cols=257 Identities=19% Similarity=0.312 Sum_probs=198.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC--Cc----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SA----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~----~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
..+|++.+.||+|+||.||+|++. +. .+|+|+.. .. ......+. +.+|+.+++.++||||+++++++
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~--~~-~~~~~~~~----~~~e~~~l~~l~h~niv~~~g~~ 78 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR--EA-TSPKANKE----ILDEAYVMASVDNPHVCRLLGIC 78 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecc--cc-CCHHHHHH----HHHHHHHHHhCCCCCCCeEEEEE
Confidence 457999999999999999999873 22 25666543 21 11222233 47899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.... .++||||+++|+|.+++... ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 79 ~~~~---------------~~~v~e~~~~g~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~N 139 (316)
T cd05108 79 LTST---------------VQLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARN 139 (316)
T ss_pred cCCC---------------ceeeeecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhh
Confidence 6532 27999999999999998752 2358899999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||+++.+....... ......++..|+|||++.+ ..++.++|||||||+
T Consensus 140 ill~~~-------~~~kl~DfG~a~~~~~~~~~~--------~~~~~~~~~~y~apE~~~~----~~~~~~~Di~slGv~ 200 (316)
T cd05108 140 VLVKTP-------QHVKITDFGLAKLLGADEKEY--------HAEGGKVPIKWMALESILH----RIYTHQSDVWSYGVT 200 (316)
T ss_pred eEecCC-------CcEEEccccccccccCCCcce--------eccCCccceeecChHHhcc----CCCCchhhhHHHHHH
Confidence 999887 789999999998654322110 0111234678999999876 567899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|||++ |..||.+....+....+.....+..+ ..++..+.+++.+||..||.
T Consensus 201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~cl~~~p~ 253 (316)
T cd05108 201 VWELMTFGSKPYDGIPASEISSILEKGERLPQP---------------------------PICTIDVYMIMVKCWMIDAD 253 (316)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHhCCCCCCCC---------------------------CCCCHHHHHHHHHHccCChh
Confidence 999998 99999876665554444333221111 03445689999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001143 1118 ERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~ 1133 (1141)
+||++.+++.++....
T Consensus 254 ~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 254 SRPKFRELIIEFSKMA 269 (316)
T ss_pred hCcCHHHHHHHHHHHH
Confidence 9999999999877543
No 148
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.3e-34 Score=324.07 Aligned_cols=252 Identities=22% Similarity=0.279 Sum_probs=188.7
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 814 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 814 LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
||+|+||.||+++.. +..+|+|....+..... ... ..+..|++++++++||||+++++++....
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~-~~~----~~~~~E~~il~~l~hp~i~~~~~~~~~~~--------- 66 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKK-SGE----KMALLEKEILEKVNSPFIVNLAYAFESKT--------- 66 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcc-hhh----HHHHHHHHHHHhcCCCcEEEEEEEEecCC---------
Confidence 799999999999875 55667766432211111 111 12257999999999999999999987654
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 971 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~ 971 (1141)
+.++||||++|++|.+++.. .....+++..+..++.||+.||+|||+.||+||||||+||+++.+
T Consensus 67 -----~~~lv~e~~~g~~L~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~------- 131 (277)
T cd05607 67 -----HLCLVMSLMNGGDLKYHIYN---VGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQ------- 131 (277)
T ss_pred -----eEEEEEecCCCCCHHHHHHh---ccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCC-------
Confidence 34999999999999998865 233468999999999999999999999999999999999999887
Q ss_pred CeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001143 972 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1051 (1141)
Q Consensus 972 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~ 1051 (1141)
+.++|+|||++........ .....|++.|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 132 ~~~~l~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslGv~l~el~~g~~p~~~ 196 (277)
T cd05607 132 GNCRLSDLGLAVELKDGKT-----------ITQRAGTNGYMAPEILKE----EPYSYPVDWFAMGCSIYEMVAGRTPFKD 196 (277)
T ss_pred CCEEEeeceeeeecCCCce-----------eeccCCCCCccCHHHHcc----CCCCCchhHHHHHHHHHHHHhCCCCCCC
Confidence 7899999999875533111 112358999999999876 4588999999999999999999999975
Q ss_pred CCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH----HHHH
Q 001143 1052 LSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA----GDLY 1126 (1141)
Q Consensus 1052 ~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa----~ElL 1126 (1141)
.........+ ......... . .....+.++.+++.+||+.||.+||++ ++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~----------------------~--~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~ 252 (277)
T cd05607 197 HKEKVAKEELKRRTLEDEVK----------------------F--EHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPR 252 (277)
T ss_pred CcchhhHHHHHHHhhccccc----------------------c--ccccCCHHHHHHHHHHhccCHhhCCCCccchhhhh
Confidence 4321111111 100000000 0 001345678999999999999999999 6778
Q ss_pred HHHHhhc
Q 001143 1127 EMFVART 1133 (1141)
Q Consensus 1127 ~~L~~~~ 1133 (1141)
.|.|+..
T Consensus 253 ~h~~f~~ 259 (277)
T cd05607 253 KHEFFKT 259 (277)
T ss_pred cChhhcC
Confidence 9999964
No 149
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.3e-34 Score=323.64 Aligned_cols=280 Identities=21% Similarity=0.263 Sum_probs=197.8
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.++||+|+||.||+|++. +..+++|....+. .... ....+.+|+.++++++||||+++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~--~~~~----~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-- 72 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEG----VPSSALREICLLKELKHKNIVRLYDVLHSDK-- 72 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccc--cccc----CccchhHHHHHHHhcCCCCeeeHHHHhccCC--
Confidence 4889999999999999999984 5667777654332 1111 1122368999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 73 ------------~~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~ 135 (284)
T cd07839 73 ------------KLTLVFEYCD-QDLKKYFDSC----NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKN 135 (284)
T ss_pred ------------ceEEEEecCC-CCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCC
Confidence 3499999997 6888887641 3468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||++........ ......+++.|+|||++.+ ...++.++|||||||++|+|++
T Consensus 136 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l~t 195 (284)
T cd07839 136 -------GELKLADFGLARAFGIPVR----------CYSAEVVTLWYRPPDVLFG---AKLYSTSIDMWSAGCIFAELAN 195 (284)
T ss_pred -------CcEEECccchhhccCCCCC----------CcCCCccccCCcChHHHhC---CcccCcHHHHHHHHHHHHHHHh
Confidence 7899999999875433211 1112357889999999865 2356889999999999999999
Q ss_pred CCCCC-CCCCHHHHHHHHHhCCCCCchhHHhhhccCccc-cccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1045 LQVPY-MGLSELEIHDLIQMGKRPRLTDELEALGSCHEH-EVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1045 Gk~Pf-~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
|..|| .+.+..+....+...........+......... ..................++++.+++.+||+.||.+|||+
T Consensus 196 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~ 275 (284)
T cd07839 196 AGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISA 275 (284)
T ss_pred cCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCH
Confidence 98885 444444444443222111111111111000000 0000000000001112456788999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
+++++|+|+
T Consensus 276 ~~il~h~~f 284 (284)
T cd07839 276 EEALQHPYF 284 (284)
T ss_pred HHHhcCCCC
Confidence 999999986
No 150
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=2.6e-34 Score=324.86 Aligned_cols=259 Identities=25% Similarity=0.430 Sum_probs=201.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||.||+|.+. +..+++|...... . ...+. +.+|+.+++.+.||||+++++.+....
T Consensus 19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~--~--~~~~~----~~~e~~~l~~~~h~~v~~~~~~~~~~~ 90 (296)
T cd06654 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQ--Q--PKKEL----IINEILVMRENKNPNIVNYLDSYLVGD 90 (296)
T ss_pred ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCC--c--chHHH----HHHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence 457999999999999999999874 4566666544321 1 12223 378999999999999999999987644
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
+.++||||+++++|.+++.. ..+++.++..++.|++.||.|||+.||+||||||+||+++
T Consensus 91 --------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~ 150 (296)
T cd06654 91 --------------ELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150 (296)
T ss_pred --------------EEEEeecccCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc
Confidence 45999999999999999865 3588999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+........ ......+++.|+|||.+.+ ..++.++|||||||++|+|
T Consensus 151 ~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~s~Gvil~~l 209 (296)
T cd06654 151 MD-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEM 209 (296)
T ss_pred CC-------CCEEECccccchhcccccc----------ccCcccCCccccCHHHHcC----CCCCccchHHHHHHHHHHH
Confidence 77 7899999999865432110 1123458899999999876 4567999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||...........+.....+.... ....+..+.+++.+||..||++||++
T Consensus 210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~ 264 (296)
T cd06654 210 IEGEPPYLNENPLRALYLIATNGTPELQN-------------------------PEKLSAIFRDFLNRCLDMDVEKRGSA 264 (296)
T ss_pred HhCCCCCCCCCHHHhHHHHhcCCCCCCCC-------------------------ccccCHHHHHHHHHHCcCCcccCcCH
Confidence 99999998665533322222111111100 01345668999999999999999999
Q ss_pred HHHHHHHHhhcCCCC
Q 001143 1123 GDLYEMFVARTSSSI 1137 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s~~ 1137 (1141)
.++++|+|+....+.
T Consensus 265 ~eil~~~~~~~~~~~ 279 (296)
T cd06654 265 KELLQHQFLKIAKPL 279 (296)
T ss_pred HHHhhChhhhccCCc
Confidence 999999999765443
No 151
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=1.7e-34 Score=317.42 Aligned_cols=254 Identities=24% Similarity=0.359 Sum_probs=203.1
Q ss_pred CceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|+||.||++.. .+..+++|...... ......+.+ .+|+.++++++||||+++++++....
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISK--MSPKEREES----RKEVAVLSNMKHPNIVQYQESFEENG-- 72 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHh--CChHHHHHH----HHHHHHHHhCCCCCeeeeEeeecCCC--
Confidence 589999999999999999987 45567777654322 122223333 78999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
+.++||||+++++|.+++.. .....+++..+..|+.|++.||.|||++|++|+||+|+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~ 137 (256)
T cd08218 73 ------------NLYIVMDYCEGGDLYKKINA---QRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKD 137 (256)
T ss_pred ------------eEEEEEecCCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCC
Confidence 45999999999999999875 223358899999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+........ ......|++.|+|||++.+ ..++.++|||||||++++|++
T Consensus 138 -------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~~----~~~~~~~Dv~slG~i~~~l~~ 196 (256)
T cd08218 138 -------GTIKLGDFGIARVLNSTVE----------LARTCIGTPYYLSPEICEN----RPYNNKSDIWALGCVLYEMCT 196 (256)
T ss_pred -------CCEEEeeccceeecCcchh----------hhhhccCCccccCHHHhCC----CCCCCccchhHHHHHHHHHHc
Confidence 7899999999876533211 1123457889999999876 457789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||......+....+..+..+..+. ..+..+.+++.+||+.+|.+||++.+
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (256)
T cd08218 197 LKHAFEAGNMKNLVLKIIRGSYPPVSS---------------------------HYSYDLRNLVSQLFKRNPRDRPSVNS 249 (256)
T ss_pred CCCCccCCCHHHHHHHHhcCCCCCCcc---------------------------cCCHHHHHHHHHHhhCChhhCcCHHH
Confidence 999998776666665554444332211 34556999999999999999999999
Q ss_pred HHHHHHh
Q 001143 1125 LYEMFVA 1131 (1141)
Q Consensus 1125 lL~~L~~ 1131 (1141)
+++|+|+
T Consensus 250 vl~~~~~ 256 (256)
T cd08218 250 ILEKNFI 256 (256)
T ss_pred HhhCcCC
Confidence 9999885
No 152
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=3.4e-34 Score=315.64 Aligned_cols=249 Identities=25% Similarity=0.399 Sum_probs=200.2
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
..+|++.+.||+|+||.||++...+..+++|..+.. ...+.+ .+|+.++++++||||+++++++...+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~------~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~~- 73 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND------ATAQAF----LAEASVMTQLRHSNLVQLLGVIVEEKG- 73 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCC------chHHHH----HHHHHHHHhCCCCCeeeEEEEEEcCCC-
Confidence 567999999999999999999999988988875321 112233 789999999999999999998654321
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.++++. .....+++..+..++.||+.||+|||++||+||||||+||+++.+
T Consensus 74 ------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~ 138 (256)
T cd05082 74 ------------GLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSED 138 (256)
T ss_pred ------------ceEEEEECCCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCC
Confidence 34999999999999999875 223358899999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||++....... ....++..|+|||++.+ ..++.++|||||||++|+|++
T Consensus 139 -------~~~kl~dfg~~~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~i~~~l~~ 194 (256)
T cd05082 139 -------NVAKVSDFGLTKEASSTQ-------------DTGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEIYS 194 (256)
T ss_pred -------CcEEecCCccceeccccC-------------CCCccceeecCHHHHcc----CCCCchhhhHHHHHHHHHHHh
Confidence 789999999986543211 12234567999999875 567889999999999999998
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 -Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|+.||......+....+..+..+... ..++..+.+++.+||+.+|++|||+.
T Consensus 195 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rpt~~ 247 (256)
T cd05082 195 FGRVPYPRIPLKDVVPRVEKGYKMDAP---------------------------DGCPPVVYDVMKQCWHLDAATRPSFL 247 (256)
T ss_pred CCCCCCCCCCHHHHHHHHhcCCCCCCC---------------------------CCCCHHHHHHHHHHhcCChhhCcCHH
Confidence 99999876666665555443222111 14456799999999999999999999
Q ss_pred HHHHHHH
Q 001143 1124 DLYEMFV 1130 (1141)
Q Consensus 1124 ElL~~L~ 1130 (1141)
++++.+.
T Consensus 248 ~l~~~l~ 254 (256)
T cd05082 248 QLREQLE 254 (256)
T ss_pred HHHHHHh
Confidence 9998775
No 153
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3.7e-34 Score=322.10 Aligned_cols=265 Identities=23% Similarity=0.368 Sum_probs=203.0
Q ss_pred CCCceEeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
..+|.+.+.||+|+||.||+|.+.. ..+.+.++..+.. .....+. +.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~ 77 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP--TLAARKD----FQREAELLTNLQHEHIVKFYGVCG 77 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc--cHHHHHH----HHHHHHHHhcCCCCCcceEEEEEc
Confidence 4578999999999999999998532 2233333333321 1222233 378999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-----------cCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELHSKH 948 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-----------~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g 948 (1141)
.... .++||||+++++|.+++..... .....+++..++.++.||+.||+|||++|
T Consensus 78 ~~~~--------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ 143 (291)
T cd05094 78 DGDP--------------LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH 143 (291)
T ss_pred cCCc--------------eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 6543 4999999999999999975321 11235899999999999999999999999
Q ss_pred ccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001143 949 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1028 (1141)
Q Consensus 949 IvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1028 (1141)
|+||||||+||+++.+ +.++|+|||++......... .......++..|+|||++.+ ..++.
T Consensus 144 i~H~dlkp~Nil~~~~-------~~~~l~dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~ 204 (291)
T cd05094 144 FVHRDLATRNCLVGAN-------LLVKIGDFGMSRDVYSTDYY--------RVGGHTMLPIRWMPPESIMY----RKFTT 204 (291)
T ss_pred eeecccCcceEEEccC-------CcEEECCCCcccccCCCcee--------ecCCCCCcceeecChHHhcc----CCCCc
Confidence 9999999999999987 78999999998754332111 01123346788999999876 56788
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHH
Q 001143 1029 EVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1107 (1141)
Q Consensus 1029 ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1107 (1141)
++|||||||++|+|++ |+.||...+..+....+..+..+... ...+..+.++
T Consensus 205 ~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l 257 (291)
T cd05094 205 ESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQGRVLERP---------------------------RVCPKEVYDI 257 (291)
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhCCCCCCCC---------------------------ccCCHHHHHH
Confidence 9999999999999999 99999877766665555443322111 1345668999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~~~~~s 1135 (1141)
+.+||+.||.+|||+.++++.+.....+
T Consensus 258 i~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 258 MLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred HHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 9999999999999999999998776443
No 154
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.9e-34 Score=316.50 Aligned_cols=260 Identities=25% Similarity=0.420 Sum_probs=201.3
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+.+|++.++||+|+||.||+|++ .+..+++|....... ........ +.+|+.+++.++||||+++++++.+.+
T Consensus 1 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (267)
T cd08228 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM-MDAKARQD----CVKEIDLLKQLNHPNVIKYLDSFIEDN 75 (267)
T ss_pred CcceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc-CCHHHHHH----HHHHHHHHHhCCCcceeeeeeeEEECC
Confidence 36799999999999999999997 466777776432211 12222223 378999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++..... ....+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 76 --------------~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~ 140 (267)
T cd08228 76 --------------ELNIVLELADAGDLSQMIKYFKK-QKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT 140 (267)
T ss_pred --------------eEEEEEEecCCCcHHHHHHHhhh-ccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc
Confidence 34999999999999999875332 234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+........ ......+++.|+|||.+.+ ..++.++||||||+++|+|
T Consensus 141 ~~-------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~----~~~~~~~Di~slG~~l~el 199 (267)
T cd08228 141 AT-------GVVKLGDLGLGRFFSSKTT----------AAHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCLLYEM 199 (267)
T ss_pred CC-------CCEEECccccceeccchhH----------HHhcCCCCccccChhhhcc----CCCCchhhHHHHHHHHHHH
Confidence 87 7899999999876543211 0112358889999999876 4577899999999999999
Q ss_pred HhCCCCCCCCC--HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1043 LTLQVPYMGLS--ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1043 LTGk~Pf~~~~--~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
++|+.||.... ..+....+.....+... ....+..+.+++.+||+.+|.+||
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~cl~~~p~~Rp 253 (267)
T cd08228 200 AALQSPFYGDKMNLFSLCQKIEQCDYPPLP--------------------------TEHYSEKLRELVSMCIYPDPDQRP 253 (267)
T ss_pred hcCCCCCccccccHHHHHHHHhcCCCCCCC--------------------------hhhcCHHHHHHHHHHCCCCcccCc
Confidence 99999996542 23344444333322211 013456799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
++.++++.+..
T Consensus 254 ~~~~vl~~~~~ 264 (267)
T cd08228 254 DIGYVHQIAKQ 264 (267)
T ss_pred CHHHHHHHHHH
Confidence 99999998764
No 155
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=9.5e-35 Score=334.03 Aligned_cols=265 Identities=23% Similarity=0.283 Sum_probs=201.4
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|++. +..+|+|+...... ...... ..+.+|+.++..++||||+++++++.+..
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~----~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM-LKRAET----ACFREERDVLVNGDRRWITNLHYAFQDEN- 74 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH-hhhhhH----HHHHHHHHHHHhCCCCCCCceEEEEecCC-
Confidence 47999999999999999999984 56678887542110 011112 23478999999999999999999988655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+.|+||||++|++|.+++.+. ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~ 137 (331)
T cd05597 75 -------------NLYLVMDYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK 137 (331)
T ss_pred -------------eEEEEEecCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECC
Confidence 349999999999999999752 236899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC-CCCCCchhhHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-PNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~~~~s~ksDVWSLGviL~EL 1042 (1141)
+ +.+||+|||++..+..... .......||+.|+|||++..... ...++.++|||||||++|+|
T Consensus 138 ~-------~~~kl~Dfg~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el 201 (331)
T cd05597 138 N-------GHIRLADFGSCLRLLADGT---------VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEM 201 (331)
T ss_pred C-------CCEEEEECCceeecCCCCC---------ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHH
Confidence 7 7899999999865432111 01123468999999999874221 23567899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--C
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE--R 1119 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~--R 1119 (1141)
++|+.||.+.+..+....+..... ..++ ......+..+++++.+||..++.+ |
T Consensus 202 ~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~~li~~ll~~~~~r~~r 257 (331)
T cd05597 202 LYGETPFYAESLVETYGKIMNHKEHFQFP------------------------PDVTDVSEEAKDLIRRLICSPETRLGR 257 (331)
T ss_pred hhCCCCCCCCCHHHHHHHHHcCCCcccCC------------------------CccCCCCHHHHHHHHHHccCcccccCC
Confidence 999999987766665555432211 1100 000135667899999988664444 7
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
|++.++++|+|+..
T Consensus 258 ~~~~~~l~hp~~~~ 271 (331)
T cd05597 258 NGLQDFKDHPFFEG 271 (331)
T ss_pred CCHHHHhcCCCCCC
Confidence 89999999999854
No 156
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=1.8e-34 Score=320.05 Aligned_cols=262 Identities=25% Similarity=0.393 Sum_probs=198.0
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~ 883 (1141)
.|++.+.||+|+||.||+|.+. +..+++|+.... ... ...+ .+|+.++.++ +||||+++++++.....
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~--~~~---~~~~----~~e~~~l~~~~~h~~i~~~~~~~~~~~~ 77 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT--GDE---EEEI----KQEINMLKKYSHHRNIATYYGAFIKKNP 77 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC--Ccc---HHHH----HHHHHHHHHhcCCCCeeeEeeEEeecCC
Confidence 4788899999999999999884 455666665422 111 1223 6899999998 69999999999875431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.......++||||+++++|.+++.. .....+++..+..++.||+.||+|||+++|+||||||+||+++.
T Consensus 78 --------~~~~~~~~iv~e~~~~~~L~~~l~~---~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~ 146 (272)
T cd06637 78 --------PGMDDQLWLVMEFCGAGSVTDLIKN---TKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTE 146 (272)
T ss_pred --------CCCCcEEEEEEEcCCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECC
Confidence 1112357999999999999999875 22346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~EL 1042 (1141)
+ +.++|+|||++........ ......|++.|+|||++.+.. ....++.++|||||||++|+|
T Consensus 147 ~-------~~~~l~Dfg~~~~~~~~~~----------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el 209 (272)
T cd06637 147 N-------AEVKLVDFGVSAQLDRTVG----------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEM 209 (272)
T ss_pred C-------CCEEEccCCCceecccccc----------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHH
Confidence 7 7899999999875432111 112346899999999986421 124578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||...........+.....+.. .....+..+.+|+.+||..||.+|||+
T Consensus 210 ~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~ 263 (272)
T cd06637 210 AEGAPPLCDMHPMRALFLIPRNPAPRL--------------------------KSKKWSKKFQSFIESCLVKNHSQRPTT 263 (272)
T ss_pred HhCCCCccccCHHHHHHHHhcCCCCCC--------------------------CCCCcCHHHHHHHHHHcCCChhhCCCH
Confidence 999999976544333222211111000 001345678999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.++++|+|+
T Consensus 264 ~~il~~~~~ 272 (272)
T cd06637 264 EQLMKHPFI 272 (272)
T ss_pred HHHhhCCCC
Confidence 999999986
No 157
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=4e-34 Score=314.43 Aligned_cols=254 Identities=27% Similarity=0.400 Sum_probs=202.6
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|+||.||.++.. +..+++|..... .......+.+ .+|++++++++|+||+++++++.+..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~----~~e~~~l~~~~h~~i~~~~~~~~~~~-- 72 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLT--RLSEKERRDA----LNEIVILSLLQHPNIIAYYNHFMDDN-- 72 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeec--ccchhHHHHH----HHHHHHHHhCCCCCeeEEEeEEecCC--
Confidence 5899999999999999988874 555666664433 2223333334 78999999999999999999998654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++... ....+++..+..++.|++.||.|||+.|++||||+|+||+++.+
T Consensus 73 ------------~~~~~~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~ 137 (256)
T cd08221 73 ------------TLLIEMEYANGGTLYDKIVRQ---KGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKA 137 (256)
T ss_pred ------------eEEEEEEecCCCcHHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCC
Confidence 349999999999999999762 23468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||.+........ ......+++.|+|||++.+ ..++.++||||||+++|+|++
T Consensus 138 -------~~~kl~d~~~~~~~~~~~~----------~~~~~~~~~~y~ape~~~~----~~~~~~~Dv~slG~i~~~l~~ 196 (256)
T cd08221 138 -------GLIKLGDFGISKILGSEYS----------MAETVVGTPYYMSPELCQG----VKYNFKSDIWALGCVLYELLT 196 (256)
T ss_pred -------CCEEECcCcceEEcccccc----------cccccCCCccccCHhhcCC----CCCCCcchhHHHHHHHHHHHH
Confidence 7899999999876533211 1123458999999999876 456789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|..||......+....+..+..+... ...+..+.+++.+||..+|.+||++.+
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~R~s~~~ 249 (256)
T cd08221 197 LKRTFDATNPLNLVVKIVQGNYTPVV---------------------------SVYSSELISLVHSLLQQDPEKRPTADE 249 (256)
T ss_pred CCCCCCCCCHHHHHHHHHcCCCCCCc---------------------------cccCHHHHHHHHHHcccCcccCCCHHH
Confidence 99999876666666555443322111 144567899999999999999999999
Q ss_pred HHHHHHh
Q 001143 1125 LYEMFVA 1131 (1141)
Q Consensus 1125 lL~~L~~ 1131 (1141)
+++++|.
T Consensus 250 ll~~~~l 256 (256)
T cd08221 250 VLDQPLL 256 (256)
T ss_pred HhhCcCC
Confidence 9999863
No 158
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=5e-34 Score=316.11 Aligned_cols=256 Identities=22% Similarity=0.355 Sum_probs=200.4
Q ss_pred CCCceEeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
.++|++.+.||+|+||.||+|.+.. ..+++|+. +... .......+ .+|+.++++++||||+++++++.
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~--~~~~-~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~ 75 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTL--KAGS-SDKQRLDF----LTEASIMGQFDHPNIIRLEGVVT 75 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEc--CCCC-ChHHHHHH----HHHHHHHHhCCCCCcceEeEEEe
Confidence 4579999999999999999999842 24566653 3221 22223333 78999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+... .++||||+++++|.+++... ...+++..+..++.|++.||.|||+++|+||||||+||
T Consensus 76 ~~~~--------------~~iv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~ni 137 (266)
T cd05033 76 KSRP--------------VMIITEYMENGSLDKFLREN----DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNI 137 (266)
T ss_pred cCCc--------------eEEEEEcCCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceE
Confidence 6543 49999999999999998751 23689999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.++|+|||.+......... .......++..|+|||.+.+ ..++.++||||||+++
T Consensus 138 li~~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~~Pe~~~~----~~~~~~~Dv~slG~~l 198 (266)
T cd05033 138 LVNSN-------LVCKVSDFGLSRRLEDSEAT--------YTTKGGKIPIRWTAPEAIAY----RKFTSASDVWSFGIVM 198 (266)
T ss_pred EEcCC-------CCEEECccchhhcccccccc--------eeccCCCCCccccChhhhcc----CCCccccchHHHHHHH
Confidence 99887 78999999999876421111 00112235678999999876 5678999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+|++ |..||......+....+........+ ...+..+.+++.+||+.+|++
T Consensus 199 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~~p~~ 251 (266)
T cd05033 199 WEVMSYGERPYWDMSNQDVIKAVEDGYRLPPP---------------------------MDCPSALYQLMLDCWQKDRNE 251 (266)
T ss_pred HHHHccCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcCCCccc
Confidence 99998 99999876666666665443222111 134567899999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001143 1119 RPTAGDLYEMFVA 1131 (1141)
Q Consensus 1119 RPSa~ElL~~L~~ 1131 (1141)
||++.++++++..
T Consensus 252 Rp~~~ei~~~l~~ 264 (266)
T cd05033 252 RPTFSQIVSTLDK 264 (266)
T ss_pred CcCHHHHHHHHHh
Confidence 9999999998864
No 159
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=1.3e-34 Score=323.27 Aligned_cols=262 Identities=29% Similarity=0.487 Sum_probs=206.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||+|+||.||+|.+. +..+++|+.... .....+.+ .+|+.++++++||||+++++++....
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE----SEEELEDF----MVEIDILSECKHPNIVGLYEAYFYEN 75 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC----CHHHHHHH----HHHHHHHHhCCCCceeEEEEEEecCC
Confidence 457999999999999999999984 556777765432 22333344 78999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++
T Consensus 76 --------------~~~lv~e~~~~~~L~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~ 137 (280)
T cd06611 76 --------------KLWILIEFCDGGALDSIMLEL----ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT 137 (280)
T ss_pred --------------eEEEEeeccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC
Confidence 349999999999999998752 24699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~E 1041 (1141)
.+ +.++|+|||.+........ ......+++.|+|||.+.... ....++.++||||||+++|+
T Consensus 138 ~~-------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~ 200 (280)
T cd06611 138 LD-------GDVKLADFGVSAKNKSTLQ----------KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIE 200 (280)
T ss_pred CC-------CCEEEccCccchhhccccc----------ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHH
Confidence 87 7899999998765432111 112345889999999986321 22456789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|++|+.||......+....+..+..+.+.. ....+.++.+++.+||+.||.+||+
T Consensus 201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~~p~~Rps 255 (280)
T cd06611 201 LAQMEPPHHELNPMRVLLKILKSEPPTLDQ-------------------------PSKWSSSFNDFLKSCLVKDPDDRPT 255 (280)
T ss_pred HHhCCCCcccCCHHHHHHHHhcCCCCCcCC-------------------------cccCCHHHHHHHHHHhccChhhCcC
Confidence 999999998766655554444333222110 0134567899999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
+.++++|+|+...
T Consensus 256 ~~~il~~~~~~~~ 268 (280)
T cd06611 256 AAELLKHPFVSDQ 268 (280)
T ss_pred HHHHhcChhhccc
Confidence 9999999999765
No 160
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.2e-34 Score=322.10 Aligned_cols=258 Identities=24% Similarity=0.403 Sum_probs=196.8
Q ss_pred CCCceEeeeecccCceEEEEEEECCc--c--EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSA--D--AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~--~--vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~ 879 (1141)
|++|++.++||+|+||.||+|.+... . +++|. ++.. ......+. +.+|+.++.++ +||||+++++++.
T Consensus 1 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~--~~~~-~~~~~~~~----~~~E~~~l~~l~~hp~iv~~~~~~~ 73 (297)
T cd05089 1 WEDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKM--LKEF-ASENDHRD----FAGELEVLCKLGHHPNIINLLGACE 73 (297)
T ss_pred CccceeeeeecCCCcceEEEEEecCCCCcceeEEEE--cccc-CCHHHHHH----HHHHHHHHHhhcCCCchhheEEEEc
Confidence 56899999999999999999987432 2 34444 3321 12222233 37899999999 6999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVELHSKH 948 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----------~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g 948 (1141)
.... .++||||+++++|.++++..... ....+++..+..|+.||+.||+|||++|
T Consensus 74 ~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ 139 (297)
T cd05089 74 NRGY--------------LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ 139 (297)
T ss_pred cCCc--------------ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 6543 39999999999999999752210 1135889999999999999999999999
Q ss_pred ccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001143 949 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1028 (1141)
Q Consensus 949 IvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1028 (1141)
|+||||||+|||++.+ +.+||+|||++....... .......+..|+|||++.+ ..++.
T Consensus 140 ivH~dlkp~Nill~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~ 197 (297)
T cd05089 140 FIHRDLAARNVLVGEN-------LASKIADFGLSRGEEVYV-----------KKTMGRLPVRWMAIESLNY----SVYTT 197 (297)
T ss_pred cccCcCCcceEEECCC-------CeEEECCcCCCcccccee-----------ccCCCCcCccccCchhhcc----CCCCc
Confidence 9999999999999877 789999999985322110 0011123557999999875 56789
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHH
Q 001143 1029 EVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1107 (1141)
Q Consensus 1029 ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1107 (1141)
++|||||||++|||++ |..||......+....+..+..+..+ ...+..+.+|
T Consensus 198 ~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l 250 (297)
T cd05089 198 KSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRMEKP---------------------------RNCDDEVYEL 250 (297)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCC---------------------------CCCCHHHHHH
Confidence 9999999999999998 99999887776666555433222111 1345678999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
+.+||+.+|.+||+++++++.+...
T Consensus 251 i~~~l~~~p~~Rp~~~~i~~~l~~~ 275 (297)
T cd05089 251 MRQCWRDRPYERPPFAQISVQLSRM 275 (297)
T ss_pred HHHHcCCChhhCcCHHHHHHHHHHH
Confidence 9999999999999999998887543
No 161
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=4.2e-34 Score=322.05 Aligned_cols=286 Identities=21% Similarity=0.229 Sum_probs=205.7
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|++|.||+|.+. +..+++|.......... .......+..|+.++++++||||+++++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~---~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-- 75 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEA---KDGINFTALREIKLLQELKHPNIIGLLDVFGHKS-- 75 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccc---cchhhHHHHHHHHHHhhcCCCCChhhhheeecCC--
Confidence 4888999999999999999974 56788887654322111 1112233468999999999999999999988644
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+ +++|.+++.. . ...+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 76 ------------~~~lv~e~~-~~~L~~~i~~---~-~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~ 138 (298)
T cd07841 76 ------------NINLVFEFM-ETDLEKVIKD---K-SIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASD 138 (298)
T ss_pred ------------EEEEEEccc-CCCHHHHHhc---c-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCC
Confidence 349999999 8999999975 1 1369999999999999999999999999999999999999987
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||++........ ......+++.|+|||.+.+ ...++.++|||||||++|+|++
T Consensus 139 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~il~e~~~ 198 (298)
T cd07841 139 -------GVLKLADFGLARSFGSPNR----------KMTHQVVTRWYRAPELLFG---ARHYGVGVDMWSVGCIFAELLL 198 (298)
T ss_pred -------CCEEEccceeeeeccCCCc----------cccccccceeeeCHHHHhC---CCCCCcHHHHHHHHHHHHHHHc
Confidence 7899999999876543211 1112346788999999864 2456889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|.+||.+....+....+...........+...........................+..+.+++.+||++||++|||+.|
T Consensus 199 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e 278 (298)
T cd07841 199 RVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQ 278 (298)
T ss_pred CCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHH
Confidence 98888776655544444222111111111110000000000000011111111245678999999999999999999999
Q ss_pred HHHHHHhhcC
Q 001143 1125 LYEMFVARTS 1134 (1141)
Q Consensus 1125 lL~~L~~~~~ 1134 (1141)
+++|.|+...
T Consensus 279 ~l~~~~~~~~ 288 (298)
T cd07841 279 ALEHPYFSND 288 (298)
T ss_pred HhhCccccCC
Confidence 9999999864
No 162
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4e-34 Score=314.55 Aligned_cols=250 Identities=26% Similarity=0.332 Sum_probs=199.2
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.++||+|+||.||++.+. +..+++|.++... .....+.+ .+|+.+++.++||||+++++.+.+..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~-- 71 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK---SSSAVEDS----RKEAVLLAKMKHPNIVAFKESFEADG-- 71 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc---chHHHHHH----HHHHHHHHhCCCCCcceEEEEEEECC--
Confidence 5889999999999999999974 5667777654332 12222333 68999999999999999999988655
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.. .....+++..+..++.||+.||.|||++||+|+||||+||+++.+
T Consensus 72 ------------~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~ 136 (255)
T cd08219 72 ------------HLYIVMEYCDGGDLMQKIKL---QRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQN 136 (255)
T ss_pred ------------EEEEEEeeCCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCC
Confidence 34999999999999998865 223468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++++|||.+........ ......|++.|+|||++.+ ..++.++||||||+++|+|++
T Consensus 137 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~----~~~~~~~Dv~slG~i~~~l~~ 195 (255)
T cd08219 137 -------GKVKLGDFGSARLLTSPGA----------YACTYVGTPYYVPPEIWEN----MPYNNKSDIWSLGCILYELCT 195 (255)
T ss_pred -------CcEEEcccCcceeeccccc----------ccccccCCccccCHHHHcc----CCcCchhhhhhhchhheehhh
Confidence 7899999999865533211 1123458889999999876 457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|..||...+.......+..+.....+. ..+..+.+++.+||+.||.+||++.+
T Consensus 196 g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~P~~Rp~~~~ 248 (255)
T cd08219 196 LKHPFQANSWKNLILKVCQGSYKPLPS---------------------------HYSYELRSLIKQMFKRNPRSRPSATT 248 (255)
T ss_pred ccCCCCCCCHHHHHHHHhcCCCCCCCc---------------------------ccCHHHHHHHHHHHhCCcccCCCHHH
Confidence 999998776665555554443322211 33456899999999999999999999
Q ss_pred HHHH
Q 001143 1125 LYEM 1128 (1141)
Q Consensus 1125 lL~~ 1128 (1141)
++..
T Consensus 249 il~~ 252 (255)
T cd08219 249 ILSR 252 (255)
T ss_pred Hhhc
Confidence 9864
No 163
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=2.9e-34 Score=316.51 Aligned_cols=252 Identities=23% Similarity=0.355 Sum_probs=200.6
Q ss_pred CCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.+|++.++||.|+||.||+|.+. +..+++|+.... .......+ ..|+.+++.++||||+++++++.+...
T Consensus 6 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~----~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~~- 76 (261)
T cd05148 6 EEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSD----DLLKQQDF----QKEVQALKRLRHKHLISLFAVCSVGEP- 76 (261)
T ss_pred HHHHHhhhhccCCCccEEEeEecCCCcEEEEecccc----chhhHHHH----HHHHHHHhcCCCcchhheeeeEecCCC-
Confidence 46899999999999999999985 456677764322 11122233 789999999999999999999876553
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.++||||+++++|.++++. .....+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 77 -------------~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~ 140 (261)
T cd05148 77 -------------VYIITELMEKGSLLAFLRS---PEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGED 140 (261)
T ss_pred -------------eEEEEeecccCCHHHHHhc---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCC
Confidence 4999999999999999976 223468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||.+......... .....++..|+|||++.. ..++.++||||||+++|+|++
T Consensus 141 -------~~~kl~d~g~~~~~~~~~~~----------~~~~~~~~~~~~PE~~~~----~~~~~~~DiwslG~~l~~l~~ 199 (261)
T cd05148 141 -------LVCKVADFGLARLIKEDVYL----------SSDKKIPYKWTAPEAASH----GTFSTKSDVWSFGILLYEMFT 199 (261)
T ss_pred -------ceEEEccccchhhcCCcccc----------ccCCCCceEecCHHHHcc----CCCCchhhHHHHHHHHHHHHc
Confidence 78999999999765332111 112235678999999875 467889999999999999998
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 -Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|+.||...+..+....+..+..+..+ ...++.+.+++.+||+.||.+|||+.
T Consensus 200 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~ 252 (261)
T cd05148 200 YGQVPYPGMNNHEVYDQITAGYRMPCP---------------------------AKCPQEIYKIMLECWAAEPEDRPSFK 252 (261)
T ss_pred CCCCCCCcCCHHHHHHHHHhCCcCCCC---------------------------CCCCHHHHHHHHHHcCCCchhCcCHH
Confidence 89999877766666665433222111 14456789999999999999999999
Q ss_pred HHHHHHH
Q 001143 1124 DLYEMFV 1130 (1141)
Q Consensus 1124 ElL~~L~ 1130 (1141)
++++.|.
T Consensus 253 ~l~~~L~ 259 (261)
T cd05148 253 ALREELD 259 (261)
T ss_pred HHHHHHh
Confidence 9999875
No 164
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=358.04 Aligned_cols=268 Identities=26% Similarity=0.403 Sum_probs=216.4
Q ss_pred CCCCCCCCceEeeeecccCceEEEEEEEC---Cc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccce
Q 001143 800 LDPGSFPSLSSCDEAGKSVSSSLFRCKFG---SA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 874 (1141)
Q Consensus 800 ~~~~~~~~y~i~~~LG~GsfG~Vy~a~~~---~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl 874 (1141)
++.......++.+.||+|+||.||.|... +. .+.|++|.++... ...+..+| ++|..+|++++|||||++
T Consensus 686 lp~v~~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~-~~~~~~~F----l~Ea~~m~~f~HpNiv~l 760 (1025)
T KOG1095|consen 686 LPEVPRKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLS-SEQEVSDF----LKEALLMSKFDHPNIVSL 760 (1025)
T ss_pred cccCChhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccC-CHHHHHHH----HHHHHHHhcCCCcceeeE
Confidence 34455666799999999999999999873 22 5667777776533 33444555 899999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIMHR 952 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~--~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHr 952 (1141)
+|++.+... .+|++|||+||+|..+|++.+.. ....++..+.+.++.|||+|++||+++++|||
T Consensus 761 iGv~l~~~~--------------~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHR 826 (1025)
T KOG1095|consen 761 IGVCLDSGP--------------PLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHR 826 (1025)
T ss_pred EEeecCCCC--------------cEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCc
Confidence 999887443 39999999999999999975332 14469999999999999999999999999999
Q ss_pred CCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001143 953 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1032 (1141)
Q Consensus 953 DLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1032 (1141)
||-+.|+|++.. ..|||+|||+|+.+....... .+ ....-...|||||.+.. ..++.|+||
T Consensus 827 DLAaRNCLL~~~-------r~VKIaDFGlArDiy~~~yyr--~~------~~a~lPvkWm~PEsl~d----~iFtskSDv 887 (1025)
T KOG1095|consen 827 DLAARNCLLDER-------RVVKIADFGLARDIYDKDYYR--KH------GEAMLPVKWMPPESLKD----GIFTSKSDV 887 (1025)
T ss_pred chhhhheeeccc-------CcEEEcccchhHhhhhchhee--cc------CccccceecCCHHHHhh----cccccccch
Confidence 999999999987 789999999998543322111 00 01124568999999997 689999999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001143 1033 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1111 (1141)
Q Consensus 1033 WSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~c 1111 (1141)
|||||++||++| |..||.+.+..++...+..+.+...+ ..+++.+.++|..|
T Consensus 888 WsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P---------------------------~~CP~~ly~lM~~C 940 (1025)
T KOG1095|consen 888 WSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPP---------------------------SYCPEKLYQLMLQC 940 (1025)
T ss_pred hhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCC---------------------------CCCChHHHHHHHHH
Confidence 999999999999 89999999999888866555543222 16778899999999
Q ss_pred cccCCCCCCCHHHHHHHHHhh
Q 001143 1112 TEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1112 L~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
|+.+|++||++..|++.+...
T Consensus 941 W~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 941 WKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred ccCChhhCccHHHHHhhhhhh
Confidence 999999999999999976554
No 165
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=3.4e-34 Score=316.94 Aligned_cols=262 Identities=26% Similarity=0.356 Sum_probs=201.5
Q ss_pred CceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
+|++.+.||+|+||.||+|.. .+..+++|+...+.. ...........+.+|+.++++++|+||+++++++.+..
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~--~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 75 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTS--NVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN--- 75 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCcc--chhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC---
Confidence 478899999999999999987 456688887554322 11222222345689999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
..++||||+++++|.+++.+ ...+++..+..++.|++.||+|||+.+|+|+||+|+||+++.+
T Consensus 76 -----------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~- 138 (265)
T cd06631 76 -----------TISIFMEFVPGGSISSILNR-----FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPN- 138 (265)
T ss_pred -----------eEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCC-
Confidence 34999999999999999975 2358899999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.++|+|||.+........... .........|+..|+|||++.+ ..++.++|||||||++|+|++|
T Consensus 139 ------~~~~l~dfg~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~pe~~~~----~~~~~~~Dv~slG~~~~~l~~g 204 (265)
T cd06631 139 ------GIIKLIDFGCARRLAWVGLHGT----HSNMLKSMHGTPYWMAPEVINE----SGYGRKSDIWSIGCTVFEMATG 204 (265)
T ss_pred ------CeEEeccchhhHhhhhcccccc----ccccccccCCCccccChhhhcC----CCCcchhhHHHHHHHHHHHHhC
Confidence 7899999999875432111100 0011123458999999999876 4577999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhC--CCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1046 QVPYMGLSELEIHDLIQMG--KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~--~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+.||...+.......+... ..+.+ ....+.++.+++.+||+.+|.+||++.
T Consensus 205 ~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~ 257 (265)
T cd06631 205 KPPLASMDRLAAMFYIGAHRGLMPRL---------------------------PDSFSAAAIDFVTSCLTRDQHERPSAL 257 (265)
T ss_pred CCccccCChHHHHHHhhhccCCCCCC---------------------------CCCCCHHHHHHHHHHhcCCcccCCCHH
Confidence 9999765544333222211 11111 114556789999999999999999999
Q ss_pred HHHHHHHh
Q 001143 1124 DLYEMFVA 1131 (1141)
Q Consensus 1124 ElL~~L~~ 1131 (1141)
++++|+|+
T Consensus 258 ~~l~~~~~ 265 (265)
T cd06631 258 QLLRHDFL 265 (265)
T ss_pred HHhcCCCC
Confidence 99999885
No 166
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=4.5e-34 Score=318.95 Aligned_cols=281 Identities=23% Similarity=0.297 Sum_probs=201.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|++|.||+|++. +..+++|+..... ......+ .+.+|+.++++++||||+++++++....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~----~~~~e~~~l~~~~h~~i~~~~~~~~~~~- 73 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESE--DDPVIKK----IALREIRMLKQLKHPNLVNLIEVFRRKR- 73 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecc--cCccccH----HHHHHHHHHHhCCCCCEeeeeeEEeeCC-
Confidence 46899999999999999999985 5667777654221 1111112 2378999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||++++.|..++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 74 -------------~~~~v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~ 135 (286)
T cd07847 74 -------------KLHLVFEYCDHTVLNELEKN-----PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITK 135 (286)
T ss_pred -------------EEEEEEeccCccHHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcC
Confidence 34999999998888777654 235899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||.+........ ......++..|+|||++.+ ...++.++||||||+++|+|+
T Consensus 136 ~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~i~~~l~ 195 (286)
T cd07847 136 Q-------GQIKLCDFGFARILTGPGD----------DYTDYVATRWYRAPELLVG---DTQYGPPVDVWAIGCVFAELL 195 (286)
T ss_pred C-------CcEEECccccceecCCCcc----------cccCcccccccCCHHHHhC---CCCcCchhhhHHHHHHHHHHH
Confidence 7 7899999999976543211 1112347889999999865 235678999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcc-Cccc--cccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGS-CHEH--EVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|+.||.+....+....+................. .... ..................+..+.+|+.+||+.||++||
T Consensus 196 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 275 (286)
T cd07847 196 TGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERL 275 (286)
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccC
Confidence 99999987665554433322211111110000000 0000 00000000000001124467799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
++.|++.|+||
T Consensus 276 ~~~eil~~~~f 286 (286)
T cd07847 276 SCEELLEHPYF 286 (286)
T ss_pred CHHHHhcCCCC
Confidence 99999999986
No 167
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=2.2e-34 Score=323.58 Aligned_cols=259 Identities=22% Similarity=0.295 Sum_probs=196.2
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|++.++||+|+||.||+|.+. +..+|+|...... .... .....+.+|+.++++++|+||+.+++.+.+.+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~--~~~~---~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-- 73 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKR--IKKR---KGESMALNEKQILEKVNSRFVVSLAYAYETKD-- 73 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhh--ccch---HHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC--
Confidence 3788899999999999999985 4567777543221 1111 11123368999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.. .+...+++..+..++.|++.||.|||+.||+||||||+||+++.+
T Consensus 74 ------------~~~lv~e~~~g~~L~~~l~~---~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~ 138 (285)
T cd05630 74 ------------ALCLVLTLMNGGDLKFHIYH---MGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDH 138 (285)
T ss_pred ------------EEEEEEEecCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCC
Confidence 34999999999999999865 223468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||++....... ......|+..|+|||++.+ ..++.++|||||||++|+|++
T Consensus 139 -------~~~~l~Dfg~~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~----~~~~~~~DiwslG~~l~~l~~ 196 (285)
T cd05630 139 -------GHIRISDLGLAVHVPEGQ-----------TIKGRVGTVGYMAPEVVKN----ERYTFSPDWWALGCLLYEMIA 196 (285)
T ss_pred -------CCEEEeeccceeecCCCc-----------cccCCCCCccccChHHHcC----CCCCCccccHHHHHHHHHHHh
Confidence 789999999986543211 0112368999999999876 567899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC---
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT--- 1121 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS--- 1121 (1141)
|+.||...........+..... .... . .....+..+.+|+.+||+.||.+|||
T Consensus 197 g~~Pf~~~~~~~~~~~~~~~~~-~~~~------------------~-----~~~~~~~~~~~li~~~l~~~p~~R~s~~~ 252 (285)
T cd05630 197 GQSPFQQRKKKIKREEVERLVK-EVQE------------------E-----YSEKFSPDARSLCKMLLCKDPKERLGCQG 252 (285)
T ss_pred CCCCCCCCCccchHHHHHhhhh-hhhh------------------h-----cCccCCHHHHHHHHHHhhcCHHHccCCCC
Confidence 9999976432111111110000 0000 0 00134566899999999999999999
Q ss_pred --HHHHHHHHHhhc
Q 001143 1122 --AGDLYEMFVART 1133 (1141)
Q Consensus 1122 --a~ElL~~L~~~~ 1133 (1141)
+.|+++|+|+..
T Consensus 253 ~~~~~~~~h~~~~~ 266 (285)
T cd05630 253 GGAREVKEHPLFKQ 266 (285)
T ss_pred CchHHHHcChhhhc
Confidence 999999999974
No 168
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=7.5e-35 Score=334.87 Aligned_cols=265 Identities=23% Similarity=0.289 Sum_probs=201.8
Q ss_pred CCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||.||++++.. ..+|+|+...... ...... ..+..|+.++..++|+||+++++++.+..
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~----~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM-LKRAET----ACFREERDVLVNGDNQWITTLHYAFQDEN- 74 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH-HHhhHH----HHHHHHHHHHhhCCCCCEeeEEEEEecCC-
Confidence 479999999999999999999854 4567776432110 011111 22478999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++|+|.+++.+. ...+++..++.|+.||+.||.|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~ey~~~g~L~~~l~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~ 137 (332)
T cd05623 75 -------------NLYLVMDYYVGGDLLTLLSKF----EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM 137 (332)
T ss_pred -------------EEEEEEeccCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECC
Confidence 349999999999999999752 236899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~EL 1042 (1141)
+ +.+||+|||++..+..... .......||+.|+|||++.... ....++.++|||||||++|||
T Consensus 138 ~-------~~~kL~DfG~a~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~el 201 (332)
T cd05623 138 N-------GHIRLADFGSCLKLMEDGT---------VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEM 201 (332)
T ss_pred C-------CCEEEeecchheecccCCc---------ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHH
Confidence 7 7899999999865432111 1112346999999999986422 124578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--C
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE--R 1119 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~--R 1119 (1141)
++|+.||...+..+....+..... ..++ ......+.++.+++.+|+..++.+ |
T Consensus 202 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~p------------------------~~~~~~s~~~~~li~~ll~~~~~r~~r 257 (332)
T cd05623 202 LYGETPFYAESLVETYGKIMNHKERFQFP------------------------AQVTDVSEDAKDLIRRLICSREHRLGQ 257 (332)
T ss_pred hcCCCCCCCCCHHHHHHHHhCCCccccCC------------------------CccccCCHHHHHHHHHHccChhhhcCC
Confidence 999999998777666666543221 1110 001145677999999999765554 7
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
+++.++++|+|+..
T Consensus 258 ~~~~~~~~h~~f~~ 271 (332)
T cd05623 258 NGIEDFKQHPFFTG 271 (332)
T ss_pred CCHHHHhCCCCcCC
Confidence 89999999999864
No 169
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=3.1e-34 Score=322.18 Aligned_cols=260 Identities=23% Similarity=0.294 Sum_probs=199.4
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|+..+.||+|+||+||+|.+. +..+|+|+...... ... .....+.+|++++++++|+||+.+++.+...+
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~---~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-- 73 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRI--KKR---KGESMALNEKQILEKVNSQFVVNLAYAYETKD-- 73 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhh--hhh---hHHHHHHHHHHHHHHcCCcCceeEEEEEecCC--
Confidence 3778899999999999999985 55677776533211 111 11122368999999999999999999887654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.. .+...+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus 74 ------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~ 138 (285)
T cd05632 74 ------------ALCLVLTIMNGGDLKFHIYN---MGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDY 138 (285)
T ss_pred ------------EEEEEEEeccCccHHHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCC
Confidence 34999999999999998865 223469999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||++....... ......|+..|+|||++.+ ..++.++|+|||||++|+|++
T Consensus 139 -------~~~kl~Dfg~~~~~~~~~-----------~~~~~~g~~~~~aPE~~~~----~~~~~~~Di~slG~~l~~l~~ 196 (285)
T cd05632 139 -------GHIRISDLGLAVKIPEGE-----------SIRGRVGTVGYMAPEVLNN----QRYTLSPDYWGLGCLIYEMIE 196 (285)
T ss_pred -------CCEEEecCCcceecCCCC-----------cccCCCCCcCccChHHhcC----CCCCcccchHHHHHHHHHHHh
Confidence 789999999986543211 1123468999999999875 567899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC---
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT--- 1121 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS--- 1121 (1141)
|+.||.+.........+......... ......+..+.+|+..||+.||++||+
T Consensus 197 g~~P~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ 252 (285)
T cd05632 197 GQSPFRGRKEKVKREEVDRRVLETEE------------------------VYSAKFSEEAKSICKMLLTKDPKQRLGCQE 252 (285)
T ss_pred CCCCCCCCCHHHHHHHHHHhhhcccc------------------------ccCccCCHHHHHHHHHHccCCHhHcCCCcc
Confidence 99999876554333332111100000 000134556899999999999999999
Q ss_pred --HHHHHHHHHhhcC
Q 001143 1122 --AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 --a~ElL~~L~~~~~ 1134 (1141)
+.++++|.|+...
T Consensus 253 ~~~~~l~~~~~~~~~ 267 (285)
T cd05632 253 EGAGEVKRHPFFRNM 267 (285)
T ss_pred cChHHHHcChhhhcC
Confidence 8999999998754
No 170
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=6.3e-34 Score=319.85 Aligned_cols=259 Identities=22% Similarity=0.359 Sum_probs=198.4
Q ss_pred CceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+|++.+.||+|+||.||+|.+.. ..+++|+. .... .....+. +.+|+.+++.++||||+++++.+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~--~~~~-~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~ 73 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKML--KENA-SSSELRD----LLSEFNLLKQVNHPHVIKLYGACS 73 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEec--CCCC-CHHHHHH----HHHHHHHHhhCCCCCEeeEEEEEe
Confidence 47889999999999999998632 23555543 2211 1222333 478999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-------------------cCCCCCCHHHHHHHHHHHHHH
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-------------------TGEKHVSVKLALFIAQDVAAA 940 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-------------------~~~~~Ls~~~i~~Ia~QIa~g 940 (1141)
.... .++||||+++++|.+++..... .....+++..++.++.|++.|
T Consensus 74 ~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~ 139 (290)
T cd05045 74 QDGP--------------LLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRG 139 (290)
T ss_pred cCCC--------------cEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHH
Confidence 6543 3999999999999999875321 112358899999999999999
Q ss_pred HHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccc
Q 001143 941 LVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAM 1020 (1141)
Q Consensus 941 L~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 1020 (1141)
|.|||+++|+||||||+|||++.+ +.+||+|||++......... .......++..|+|||++.+
T Consensus 140 l~~LH~~~ivH~dikp~nill~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~apE~~~~- 203 (290)
T cd05045 140 MQYLAEMKLVHRDLAARNVLVAEG-------RKMKISDFGLSRDVYEEDSY--------VKRSKGRIPVKWMAIESLFD- 203 (290)
T ss_pred HHHHHHCCeehhhhhhheEEEcCC-------CcEEeccccccccccCccch--------hcccCCCCCccccCHHHHcc-
Confidence 999999999999999999999877 78999999998754321110 00112235678999999865
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhh
Q 001143 1021 HKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE 1099 (1141)
Q Consensus 1021 ~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1141)
..++.++||||||+++|+|++ |..||.+....++...+........+ ..
T Consensus 204 ---~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~ 253 (290)
T cd05045 204 ---HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERP---------------------------EN 253 (290)
T ss_pred ---CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCCCCC---------------------------CC
Confidence 567899999999999999998 99999877766665554433221111 13
Q ss_pred hHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1100 TLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1100 ~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.+..+.+++.+||+.||.+||++.++++.+...
T Consensus 254 ~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~ 286 (290)
T cd05045 254 CSEEMYNLMLTCWKQEPDKRPTFADISKELEKM 286 (290)
T ss_pred CCHHHHHHHHHHccCCcccCCCHHHHHHHHHHH
Confidence 456799999999999999999999999988754
No 171
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=3.3e-34 Score=316.12 Aligned_cols=265 Identities=24% Similarity=0.388 Sum_probs=204.5
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||.|+||+||+|.+. +..+++|+...... . ...+.+ .+|+.+++.++||||+++++.+....
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~-~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~- 72 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC--Q-TSVDEL----RKEVQAMSQCNHPNVVKYYTSFVVGD- 72 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc--c-hHHHHH----HHHHHHHHhcCCCCEEEEEEEEeeCC-
Confidence 47899999999999999999974 45667776543221 1 133333 78999999999999999999887654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.++++.... ...+++..+..++.|++.||.|||++||+||||+|+||++++
T Consensus 73 -------------~~~iv~e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~ 137 (267)
T cd06610 73 -------------ELWLVMPYLSGGSLLDIMKSSYP--RGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGE 137 (267)
T ss_pred -------------EEEEEEeccCCCcHHHHHHHhcc--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcC
Confidence 34999999999999999976321 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||++..+....... ........|+..|+|||++... ..++.++|+|||||++|+|+
T Consensus 138 ~-------~~~~l~df~~~~~~~~~~~~~------~~~~~~~~~~~~y~~Pe~~~~~---~~~~~~~Dv~slG~i~~~l~ 201 (267)
T cd06610 138 D-------GSVKIADFGVSASLADGGDRT------RKVRKTFVGTPCWMAPEVMEQV---HGYDFKADIWSFGITAIELA 201 (267)
T ss_pred C-------CCEEEcccchHHHhccCcccc------ccccccccCChhhcChHHHccc---cCcCcccchHhHhHHHHHHH
Confidence 7 789999999987654432110 0112344689999999998762 35788999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|+.||...+..+....+.....+.+... ......+..+.+++.+||..||++||++.
T Consensus 202 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ 259 (267)
T cd06610 202 TGAAPYSKYPPMKVLMLTLQNDPPSLETG----------------------ADYKKYSKSFRKMISLCLQKDPSKRPTAE 259 (267)
T ss_pred hCCCCccccChhhhHHHHhcCCCCCcCCc----------------------cccccccHHHHHHHHHHcCCChhhCcCHH
Confidence 99999987665554444333222211110 00114567789999999999999999999
Q ss_pred HHHHHHHh
Q 001143 1124 DLYEMFVA 1131 (1141)
Q Consensus 1124 ElL~~L~~ 1131 (1141)
++++|+|+
T Consensus 260 ~ll~~p~~ 267 (267)
T cd06610 260 ELLKHKFF 267 (267)
T ss_pred HHhhCCCC
Confidence 99999986
No 172
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.4e-34 Score=321.57 Aligned_cols=259 Identities=20% Similarity=0.300 Sum_probs=200.5
Q ss_pred CCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
+.+|++.+.||+|+||.||+|.+.+ ..+|+|+...+ . .... ...+.+|+.++.+++||||++++++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~--~-~~~~----~~~~~~e~~~~~~l~h~~iv~~~~~ 76 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDK--A-EGPL----REEFKHEAMMRSRLQHPNIVCLLGV 76 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCC--C-CHHH----HHHHHHHHHHHhcCCCCCcCeEEEE
Confidence 4568899999999999999998742 44666664322 1 1122 2234789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-----------cCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELHS 946 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-----------~~~~~Ls~~~i~~Ia~QIa~gL~yLHs 946 (1141)
+.+... .++++||+++++|.+++..... .....+++..+..++.|++.||+|||+
T Consensus 77 ~~~~~~--------------~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~ 142 (283)
T cd05091 77 VTKEQP--------------LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS 142 (283)
T ss_pred EcCCCc--------------eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 876543 4999999999999999853110 112358889999999999999999999
Q ss_pred CCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC
Q 001143 947 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1026 (1141)
Q Consensus 947 ~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1026 (1141)
+||+||||||+||+++.+ +.+||+|||+++........ .......+++.|+|||++.+ ..+
T Consensus 143 ~gi~H~dlkp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~ 203 (283)
T cd05091 143 HHVVHKDLATRNVLVFDK-------LNVKISDLGLFREVYAADYY--------KLMGNSLLPIRWMSPEAIMY----GKF 203 (283)
T ss_pred cCccccccchhheEecCC-------CceEecccccccccccchhe--------eeccCccCCccccCHHHHhc----CCC
Confidence 999999999999999877 78999999998765332111 01122346788999999875 457
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHH
Q 001143 1027 GLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1105 (1141)
Q Consensus 1027 s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1105 (1141)
+.++|||||||++|||++ |..||.+....+....+........+ ..++..+.
T Consensus 204 ~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~ 256 (283)
T cd05091 204 SIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCP---------------------------DDCPAWVY 256 (283)
T ss_pred CcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHH
Confidence 899999999999999998 88999887777777666554432211 14566799
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHH
Q 001143 1106 DVFRRCTEENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1106 dLI~~cL~~DP~~RPSa~ElL~~L~ 1130 (1141)
+++..||+.+|.+||++.+|+..+.
T Consensus 257 ~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 257 TLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred HHHHHHhCCCcccCCCHHHHHHHhh
Confidence 9999999999999999999998763
No 173
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.1e-34 Score=332.84 Aligned_cols=249 Identities=22% Similarity=0.356 Sum_probs=191.0
Q ss_pred eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
+.||+|+||.||+|.+. +..+|+|+....... .....+ .+.+|+.++.++ +||||+++++++....
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~----~~~~e~~~~~~~~~~~~i~~~~~~~~~~~------ 69 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVH-DDEDID----WVQTEKHVFEQASSNPFLVGLHSCFQTTS------ 69 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-hhhHHH----HHHHHHHHHHhhcCCCCEeeEEEEEEeCC------
Confidence 47999999999999974 456777775432111 112222 347899999888 5999999999987654
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
+.++||||+++++|..++.. ...+++..++.|+.||+.||+|||++||+||||||+|||++.+
T Consensus 70 --------~~~lv~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~---- 132 (327)
T cd05617 70 --------RLFLVIEYVNGGDLMFHMQR-----QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDAD---- 132 (327)
T ss_pred --------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCC----
Confidence 35999999999999998865 3469999999999999999999999999999999999999887
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|+|++|..|
T Consensus 133 ---~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~ell~g~~p 195 (327)
T cd05617 133 ---GHIKLTDYGMCKEGLGPGD----------TTSTFCGTPNYIAPEILRG----EEYGFSVDWWALGVLMFEMMAGRSP 195 (327)
T ss_pred ---CCEEEeccccceeccCCCC----------ceecccCCcccCCHHHHCC----CCCCchheeehhHHHHHHHHhCCCC
Confidence 7899999999864221110 1123468999999999876 5678999999999999999999999
Q ss_pred CCCCC------HHH-HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1049 YMGLS------ELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1049 f~~~~------~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|.... ..+ ....+.. ....++ ...+..+.+++.+||+.||.+|++
T Consensus 196 f~~~~~~~~~~~~~~~~~~~~~-~~~~~p---------------------------~~~~~~~~~li~~~L~~dP~~R~~ 247 (327)
T cd05617 196 FDIITDNPDMNTEDYLFQVILE-KPIRIP---------------------------RFLSVKASHVLKGFLNKDPKERLG 247 (327)
T ss_pred CCccCCCcccccHHHHHHHHHh-CCCCCC---------------------------CCCCHHHHHHHHHHhccCHHHcCC
Confidence 95321 111 2222211 111111 134566899999999999999997
Q ss_pred ------HHHHHHHHHhhc
Q 001143 1122 ------AGDLYEMFVART 1133 (1141)
Q Consensus 1122 ------a~ElL~~L~~~~ 1133 (1141)
+.++++|+|+..
T Consensus 248 ~~~~~~~~~i~~h~~f~~ 265 (327)
T cd05617 248 CQPQTGFSDIKSHTFFRS 265 (327)
T ss_pred CCCCCCHHHHHcCCCCCC
Confidence 579999999864
No 174
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=9.9e-34 Score=316.22 Aligned_cols=258 Identities=21% Similarity=0.305 Sum_probs=198.7
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--Cc----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SA----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~----~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
...+|++.++||+|+||+||+|++. +. .||+|+.+.. ......+. +.+|+.++..++||||++++++
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~----~~~e~~~l~~~~~~~i~~~~~~ 77 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN---TSPKANKE----ILDEAYVMAGVGSPYVCRLLGI 77 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC---CCHHHHHH----HHHHHHHHHhcCCCCCceEEEE
Confidence 3567899999999999999999873 22 2566664322 12222233 4789999999999999999998
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+.... .+++|||+++|+|.++++. ....+++..+..++.||+.||+|||+++|+||||||+
T Consensus 78 ~~~~~---------------~~l~~~~~~~g~l~~~l~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~ 138 (279)
T cd05109 78 CLTST---------------VQLVTQLMPYGCLLDYVRE----NKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAAR 138 (279)
T ss_pred EcCCC---------------cEEEEEcCCCCCHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccc
Confidence 86422 3799999999999999875 1246899999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||++.+ +.+||+|||+++......... ......+++.|+|||.+.+ ..++.++|||||||
T Consensus 139 Nil~~~~-------~~~kL~dfG~~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~ 199 (279)
T cd05109 139 NVLVKSP-------NHVKITDFGLARLLDIDETEY--------HADGGKVPIKWMALESILH----RRFTHQSDVWSYGV 199 (279)
T ss_pred eEEEcCC-------CcEEECCCCceeeccccccee--------ecCCCccchhhCCHHHhcc----CCCCchhHHHHHHH
Confidence 9999876 679999999997654321110 0111235678999999875 46789999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|||++ |..||...........+..+..+..+ ...+..+.+++.+||..||
T Consensus 200 ~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~dp 252 (279)
T cd05109 200 TVWELMTFGAKPYDGIPAREIPDLLEKGERLPQP---------------------------PICTIDVYMIMVKCWMIDS 252 (279)
T ss_pred HHHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCC---------------------------ccCCHHHHHHHHHHcCCCh
Confidence 9999998 99999876666555555443322211 1345678999999999999
Q ss_pred CCCCCHHHHHHHHHhhc
Q 001143 1117 TERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~ 1133 (1141)
++||++.++++.+....
T Consensus 253 ~~Rp~~~~l~~~l~~~~ 269 (279)
T cd05109 253 ECRPRFRELVDEFSRMA 269 (279)
T ss_pred hhCcCHHHHHHHHHHhh
Confidence 99999999998775543
No 175
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4e-34 Score=315.35 Aligned_cols=251 Identities=24% Similarity=0.376 Sum_probs=197.0
Q ss_pred CCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..+|++.+.||+|+||.||+|.+.. ..+++|+.. ..... ...+ .+|+.++++++||||+++++++.....
T Consensus 3 ~~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~--~~~~~---~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~~ 73 (256)
T cd05059 3 PSELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIR--EGAMS---EDDF----IEEAKVMMKLSHPNLVQLYGVCTKQRP 73 (256)
T ss_pred hHHcchhhhhccCCCceEEEeEecCCccEEEEEec--cCCCC---HHHH----HHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 4568999999999999999998854 467787643 21111 1223 689999999999999999999876543
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 74 --------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~ 135 (256)
T cd05059 74 --------------IFIVTEYMANGCLLNYLRER----KGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGE 135 (256)
T ss_pred --------------eEEEEecCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECC
Confidence 49999999999999998751 236899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.++........ ......++..|+|||.+.+ ..++.++||||||+++|+|+
T Consensus 136 ~-------~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~Pe~~~~----~~~~~~~Di~slG~il~~l~ 195 (256)
T cd05059 136 D-------NVVKVSDFGLARYVLDDQYT---------SSQGTKFPVKWAPPEVFDY----SRFSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred C-------CcEEECCcccceeccccccc---------ccCCCCCCccccCHHHhcc----CCCCchhhHHHHHHHHHHHh
Confidence 7 78999999998754321110 0111124567999999876 46788999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |+.||......+....+.....+..+ ...+..+.+++.+||..+|++|||+
T Consensus 196 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~cl~~~p~~Rpt~ 248 (256)
T cd05059 196 SEGKMPYERFSNSEVVESVSAGYRLYRP---------------------------KLAPTEVYTIMYSCWHEKPEDRPAF 248 (256)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHhcCChhhCcCH
Confidence 9 89999876666665555433221111 1345679999999999999999999
Q ss_pred HHHHHHH
Q 001143 1123 GDLYEMF 1129 (1141)
Q Consensus 1123 ~ElL~~L 1129 (1141)
.|+++.+
T Consensus 249 ~~~l~~l 255 (256)
T cd05059 249 KKLLSQL 255 (256)
T ss_pred HHHHHHh
Confidence 9999875
No 176
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=8.4e-34 Score=312.21 Aligned_cols=249 Identities=25% Similarity=0.398 Sum_probs=201.7
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
..+|++.+.||.|+||.||+|...+..+++|...... ...+. +.+|+.++++++|+||+++++++.+..
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~-----~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 73 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDS-----TAAQA----FLAEASVMTTLRHPNLVQLLGVVLQGN-- 73 (256)
T ss_pred hhhccceeeeecCCCceEEEEEecCcEEEEEEeccch-----hHHHH----HHHHHHHHHhcCCcceeeeEEEEcCCC--
Confidence 5678999999999999999999999999999864331 12233 378999999999999999999987544
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.++++. .....+++..+..++.|++.||.|||++||+||||||+||+++.+
T Consensus 74 ------------~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~ 138 (256)
T cd05039 74 ------------PLYIVTEYMAKGSLVDYLRS---RGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSED 138 (256)
T ss_pred ------------CeEEEEEecCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCC
Confidence 34999999999999999976 222368999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+....... .....+..|+|||++.. ..++.++||||||+++|+|++
T Consensus 139 -------~~~~l~d~g~~~~~~~~~-------------~~~~~~~~~~ape~~~~----~~~~~~~Di~slG~il~~l~~ 194 (256)
T cd05039 139 -------LVAKVSDFGLAKEASQGQ-------------DSGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEIYS 194 (256)
T ss_pred -------CCEEEccccccccccccc-------------ccCCCcccccCchhhcC----CcCCcHHHHHHHHHHHHHHHh
Confidence 789999999987653211 01224567999999865 457789999999999999997
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 -Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|..||......++...+.....+..+ ...++.+.+++.+||..+|.+|||+.
T Consensus 195 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 247 (256)
T cd05039 195 FGRVPYPRIPLKDVVPHVEKGYRMEAP---------------------------EGCPPEVYKVMKDCWELDPAKRPTFK 247 (256)
T ss_pred cCCCCCCCCCHHHHHHHHhcCCCCCCc---------------------------cCCCHHHHHHHHHHhccChhhCcCHH
Confidence 99999877666665555433221111 13456799999999999999999999
Q ss_pred HHHHHHH
Q 001143 1124 DLYEMFV 1130 (1141)
Q Consensus 1124 ElL~~L~ 1130 (1141)
++++.+.
T Consensus 248 ~l~~~l~ 254 (256)
T cd05039 248 QLREQLA 254 (256)
T ss_pred HHHHHHh
Confidence 9999875
No 177
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.9e-34 Score=319.42 Aligned_cols=259 Identities=27% Similarity=0.383 Sum_probs=196.5
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+|++.+.||+|+||.||+|++. +..+++|+..... ...... +.+|+.++++++||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~----~~~~~~----~~~e~~~l~~~~h~~ii~~~~~~~~~ 78 (267)
T cd06646 7 PQHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP----GDDFSL----IQQEIFMVKECKHCNIVAYFGSYLSR 78 (267)
T ss_pred chhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc----cchHHH----HHHHHHHHHhcCCCCeeeeeEEEEeC
Confidence 3457999999999999999999974 5567777754321 112222 36899999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+++++|.++++. ...+++..+..++.|++.||+|||++||+||||||+||++
T Consensus 79 ~--------------~~~iv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill 139 (267)
T cd06646 79 E--------------KLWICMEYCGGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILL 139 (267)
T ss_pred C--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE
Confidence 4 35999999999999999875 2468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.++|+|||++........ ......|++.|+|||.+.... ...++.++|||||||++|+
T Consensus 140 ~~~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~-~~~~~~~~Dvws~G~il~e 201 (267)
T cd06646 140 TDN-------GDVKLADFGVAAKITATIA----------KRKSFIGTPYWMAPEVAAVEK-NGGYNQLCDIWAVGITAIE 201 (267)
T ss_pred CCC-------CCEEECcCccceeeccccc----------ccCccccCccccCHhHccccc-CCCCcchhhHHHHHHHHHH
Confidence 877 7899999999976532110 112345889999999975321 2446789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|++|+.||......+....+....... + ........+..+.+++.+||..||++|||
T Consensus 202 l~~g~~p~~~~~~~~~~~~~~~~~~~~-~----------------------~~~~~~~~~~~~~~li~~~l~~~P~~Rp~ 258 (267)
T cd06646 202 LAELQPPMFDLHPMRALFLMSKSNFQP-P----------------------KLKDKTKWSSTFHNFVKISLTKNPKKRPT 258 (267)
T ss_pred HHhCCCCccccchhhhheeeecCCCCC-C----------------------CCccccccCHHHHHHHHHHhhCChhhCcC
Confidence 999999996544322221111110000 0 00000134567999999999999999999
Q ss_pred HHHHHHHHH
Q 001143 1122 AGDLYEMFV 1130 (1141)
Q Consensus 1122 a~ElL~~L~ 1130 (1141)
++++++|+|
T Consensus 259 ~~~il~~l~ 267 (267)
T cd06646 259 AERLLTHLF 267 (267)
T ss_pred HHHHhcCCC
Confidence 999999876
No 178
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=5.2e-34 Score=324.15 Aligned_cols=280 Identities=23% Similarity=0.300 Sum_probs=199.3
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
++|++.++||+|+||.||+|.+..+...++++.+.... .... ..++.+|++++.+++||||+++++++..++
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 72 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAI----RNQIIRELKVLHECNSPYIVGFYGAFYSDG--- 72 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHH----HHHHHHHHHHHHhCCCCCCCeEEEEEeeCC---
Confidence 36899999999999999999986444333333333211 1222 223478999999999999999999998655
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCeeeecc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.++++. ...+++..+..++.||+.||.|||+ .+++||||||+|||++.+
T Consensus 73 -----------~~~lv~ey~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~ 136 (308)
T cd06615 73 -----------EISICMEHMDGGSLDQVLKK-----AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSR 136 (308)
T ss_pred -----------EEEEEeeccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecC
Confidence 34999999999999999976 2468999999999999999999997 599999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||++...... ......++..|+|||.+.+ ..++.++|||||||++|+|++
T Consensus 137 -------~~~~l~dfg~~~~~~~~------------~~~~~~~~~~~~aPE~~~~----~~~~~~~DiwslG~~l~~l~~ 193 (308)
T cd06615 137 -------GEIKLCDFGVSGQLIDS------------MANSFVGTRSYMSPERLQG----THYTVQSDIWSLGLSLVEMAI 193 (308)
T ss_pred -------CcEEEccCCCccccccc------------ccccCCCCcCccChhHhcC----CCCCccchHHHHHHHHHHHHh
Confidence 78999999998654221 1123468899999999865 457889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHh-hhccCccc---------cccccCCCCCCch-hhhhhHHHHHHHHHHhcc
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELE-ALGSCHEH---------EVAQSGSGFEKPE-AELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~-~~~~~~~~---------~~~~~~~~~~~~~-~~~~~~~~L~dLI~~cL~ 1113 (1141)
|+.||...........+..... ....... ........ ...+....-..+. .....+.++.+++.+||.
T Consensus 194 g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 272 (308)
T cd06615 194 GRYPIPPPDAKELEAMFGRPVS-EGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLK 272 (308)
T ss_pred CCCCCCCcchhhHHHhhcCccc-cccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHcc
Confidence 9999976554433333221110 0000000 00000000 0000000000000 001256679999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhc
Q 001143 1114 ENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.||++|||+.++++|+|+..
T Consensus 273 ~~P~~Rpt~~~ll~~~~~~~ 292 (308)
T cd06615 273 KNPKERADLKELTKHPFIKR 292 (308)
T ss_pred CChhhCcCHHHHhcChhhhh
Confidence 99999999999999999975
No 179
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1e-34 Score=333.81 Aligned_cols=265 Identities=22% Similarity=0.288 Sum_probs=201.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||++++. +..+|+|+...... ...... ..+..|+.++..++|+||+++++++.+.+
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~----~~~~~e~~~l~~~~~~~i~~l~~~~~~~~- 74 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEM-LKRAET----ACFREERNVLVNGDCQWITTLHYAFQDEN- 74 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHH-HhhHHH----HHHHHHHHHHHhCCCCCEeeEEEEEEcCC-
Confidence 47999999999999999999985 45577776532110 011111 23478899999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..|+||||++||+|.+++... ...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 75 -------------~~~lv~Ey~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~ 137 (331)
T cd05624 75 -------------YLYLVMDYYVGGDLLTLLSKF----EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM 137 (331)
T ss_pred -------------EEEEEEeCCCCCcHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcC
Confidence 349999999999999999752 236899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC-CCCCchhhHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP-NLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~-~~~s~ksDVWSLGviL~EL 1042 (1141)
+ +.+||+|||++......... ......||+.|+|||++.+.... ..++.++|||||||++|+|
T Consensus 138 ~-------~~~kl~DfG~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~el 201 (331)
T cd05624 138 N-------GHIRLADFGSCLKMNQDGTV---------QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEM 201 (331)
T ss_pred C-------CCEEEEeccceeeccCCCce---------eeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhh
Confidence 7 78999999998755332110 11234699999999998753211 3467899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--C
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE--R 1119 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~--R 1119 (1141)
++|+.||...+..+....+.... ...++. .....+.++.+++.+||..++.+ |
T Consensus 202 l~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~------------------------~~~~~~~~~~~li~~ll~~~~~~~~~ 257 (331)
T cd05624 202 LYGETPFYAESLVETYGKIMNHEERFQFPS------------------------HITDVSEEAKDLIQRLICSRERRLGQ 257 (331)
T ss_pred hhCCCCccCCCHHHHHHHHHcCCCcccCCC------------------------ccccCCHHHHHHHHHHccCchhhcCC
Confidence 99999998877666655553321 111110 00134567999999999876655 5
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
++++++++|+|+..
T Consensus 258 ~~~~~~~~h~~f~~ 271 (331)
T cd05624 258 NGIEDFKKHAFFEG 271 (331)
T ss_pred CCHHHHhcCCCcCC
Confidence 79999999999864
No 180
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=4.3e-34 Score=321.56 Aligned_cols=263 Identities=29% Similarity=0.449 Sum_probs=202.3
Q ss_pred CCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+.|++.++||+|+||.||+|.+.. ..+++|+.... .....+.+ .+|+.++++++||||+++++.+..+.
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~----~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~- 82 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELEDY----MVEIEILATCNHPYIVKLLGAFYWDG- 82 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC----CHHHHHHH----HHHHHHHHhCCCCcEeeeEEEEEeCC-
Confidence 569999999999999999999854 55666654321 22333334 78999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|..++.+. ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 83 -------------~~~lv~e~~~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~ 145 (292)
T cd06644 83 -------------KLWIMIEFCPGGAVDAIMLEL----DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTL 145 (292)
T ss_pred -------------eEEEEEecCCCCcHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcC
Confidence 349999999999998887641 236899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~EL 1042 (1141)
+ +.++|+|||.+........ ......+++.|+|||++.+.. ....++.++|||||||++|+|
T Consensus 146 ~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el 208 (292)
T cd06644 146 D-------GDIKLADFGVSAKNVKTLQ----------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208 (292)
T ss_pred C-------CCEEEccCccceecccccc----------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHH
Confidence 6 7899999998865322110 112345788999999985322 234578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|..||...+.......+.....+.... ....+.++.+++.+||..||++||++
T Consensus 209 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~ 263 (292)
T cd06644 209 AQIEPPHHELNPMRVLLKIAKSEPPTLSQ-------------------------PSKWSMEFRDFLKTALDKHPETRPSA 263 (292)
T ss_pred hcCCCCCccccHHHHHHHHhcCCCccCCC-------------------------CcccCHHHHHHHHHHhcCCcccCcCH
Confidence 99999998766554444433222211110 01345568999999999999999999
Q ss_pred HHHHHHHHhhcCCC
Q 001143 1123 GDLYEMFVARTSSS 1136 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s~ 1136 (1141)
.++++|+|+..-.+
T Consensus 264 ~~il~~~~~~~~~~ 277 (292)
T cd06644 264 AQLLEHPFVSSVTS 277 (292)
T ss_pred HHHhcCcccccccc
Confidence 99999999975433
No 181
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=5e-34 Score=320.66 Aligned_cols=290 Identities=18% Similarity=0.217 Sum_probs=202.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~ 882 (1141)
++|++.+.||+|+||.||+|.+. +..+++|+...... ...... .+.+|+.+++++. ||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~--~~~~~~----~~~~E~~~l~~l~~~~~i~~~~~~~~~~~ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMD--EEGIPP----TALREISLLQMLSESIYIVRLLDVEHVEE 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhcc--ccCCch----HHHHHHHHHHHccCCCCccceeeeEeecC
Confidence 46899999999999999999984 56677776544321 111112 2368999999995 799999999987643
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. .....|+||||++ ++|.+++..........+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 75 ~~---------~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~ 144 (295)
T cd07837 75 KN---------GKPSLYLVFEYLD-SDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVD 144 (295)
T ss_pred CC---------CCceEEEEeeccC-cCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEe
Confidence 21 1224699999998 5899988764332234689999999999999999999999999999999999998
Q ss_pred c-ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 963 L-ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 963 ~-~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
. + +.+||+|||.+..+..... ......+++.|+|||++.+ ...++.++||||||+++|+
T Consensus 145 ~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~~l~~ 204 (295)
T cd07837 145 KQK-------GLLKIADLGLGRAFSIPVK----------SYTHEIVTLWYRAPEVLLG---STHYSTPVDIWSVGCIFAE 204 (295)
T ss_pred cCC-------CeEEEeecccceecCCCcc----------ccCCcccccCCCChHHhhC---CCCCCchHHHHHHHHHHHH
Confidence 7 4 7899999999875432111 1112246888999999865 2356899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++|..||.+.+..+....+.. ...+... .+...........................+..+.++|.+||..||.+||
T Consensus 205 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~ 283 (295)
T cd07837 205 MSRKQPLFPGDSELQQLLHIFKLLGTPTEQ-VWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRI 283 (295)
T ss_pred HHcCCCCCCCCCHHHHHHHHHHHhCCCChh-hCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcC
Confidence 9999999987665554433321 1111100 0000000000000000000000011124567799999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001143 1121 TAGDLYEMFVAR 1132 (1141)
Q Consensus 1121 Sa~ElL~~L~~~ 1132 (1141)
++.|++.|+|+.
T Consensus 284 ~~~eil~~~~~~ 295 (295)
T cd07837 284 SAKAALTHPYFD 295 (295)
T ss_pred CHHHHhcCCCcC
Confidence 999999999973
No 182
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=8.3e-34 Score=316.81 Aligned_cols=280 Identities=20% Similarity=0.263 Sum_probs=203.3
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|++|.||+|.+. +..+++|+...... .....+. +.+|+.++++++||||+++++++....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~----~~~e~~~l~~~~~~~i~~~~~~~~~~~-- 72 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRL--EGGIPNQ----ALREIKALQACQHPYVVKLLDVFPHGS-- 72 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccc--cchhhHH----HHHHHHHHHhCCCCCCcceeeEEecCC--
Confidence 5899999999999999999974 56777777554321 1122223 478999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+ +++|.+++... ...+++..++.++.||+.||+|||++||+|+||||+||+++.+
T Consensus 73 ------------~~~~v~e~~-~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~ 135 (286)
T cd07832 73 ------------GFVLVMEYM-PSDLSEVLRDE----ERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISAD 135 (286)
T ss_pred ------------eeEEEeccc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCC
Confidence 349999999 99999998752 2469999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+........ .......++..|+|||++.+ ...++.++||||+||++|+|++
T Consensus 136 -------~~~~l~dfg~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~~l~~l~t 196 (286)
T cd07832 136 -------GVLKIADFGLARLFSEEEP---------RLYSHQVATRWYRAPELLYG---ARKYDPGVDLWAVGCIFAELLN 196 (286)
T ss_pred -------CcEEEeeeeecccccCCCC---------CccccccCcccccCceeeec---cccCCchhHHHHHHHHHHHHHc
Confidence 7899999999876543211 01123458899999999865 2356789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccc-cc-cccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1045 LQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEH-EV-AQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|++||.+.........+.. ...+.. ..++........ .. ................+..+.+++.+||..||.+|||
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~ 275 (286)
T cd07832 197 GSPLFPGENDIEQLAIVFRTLGTPNE-ETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLS 275 (286)
T ss_pred CCcCcCCCCHHHHHHHHHHHcCCCCh-HHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCC
Confidence 9888877665554444322 222211 111110000000 00 0000000000111244578999999999999999999
Q ss_pred HHHHHHHHHh
Q 001143 1122 AGDLYEMFVA 1131 (1141)
Q Consensus 1122 a~ElL~~L~~ 1131 (1141)
++++++|+|+
T Consensus 276 ~~~~l~h~~~ 285 (286)
T cd07832 276 AAEALRHPYF 285 (286)
T ss_pred HHHHhhCcCc
Confidence 9999999997
No 183
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=8.7e-34 Score=317.39 Aligned_cols=256 Identities=21% Similarity=0.288 Sum_probs=196.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--Ccc----EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SAD----AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~----vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
..+|++.+.||+|+||+||+|.+. +.. +++|.. ... ....... .+..|+.+++++.||||+++++++
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~--~~~-~~~~~~~----~~~~~~~~l~~l~h~~iv~~~~~~ 78 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTI--QDR-SGRQTFQ----EITDHMLAMGSLDHAYIVRLLGIC 78 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeec--ccc-cchHHHH----HHHHHHHHHhcCCCCCcceEEEEE
Confidence 457899999999999999999983 333 333332 211 1111222 336888899999999999999987
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
... ..++||||+++|+|.+++... ...+++..+..|+.||+.||.|||++|++||||||+|
T Consensus 79 ~~~---------------~~~~i~e~~~~gsL~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~n 139 (279)
T cd05111 79 PGA---------------SLQLVTQLSPLGSLLDHVRQH----RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARN 139 (279)
T ss_pred CCC---------------ccEEEEEeCCCCcHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcce
Confidence 432 237999999999999999751 2468999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
|+++.+ +.+||+|||.++........ .......++..|+|||++.+ ..++.++|||||||+
T Consensus 140 ili~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~~pE~~~~----~~~~~~~Dv~slG~i 200 (279)
T cd05111 140 ILLKSD-------SIVQIADFGVADLLYPDDKK--------YFYSEHKTPIKWMALESILF----GRYTHQSDVWSYGVT 200 (279)
T ss_pred EEEcCC-------CcEEEcCCccceeccCCCcc--------cccCCCCCcccccCHHHhcc----CCcCchhhHHHHHHH
Confidence 999877 78999999999764322111 01122346778999999875 467899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|||++ |+.||.+.......+.+..+..+..+. .++..+.+++.+||..||.
T Consensus 201 l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~c~~~~p~ 253 (279)
T cd05111 201 VWEMMSYGAEPYAGMRPHEVPDLLEKGERLAQPQ---------------------------ICTIDVYMVMVKCWMIDEN 253 (279)
T ss_pred HHHHHcCCCCCCCCCCHHHHHHHHHCCCcCCCCC---------------------------CCCHHHHHHHHHHcCCCcc
Confidence 999998 999998776665555554443322111 2334578899999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001143 1118 ERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~ 1132 (1141)
+|||+.|+++.+...
T Consensus 254 ~Rps~~el~~~l~~~ 268 (279)
T cd05111 254 VRPTFKELANEFTRM 268 (279)
T ss_pred cCcCHHHHHHHHHHH
Confidence 999999999987664
No 184
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=6.6e-34 Score=319.68 Aligned_cols=261 Identities=24% Similarity=0.373 Sum_probs=201.8
Q ss_pred CCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg 876 (1141)
..+|++.+.||+|+||.||+|.+.+ ..+++|+.... ........ +.+|+.+++++ +||||+++++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~---~~~~~~~~----~~~E~~~l~~l~~h~~i~~~~~ 83 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDD---ATEKDLSD----LVSEMEMMKMIGKHKNIINLLG 83 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCC---CCHHHHHH----HHHHHHHHHhhcCCCCeeeEEE
Confidence 4568999999999999999998743 34566654321 11222233 37899999999 7999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-----------cCCCCCCHHHHHHHHHHHHHHHHHHH
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELH 945 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-----------~~~~~Ls~~~i~~Ia~QIa~gL~yLH 945 (1141)
++..... .++||||+++++|.++++.... .....+++..++.++.||+.||+|||
T Consensus 84 ~~~~~~~--------------~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH 149 (293)
T cd05053 84 VCTQEGP--------------LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA 149 (293)
T ss_pred EEcCCCC--------------eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH
Confidence 9876543 4999999999999999975321 22346899999999999999999999
Q ss_pred HCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001143 946 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1025 (1141)
Q Consensus 946 s~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1025 (1141)
+++|+||||||+||+++.+ +.+||+|||.++.+....... ......++..|+|||++.+ ..
T Consensus 150 ~~~ivH~dlkp~Nil~~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~ 210 (293)
T cd05053 150 SKKCIHRDLAARNVLVTED-------HVMKIADFGLARDIHHIDYYR--------KTTNGRLPVKWMAPEALFD----RV 210 (293)
T ss_pred HCCccccccceeeEEEcCC-------CeEEeCcccccccccccccee--------ccCCCCCCccccCHHHhcc----CC
Confidence 9999999999999999887 789999999997654321110 0111234677999999865 56
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHH
Q 001143 1026 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1104 (1141)
Q Consensus 1026 ~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1104 (1141)
++.++|||||||++|||++ |..||.+....+....+..+..+..+ ...+..+
T Consensus 211 ~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~ 263 (293)
T cd05053 211 YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGYRMEKP---------------------------QNCTQEL 263 (293)
T ss_pred cCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHH
Confidence 7899999999999999998 99999887766666655443322111 1345678
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1105 VDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1105 ~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.+|+.+||..||.+|||+.++++++...
T Consensus 264 ~~li~~~l~~~p~~Rps~~eil~~l~~~ 291 (293)
T cd05053 264 YHLMRDCWHEVPSQRPTFKQLVEDLDRM 291 (293)
T ss_pred HHHHHHHcccCcccCcCHHHHHHHHHHh
Confidence 9999999999999999999999988654
No 185
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.1e-34 Score=318.49 Aligned_cols=268 Identities=26% Similarity=0.380 Sum_probs=200.3
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 879 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~ 879 (1141)
...++|++.+.||+|+||.||+|.+. +..+++|+.... ...... +.+|+.+++++ +||||+++++++.
T Consensus 15 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~-----~~~~~~----~~~e~~~l~~l~~h~~i~~~~~~~~ 85 (286)
T cd06638 15 DPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPI-----HDIDEE----IEAEYNILKALSDHPNVVKFYGMYY 85 (286)
T ss_pred CcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccc-----cchHHH----HHHHHHHHHHHhcCCCeeeeeeeee
Confidence 45678999999999999999999874 566777764311 111122 36899999999 6999999999876
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.... ......++||||+++++|.+++...... ...+++..+..++.|++.||.|||+++|+||||||+||
T Consensus 86 ~~~~---------~~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~ni 155 (286)
T cd06638 86 KKDV---------KNGDQLWLVLELCNGGSVTDLVKGFLKR-GERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNI 155 (286)
T ss_pred eccc---------CCCCeEEEEEeecCCCCHHHHHHHhhcc-CccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhE
Confidence 4221 0123569999999999999998753222 34689999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGvi 1038 (1141)
+++.+ +.++|+|||++..+..... ......|++.|+|||++.... ....++.++|||||||+
T Consensus 156 li~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi 218 (286)
T cd06638 156 LLTTE-------GGVKLVDFGVSAQLTSTRL----------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGIT 218 (286)
T ss_pred EECCC-------CCEEEccCCceeecccCCC----------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHH
Confidence 99887 7799999999876532110 112345899999999985321 12457889999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|+|++|+.||...........+.....+... .+ ...+..+.+++.+||+.||++
T Consensus 219 ~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~---~~~~~~~~~li~~~l~~~p~~ 273 (286)
T cd06638 219 AIELGDGDPPLADLHPMRALFKIPRNPPPTLH----------------------QP---ELWSNEFNDFIRKCLTKDYEK 273 (286)
T ss_pred HHHHhcCCCCCCCCchhHHHhhccccCCCccc----------------------CC---CCcCHHHHHHHHHHccCCccc
Confidence 99999999999765543332222111111100 00 023456899999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001143 1119 RPTAGDLYEMFVA 1131 (1141)
Q Consensus 1119 RPSa~ElL~~L~~ 1131 (1141)
|||+.|+++|+|+
T Consensus 274 Rps~~ell~~~~~ 286 (286)
T cd06638 274 RPTVSDLLQHVFI 286 (286)
T ss_pred CCCHHHHhhcccC
Confidence 9999999999985
No 186
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=8.4e-34 Score=315.59 Aligned_cols=259 Identities=22% Similarity=0.357 Sum_probs=200.9
Q ss_pred CCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
.++|++.+.||+|+||.||+|.+.. ..+++|+.. ... ....... +.+|+.+++.++||||++++++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~--~~~-~~~~~~~----~~~e~~~l~~~~~~~i~~~~~~ 77 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVN--ENA-SMRERIE----FLNEASVMKEFNCHHVVRLLGV 77 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecC--Ccc-CHHHHHH----HHHHHHHHHhCCCCceeEEEEE
Confidence 4578999999999999999998743 446777632 211 1222223 3789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----GEKHVSVKLALFIAQDVAAALVELHSKHIMHR 952 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHr 952 (1141)
+..... .++||||+++++|.+++...... ....+++..+..++.||+.||.|||+++|+||
T Consensus 78 ~~~~~~--------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 143 (277)
T cd05032 78 VSTGQP--------------TLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHR 143 (277)
T ss_pred EcCCCC--------------cEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 876543 39999999999999999753221 12347889999999999999999999999999
Q ss_pred CCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001143 953 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1032 (1141)
Q Consensus 953 DLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1032 (1141)
||||+||+++.+ +.+||+|||.++.+...... .......++..|+|||.+.+ ..++.++||
T Consensus 144 di~p~nill~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di 204 (277)
T cd05032 144 DLAARNCMVAED-------LTVKIGDFGMTRDIYETDYY--------RKGGKGLLPVRWMAPESLKD----GVFTTKSDV 204 (277)
T ss_pred ccChheEEEcCC-------CCEEECCcccchhhccCccc--------ccCCCCCccccccCHHHHhc----CCCCcccch
Confidence 999999999987 78999999998754332110 01122346788999999865 457899999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001143 1033 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1111 (1141)
Q Consensus 1033 WSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~c 1111 (1141)
|||||++|||++ |..||.+.+..+....+.....+..+. ..+..+.+++.+|
T Consensus 205 ~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~ 257 (277)
T cd05032 205 WSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGGHLDLPE---------------------------NCPDKLLELMRMC 257 (277)
T ss_pred HHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHH
Confidence 999999999998 999998777666666554333222111 3456799999999
Q ss_pred cccCCCCCCCHHHHHHHHH
Q 001143 1112 TEENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1112 L~~DP~~RPSa~ElL~~L~ 1130 (1141)
|+.+|++|||+.++++.+.
T Consensus 258 l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 258 WQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred cCCChhhCCCHHHHHHHhc
Confidence 9999999999999998763
No 187
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=8.6e-34 Score=313.32 Aligned_cols=253 Identities=23% Similarity=0.383 Sum_probs=198.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..+|++.+.||+|++|.||+|.+. +..+++|..+ .... ..+.+ .+|+.++++++||||+++++++.....
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~--~~~~---~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~ 75 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLK--PGTM---DPKDF----LAEAQIMKKLRHPKLIQLYAVCTLEEP 75 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeC--CCcc---cHHHH----HHHHHHHHHCCCCCccceeEEEecCCC
Confidence 356899999999999999999874 3456666543 2111 12233 789999999999999999999876543
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++++|.+++... ....+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 76 --------------~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~ 138 (261)
T cd05068 76 --------------IYIVTELMKYGSLLEYLQGG---AGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGE 138 (261)
T ss_pred --------------eeeeeecccCCcHHHHHhcc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcC
Confidence 49999999999999999762 2346899999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||++......... .......+..|+|||++.+ ..++.++||||||+++|+|+
T Consensus 139 ~-------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~el~ 198 (261)
T cd05068 139 N-------NICKVADFGLARVIKEDIYE---------AREGAKFPIKWTAPEAALY----NRFSIKSDVWSFGILLTEIV 198 (261)
T ss_pred C-------CCEEECCcceEEEccCCccc---------ccCCCcCceeccCcccccc----CCCCchhhHHHHHHHHHHHH
Confidence 7 78999999999765421110 0011123457999999875 56789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |+.||.+....+....+........+ ...+..+.+++.+||+.+|.+||++
T Consensus 199 t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~P~~Rp~~ 251 (261)
T cd05068 199 TYGRMPYPGMTNAEVLQQVDQGYRMPCP---------------------------PGCPKELYDIMLDCWKEDPDDRPTF 251 (261)
T ss_pred hcCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CcCCHHHHHHHHHHhhcCcccCCCH
Confidence 9 99999887766666555433221110 1345679999999999999999999
Q ss_pred HHHHHHHH
Q 001143 1123 GDLYEMFV 1130 (1141)
Q Consensus 1123 ~ElL~~L~ 1130 (1141)
.++++.+.
T Consensus 252 ~~l~~~l~ 259 (261)
T cd05068 252 ETLQWKLE 259 (261)
T ss_pred HHHHHHHh
Confidence 99998764
No 188
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=8.8e-34 Score=312.16 Aligned_cols=259 Identities=27% Similarity=0.411 Sum_probs=201.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||.|+||.||+|.+. +..+++|+..... ....+. +.+|+.++++++||||+++++++....
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~----~~~e~~~l~~~~h~~i~~~~~~~~~~~ 73 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP----GDDFEI----IQQEISMLKECRHPNIVAYFGSYLRRD 73 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc----hhhHHH----HHHHHHHHHhCCCCChhceEEEEEeCC
Confidence 357999999999999999999974 4568888765432 112333 378999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++... ...+++..+..++.|++.||.|||++||+||||+|+||+++
T Consensus 74 --------------~~~l~~e~~~~~~l~~~~~~~----~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~ 135 (262)
T cd06613 74 --------------KLWIVMEYCGGGSLQDIYQVT----RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT 135 (262)
T ss_pred --------------EEEEEEeCCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC
Confidence 359999999999999998751 24689999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||.+........ ......++..|+|||.+..... ..++.++|||||||++|+|
T Consensus 136 ~~-------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~y~~Pe~~~~~~~-~~~~~~~Di~slG~~l~~~ 197 (262)
T cd06613 136 ED-------GDVKLADFGVSAQLTATIA----------KRKSFIGTPYWMAPEVAAVERK-GGYDGKCDIWALGITAIEL 197 (262)
T ss_pred CC-------CCEEECccccchhhhhhhh----------ccccccCCccccCchhhccccc-CCcCchhhhHHHHHHHHHH
Confidence 87 7899999999876543211 1123457889999999875211 3677899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||...........+......... .......+.++.+++.+||..||.+|||+
T Consensus 198 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~ 254 (262)
T cd06613 198 AELQPPMFDLHPMRALFLISKSNFPPPK-----------------------LKDKEKWSPVFHDFIKKCLTKDPKKRPTA 254 (262)
T ss_pred HhCCCCCCCCCHHHHHHHHHhccCCCcc-----------------------ccchhhhhHHHHHHHHHHcCCChhhCCCH
Confidence 9999999876655444433322111000 00011456679999999999999999999
Q ss_pred HHHHHHHH
Q 001143 1123 GDLYEMFV 1130 (1141)
Q Consensus 1123 ~ElL~~L~ 1130 (1141)
.+++.|.|
T Consensus 255 ~~il~~~~ 262 (262)
T cd06613 255 TKLLQHPF 262 (262)
T ss_pred HHHhcCCC
Confidence 99999865
No 189
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1e-33 Score=310.76 Aligned_cols=248 Identities=26% Similarity=0.391 Sum_probs=190.5
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 889 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g 889 (1141)
+.||+|+||.||+|++ .++.+++|+.. .. ...+... .+.+|++++++++||||+++++++.....
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~--~~-~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------ 67 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCR--ET-LPPDLKA----KFLQEARILKQYSHPNIVRLIGVCTQKQP------ 67 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecC--cc-CCHHHHH----HHHHHHHHHHhCCCCCcceEEEEEcCCCC------
Confidence 4799999999999987 45667777642 11 1222222 34799999999999999999999876543
Q ss_pred CCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCC
Q 001143 890 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 969 (1141)
Q Consensus 890 ~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~ 969 (1141)
.++||||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 68 --------~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~----- 130 (252)
T cd05084 68 --------IYIVMELVQGGDFLTFLRT----EGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEK----- 130 (252)
T ss_pred --------eEEEEeeccCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCC-----
Confidence 4999999999999999875 12358999999999999999999999999999999999999877
Q ss_pred CCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCC
Q 001143 970 GKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVP 1048 (1141)
Q Consensus 970 ~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~P 1048 (1141)
+.+||+|||.+......... . ......++..|+|||.+.+ ..++.++|||||||++|+|++ |..|
T Consensus 131 --~~~kl~dfg~~~~~~~~~~~---~-----~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~e~~~~~~~p 196 (252)
T cd05084 131 --NVLKISDFGMSREEEDGVYA---S-----TGGMKQIPVKWTAPEALNY----GRYSSESDVWSFGILLWEAFSLGAVP 196 (252)
T ss_pred --CcEEECccccCccccccccc---c-----cCCCCCCceeecCchhhcC----CCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 78999999998654321100 0 0011123467999999876 457889999999999999998 8999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEM 1128 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~ 1128 (1141)
|...........+........+ ...+..+.+++.+||+.||++|||+.++++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 249 (252)
T cd05084 197 YANLSNQQTREAIEQGVRLPCP---------------------------ELCPDAVYRLMERCWEYDPGQRPSFSTVHQE 249 (252)
T ss_pred ccccCHHHHHHHHHcCCCCCCc---------------------------ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9766655554444332221111 1345678999999999999999999999987
Q ss_pred HH
Q 001143 1129 FV 1130 (1141)
Q Consensus 1129 L~ 1130 (1141)
+.
T Consensus 250 l~ 251 (252)
T cd05084 250 LQ 251 (252)
T ss_pred Hh
Confidence 64
No 190
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=8.4e-34 Score=320.82 Aligned_cols=258 Identities=26% Similarity=0.438 Sum_probs=203.8
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||.|++|.||+|.+ .+..+++|...... ....+. +.+|+.+++.++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~----~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~~ 89 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK----QPKKEL----IINEILVMKELKNPNIVNFLDSFLVGD 89 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc----CchHHH----HHHHHHHHHhcCCCceeeeeeeEecCc
Confidence 46799999999999999999986 45667777654321 112223 378999999999999999999987644
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|..++.. ..+++.++..++.|++.||.|||++|++||||||+||+++
T Consensus 90 --------------~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~ 149 (296)
T cd06655 90 --------------ELFVVMEYLAGGSLTDVVTE------TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG 149 (296)
T ss_pred --------------eEEEEEEecCCCcHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 45999999999999999865 3589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||++........ ......++..|+|||.+.+ ..++.++|||||||++|+|
T Consensus 150 ~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slGvil~~l 208 (296)
T cd06655 150 MD-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEM 208 (296)
T ss_pred CC-------CCEEEccCccchhcccccc----------cCCCcCCCccccCcchhcC----CCCCchhhHHHHHHHHHHH
Confidence 77 7899999999875432111 1123458889999999875 4578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||...+.......+.....+.+.. ....+..+.++|.+||..||.+||++
T Consensus 209 ltg~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~dp~~Rpt~ 263 (296)
T cd06655 209 VEGEPPYLNENPLRALYLIATNGTPELQN-------------------------PEKLSPIFRDFLNRCLEMDVEKRGSA 263 (296)
T ss_pred HhCCCCCCCCCHHHHHHHHHhcCCcccCC-------------------------cccCCHHHHHHHHHHhhcChhhCCCH
Confidence 99999998766544433332222111100 01345678999999999999999999
Q ss_pred HHHHHHHHhhcCCC
Q 001143 1123 GDLYEMFVARTSSS 1136 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s~ 1136 (1141)
.++++|+|+.....
T Consensus 264 ~~il~~~~~~~~~~ 277 (296)
T cd06655 264 KELLQHPFLKLAKP 277 (296)
T ss_pred HHHhhChHhhhccc
Confidence 99999999986443
No 191
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=1.2e-33 Score=312.07 Aligned_cols=252 Identities=25% Similarity=0.384 Sum_probs=197.4
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.++|++.++||+|+||.||+|.+. +..+++|...... .. .+. +.+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~--~~---~~~----~~~E~~~l~~l~~~~i~~~~~~~~~~-- 73 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGT--MS---PES----FLEEAQIMKKLRHDKLVQLYAVVSEE-- 73 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCC--CC---HHH----HHHHHHHHHhcCCCceEEEEeEECCC--
Confidence 457899999999999999999874 4457777643221 11 122 37899999999999999999887432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.++++. .....+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 74 -------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~ 137 (260)
T cd05070 74 -------------PIYIVTEYMSKGSLLDFLKD---GEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGD 137 (260)
T ss_pred -------------CcEEEEEecCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeC
Confidence 23899999999999999975 22346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||.+..+...... ......++..|+|||++.+ ..++.++||||||+++|+|+
T Consensus 138 ~-------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l~ 197 (260)
T cd05070 138 G-------LVCKIADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELV 197 (260)
T ss_pred C-------ceEEeCCceeeeeccCcccc---------cccCCCCCccccChHHHhc----CCCcchhhhHHHHHHHHHHH
Confidence 7 78999999999765332111 1112235667999999865 56789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |..||.+....+....+.....+..+ ...+..+.+++.+||..||.+|||+
T Consensus 198 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rpt~ 250 (260)
T cd05070 198 TKGRVPYPGMNNREVLEQVERGYRMPCP---------------------------QDCPISLHELMLQCWKKDPEERPTF 250 (260)
T ss_pred hcCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CcCCHHHHHHHHHHcccCcccCcCH
Confidence 9 89999877666666655433222111 1345679999999999999999999
Q ss_pred HHHHHHHH
Q 001143 1123 GDLYEMFV 1130 (1141)
Q Consensus 1123 ~ElL~~L~ 1130 (1141)
.++.+.+.
T Consensus 251 ~~l~~~l~ 258 (260)
T cd05070 251 EYLQSFLE 258 (260)
T ss_pred HHHHHHHh
Confidence 99998764
No 192
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=4.6e-34 Score=313.32 Aligned_cols=253 Identities=26% Similarity=0.408 Sum_probs=200.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.++||+|+||.||+|.+. +..+++|..... ...+. +.+|+.++++++||||+++++++....
T Consensus 2 ~~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~------~~~~~----~~~e~~~~~~l~~~~i~~~~~~~~~~~ 71 (256)
T cd06612 2 EEVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE------EDLQE----IIKEISILKQCDSPYIVKYYGSYFKNT 71 (256)
T ss_pred cccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecH------HHHHH----HHHHHHHHHhCCCCcEeeeeeeeecCC
Confidence 467999999999999999999985 456777765322 11333 379999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
+.|++|||+++++|.+++.. ....+++..+..++.|++.||.|||+.+|+||||+|+||+++
T Consensus 72 --------------~~~l~~e~~~~~~L~~~l~~----~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~ 133 (256)
T cd06612 72 --------------DLWIVMEYCGAGSVSDIMKI----TNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN 133 (256)
T ss_pred --------------cEEEEEecCCCCcHHHHHHh----CccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC
Confidence 34999999999999999865 134689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+........ ......++..|+|||++.+ ..++.++||||||+++|+|
T Consensus 134 ~~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~s~G~il~~l 192 (256)
T cd06612 134 EE-------GQAKLADFGVSGQLTDTMA----------KRNTVIGTPFWMAPEVIQE----IGYNNKADIWSLGITAIEM 192 (256)
T ss_pred CC-------CcEEEcccccchhcccCcc----------ccccccCCccccCHHHHhc----CCCCchhhHHHHHHHHHHH
Confidence 87 7899999999876543211 1123457889999999876 4678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||......+....+.....+... .....+..+.+++.+||+.||.+|||+
T Consensus 193 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~i~~~l~~~P~~Rps~ 247 (256)
T cd06612 193 AEGKPPYSDIHPMRAIFMIPNKPPPTLS-------------------------DPEKWSPEFNDFVKKCLVKDPEERPSA 247 (256)
T ss_pred HhCCCCCCCcchhhhhhhhccCCCCCCC-------------------------chhhcCHHHHHHHHHHHhcChhhCcCH
Confidence 9999999865544333222111111000 011345678999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.|+++|+|+
T Consensus 248 ~~il~~~~~ 256 (256)
T cd06612 248 IQLLQHPFI 256 (256)
T ss_pred HHHhcCCCC
Confidence 999999885
No 193
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=6.2e-34 Score=316.75 Aligned_cols=256 Identities=30% Similarity=0.447 Sum_probs=205.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||.|++|.||+|.+. +..+++|+..... .......+ .+|+.++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~---~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~- 72 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE---AEDEIEDI----QQEIQFLSQCRSPYITKYYGSFLKGS- 72 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc---cchHHHHH----HHHHHHHHHcCCCCeeeeeEEEEECC-
Confidence 36889999999999999999984 5667787764332 12222333 78999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. .++++..+..++.|++.||.|||+++++||||+|+||+++.
T Consensus 73 -------------~~~~v~e~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~ 133 (274)
T cd06609 73 -------------KLWIIMEYCGGGSCLDLLKP------GKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSE 133 (274)
T ss_pred -------------eEEEEEEeeCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECC
Confidence 45999999999999999875 26899999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||.++.+..... ......+++.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 134 ~-------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~----~~~~~~sDv~slG~il~~l~ 192 (274)
T cd06609 134 E-------GDVKLADFGVSGQLTSTMS----------KRNTFVGTPFWMAPEVIKQ----SGYDEKADIWSLGITAIELA 192 (274)
T ss_pred C-------CCEEEcccccceeeccccc----------ccccccCCccccChhhhcc----CCCCchhhHHHHHHHHHHHH
Confidence 7 7899999999977653211 1123458889999999876 44889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|+.||...+.......+.....+.+.. ...+..+.+++.+||..||++|||++
T Consensus 193 tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~~l~~~p~~Rpt~~ 246 (274)
T cd06609 193 KGEPPLSDLHPMRVLFLIPKNNPPSLEG--------------------------NKFSKPFKDFVSLCLNKDPKERPSAK 246 (274)
T ss_pred hCCCCcccCchHHHHHHhhhcCCCCCcc--------------------------cccCHHHHHHHHHHhhCChhhCcCHH
Confidence 9999998766555444443332222111 01455689999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 001143 1124 DLYEMFVARTSS 1135 (1141)
Q Consensus 1124 ElL~~L~~~~~s 1135 (1141)
++++|+|+....
T Consensus 247 ~il~~~~~~~~~ 258 (274)
T cd06609 247 ELLKHKFIKKAK 258 (274)
T ss_pred HHhhChhhcCCC
Confidence 999999997643
No 194
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=5.1e-34 Score=329.11 Aligned_cols=262 Identities=24% Similarity=0.368 Sum_probs=198.1
Q ss_pred CCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg 876 (1141)
.++|++.++||+|+||.||+|.+.+ ..+|+|+++.. ......+.+ .+|+.++.++ +||||+++++
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~---~~~~~~~~~----~~E~~~~~~l~~h~niv~~~~ 78 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEG---ATASEYKAL----MTELKILIHIGHHLNVVNLLG 78 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCC---CCHHHHHHH----HHHHHHHHhhccCcchhheee
Confidence 3479999999999999999997532 45788865422 122222333 7899999999 7999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc------------------------------------
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------------------------ 920 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~------------------------------------ 920 (1141)
++...+. ..++||||+++++|.+++......
T Consensus 79 ~~~~~~~-------------~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (337)
T cd05054 79 ACTKPGG-------------PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASS 145 (337)
T ss_pred eEecCCC-------------CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCcccccccc
Confidence 8765331 458999999999999998642110
Q ss_pred --------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeecc
Q 001143 921 --------------------GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFD 980 (1141)
Q Consensus 921 --------------------~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFG 980 (1141)
...++++..+..++.||+.||+|||++||+||||||+|||++.+ +.++|+|||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~-------~~vkL~DfG 218 (337)
T cd05054 146 GFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSEN-------NVVKICDFG 218 (337)
T ss_pred ccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCC-------CcEEEeccc
Confidence 01368999999999999999999999999999999999999977 789999999
Q ss_pred ccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-HH
Q 001143 981 RAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-IH 1058 (1141)
Q Consensus 981 lA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~e-l~ 1058 (1141)
++..+...... .......++..|+|||++.+ ..++.++|||||||++|||++ |..||.+....+ ..
T Consensus 219 ~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~ 286 (337)
T cd05054 219 LARDIYKDPDY--------VRKGDARLPLKWMAPESIFD----KVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFC 286 (337)
T ss_pred cchhcccCcch--------hhccCCCCCccccCcHHhcC----CCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHH
Confidence 99765332111 01123346778999999876 568899999999999999998 999997644332 22
Q ss_pred HHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1059 DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1059 ~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
..+..+..+..+ ...+.++.+++.+||+.+|++||++.|+++++...
T Consensus 287 ~~~~~~~~~~~~---------------------------~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 287 RRLKEGTRMRAP---------------------------EYATPEIYSIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHHhccCCCCCC---------------------------ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 333222211110 13445789999999999999999999999998654
No 195
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-34 Score=337.53 Aligned_cols=257 Identities=28% Similarity=0.474 Sum_probs=206.8
Q ss_pred CceEeeeecccCceEEEEEEECC-----cc-EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGS-----AD-AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~-----~~-vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
+-.+.++||+|+||.||+|+... .. ||+|..+.+ .....+...++ .+|+++|++++|||||++||+...
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~-~~~~~~~~~e~----m~EArvMr~l~H~NVVr~yGVa~~ 232 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGS-SELTKEQIKEF----MKEARVMRQLNHPNVVRFYGVAVL 232 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeeccc-ccccHHHHHHH----HHHHHHHHhCCCCCEEEEEEEEcC
Confidence 44677999999999999998732 12 566654431 12344556666 899999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
...+ ++|||+|+||+|.+++++. + ..++..+...++.|.+.||+|||++++|||||-+.|+|
T Consensus 233 ~~Pl--------------~ivmEl~~gGsL~~~L~k~---~-~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL 294 (474)
T KOG0194|consen 233 EEPL--------------MLVMELCNGGSLDDYLKKN---K-KSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCL 294 (474)
T ss_pred CCcc--------------EEEEEecCCCcHHHHHHhC---C-CCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHhe
Confidence 6654 9999999999999999872 2 25999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ ..+||+|||+++.-...... .....-...|+|||.+.. ..|++++|||||||++|
T Consensus 295 ~~~~-------~~vKISDFGLs~~~~~~~~~----------~~~~klPirWLAPEtl~~----~~~s~kTDV~sfGV~~~ 353 (474)
T KOG0194|consen 295 YSKK-------GVVKISDFGLSRAGSQYVMK----------KFLKKLPIRWLAPETLNT----GIFSFKTDVWSFGVLLW 353 (474)
T ss_pred ecCC-------CeEEeCccccccCCcceeec----------cccccCcceecChhhhcc----CccccccchhheeeeEE
Confidence 9987 67899999998654311100 001124578999999986 58999999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1041 ELLT-LQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1041 ELLT-Gk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+++ |..||.+....++...| ..+.+...+. ..+..+..++.+||..||++
T Consensus 354 Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~---------------------------~~p~~~~~~~~~c~~~~p~~ 406 (474)
T KOG0194|consen 354 EIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPS---------------------------KTPKELAKVMKQCWKKDPED 406 (474)
T ss_pred eeeccCCCCCCCCCHHHHHHHHHhcCccCCCCC---------------------------CCHHHHHHHHHHhccCChhh
Confidence 9999 88999999999888888 4454433322 45667889999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
||+|.++.+.+.....
T Consensus 407 R~tm~~i~~~l~~~~~ 422 (474)
T KOG0194|consen 407 RPTMSTIKKKLEALEK 422 (474)
T ss_pred ccCHHHHHHHHHHHHh
Confidence 9999999988766543
No 196
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=9.3e-34 Score=314.23 Aligned_cols=261 Identities=27% Similarity=0.396 Sum_probs=196.8
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|+..+.||+|+||.||+|.+. +..+++|......... ... .....+.+|+.++++++||||+++++++.+..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~--~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 77 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESP--ETS-KEVSALECEIQLLKNLQHERIVQYYGCLRDRA- 77 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCc--hhH-HHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCC-
Confidence 36899999999999999999874 5667777654332111 111 11123478999999999999999999886532
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
....++||||+++++|.+++.. ...+++..+..++.||+.||+|||+++|+||||||+||+++.
T Consensus 78 -----------~~~~~l~~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~ 141 (266)
T cd06651 78 -----------EKTLTIFMEYMPGGSVKDQLKA-----YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDS 141 (266)
T ss_pred -----------CCEEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECC
Confidence 1245899999999999999975 235899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||++..+...... ........++..|+|||++.+ ..++.++|||||||++|+|+
T Consensus 142 ~-------~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~i~~el~ 203 (266)
T cd06651 142 A-------GNVKLGDFGASKRLQTICMS-------GTGIRSVTGTPYWMSPEVISG----EGYGRKADVWSLGCTVVEML 203 (266)
T ss_pred C-------CCEEEccCCCcccccccccc-------CCccccCCccccccCHHHhCC----CCCCchhhhHHHHHHHHHHH
Confidence 7 78999999998765321111 001123457889999999875 45788999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHH-hCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 TLQVPYMGLSELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~-~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+|+.||......+....+. ....+.++ ...++.+.+++ +||..+|++||++
T Consensus 204 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li-~~~~~~p~~Rp~~ 255 (266)
T cd06651 204 TEKPPWAEYEAMAAIFKIATQPTNPQLP---------------------------SHISEHARDFL-GCIFVEARHRPSA 255 (266)
T ss_pred HCCCCccccchHHHHHHHhcCCCCCCCc---------------------------hhcCHHHHHHH-HHhcCChhhCcCH
Confidence 9999998654433332221 11111111 13445677888 6888999999999
Q ss_pred HHHHHHHHhh
Q 001143 1123 GDLYEMFVAR 1132 (1141)
Q Consensus 1123 ~ElL~~L~~~ 1132 (1141)
+||++|+|+.
T Consensus 256 ~eil~hp~~~ 265 (266)
T cd06651 256 EELLRHPFAQ 265 (266)
T ss_pred HHHhcCcccc
Confidence 9999999975
No 197
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=2.4e-34 Score=318.57 Aligned_cols=258 Identities=26% Similarity=0.389 Sum_probs=196.9
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||+|+||.||+|.+. +..+++|+.+... ...... +.+|+.+++.++||||+++++.+....
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~----~~~e~~~~~~l~h~~ii~~~~~~~~~~ 79 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP----GEDFAV----VQQEIIMMKDCKHSNIVAYFGSYLRRD 79 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc----hhHHHH----HHHHHHHHHhCCCCCeeeEEEEEEeCC
Confidence 357899999999999999999974 5667777754331 122222 368999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ...+++.++..++.|++.||.|||++||+|+||||+||+++
T Consensus 80 --------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~ 140 (267)
T cd06645 80 --------------KLWICMEFCGGGSLQDIYHV-----TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT 140 (267)
T ss_pred --------------EEEEEEeccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC
Confidence 34999999999999999875 34689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+....... .......|+..|+|||++... ....++.++|||||||++|+|
T Consensus 141 ~~-------~~~~l~dfg~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~~-~~~~~~~~~DvwSlG~il~~l 202 (267)
T cd06645 141 DN-------GHVKLADFGVSAQITATI----------AKRKSFIGTPYWMAPEVAAVE-RKGGYNQLCDIWAVGITAIEL 202 (267)
T ss_pred CC-------CCEEECcceeeeEccCcc----------cccccccCcccccChhhhccc-cCCCCCchhhhHHHHHHHHHH
Confidence 77 789999999986543211 111234689999999997521 124577899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|..||...........+......... . ......+..+.+++.+||..||++||++
T Consensus 203 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~--~---------------------~~~~~~~~~~~~li~~~l~~~P~~R~~~ 259 (267)
T cd06645 203 AELQPPMFDLHPMRALFLMTKSNFQPPK--L---------------------KDKMKWSNSFHHFVKMALTKNPKKRPTA 259 (267)
T ss_pred hcCCCCcccccchhhHHhhhccCCCCCc--c---------------------cccCCCCHHHHHHHHHHccCCchhCcCH
Confidence 9999998754433322222111110000 0 0001334568999999999999999999
Q ss_pred HHHHHHHH
Q 001143 1123 GDLYEMFV 1130 (1141)
Q Consensus 1123 ~ElL~~L~ 1130 (1141)
+++++|+|
T Consensus 260 ~~ll~~~~ 267 (267)
T cd06645 260 EKLLQHPF 267 (267)
T ss_pred HHHhcCCC
Confidence 99999976
No 198
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=4.6e-34 Score=322.96 Aligned_cols=258 Identities=26% Similarity=0.420 Sum_probs=201.1
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||.||+|.+ .+..+++|...... ....+. +.+|+.+++.++||||+++++++....
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~----~~~~~~----~~~e~~~l~~~~h~~i~~~~~~~~~~~ 89 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQ----QPKKEL----IINEILVMRENKNPNIVNYLDSYLVGD 89 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCc----cchHHH----HHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 36799999999999999999987 46677777654321 112222 378999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++
T Consensus 90 --------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~ 149 (297)
T cd06656 90 --------------ELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG 149 (297)
T ss_pred --------------EEEEeecccCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 34999999999999999865 3588999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+........ ......+++.|+|||.+.+ ..++.++|||||||++|+|
T Consensus 150 ~~-------~~~~l~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slGvil~~l 208 (297)
T cd06656 150 MD-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEM 208 (297)
T ss_pred CC-------CCEEECcCccceEccCCcc----------CcCcccCCccccCHHHHcC----CCCCcHHHHHHHHHHHHHH
Confidence 77 7899999999865432111 1123458889999999876 5578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||...+.......+.....+... .....+..+.+++.+||..||.+||++
T Consensus 209 ~tg~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~ 263 (297)
T cd06656 209 VEGEPPYLNENPLRALYLIATNGTPELQ-------------------------NPERLSAVFRDFLNRCLEMDVDRRGSA 263 (297)
T ss_pred HhCCCCCCCCCcchheeeeccCCCCCCC-------------------------CccccCHHHHHHHHHHccCChhhCcCH
Confidence 9999999765433222111111111100 011345668999999999999999999
Q ss_pred HHHHHHHHhhcCCC
Q 001143 1123 GDLYEMFVARTSSS 1136 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s~ 1136 (1141)
.++++|+|+.....
T Consensus 264 ~~il~~~~~~~~~~ 277 (297)
T cd06656 264 KELLQHPFLKLAKP 277 (297)
T ss_pred HHHhcCchhccccc
Confidence 99999999975543
No 199
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.1e-33 Score=313.76 Aligned_cols=259 Identities=24% Similarity=0.343 Sum_probs=186.8
Q ss_pred eeecccCceEEEEEEEC-C---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG-S---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~-~---~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
+.||+|+||.||+|... . ..+++|. +... ....... .+.+|+.+++.++||||+++++.+.+...
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~--~~~~-~~~~~~~----~~~~e~~~~~~l~h~nii~~~~~~~~~~~---- 69 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKE--LRAS-ATPDEQL----LFLQEVQPYRELNHPNVLQCLGQCIESIP---- 69 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEee--cCcc-CChHHHH----HHHHHHHHHHhCCCCCcceEEEEECCCCc----
Confidence 46999999999999752 2 2334443 2221 1222222 34789999999999999999999876543
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 967 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~ 967 (1141)
.++||||+++|+|.+++...........++..+..++.||+.||+|||++||+||||||+|||++.+
T Consensus 70 ----------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~--- 136 (269)
T cd05042 70 ----------YLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTAD--- 136 (269)
T ss_pred ----------eEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCC---
Confidence 4999999999999999976432223345788889999999999999999999999999999999887
Q ss_pred CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc---CCCCCCchhhHHHHHHHHHHHHh
Q 001143 968 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 968 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||++......... .......+++.|+|||++.... ....++.++|||||||++|||++
T Consensus 137 ----~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 204 (269)
T cd05042 137 ----LSVKIGDYGLALEQYPEDYY--------ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFT 204 (269)
T ss_pred ----CcEEEeccccccccccchhe--------eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHh
Confidence 78999999998643221100 0112234677899999975421 12456789999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 -Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|..||......+....+.......++. +......+..+.+++..|| .||++|||++
T Consensus 205 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~ 261 (269)
T cd05042 205 AADQPYPDLSDEQVLKQVVREQDIKLPK----------------------PQLDLKYSDRWYEVMQFCW-LDPETRPTAE 261 (269)
T ss_pred CCCCCCCcCCHHHHHHHHhhccCccCCC----------------------CcccccCCHHHHHHHHHHh-cCcccccCHH
Confidence 788998766555544443322222111 0111145566788899998 5999999999
Q ss_pred HHHHHH
Q 001143 1124 DLYEMF 1129 (1141)
Q Consensus 1124 ElL~~L 1129 (1141)
+|++.+
T Consensus 262 ~v~~~l 267 (269)
T cd05042 262 EVHELL 267 (269)
T ss_pred HHHHHh
Confidence 999875
No 200
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=5.1e-34 Score=318.75 Aligned_cols=264 Identities=25% Similarity=0.384 Sum_probs=199.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~ 881 (1141)
...|++.+.||+|+||.||+|.+. +..+++|+.... ......+ ..|+.+++++ +||||+++++++...
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-----~~~~~~~----~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-----EDEEEEI----KLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-----hHHHHHH----HHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 357899999999999999999984 456777765332 1222233 6899999998 699999999998643
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. .......++||||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 86 ~~--------~~~~~~~~iv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili 154 (282)
T cd06636 86 SP--------PGHDDQLWLVMEFCGAGSVTDLVKNT---KGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL 154 (282)
T ss_pred cc--------cCCCCEEEEEEEeCCCCcHHHHHHHc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE
Confidence 21 11233679999999999999998752 23458889999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~ 1040 (1141)
+.+ +.++|+|||.+........ ......|++.|+|||.+.... ....++.++|||||||++|
T Consensus 155 ~~~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~ 217 (282)
T cd06636 155 TEN-------AEVKLVDFGVSAQLDRTVG----------RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAI 217 (282)
T ss_pred CCC-------CCEEEeeCcchhhhhcccc----------CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHH
Confidence 877 7899999999865432110 122346899999999976321 1245788999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|..||...........+.....+... ....+..+.++|.+||..||.+||
T Consensus 218 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~cl~~~p~~Rp 271 (282)
T cd06636 218 EMAEGAPPLCDMHPMRALFLIPRNPPPKLK--------------------------SKKWSKKFIDFIEGCLVKNYLSRP 271 (282)
T ss_pred HHHhCCCCccccCHHhhhhhHhhCCCCCCc--------------------------ccccCHHHHHHHHHHhCCChhhCc
Confidence 999999999765543333222221111100 013556799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
|+.|+++|+|+
T Consensus 272 ~~~ell~~~~~ 282 (282)
T cd06636 272 STEQLLKHPFI 282 (282)
T ss_pred CHHHHhcCCCC
Confidence 99999999985
No 201
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=6.8e-34 Score=314.61 Aligned_cols=269 Identities=25% Similarity=0.360 Sum_probs=205.7
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 879 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~ 879 (1141)
...++|++.+.||+|++|.||+|.+. +..+++|+..... ...+. +.+|+.+++++ .||||+++++++.
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~----~~~e~~~l~~~~~h~~i~~~~~~~~ 73 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-----DEEEE----IKEEYNILRKYSNHPNIATFYGAFI 73 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-----hhHHH----HHHHHHHHHHhcCCCChheEEEEEE
Confidence 44678999999999999999999984 4567777754321 12233 37899999999 6999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
..... ......++||||+++++|.+++...... ...+++..+..++.|++.||.|||++|++||||+|+||
T Consensus 74 ~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni 144 (275)
T cd06608 74 KKNPP--------GNDDQLWLVMELCGGGSVTDLVKGLRKK-GKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNI 144 (275)
T ss_pred ecCCC--------CcceEEEEEEEcCCCCcHHHHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHE
Confidence 64420 1234579999999999999998764322 34689999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGvi 1038 (1141)
+++.+ +.++|+|||.+........ ......|+..|+|||++.... ....++.++|||||||+
T Consensus 145 ~~~~~-------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~i 207 (275)
T cd06608 145 LLTKN-------AEVKLVDFGVSAQLDSTLG----------RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGIT 207 (275)
T ss_pred EEccC-------CeEEECCCccceecccchh----------hhcCccccccccCHhHhcccccccCCccccccHHHhHHH
Confidence 99887 7899999999865432111 112345899999999986422 23456789999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|+|++|+.||...........+.....+.... ....+..+.+++.+||..||.+
T Consensus 208 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~dp~~ 262 (275)
T cd06608 208 AIELADGKPPLCDMHPMRALFKIPRNPPPTLKS-------------------------PENWSKKFNDFISECLIKNYEQ 262 (275)
T ss_pred HHHHHhCCCCccccchHHHHHHhhccCCCCCCc-------------------------hhhcCHHHHHHHHHHhhcChhh
Confidence 999999999997655444433333222211110 0134567999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001143 1119 RPTAGDLYEMFVA 1131 (1141)
Q Consensus 1119 RPSa~ElL~~L~~ 1131 (1141)
|||+.++++|+|.
T Consensus 263 Rpt~~~ll~~~~~ 275 (275)
T cd06608 263 RPFMEELLEHPFI 275 (275)
T ss_pred CcCHHHHhcCCCC
Confidence 9999999999884
No 202
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.2e-33 Score=321.50 Aligned_cols=270 Identities=26% Similarity=0.303 Sum_probs=205.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|++|+||+|... +..+++|...... ... ......+..|+++++.++||||+++++.+.+..
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~--~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 74 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKE--MIK---RNKVKRVLTEQEILATLDHPFLPTLYASFQTET- 74 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccc--cch---HHHHHHHHHHHHHHHhCCCCCchhheeeeecCC-
Confidence 36899999999999999999984 4667777654321 111 111223478999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+.+++|.+++.. .....+++..+..++.||+.||+|||+.|++||||||+||+++.
T Consensus 75 -------------~~~lv~e~~~~~~L~~~~~~---~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~ 138 (316)
T cd05574 75 -------------YLCLVMDYCPGGELFRLLQR---QPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHE 138 (316)
T ss_pred -------------EEEEEEEecCCCCHHHHHHh---CCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcC
Confidence 35999999999999999875 22346999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccc-------------------cCCCCCCCCccCCCcccchhhhccccCCC
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-------------------HRGIPAPDVCVGTPRWMAPEVLRAMHKPN 1024 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-------------------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 1024 (1141)
+ +.++|+|||++............. ...........||..|+|||++.+ .
T Consensus 139 ~-------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~----~ 207 (316)
T cd05574 139 S-------GHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISG----D 207 (316)
T ss_pred C-------CCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcC----C
Confidence 7 789999999987543221100000 000011223468999999999876 4
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHH
Q 001143 1025 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1104 (1141)
Q Consensus 1025 ~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1104 (1141)
.++.++||||||+++|+|++|+.||.+.+.......+..... ..+. ....+..+
T Consensus 208 ~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~-------------------------~~~~~~~~ 261 (316)
T cd05574 208 GHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEV-TFPG-------------------------SPPVSSSA 261 (316)
T ss_pred CCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCc-cCCC-------------------------ccccCHHH
Confidence 578999999999999999999999987665554443322111 0000 00246679
Q ss_pred HHHHHHhcccCCCCCCC----HHHHHHHHHhhcC
Q 001143 1105 VDVFRRCTEENPTERPT----AGDLYEMFVARTS 1134 (1141)
Q Consensus 1105 ~dLI~~cL~~DP~~RPS----a~ElL~~L~~~~~ 1134 (1141)
.+++.+||..||++||| ++|+++|+|+...
T Consensus 262 ~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~ 295 (316)
T cd05574 262 RDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV 295 (316)
T ss_pred HHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence 99999999999999999 9999999998754
No 203
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.1e-34 Score=336.62 Aligned_cols=278 Identities=20% Similarity=0.255 Sum_probs=196.7
Q ss_pred CCceEeeeecccCceEEEEEEECC----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGS----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.+|++.+.||+|+||.||+|...+ ..+++|.. ... .. ..+|+.++++++|||||++++++...
T Consensus 92 ~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~--~~~-------~~----~~~E~~il~~l~h~~iv~~~~~~~~~ 158 (392)
T PHA03207 92 MQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAV--TGG-------KT----PGREIDILKTISHRAIINLIHAYRWK 158 (392)
T ss_pred CceEEEEeecCCCCeEEEEEEEcCCccceeEEEEec--ccc-------cc----HHHHHHHHHhcCCCCccceeeeEeeC
Confidence 469999999999999999997633 34555543 211 11 15799999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+. ++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+|||+
T Consensus 159 ~--------------~~~lv~e~~~-~~l~~~l~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill 218 (392)
T PHA03207 159 S--------------TVCMVMPKYK-CDLFTYVDR-----SGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL 218 (392)
T ss_pred C--------------EEEEEehhcC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE
Confidence 4 3499999996 789888854 3469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.++|+|||++..+...... .......||+.|+|||++.+ ..++.++|||||||++||
T Consensus 219 ~~~-------~~~~l~DfG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DvwslGvil~e 279 (392)
T PHA03207 219 DEP-------ENAVLGDFGAACKLDAHPDT--------PQCYGWSGTLETNSPELLAL----DPYCAKTDIWSAGLVLFE 279 (392)
T ss_pred cCC-------CCEEEccCccccccCccccc--------ccccccccccCccCHhHhcC----CCCCchhhHHHHHHHHHH
Confidence 887 78999999998765432111 11123569999999999876 567899999999999999
Q ss_pred HHhCCCCCCCCCH----HHHHHHHHhCCCCCc--hhHHh-hhccCccccccccCCCCCCch--hhhhhHHHHHHHHHHhc
Q 001143 1042 LLTLQVPYMGLSE----LEIHDLIQMGKRPRL--TDELE-ALGSCHEHEVAQSGSGFEKPE--AELETLSFLVDVFRRCT 1112 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~----~el~~~I~~~~~p~l--~~~l~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~L~dLI~~cL 1112 (1141)
|++|+.||.+... ..+...+........ +.... ................+..+. .....+.++.++|.+||
T Consensus 280 l~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml 359 (392)
T PHA03207 280 MSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKML 359 (392)
T ss_pred HHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHh
Confidence 9999999976432 122222221111111 00000 000000000000000011110 01134567889999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhcCC
Q 001143 1113 EENPTERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1113 ~~DP~~RPSa~ElL~~L~~~~~s 1135 (1141)
..||.+|||+.|++.|+||....
T Consensus 360 ~~dp~~Rpsa~e~l~~p~f~~~~ 382 (392)
T PHA03207 360 TFDQEFRPSAQDILSLPLFTKEP 382 (392)
T ss_pred ccChhhCCCHHHHhhCchhhccc
Confidence 99999999999999999997543
No 204
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.1e-33 Score=320.87 Aligned_cols=263 Identities=24% Similarity=0.365 Sum_probs=201.9
Q ss_pred CCCceEeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 874 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~---------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 874 (1141)
.++|.+.+.||+|+||.||+|.+.+ ..+|+|+.... ........ +..|+.+++++ +||||+++
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~---~~~~~~~~----~~~e~~~l~~l~~h~~i~~~ 89 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSD---ATEKDLSD----LISEMEMMKMIGKHKNIINL 89 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCC---CChHHHHH----HHHHHHHHHHhcCCCCEeeE
Confidence 3679999999999999999998632 24677764322 11222233 37899999999 79999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 943 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----------~~~~Ls~~~i~~Ia~QIa~gL~y 943 (1141)
++++..... .++||||+++++|.+++...... ....+++.+++.++.||+.||+|
T Consensus 90 ~~~~~~~~~--------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~ 155 (307)
T cd05098 90 LGACTQDGP--------------LYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEY 155 (307)
T ss_pred EEEEecCCc--------------eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHH
Confidence 999876543 49999999999999999763211 12358999999999999999999
Q ss_pred HHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001143 944 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1023 (1141)
Q Consensus 944 LHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1023 (1141)
||++|++||||||+||+++.+ +.+||+|||.+.......... ......+++.|+|||++.+
T Consensus 156 lH~~gi~H~dlkp~Nill~~~-------~~~kL~dfg~a~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~---- 216 (307)
T cd05098 156 LASKKCIHRDLAARNVLVTED-------NVMKIADFGLARDIHHIDYYK--------KTTNGRLPVKWMAPEALFD---- 216 (307)
T ss_pred HHHCCcccccccHHheEEcCC-------CcEEECCCcccccccccchhh--------ccccCCCccceeChHHhcc----
Confidence 999999999999999999877 789999999987543211100 0011224568999999876
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHH
Q 001143 1024 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1102 (1141)
Q Consensus 1024 ~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1141)
..++.++|||||||++|+|++ |..||.+....++...+........+ ...+.
T Consensus 217 ~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~ 269 (307)
T cd05098 217 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKP---------------------------SNCTN 269 (307)
T ss_pred CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCCCCCC---------------------------CcCCH
Confidence 567899999999999999998 89999877666666655443322111 13456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1103 FLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1103 ~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
++.+++.+||..+|.+|||+.++++++.....
T Consensus 270 ~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~ 301 (307)
T cd05098 270 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRILA 301 (307)
T ss_pred HHHHHHHHHcccChhhCcCHHHHHHHHHHHHH
Confidence 78999999999999999999999999876543
No 205
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.5e-33 Score=314.87 Aligned_cols=265 Identities=22% Similarity=0.348 Sum_probs=200.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
.++|++.++||+|+||.||+|.+. +..+|+|.. .... ....... +.+|+.+++.++||||++++++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~--~~~~-~~~~~~~----~~~e~~~l~~l~~~~i~~~~~~ 77 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTV--NESA-SLRERIE----FLNEASVMKGFTCHHVVRLLGV 77 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEEC--CCcC-CHHHHHH----HHHHHHHHHhCCCCCeeeEEEE
Confidence 467999999999999999999753 224566653 2211 1222222 3789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----GEKHVSVKLALFIAQDVAAALVELHSKHIMHR 952 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHr 952 (1141)
+.+... .++||||+++|+|.++++..... +...++...+..++.||+.||.|||+++|+||
T Consensus 78 ~~~~~~--------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~ 143 (288)
T cd05061 78 VSKGQP--------------TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHR 143 (288)
T ss_pred EcCCCC--------------cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCC
Confidence 876543 39999999999999999763221 12346778899999999999999999999999
Q ss_pred CCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001143 953 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1032 (1141)
Q Consensus 953 DLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1032 (1141)
||||+||+++.+ +.++|+|||+++........ .......++..|+|||.+.+ ..++.++||
T Consensus 144 dikp~nili~~~-------~~~~L~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~~pE~~~~----~~~~~~~Dv 204 (288)
T cd05061 144 DLAARNCMVAHD-------FTVKIGDFGMTRDIYETDYY--------RKGGKGLLPVRWMAPESLKD----GVFTTSSDM 204 (288)
T ss_pred CCChheEEEcCC-------CcEEECcCCccccccccccc--------cccCCCcccccccCHHHhcc----CCCChHhHH
Confidence 999999999887 78999999998754321110 01112235678999999876 467899999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001143 1033 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1111 (1141)
Q Consensus 1033 WSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~c 1111 (1141)
|||||++|||++ |..||.+....+....+..+..+..+ ...+..+.+++.+|
T Consensus 205 wslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~ 257 (288)
T cd05061 205 WSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGYLDQP---------------------------DNCPERVTDLMRMC 257 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHH
Confidence 999999999998 78999877766665555433322111 13346799999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhcCCC
Q 001143 1112 TEENPTERPTAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1112 L~~DP~~RPSa~ElL~~L~~~~~s~ 1136 (1141)
|+.||++|||+.++++.+......+
T Consensus 258 l~~~p~~Rps~~~ll~~l~~~~~~~ 282 (288)
T cd05061 258 WQFNPKMRPTFLEIVNLLKDDLHPS 282 (288)
T ss_pred cCCChhHCcCHHHHHHHHHhhcCCC
Confidence 9999999999999999776654433
No 206
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=7.8e-34 Score=316.85 Aligned_cols=264 Identities=24% Similarity=0.335 Sum_probs=197.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHH-HhhCCCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM-LGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~i-L~~L~HpNIVkllg~~~~~~ 882 (1141)
++|++.+.||+|+||.||+|.+. +..+|+|..... ...... .. +..|+.+ ++.++||||+++++++..+.
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~--~~~~~~-~~----~~~e~~~~~~~~~~~~iv~~~~~~~~~~ 73 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRAT--VNSQEQ-KR----LLMDLDISMRSVDCPYTVTFYGALFREG 73 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecC--CCcHHH-HH----HHHHHHHHHHHcCCCCeeeeeEEEecCC
Confidence 47899999999999999999985 566777764332 222222 22 2456665 45668999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCCeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENILI 961 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~NILl 961 (1141)
. .++||||++ ++|.++++..... ...+++..++.++.||+.||+|||++ +++||||||+||++
T Consensus 74 ~--------------~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~ 137 (283)
T cd06617 74 D--------------VWICMEVMD-TSLDKFYKKVYDK-GLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI 137 (283)
T ss_pred c--------------EEEEhhhhc-ccHHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE
Confidence 3 499999997 7999888764322 35799999999999999999999997 99999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||.+..+.... ......++..|+|||.+.+......++.++|+|||||++|+
T Consensus 138 ~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~ 199 (283)
T cd06617 138 NRN-------GQVKLCDFGISGYLVDSV-----------AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIE 199 (283)
T ss_pred CCC-------CCEEEeeccccccccccc-----------ccccccCCccccChhhcCCcccccccCccccchhhHHHHHH
Confidence 887 789999999987543211 11123578899999998753333456889999999999999
Q ss_pred HHhCCCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTGk~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++|+.||.... ..+....+.....+..+. ...+.++.+++.+||..+|.+||
T Consensus 200 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~~p~~Rp 253 (283)
T cd06617 200 LATGRFPYDSWKTPFQQLKQVVEEPSPQLPA--------------------------EKFSPEFQDFVNKCLKKNYKERP 253 (283)
T ss_pred HHhCCCCCCccccCHHHHHHHHhcCCCCCCc--------------------------cccCHHHHHHHHHHccCChhhCc
Confidence 999999996422 222222222222111110 13456799999999999999999
Q ss_pred CHHHHHHHHHhhcCCC
Q 001143 1121 TAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~s~ 1136 (1141)
++.++++|+|+.....
T Consensus 254 ~~~~il~~~~~~~~~~ 269 (283)
T cd06617 254 NYPELLQHPFFELHLS 269 (283)
T ss_pred CHHHHhcCchhhhccc
Confidence 9999999999986543
No 207
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=1.6e-33 Score=310.47 Aligned_cols=249 Identities=24% Similarity=0.366 Sum_probs=192.5
Q ss_pred eeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~-----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
++||+|+||.||+|.+.. ..+++|+.. ..... ...+ .+.+|+.+++++.||||+++++++...
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~--~~~~~-~~~~----~~~~e~~~l~~l~h~~iv~~~~~~~~~----- 68 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLK--QEHIA-AGKK----EFLREASVMAQLDHPCIVRLIGVCKGE----- 68 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecc--cccch-HHHH----HHHHHHHHHHhcCCCCeeeEEEEEcCC-----
Confidence 479999999999998743 345666543 22111 2222 347899999999999999999986532
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
..++||||+++++|.+++.. ...+++..+..++.|++.||+|||.++++||||||+|||++.+
T Consensus 69 ----------~~~~v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~-- 131 (257)
T cd05060 69 ----------PLMLVMELAPLGPLLKYLKK-----RREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNR-- 131 (257)
T ss_pred ----------ceEEEEEeCCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCC--
Confidence 24899999999999999976 2368999999999999999999999999999999999999887
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-C
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-L 1045 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-G 1045 (1141)
+.+||+|||.++......... .......++..|+|||.+.+ ..++.++|||||||++|+|++ |
T Consensus 132 -----~~~kl~df~~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~~~~~g 195 (257)
T cd05060 132 -----HQAKISDFGMSRALGAGSDYY-------RATTAGRWPLKWYAPECINY----GKFSSKSDVWSYGVTLWEAFSYG 195 (257)
T ss_pred -----CcEEeccccccceeecCCccc-------ccccCccccccccCHHHhcC----CCCCccchHHHHHHHHHHHHcCC
Confidence 789999999987654322110 01111224567999999875 567899999999999999998 9
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
..||...+..+....+........+ ..++..+.+++.+||..||.+||++.++
T Consensus 196 ~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~~p~~Rp~~~~l 248 (257)
T cd05060 196 AKPYGEMKGAEVIAMLESGERLPRP---------------------------EECPQEIYSIMLSCWKYRPEDRPTFSEL 248 (257)
T ss_pred CCCcccCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHhcCChhhCcCHHHH
Confidence 9999877766666665443321111 1345678999999999999999999999
Q ss_pred HHHHHhh
Q 001143 1126 YEMFVAR 1132 (1141)
Q Consensus 1126 L~~L~~~ 1132 (1141)
++.+...
T Consensus 249 ~~~l~~~ 255 (257)
T cd05060 249 ESTFRRD 255 (257)
T ss_pred HHHHHhc
Confidence 9987653
No 208
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=1e-33 Score=311.42 Aligned_cols=248 Identities=26% Similarity=0.401 Sum_probs=199.5
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++.+|++.+.||+|+||.||++...+..+++|+..... ..+. +.+|+.++++++||||+++++++....
T Consensus 4 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~------~~~~----~~~e~~~l~~~~~~~i~~~~~~~~~~~- 72 (254)
T cd05083 4 NLQKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCDV------TAQA----FLEETAVMTKLHHKNLVRLLGVILHNG- 72 (254)
T ss_pred cHHHceeeeeeccCCCCceEecccCCCceEEEeecCcc------hHHH----HHHHHHHHHhCCCCCcCeEEEEEcCCC-
Confidence 35679999999999999999999888889988754321 1223 378999999999999999999876432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++++|.+++.. .....+++..+..++.|++.||.|||++|++||||||+||+++.
T Consensus 73 --------------~~~v~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~ 135 (254)
T cd05083 73 --------------LYIVMELMSKGNLVNFLRT---RGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSE 135 (254)
T ss_pred --------------cEEEEECCCCCCHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcC
Confidence 3899999999999999976 23346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.+....... .....+..|+|||++.+ ..++.++|||||||++|+|+
T Consensus 136 ~-------~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~y~~pe~~~~----~~~~~~~Dv~slG~~l~el~ 191 (254)
T cd05083 136 D-------GVAKVSDFGLARVGSMGV-------------DNSKLPVKWTAPEALKH----KKFSSKSDVWSYGVLLWEVF 191 (254)
T ss_pred C-------CcEEECCCccceeccccC-------------CCCCCCceecCHHHhcc----CCcCchhhHHHHHHHHHHHH
Confidence 7 789999999986532210 11224567999999875 56789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |+.||......+....+..+..+... ...+..+.+++.+||+.+|.+||++
T Consensus 192 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~ 244 (254)
T cd05083 192 SYGRAPYPKMSLKEVKECVEKGYRMEPP---------------------------EGCPADVYVLMTSCWETEPKKRPSF 244 (254)
T ss_pred hCCCCCCccCCHHHHHHHHhCCCCCCCC---------------------------CcCCHHHHHHHHHHcCCChhhCcCH
Confidence 8 99999877766665555443222111 1445678999999999999999999
Q ss_pred HHHHHHHH
Q 001143 1123 GDLYEMFV 1130 (1141)
Q Consensus 1123 ~ElL~~L~ 1130 (1141)
+++++.+.
T Consensus 245 ~~l~~~l~ 252 (254)
T cd05083 245 HKLREKLE 252 (254)
T ss_pred HHHHHHHc
Confidence 99998764
No 209
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.2e-33 Score=333.25 Aligned_cols=261 Identities=25% Similarity=0.345 Sum_probs=197.8
Q ss_pred CCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg 876 (1141)
-.+|.+.++||+|+||.||+|++.+ ..||+|+.+.. ......+. +.+|+.+++++. |||||++++
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~---~~~~~~~~----~~~Ei~~l~~l~~HpnIv~l~~ 108 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPT---ARSSEKQA----LMSELKIMTHLGPHLNIVNLLG 108 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCC---CChHHHHH----HHHHHHHHHhcCCCCCeeeEEE
Confidence 4568999999999999999998632 24777764322 12222233 489999999996 999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc------------------------------------
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------------------------ 920 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~------------------------------------ 920 (1141)
++.+... .++||||+++|+|.+++......
T Consensus 109 ~~~~~~~--------------~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (400)
T cd05105 109 ACTKSGP--------------IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENK 174 (400)
T ss_pred EEccCCc--------------eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhccc
Confidence 9976543 49999999999999998753210
Q ss_pred -------------------------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHH
Q 001143 921 -------------------------------------------------------GEKHVSVKLALFIAQDVAAALVELH 945 (1141)
Q Consensus 921 -------------------------------------------------------~~~~Ls~~~i~~Ia~QIa~gL~yLH 945 (1141)
....+++..+..++.||+.||+|||
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH 254 (400)
T cd05105 175 GDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA 254 (400)
T ss_pred ccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1135788899999999999999999
Q ss_pred HCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001143 946 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1025 (1141)
Q Consensus 946 s~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1025 (1141)
+++|+||||||+|||++.+ +.+||+|||+++........ .......+++.|+|||.+.+ ..
T Consensus 255 ~~~ivH~dikp~Nill~~~-------~~~kL~DfGla~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~ 315 (400)
T cd05105 255 SKNCVHRDLAARNVLLAQG-------KIVKICDFGLARDIMHDSNY--------VSKGSTFLPVKWMAPESIFD----NL 315 (400)
T ss_pred hCCeeCCCCChHhEEEeCC-------CEEEEEeCCcceeccccccc--------cccCCcCCCcceEChhhhcC----CC
Confidence 9999999999999999887 78999999998764322110 11123346788999999876 56
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHH
Q 001143 1026 YGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1103 (1141)
Q Consensus 1026 ~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1141)
++.++|||||||++|+|++ |..||....... ....+..+..+..+ ...+..
T Consensus 316 ~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~ 368 (400)
T cd05105 316 YTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRMAKP---------------------------DHATQE 368 (400)
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCCCCC---------------------------ccCCHH
Confidence 7899999999999999997 999997644332 22333322211110 145567
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1104 LVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1104 L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
+.+++.+||+.||++||++.+|.+.+...
T Consensus 369 l~~li~~cl~~dP~~RPt~~~l~~~l~~l 397 (400)
T cd05105 369 VYDIMVKCWNSEPEKRPSFLHLSDIVESL 397 (400)
T ss_pred HHHHHHHHCccCHhHCcCHHHHHHHHHHH
Confidence 99999999999999999999999987653
No 210
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=7.6e-34 Score=311.75 Aligned_cols=255 Identities=26% Similarity=0.383 Sum_probs=198.7
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|+||.||+|.+. +..+++|...... ......+. +.+|+.++++++||||+++++.+....
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~----~~~E~~~l~~~~h~~i~~~~~~~~~~~-- 72 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTK--MPVKEKEA----SKKEVILLAKMKHPNIVTFFASFQENG-- 72 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhh--ccchhhHH----HHHHHHHHHhCCCCChhhhhheeccCC--
Confidence 5889999999999999999984 4566777654321 11122223 378999999999999999999887654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.+ .....+++..+..++.||+.||.|||+.+++|+||||+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~ 137 (257)
T cd08225 73 ------------RLFIVMEYCDGGDLMKRINR---QRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKN 137 (257)
T ss_pred ------------eEEEEEecCCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCC
Confidence 34999999999999999875 223358999999999999999999999999999999999999876
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
. ..++|+|||.+........ ......|++.|+|||++.+ ..++.++||||||+++|+|++
T Consensus 138 ~------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~~~ape~~~~----~~~~~~~Dv~slG~il~~l~~ 197 (257)
T cd08225 138 G------MVAKLGDFGIARQLNDSME----------LAYTCVGTPYYLSPEICQN----RPYNNKTDIWSLGCVLYELCT 197 (257)
T ss_pred C------CeEEecccccchhccCCcc----------cccccCCCccccCHHHHcC----CCCCchhhHHHHHHHHHHHHh
Confidence 2 3579999999876533111 1123458899999999875 457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||...+..+....+.....+... ...+..+.+++.+||..+|++|||+.+
T Consensus 198 g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~ 250 (257)
T cd08225 198 LKHPFEGNNLHQLVLKICQGYFAPIS---------------------------PNFSRDLRSLISQLFKVSPRDRPSITS 250 (257)
T ss_pred CCCCCCCccHHHHHHHHhcccCCCCC---------------------------CCCCHHHHHHHHHHhccChhhCcCHHH
Confidence 99999876555444433322211110 134456999999999999999999999
Q ss_pred HHHHHHh
Q 001143 1125 LYEMFVA 1131 (1141)
Q Consensus 1125 lL~~L~~ 1131 (1141)
+++|+|+
T Consensus 251 ll~~~~~ 257 (257)
T cd08225 251 ILKRPFL 257 (257)
T ss_pred HhhCCCC
Confidence 9999985
No 211
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.2e-33 Score=312.76 Aligned_cols=260 Identities=26% Similarity=0.422 Sum_probs=199.3
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+.+|++.+.||+|++|.||+|.+ .+..+++|...... ........ .+.+|+.+++.++||||+++++++...+
T Consensus 1 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~-~~~~~~~~----~~~~e~~~l~~~~h~~i~~~~~~~~~~~ 75 (267)
T cd08229 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFD-LMDAKARA----DCIKEIDLLKQLNHPNVIKYYASFIEDN 75 (267)
T ss_pred CchhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehh-hhhHHHHH----HHHHHHHHHHHccCCchhhhhheeEeCC
Confidence 46789999999999999999997 45667777543221 11112222 3478999999999999999999988655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .++||||+++++|.+++..... ....+++..++.++.||+.||.|||++|++|+||||+||+++
T Consensus 76 ~--------------~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~ 140 (267)
T cd08229 76 E--------------LNIVLELADAGDLSRMIKHFKK-QKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT 140 (267)
T ss_pred e--------------EEEEEEecCCCCHHHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc
Confidence 3 4999999999999999875322 234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||++........ ......++..|+|||++.+ ..++.++||||||+++|+|
T Consensus 141 ~~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~~~ape~~~~----~~~~~~~Dv~slG~il~~l 199 (267)
T cd08229 141 AT-------GVVKLGDLGLGRFFSSKTT----------AAHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCLLYEM 199 (267)
T ss_pred CC-------CCEEECcchhhhccccCCc----------ccccccCCcCccCHHHhcC----CCccchhhHHHHHHHHHHH
Confidence 77 7899999999865432111 1123458899999999875 4577899999999999999
Q ss_pred HhCCCCCCCCCH--HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1043 LTLQVPYMGLSE--LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1043 LTGk~Pf~~~~~--~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
++|..||.+... .+....+.....+..+ ....+..+.+++.+||+.||.+||
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~~l~~~p~~Rp 253 (267)
T cd08229 200 AALQSPFYGDKMNLYSLCKKIEQCDYPPLP--------------------------SDHYSEELRQLVNMCINPDPEKRP 253 (267)
T ss_pred HhCCCCcccccchHHHHhhhhhcCCCCCCC--------------------------cccccHHHHHHHHHhcCCCcccCC
Confidence 999999975432 2222332222211111 014566799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
|+.+|++.+..
T Consensus 254 t~~~i~~~~~~ 264 (267)
T cd08229 254 DITYVYDVAKR 264 (267)
T ss_pred CHHHHHHHHhh
Confidence 99999887654
No 212
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=2.6e-33 Score=310.44 Aligned_cols=252 Identities=26% Similarity=0.362 Sum_probs=196.3
Q ss_pred CCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
-.+|++.++||+|+||.||+|.+.+ ..+++|+.. ..... .+. +.+|+.++++++||||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~--~~~~~---~~~----~~~E~~~l~~l~~~~i~~~~~~~~~~-- 73 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMS---PEA----FLQEAQVMKKLRHEKLVQLYAVVSEE-- 73 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecc--cCccC---HHH----HHHHHHHHHhCCCCCcceEEEEECCC--
Confidence 3569999999999999999998854 356666543 21111 123 37899999999999999999876432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.++++. .....+++..+..++.|++.||.|||+.+|+||||||+||+++.
T Consensus 74 -------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~ 137 (262)
T cd05071 74 -------------PIYIVTEYMSKGSLLDFLKG---EMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 137 (262)
T ss_pred -------------CcEEEEEcCCCCcHHHHHhh---ccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcC
Confidence 23899999999999999975 22345899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||.+..+...... ......++..|+|||+..+ ..++.++|||||||++|+|+
T Consensus 138 ~-------~~~~L~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~----~~~~~~~DvwslG~~l~ell 197 (262)
T cd05071 138 N-------LVCKVADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELT 197 (262)
T ss_pred C-------CcEEeccCCceeeccccccc---------cccCCcccceecCHhHhcc----CCCCchhhHHHHHHHHHHHH
Confidence 7 78999999999765432111 1112346778999998865 56789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |..||.+....+....+......... ...+..+.+++.+||+.||++||++
T Consensus 198 t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~p~~Rp~~ 250 (262)
T cd05071 198 TKGRVPYPGMVNREVLDQVERGYRMPCP---------------------------PECPESLHDLMCQCWRKEPEERPTF 250 (262)
T ss_pred cCCCCCCCCCChHHHHHHHhcCCCCCCc---------------------------cccCHHHHHHHHHHccCCcccCCCH
Confidence 9 88899876666655554333211110 1445678999999999999999999
Q ss_pred HHHHHHHH
Q 001143 1123 GDLYEMFV 1130 (1141)
Q Consensus 1123 ~ElL~~L~ 1130 (1141)
.++++.+.
T Consensus 251 ~~~~~~l~ 258 (262)
T cd05071 251 EYLQAFLE 258 (262)
T ss_pred HHHHHHHH
Confidence 99998765
No 213
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=5.1e-34 Score=319.04 Aligned_cols=250 Identities=25% Similarity=0.413 Sum_probs=193.2
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||.||+|.+ .+..+++|+..... .....+. +.+|+.++++++||||+++++++.....
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~---~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 73 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI---TVELQKQ----IMSELEILYKCDSPYIIGFYGAFFVENR 73 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC---ChHHHHH----HHHHHHHHHhCCCCCeeeEEEEEEECCE
Confidence 3688999999999999999987 45567777654321 1222233 4789999999999999999999987553
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++++|..+. .+++..+..++.|++.||.|||+.||+|+||||+||+++.
T Consensus 74 --------------~~lv~e~~~~~~l~~~~---------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~ 130 (279)
T cd06619 74 --------------ISICTEFMDGGSLDVYR---------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNT 130 (279)
T ss_pred --------------EEEEEecCCCCChHHhh---------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECC
Confidence 48999999999986542 4788899999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||++....... .....||..|+|||++.+ ..++.++|||||||++|+|+
T Consensus 131 ~-------~~~~l~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~~l~ 187 (279)
T cd06619 131 R-------GQVKLCDFGVSTQLVNSI------------AKTYVGTNAYMAPERISG----EQYGIHSDVWSLGISFMELA 187 (279)
T ss_pred C-------CCEEEeeCCcceeccccc------------ccCCCCChhhcCceeecC----CCCCCcchHHHHHHHHHHHH
Confidence 7 789999999986543211 123468999999999876 45789999999999999999
Q ss_pred hCCCCCCCCCHH-------HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1044 TLQVPYMGLSEL-------EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1044 TGk~Pf~~~~~~-------el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+|+.||...... .....+.....+.. .....+.++.+++.+||+.||
T Consensus 188 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~~P 241 (279)
T cd06619 188 LGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVL--------------------------PVGQFSEKFVHFITQCMRKQP 241 (279)
T ss_pred hCCCCchhhcccccccchHHHHHHHhccCCCCC--------------------------CCCcCCHHHHHHHHHHhhCCh
Confidence 999999642211 11111111110000 001345678999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001143 1117 TERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~ 1134 (1141)
++||++.++++|+|+...
T Consensus 242 ~~Rp~~~eil~~~~~~~~ 259 (279)
T cd06619 242 KERPAPENLMDHPFIVQY 259 (279)
T ss_pred hhCCCHHHHhcCcccccc
Confidence 999999999999998754
No 214
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.9e-34 Score=332.60 Aligned_cols=270 Identities=19% Similarity=0.223 Sum_probs=190.0
Q ss_pred CCceEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|++.+. .+|+|+. ... . ...|+.++++++||||+++++++.....
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~--~~~--------~----~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 131 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIG--QKG--------T----TLIEAMLLQNVNHPSVIRMKDTLVSGAI 131 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeC--Ccc--------c----cHHHHHHHHhCCCCCCcChhheEEeCCe
Confidence 4699999999999999999998654 5666642 110 1 1469999999999999999999886553
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+. ++|.+++.. ....+++..+..|+.||+.||.|||++||+||||||+|||++.
T Consensus 132 --------------~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~ 192 (357)
T PHA03209 132 --------------TCMVLPHYS-SDLYTYLTK----RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIND 192 (357)
T ss_pred --------------eEEEEEccC-CcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECC
Confidence 499999996 788888864 2346999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.+....... ......||+.|+|||++.+ ..++.++|||||||++|||+
T Consensus 193 ~-------~~~kl~DfG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlGvvl~ell 250 (357)
T PHA03209 193 V-------DQVCIGDLGAAQFPVVAP-----------AFLGLAGTVETNAPEVLAR----DKYNSKADIWSAGIVLFEML 250 (357)
T ss_pred C-------CCEEEecCccccccccCc-----------ccccccccccccCCeecCC----CCCCchhhHHHHHHHHHHHH
Confidence 7 789999999986432111 1113458999999999876 56889999999999999999
Q ss_pred hCCCCC-CCCCH----------HHHHHHHHhCC-CC-CchhHHhhhccCccccccc----cCCCCCC--chhhhhhHHHH
Q 001143 1044 TLQVPY-MGLSE----------LEIHDLIQMGK-RP-RLTDELEALGSCHEHEVAQ----SGSGFEK--PEAELETLSFL 1104 (1141)
Q Consensus 1044 TGk~Pf-~~~~~----------~el~~~I~~~~-~p-~l~~~l~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~L 1104 (1141)
++..|+ ..... ..+...+.... .+ .++... . ......+.. ....... .......+.++
T Consensus 251 ~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (357)
T PHA03209 251 AYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDP--G-SRLVRGFIEYASLERQPYTRYPCFQRVNLPIDG 327 (357)
T ss_pred HcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCC--c-cHHHHHHHhhcccCCCcccccHHHhccCCCchH
Confidence 865544 32111 11122221111 11 000000 0 000000000 0000000 00011345667
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1105 VDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1105 ~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.++|.+||+.||.+||||.|+++|+||+.
T Consensus 328 ~~li~~mL~~dP~~Rpta~e~l~hp~f~~ 356 (357)
T PHA03209 328 EFLVHKMLTFDAAMRPSAEEILNYPMFAQ 356 (357)
T ss_pred HHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence 88999999999999999999999999974
No 215
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.6e-33 Score=309.26 Aligned_cols=260 Identities=27% Similarity=0.408 Sum_probs=201.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|.+. +..+++|..+..... .....+. +.+|+.++++++|+||+++++++....
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~----~~~ei~~l~~~~~~~i~~~~~~~~~~~- 75 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMM-DAKARQD----CLKEIDLLKQLDHPNVIKYLASFIENN- 75 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeeccccc-chhhHHH----HHHHHHHHHhCCCCCeeeeeeeeecCC-
Confidence 57999999999999999999984 667788765432211 1122233 479999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++..... ....+++..+..++.||+.||.|||+.||+||||+|+||+++.
T Consensus 76 -------------~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~ 141 (267)
T cd08224 76 -------------ELNIVLELADAGDLSRMIKHFKK-QKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITA 141 (267)
T ss_pred -------------eEEEEEecCCCCCHHHHHHHhcc-cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECC
Confidence 34999999999999999976432 2346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||.+........ ......+++.|+|||.+.+ ..++.++|||||||++|+|+
T Consensus 142 ~-------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~y~apE~~~~----~~~~~~~Di~slG~il~~l~ 200 (267)
T cd08224 142 T-------GVVKLGDLGLGRFFSSKTT----------AAHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCLLYEMA 200 (267)
T ss_pred C-------CcEEEeccceeeeccCCCc----------ccceecCCccccCHHHhcc----CCCCchhcHHHHHHHHHHHH
Confidence 7 7899999999875433111 1112357889999999875 55788999999999999999
Q ss_pred hCCCCCCCCC--HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1044 TLQVPYMGLS--ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1044 TGk~Pf~~~~--~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
+|+.||.... ..+..+.+..+..+..+. ...+..+.+++.+||..+|.+|||
T Consensus 201 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~i~~cl~~~p~~Rp~ 254 (267)
T cd08224 201 ALQSPFYGDKMNLYSLCKKIEKCDYPPLPA--------------------------DHYSEELRDLVSRCINPDPEKRPD 254 (267)
T ss_pred HCCCCcccCCccHHHHHhhhhcCCCCCCCh--------------------------hhcCHHHHHHHHHHcCCCcccCCC
Confidence 9999996532 222333333222221110 134557899999999999999999
Q ss_pred HHHHHHHHHhh
Q 001143 1122 AGDLYEMFVAR 1132 (1141)
Q Consensus 1122 a~ElL~~L~~~ 1132 (1141)
+.+|++.+...
T Consensus 255 ~~~il~~~~~~ 265 (267)
T cd08224 255 ISYVLQVAKEM 265 (267)
T ss_pred HHHHHHHHHHh
Confidence 99999987654
No 216
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.5e-34 Score=338.93 Aligned_cols=274 Identities=19% Similarity=0.267 Sum_probs=195.5
Q ss_pred CCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
-..|.+.+.||+|+||.||+|.+.. ..|++|.. .. .. +.+|++++++++|||||++++++...+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~--~~--------~~----~~~E~~iL~~L~HpnIv~l~~~~~~~~ 233 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAG--WY--------AS----SVHEARLLRRLSHPAVLALLDVRVVGG 233 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecc--cc--------cC----HHHHHHHHHHCCCCCCCcEEEEEEECC
Confidence 3469999999999999999999864 44555531 10 11 258999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++|||++. ++|.+++.. ....+++..++.|+.||+.||.|||++||+||||||+|||++
T Consensus 234 --------------~~~lv~e~~~-~~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~ 294 (461)
T PHA03211 234 --------------LTCLVLPKYR-SDLYTYLGA----RLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN 294 (461)
T ss_pred --------------EEEEEEEccC-CCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC
Confidence 3499999995 799888864 123699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 295 ~~-------~~vkL~DFGla~~~~~~~~~--------~~~~~~~GT~~Y~APE~~~~----~~~~~~sDvwSlGviL~El 355 (461)
T PHA03211 295 GP-------EDICLGDFGAACFARGSWST--------PFHYGIAGTVDTNAPEVLAG----DPYTPSVDIWSAGLVIFEA 355 (461)
T ss_pred CC-------CCEEEcccCCceeccccccc--------ccccccCCCcCCcCHHHHcC----CCCCchHHHHHHHHHHHHH
Confidence 77 78999999999765321111 11123469999999999976 5688999999999999999
Q ss_pred HhCCCCCCCC--------CHHHHHHHHHhCCCC--Cchh----HH-hhhccCccccccccCCCCCCchh--hhhhHHHHH
Q 001143 1043 LTLQVPYMGL--------SELEIHDLIQMGKRP--RLTD----EL-EALGSCHEHEVAQSGSGFEKPEA--ELETLSFLV 1105 (1141)
Q Consensus 1043 LTGk~Pf~~~--------~~~el~~~I~~~~~p--~l~~----~l-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~L~ 1105 (1141)
++|..|+... ...++...+...... .++. .+ ..... ............+.+ ....+..+.
T Consensus 356 ~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (461)
T PHA03211 356 AVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHAGSRLVSQYRH---RAARNRRPAYTRPAWTRYYKLDLDVE 432 (461)
T ss_pred HHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCcchHHHHHHHh---hhhcccCCccCCcchhhhccccchHH
Confidence 9987655321 123344444332221 1100 00 00000 000000000001111 113345789
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1106 DVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1106 dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
+||.+||+.||.+|||+.|+|+|+||..
T Consensus 433 dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 433 YLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred HHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 9999999999999999999999999964
No 217
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.4e-33 Score=317.40 Aligned_cols=254 Identities=26% Similarity=0.358 Sum_probs=203.2
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|++|.||+|.+. +..+++|+...... ..... ...+.+|++++++++||||+++++++.+..
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~- 74 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI-VKLKQ----VEHVLNEKRILQSIRHPFLVNLYGSFQDDS- 74 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh-hhhhH----HHHHHHHHHHHHhCCCCCccceeeEEEcCC-
Confidence 46899999999999999999984 56677776542211 01111 233479999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||+|+||+++.
T Consensus 75 -------------~~~~v~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~ 136 (290)
T cd05580 75 -------------NLYLVMEYVPGGELFSHLRK-----SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDS 136 (290)
T ss_pred -------------eEEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECC
Confidence 34999999999999999976 246899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++...... .....+++.|+|||.+.+ ..++.++||||||+++|+|+
T Consensus 137 ~-------~~~kl~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 192 (290)
T cd05580 137 D-------GYIKITDFGFAKRVKGR-------------TYTLCGTPEYLAPEIILS----KGYGKAVDWWALGILIYEML 192 (290)
T ss_pred C-------CCEEEeeCCCccccCCC-------------CCCCCCCccccChhhhcC----CCCCccccHHHHHHHHHHHH
Confidence 7 78999999998764321 113358899999999875 45678999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC---
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP--- 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP--- 1120 (1141)
+|+.||......+....+..+.. .++. ..+..+.+++.+||..||.+|+
T Consensus 193 ~g~~p~~~~~~~~~~~~~~~~~~-~~~~---------------------------~~~~~l~~li~~~l~~~p~~R~~~~ 244 (290)
T cd05580 193 AGYPPFFDDNPIQIYEKILEGKV-RFPS---------------------------FFSPDAKDLIRNLLQVDLTKRLGNL 244 (290)
T ss_pred hCCCCCCCCCHHHHHHHHhcCCc-cCCc---------------------------cCCHHHHHHHHHHccCCHHHccCcc
Confidence 99999987665555555443221 1110 2345689999999999999999
Q ss_pred --CHHHHHHHHHhhcCC
Q 001143 1121 --TAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1121 --Sa~ElL~~L~~~~~s 1135 (1141)
+++|+++|+|+....
T Consensus 245 ~~~~~~l~~~~~~~~~~ 261 (290)
T cd05580 245 KNGVNDIKNHPWFAGID 261 (290)
T ss_pred cCCHHHHHcCcccccCC
Confidence 999999999986543
No 218
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.7e-33 Score=319.58 Aligned_cols=288 Identities=21% Similarity=0.226 Sum_probs=207.9
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
++++|++.+.||+|+||.||+|.+. +..+|+|+.+.+.... ... ..+.+|+.++++++|+||+++++++...
T Consensus 5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~--~~~----~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 78 (309)
T cd07845 5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD--GIP----ISSLREITLLLNLRHPNIVELKEVVVGK 78 (309)
T ss_pred cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCC--CCc----chhhHHHHHHHhCCCCCCcceEEEEecC
Confidence 5778999999999999999999984 6678888765442211 111 1225799999999999999999998753
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. ...++||||+. ++|.+++... ...+++..+..++.||+.||.|||+.|++||||||+||++
T Consensus 79 ~~------------~~~~lv~e~~~-~~l~~~l~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~ 141 (309)
T cd07845 79 HL------------DSIFLVMEYCE-QDLASLLDNM----PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLL 141 (309)
T ss_pred CC------------CeEEEEEecCC-CCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 21 24599999997 6898888752 2468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||.+........ ......+++.|+|||.+.+ ...++.++|||||||++|+
T Consensus 142 ~~~-------~~~kL~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DvwslG~il~e 201 (309)
T cd07845 142 TDK-------GCLKIADFGLARTYGLPAK----------PMTPKVVTLWYRAPELLLG---CTTYTTAIDMWAVGCILAE 201 (309)
T ss_pred CCC-------CCEEECccceeeecCCccC----------CCCcccccccccChhhhcC---CCCcCchHHHHHHHHHHHH
Confidence 887 7899999999876543211 1112245788999999865 2356789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcc-ccccccCCCCCC-chhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE-HEVAQSGSGFEK-PEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|++|+.||.+.+..+....+...........+........ ..+......... .......++.+.++|.+||++||++|
T Consensus 202 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R 281 (309)
T cd07845 202 LLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKR 281 (309)
T ss_pred HHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhC
Confidence 9999999988777776665543222211111111000000 000000000000 00011246778999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
||+.+++.|+|+...
T Consensus 282 ~t~~~il~h~~f~~~ 296 (309)
T cd07845 282 ATAEEALESSYFKEK 296 (309)
T ss_pred cCHHHHhcChhhccC
Confidence 999999999999743
No 219
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=2.2e-33 Score=325.37 Aligned_cols=285 Identities=17% Similarity=0.209 Sum_probs=203.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||.||+|.+. +..+|+|+.. ...........+ .+|+.++++++||||+++++++....
T Consensus 15 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 88 (353)
T cd07850 15 LKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLS--RPFQNVTHAKRA----YRELVLMKLVNHKNIIGLLNVFTPQK 88 (353)
T ss_pred hcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecC--ccccChhHHHHH----HHHHHHHHhcCCCCCcceeeeeccCC
Confidence 567999999999999999999974 5566777542 222222222233 68999999999999999999987543
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.+ ......|+||||+. ++|.+.+.. .++...+..++.||+.||+|||++||+||||||+||+++
T Consensus 89 ~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~ 152 (353)
T cd07850 89 SL--------EEFQDVYLVMELMD-ANLCQVIQM-------DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 152 (353)
T ss_pred Cc--------cccCcEEEEEeccC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC
Confidence 22 12235699999996 688888764 388999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||.+....... ......++..|+|||++.+ ..++.++|||||||++|+|
T Consensus 153 ~~-------~~~kL~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~~l 210 (353)
T cd07850 153 SD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGEM 210 (353)
T ss_pred CC-------CCEEEccCccceeCCCCC-----------CCCCCcccccccCHHHHhC----CCCCCchhhHhHHHHHHHH
Confidence 87 789999999997643311 1112357889999999876 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCc-----------cccccccCCCC----CCchhhhhhHHHHHHH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH-----------EHEVAQSGSGF----EKPEAELETLSFLVDV 1107 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~-----------~~~~~~~~~~~----~~~~~~~~~~~~L~dL 1107 (1141)
++|+.||...+.......+................... ...+.+..... .........+..++++
T Consensus 211 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 290 (353)
T cd07850 211 IRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDL 290 (353)
T ss_pred HHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHH
Confidence 99999998776655444442211111111111100000 00000000000 0000011346678999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
+.+||+.||++|||+.|+++|+|+..
T Consensus 291 i~~~L~~dP~~R~t~~eiL~~~~~~~ 316 (353)
T cd07850 291 LSKMLVIDPEKRISVDDALQHPYINV 316 (353)
T ss_pred HHHHcCCChhhCcCHHHHhcChhHhh
Confidence 99999999999999999999999863
No 220
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=2e-33 Score=312.15 Aligned_cols=260 Identities=23% Similarity=0.326 Sum_probs=187.4
Q ss_pred eeecccCceEEEEEEECC----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGS----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
+.||+|+||.||+|.+.+ ..+++|. ++.... ...... +.+|+.++++++||||+++++++.+...
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~--~~~~~~-~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~~---- 69 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKE--LRVSAS-VQEQMK----FLEEAQPYRSLQHSNLLQCLGQCTEVTP---- 69 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEe--cCCCCC-hHHHHH----HHHHHHHHHhCCCCCEeeEEEEEcCCCC----
Confidence 468999999999998643 2345554 332221 122223 4789999999999999999999876543
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 967 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~ 967 (1141)
.++||||+++++|.++++.........+++..+..++.|++.||.|||+++++||||||+||+++.+
T Consensus 70 ----------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~--- 136 (269)
T cd05087 70 ----------YLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTAD--- 136 (269)
T ss_pred ----------cEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCC---
Confidence 3999999999999999976433333457788889999999999999999999999999999999887
Q ss_pred CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC---CCCCCchhhHHHHHHHHHHHHh
Q 001143 968 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK---PNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 968 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||.+......... .......++..|+|||++.+... ...++.++||||||+++|||++
T Consensus 137 ----~~~kL~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~ 204 (269)
T cd05087 137 ----LTVKIGDYGLSHNKYKEDYY--------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFE 204 (269)
T ss_pred ----CcEEECCccccccccCccee--------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHh
Confidence 78999999998643221110 01123357788999999864211 1235789999999999999996
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 -Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|..||......+.............. .+......++.+.+++..|| .+|++|||++
T Consensus 205 ~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~ 261 (269)
T cd05087 205 LGSQPYRHLSDEQVLTYTVREQQLKLP----------------------KPRLKLPLSDRWYEVMQFCW-LQPEQRPSAE 261 (269)
T ss_pred CCCCCCCCCChHHHHHHHhhcccCCCC----------------------CCccCCCCChHHHHHHHHHh-cCcccCCCHH
Confidence 99999876555443332221111111 01111134556889999999 6899999999
Q ss_pred HHHHHHH
Q 001143 1124 DLYEMFV 1130 (1141)
Q Consensus 1124 ElL~~L~ 1130 (1141)
||+..|.
T Consensus 262 ~l~~~l~ 268 (269)
T cd05087 262 EVHLLLS 268 (269)
T ss_pred HHHHHhc
Confidence 9998753
No 221
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=1.4e-33 Score=317.08 Aligned_cols=266 Identities=21% Similarity=0.306 Sum_probs=198.8
Q ss_pred CCCceEeeeecccCceEEEEEEECC------------------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS------------------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL 866 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~------------------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L 866 (1141)
..+|++.++||+|+||.||+|.+.. ..+++|+..... .....+. +.+|+++++++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~---~~~~~~~----~~~e~~~l~~l 76 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA---SDNARED----FLKEVKILSRL 76 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc---CHHHHHH----HHHHHHHHHhc
Confidence 4579999999999999999998643 235666543221 1222333 47899999999
Q ss_pred CCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc------CCCCCCHHHHHHHHHHHHHH
Q 001143 867 RHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------GEKHVSVKLALFIAQDVAAA 940 (1141)
Q Consensus 867 ~HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~------~~~~Ls~~~i~~Ia~QIa~g 940 (1141)
+||||+++++++..+.. .++||||+++++|.+++...... ....+++..++.++.|++.|
T Consensus 77 ~~~~i~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~a 142 (296)
T cd05051 77 SDPNIARLLGVCTVDPP--------------LCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASG 142 (296)
T ss_pred CCCCEeEEEEEEecCCC--------------cEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHH
Confidence 99999999999876543 39999999999999999764311 12368999999999999999
Q ss_pred HHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccc
Q 001143 941 LVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAM 1020 (1141)
Q Consensus 941 L~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 1020 (1141)
|.|||++||+||||||+||+++.+ +.++|+|||.+......... .......+++.|+|||++.+
T Consensus 143 l~~LH~~~i~H~dlkp~Nili~~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~- 206 (296)
T cd05051 143 MRYLESLNFVHRDLATRNCLVGKN-------YTIKIADFGMSRNLYSSDYY--------RVQGRAPLPIRWMAWESVLL- 206 (296)
T ss_pred HHHHHHcCccccccchhceeecCC-------CceEEccccceeecccCcce--------eecCcCCCCceecCHHHhhc-
Confidence 999999999999999999999887 78999999998754322110 01123346788999999876
Q ss_pred cCCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhh
Q 001143 1021 HKPNLYGLEVDIWSYGCLLLELLT--LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAEL 1098 (1141)
Q Consensus 1021 ~~~~~~s~ksDVWSLGviL~ELLT--Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1141)
..++.++|||||||++|||++ +..||......+....+......... .... ....
T Consensus 207 ---~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~-~~~~ 263 (296)
T cd05051 207 ---GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGR-------------------QIYL-PRPP 263 (296)
T ss_pred ---CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccc-------------------cccC-CCcc
Confidence 467899999999999999998 77888766655554443221100000 0000 0011
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 001143 1099 ETLSFLVDVFRRCTEENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1099 ~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~ 1130 (1141)
..+.++.+++.+||+.||.+|||+.||++.|.
T Consensus 264 ~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 264 NCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred CCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 34567999999999999999999999998764
No 222
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=6.5e-34 Score=317.38 Aligned_cols=252 Identities=28% Similarity=0.423 Sum_probs=197.9
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|+..+.||+|+||.||+|.+. +..+++|+..... .....+ .+.+|+.++++++||||+++++++....
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 75 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE---AEDEIE----DIQQEITVLSQCDSPYITRYYGSYLKGT-- 75 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc---chHHHH----HHHHHHHHHHcCCCCccHhhhcccccCC--
Confidence 4778899999999999999874 4567777643221 112223 3479999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.. ..+++..+..++.||+.|+.|||++|++|+||+|+||+++.+
T Consensus 76 ------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~ 137 (277)
T cd06642 76 ------------KLWIIMEYLGGGSALDLLKP------GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQ 137 (277)
T ss_pred ------------ceEEEEEccCCCcHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCC
Confidence 34999999999999998864 368999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||++..+..... ......++..|+|||++.+ ..++.++|||||||++|+|++
T Consensus 138 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~t 196 (277)
T cd06642 138 -------GDVKLADFGVAGQLTDTQI----------KRNTFVGTPFWMAPEVIKQ----SAYDFKADIWSLGITAIELAK 196 (277)
T ss_pred -------CCEEEccccccccccCcch----------hhhcccCcccccCHHHhCc----CCCchhhhHHHHHHHHHHHHh
Confidence 7899999999876543111 1112357889999999876 457889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||...........+.....+.+ ....+..+.+++.+||+.+|.+||++.+
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (277)
T cd06642 197 GEPPNSDLHPMRVLFLIPKNSPPTL---------------------------EGQYSKPFKEFVEACLNKDPRFRPTAKE 249 (277)
T ss_pred CCCCCcccchhhHHhhhhcCCCCCC---------------------------CcccCHHHHHHHHHHccCCcccCcCHHH
Confidence 9999976544443333222211111 1134567899999999999999999999
Q ss_pred HHHHHHhhc
Q 001143 1125 LYEMFVART 1133 (1141)
Q Consensus 1125 lL~~L~~~~ 1133 (1141)
+++|+|+..
T Consensus 250 il~~~~~~~ 258 (277)
T cd06642 250 LLKHKFITR 258 (277)
T ss_pred HHHhHHHHH
Confidence 999999863
No 223
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=7.3e-34 Score=314.20 Aligned_cols=266 Identities=27% Similarity=0.383 Sum_probs=200.1
Q ss_pred CceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|+..+.||+|++|.||+|.. .+..+++|+...... ...........+.+|+.++++++||||+++++++.+.+
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~--~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-- 76 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRN--TSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS-- 76 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccC--CchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC--
Confidence 478889999999999999987 566788887543321 11122222344589999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
+.++||||+++++|.+++.+ ..++++..+..++.||+.||.|||++|++|+||+|+||+++.+
T Consensus 77 ------------~~~~v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~ 139 (268)
T cd06630 77 ------------HFNLFVEWMAGGSVSHLLSK-----YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDST 139 (268)
T ss_pred ------------eEEEEEeccCCCcHHHHHHH-----hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 34999999999999999976 2468999999999999999999999999999999999999765
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+ ..+||+|||.+..+...... .........++..|+|||.+.+ ..++.++||||+|+++|+|++
T Consensus 140 ~------~~~~l~dfg~~~~~~~~~~~------~~~~~~~~~~~~~~~~PE~~~~----~~~~~~~Dv~slG~~l~~l~~ 203 (268)
T cd06630 140 G------QRLRIADFGAAARLAAKGTG------AGEFQGQLLGTIAFMAPEVLRG----EQYGRSCDVWSVGCVIIEMAT 203 (268)
T ss_pred C------CEEEEccccccccccccccc------CCccccccccccceeCHhHhcc----CCCCcccchHHHHHHHHHHHh
Confidence 2 36999999998765432111 0011223458899999999875 457889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|..||...........+...... ...+......++++.+++.+||..+|.+||++.+
T Consensus 204 g~~p~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ 260 (268)
T cd06630 204 AKPPWNAEKHSNHLALIFKIASA-----------------------TTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRE 260 (268)
T ss_pred CCCCCCCCCCcchHHHHHHHhcc-----------------------CCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHH
Confidence 99999653322211111100000 0001111145567999999999999999999999
Q ss_pred HHHHHHhh
Q 001143 1125 LYEMFVAR 1132 (1141)
Q Consensus 1125 lL~~L~~~ 1132 (1141)
+++|+|++
T Consensus 261 ll~~~~~~ 268 (268)
T cd06630 261 LLKHPVFR 268 (268)
T ss_pred HhcCcccC
Confidence 99999874
No 224
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=8.1e-34 Score=317.18 Aligned_cols=279 Identities=20% Similarity=0.264 Sum_probs=198.5
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||.|++|.||+|++. +..+++|....+. ....... .+.+|++++++++||||+++++++.+...
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~~~- 73 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEGVPS----TAIREISLLKELNHPNIVKLLDVIHTENK- 73 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccc--cccccch----HHHHHHHHHHhcCCCCCcchhhhcccCCc-
Confidence 4889999999999999999984 5567777644322 1111112 33789999999999999999999876543
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.++||||+. ++|.+++.. .....+++..+..++.||+.||+|||+++++||||+|+||+++.+
T Consensus 74 -------------~~~v~e~~~-~~l~~~~~~---~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~ 136 (284)
T cd07860 74 -------------LYLVFEFLH-QDLKKFMDA---SPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTE 136 (284)
T ss_pred -------------EEEEeeccc-cCHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC
Confidence 499999996 689998865 233468999999999999999999999999999999999999987
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||.+......... .....+++.|+|||++.+ ...++.++|||||||++|+|+|
T Consensus 137 -------~~~~l~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~il~~l~t 196 (284)
T cd07860 137 -------GAIKLADFGLARAFGVPVRT----------YTHEVVTLWYRAPEILLG---CKYYSTAVDIWSLGCIFAEMVT 196 (284)
T ss_pred -------CCEEEeeccchhhcccCccc----------cccccccccccCCeEEec---CCCCCcHHHHHHHHHHHHHHHH
Confidence 78999999998654321111 112346888999998765 2345789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccC--ccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1045 LQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSC--HEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|+.||.+.+..+....+ .....+. ...++..... ....+... ............+..+.++|.+||+.||.+|||
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 274 (284)
T cd07860 197 RRALFPGDSEIDQLFRIFRTLGTPD-EVVWPGVTSLPDYKPSFPKW-ARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRIS 274 (284)
T ss_pred CCCCCCCCCHHHHHHHHHHHhCCCC-hhhhhhhhHHHHHHhhcccc-cccCHHHHcccCCHHHHHHHHHhcCCCcccCCC
Confidence 99999876654433333 3222221 1100000000 00000000 000000011134567899999999999999999
Q ss_pred HHHHHHHHHh
Q 001143 1122 AGDLYEMFVA 1131 (1141)
Q Consensus 1122 a~ElL~~L~~ 1131 (1141)
+.++++|+||
T Consensus 275 ~~~~l~~~~f 284 (284)
T cd07860 275 AKAALAHPFF 284 (284)
T ss_pred HHHHhcCCCC
Confidence 9999999986
No 225
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.8e-33 Score=310.58 Aligned_cols=259 Identities=22% Similarity=0.366 Sum_probs=198.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~---~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
..+|++.+.||+|+||.||+|.+. +..+.++++.++... .....+.+ .+|+.++++++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~ 77 (267)
T cd05066 3 ASCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDF----LSEASIMGQFDHPNIIHLEGVVTKS 77 (267)
T ss_pred HHHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHH----HHHHHHHHhCCCCCcceEEEEEecC
Confidence 457899999999999999999873 232333343343322 22223333 7899999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+. .++||||+++++|.+++.. . ...+++.++..++.||+.||.|||+++++||||||+||++
T Consensus 78 ~~--------------~~lv~e~~~~~~L~~~~~~---~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili 139 (267)
T cd05066 78 KP--------------VMIVTEYMENGSLDAFLRK---H-DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV 139 (267)
T ss_pred Cc--------------cEEEEEcCCCCCHHHHHHh---c-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE
Confidence 53 3999999999999999975 1 2368999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.++|+|||.+..+....... .......++..|+|||++.+ ..++.++|||||||++|+
T Consensus 140 ~~~-------~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~~pe~~~~----~~~~~~~Dv~slG~~l~e 201 (267)
T cd05066 140 NSN-------LVCKVSDFGLSRVLEDDPEAA-------YTTRGGKIPIRWTAPEAIAY----RKFTSASDVWSYGIVMWE 201 (267)
T ss_pred CCC-------CeEEeCCCCccccccccccee-------eecCCCccceeecCHhHhcc----CccCchhhhHHHHHHHHH
Confidence 877 789999999997654321110 00111223568999999876 467899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+++ |..||......+....+..+..+... ...+..+.+++.+||+.+|.+||
T Consensus 202 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp 254 (267)
T cd05066 202 VMSYGERPYWEMSNQDVIKAIEEGYRLPAP---------------------------MDCPAALHQLMLDCWQKDRNERP 254 (267)
T ss_pred HhcCCCCCcccCCHHHHHHHHhCCCcCCCC---------------------------CCCCHHHHHHHHHHcccCchhCC
Confidence 887 99999876666655555433221110 13456789999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
++.++++.+..
T Consensus 255 ~~~~i~~~l~~ 265 (267)
T cd05066 255 KFEQIVSILDK 265 (267)
T ss_pred CHHHHHHHHHh
Confidence 99999987653
No 226
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.4e-33 Score=307.25 Aligned_cols=251 Identities=27% Similarity=0.429 Sum_probs=198.3
Q ss_pred eeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~-----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
+.||+|+||.||+|.+. +..+++|+.... ... ...+. +.+|+.++..++|+||+++++++.....
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~--~~~-~~~~~----~~~e~~~l~~~~~~~i~~~~~~~~~~~~--- 70 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKED--ASE-EERKD----FLKEARVMKKLGHPNVVRLLGVCTEEEP--- 70 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccc--cch-hHHHH----HHHHHHHHhhcCCCChheeeeeecCCCc---
Confidence 47999999999999985 556777765422 111 12333 3799999999999999999999876443
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET----GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~----~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.++||||+++++|.+++...... ....+++..+..++.|++.||+|||++||+||||||+||+++
T Consensus 71 -----------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~ 139 (262)
T cd00192 71 -----------LYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG 139 (262)
T ss_pred -----------eEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC
Confidence 49999999999999999862111 025799999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||.+......... .......+++.|+|||.+.. ..++.++||||+|+++|+|
T Consensus 140 ~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 200 (262)
T cd00192 140 ED-------LVVKISDFGLSRDVYDDDYY--------RKKTGGKLPIRWMAPESLKD----GIFTSKSDVWSFGVLLWEI 200 (262)
T ss_pred CC-------CcEEEccccccccccccccc--------ccccCCCcCccccCHHHhcc----CCcchhhccHHHHHHHHHH
Confidence 87 78999999999765432210 11123457889999999876 4678999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |..||......+....+..+.....+ ...+.++.+++.+||+.||.+|||
T Consensus 201 ~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rps 253 (262)
T cd00192 201 FTLGATPYPGLSNEEVLEYLRKGYRLPKP---------------------------EYCPDELYELMLSCWQLDPEDRPT 253 (262)
T ss_pred HhcCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------ccCChHHHHHHHHHccCCcccCcC
Confidence 99 69999887776666666543222111 134567999999999999999999
Q ss_pred HHHHHHHH
Q 001143 1122 AGDLYEMF 1129 (1141)
Q Consensus 1122 a~ElL~~L 1129 (1141)
+.|+++++
T Consensus 254 ~~~l~~~l 261 (262)
T cd00192 254 FSELVERL 261 (262)
T ss_pred HHHHHHhh
Confidence 99999986
No 227
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.3e-33 Score=320.83 Aligned_cols=284 Identities=19% Similarity=0.258 Sum_probs=188.4
Q ss_pred eeeecccCceEEEEEEECC----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 811 CDEAGKSVSSSLFRCKFGS----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 811 ~~~LG~GsfG~Vy~a~~~~----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
..+||+|+||.||+|++.. ..+|+|.. ..... ... +.+|+.++++++||||+++++++.....
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~--~~~~~----~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~--- 72 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQI--EGTGI----SMS----ACREIALLRELKHPNVIALQKVFLSHSD--- 72 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEe--cCCCC----cHH----HHHHHHHHHhCCCCCeeeEEEEEeccCC---
Confidence 3689999999999999642 44666653 32111 112 3689999999999999999999864321
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhh----cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE----TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~----~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
...++||||++ ++|.+++..... .....+++..++.++.||+.||.|||++||+||||||+|||+.
T Consensus 73 ---------~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~ 142 (317)
T cd07867 73 ---------RKVWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVM 142 (317)
T ss_pred ---------CeEEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEc
Confidence 24699999997 688888753211 1123588999999999999999999999999999999999995
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+. ...+.+||+|||+++........ ........||+.|+|||++.+ ...++.++|||||||++|||
T Consensus 143 ~~~---~~~~~~kl~DfG~a~~~~~~~~~-------~~~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~el 209 (317)
T cd07867 143 GEG---PERGRVKIADMGFARLFNSPLKP-------LADLDPVVVTFWYRAPELLLG---ARHYTKAIDIWAIGCIFAEL 209 (317)
T ss_pred cCC---CCCCcEEEeeccceeccCCCccc-------ccccCcceecccccCcHHhcC---CCccCcHHHHHhHHHHHHHH
Confidence 331 12268999999999765432111 011223468999999999875 23578999999999999999
Q ss_pred HhCCCCCCCCCH----------HHHHHHHHhCCCCCchhHHhhhccCccc-cccc--cCCCCCC-------chhhhhhHH
Q 001143 1043 LTLQVPYMGLSE----------LEIHDLIQMGKRPRLTDELEALGSCHEH-EVAQ--SGSGFEK-------PEAELETLS 1102 (1141)
Q Consensus 1043 LTGk~Pf~~~~~----------~el~~~I~~~~~p~l~~~l~~~~~~~~~-~~~~--~~~~~~~-------~~~~~~~~~ 1102 (1141)
+||++||..... .+....+.....+.. ..+......... .... ....... +........
T Consensus 210 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (317)
T cd07867 210 LTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPAD-KDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDS 288 (317)
T ss_pred HhCCCCcccccccccccccccHHHHHHHHHhcCCCCh-hhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCCh
Confidence 999999964321 111111111111111 011100000000 0000 0000000 000112345
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1103 FLVDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1103 ~L~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
.+.+|+.+||+.||.+|||+.|+++|+||
T Consensus 289 ~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 289 KVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred HHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 68899999999999999999999999986
No 228
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.9e-33 Score=313.83 Aligned_cols=253 Identities=28% Similarity=0.410 Sum_probs=201.7
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|+..++||.|+||.||+|.+. +..+++|+..... ....... +.+|+.+++++.||||+++++++.+..
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 75 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE---AEDEIED----IQQEITVLSQCDSPYVTKYYGSYLKGT-- 75 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc---cHHHHHH----HHHHHHHHHhCCCCCEeeEEEEEEECC--
Confidence 4788899999999999999874 5667777754321 1222333 378999999999999999999988654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.. .++++..+..++.|++.||+|||+.+++|+||+|+||+++.+
T Consensus 76 ------------~~~lv~e~~~~~~L~~~i~~------~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~ 137 (277)
T cd06640 76 ------------KLWIIMEYLGGGSALDLLRA------GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQ 137 (277)
T ss_pred ------------EEEEEEecCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCC
Confidence 34999999999999999864 358899999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||++........ ......++..|+|||++.+ ..++.++|||||||++|+|++
T Consensus 138 -------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~apE~~~~----~~~~~~~Dv~slG~il~el~t 196 (277)
T cd06640 138 -------GDVKLADFGVAGQLTDTQI----------KRNTFVGTPFWMAPEVIQQ----SAYDSKADIWSLGITAIELAK 196 (277)
T ss_pred -------CCEEEcccccceeccCCcc----------ccccccCcccccCHhHhcc----CCCccHHHHHHHHHHHHHHHH
Confidence 7899999999865433110 1112357889999999875 457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||...........+.....+... ...+..+.+++.+||+.+|.+||++.+
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (277)
T cd06640 197 GEPPNSDMHPMRVLFLIPKNNPPTLT---------------------------GEFSKPFKEFIDACLNKDPSFRPTAKE 249 (277)
T ss_pred CCCCCCCcChHhHhhhhhcCCCCCCc---------------------------hhhhHHHHHHHHHHcccCcccCcCHHH
Confidence 99999876655444433222222111 145667899999999999999999999
Q ss_pred HHHHHHhhcC
Q 001143 1125 LYEMFVARTS 1134 (1141)
Q Consensus 1125 lL~~L~~~~~ 1134 (1141)
+++|+|+...
T Consensus 250 il~~~~~~~~ 259 (277)
T cd06640 250 LLKHKFIVKN 259 (277)
T ss_pred HHhChHhhhc
Confidence 9999998643
No 229
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=9e-34 Score=316.84 Aligned_cols=281 Identities=23% Similarity=0.288 Sum_probs=199.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||.||+|.+. +..+++|+.... .......+. +.+|+++++.++||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~--~~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~- 73 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLES--EDDKMVKKI----AMREIRMLKQLRHENLVNLIEVFRRKK- 73 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhc--cCcchhhHH----HHHHHHHHHhcCCcchhhHHHhcccCC-
Confidence 46899999999999999999984 566777764322 111112222 378999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|..+... ...+++..++.++.||+.||.|||+.||+||||+|+||+++.
T Consensus 74 -------------~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~ 135 (286)
T cd07846 74 -------------RLYLVFEFVDHTVLDDLEKY-----PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQ 135 (286)
T ss_pred -------------eEEEEEecCCccHHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECC
Confidence 34999999999888887654 235899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||++..+..... ......++..|+|||++.+ ...++.++||||||+++|+|+
T Consensus 136 ~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~~l~el~ 195 (286)
T cd07846 136 S-------GVVKLCDFGFARTLAAPGE----------VYTDYVATRWYRAPELLVG---DTKYGRAVDIWAVGCLVTEML 195 (286)
T ss_pred C-------CcEEEEeeeeeeeccCCcc----------ccCcccceeeccCcHHhcc---ccccCchHhHHHHHHHHHHHH
Confidence 7 7899999999876433211 1123457889999999865 234678999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC---ccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---HEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|+.||......+....+.................. .....................+..+.+++.+||+.+|++||
T Consensus 196 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 275 (286)
T cd07846 196 TGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRP 275 (286)
T ss_pred cCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccch
Confidence 999999866554433333211111000000000000 00000000000000000124567799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
++.++++|+||
T Consensus 276 ~~~~il~~~~~ 286 (286)
T cd07846 276 SSSQLLHHEFF 286 (286)
T ss_pred hHHHHhcCCCC
Confidence 99999999986
No 230
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.2e-33 Score=316.45 Aligned_cols=260 Identities=25% Similarity=0.356 Sum_probs=200.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|.+. +..+++|..+... ....... +.+|+.++++++||||+++++.+....
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~~~~----~~~e~~~l~~~~~~~i~~~~~~~~~~~- 72 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---DESKFNQ----IIMELDILHKAVSPYIVDFYGAFFIEG- 72 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---CHHHHHH----HHHHHHHHHhcCCCcHHhhhhheecCC-
Confidence 46899999999999999999985 5667777644321 2222233 378999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCeeee
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILID 962 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|..+++.. .....+++..+..++.||+.||.|||+ .+|+||||||+||+++
T Consensus 73 -------------~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~ 137 (286)
T cd06622 73 -------------AVYMCMEYMDAGSLDKLYAGG--VATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN 137 (286)
T ss_pred -------------eEEEEEeecCCCCHHHHHHhc--cccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC
Confidence 349999999999999998752 112368999999999999999999997 5999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc--CCCCCCchhhHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH--KPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~~s~ksDVWSLGviL~ 1040 (1141)
.+ +.+||+|||.+..+.... .....+++.|+|||.+.+.. ....++.++|||||||++|
T Consensus 138 ~~-------~~~~l~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 198 (286)
T cd06622 138 GN-------GQVKLCDFGVSGNLVASL------------AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSIL 198 (286)
T ss_pred CC-------CCEEEeecCCcccccCCc------------cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHH
Confidence 86 789999999986543211 11235788999999986522 1234578999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHH---HhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLI---QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I---~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|++|+.||...........+ ..+..+.++ ...+.++.+++.+||+.+|.
T Consensus 199 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~ 251 (286)
T cd06622 199 EMALGRYPYPPETYANIFAQLSAIVDGDPPTLP---------------------------SGYSDDAQDFVAKCLNKIPN 251 (286)
T ss_pred HHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCC---------------------------cccCHHHHHHHHHHcccCcc
Confidence 999999999765443333322 222211111 13566789999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001143 1118 ERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~~ 1134 (1141)
+||++.++++|+|+...
T Consensus 252 ~Rp~~~~l~~~~~~~~~ 268 (286)
T cd06622 252 RRPTYAQLLEHPWLVKY 268 (286)
T ss_pred cCCCHHHHhcChhhhhc
Confidence 99999999999998654
No 231
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=1.9e-33 Score=310.44 Aligned_cols=252 Identities=24% Similarity=0.408 Sum_probs=198.1
Q ss_pred CCCceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
-++|++.++||+|+||.||+|.. .+..+++|..... ... ...+ .+|+.++++++||||+++++++...
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~--~~~---~~~~----~~E~~~l~~l~h~~i~~~~~~~~~~-- 73 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQG--SMS---PEAF----LAEANLMKQLQHPRLVRLYAVVTQE-- 73 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCC--CCc---HHHH----HHHHHHHHhcCCcCeeeEEEEEccC--
Confidence 35689999999999999999987 4466777765322 111 2233 7899999999999999999886432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. .....+++..+..++.|++.||+|||+.|++||||||+||+++.
T Consensus 74 -------------~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~ 137 (260)
T cd05067 74 -------------PIYIITEYMENGSLVDFLKT---PEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSE 137 (260)
T ss_pred -------------CcEEEEEcCCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcC
Confidence 24999999999999999875 23346899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||.+......... ......++..|+|||++.. ..++.++||||||+++|+|+
T Consensus 138 ~-------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~pe~~~~----~~~~~~~Di~slG~~l~el~ 197 (260)
T cd05067 138 T-------LCCKIADFGLARLIEDNEYT---------AREGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTEIV 197 (260)
T ss_pred C-------CCEEEccCcceeecCCCCcc---------cccCCcccccccCHHHhcc----CCcCcccchHHHHHHHHHHH
Confidence 7 78999999998765421110 1112235678999999875 45788999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |+.||.+.+..+....+..+..+..+ ...+.++.+++.+||..+|++||++
T Consensus 198 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~ 250 (260)
T cd05067 198 TYGRIPYPGMTNPEVIQNLERGYRMPRP---------------------------DNCPEELYELMRLCWKEKPEERPTF 250 (260)
T ss_pred hCCCCCCCCCChHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHccCChhhCCCH
Confidence 9 99999877766665555433222111 1344579999999999999999999
Q ss_pred HHHHHHHH
Q 001143 1123 GDLYEMFV 1130 (1141)
Q Consensus 1123 ~ElL~~L~ 1130 (1141)
++++..+.
T Consensus 251 ~~l~~~l~ 258 (260)
T cd05067 251 EYLRSVLE 258 (260)
T ss_pred HHHHHHhh
Confidence 99998764
No 232
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.6e-33 Score=313.55 Aligned_cols=258 Identities=24% Similarity=0.353 Sum_probs=197.9
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
+.+|.+.++||+|+||.||+|... +..+++|. +... .....+. +.+|+++++.++||||++++++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~--~~~~--~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~ 75 (280)
T cd05092 4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEA--SESARQD----FQREAELLTVLQHQHIVRFYGV 75 (280)
T ss_pred hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEe--cCcC--CHHHHHH----HHHHHHHHhcCCCCCCceEEEE
Confidence 467899999999999999999742 23444554 3321 2222333 4799999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc----------CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET----------GEKHVSVKLALFIAQDVAAALVELHSK 947 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~----------~~~~Ls~~~i~~Ia~QIa~gL~yLHs~ 947 (1141)
+..... .++||||+++++|.+++...... ....+++..+..++.||+.||+|||++
T Consensus 76 ~~~~~~--------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 141 (280)
T cd05092 76 CTEGRP--------------LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL 141 (280)
T ss_pred EecCCc--------------eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC
Confidence 876543 49999999999999999763211 113588999999999999999999999
Q ss_pred CccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCC
Q 001143 948 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYG 1027 (1141)
Q Consensus 948 gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s 1027 (1141)
||+||||||+|||++.+ +.+||+|||++......... .......+++.|+|||.+.+ ..++
T Consensus 142 ~i~H~dlkp~nil~~~~-------~~~kL~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~ 202 (280)
T cd05092 142 HFVHRDLATRNCLVGQG-------LVVKIGDFGMSRDIYSTDYY--------RVGGRTMLPIRWMPPESILY----RKFT 202 (280)
T ss_pred CeecccccHhhEEEcCC-------CCEEECCCCceeEcCCCcee--------ecCCCccccccccCHHHhcc----CCcC
Confidence 99999999999999877 78999999998654321110 01112335788999999876 4578
Q ss_pred chhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHH
Q 001143 1028 LEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVD 1106 (1141)
Q Consensus 1028 ~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~d 1106 (1141)
.++|||||||++|+|++ |..||......+....+..+..+..+ ..++..+.+
T Consensus 203 ~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~ 255 (280)
T cd05092 203 TESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQGRELERP---------------------------RTCPPEVYA 255 (280)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcCccCCCC---------------------------CCCCHHHHH
Confidence 99999999999999998 99999876666655555443322111 134567899
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHH
Q 001143 1107 VFRRCTEENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1107 LI~~cL~~DP~~RPSa~ElL~~L~ 1130 (1141)
++.+||+.||.+||++.+|++.+.
T Consensus 256 li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 256 IMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred HHHHHccCChhhCCCHHHHHHHHh
Confidence 999999999999999999998764
No 233
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.2e-33 Score=309.08 Aligned_cols=248 Identities=21% Similarity=0.324 Sum_probs=191.1
Q ss_pred eecccCceEEEEEEEC--C--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCC
Q 001143 813 EAGKSVSSSLFRCKFG--S--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 813 ~LG~GsfG~Vy~a~~~--~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
.||+|+||.||+|.+. + ..+|+|+.. ... .....+ .+.+|+.++++++||||+++++++...
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~--~~~-~~~~~~----~~~~E~~~l~~l~h~~ii~~~~~~~~~------- 67 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLK--NEN-EKSVRD----EMMREAEIMHQLDNPYIVRMIGVCEAE------- 67 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcc--ccc-ChHHHH----HHHHHHHHHHhcCCCCeEEEEEEEcCC-------
Confidence 4899999999999874 2 236666543 211 122222 347999999999999999999987532
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..++||||+++++|.+++.. ....+++..+.+++.||+.||.|||++|++||||||+||+++.+
T Consensus 68 --------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~---- 131 (257)
T cd05115 68 --------ALMLVMEMASGGPLNKFLSG----KKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQ---- 131 (257)
T ss_pred --------CeEEEEEeCCCCCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCC----
Confidence 24899999999999999864 13468999999999999999999999999999999999999877
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQV 1047 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~ 1047 (1141)
+.+||+|||.+.......... .......++..|+|||++.. ..++.++|||||||++|+|++ |+.
T Consensus 132 ---~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~el~~~g~~ 197 (257)
T cd05115 132 ---HYAKISDFGLSKALGADDSYY-------KARSAGKWPLKWYAPECINF----RKFSSRSDVWSYGITMWEAFSYGQK 197 (257)
T ss_pred ---CcEEeccCCccccccCCccce-------eccCCCCCCcccCCHHHHcc----CCCCchhhHHHHHHHHHHHhcCCCC
Confidence 789999999987543321110 00111224578999999875 457889999999999999996 999
Q ss_pred CCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHH
Q 001143 1048 PYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYE 1127 (1141)
Q Consensus 1048 Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~ 1127 (1141)
||......+....+..+..+..+ ..++.++.+++.+||..||++||++.+|.+
T Consensus 198 p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~ 250 (257)
T cd05115 198 PYKKMKGPEVMSFIEQGKRLDCP---------------------------AECPPEMYALMKDCWIYKWEDRPNFAKVEE 250 (257)
T ss_pred CcCcCCHHHHHHHHHCCCCCCCC---------------------------CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 99887776666666554432211 144567999999999999999999999998
Q ss_pred HHHh
Q 001143 1128 MFVA 1131 (1141)
Q Consensus 1128 ~L~~ 1131 (1141)
.+..
T Consensus 251 ~l~~ 254 (257)
T cd05115 251 RMRT 254 (257)
T ss_pred HHhh
Confidence 7753
No 234
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.9e-33 Score=318.42 Aligned_cols=262 Identities=22% Similarity=0.349 Sum_probs=201.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 874 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~---------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 874 (1141)
..+|++.+.||+|+||.||+|++. ...+++|+.. .. ......+. +.+|+.+++.+ +||||+++
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~--~~-~~~~~~~~----~~~E~~~l~~l~~h~~i~~~ 86 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLK--DD-ATEKDLSD----LVSEMEMMKMIGKHKNIINL 86 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecc--cc-cchHHHHH----HHHHHHHHHhhccCCCchhe
Confidence 557899999999999999999752 1235666532 11 11222233 37899999999 79999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 943 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----------~~~~Ls~~~i~~Ia~QIa~gL~y 943 (1141)
++++..... .++||||+++++|.+++...... ....+++..+..++.||+.||.|
T Consensus 87 ~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 152 (304)
T cd05101 87 LGACTQDGP--------------LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEY 152 (304)
T ss_pred eEEEecCCc--------------eEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHH
Confidence 999876543 49999999999999999763211 12357889999999999999999
Q ss_pred HHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001143 944 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1023 (1141)
Q Consensus 944 LHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1023 (1141)
||++||+||||||+||+++.+ +.+||+|||.++......... ......+++.|+|||++.+
T Consensus 153 LH~~givH~dlkp~Nili~~~-------~~~kl~D~g~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~---- 213 (304)
T cd05101 153 LASQKCIHRDLAARNVLVTEN-------NVMKIADFGLARDVNNIDYYK--------KTTNGRLPVKWMAPEALFD---- 213 (304)
T ss_pred HHHCCeeecccccceEEEcCC-------CcEEECCCccceecccccccc--------cccCCCCCceeeCchhhcc----
Confidence 999999999999999999877 789999999997654321110 0112235678999999876
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHH
Q 001143 1024 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1102 (1141)
Q Consensus 1024 ~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1141)
..++.++||||||+++|+|++ |..||.+.+..++...+........+ ..++.
T Consensus 214 ~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~ 266 (304)
T cd05101 214 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP---------------------------ANCTN 266 (304)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcCCCC---------------------------CCCCH
Confidence 567899999999999999998 78899877777766665443322111 14556
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1103 FLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1103 ~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.+.+++.+||+.+|.+|||+.|+++.+....
T Consensus 267 ~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 267 ELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred HHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 7999999999999999999999999986653
No 235
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=3.4e-33 Score=308.69 Aligned_cols=251 Identities=24% Similarity=0.363 Sum_probs=195.8
Q ss_pred CCceEeeeecccCceEEEEEEECCc-cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSA-DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~-~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
++|.+.++||+|++|.||+|.+.+. .+++|+.. .... ..+ .+.+|+.++++++||||+++++++...
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~--~~~~---~~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 73 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLK--PGTM---MPE----AFLQEAQIMKKLRHDKLVPLYAVVSEE--- 73 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcc--cCCc---cHH----HHHHHHHHHHhCCCCCeeeEEEEEcCC---
Confidence 5689999999999999999998543 56666532 2111 112 237899999999999999999887432
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.++++. .....+++..+..++.||+.||.|||+.||+||||||+||+++.+
T Consensus 74 ------------~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~ 138 (260)
T cd05069 74 ------------PIYIVTEFMGKGSLLDFLKE---GDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDN 138 (260)
T ss_pred ------------CcEEEEEcCCCCCHHHHHhh---CCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCC
Confidence 23899999999999999975 223458999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+......... ......++..|+|||...+ ..++.++||||||+++|+|++
T Consensus 139 -------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~Pe~~~~----~~~~~~~Di~slG~~l~el~t 198 (260)
T cd05069 139 -------LVCKIADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELVT 198 (260)
T ss_pred -------CeEEECCCccceEccCCccc---------ccCCCccchhhCCHHHhcc----CCcChHHHHHHHHHHHHHHHh
Confidence 78999999999765322111 1112235678999998875 557899999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 -Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|..||.+....+....+.....+..+ ...+..+.+++.+||..||.+||+++
T Consensus 199 ~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 251 (260)
T cd05069 199 KGRVPYPGMVNREVLEQVERGYRMPCP---------------------------QGCPESLHELMKLCWKKDPDERPTFE 251 (260)
T ss_pred CCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------cccCHHHHHHHHHHccCCcccCcCHH
Confidence 89999877666655555433221111 13456799999999999999999999
Q ss_pred HHHHHHH
Q 001143 1124 DLYEMFV 1130 (1141)
Q Consensus 1124 ElL~~L~ 1130 (1141)
++++.+.
T Consensus 252 ~i~~~l~ 258 (260)
T cd05069 252 YIQSFLE 258 (260)
T ss_pred HHHHHHh
Confidence 9998764
No 236
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-34 Score=345.82 Aligned_cols=267 Identities=23% Similarity=0.338 Sum_probs=201.5
Q ss_pred CceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeee-EecCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGH-KISSK 882 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~-~~~~~ 882 (1141)
++++.++|.+|||+.||+|.+.+ ..+|+|..... +....+.+ .+||.+|++|+ |+|||.+++. .....
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~----de~~L~~v----~~EI~~MK~L~gh~nIV~yidss~~~~~ 109 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN----DEEALNAV----KREIDIMKLLSGHKNIVSYIDSSAINRS 109 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC----CHHHHHHH----HHHHHHHHHhcCCCceeeEecccccccc
Confidence 46999999999999999999843 67777764322 33444444 89999999996 9999999994 33211
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCCee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL 960 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g--IvHrDLKP~NIL 960 (1141)
.......+.|.||||.||+|-+++.... ...|++.++++|++|+++|+.+||..+ |||||||-+|||
T Consensus 110 --------~~~~~~EvllLmEyC~gg~Lvd~mn~Rl---q~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvL 178 (738)
T KOG1989|consen 110 --------SNNGVWEVLLLMEYCKGGSLVDFMNTRL---QTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVL 178 (738)
T ss_pred --------CCCceeEEEeehhhccCCcHHHHHHHHH---hccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheE
Confidence 0112357799999999999999998632 234999999999999999999999886 999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccc-ccc--ccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFL-HTC--CIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~-~~~--~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|+.+ ++.||||||.|....... ... ...+.. -....|+.|+|||++.- ..+..+++|+|||||||
T Consensus 179 ls~~-------g~~KLCDFGSatt~~~~~~~~~e~~~ve~e----I~k~TTp~YRsPEMIDl-ysg~pI~eKsDIWALGc 246 (738)
T KOG1989|consen 179 LSAD-------GNYKLCDFGSATTKILSPTSAQEVNYVEEE----IEKYTTPQYRSPEMIDL-YSGLPIGEKSDIWALGC 246 (738)
T ss_pred EcCC-------CCEEeCcccccccccCCCccHHHHHHHHHH----HHhhCCccccChHHHhh-hcCCCCcchhHHHHHHH
Confidence 9988 889999999986432111 000 000000 01246999999999864 33467899999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1038 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+||-|+..+.||....... |..+.+. .|.. ..++..+.+||+.||+.||.
T Consensus 247 lLYkLCy~t~PFe~sg~la----Ilng~Y~-------------------------~P~~-p~ys~~l~~LI~~mL~~nP~ 296 (738)
T KOG1989|consen 247 LLYKLCYFTTPFEESGKLA----ILNGNYS-------------------------FPPF-PNYSDRLKDLIRTMLQPNPD 296 (738)
T ss_pred HHHHHHHhCCCcCcCccee----EEecccc-------------------------CCCC-ccHHHHHHHHHHHHhccCcc
Confidence 9999999999998643322 2222211 1111 16778899999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001143 1118 ERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~~ 1134 (1141)
+||++.|++.+++....
T Consensus 297 ~RPnI~Qv~~~~~~l~~ 313 (738)
T KOG1989|consen 297 ERPNIYQVLEEIFELAN 313 (738)
T ss_pred cCCCHHHHHHHHHHHhc
Confidence 99999999999887654
No 237
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.4e-33 Score=319.37 Aligned_cols=263 Identities=23% Similarity=0.365 Sum_probs=201.8
Q ss_pred CCCCceEeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccc
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVE 873 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~---------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVk 873 (1141)
+..+|.+.++||+|+||.||+|.+. ...+++|+.. ... .......+ .+|+.+++++ +||||++
T Consensus 10 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~--~~~-~~~~~~~~----~~E~~~l~~l~~h~~iv~ 82 (314)
T cd05099 10 PRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLK--DNA-TDKDLADL----ISEMELMKLIGKHKNIIN 82 (314)
T ss_pred cHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecC--CCC-ChHHHHHH----HHHHHHHHhccCCCCeee
Confidence 3467899999999999999999752 2346666643 211 22223333 7899999999 5999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-----------cCCCCCCHHHHHHHHHHHHHHHH
Q 001143 874 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALV 942 (1141)
Q Consensus 874 llg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-----------~~~~~Ls~~~i~~Ia~QIa~gL~ 942 (1141)
+++++..... .++||||+++++|.+++..... .....+++..+..++.||+.||.
T Consensus 83 ~~~~~~~~~~--------------~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~ 148 (314)
T cd05099 83 LLGVCTQEGP--------------LYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGME 148 (314)
T ss_pred EEEEEccCCc--------------eEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHH
Confidence 9999876543 4999999999999999976321 11235899999999999999999
Q ss_pred HHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001143 943 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1022 (1141)
Q Consensus 943 yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1022 (1141)
|||++||+||||||+|||++.+ +.+||+|||.++......... ......++..|+|||++.+
T Consensus 149 ~lH~~gi~H~dlkp~Nill~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~--- 210 (314)
T cd05099 149 YLESRRCIHRDLAARNVLVTED-------NVMKIADFGLARGVHDIDYYK--------KTSNGRLPVKWMAPEALFD--- 210 (314)
T ss_pred HHHHCCeeeccccceeEEEcCC-------CcEEEcccccccccccccccc--------ccccCCCCccccCHHHHcc---
Confidence 9999999999999999999877 789999999997654211100 0111124567999999875
Q ss_pred CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhH
Q 001143 1023 PNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1101 (1141)
Q Consensus 1023 ~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1141)
..++.++|||||||++|+|++ |..||.+....+....+..+.....+ ..++
T Consensus 211 -~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 262 (314)
T cd05099 211 -RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLREGHRMDKP---------------------------SNCT 262 (314)
T ss_pred -CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCC
Confidence 567899999999999999999 89999887776666665443322111 1345
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1102 SFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1102 ~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.++.+++.+||..||++|||+.++++.+....
T Consensus 263 ~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~ 294 (314)
T cd05099 263 HELYMLMRECWHAVPTQRPTFKQLVEALDKVL 294 (314)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 57899999999999999999999999887654
No 238
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=2.8e-33 Score=309.92 Aligned_cols=259 Identities=27% Similarity=0.390 Sum_probs=196.8
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.+|++.++||+|+||.||+|.+. +..+++|....+..... ....+ .+.+|+.++++++||||+++++++.+..
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 77 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVN----ALECEIQLLKNLLHERIVQYYGCLRDPM 77 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHH----HHHHHHHHHHhcCCCCeeeEEeEeccCC
Confidence 47899999999999999999974 45677776543322111 12223 3478999999999999999999876532
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. ...++||||+++++|.+++.+ ...+++..+..++.|++.||.|||+++|+|+||||+||+++
T Consensus 78 ~------------~~~~~v~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~ 140 (265)
T cd06652 78 E------------RTLSIFMEHMPGGSIKDQLKS-----YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD 140 (265)
T ss_pred C------------ceEEEEEEecCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec
Confidence 1 245899999999999999875 23588999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+......... ........++..|+|||++.+ ..++.++|||||||++|+|
T Consensus 141 ~~-------~~~~l~Dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~el 202 (265)
T cd06652 141 SV-------GNVKLGDFGASKRLQTICLS-------GTGMKSVTGTPYWMSPEVISG----EGYGRKADIWSVGCTVVEM 202 (265)
T ss_pred CC-------CCEEECcCcccccccccccc-------ccccccCCCCccccChhhhcC----CCCCcchhHHHHHHHHHHH
Confidence 77 78999999998754321110 001123358899999999875 4578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++|+.||...........+.... .+.. ....+..+.+++.+|+. +|++||+
T Consensus 203 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~i~~~l~-~p~~Rp~ 254 (265)
T cd06652 203 LTEKPPWAEFEAMAAIFKIATQPTNPVL---------------------------PPHVSDHCRDFLKRIFV-EAKLRPS 254 (265)
T ss_pred hhCCCCCCccchHHHHHHHhcCCCCCCC---------------------------chhhCHHHHHHHHHHhc-ChhhCCC
Confidence 99999997654443333222111 1111 11345568899999995 9999999
Q ss_pred HHHHHHHHHh
Q 001143 1122 AGDLYEMFVA 1131 (1141)
Q Consensus 1122 a~ElL~~L~~ 1131 (1141)
++++++|+|.
T Consensus 255 ~~~il~~~~~ 264 (265)
T cd06652 255 ADELLRHTFV 264 (265)
T ss_pred HHHHhcCccc
Confidence 9999999986
No 239
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3e-33 Score=313.78 Aligned_cols=260 Identities=24% Similarity=0.363 Sum_probs=199.2
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
...+|++.+.||+|+||.||+|.+. +..+++|+.. .. ........ +.+|+.+++++.||||+++++
T Consensus 3 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~--~~-~~~~~~~~----~~~ei~~l~~l~h~~iv~~~~ 75 (288)
T cd05050 3 PRNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLK--EE-ASADMQAD----FQREAALMAEFDHPNIVKLLG 75 (288)
T ss_pred ChHhceecccccccccccEEEEEEcccCCCCcceeEEEEecC--CC-cCHHHHHH----HHHHHHHHHhcCCCchheEEE
Confidence 3467999999999999999999863 3456666543 21 12222233 378999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-----------------cCCCCCCHHHHHHHHHHHHH
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------------TGEKHVSVKLALFIAQDVAA 939 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-----------------~~~~~Ls~~~i~~Ia~QIa~ 939 (1141)
++.+... .++||||+++++|.+++..... .....+++..++.++.||+.
T Consensus 76 ~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~ 141 (288)
T cd05050 76 VCAVGKP--------------MCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAA 141 (288)
T ss_pred EEcCCCc--------------cEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHH
Confidence 9876543 3999999999999999975311 11235788999999999999
Q ss_pred HHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcc
Q 001143 940 ALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA 1019 (1141)
Q Consensus 940 gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 1019 (1141)
||.|||+++++||||||+||+++.+ +.++|+|||.+..+...... ........++.|+|||.+.+
T Consensus 142 aL~~lH~~~i~H~dl~p~nil~~~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~ 206 (288)
T cd05050 142 GMAYLSERKFVHRDLATRNCLVGEN-------MVVKIADFGLSRNIYSADYY--------KASENDAIPIRWMPPESIFY 206 (288)
T ss_pred HHHHHHhCCeecccccHhheEecCC-------CceEECccccceecccCccc--------cccCCCccChhhcCHHHHhc
Confidence 9999999999999999999999877 78999999998654321110 01112234677999999876
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhh
Q 001143 1020 MHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAEL 1098 (1141)
Q Consensus 1020 ~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1141)
..++.++|||||||++|+|++ |..||.+....+....+..+.....+ .
T Consensus 207 ----~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~ 255 (288)
T cd05050 207 ----NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVLSCP---------------------------D 255 (288)
T ss_pred ----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCCCC---------------------------C
Confidence 567899999999999999998 88899877766666555443322111 1
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 001143 1099 ETLSFLVDVFRRCTEENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1099 ~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~ 1130 (1141)
..+..+.+++.+||+.||.+|||+.|+++.|.
T Consensus 256 ~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 256 NCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred CCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 34567999999999999999999999998764
No 240
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=2.6e-33 Score=314.71 Aligned_cols=267 Identities=25% Similarity=0.349 Sum_probs=202.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~ 881 (1141)
..+|++.+.||+|+||.||+|... +..+++|+.. ... ..... +.+|+.++.++ +||||+++++++...
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~--~~~---~~~~~----~~~e~~~l~~l~~h~ni~~~~~~~~~~ 91 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILD--PIS---DVDEE----IEAEYNILQSLPNHPNVVKFYGMFYKA 91 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEec--ccc---cHHHH----HHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence 567999999999999999999984 5567777643 211 11122 36899999999 799999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+.. .....++||||+++++|.++++..... ...+++..++.++.|++.||+|||++||+||||||+||++
T Consensus 92 ~~~---------~~~~~~lv~ey~~~~sL~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili 161 (291)
T cd06639 92 DKL---------VGGQLWLVLELCNGGSVTELVKGLLIC-GQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILL 161 (291)
T ss_pred ccc---------CCCeeEEEEEECCCCcHHHHHHHhhhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE
Confidence 321 123569999999999999998753322 3468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~ 1040 (1141)
+.+ +.+||+|||.+........ ......|+..|+|||.+.... ....++.++|||||||++|
T Consensus 162 ~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~ 224 (291)
T cd06639 162 TTE-------GGVKLVDFGVSAQLTSTRL----------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAI 224 (291)
T ss_pred cCC-------CCEEEeecccchhcccccc----------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHH
Confidence 887 7899999999876443111 111335888999999986421 1123678999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|+.||......+....+.....+.+.. + ......+.+++.+||+.||++||
T Consensus 225 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~---~~~~~~l~~li~~~l~~~p~~Rp 279 (291)
T cd06639 225 ELGDGDPPLFDMHPVKTLFKIPRNPPPTLLH----------------------P---EKWCRSFNHFISQCLIKDFEARP 279 (291)
T ss_pred HHhhCCCCCCCCcHHHHHHHHhcCCCCCCCc----------------------c---cccCHHHHHHHHHHhhcChhhCc
Confidence 9999999998765544443333322211110 0 12345689999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001143 1121 TAGDLYEMFVAR 1132 (1141)
Q Consensus 1121 Sa~ElL~~L~~~ 1132 (1141)
++.|+++|+|++
T Consensus 280 s~~~il~~~~~~ 291 (291)
T cd06639 280 SVTHLLEHPFIK 291 (291)
T ss_pred CHHHHhcCcccC
Confidence 999999999974
No 241
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.3e-33 Score=310.06 Aligned_cols=259 Identities=20% Similarity=0.333 Sum_probs=197.8
Q ss_pred CCCceEeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
..+|++.+.||+|+||.||+|.+.. ..+++|+.. .. ......+.+ ..|+.++++++||||+++++++.
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~--~~-~~~~~~~~~----~~e~~~l~~l~h~ni~~~~~~~~ 75 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLK--SG-YTEKQRRDF----LSEASIMGQFDHPNIIHLEGVVT 75 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcC--CC-CCHHHHHHH----HHHHHHHHhCCCcCcceEEEEEC
Confidence 4568999999999999999998742 236776643 21 122333344 89999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+... .++||||+++++|.+++... ...+++.+++.++.|++.||.|||++|++||||||+||
T Consensus 76 ~~~~--------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~ni 137 (269)
T cd05065 76 KSRP--------------VMIITEFMENGALDSFLRQN----DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNI 137 (269)
T ss_pred CCCc--------------eEEEEecCCCCcHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheE
Confidence 6543 49999999999999998751 34689999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.+||+|||.+.......... ..........+..|+|||++.+ ..++.++|||||||++
T Consensus 138 li~~~-------~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~y~~PE~~~~----~~~~~~~DvwslG~~l 201 (269)
T cd05065 138 LVNSN-------LVCKVSDFGLSRFLEDDTSDP-----TYTSSLGGKIPIRWTAPEAIAY----RKFTSASDVWSYGIVM 201 (269)
T ss_pred EEcCC-------CcEEECCCccccccccCcccc-----ccccccCCCcceeecCHhHhcc----CcccchhhhhhhHHHH
Confidence 99877 789999999986543321110 0000011112457999999875 5678999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|||++ |..||......+....+........+ ..++..+.+++.+||..+|.+
T Consensus 202 ~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~ 254 (269)
T cd05065 202 WEVMSYGERPYWDMSNQDVINAIEQDYRLPPP---------------------------MDCPTALHQLMLDCWQKDRNA 254 (269)
T ss_pred HHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCc---------------------------ccCCHHHHHHHHHHcCCChhh
Confidence 99887 99999877766666555432211110 134566899999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001143 1119 RPTAGDLYEMFVA 1131 (1141)
Q Consensus 1119 RPSa~ElL~~L~~ 1131 (1141)
||++.+++..+..
T Consensus 255 Rp~~~~i~~~l~~ 267 (269)
T cd05065 255 RPKFGQIVSTLDK 267 (269)
T ss_pred CcCHHHHHHHHHh
Confidence 9999999987653
No 242
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1e-33 Score=318.46 Aligned_cols=285 Identities=22% Similarity=0.284 Sum_probs=203.0
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.+++|++.+.||+|+||.||+|.+. +..+++|..+... .. +.+...+.+|+.++++++||||+++++++...
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~----~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~ 76 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEK--EK----EGFPITSLREINILLKLQHPNIVTVKEVVVGS 76 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecc--cc----ccchhhHHHHHHHHHhcCCCCEEEEEEEEEec
Confidence 3568999999999999999999985 4456666544322 11 11222346899999999999999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ....++||||++ ++|.+++... ...+++..++.++.||+.||+|||++||+||||||+||++
T Consensus 77 ~------------~~~~~lv~e~~~-~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili 139 (293)
T cd07843 77 N------------LDKIYMVMEYVE-HDLKSLMETM----KQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL 139 (293)
T ss_pred C------------CCcEEEEehhcC-cCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE
Confidence 2 124599999997 5999988752 2368999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.++|+|||.+........ ......+++.|+|||.+.+. ..++.++||||||+++|+
T Consensus 140 ~~~-------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~~---~~~~~~~Di~slG~~l~~ 199 (293)
T cd07843 140 NNR-------GILKICDFGLAREYGSPLK----------PYTQLVVTLWYRAPELLLGA---KEYSTAIDMWSVGCIFAE 199 (293)
T ss_pred CCC-------CcEEEeecCceeeccCCcc----------ccccccccccccCchhhcCC---ccccchhhHHHHHHHHHH
Confidence 887 7899999999876543211 11123478899999998752 346789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcc---ccccccCCCCCCchhhhh-hHHHHHHHHHHhcccCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE---HEVAQSGSGFEKPEAELE-TLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~L~dLI~~cL~~DP~ 1117 (1141)
|++|..||......+....+...........+........ .................. .++.+.++|.+||+.||+
T Consensus 200 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~ 279 (293)
T cd07843 200 LLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPA 279 (293)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCcc
Confidence 9999999988776665555432221111111111000000 000000000000000001 467789999999999999
Q ss_pred CCCCHHHHHHHHHh
Q 001143 1118 ERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~ 1131 (1141)
+|||+.|+++|.||
T Consensus 280 ~R~t~~ell~~~~f 293 (293)
T cd07843 280 KRISAEDALKHPYF 293 (293)
T ss_pred ccCCHHHHhcCCCC
Confidence 99999999999986
No 243
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=1.8e-33 Score=312.39 Aligned_cols=266 Identities=25% Similarity=0.417 Sum_probs=199.9
Q ss_pred CceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCCh--HHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSA--DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~--~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.|.+.+.||+|+||.||+|.. .+..+++|..+........ .........+.+|+.++++++||||+++++++....
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 578899999999999999986 4566777765433221111 112222334578999999999999999999987644
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++++ ...+++..+..++.||+.||.|||+++++||||+|+||+++
T Consensus 82 --------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~ 142 (272)
T cd06629 82 --------------YLSIFLEYVPGGSIGSCLRT-----YGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD 142 (272)
T ss_pred --------------ceEEEEecCCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc
Confidence 34999999999999999976 24689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+......... .......++..|+|||.+.... ..++.++||||||+++|+|
T Consensus 143 ~~-------~~~~l~d~~~~~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~~~--~~~~~~~Dv~slG~~l~~l 205 (272)
T cd06629 143 AD-------GICKISDFGISKKSDDIYDN--------DQNMSMQGSVFWMAPEVIHSYS--QGYSAKVDIWSLGCVVLEM 205 (272)
T ss_pred CC-------CeEEEeeccccccccccccc--------cccccccCCccccCHHHhcccc--CCCCccchhHHHHHHHHHH
Confidence 77 78999999998654321100 0112335788999999987522 2468899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHH-hCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~-~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++|..||......+....+. ....+.++. ......+..+.+++.+||..||.+||+
T Consensus 206 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~li~~~l~~~p~~Rps 262 (272)
T cd06629 206 FAGRRPWSDEEAIAAMFKLGNKRSAPPIPP-----------------------DVSMNLSPVALDFLNACFTINPDNRPT 262 (272)
T ss_pred HhCCCCCcCcchHHHHHHhhccccCCcCCc-----------------------cccccCCHHHHHHHHHHhcCChhhCCC
Confidence 99999997554433222221 111111110 011145678999999999999999999
Q ss_pred HHHHHHHHHh
Q 001143 1122 AGDLYEMFVA 1131 (1141)
Q Consensus 1122 a~ElL~~L~~ 1131 (1141)
+.++++|+|+
T Consensus 263 ~~~il~~~~~ 272 (272)
T cd06629 263 ARELLQHPFI 272 (272)
T ss_pred HHHHhhCCCC
Confidence 9999999884
No 244
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.1e-33 Score=319.30 Aligned_cols=258 Identities=26% Similarity=0.419 Sum_probs=200.6
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|.....||+|+||.||++... +..+++|..... .....+. +.+|+.++++++||||+++++.+...+
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~----~~~~~~~----~~~e~~~l~~l~h~~ii~~~~~~~~~~-- 92 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR----KQQRREL----LFNEVVIMRDYHHENVVDMYNSYLVGD-- 92 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc----hHHHHHH----HHHHHHHHHhCCCCcHHHHHHheecCC--
Confidence 3566788999999999999874 556777764321 1222223 478999999999999999999987644
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 93 ------------~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~ 154 (292)
T cd06658 93 ------------ELWVVMEFLEGGALTDIVTH------TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSD 154 (292)
T ss_pred ------------eEEEEEeCCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC
Confidence 34999999999999998854 358999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||++........ ......|+..|+|||.+.+ ..++.++||||||+++|||++
T Consensus 155 -------~~~kL~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slGvil~el~~ 213 (292)
T cd06658 155 -------GRIKLSDFGFCAQVSKEVP----------KRKSLVGTPYWMAPEVISR----LPYGTEVDIWSLGIMVIEMID 213 (292)
T ss_pred -------CCEEEccCcchhhcccccc----------cCceeecCccccCHHHHcc----CCCCchhhHHHHHHHHHHHHh
Confidence 7899999999865432110 1123458899999999865 467889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||......+....+.....+.... ....+..+.+++.+||..||.+|||+.+
T Consensus 214 g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~~P~~Rpt~~~ 268 (292)
T cd06658 214 GEPPYFNEPPLQAMRRIRDNLPPRVKD-------------------------SHKVSSVLRGFLDLMLVREPSQRATAQE 268 (292)
T ss_pred CCCCCCCCCHHHHHHHHHhcCCCcccc-------------------------ccccCHHHHHHHHHHccCChhHCcCHHH
Confidence 999998766555444433222111110 0134556889999999999999999999
Q ss_pred HHHHHHhhcCCCCC
Q 001143 1125 LYEMFVARTSSSIS 1138 (1141)
Q Consensus 1125 lL~~L~~~~~s~~s 1138 (1141)
+++|+|+.....-+
T Consensus 269 il~~~~~~~~~~~~ 282 (292)
T cd06658 269 LLQHPFLKLAGPPS 282 (292)
T ss_pred HhhChhhhccCCcc
Confidence 99999998654443
No 245
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=4.5e-33 Score=309.18 Aligned_cols=254 Identities=21% Similarity=0.323 Sum_probs=197.3
Q ss_pred CCceEeeeecccCceEEEEEEECCc-----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSA-----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~-----~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
.+|.+.++||+|+||.||+|.+... .+++|..... . .....+. +.+|+.++++++||||+++++++.+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~--~-~~~~~~~----~~~e~~~l~~~~h~~i~~~~~~~~~ 78 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNC--T-SPSVREK----FLQEAYIMRQFDHPHIVKLIGVITE 78 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCc--C-CHHHHHH----HHHHHHHHHhCCCCchhceeEEEcC
Confidence 4689999999999999999987432 3555553321 1 1222233 4789999999999999999998764
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
. ..++||||+++++|.+++... ...+++..+..++.||+.||+|||++|++||||||+||+
T Consensus 79 ~---------------~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nil 139 (270)
T cd05056 79 N---------------PVWIVMELAPLGELRSYLQVN----KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVL 139 (270)
T ss_pred C---------------CcEEEEEcCCCCcHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEE
Confidence 2 238999999999999999751 235899999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.++|+|||++......... ......++..|+|||.+.. ..++.++||||||+++|
T Consensus 140 i~~~-------~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~ 199 (270)
T cd05056 140 VSSP-------DCVKLGDFGLSRYLEDESYY---------KASKGKLPIKWMAPESINF----RRFTSASDVWMFGVCMW 199 (270)
T ss_pred EecC-------CCeEEccCceeeecccccce---------ecCCCCccccccChhhhcc----CCCCchhhhHHHHHHHH
Confidence 9887 78999999998765432110 0111234568999999865 45789999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1041 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1041 ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|++ |..||......+....+..+..+..+ ...+..+.+++.+||..+|.+|
T Consensus 200 el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~P~~R 252 (270)
T cd05056 200 EILMLGVKPFQGVKNNDVIGRIENGERLPMP---------------------------PNCPPTLYSLMTKCWAYDPSKR 252 (270)
T ss_pred HHHHcCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHcCCChhhC
Confidence 9996 99999877766655555444332211 1445679999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 001143 1120 PTAGDLYEMFVAR 1132 (1141)
Q Consensus 1120 PSa~ElL~~L~~~ 1132 (1141)
||+.++++.+...
T Consensus 253 pt~~~~~~~l~~~ 265 (270)
T cd05056 253 PRFTELKAQLSDI 265 (270)
T ss_pred cCHHHHHHHHHHH
Confidence 9999999988654
No 246
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.1e-33 Score=316.92 Aligned_cols=255 Identities=28% Similarity=0.404 Sum_probs=198.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||+||+|.+. +..+++|+..... .... ...+.+|+++++.++||||+++++++....
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 76 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA---KSSV----RKQILRELQIMHECRSPYIVSFYGAFLNEN 76 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC---cchH----HHHHHHHHHHHHHcCCCCcceEeeeEecCC
Confidence 457899999999999999999985 6667777654321 1122 233479999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILI 961 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NILl 961 (1141)
..++||||+++++|.+++.. .+.+++..+..++.|++.||.|||+ .+++||||||+||++
T Consensus 77 --------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~ 137 (284)
T cd06620 77 --------------NICMCMEFMDCGSLDRIYKK-----GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILV 137 (284)
T ss_pred --------------EEEEEEecCCCCCHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEE
Confidence 45999999999999999875 2468999999999999999999997 699999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.++|+|||++....... .....|+..|+|||++.+ ..++.++|||||||++|+
T Consensus 138 ~~~-------~~~~l~d~gl~~~~~~~~------------~~~~~~~~~~~aPE~~~~----~~~~~~~Di~slG~~l~~ 194 (284)
T cd06620 138 NSR-------GQIKLCDFGVSGELINSI------------ADTFVGTSTYMSPERIQG----GKYTVKSDVWSLGISIIE 194 (284)
T ss_pred CCC-------CcEEEccCCcccchhhhc------------cCccccCcccCCHHHHcc----CCCCccchHHHHHHHHHH
Confidence 877 789999999886432211 113468999999999875 467889999999999999
Q ss_pred HHhCCCCCCCCCHH-----------HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001143 1042 LLTLQVPYMGLSEL-----------EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1110 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~-----------el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~ 1110 (1141)
|++|..||...... +....+.....+.++ ....+..+.+++.+
T Consensus 195 l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~ 248 (284)
T cd06620 195 LALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLP--------------------------SSDFPEDLRDFVDA 248 (284)
T ss_pred HHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCC--------------------------chhcCHHHHHHHHH
Confidence 99999999754432 111111111111100 01245678999999
Q ss_pred hcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1111 CTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1111 cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
||+.||.+|||+.|+++|+|+...
T Consensus 249 ~l~~dp~~Rpt~~e~~~~~~~~~~ 272 (284)
T cd06620 249 CLLKDPTERPTPQQLCAMPPFIQA 272 (284)
T ss_pred HhcCCcccCcCHHHHhcCcccccc
Confidence 999999999999999999988654
No 247
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2e-35 Score=362.26 Aligned_cols=267 Identities=27% Similarity=0.437 Sum_probs=214.5
Q ss_pred CceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
++.-..+||.|.||.||-|....+.+.++++.+..........+. +.+|+.++..++|||+|++||+-.+.+.
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~----i~eEm~vlE~lnHpNlV~YyGVEvHRek--- 1308 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKL----IAEEMKVLEGLNHPNLVRYYGVEVHREK--- 1308 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcc----hHHHHHHHHhccCccccccCceeecHHH---
Confidence 356778999999999999998555444444434433322222333 3789999999999999999998776553
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
.+|.||||++|+|.++++. .+..++.....+..|++.|+.|||++|||||||||.||+++.+
T Consensus 1309 -----------v~IFMEyC~~GsLa~ll~~-----gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~-- 1370 (1509)
T KOG4645|consen 1309 -----------VYIFMEYCEGGSLASLLEH-----GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFN-- 1370 (1509)
T ss_pred -----------HHHHHHHhccCcHHHHHHh-----cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecC--
Confidence 4899999999999999986 3457888888899999999999999999999999999999988
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1046 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk 1046 (1141)
|.+|++|||.|+.+.....+.. .......||+.|||||++.+... ....-++||||+||++.||+||+
T Consensus 1371 -----g~iK~~DFGsa~ki~~~~~~~~------~el~~~~GT~~YMAPEvit~t~~-kG~~~A~DiWslGCVVlEM~tGk 1438 (1509)
T KOG4645|consen 1371 -----GLIKYGDFGSAVKIKNNAQTMP------GELQSMMGTPMYMAPEVITGTKG-KGHGGAADIWSLGCVVLEMATGK 1438 (1509)
T ss_pred -----CcEEeecccceeEecCchhcCC------HHHHhhcCCchhcCchhhccccc-CCCCcchhhhcccceEEEeecCC
Confidence 8999999999988766432221 12345689999999999988543 23457899999999999999999
Q ss_pred CCCCCC-CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1047 VPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1047 ~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
.||... +..++...+..+..|.++.. .+.+-++||..||..||++|.++.|+
T Consensus 1439 rPW~~~dne~aIMy~V~~gh~Pq~P~~---------------------------ls~~g~dFle~Cl~~dP~~Rw~~~ql 1491 (1509)
T KOG4645|consen 1439 RPWAELDNEWAIMYHVAAGHKPQIPER---------------------------LSSEGRDFLEHCLEQDPKMRWTASQL 1491 (1509)
T ss_pred CchhhccchhHHHhHHhccCCCCCchh---------------------------hhHhHHHHHHHHHhcCchhhhHHHHH
Confidence 999764 45677788888888877753 45568999999999999999999999
Q ss_pred HHHHHhhcCCCC
Q 001143 1126 YEMFVARTSSSI 1137 (1141)
Q Consensus 1126 L~~L~~~~~s~~ 1137 (1141)
++|-+.+.....
T Consensus 1492 le~~f~~~~~d~ 1503 (1509)
T KOG4645|consen 1492 LEHAFGKSCTDE 1503 (1509)
T ss_pred HHhhcccccccc
Confidence 999888765443
No 248
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-34 Score=327.90 Aligned_cols=263 Identities=22% Similarity=0.332 Sum_probs=198.4
Q ss_pred CCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~~ 883 (1141)
..|++.++||.||.+.||++...+ +.+|+|..... ..+......| ..|+..|.+|+ |.+||++++|-..+++
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~--~~D~qtl~gy----~nEI~lL~KLkg~~~IIqL~DYEv~d~~ 434 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLL--EADNQTLDGY----RNEIALLNKLKGHDKIIQLYDYEVTDGY 434 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHh--hcCHHHHHHH----HHHHHHHHHhcCCceEEEEeeeeccCce
Confidence 459999999999999999998743 33444432222 2334445555 89999999996 9999999999887664
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+ ||||||-+ .+|..+++.. ...++...++.+.+||+.|+.++|.+||||.||||.|+|+-.
T Consensus 435 l--------------YmvmE~Gd-~DL~kiL~k~----~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk 495 (677)
T KOG0596|consen 435 L--------------YMVMECGD-IDLNKILKKK----KSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK 495 (677)
T ss_pred E--------------EEEeeccc-ccHHHHHHhc----cCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe
Confidence 4 99999875 8999999872 223443488999999999999999999999999999998854
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC-------CCCCchhhHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP-------NLYGLEVDIWSYG 1036 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~-------~~~s~ksDVWSLG 1036 (1141)
|.+||+|||.|..+...... ......+||+.||+||.+..+... -..+.++||||+|
T Consensus 496 --------G~LKLIDFGIA~aI~~DTTs--------I~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLG 559 (677)
T KOG0596|consen 496 --------GRLKLIDFGIANAIQPDTTS--------IVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLG 559 (677)
T ss_pred --------eeEEeeeechhcccCccccc--------eeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhh
Confidence 78999999999877653322 233466899999999999765432 1257899999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1037 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
||||+|+.|+.||.... ..+.++.....|.- ..+.|+. ....++.++++.||..||
T Consensus 560 CILYqMvYgktPf~~~~--n~~aKl~aI~~P~~--------------------~Iefp~~--~~~~~li~~mK~CL~rdP 615 (677)
T KOG0596|consen 560 CILYQMVYGKTPFGQII--NQIAKLHAITDPNH--------------------EIEFPDI--PENDELIDVMKCCLARDP 615 (677)
T ss_pred hHHHHHHhcCCchHHHH--HHHHHHHhhcCCCc--------------------cccccCC--CCchHHHHHHHHHHhcCc
Confidence 99999999999997432 23333333222211 1111111 222338999999999999
Q ss_pred CCCCCHHHHHHHHHhhc
Q 001143 1117 TERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~ 1133 (1141)
.+|||+.++|+|+|...
T Consensus 616 kkR~si~eLLqhpFl~~ 632 (677)
T KOG0596|consen 616 KKRWSIPELLQHPFLQI 632 (677)
T ss_pred ccCCCcHHHhcCccccc
Confidence 99999999999999865
No 249
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=3e-33 Score=314.05 Aligned_cols=282 Identities=19% Similarity=0.242 Sum_probs=198.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
+.+++|++.+.||+|++|.||+|.+. +..+++|........ ..... +.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~ 74 (291)
T cd07844 2 GKLETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE---GAPFT----AIREASLLKDLKHANIVTLHDIIHT 74 (291)
T ss_pred CCccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc---CCchh----HHHHHHHHhhCCCcceeeEEEEEec
Confidence 45688999999999999999999974 566777775433211 11111 2689999999999999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..++||||++ ++|.+++.+. ...+++..++.++.||+.||.|||++||+||||||+||+
T Consensus 75 ~~--------------~~~lv~e~~~-~~L~~~~~~~----~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil 135 (291)
T cd07844 75 KK--------------TLTLVFEYLD-TDLKQYMDDC----GGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLL 135 (291)
T ss_pred CC--------------eEEEEEecCC-CCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEE
Confidence 54 3499999998 5999988752 236899999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||.++........ .....++..|+|||++.+ ...++.++||||+|+++|
T Consensus 136 ~~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~~~aPE~~~~---~~~~~~~~Dv~slG~il~ 195 (291)
T cd07844 136 ISER-------GELKLADFGLARAKSVPSKT----------YSNEVVTLWYRPPDVLLG---STEYSTSLDMWGVGCIFY 195 (291)
T ss_pred EcCC-------CCEEECccccccccCCCCcc----------ccccccccccCCcHHhhc---CcccCcHHHHHHHHHHHH
Confidence 9887 78999999998653221110 112246788999999865 234678999999999999
Q ss_pred HHHhCCCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchh-----hhhhHHHHHHHHHHhccc
Q 001143 1041 ELLTLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA-----ELETLSFLVDVFRRCTEE 1114 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~dLI~~cL~~ 1114 (1141)
+|++|+.||.... ..+....+...........+............. ......... .......+.+++.+||+.
T Consensus 196 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 274 (291)
T cd07844 196 EMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYS-FPFYPPRPLINHAPRLDRIPHGEELALKFLQY 274 (291)
T ss_pred HHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcccccccc-ccccCChhHHHhCcCCCCchhHHHHHHHHhcc
Confidence 9999999997654 223232221111111111111110000000000 000000000 011226788999999999
Q ss_pred CCCCCCCHHHHHHHHHh
Q 001143 1115 NPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1115 DP~~RPSa~ElL~~L~~ 1131 (1141)
||++|||+.+++.|+||
T Consensus 275 ~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 275 EPKKRISAAEAMKHPYF 291 (291)
T ss_pred CcccccCHHHHhcCCCC
Confidence 99999999999999986
No 250
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.3e-33 Score=315.69 Aligned_cols=296 Identities=17% Similarity=0.197 Sum_probs=203.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+++|++.++||+|+||.||+|.+. +..+|+|....... ... +...+.+|+.++++++||||+++++++..
T Consensus 9 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~--~~~----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~ 82 (310)
T cd07865 9 DEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENE--KEG----FPITALREIKILQLLKHENVVNLIEICRT 82 (310)
T ss_pred chhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCC--cCC----chhHHHHHHHHHHhCCCCCccceEEEEec
Confidence 34678999999999999999999984 56677776543221 111 11223689999999999999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.... ........++||||+. ++|.+++.. ....+++.+++.++.||+.||+|||++||+|+||||+||+
T Consensus 83 ~~~~------~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil 151 (310)
T cd07865 83 KATP------YNRYKGSFYLVFEFCE-HDLAGLLSN----KNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANIL 151 (310)
T ss_pred cccc------ccCCCceEEEEEcCCC-cCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEE
Confidence 4321 1112335699999996 688888765 2236899999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||.+.......... ........++..|+|||.+.+. ..++.++||||||+++|
T Consensus 152 ~~~~-------~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG~~l~ 215 (310)
T cd07865 152 ITKD-------GILKLADFGLARAFSLSKNSK------PNRYTNRVVTLWYRPPELLLGE---RDYGPPIDMWGAGCIMA 215 (310)
T ss_pred ECCC-------CcEEECcCCCcccccCCcccC------CCCccCcccCccccCcHHhcCC---cccCchhhhHHHHHHHH
Confidence 9887 789999999997654322110 0111233578899999998652 34678999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcc-ccccccCCCCCC-c--hhhhhhHHHHHHHHHHhcccCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE-HEVAQSGSGFEK-P--EAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~-~~~~~~~~~~~~-~--~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+|++|..||.+.........+........+..++....... ............ . ......+..+.++|.+||..||
T Consensus 216 el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P 295 (310)
T cd07865 216 EMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDP 295 (310)
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCCh
Confidence 99999999987766554444432111111100000000000 000000000000 0 0000124567899999999999
Q ss_pred CCCCCHHHHHHHHHh
Q 001143 1117 TERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~ 1131 (1141)
.+|||++|+++|+||
T Consensus 296 ~~R~t~~e~l~h~~f 310 (310)
T cd07865 296 AKRIDADTALNHDFF 310 (310)
T ss_pred hhccCHHHHhcCCCC
Confidence 999999999999986
No 251
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=4e-33 Score=307.45 Aligned_cols=254 Identities=25% Similarity=0.388 Sum_probs=199.0
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.-++|++.++||+|+||.||+|.+.+ ..+++|... .... ..+.+ .+|+.++++++||||+++++++....
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~--~~~~---~~~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~ 74 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLK--PGTM---SPEAF----LQEAQIMKKLRHDKLVQLYAVCSEEE 74 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEec--CCcc---CHHHH----HHHHHHHhhCCCCCEeeeeeeeecCC
Confidence 35679999999999999999998743 456666543 2111 12233 78999999999999999999987644
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .++||||+++++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 75 ~--------------~~~v~e~~~~~~L~~~i~~---~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~ 137 (261)
T cd05034 75 P--------------IYIVTEYMSKGSLLDFLKS---GEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG 137 (261)
T ss_pred c--------------eEEEEeccCCCCHHHHHhc---cccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc
Confidence 3 4999999999999999975 2234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+......... ......++..|+|||.+.+ ..++.++||||||+++|+|
T Consensus 138 ~~-------~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~il~~l 197 (261)
T cd05034 138 EN-------LVCKIADFGLARLIEDDEYT---------AREGAKFPIKWTAPEAANY----GRFTIKSDVWSFGILLTEI 197 (261)
T ss_pred CC-------CCEEECccccceeccchhhh---------hhhccCCCccccCHHHhcc----CCcCchhHHHHHHHHHHHH
Confidence 87 78999999998765431110 0112234578999999876 4578999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |+.||.+.........+..+.....+ ...+..+.+++.+||..+|.+||+
T Consensus 198 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~Rp~ 250 (261)
T cd05034 198 VTYGRVPYPGMTNREVLEQVERGYRMPRP---------------------------PNCPEELYDLMLQCWDKDPEERPT 250 (261)
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcccCcccCCC
Confidence 99 99999877666666655433221111 033557899999999999999999
Q ss_pred HHHHHHHHH
Q 001143 1122 AGDLYEMFV 1130 (1141)
Q Consensus 1122 a~ElL~~L~ 1130 (1141)
++++.+.+.
T Consensus 251 ~~~l~~~l~ 259 (261)
T cd05034 251 FEYLQSFLE 259 (261)
T ss_pred HHHHHHHHh
Confidence 999998664
No 252
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=3.6e-33 Score=306.88 Aligned_cols=251 Identities=23% Similarity=0.364 Sum_probs=197.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..+|++.+.||+|+||.||+|.+. +..+++|+.. ..... ...+ .+|++++++++||||+++++++....
T Consensus 3 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~--~~~~~---~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~- 72 (256)
T cd05112 3 PSELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIR--EGAMS---EEDF----IEEAQVMMKLSHPKLVQLYGVCTERS- 72 (256)
T ss_pred hhHeEEEeeecCcccceEEEEEEeCCCeEEEEECC--CCCCC---HHHH----HHHHHHHHhCCCCCeeeEEEEEccCC-
Confidence 457899999999999999999885 5667777643 21111 1233 68999999999999999999987544
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ....+++..+..++.|++.||+|||+++++||||||+||+++.
T Consensus 73 -------------~~~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~ 135 (256)
T cd05112 73 -------------PICLVFEFMEHGCLSDYLRA----QRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGE 135 (256)
T ss_pred -------------ceEEEEEcCCCCcHHHHHHh----CccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcC
Confidence 34999999999999999875 1235889999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||.+......... ......++..|+|||.+.+ ..++.++||||||+++|+|+
T Consensus 136 ~-------~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~~~~~aPe~~~~----~~~~~~~Dv~slG~~l~el~ 195 (256)
T cd05112 136 N-------QVVKVSDFGMTRFVLDDQYT---------SSTGTKFPVKWSSPEVFSF----SKYSSKSDVWSFGVLMWEVF 195 (256)
T ss_pred C-------CeEEECCCcceeecccCccc---------ccCCCccchhhcCHhHhcc----CCcChHHHHHHHHHHHHHHH
Confidence 6 78999999998754321100 0112235678999999875 46788999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |..||......+..+.+..+..+..+ ...+..+.+|+.+||+.+|++|||+
T Consensus 196 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~~~l~~~p~~Rp~~ 248 (256)
T cd05112 196 SEGKTPYENRSNSEVVETINAGFRLYKP---------------------------RLASQSVYELMQHCWKERPEDRPSF 248 (256)
T ss_pred cCCCCCCCcCCHHHHHHHHhCCCCCCCC---------------------------CCCCHHHHHHHHHHcccChhhCCCH
Confidence 8 99999877666666655433221111 0234569999999999999999999
Q ss_pred HHHHHHH
Q 001143 1123 GDLYEMF 1129 (1141)
Q Consensus 1123 ~ElL~~L 1129 (1141)
.++++++
T Consensus 249 ~~~l~~l 255 (256)
T cd05112 249 SLLLHQL 255 (256)
T ss_pred HHHHHhh
Confidence 9999875
No 253
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=5e-33 Score=309.32 Aligned_cols=252 Identities=27% Similarity=0.455 Sum_probs=189.7
Q ss_pred eeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
+.||+|+||.||+|.+... .+.++++..+... .....+.+ .+|+.++.++ +||||+++++++.....
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~----~~E~~~l~~l~~h~~iv~~~~~~~~~~~----- 70 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRDF----AGELEVLCKLGHHPNIINLLGACEHRGY----- 70 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC-CHHHHHHH----HHHHHHHHhhccCCCeeeEEEEEecCCC-----
Confidence 4689999999999997543 3334444333211 12222333 7899999999 79999999999886553
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhh-----------cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-----------~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
.++||||+++++|.+++..... .....+++..+..++.|++.||+|||++|++||||||+
T Consensus 71 ---------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~ 141 (270)
T cd05047 71 ---------LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAAR 141 (270)
T ss_pred ---------ceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccc
Confidence 3999999999999999975321 11235889999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
||+++.+ +.+||+|||++....... .......+..|+|||++.. ..++.++|||||||
T Consensus 142 nili~~~-------~~~kl~dfgl~~~~~~~~-----------~~~~~~~~~~y~apE~~~~----~~~~~~~Di~slG~ 199 (270)
T cd05047 142 NILVGEN-------YVAKIADFGLSRGQEVYV-----------KKTMGRLPVRWMAIESLNY----SVYTTNSDVWSYGV 199 (270)
T ss_pred eEEEcCC-------CeEEECCCCCccccchhh-----------hccCCCCccccCChHHHcc----CCCCchhhHHHHHH
Confidence 9999887 789999999985321100 0111224567999999865 56789999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|||++ |..||.+.+..+....+........+ ...+.++.+++.+||+.||
T Consensus 200 il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p 252 (270)
T cd05047 200 LLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP---------------------------LNCDDEVYDLMRQCWREKP 252 (270)
T ss_pred HHHHHHcCCCCCccccCHHHHHHHHhCCCCCCCC---------------------------CcCCHHHHHHHHHHcccCh
Confidence 9999997 99999876665555554332211110 1344568999999999999
Q ss_pred CCCCCHHHHHHHHHh
Q 001143 1117 TERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~ 1131 (1141)
.+|||+.++++.+..
T Consensus 253 ~~Rps~~~il~~l~~ 267 (270)
T cd05047 253 YERPSFAQILVSLNR 267 (270)
T ss_pred hhCCCHHHHHHHHHH
Confidence 999999999998754
No 254
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=5e-33 Score=311.20 Aligned_cols=271 Identities=22% Similarity=0.289 Sum_probs=193.8
Q ss_pred Cc-eEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 807 SL-SSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 807 ~y-~i~~~LG~GsfG~Vy~a~~------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+| ++.+.||+|+||+||++.+ .+..+++|+..... ....... +.+|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~ 76 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC---GQQNTSG----WKKEINILKTLYHENIVKYKGCCS 76 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc---ChHHHHH----HHHHHHHHHhCCCCCEeeEEEEEe
Confidence 45 8999999999999998764 24567887754321 1122233 378999999999999999999876
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.... ...++||||+++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||+||
T Consensus 77 ~~~~------------~~~~lv~e~~~~~~l~~~~~~------~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Ni 138 (283)
T cd05080 77 EQGG------------KGLQLIMEYVPLGSLRDYLPK------HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNV 138 (283)
T ss_pred cCCC------------ceEEEEecCCCCCCHHHHHHH------cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheE
Confidence 5321 145899999999999999875 2599999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.++|+|||++.......... .......++..|+|||++.+ ..++.++||||||+++
T Consensus 139 li~~~-------~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~~PE~~~~----~~~~~~~Di~slG~~l 200 (283)
T cd05080 139 LLDND-------RLVKIGDFGLAKAVPEGHEYY-------RVREDGDSPVFWYAVECLKE----NKFSYASDVWSFGVTL 200 (283)
T ss_pred EEcCC-------CcEEEeecccccccCCcchhh-------ccCCCCCCCceeeCHhHhcc----cCCCcccccHHHHHHH
Confidence 99887 789999999987654321110 01112235677999999875 4578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|..||...... ....+.............. ....... +......+..+.+++.+||+.||++|
T Consensus 201 ~el~tg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~~~~li~~cl~~~p~~R 268 (283)
T cd05080 201 YELLTHCDSKQSPPKK-FEEMIGPKQGQMTVVRLIE--------LLERGMR---LPCPKNCPQEVYILMKNCWETEAKFR 268 (283)
T ss_pred HHHHhCCCCCCCCcch-hhhhhcccccccchhhhhh--------hhhcCCC---CCCCCCCCHHHHHHHHHHhccChhhC
Confidence 9999999998653221 1111111000000000000 0000000 00112456789999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 001143 1120 PTAGDLYEMFVAR 1132 (1141)
Q Consensus 1120 PSa~ElL~~L~~~ 1132 (1141)
||++++++.+...
T Consensus 269 ps~~~i~~~l~~~ 281 (283)
T cd05080 269 PTFRSLIPILKEM 281 (283)
T ss_pred CCHHHHHHHHHHh
Confidence 9999999987654
No 255
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.6e-33 Score=303.21 Aligned_cols=247 Identities=26% Similarity=0.385 Sum_probs=191.1
Q ss_pred eeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGN 890 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~ 890 (1141)
++||+|+||.||+|... +..+++|+.. ... ...... .+.+|+.++++++||||+++++++.....
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~--~~~-~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~~------- 66 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCK--EDL-PQELKI----KFLSEARILKQYDHPNIVKLIGVCTQRQP------- 66 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecC--CcC-CHHHHH----HHHHHHHHHHhCCCCCcCeEEEEEecCCc-------
Confidence 47999999999999864 4557777643 211 122222 34789999999999999999999876543
Q ss_pred CccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCC
Q 001143 891 PEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADG 970 (1141)
Q Consensus 891 ~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~ 970 (1141)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++.+
T Consensus 67 -------~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~------ 129 (250)
T cd05085 67 -------IYIVMELVPGGDFLSFLRKK----KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGEN------ 129 (250)
T ss_pred -------cEEEEECCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCC------
Confidence 39999999999999998651 2358899999999999999999999999999999999999877
Q ss_pred CCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 001143 971 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPY 1049 (1141)
Q Consensus 971 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf 1049 (1141)
+.+||+|||++........ .......+++.|+|||++.. ..++.++||||||+++|+|++ |..||
T Consensus 130 -~~~~l~d~g~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~ll~~~~~~g~~p~ 195 (250)
T cd05085 130 -NVLKISDFGMSRQEDDGIY---------SSSGLKQIPIKWTAPEALNY----GRYSSESDVWSYGILLWETFSLGVCPY 195 (250)
T ss_pred -CeEEECCCccceecccccc---------ccCCCCCCcccccCHHHhcc----CCCCchhHHHHHHHHHHHHhcCCCCCC
Confidence 7899999999865332110 01112234677999999875 457889999999999999998 99999
Q ss_pred CCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 001143 1050 MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF 1129 (1141)
Q Consensus 1050 ~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L 1129 (1141)
...........+..+.....+ ...+..+.+++.+||..+|.+||++.++++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l 248 (250)
T cd05085 196 PGMTNQQAREQVEKGYRMSCP---------------------------QKCPDDVYKVMQRCWDYKPENRPKFSELQKEL 248 (250)
T ss_pred CCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcccCcccCCCHHHHHHHh
Confidence 877666555554433221111 13456799999999999999999999999876
Q ss_pred H
Q 001143 1130 V 1130 (1141)
Q Consensus 1130 ~ 1130 (1141)
.
T Consensus 249 ~ 249 (250)
T cd05085 249 A 249 (250)
T ss_pred c
Confidence 3
No 256
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.1e-33 Score=316.02 Aligned_cols=301 Identities=19% Similarity=0.207 Sum_probs=206.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+++|++.++||+|+||.||+|.+. +..+++|+........ ..... +.+|++++++++||||+++++++.+
T Consensus 5 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~ 78 (311)
T cd07866 5 SKLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD--GFPIT----ALREIKILKKLKHPNVVPLIDMAVE 78 (311)
T ss_pred cccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC--Ccchh----HHHHHHHHHhcCCCCccchhhheec
Confidence 34789999999999999999999984 5567777654332211 11112 2689999999999999999998765
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.... ........++||||+. ++|...+.. ....+++..+..++.||++||.|||++||+||||||+||+
T Consensus 79 ~~~~------~~~~~~~~~lv~~~~~-~~l~~~~~~----~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil 147 (311)
T cd07866 79 RPDK------SKRKRGSVYMVTPYMD-HDLSGLLEN----PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANIL 147 (311)
T ss_pred cccc------ccccCceEEEEEecCC-cCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 4321 0112336799999997 577777654 2346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeecccccccccccccccccc-CCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH-RGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~-~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
++.+ +.++|+|||++.............. ..........+++.|+|||.+.+ ...++.++|||||||++
T Consensus 148 ~~~~-------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~il 217 (311)
T cd07866 148 IDNQ-------GILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG---ERRYTTAVDIWGIGCVF 217 (311)
T ss_pred ECCC-------CCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhC---CCccCchhHhHHHHHHH
Confidence 9887 7899999999976543221110000 00111223457889999999865 23578899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhh---ccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL---GSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|+|++|+.||.+.+.......+........+..+... ........ ..................+.+++.+||..||
T Consensus 218 ~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p 296 (311)
T cd07866 218 AEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHS-FTNYPRTLEERFGKLGPEGLDLLSKLLSLDP 296 (311)
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhccccccccc-CCCCCccHHHHcccCChhHHHHHHHHcccCc
Confidence 9999999999877766555544222111111111100 00000000 0000000000111334678999999999999
Q ss_pred CCCCCHHHHHHHHHh
Q 001143 1117 TERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~ 1131 (1141)
.+|||+.|++.|+||
T Consensus 297 ~~R~t~~ell~~~~f 311 (311)
T cd07866 297 YKRLTASDALEHPYF 311 (311)
T ss_pred ccCcCHHHHhcCCCC
Confidence 999999999999986
No 257
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=8.2e-33 Score=310.57 Aligned_cols=266 Identities=29% Similarity=0.438 Sum_probs=201.5
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|+..++||.|++|.||+|.+. +..+++|+.... .. .... ..+.+|++++++++||||+++++++.....
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~--~~-~~~~----~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 73 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTD--PN-PDLQ----KQILRELEINKSCKSPYIVKYYGAFLDESS 73 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecC--Cc-hHHH----HHHHHHHHHHHhCCCCCeeeeeeEEEccCC
Confidence 36889999999999999999984 566777765432 11 1222 234789999999999999999999865321
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
...++||||+++++|.+++..... ....+++..+..++.||+.||.|||+.|++|+||+|+||+++.
T Consensus 74 ------------~~~~lv~e~~~~~~L~~~l~~~~~-~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~ 140 (287)
T cd06621 74 ------------SSIGIAMEYCEGGSLDSIYKKVKK-RGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTR 140 (287)
T ss_pred ------------CeEEEEEEecCCCCHHHHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEec
Confidence 246999999999999998875433 2346899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||++....... .....++..|+|||.+.+ ..++.++|||||||++|+|+
T Consensus 141 ~-------~~~~l~dfg~~~~~~~~~------------~~~~~~~~~y~~pE~~~~----~~~~~~~Dv~slG~il~~l~ 197 (287)
T cd06621 141 K-------GQVKLCDFGVSGELVNSL------------AGTFTGTSFYMAPERIQG----KPYSITSDVWSLGLTLLEVA 197 (287)
T ss_pred C-------CeEEEeeccccccccccc------------cccccCCccccCHHHhcC----CCCCchhhHHHHHHHHHHHH
Confidence 7 789999999986543211 112347888999999875 46788999999999999999
Q ss_pred hCCCCCCCCC-----HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1044 TLQVPYMGLS-----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1044 TGk~Pf~~~~-----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|+.||.... ..+....+.....+.+... +......++.+.+++.+||..||.+
T Consensus 198 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~li~~~l~~~p~~ 256 (287)
T cd06621 198 QNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDE---------------------PGNGIKWSEEFKDFIKQCLEKDPTR 256 (287)
T ss_pred hCCCCCCcccCCCCChHHHHHHHhcCCchhhccC---------------------CCCCCchHHHHHHHHHHHcCCCccc
Confidence 9999997542 2223333222111111100 0000134567999999999999999
Q ss_pred CCCHHHHHHHHHhhcCC
Q 001143 1119 RPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~s 1135 (1141)
|||+.|+++|+|++...
T Consensus 257 Rpt~~eil~~~~~~~~~ 273 (287)
T cd06621 257 RPTPWDMLEHPWIKAQM 273 (287)
T ss_pred CCCHHHHHhCccccccc
Confidence 99999999999996543
No 258
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=5.9e-33 Score=309.86 Aligned_cols=262 Identities=24% Similarity=0.331 Sum_probs=201.5
Q ss_pred CCCceEeeeecccCceEEEEEEECC------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
-++|++.+.||+|+||.||+|.+.. ..+++|+. .. .......+.+ .+|+.++++++||||+++++++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~--~~-~~~~~~~~~~----~~e~~~l~~l~h~ni~~~~~~~ 77 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTV--KD-HASEIQVTLL----LQESCLLYGLSHQNILPILHVC 77 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEc--cC-CCCHHHHHHH----HHHHHHHHhCCCCCCCeEEEEE
Confidence 4679999999999999999999754 45555553 22 1223333333 7899999999999999999987
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 955 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~---~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLK 955 (1141)
..... ..++++||+++++|.+++...... ....+++..+..++.||+.||+|||+++++|||||
T Consensus 78 ~~~~~-------------~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~ 144 (280)
T cd05043 78 IEDGE-------------PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIA 144 (280)
T ss_pred ecCCC-------------CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccC
Confidence 65321 248999999999999999763221 11468999999999999999999999999999999
Q ss_pred CCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1035 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1035 (1141)
|+||+++.+ +.+||+|||+++.+....... ......++..|+|||++.+ ..++.++|||||
T Consensus 145 p~nil~~~~-------~~~kl~d~g~~~~~~~~~~~~--------~~~~~~~~~~y~apE~~~~----~~~~~~~Di~sl 205 (280)
T cd05043 145 ARNCVIDEE-------LQVKITDNALSRDLFPMDYHC--------LGDNENRPVKWMALESLVN----KEYSSASDVWSF 205 (280)
T ss_pred HhhEEEcCC-------CcEEECCCCCcccccCCceEE--------eCCCCCcchhccCHHHHhc----CCCCchhhHHHh
Confidence 999999877 789999999997653321110 0112235778999999876 467899999999
Q ss_pred HHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 001143 1036 GCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE 1114 (1141)
Q Consensus 1036 GviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~ 1114 (1141)
||++||+++ |+.||......+....+..+..+... ..+++++.+++.+||..
T Consensus 206 G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~ 258 (280)
T cd05043 206 GVLLWELMTLGQTPYVEIDPFEMAAYLKDGYRLAQP---------------------------INCPDELFAVMACCWAL 258 (280)
T ss_pred HHHHHHHhcCCCCCcCcCCHHHHHHHHHcCCCCCCC---------------------------CcCCHHHHHHHHHHcCC
Confidence 999999999 99999877766655554433221110 13456789999999999
Q ss_pred CCCCCCCHHHHHHHHHhh
Q 001143 1115 NPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1115 DP~~RPSa~ElL~~L~~~ 1132 (1141)
||++|||+.++++.+...
T Consensus 259 ~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 259 DPEERPSFSQLVQCLTDF 276 (280)
T ss_pred ChhhCCCHHHHHHHHHHH
Confidence 999999999999988654
No 259
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=4.2e-33 Score=311.46 Aligned_cols=247 Identities=21% Similarity=0.346 Sum_probs=181.3
Q ss_pred eecccCceEEEEEEEC------------------------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC
Q 001143 813 EAGKSVSSSLFRCKFG------------------------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH 868 (1141)
Q Consensus 813 ~LG~GsfG~Vy~a~~~------------------------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H 868 (1141)
.||+|+||.||+|.+. ...+.|+++.++.. ... ....+.+|+.+++.++|
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~--~~~----~~~~~~~~~~~~~~l~h 75 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS--HRD----IALAFFETASLMSQVSH 75 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH--HHH----HHHHHHHHHHHHhcCCC
Confidence 6999999999999742 11122333333211 111 12234788999999999
Q ss_pred CCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 001143 869 SCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH 948 (1141)
Q Consensus 869 pNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g 948 (1141)
|||+++++++..... .++||||+++++|..++.. ....+++..+..++.||+.||+|||++|
T Consensus 76 ~niv~~~~~~~~~~~--------------~~lv~ey~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ 137 (274)
T cd05076 76 IHLAFVHGVCVRGSE--------------NIMVEEFVEHGPLDVCLRK----EKGRVPVAWKITVAQQLASALSYLEDKN 137 (274)
T ss_pred CCeeeEEEEEEeCCc--------------eEEEEecCCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999886553 3999999999999999864 2346899999999999999999999999
Q ss_pred ccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001143 949 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1028 (1141)
Q Consensus 949 IvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1028 (1141)
|+||||||+|||++..+........+|++|||.+...... ....++..|+|||.+.+ ...++.
T Consensus 138 iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~--------------~~~~~~~~~~aPe~~~~---~~~~~~ 200 (274)
T cd05076 138 LVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSR--------------EERVERIPWIAPECVPG---GNSLST 200 (274)
T ss_pred ccCCCCCcccEEEeccCcccCccceeeecCCccccccccc--------------cccccCCcccCchhhcC---CCCCCc
Confidence 9999999999999865321222245899999987543211 12247788999998865 245789
Q ss_pred hhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHH
Q 001143 1029 EVDIWSYGCLLLELL-TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1107 (1141)
Q Consensus 1029 ksDVWSLGviL~ELL-TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1107 (1141)
++|||||||++|||+ +|+.||......+....+..... .+ . .....+.++
T Consensus 201 ~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~--~~----------------------~-----~~~~~~~~l 251 (274)
T cd05076 201 AADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHR--LP----------------------E-----PSCKELATL 251 (274)
T ss_pred HHHHHHHHHHHHHHHhCCCCCccccChHHHHHHHHhccC--CC----------------------C-----CCChHHHHH
Confidence 999999999999985 69999976554443222211100 00 0 123458999
Q ss_pred HHHhcccCCCCCCCHHHHHHHH
Q 001143 1108 FRRCTEENPTERPTAGDLYEMF 1129 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L 1129 (1141)
+.+||+.+|++|||+.++++++
T Consensus 252 i~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 252 ISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHcccChhhCcCHHHHHHhh
Confidence 9999999999999999999876
No 260
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=4.3e-33 Score=315.82 Aligned_cols=268 Identities=23% Similarity=0.275 Sum_probs=201.7
Q ss_pred CCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|.+.. ..+++|..... .. ........+.+|+.+++.++||||+++++.+....
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~--~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 74 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQ--NL---ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR- 74 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehh--hh---hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC-
Confidence 368999999999999999999854 55777764322 11 11111123478999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+.++||||++|++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.
T Consensus 75 -------------~~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~ 136 (305)
T cd05609 75 -------------HLCMVMEYVEGGDCATLLKN-----IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITS 136 (305)
T ss_pred -------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECC
Confidence 34999999999999999976 246899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeecccccccccccccccc-----ccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCI-----AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~-----~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
+ +.+||+|||.++........... ............++..|+|||.+.+ ..++.++|||||||+
T Consensus 137 ~-------~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~v 205 (305)
T cd05609 137 M-------GHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR----QGYGKPVDWWAMGII 205 (305)
T ss_pred C-------CCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccC----CCCCchhhHHHHHHH
Confidence 7 78999999998642111000000 0000001112357889999999875 467899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|+|++|..||.+....++...+.....+... .....+..+.+++.+||+.||++
T Consensus 206 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~li~~~l~~~P~~ 260 (305)
T cd05609 206 LYEFLVGCVPFFGDTPEELFGQVISDDIEWPE-------------------------GDEALPADAQDLISRLLRQNPLE 260 (305)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhcccCCCC-------------------------ccccCCHHHHHHHHHHhccChhh
Confidence 99999999999877666665554433211100 00134567899999999999999
Q ss_pred CCC---HHHHHHHHHhhc
Q 001143 1119 RPT---AGDLYEMFVART 1133 (1141)
Q Consensus 1119 RPS---a~ElL~~L~~~~ 1133 (1141)
||+ +.++++|+|+..
T Consensus 261 R~~~~~~~~ll~~~~~~~ 278 (305)
T cd05609 261 RLGTGGAFEVKQHRFFLG 278 (305)
T ss_pred ccCccCHHHHHhCccccC
Confidence 998 799999999854
No 261
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=7.7e-33 Score=305.84 Aligned_cols=252 Identities=22% Similarity=0.390 Sum_probs=197.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
-++|++.++||+|+||.||+|.+. +..+++|.... .....+.+ .+|+.++++++|+||+++++++.. .
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~-----~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~-~- 73 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKP-----GSMSVEAF----LAEANVMKTLQHDKLVKLHAVVTK-E- 73 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCC-----ChhHHHHH----HHHHHHHHhcCCCCcceEEEEEcC-C-
Confidence 467899999999999999999874 44567765331 11222333 789999999999999999998765 2
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. .....+++..+..++.||+.||.|||+.|++||||||+||+++.
T Consensus 74 -------------~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~ 137 (260)
T cd05073 74 -------------PIYIITEFMAKGSLLDFLKS---DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSA 137 (260)
T ss_pred -------------CeEEEEEeCCCCcHHHHHHh---CCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcC
Confidence 24899999999999999976 22346888999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.+......... ......++..|+|||++.. ..++.++|||||||++|+|+
T Consensus 138 ~-------~~~~l~d~~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~~l~~l~ 197 (260)
T cd05073 138 S-------LVCKIADFGLARVIEDNEYT---------AREGAKFPIKWTAPEAINF----GSFTIKSDVWSFGILLMEIV 197 (260)
T ss_pred C-------CcEEECCCcceeeccCCCcc---------cccCCcccccccCHhHhcc----CCcCccccchHHHHHHHHHH
Confidence 7 78999999998755321111 1112235677999999875 45788999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |..||.+.+..+....+..+...... ...+.++.+++.+||+.+|++||++
T Consensus 198 t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~Rp~~ 250 (260)
T cd05073 198 TYGRIPYPGMSNPEVIRALERGYRMPRP---------------------------ENCPEELYNIMMRCWKNRPEERPTF 250 (260)
T ss_pred hcCCCCCCCCCHHHHHHHHhCCCCCCCc---------------------------ccCCHHHHHHHHHHcccCcccCcCH
Confidence 9 99999877666555555433221111 1345679999999999999999999
Q ss_pred HHHHHHHH
Q 001143 1123 GDLYEMFV 1130 (1141)
Q Consensus 1123 ~ElL~~L~ 1130 (1141)
.++++.|.
T Consensus 251 ~~l~~~L~ 258 (260)
T cd05073 251 EYIQSVLD 258 (260)
T ss_pred HHHHHHHh
Confidence 99998764
No 262
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-35 Score=325.48 Aligned_cols=344 Identities=22% Similarity=0.268 Sum_probs=249.7
Q ss_pred hhhhhHHHHHHhhhccCCCCcccccccccc-cCCCCcceeEEeeC--ChhhhhhhhhcCCCCCCCCCCchhhhhcccccc
Q 001143 707 VCRHRAVLLKYLCDRVEPPVPCELVRGYLD-FQPHAWNTILVKKG--DSWIRMIVDACRPHDIREEADPEYFIRYIPLYR 783 (1141)
Q Consensus 707 ~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 783 (1141)
.++-|.++-.+|....-..+||=-.++..- |+.|-... +.++ ....+.+.+.++..++....+..||.++..|.+
T Consensus 99 ~~~~~~i~~~~l~~~~~~~~~~~s~~~~v~~~~~~l~~~--~~~~lf~~~~~~~~~~L~~~pF~~f~~S~yf~rFlQWK~ 176 (591)
T KOG0986|consen 99 KDKARQILDAYLMKELLACLPQFSSKDLVTHVQEHLLEK--PPKDLFQPLARAICAYLRGDPFQEFLESDYFTRFLQWKW 176 (591)
T ss_pred hhhHHHHHHHHhhccccccCCCcchhhhhHHHhhhcccc--CchhhhHHHHHHHHHHhccchHhHhHHHHHHHHHHHHHH
Confidence 356677777777766544444322111111 11111111 0111 122455666778888999999999999988888
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHH
Q 001143 784 TIAPFSTESDHSPCSGLDPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR 861 (1141)
Q Consensus 784 ~~~~~~~~~~~~~~~~~~~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~ 861 (1141)
. +..+.+-+.|+..++||+|+||.||-+.. ++..+|.|. +++...... .-+...+.|-.
T Consensus 177 l--------------E~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKk--L~KKRiKkr---~ge~maLnEk~ 237 (591)
T KOG0986|consen 177 L--------------ELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKK--LDKKRIKKR---KGETMALNEKQ 237 (591)
T ss_pred H--------------HhhhccccceeeeEEEecccccceeEEEEecchhhHHHHH--HHHHHHHHh---hhhHHhhHHHH
Confidence 6 33567778889999999999999998875 455555553 322111111 11223478999
Q ss_pred HHhhCCCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 001143 862 MLGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAAL 941 (1141)
Q Consensus 862 iL~~L~HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL 941 (1141)
+|.+++.+.||.+--.|++.+.+ |+||..|.||+|.-+|.+ .+...+++..++.++.+|+.||
T Consensus 238 iL~kV~s~FiVslaYAfeTkd~L--------------ClVLtlMNGGDLkfHiyn---~g~~gF~e~ra~FYAAEi~cGL 300 (591)
T KOG0986|consen 238 ILEKVSSPFIVSLAYAFETKDAL--------------CLVLTLMNGGDLKFHIYN---HGNPGFDEQRARFYAAEIICGL 300 (591)
T ss_pred HHHHhccCcEEEEeeeecCCCce--------------EEEEEeecCCceeEEeec---cCCCCCchHHHHHHHHHHHhhH
Confidence 99999999999988888877654 999999999999999876 4456799999999999999999
Q ss_pred HHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc
Q 001143 942 VELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH 1021 (1141)
Q Consensus 942 ~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1021 (1141)
+|||+.+||+|||||+|||+|+. |+|.|+|+|+|..+..... ....+||.+|||||++..
T Consensus 301 ehlH~~~iVYRDLKPeNILLDd~-------GhvRISDLGLAvei~~g~~-----------~~~rvGT~GYMAPEvl~n-- 360 (591)
T KOG0986|consen 301 EHLHRRRIVYRDLKPENILLDDH-------GHVRISDLGLAVEIPEGKP-----------IRGRVGTVGYMAPEVLQN-- 360 (591)
T ss_pred HHHHhcceeeccCChhheeeccC-------CCeEeeccceEEecCCCCc-----------cccccCcccccCHHHHcC--
Confidence 99999999999999999999988 9999999999987765321 123489999999999987
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhH
Q 001143 1022 KPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1101 (1141)
Q Consensus 1022 ~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1141)
..|+...|+||+||+||||+.|+.||.......-.+.+.+.... .... .+...+
T Consensus 361 --e~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~-------------------~~~e-----y~~kFS 414 (591)
T KOG0986|consen 361 --EVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLE-------------------DPEE-----YSDKFS 414 (591)
T ss_pred --CcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhc-------------------chhh-----cccccC
Confidence 56999999999999999999999999754332222222111000 0000 012567
Q ss_pred HHHHHHHHHhcccCCCCCC-----CHHHHHHHHHhhcC
Q 001143 1102 SFLVDVFRRCTEENPTERP-----TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1102 ~~L~dLI~~cL~~DP~~RP-----Sa~ElL~~L~~~~~ 1134 (1141)
+++++|.+.+|..||.+|. .++++-+|++|+.-
T Consensus 415 ~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l 452 (591)
T KOG0986|consen 415 EEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL 452 (591)
T ss_pred HHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence 7899999999999999995 56799999999864
No 263
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.3e-34 Score=343.75 Aligned_cols=294 Identities=18% Similarity=0.192 Sum_probs=192.0
Q ss_pred CCCceEeeeecccCceEEEEEEECCcc---EEEEEEecc---------cCCCChHHHHHhHHhHHHHHHHHhhCCCCCcc
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSAD---AAAKVRTLK---------VCGSSADEIRNFEYSCLGEVRMLGALRHSCIV 872 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~---vAvKI~~l~---------~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIV 872 (1141)
..+|++.++||+|+||+||+|.+.... .+.|..... ...............+.+|+.++++++|||||
T Consensus 147 ~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 147 LAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 568999999999999999998763211 111100000 00000001111233458999999999999999
Q ss_pred ceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 001143 873 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHR 952 (1141)
Q Consensus 873 kllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHr 952 (1141)
++++++...+. .|+|||++. ++|.+++...............++.|+.||+.||+|||++|||||
T Consensus 227 ~l~~~~~~~~~--------------~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHr 291 (501)
T PHA03210 227 KIEEILRSEAN--------------TYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHR 291 (501)
T ss_pred cEeEEEEECCe--------------eEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecC
Confidence 99999987553 499999996 788887754221112234567788999999999999999999999
Q ss_pred CCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001143 953 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1032 (1141)
Q Consensus 953 DLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1032 (1141)
||||+|||++.+ +.+||+|||+++.+...... ......||+.|+|||++.+ ..++.++||
T Consensus 292 DLKP~NILl~~~-------~~vkL~DFGla~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di 351 (501)
T PHA03210 292 DIKLENIFLNCD-------GKIVLGDFGTAMPFEKEREA---------FDYGWVGTVATNSPEILAG----DGYCEITDI 351 (501)
T ss_pred CCCHHHEEECCC-------CCEEEEeCCCceecCccccc---------ccccccCCcCCCCchhhcC----CCCCcHHHH
Confidence 999999999887 78999999999765432111 1123469999999999876 568899999
Q ss_pred HHHHHHHHHHHhCCCC-CCCC--CH-HHHHHHHHhCCCC--CchhHHhhhccCc-cccccccCCCCCCchhhhhhHHHHH
Q 001143 1033 WSYGCLLLELLTLQVP-YMGL--SE-LEIHDLIQMGKRP--RLTDELEALGSCH-EHEVAQSGSGFEKPEAELETLSFLV 1105 (1141)
Q Consensus 1033 WSLGviL~ELLTGk~P-f~~~--~~-~el~~~I~~~~~p--~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~ 1105 (1141)
|||||++|||++|..+ |... .. .++.+.+...... .+++......... ....................+..+.
T Consensus 352 wSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (501)
T PHA03210 352 WSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFE 431 (501)
T ss_pred HHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHH
Confidence 9999999999998754 4321 22 2233333221111 0110000000000 0000000000000001113456688
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1106 DVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1106 dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
+++.+||++||.+|||+.|++.|+||..
T Consensus 432 ~li~kmL~~DP~~Rpsa~elL~hp~f~~ 459 (501)
T PHA03210 432 YPLVKMLTFDWHLRPGAAELLALPLFSA 459 (501)
T ss_pred HHHHHHhccCcccCcCHHHHhhChhhhc
Confidence 8999999999999999999999999964
No 264
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=7e-33 Score=311.76 Aligned_cols=286 Identities=21% Similarity=0.257 Sum_probs=200.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+++|++.+.||+|++|.||+|.+. +..+++|...... ........ +.+|+.++++++||||+++++++....
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~ 74 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQ--EDEGVPST----AIREISLLKEMQHGNIVRLQDVVHSEK 74 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcc--ccccchHH----HHHHHHHHHhccCCCEeeEEEEEecCC
Confidence 367999999999999999999975 4567777643321 11111122 368999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
+.++||||++ ++|.+++.. .....+++..+..++.||+.||+|||+++|+||||+|+||+++
T Consensus 75 --------------~~~lv~e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~ 136 (294)
T PLN00009 75 --------------RLYLVFEYLD-LDLKKHMDS---SPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLID 136 (294)
T ss_pred --------------eEEEEEeccc-ccHHHHHHh---CCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEE
Confidence 3499999996 688888754 2233468889999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.++ +.+||+|||++........ ......+++.|+|||++.+ ...++.++|||||||++|+|
T Consensus 137 ~~~------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~---~~~~~~~~Dv~slG~i~~~l 197 (294)
T PLN00009 137 RRT------NALKLADFGLARAFGIPVR----------TFTHEVVTLWYRAPEILLG---SRHYSTPVDIWSVGCIFAEM 197 (294)
T ss_pred CCC------CEEEEcccccccccCCCcc----------ccccCceeecccCHHHHhC---CCCCCcHHHHHHHHHHHHHH
Confidence 542 5799999999865432111 1112357889999999865 23577899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccC-CCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSG-SGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+||+.||......+....+.. ...+ ....+............... ............++.+.+++.+||+.+|++||
T Consensus 198 ~tg~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 276 (294)
T PLN00009 198 VNQKPLFPGDSEIDELFKIFRILGTP-NEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRI 276 (294)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCC-ChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCc
Confidence 999999987665544433321 1111 11111000000000000000 00000001124567789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
++.++++|+|+...
T Consensus 277 s~~~~l~~~~~~~~ 290 (294)
T PLN00009 277 TARAALEHEYFKDL 290 (294)
T ss_pred CHHHHhcCchHhHH
Confidence 99999999999753
No 265
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=9.8e-33 Score=305.81 Aligned_cols=257 Identities=21% Similarity=0.338 Sum_probs=197.3
Q ss_pred CCCceEeeeecccCceEEEEEEECC--c---cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS--A---DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~--~---~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
..+|+..+.||+|+||.||+|+... . .+++|. ++... .....+. +.+|+.++++++||||+++++++.
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~--~~~~~-~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~ 76 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKT--LKPGY-TEKQRQD----FLSEASIMGQFSHHNIIRLEGVVT 76 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEe--ccccC-CHHHHHH----HHHHHHHHhcCCCCCeeEEEEEEc
Confidence 3468899999999999999998742 2 345554 33221 1222333 378999999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
..+. .++||||+++++|.+++.. ....+++..+..++.|++.||+|||+.|++||||||+||
T Consensus 77 ~~~~--------------~~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Ni 138 (268)
T cd05063 77 KFKP--------------AMIITEYMENGALDKYLRD----HDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNI 138 (268)
T ss_pred cCCC--------------cEEEEEcCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhE
Confidence 6543 4999999999999999875 224689999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.+||+|||++.......... ........+..|+|||++.. ..++.++|||||||++
T Consensus 139 li~~~-------~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~~PE~~~~----~~~~~~~Dv~slG~il 200 (268)
T cd05063 139 LVNSN-------LECKVSDFGLSRVLEDDPEGT-------YTTSGGKIPIRWTAPEAIAY----RKFTSASDVWSFGIVM 200 (268)
T ss_pred EEcCC-------CcEEECCCccceecccccccc-------eeccCCCcCceecCHHHhhc----CCcChHhHHHHHHHHH
Confidence 99877 789999999987553321110 00011123457999999875 4678999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|||++ |..||......+....+..+...... ...+..+.+++.+||+.||.+
T Consensus 201 ~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~~~~li~~c~~~~p~~ 253 (268)
T cd05063 201 WEVMSFGERPYWDMSNHEVMKAINDGFRLPAP---------------------------MDCPSAVYQLMLQCWQQDRAR 253 (268)
T ss_pred HHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCC---------------------------CCCCHHHHHHHHHHcCCCccc
Confidence 99998 99999876666666665433221110 134567899999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001143 1119 RPTAGDLYEMFVA 1131 (1141)
Q Consensus 1119 RPSa~ElL~~L~~ 1131 (1141)
||++.+|++.+..
T Consensus 254 Rp~~~~i~~~l~~ 266 (268)
T cd05063 254 RPRFVDIVNLLDK 266 (268)
T ss_pred CcCHHHHHHHHHh
Confidence 9999999998754
No 266
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.5e-33 Score=319.37 Aligned_cols=261 Identities=23% Similarity=0.373 Sum_probs=200.5
Q ss_pred CCceEeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 875 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~---------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkll 875 (1141)
.+|++.+.||+|+||.||+|.+.+ ..+++|+.... ......+.+ .+|+.+++++ +||||++++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~----~~E~~~l~~l~~h~~iv~~~ 84 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD---ATDKDLSDL----VSEMEMMKMIGKHKNIINLL 84 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc---cCHHHHHHH----HHHHHHHHhhcCCCCeeeee
Confidence 368999999999999999998621 24566654321 122223333 7899999999 799999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-----------cCCCCCCHHHHHHHHHHHHHHHHHH
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALVEL 944 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-----------~~~~~Ls~~~i~~Ia~QIa~gL~yL 944 (1141)
+++..... .++||||+++++|.+++..... .....+++..+..++.||+.||.||
T Consensus 85 ~~~~~~~~--------------~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~L 150 (334)
T cd05100 85 GACTQDGP--------------LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYL 150 (334)
T ss_pred EEEccCCc--------------eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 99876543 4999999999999999975321 1123588899999999999999999
Q ss_pred HHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC
Q 001143 945 HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN 1024 (1141)
Q Consensus 945 Hs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 1024 (1141)
|++||+||||||+|||++.+ +.+||+|||.++......... ......++..|+|||++.+ .
T Consensus 151 H~~givH~dlkp~Nill~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~ 211 (334)
T cd05100 151 ASQKCIHRDLAARNVLVTED-------NVMKIADFGLARDVHNIDYYK--------KTTNGRLPVKWMAPEALFD----R 211 (334)
T ss_pred HHCCeeccccccceEEEcCC-------CcEEECCcccceecccccccc--------cccCCCcCceEcCHHHhcc----C
Confidence 99999999999999999877 789999999987654321110 0111234567999999876 5
Q ss_pred CCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHH
Q 001143 1025 LYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1103 (1141)
Q Consensus 1025 ~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1141)
.++.++|||||||++|||++ |..||.+.+..+....+.....+..+ ...+..
T Consensus 212 ~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~ 264 (334)
T cd05100 212 VYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKP---------------------------ANCTHE 264 (334)
T ss_pred CcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHH
Confidence 67889999999999999998 88999887776666665443222111 134557
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1104 LVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1104 L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
+.+++.+||+.+|.+||++.|+++++....
T Consensus 265 l~~li~~cl~~~p~~Rps~~ell~~l~~~~ 294 (334)
T cd05100 265 LYMIMRECWHAVPSQRPTFKQLVEDLDRVL 294 (334)
T ss_pred HHHHHHHHcccChhhCcCHHHHHHHHHHHh
Confidence 899999999999999999999999987654
No 267
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=4.5e-33 Score=315.77 Aligned_cols=293 Identities=21% Similarity=0.258 Sum_probs=200.3
Q ss_pred CceEeeeecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.|++.++||+|+||.||+|.+. +..+|+|+....... ...+...+.+|+.++++++||||+++++++.+..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 75 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ-----YTGISQSACREIALLRELKHENVVSLVEVFLEHA 75 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc-----ccCccHHHHHHHHHHHhcCCCCccceEEEEeCCC
Confidence 4889999999999999999984 467888876543210 1111122368999999999999999999987642
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. ...++||||++ ++|.+++..........+++..++.++.||+.||.|||+++|+||||||+||+++
T Consensus 76 ~------------~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~ 142 (316)
T cd07842 76 D------------KSVYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVM 142 (316)
T ss_pred C------------ceEEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEc
Confidence 1 24699999997 5788887654433334789999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.++ ...+.+||+|||++......... ........+++.|+|||++.+ ...++.++|||||||++++|
T Consensus 143 ~~~---~~~~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~~l~~l 209 (316)
T cd07842 143 GEG---PERGVVKIGDLGLARLFNAPLKP-------LADLDPVVVTIWYRAPELLLG---ARHYTKAIDIWAIGCIFAEL 209 (316)
T ss_pred CCC---CccceEEECCCccccccCCCccc-------ccccCCccccccccCHHHHhC---CCCCCcHHHHHHHHHHHHHH
Confidence 721 11288999999998765432210 111223467899999998865 23567899999999999999
Q ss_pred HhCCCCCCCCCHHH---------HHHHH-HhCCCCCchhHHhhhccCcc-ccc--cccCCCCCCch----hhh--hhHHH
Q 001143 1043 LTLQVPYMGLSELE---------IHDLI-QMGKRPRLTDELEALGSCHE-HEV--AQSGSGFEKPE----AEL--ETLSF 1103 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~e---------l~~~I-~~~~~p~l~~~l~~~~~~~~-~~~--~~~~~~~~~~~----~~~--~~~~~ 1103 (1141)
++|+.||.+..... ....+ .....+. ............ ... ........... ... ..+..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (316)
T cd07842 210 LTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPT-EKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQ 288 (316)
T ss_pred HhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCc-hhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHH
Confidence 99999997543221 11111 1111111 110000000000 000 00000000000 011 34567
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1104 LVDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1104 L~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
+.+++.+||++||++|||+.|+++|+||
T Consensus 289 ~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 289 GFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred HHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 8999999999999999999999999986
No 268
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=5.1e-33 Score=305.04 Aligned_cols=254 Identities=29% Similarity=0.430 Sum_probs=198.2
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+|+..+.||+|++|.||+|.+. +..+++|+......... ....+ .+.+|+.+++.++||||+++++++....
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~----~~~~e~~~l~~~~h~~i~~~~~~~~~~~- 75 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVK----QLEQEIALLSKLQHPNIVQYLGTEREED- 75 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHH----HHHHHHHHHHhcCCCCchheeeeEecCC-
Confidence 4778899999999999999984 66788887543321111 12223 3479999999999999999999887654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.+ ...+++..+..++.||+.||.|||+.||+|+||+|+||+++.
T Consensus 76 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~ 137 (258)
T cd06632 76 -------------NLYIFLELVPGGSLAKLLKK-----YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT 137 (258)
T ss_pred -------------eEEEEEEecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence 34999999999999999976 235889999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.+....... ......++..|+|||.+... ..++.++|+|||||++|+|+
T Consensus 138 ~-------~~~kl~d~~~~~~~~~~~-----------~~~~~~~~~~y~~pe~~~~~---~~~~~~~D~~slG~~l~~l~ 196 (258)
T cd06632 138 N-------GVVKLADFGMAKQVVEFS-----------FAKSFKGSPYWMAPEVIAQQ---GGYGLAADIWSLGCTVLEMA 196 (258)
T ss_pred C-------CCEEEccCccceeccccc-----------cccccCCCcceeCHHHhcCC---CCCCchhhhHHHHHHHHHHH
Confidence 7 789999999987643321 11234588999999998651 23789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 TLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+|+.||......+....+.. ...+.+ ....+..+.+++.+||..+|.+||++
T Consensus 197 ~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~li~~~l~~~p~~Rp~~ 249 (258)
T cd06632 197 TGKPPWSQLEGVAAVFKIGRSKELPPI---------------------------PDHLSDEAKDFILKCLQRDPSLRPTA 249 (258)
T ss_pred hCCCCcccCcHHHHHHHHHhcccCCCc---------------------------CCCcCHHHHHHHHHHhhcCcccCcCH
Confidence 99999976554333333221 111111 11345678999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.+++.|+|+
T Consensus 250 ~~~l~~~~~ 258 (258)
T cd06632 250 AELLEHPFV 258 (258)
T ss_pred HHHhcCCCC
Confidence 999999874
No 269
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2e-33 Score=310.17 Aligned_cols=254 Identities=30% Similarity=0.424 Sum_probs=199.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|++|.||+|.+. +..+++|..... .. ....+ .+.+|+.++++++||||+++++.+....
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~-~~~~~----~~~~e~~~l~~~~~~~i~~~~~~~~~~~- 72 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLE--IN-EAIQK----QILRELDILHKCNSPYIVGFYGAFYNNG- 72 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecc--cC-hHHHH----HHHHHHHHHHHCCCCchhhhheeeecCC-
Confidence 36888999999999999999986 556677764332 11 12223 3478999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCeeee
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILID 962 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++... ...+++..+..++.|++.||+|||+ .|++||||||+||+++
T Consensus 73 -------------~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~ 135 (265)
T cd06605 73 -------------DISICMEYMDGGSLDKILKEV----QGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN 135 (265)
T ss_pred -------------EEEEEEEecCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC
Confidence 459999999999999999762 1478999999999999999999999 9999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+........ ....++..|+|||.+.+ ..++.++||||||+++|+|
T Consensus 136 ~~-------~~~~l~d~g~~~~~~~~~~------------~~~~~~~~y~~PE~~~~----~~~~~~~Dv~slG~~l~~l 192 (265)
T cd06605 136 SR-------GQIKLCDFGVSGQLVNSLA------------KTFVGTSSYMAPERIQG----NDYSVKSDIWSLGLSLIEL 192 (265)
T ss_pred CC-------CCEEEeecccchhhHHHHh------------hcccCChhccCHHHHcC----CCCCchhhHHHHHHHHHHH
Confidence 87 7899999999865432110 11457889999999876 4678999999999999999
Q ss_pred HhCCCCCCCCC-----HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1043 LTLQVPYMGLS-----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1043 LTGk~Pf~~~~-----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
++|+.||.... ..+..+.+.....+..+. ...+..+.++|.+||..||+
T Consensus 193 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~~p~ 246 (265)
T cd06605 193 ATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPS--------------------------GKFSPDFQDFVNLCLIKDPR 246 (265)
T ss_pred HhCCCCCCccccccccHHHHHHHHhcCCCCCCCh--------------------------hhcCHHHHHHHHHHcCCCch
Confidence 99999996532 222222322222221111 02556799999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001143 1118 ERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~ 1133 (1141)
+|||+.+++.|+|+..
T Consensus 247 ~Rpt~~~ll~~~~~~~ 262 (265)
T cd06605 247 ERPSYKELLEHPFIKK 262 (265)
T ss_pred hCcCHHHHhhCchhhc
Confidence 9999999999999963
No 270
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=7e-33 Score=314.22 Aligned_cols=259 Identities=24% Similarity=0.357 Sum_probs=196.5
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 874 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 874 (1141)
...++|.+.+.||+|+||.||+|.+. ...+|+|+.+ ... .....+. +.+|+.+++++ +||||+++
T Consensus 32 ~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~--~~~-~~~~~~~----~~~E~~~l~~l~~h~~iv~~ 104 (302)
T cd05055 32 FPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLK--PTA-HSSEREA----LMSELKIMSHLGNHENIVNL 104 (302)
T ss_pred ccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecC--ccC-ChHHHHH----HHHHHHHHHhccCCCCcceE
Confidence 44567999999999999999999852 2245666533 211 1222233 37899999999 79999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 954 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDL 954 (1141)
++++...+. .++||||+++++|.++++. .....+++.++..++.||+.||+|||+++|+|+||
T Consensus 105 ~~~~~~~~~--------------~~lv~e~~~~~~L~~~i~~---~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dl 167 (302)
T cd05055 105 LGACTIGGP--------------ILVITEYCCYGDLLNFLRR---KRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDL 167 (302)
T ss_pred EEEEecCCc--------------eEEEEEcCCCCcHHHHHHh---CCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhh
Confidence 999876543 4999999999999999975 22234899999999999999999999999999999
Q ss_pred CCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001143 955 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1034 (1141)
Q Consensus 955 KP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWS 1034 (1141)
||+||+++.+ +.++|+|||.+..+...... .......++..|+|||.+.+ ..++.++||||
T Consensus 168 kp~Nil~~~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Diws 228 (302)
T cd05055 168 AARNVLLTHG-------KIVKICDFGLARDIMNDSNY--------VVKGNARLPVKWMAPESIFN----CVYTFESDVWS 228 (302)
T ss_pred ccceEEEcCC-------CeEEECCCcccccccCCCce--------eecCCCCcccccCCHhhhcc----CCCCcHhHHHH
Confidence 9999999876 78999999998755332111 01112346788999999876 45789999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHH-HHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001143 1035 YGCLLLELLT-LQVPYMGLSELEIHDL-IQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1112 (1141)
Q Consensus 1035 LGviL~ELLT-Gk~Pf~~~~~~el~~~-I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL 1112 (1141)
|||++|+|++ |..||......+.... +..+..+..+ ...+..+.+++.+||
T Consensus 229 lGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~cl 281 (302)
T cd05055 229 YGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRMAQP---------------------------EHAPAEIYDIMKTCW 281 (302)
T ss_pred HHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHc
Confidence 9999999998 9999987554433322 2222111100 133457999999999
Q ss_pred ccCCCCCCCHHHHHHHHHh
Q 001143 1113 EENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1113 ~~DP~~RPSa~ElL~~L~~ 1131 (1141)
..+|++|||+.|+++.+..
T Consensus 282 ~~~p~~Rpt~~ell~~l~~ 300 (302)
T cd05055 282 DADPLKRPTFKQIVQLIGK 300 (302)
T ss_pred CCCchhCcCHHHHHHHHHh
Confidence 9999999999999998754
No 271
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=5.3e-33 Score=319.80 Aligned_cols=289 Identities=19% Similarity=0.234 Sum_probs=202.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||.||+|.+. +..|++|+.. .... .... ..+.+|+.++++++||||+++++++.....
T Consensus 5 ~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~--~~~~-~~~~----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 77 (336)
T cd07849 5 PRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKIS--PFEH-QTFC----QRTLREIKILRRFKHENIIGILDIIRPPSF 77 (336)
T ss_pred cceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEec--cccc-chhH----HHHHHHHHHHHhCCCCCcCchhheeecccc
Confidence 57999999999999999999874 5567777643 2111 1112 233789999999999999999998765432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. .....++||||++ ++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 78 ~---------~~~~~~lv~e~~~-~~l~~~~~~------~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~ 141 (336)
T cd07849 78 E---------SFNDVYIVQELME-TDLYKLIKT------QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 141 (336)
T ss_pred c---------ccceEEEEehhcc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECC
Confidence 1 1235699999997 688887754 36999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++......... ........||+.|+|||.+.+ ...++.++|||||||++|+|+
T Consensus 142 ~-------~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~DvwslGvil~el~ 204 (336)
T cd07849 142 N-------CDLKICDFGLARIADPEHDH-------TGFLTEYVATRWYRAPEIMLN---SKGYTKAIDIWSVGCILAEML 204 (336)
T ss_pred C-------CCEEECcccceeeccccccc-------cCCcCCcCcCCCccChHHhhC---CCCCCcHHHHHHHHHHHHHHH
Confidence 7 78999999998764332111 011123468999999998754 245788999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|+.||.+.+.......+......................... ..............+.++.+++.+||+.||.+||
T Consensus 205 ~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rp 284 (336)
T cd07849 205 SNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRI 284 (336)
T ss_pred hCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCc
Confidence 9999998765544333332211111111111100000000000 0000000011123467799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
|+.|+++|+|+..-
T Consensus 285 t~~e~l~hp~~~~~ 298 (336)
T cd07849 285 TVEEALAHPYLEQY 298 (336)
T ss_pred CHHHHhcCcccccc
Confidence 99999999999754
No 272
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=3.5e-33 Score=310.95 Aligned_cols=256 Identities=32% Similarity=0.494 Sum_probs=199.7
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC---CCCccceeeeEecC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEMYGHKISS 881 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~---HpNIVkllg~~~~~ 881 (1141)
.|++.+.||+|+||.||+|.+. +..+++|+..... .....+.+ .+|+.++++++ |||++++++++...
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~----~~e~~~l~~l~~~~~~~vi~~~~~~~~~ 74 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT---PDDDVSDI----QREVALLSQLRQSQPPNITKYYGSYLKG 74 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC---CchhHHHH----HHHHHHHHHhccCCCCCeeeEeeeeeeC
Confidence 4788899999999999999984 5667777654321 12223333 68999999986 99999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+++++|.++++. ..+++..+..++.|++.||.|||+.||+||||+|+||++
T Consensus 75 ~--------------~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i 134 (277)
T cd06917 75 P--------------RLWIIMEYAEGGSVRTLMKA------GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILV 134 (277)
T ss_pred C--------------EEEEEEecCCCCcHHHHHHc------cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEE
Confidence 4 35999999999999999864 268999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.++|+|||.+........ ......|+..|+|||.+.+ ...++.++|||||||++|+
T Consensus 135 ~~~-------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~~l~~ 194 (277)
T cd06917 135 TNT-------GNVKLCDFGVAALLNQNSS----------KRSTFVGTPYWMAPEVITE---GKYYDTKADIWSLGITIYE 194 (277)
T ss_pred cCC-------CCEEEccCCceeecCCCcc----------ccccccCCcceeCHHHhcc---CCccccchhHHHHHHHHHH
Confidence 987 7899999999876543211 1123358899999999864 2456789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|++|..||...........+.....+.+.. ...+.++.+++.+||+.||++||+
T Consensus 195 ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~i~~~l~~~p~~R~~ 248 (277)
T cd06917 195 MATGNPPYSDVDAFRAMMLIPKSKPPRLED--------------------------NGYSKLLREFVAACLDEEPKERLS 248 (277)
T ss_pred HHhCCCCCCCCChhhhhhccccCCCCCCCc--------------------------ccCCHHHHHHHHHHcCCCcccCcC
Confidence 999999998755443332222211111110 024567999999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001143 1122 AGDLYEMFVARTSS 1135 (1141)
Q Consensus 1122 a~ElL~~L~~~~~s 1135 (1141)
+.++++|.|++...
T Consensus 249 ~~~il~~~~~~~~~ 262 (277)
T cd06917 249 AEELLKSKWIKAHS 262 (277)
T ss_pred HHHHhhChHhhccc
Confidence 99999999997654
No 273
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=4e-33 Score=311.62 Aligned_cols=282 Identities=25% Similarity=0.308 Sum_probs=199.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|++|.||+|.+. +..+++|+.+... .... ....+.+|++++++++||||+++++++...+
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~--~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~- 73 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESE--DDED----VKKTALREVKVLRQLRHENIVNLKEAFRRKG- 73 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhc--cccc----chhHHHHHHHHHHhcCCCCeeehhheEEECC-
Confidence 36899999999999999999985 4567777643321 1111 2233479999999999999999999987644
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||++++.+..++.. ...+++..+..++.||+.||.|||+++++||||+|+||+++.
T Consensus 74 -------------~~~iv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~ 135 (288)
T cd07833 74 -------------RLYLVFEYVERTLLELLEAS-----PGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSE 135 (288)
T ss_pred -------------EEEEEEecCCCCHHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECC
Confidence 35999999997666655543 245899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.+......... ......++..|+|||++.+. ..++.++||||||+++|+|+
T Consensus 136 ~-------~~~kl~d~g~~~~~~~~~~~---------~~~~~~~~~~~~~PE~~~~~---~~~~~~~Dv~slG~~l~~l~ 196 (288)
T cd07833 136 S-------GVLKLCDFGFARALRARPAS---------PLTDYVATRWYRAPELLVGD---TNYGKPVDVWAIGCIMAELL 196 (288)
T ss_pred C-------CCEEEEeeecccccCCCccc---------cccCcccccCCcCCchhcCC---CCcCchhhHHHHHHHHHHHH
Confidence 7 78999999998765432210 11234578899999998762 26789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC---ccccccccCCCCCCch-hhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---HEHEVAQSGSGFEKPE-AELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|+.||.+....+....+........+......... ................ .....+.++.+++.+||..||++|
T Consensus 197 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R 276 (288)
T cd07833 197 DGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKER 276 (288)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhc
Confidence 999999876655443333221111111100000000 0000000000000000 011236789999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001143 1120 PTAGDLYEMFVA 1131 (1141)
Q Consensus 1120 PSa~ElL~~L~~ 1131 (1141)
|+++++++|+||
T Consensus 277 ps~~~il~~~~f 288 (288)
T cd07833 277 LTCDELLQHPYF 288 (288)
T ss_pred ccHHHHhcCCCC
Confidence 999999999886
No 274
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=4.8e-33 Score=328.25 Aligned_cols=261 Identities=24% Similarity=0.330 Sum_probs=198.7
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCcccee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMY 875 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkll 875 (1141)
+.++|.+.++||+|+||.||+|++.+ ..||+|+.+.. . .....+. +.+|+.++.++. |||||+++
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~--~-~~~~~~~----~~~E~~~l~~l~~H~niv~~~ 107 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKST--A-RSSEKQA----LMSELKIMSHLGPHLNIVNLL 107 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCC--C-ChhHHHH----HHHHHHHHHhcCCCCCeEEEE
Confidence 34568899999999999999999743 35777775422 1 1222223 479999999997 99999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh------------------------------------
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE------------------------------------ 919 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~------------------------------------ 919 (1141)
+++..... .++||||+++|+|.++++....
T Consensus 108 ~~~~~~~~--------------~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (401)
T cd05107 108 GACTKGGP--------------IYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSE 173 (401)
T ss_pred EEEccCCC--------------cEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhc
Confidence 99876553 3999999999999999975321
Q ss_pred ---------------------------------------------------------cCCCCCCHHHHHHHHHHHHHHHH
Q 001143 920 ---------------------------------------------------------TGEKHVSVKLALFIAQDVAAALV 942 (1141)
Q Consensus 920 ---------------------------------------------------------~~~~~Ls~~~i~~Ia~QIa~gL~ 942 (1141)
.....+++..+..|+.||+.||+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~ 253 (401)
T cd05107 174 SDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGME 253 (401)
T ss_pred cCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 01134778889999999999999
Q ss_pred HHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001143 943 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1022 (1141)
Q Consensus 943 yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1022 (1141)
|||+.+|+||||||+|||++.+ +.+||+|||+++.+...... .......++..|+|||.+.+
T Consensus 254 ~LH~~~ivHrdlkp~NiLl~~~-------~~~kL~DfGla~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~--- 315 (401)
T cd05107 254 FLASKNCVHRDLAARNVLICEG-------KLVKICDFGLARDIMRDSNY--------ISKGSTFLPLKWMAPESIFN--- 315 (401)
T ss_pred HHhcCCcCcccCCcceEEEeCC-------CEEEEEecCcceeccccccc--------ccCCCcCCCCceeChHHhcC---
Confidence 9999999999999999999876 78999999999754321110 01112346788999999875
Q ss_pred CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhh
Q 001143 1023 PNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET 1100 (1141)
Q Consensus 1023 ~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1100 (1141)
..++.++|||||||++|||++ |..||......+.. ..+..+.++..+ ..+
T Consensus 316 -~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~p---------------------------~~~ 367 (401)
T cd05107 316 -NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRMAKP---------------------------AHA 367 (401)
T ss_pred -CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCCCCC---------------------------CCC
Confidence 567899999999999999998 89999765444432 333333221111 134
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1101 LSFLVDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1101 ~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
+.++.+++.+||..+|.+||++++|++.+..
T Consensus 368 ~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 368 SDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred CHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 5679999999999999999999999998764
No 275
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=7.1e-33 Score=307.40 Aligned_cols=246 Identities=21% Similarity=0.368 Sum_probs=181.7
Q ss_pred eeecccCceEEEEEEECCc--------------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 812 DEAGKSVSSSLFRCKFGSA--------------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~~--------------~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
+.||+|+||.||+|++... .+++|+ +... ... ....+..|+.++..++||||++++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~--~~~~--~~~----~~~~~~~~~~~l~~l~hp~iv~~~~~ 72 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKV--LDPS--HRD----ISLAFFETASMMRQVSHKHIVLLYGV 72 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEee--cChh--hhh----HHHHHHHHHHHHHhCCCCCEeeEEEE
Confidence 4689999999999985321 244444 2211 111 12234788999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+...... ++||||+++++|..++.. ....+++..+..++.||+.||+|||++||+||||||+
T Consensus 73 ~~~~~~~--------------~lv~e~~~~~~l~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~ 134 (262)
T cd05077 73 CVRDVEN--------------IMVEEFVEFGPLDLFMHR----KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTK 134 (262)
T ss_pred EecCCCC--------------EEEEecccCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcc
Confidence 8765433 899999999999988764 2246899999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||++.++........++++|||.+..... .....++..|+|||.+.. ...++.++|||||||
T Consensus 135 Nill~~~~~~~~~~~~~~l~d~g~~~~~~~--------------~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~ 197 (262)
T cd05077 135 NILLAREGIDGECGPFIKLSDPGIPITVLS--------------RQECVERIPWIAPECVED---SKNLSIAADKWSFGT 197 (262)
T ss_pred cEEEecCCccCCCCceeEeCCCCCCccccC--------------cccccccccccChhhhcC---CCCCCchhHHHHHHH
Confidence 999986532222224589999998864322 113457889999998863 245788999999999
Q ss_pred HHHHHH-hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELL-TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELL-TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|||+ +|..||......+..... ...... .. ....++.+|+.+||+.||
T Consensus 198 ~l~el~~~~~~p~~~~~~~~~~~~~-~~~~~~-----------------------~~-----~~~~~~~~li~~cl~~dp 248 (262)
T cd05077 198 TLWEICYNGEIPLKDKTLAEKERFY-EGQCML-----------------------VT-----PSCKELADLMTHCMNYDP 248 (262)
T ss_pred HHHHHHhCCCCCCCCcchhHHHHHH-hcCccC-----------------------CC-----CChHHHHHHHHHHcCCCh
Confidence 999998 588888764433322111 111000 00 234568999999999999
Q ss_pred CCCCCHHHHHHHH
Q 001143 1117 TERPTAGDLYEMF 1129 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L 1129 (1141)
.+||++.+|++++
T Consensus 249 ~~Rp~~~~il~~~ 261 (262)
T cd05077 249 NQRPFFRAIMRDI 261 (262)
T ss_pred hhCcCHHHHHHhc
Confidence 9999999999875
No 276
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=322.28 Aligned_cols=255 Identities=24% Similarity=0.423 Sum_probs=215.3
Q ss_pred CceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
+....++||-|.||.||.|.|+.-...|+|+.++.. ..+.++| ++|+.+|+.++|||+|+++|+|..+..+
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED---tMeveEF----LkEAAvMKeikHpNLVqLLGVCT~EpPF-- 338 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTHEPPF-- 338 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc---chhHHHH----HHHHHHHHhhcCccHHHHhhhhccCCCe--
Confidence 357889999999999999999887777777666642 3445566 8999999999999999999999876544
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
|||+|||..|+|.++++.+ ....++.-..+.++.||..|++||..+++|||||-+.|.|+.++
T Consensus 339 ------------YIiTEfM~yGNLLdYLRec---nr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEn-- 401 (1157)
T KOG4278|consen 339 ------------YIITEFMCYGNLLDYLREC---NRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN-- 401 (1157)
T ss_pred ------------EEEEecccCccHHHHHHHh---chhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhcccccc--
Confidence 9999999999999999884 33457888889999999999999999999999999999999988
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-C
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-L 1045 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-G 1045 (1141)
..||++|||+++.+.....+ ++.+ .--.+.|.|||-+.. ..++.|+|||+|||+|||+.| |
T Consensus 402 -----hiVKvADFGLsRlMtgDTYT---AHAG------AKFPIKWTAPEsLAy----NtFSiKSDVWAFGVLLWEIATYG 463 (1157)
T KOG4278|consen 402 -----HIVKVADFGLSRLMTGDTYT---AHAG------AKFPIKWTAPESLAY----NTFSIKSDVWAFGVLLWEIATYG 463 (1157)
T ss_pred -----ceEEeeccchhhhhcCCcee---cccC------ccCcccccCcccccc----cccccchhhHHHHHHHHHHHhcC
Confidence 78999999999988765433 2222 224567999999876 678899999999999999999 9
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
..||.+.+..+++..+..+.+..-+ ..|++.+.+|++.||++.|.+||+++|+
T Consensus 464 MsPYPGidlSqVY~LLEkgyRM~~P---------------------------eGCPpkVYeLMraCW~WsPsDRPsFaei 516 (1157)
T KOG4278|consen 464 MSPYPGIDLSQVYGLLEKGYRMDGP---------------------------EGCPPKVYELMRACWNWSPSDRPSFAEI 516 (1157)
T ss_pred CCCCCCccHHHHHHHHhccccccCC---------------------------CCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence 9999999998999888777654322 1788889999999999999999999999
Q ss_pred HHHHHhh
Q 001143 1126 YEMFVAR 1132 (1141)
Q Consensus 1126 L~~L~~~ 1132 (1141)
-+.++-.
T Consensus 517 HqafEtm 523 (1157)
T KOG4278|consen 517 HQAFETM 523 (1157)
T ss_pred HHHHHHH
Confidence 8776654
No 277
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.5e-33 Score=304.78 Aligned_cols=254 Identities=27% Similarity=0.446 Sum_probs=202.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|++|.||+|.+. +..+++|+..... .. ..... +.+|+..+.+++||||+++++++....
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~--~~-~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~- 72 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDG--DE-EFRKQ----LLRELKTLRSCESPYVVKCYGAFYKEG- 72 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCc--ch-HHHHH----HHHHHHHHHhcCCCCeeeEEEEEccCC-
Confidence 36899999999999999999985 5667777654321 11 22233 479999999999999999999987654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCeeee
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILID 962 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||+|||+ .+++||||+|+||+++
T Consensus 73 -------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~ 134 (264)
T cd06623 73 -------------EISIVLEYMDGGSLADLLKK-----VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN 134 (264)
T ss_pred -------------eEEEEEEecCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC
Confidence 45999999999999999976 2468999999999999999999999 9999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+........ ......++..|+|||.+.. ..++.++||||||+++|+|
T Consensus 135 ~~-------~~~~l~df~~~~~~~~~~~----------~~~~~~~~~~y~~pE~~~~----~~~~~~~Dv~slG~il~~l 193 (264)
T cd06623 135 SK-------GEVKIADFGISKVLENTLD----------QCNTFVGTVTYMSPERIQG----ESYSYAADIWSLGLTLLEC 193 (264)
T ss_pred CC-------CCEEEccCccceecccCCC----------cccceeecccccCHhhhCC----CCCCchhhHHHHHHHHHHH
Confidence 87 7899999999876543211 1113457889999999876 4678999999999999999
Q ss_pred HhCCCCCCCCC---HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhh-hHHHHHHHHHHhcccCCCC
Q 001143 1043 LTLQVPYMGLS---ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE-TLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1043 LTGk~Pf~~~~---~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~dLI~~cL~~DP~~ 1118 (1141)
++|+.||.... ..+....+.....+... .. .+..+.+++.+||..+|++
T Consensus 194 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~l~~li~~~l~~~p~~ 246 (264)
T cd06623 194 ALGKFPFLPPGQPSFFELMQAICDGPPPSLP---------------------------AEEFSPEFRDFISACLQKDPKK 246 (264)
T ss_pred HhCCCCCccccccCHHHHHHHHhcCCCCCCC---------------------------cccCCHHHHHHHHHHccCChhh
Confidence 99999997653 33333333322211111 12 5567999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001143 1119 RPTAGDLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~ 1133 (1141)
||++.++++|+|++.
T Consensus 247 R~~~~~ll~~~~~~~ 261 (264)
T cd06623 247 RPSAAELLQHPFIKK 261 (264)
T ss_pred CCCHHHHHhCHHHHh
Confidence 999999999999864
No 278
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=5.9e-33 Score=305.94 Aligned_cols=261 Identities=30% Similarity=0.474 Sum_probs=200.0
Q ss_pred CceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|+||.||+|.+ .+..+++|+..... ...... ..+..|+.++++++|+||+++++.+....
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~----~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-- 72 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQD--NDPKTI----KEIADEMKVLELLKHPNLVKYYGVEVHRE-- 72 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcc--cchHHH----HHHHHHHHHHHhCCCCChhheeeeEecCC--
Confidence 588999999999999999987 45677888765432 122223 34489999999999999999999876544
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.. ...+++..+..|+.|++.||.|||+.||+|+||+|+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~ 135 (264)
T cd06626 73 ------------KVYIFMEYCSGGTLEELLEH-----GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHN 135 (264)
T ss_pred ------------EEEEEEecCCCCcHHHHHhh-----cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 35999999999999999875 2358899999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||.+........... .......+++.|+|||++.+.. ...++.++||||||+++|+|++
T Consensus 136 -------~~~kl~d~g~~~~~~~~~~~~~------~~~~~~~~~~~~~~PE~~~~~~-~~~~~~~~Dv~s~G~il~~l~~ 201 (264)
T cd06626 136 -------GVIKLGDFGCAVKLKNNTTTMG------EEVQSLAGTPAYMAPEVITGGK-GKGHGRAADIWSLGCVVLEMAT 201 (264)
T ss_pred -------CCEEEcccccccccCCCCCccc------ccccCCcCCcCccChhhccCCC-CCCCCcccchHHHHHHHHHHHh
Confidence 7899999999876543221110 0011245788999999987622 1237889999999999999999
Q ss_pred CCCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 LQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 Gk~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|+.||.... .......+.....+.++.. ...+..+.+++.+||+.+|.+||++.
T Consensus 202 g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~li~~~l~~~p~~R~~~~ 256 (264)
T cd06626 202 GKRPWSELDNEFQIMFHVGAGHKPPIPDS-------------------------LQLSPEGKDFLDRCLESDPKKRPTAS 256 (264)
T ss_pred CCCCccCCcchHHHHHHHhcCCCCCCCcc-------------------------cccCHHHHHHHHHHccCCcccCCCHH
Confidence 999997543 2222223332222222110 13356688999999999999999999
Q ss_pred HHHHHHHh
Q 001143 1124 DLYEMFVA 1131 (1141)
Q Consensus 1124 ElL~~L~~ 1131 (1141)
+++.|+|.
T Consensus 257 ~i~~~~~~ 264 (264)
T cd06626 257 ELLQHPFV 264 (264)
T ss_pred HHhcCCCC
Confidence 99999874
No 279
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=1.4e-32 Score=303.23 Aligned_cols=253 Identities=24% Similarity=0.357 Sum_probs=187.8
Q ss_pred eeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~-----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
+.||+|+||.||+|.+.. ..+++|. .... ......+.+ .+|+.+++.++||||+++++++...+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~--~~~~-~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~~--- 70 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKS--LNRI-TDLEEVEQF----LKEGIIMKDFSHPNVLSLLGICLPSEG--- 70 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEe--cCcc-CCHHHHHHH----HHHHHHHccCCCCCcceEEEEeecCCC---
Confidence 468999999999998632 2355554 3221 122223333 789999999999999999997654221
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
..++||||+++++|.+++... ...+++..+..++.||+.||.|||+.+|+||||||+|||++.+
T Consensus 71 ----------~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~-- 134 (262)
T cd05058 71 ----------SPLVVLPYMKHGDLRNFIRSE----THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDES-- 134 (262)
T ss_pred ----------CcEEEEecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCC--
Confidence 238999999999999999752 2346788889999999999999999999999999999999877
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-C
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-L 1045 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-G 1045 (1141)
+.+||+|||+++......... ........++..|+|||++.+ ..++.++|||||||++|||++ |
T Consensus 135 -----~~~kl~dfg~~~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~el~~~~ 199 (262)
T cd05058 135 -----FTVKVADFGLARDIYDKEYYS------VHNHTGAKLPVKWMALESLQT----QKFTTKSDVWSFGVLLWELMTRG 199 (262)
T ss_pred -----CcEEECCccccccccCCccee------ecccccCcCCccccChhHhcc----CccchHHHHHHHHHHHHHHHcCC
Confidence 789999999987543311100 001112345778999999875 467899999999999999999 5
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
.+||......+....+..+..+..+ ...+..+.+++.+||..+|++||++.++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~cl~~~p~~Rp~~~~i 252 (262)
T cd05058 200 APPYPDVDSFDITVYLLQGRRLLQP---------------------------EYCPDPLYEVMLSCWHPKPEMRPTFSEL 252 (262)
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCCC---------------------------CcCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 6677766655555544433222111 0335578999999999999999999999
Q ss_pred HHHHHhh
Q 001143 1126 YEMFVAR 1132 (1141)
Q Consensus 1126 L~~L~~~ 1132 (1141)
++.+...
T Consensus 253 l~~l~~~ 259 (262)
T cd05058 253 VSRIEQI 259 (262)
T ss_pred HHHHHHH
Confidence 9987653
No 280
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.1e-33 Score=321.27 Aligned_cols=263 Identities=24% Similarity=0.362 Sum_probs=196.1
Q ss_pred CCCceEeeeecccCceEEEEEEE-------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~-------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg 876 (1141)
.++|++.++||+|+||.||+|.+ .+..+|+|+.+... ....... +.+|+.++.++ +||||+++++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~~----~~~E~~~l~~l~~h~niv~~~~ 78 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA---THSEHRA----LMSELKILIHIGHHLNVVNLLG 78 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC---ChHHHHH----HHHHHHHHHhccCCccHhhhcc
Confidence 45799999999999999999985 24567887754221 2222333 37899999999 6899999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc------------------------------------
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------------------------ 920 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~------------------------------------ 920 (1141)
++...+. ..++||||+++|+|.++++.....
T Consensus 79 ~~~~~~~-------------~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (343)
T cd05103 79 ACTKPGG-------------PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQ 145 (343)
T ss_pred eeecCCC-------------ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhcccccccc
Confidence 8765331 348999999999999999752100
Q ss_pred --------------------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeE
Q 001143 921 --------------------------GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVV 974 (1141)
Q Consensus 921 --------------------------~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~v 974 (1141)
....+++..+..++.||+.||+|||++||+||||||+||+++.+ +.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~-------~~~ 218 (343)
T cd05103 146 SSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEN-------NVV 218 (343)
T ss_pred ccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCC-------CcE
Confidence 01247888999999999999999999999999999999999877 789
Q ss_pred EEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 001143 975 KLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLS 1053 (1141)
Q Consensus 975 KL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~ 1053 (1141)
||+|||++......... .......++..|+|||++.+ ..++.++||||||+++|+|++ |..||....
T Consensus 219 kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~el~~~g~~p~~~~~ 286 (343)
T cd05103 219 KICDFGLARDIYKDPDY--------VRKGDARLPLKWMAPETIFD----RVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 286 (343)
T ss_pred EEEecccccccccCcch--------hhcCCCCCCcceECcHHhcC----CCCCchhhHHHHHHHHHHHHHCCCCCCCCcc
Confidence 99999998764321111 01112235678999999875 567899999999999999997 999997643
Q ss_pred HH-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1054 EL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1054 ~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.. +....+..+..+..+. ..+..+.+++..||+.||.+|||+.+|++++...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~ 339 (343)
T cd05103 287 IDEEFCRRLKEGTRMRAPD---------------------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 339 (343)
T ss_pred ccHHHHHHHhccCCCCCCC---------------------------CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 32 2233333222211110 2345689999999999999999999999998764
Q ss_pred c
Q 001143 1133 T 1133 (1141)
Q Consensus 1133 ~ 1133 (1141)
.
T Consensus 340 ~ 340 (343)
T cd05103 340 L 340 (343)
T ss_pred H
Confidence 3
No 281
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=6.6e-33 Score=303.05 Aligned_cols=256 Identities=29% Similarity=0.435 Sum_probs=204.4
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||.|++|.||+|.+. +..+++|+.... .......+. +.+|++++++++|||++++++.+....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~----~~~e~~~l~~l~~~~~~~~~~~~~~~~-- 72 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLS--NMSEKERED----ALNEVKILKKLNHPNIIKYYESFEEKG-- 72 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecc--cCChHHHHH----HHHHHHHHHhcCCCChhheEEEEecCC--
Confidence 5889999999999999999986 566777765432 222233333 378999999999999999999987643
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++..... ....+++..+..++.|++.||.|||++|++|+||+|+||+++.+
T Consensus 73 ------------~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~ 139 (258)
T cd08215 73 ------------KLCIVMEYADGGDLSQKIKKQKK-EGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSN 139 (258)
T ss_pred ------------EEEEEEEecCCCcHHHHHHHhhc-cCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCC
Confidence 45999999999999999986322 23579999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+........ ......|++.|+|||.+.+ ..++.++||||+|+++++|++
T Consensus 140 -------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~y~~pe~~~~----~~~~~~~Dv~slG~~~~~l~~ 198 (258)
T cd08215 140 -------GLVKLGDFGISKVLSSTVD----------LAKTVVGTPYYLSPELCQN----KPYNYKSDIWSLGCVLYELCT 198 (258)
T ss_pred -------CcEEECCccceeecccCcc----------eecceeeeecccChhHhcc----CCCCccccHHHHHHHHHHHHc
Confidence 7899999999876543210 1123458889999999875 457889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||......+....+.....+.++. ..+..+.+++.+||..+|++|||+.+
T Consensus 199 g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~i~~~l~~~p~~Rp~~~~ 251 (258)
T cd08215 199 LKHPFEGENLLELALKILKGQYPPIPS---------------------------QYSSELRNLVSSLLQKDPEERPSIAQ 251 (258)
T ss_pred CCCCCCCCcHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhhCcCHHH
Confidence 999998766665555544333222211 34567899999999999999999999
Q ss_pred HHHHHHh
Q 001143 1125 LYEMFVA 1131 (1141)
Q Consensus 1125 lL~~L~~ 1131 (1141)
+++|+|+
T Consensus 252 ll~~~~~ 258 (258)
T cd08215 252 ILQSPFI 258 (258)
T ss_pred HhcCCCC
Confidence 9999885
No 282
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=8.8e-33 Score=307.92 Aligned_cols=278 Identities=23% Similarity=0.270 Sum_probs=196.5
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~~~ 884 (1141)
|++.++||+|+||.||+|.+. +..+++|..+.. ......... .+|+.++.++. ||||+++++++.+...
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~--~~~~~~~~~-----~~e~~~l~~l~~h~~i~~~~~~~~~~~~- 72 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKH--FKSLEQVNN-----LREIQALRRLSPHPNILRLIEVLFDRKT- 72 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhc--cCCchhhhH-----HHHHHHHhhcCCCCCccceEEEEecCCC-
Confidence 688999999999999999874 566777764322 122222222 47899999885 9999999999876411
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
...++||||++ ++|.+.+... ...+++..+..++.||+.||.|||+.||+||||||+||+++.
T Consensus 73 -----------~~~~lv~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~- 135 (282)
T cd07831 73 -----------GRLALVFELMD-MNLYELIKGR----KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD- 135 (282)
T ss_pred -----------CcEEEEEecCC-ccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-
Confidence 14599999997 6888887651 246899999999999999999999999999999999999975
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||.+..+.... ......++..|+|||++.. ...++.++|||||||++|||++
T Consensus 136 -------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slGv~l~el~~ 194 (282)
T cd07831 136 -------DILKLADFGSCRGIYSKP-----------PYTEYISTRWYRAPECLLT---DGYYGPKMDIWAVGCVFFEILS 194 (282)
T ss_pred -------CCeEEEecccccccccCC-----------CcCCCCCCcccCChhHhhc---CCCCCcchhHHHHHHHHHHHHc
Confidence 479999999987653211 1112357889999998654 2356789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC-ccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-HEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|+.||.+.+..+....+.................. .....................+..+.+++.+||..||++||++.
T Consensus 195 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~ 274 (282)
T cd07831 195 LFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAK 274 (282)
T ss_pred CCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHH
Confidence 99999887766655444322111111100000000 00000000000000011124578899999999999999999999
Q ss_pred HHHHHHHh
Q 001143 1124 DLYEMFVA 1131 (1141)
Q Consensus 1124 ElL~~L~~ 1131 (1141)
++++|+|+
T Consensus 275 ~~l~~~~~ 282 (282)
T cd07831 275 QALRHPYF 282 (282)
T ss_pred HHhhCCCC
Confidence 99999986
No 283
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=7e-33 Score=309.33 Aligned_cols=281 Identities=18% Similarity=0.235 Sum_probs=201.9
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.++||.|++|.||+|++. +..+++|+...... ....+. +.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~~- 72 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAE---EGTPST----AIREISLMKELKHENIVRLHDVIHTENK- 72 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccc---ccchHH----HHHHHHHHHhhcCCCEeeeeeeEeeCCc-
Confidence 5899999999999999999984 55677776543321 111122 3689999999999999999999987553
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.++||||++ ++|.+++.... ....+++..+..++.||+.||.|||+.|++||||||+||+++.+
T Consensus 73 -------------~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~ 136 (284)
T cd07836 73 -------------LMLVFEYMD-KDLKKYMDTHG--VRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKR 136 (284)
T ss_pred -------------EEEEEecCC-ccHHHHHHhcC--CCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCC
Confidence 499999998 58999887522 12468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+........ ......++..|++||++.+ ...++.++|||||||++|+|++
T Consensus 137 -------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~---~~~~~~~~Dv~slG~~l~~l~~ 196 (284)
T cd07836 137 -------GELKLADFGLARAFGIPVN----------TFSNEVVTLWYRAPDVLLG---SRTYSTSIDIWSVGCIMAEMIT 196 (284)
T ss_pred -------CcEEEeecchhhhhcCCcc----------ccccccccccccChHHhcC---CCCCCcHHHHHHHHHHHHHHHh
Confidence 7899999999865432111 1112347889999999865 2356789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcccccc-ccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVA-QSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|+.||.+.+..+....+...........+............ ...............+..+.+++.+||+.||.+||++.
T Consensus 197 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~ 276 (284)
T cd07836 197 GRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAH 276 (284)
T ss_pred CCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHH
Confidence 99999877665555444322211111111111100000000 00000000011123467789999999999999999999
Q ss_pred HHHHHHHh
Q 001143 1124 DLYEMFVA 1131 (1141)
Q Consensus 1124 ElL~~L~~ 1131 (1141)
++++|+||
T Consensus 277 ~~l~~~~f 284 (284)
T cd07836 277 DALQHPWF 284 (284)
T ss_pred HHhcCCCC
Confidence 99999986
No 284
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=6.9e-33 Score=309.35 Aligned_cols=251 Identities=29% Similarity=0.417 Sum_probs=199.2
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|++.++||+|+||.||+|.+. +..+|+|+..... .....+. +.+|+.++.+++||||+++++++.....
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~~~-- 76 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEE---AEDEIED----IQQEITVLSQCDSPYVTKYYGSYLKDTK-- 76 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEecccc---chHHHHH----HHHHHHHHHhcCCCCEeEEEEEEEeCCe--
Confidence 678899999999999999874 4567777643221 1122233 4789999999999999999999986553
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
.++||||+++++|.+++.. ..+++..+..++.|++.|+.|||++|++|+||+|+||+++.+
T Consensus 77 ------------~~lv~e~~~~~~l~~~i~~------~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~- 137 (277)
T cd06641 77 ------------LWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEH- 137 (277)
T ss_pred ------------EEEEEEeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCC-
Confidence 4999999999999999864 358999999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.++|+|||++..+..... ......++..|+|||.+.+ ..++.++|||||||++|+|++|
T Consensus 138 ------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Dv~slG~~l~~l~~g 197 (277)
T cd06641 138 ------GEVKLADFGVAGQLTDTQI----------KRNTFVGTPFWMAPEVIKQ----SAYDSKADIWSLGITAIELAKG 197 (277)
T ss_pred ------CCEEEeecccceecccchh----------hhccccCCccccChhhhcc----CCCCchhhHHHHHHHHHHHHcC
Confidence 7899999999865433110 1112357889999999875 4567899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
..||...........+.....+.+. ...+.++.+++.+||+.+|.+||++.++
T Consensus 198 ~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~Rp~~~~~ 250 (277)
T cd06641 198 EPPHSELHPMKVLFLIPKNNPPTLE---------------------------GNYSKPLKEFVEACLNKEPSFRPTAKEL 250 (277)
T ss_pred CCCCCccchHHHHHHHhcCCCCCCC---------------------------cccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 9999876555444444333222111 1345678999999999999999999999
Q ss_pred HHHHHhhc
Q 001143 1126 YEMFVART 1133 (1141)
Q Consensus 1126 L~~L~~~~ 1133 (1141)
++|+|+..
T Consensus 251 l~~~~~~~ 258 (277)
T cd06641 251 LKHKFIVR 258 (277)
T ss_pred HhCHHHhh
Confidence 99999864
No 285
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.9e-33 Score=311.97 Aligned_cols=266 Identities=21% Similarity=0.289 Sum_probs=194.9
Q ss_pred CCCceEeeeecccCceEEEEEEECC--------------c--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS--------------A--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH 868 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~--------------~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H 868 (1141)
..+|++.++||+|+||.||+|.+.+ . .+++|+.. .. ........ +.+|++++++++|
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~----~~~ei~~l~~l~h 76 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLR--AD-VTKTARND----FLKEIKIMSRLKN 76 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecC--CC-CCHHHHHH----HHHHHHHHHhCCC
Confidence 4589999999999999999987632 2 25555533 21 12222233 4799999999999
Q ss_pred CCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-------cCCCCCCHHHHHHHHHHHHHHH
Q 001143 869 SCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-------TGEKHVSVKLALFIAQDVAAAL 941 (1141)
Q Consensus 869 pNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-------~~~~~Ls~~~i~~Ia~QIa~gL 941 (1141)
|||+++++++..... .++||||+++++|.+++..... .....+++..+..++.|++.||
T Consensus 77 ~~i~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al 142 (295)
T cd05097 77 PNIIRLLGVCVSDDP--------------LCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGM 142 (295)
T ss_pred CCcCeEEEEEcCCCc--------------cEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHH
Confidence 999999999876543 4999999999999999965211 0112478899999999999999
Q ss_pred HHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc
Q 001143 942 VELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH 1021 (1141)
Q Consensus 942 ~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1021 (1141)
+|||++|++||||||+||+++.+ +.+||+|||++......... .......++..|+|||++.+
T Consensus 143 ~~lH~~~i~H~dlkp~Nill~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~-- 205 (295)
T cd05097 143 KYLASLNFVHRDLATRNCLVGNH-------YTIKIADFGMSRNLYSGDYY--------RIQGRAVLPIRWMAWESILL-- 205 (295)
T ss_pred HHHHhcCeeccccChhhEEEcCC-------CcEEecccccccccccCcce--------eccCcCcCceeecChhhhcc--
Confidence 99999999999999999999877 78999999998754321110 01122345778999999875
Q ss_pred CCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhh
Q 001143 1022 KPNLYGLEVDIWSYGCLLLELLT--LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE 1099 (1141)
Q Consensus 1022 ~~~~~s~ksDVWSLGviL~ELLT--Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1141)
..++.++|||||||++|+|++ +..||......+....+......... .. .......
T Consensus 206 --~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------~~-----~~~~~~~ 263 (295)
T cd05097 206 --GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGR---------------QI-----YLSQTPL 263 (295)
T ss_pred --CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccc---------------cc-----cCCCCCC
Confidence 457899999999999999998 67788766655544433211000000 00 0000013
Q ss_pred hHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 001143 1100 TLSFLVDVFRRCTEENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1100 ~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~ 1130 (1141)
.+..+.+|+.+||..||++||++++|++.+.
T Consensus 264 ~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 264 CPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred CCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 4567999999999999999999999998764
No 286
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.2e-32 Score=302.78 Aligned_cols=250 Identities=25% Similarity=0.362 Sum_probs=192.7
Q ss_pred eeecccCceEEEEEEECC---c--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGS---A--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~---~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
++||+|++|.||+|.+.. . .+++|... ..... ... ..+.+|+.++++++||||+++++++.. .
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~--~~~~~-~~~----~~~~~e~~~l~~l~h~~iv~~~~~~~~-~---- 68 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLK--SDKLS-DIM----DDFLKEAAIMHSLDHENLIRLYGVVLT-H---- 68 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecC--CcccH-HHH----HHHHHHHHHHhhcCCCCccceeEEEcC-C----
Confidence 478999999999998733 2 35666533 22111 223 334899999999999999999999875 3
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
..++||||+++++|.+++.+. ....+++..+..++.|++.||+|||++|++||||||+||+++.+
T Consensus 69 ----------~~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~-- 133 (257)
T cd05040 69 ----------PLMMVTELAPLGSLLDRLRKD---ALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASD-- 133 (257)
T ss_pred ----------eEEEEEEecCCCcHHHHHHhc---ccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecC--
Confidence 349999999999999999762 11468999999999999999999999999999999999999987
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-C
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-L 1045 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-G 1045 (1141)
+.+||+|||.+..+....... .......++..|+|||++.+ ..++.++|||||||++|+|++ |
T Consensus 134 -----~~~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~~pE~~~~----~~~~~~~Di~slG~~l~el~t~g 197 (257)
T cd05040 134 -----DKVKIGDFGLMRALPQNEDHY-------VMEEHLKVPFAWCAPESLRT----RTFSHASDVWMFGVTLWEMFTYG 197 (257)
T ss_pred -----CEEEeccccccccccccccce-------ecccCCCCCceecCHHHhcc----cCcCchhhhHHHHHHHHHHHhCC
Confidence 789999999997654322110 01112347788999999876 567889999999999999999 9
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
..||...+..+....+..... ... .+ ...+..+.+++.+||+.+|++||++.++
T Consensus 198 ~~p~~~~~~~~~~~~~~~~~~-~~~----------------------~~---~~~~~~~~~li~~~l~~~p~~Rps~~~~ 251 (257)
T cd05040 198 EEPWAGLSGSQILKKIDKEGE-RLE----------------------RP---EACPQDIYNVMLQCWAHNPADRPTFAAL 251 (257)
T ss_pred CCCCCCCCHHHHHHHHHhcCC-cCC----------------------CC---ccCCHHHHHHHHHHCCCCcccCCCHHHH
Confidence 999987776666555432111 000 00 1345679999999999999999999999
Q ss_pred HHHHH
Q 001143 1126 YEMFV 1130 (1141)
Q Consensus 1126 L~~L~ 1130 (1141)
++.+.
T Consensus 252 ~~~l~ 256 (257)
T cd05040 252 REFLP 256 (257)
T ss_pred HHHhc
Confidence 98763
No 287
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=8.8e-33 Score=345.02 Aligned_cols=270 Identities=24% Similarity=0.291 Sum_probs=195.4
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+.+|++.++||+|+||.||+|.+. +..+|+|+..... ... .....++.+|++++++++||||+++++++.+.+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l--~~~---e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~ 75 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDL--SEN---PLLKKRFLREAKIAADLIHPGIVPVYSICSDGD 75 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECccc--ccC---HHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC
Confidence 468999999999999999999985 5667777654221 111 122334589999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcC------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG------EKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~------~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
..++||||++|++|.+++....... ...+++..+..++.||+.||+|||++||+||||||
T Consensus 76 --------------~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKP 141 (932)
T PRK13184 76 --------------PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKP 141 (932)
T ss_pred --------------EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCch
Confidence 3499999999999999997532211 23466778899999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeecccccccccccccccc--------ccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI--------AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1028 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~--------~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1028 (1141)
+||+++.+ +.+||+|||+++........... .......+...+||+.|+|||++.+ ..++.
T Consensus 142 eNILLd~d-------g~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g----~~~S~ 210 (932)
T PRK13184 142 DNILLGLF-------GEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLG----VPASE 210 (932)
T ss_pred heEEEcCC-------CCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcC----CCCCc
Confidence 99999887 78999999999765211100000 0001112234579999999999876 56789
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHH
Q 001143 1029 EVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF 1108 (1141)
Q Consensus 1029 ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI 1108 (1141)
++|||||||++|||+||..||.............. ..+ .... .....++.+.+++
T Consensus 211 kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i-~~P---~~~~---------------------p~~~iP~~L~~LI 265 (932)
T PRK13184 211 STDIYALGVILYQMLTLSFPYRRKKGRKISYRDVI-LSP---IEVA---------------------PYREIPPFLSQIA 265 (932)
T ss_pred HhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhc-cCh---hhcc---------------------ccccCCHHHHHHH
Confidence 99999999999999999999976443322211100 000 0000 0014556789999
Q ss_pred HHhcccCCCCCCCH-HHHHHHH
Q 001143 1109 RRCTEENPTERPTA-GDLYEMF 1129 (1141)
Q Consensus 1109 ~~cL~~DP~~RPSa-~ElL~~L 1129 (1141)
.+||..||++||+. +++++.+
T Consensus 266 ~rcL~~DP~kR~ss~eeLl~~L 287 (932)
T PRK13184 266 MKALAVDPAERYSSVQELKQDL 287 (932)
T ss_pred HHHccCChhhCcCHHHHHHHHH
Confidence 99999999999764 4454443
No 288
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.3e-32 Score=307.14 Aligned_cols=258 Identities=23% Similarity=0.346 Sum_probs=199.0
Q ss_pred CCCCCceEeeeecccCceEEEEEEECC--c----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGS--A----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~--~----~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
....+|++.+.||+|+||.||+|.+.. . .+++|+. .... ....... +.+|+.++++++||||+++++
T Consensus 4 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~--~~~~-~~~~~~~----~~~e~~~l~~l~h~~i~~~~~ 76 (279)
T cd05057 4 LKETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVL--REET-SPKANKE----ILDEAYVMASVDHPHVVRLLG 76 (279)
T ss_pred cCHHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEec--cCCC-CHHHHHH----HHHHHHHHHhCCCCCcceEEE
Confidence 345678999999999999999998732 2 2455543 2221 1222233 378999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
++.. . ..++||||+++++|.+++.. ....+++..+..++.||+.||+|||++||+||||||
T Consensus 77 ~~~~-~--------------~~~~v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p 137 (279)
T cd05057 77 ICLS-S--------------QVQLITQLMPLGCLLDYVRN----HKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAA 137 (279)
T ss_pred EEec-C--------------ceEEEEecCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCc
Confidence 9875 2 34999999999999999875 223589999999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
+||+++.+ +.+||+|||.++......... ......++..|+|||.+.. ..++.++||||||
T Consensus 138 ~nil~~~~-------~~~kL~dfg~~~~~~~~~~~~--------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG 198 (279)
T cd05057 138 RNVLVKTP-------QHVKITDFGLAKLLDVDEKEY--------HAEGGKVPIKWMALESILH----RIYTHKSDVWSYG 198 (279)
T ss_pred ceEEEcCC-------CeEEECCCcccccccCcccce--------ecCCCcccccccCHHHhhc----CCcCchhhHHHHH
Confidence 99999877 789999999997654321110 0111224568999999865 5678999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1037 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1037 viL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
+++||+++ |+.||.+....++...+..+.....+. ..+..+.+++.+||..|
T Consensus 199 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~l~~~ 251 (279)
T cd05057 199 VTVWELMTFGAKPYEGIPAVEIPDLLEKGERLPQPP---------------------------ICTIDVYMVLVKCWMID 251 (279)
T ss_pred HHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCCCCCC---------------------------CCCHHHHHHHHHHcCCC
Confidence 99999999 999998877776666655433221110 23456889999999999
Q ss_pred CCCCCCHHHHHHHHHhh
Q 001143 1116 PTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~ 1132 (1141)
|.+||++.++++.+...
T Consensus 252 p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 252 AESRPTFKELINEFSKM 268 (279)
T ss_pred hhhCCCHHHHHHHHHHH
Confidence 99999999999887653
No 289
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=1e-32 Score=306.76 Aligned_cols=261 Identities=22% Similarity=0.339 Sum_probs=185.7
Q ss_pred eeecccCceEEEEEEE-CCccEEEEE-EecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKF-GSADAAAKV-RTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 889 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~-~~~~vAvKI-~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g 889 (1141)
+.||+|+||.||+|.+ ....++.++ +.+.. .......+ .+.+|+.+++.++||||+++++.+.....
T Consensus 1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~----~~~~e~~~~~~l~h~~iv~~~~~~~~~~~------ 69 (268)
T cd05086 1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKA-NASSKEQN----EFLQQGDPYRILQHPNILQCLGQCVEAIP------ 69 (268)
T ss_pred CcCCCCcCceEEEEEEEcCCCcceEEEEEecC-CCChHHHH----HHHHHHHHHhccCCcchhheEEEecCCCc------
Confidence 4699999999999975 333333222 22222 11122223 34899999999999999999999876543
Q ss_pred CCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCC
Q 001143 890 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 969 (1141)
Q Consensus 890 ~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~ 969 (1141)
.++||||+++++|.+++++.... ...+++..++.++.||+.||+|||+.+|+||||||+|||++.+
T Consensus 70 --------~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~----- 135 (268)
T cd05086 70 --------YLLVFEYCELGDLKSYLSQEQWH-RRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSD----- 135 (268)
T ss_pred --------cEEEEecCCCCcHHHHHHhhhcc-cccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCC-----
Confidence 49999999999999999763221 2356778889999999999999999999999999999999877
Q ss_pred CCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC---CCCCCchhhHHHHHHHHHHHHh-C
Q 001143 970 GKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK---PNLYGLEVDIWSYGCLLLELLT-L 1045 (1141)
Q Consensus 970 ~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---~~~~s~ksDVWSLGviL~ELLT-G 1045 (1141)
+.++|+|||.+........ ........++..|+|||++..... ...++.++|||||||++|||++ |
T Consensus 136 --~~~~l~Dfg~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~ 205 (268)
T cd05086 136 --LTVKVGDYGIGPSRYKEDY--------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENA 205 (268)
T ss_pred --ccEEecccccccccCcchh--------hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCC
Confidence 7899999998754221110 001123457889999999753211 1245789999999999999997 5
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
..||......+....+.......+.. +......++.+.+++..|| .+|++||++.+|
T Consensus 206 ~~p~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i 262 (268)
T cd05086 206 AQPYSHLSDREVLNHVIKDQQVKLFK----------------------PQLELPYSERWYEVLQFCW-LSPEKRATAEEV 262 (268)
T ss_pred CCCCCCCCHHHHHHHHHhhcccccCC----------------------CccCCCCcHHHHHHHHHHh-hCcccCCCHHHH
Confidence 77887766655555443222211110 1111134567888999999 689999999999
Q ss_pred HHHHH
Q 001143 1126 YEMFV 1130 (1141)
Q Consensus 1126 L~~L~ 1130 (1141)
++.+.
T Consensus 263 ~~~l~ 267 (268)
T cd05086 263 HRLLT 267 (268)
T ss_pred HHHhc
Confidence 98763
No 290
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=4.1e-33 Score=314.58 Aligned_cols=259 Identities=26% Similarity=0.434 Sum_probs=201.4
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||.||++.. .+..+++|...... ....+. +.+|+.++++++||||+++++.+....
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~----~~~e~~~l~~l~hp~i~~~~~~~~~~~ 89 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ----QPKKEL----IINEILVMRENKHPNIVNYLDSYLVGD 89 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc----chHHHH----HHHHHHHHhhcCCCCeeehhheeeeCC
Confidence 56899999999999999999986 45667777653221 122222 378999999999999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.+ ..+++..+..++.|++.||.|||++|++||||||+||+++
T Consensus 90 --------------~~~lv~e~~~~~~L~~~~~~------~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~ 149 (293)
T cd06647 90 --------------ELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 149 (293)
T ss_pred --------------cEEEEEecCCCCcHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc
Confidence 34999999999999999875 2578999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+........ ......+++.|+|||.+.. ..++.++|||||||++|+|
T Consensus 150 ~~-------~~~kL~dfg~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Dv~slG~ll~~l 208 (293)
T cd06647 150 MD-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEM 208 (293)
T ss_pred CC-------CCEEEccCcceeccccccc----------ccccccCChhhcCchhhcc----CCCCchhhHHHHHHHHHHH
Confidence 77 7899999998865432111 1123458889999999875 4578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||...+..+....+.....+... .....+..+.+++.+||..+|.+||++
T Consensus 209 l~g~~pf~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~li~~~l~~~p~~Rp~~ 263 (293)
T cd06647 209 VEGEPPYLNENPLRALYLIATNGTPELQ-------------------------NPEKLSAIFRDFLNRCLEMDVEKRGSA 263 (293)
T ss_pred HhCCCCCCCCChhhheeehhcCCCCCCC-------------------------CccccCHHHHHHHHHHccCChhhCcCH
Confidence 9999999865543322222111111110 001345578999999999999999999
Q ss_pred HHHHHHHHhhcCCCC
Q 001143 1123 GDLYEMFVARTSSSI 1137 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s~~ 1137 (1141)
.+++.|.|+......
T Consensus 264 ~~il~h~~~~~~~~~ 278 (293)
T cd06647 264 KELLQHPFLKIAKPL 278 (293)
T ss_pred HHHhcCHHHhcCccc
Confidence 999999999865433
No 291
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.4e-32 Score=307.52 Aligned_cols=272 Identities=24% Similarity=0.372 Sum_probs=193.8
Q ss_pred CCceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
.+|++.+.||+|+||.||+|.+ .+..+++|..... .....+.+ .+|++++++++||||+++++++.
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~----~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~ 75 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS----TAEHLRDF----EREIEILKSLQHDNIVKYKGVCY 75 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC----CHHHHHHH----HHHHHHHHhCCCCCeeEEEEEEc
Confidence 4689999999999999999975 2456777764321 22333334 78999999999999999999875
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
..+. ...++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 76 ~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~ni 139 (284)
T cd05081 76 SAGR------------RNLRLVMEYLPYGSLRDYLQKH----RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNI 139 (284)
T ss_pred cCCC------------CceEEEEEecCCCCHHHHHHhc----CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhE
Confidence 4221 1359999999999999999751 23589999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.+||+|||++........... ......++..|+|||++.+ ..++.++|||||||++
T Consensus 140 li~~~-------~~~~l~dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l 201 (284)
T cd05081 140 LVESE-------NRVKIGDFGLTKVLPQDKEYYK-------VREPGESPIFWYAPESLTE----SKFSVASDVWSFGVVL 201 (284)
T ss_pred EECCC-------CeEEECCCcccccccCCCccee-------ecCCCCCceEeeCHHHhcc----CCcChHHHHHHHHHHH
Confidence 99887 7899999999976543211100 0011124456999999875 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|||++|..|+.... ......+..... +.....+... ........ .....+..+.+++.+||..+|++
T Consensus 202 ~el~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~ 269 (284)
T cd05081 202 YELFTYSDKSCSPP-AEFMRMMGNDKQGQMIVYHLIEL--------LKNNGRLP---APPGCPAEIYAIMKECWNNDPSQ 269 (284)
T ss_pred HHHhhcCCcCCCcc-hhhhhhcccccccccchHHHHHH--------HhcCCcCC---CCCCCCHHHHHHHHHHccCChhh
Confidence 99999987765432 122222211111 1111110000 00000000 11245677999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001143 1119 RPTAGDLYEMFVA 1131 (1141)
Q Consensus 1119 RPSa~ElL~~L~~ 1131 (1141)
|||+.+|++.+..
T Consensus 270 Rpt~~ei~~~l~~ 282 (284)
T cd05081 270 RPSFSELALQVEA 282 (284)
T ss_pred CCCHHHHHHHHHh
Confidence 9999999998764
No 292
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=9.5e-33 Score=302.55 Aligned_cols=253 Identities=27% Similarity=0.402 Sum_probs=201.9
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.++||+|+||.||++.+. +..+++|..... .........+ .+|+.++++++||||+++++++.+..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLG--SMSQKEREDA----VNEIRILASVNHPNIISYKEAFLDGN-- 72 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehh--hccHHHHHHH----HHHHHHHHhCCCCCchhhhhhhccCC--
Confidence 5889999999999999999874 445666664432 2222223333 68999999999999999999887543
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.+... ....+++..+..++.|++.||.|||+.|++||||+|+||+++.+
T Consensus 73 ------------~~~~v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~ 139 (256)
T cd08530 73 ------------KLCIVMEYAPFGDLSKAISKRKK-KRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAN 139 (256)
T ss_pred ------------EEEEEehhcCCCCHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecC
Confidence 45999999999999999876332 23568999999999999999999999999999999999999886
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||.+....... .....+++.|+|||.+.+ ..++.++|+||||+++|+|++
T Consensus 140 -------~~~kl~d~g~~~~~~~~~------------~~~~~~~~~~~~Pe~~~~----~~~~~~~D~~slG~~~~~l~~ 196 (256)
T cd08530 140 -------DLVKIGDLGISKVLKKNM------------AKTQIGTPHYMAPEVWKG----RPYSYKSDIWSLGCLLYEMAT 196 (256)
T ss_pred -------CcEEEeeccchhhhccCC------------cccccCCccccCHHHHCC----CCCCchhhHHHHHHHHHHHHh
Confidence 789999999987654321 112347889999999876 567789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||...+..+....+.....+..+. ..+.++.+++.+||..+|++||++.+
T Consensus 197 g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p~~Rp~~~~ 249 (256)
T cd08530 197 FAPPFEARSMQDLRYKVQRGKYPPIPP---------------------------IYSQDLQNFIRSMLQVKPKLRPNCDK 249 (256)
T ss_pred CCCCCCCCCHHHHHHHHhcCCCCCCch---------------------------hhCHHHHHHHHHHcCCCcccCCCHHH
Confidence 999998877665555554433332221 34566999999999999999999999
Q ss_pred HHHHHH
Q 001143 1125 LYEMFV 1130 (1141)
Q Consensus 1125 lL~~L~ 1130 (1141)
+++|++
T Consensus 250 ~l~~p~ 255 (256)
T cd08530 250 ILASPA 255 (256)
T ss_pred HhcCCC
Confidence 999875
No 293
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=9.2e-33 Score=306.34 Aligned_cols=252 Identities=26% Similarity=0.381 Sum_probs=188.4
Q ss_pred eEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
.....||+|+||.||+|++... .+++|.. ... .....+.+ .+|+.++++++||||+++++++....
T Consensus 11 ~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~--~~~--~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~---- 78 (268)
T cd06624 11 GERVVLGKGTYGIVYAARDLSTQVRIAIKEI--PER--DSRYVQPL----HEEIALHSYLKHRNIVQYLGSDSENG---- 78 (268)
T ss_pred CceEEEecCCceEEEEeEecCCCcEEEEEEe--cCC--CHHHHHHH----HHHHHHHHhcCCCCeeeeeeeeccCC----
Confidence 4446899999999999997544 4555543 321 12223333 79999999999999999999987654
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCC--CHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHV--SVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~L--s~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.++++.. ...+ ++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 79 ----------~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~ 144 (268)
T cd06624 79 ----------FFKIFMEQVPGGSLSALLRSK----WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTY 144 (268)
T ss_pred ----------EEEEEEecCCCCCHHHHHHHh----cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCC
Confidence 349999999999999999752 1234 888899999999999999999999999999999999763
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
. +.++|+|||.+........ ......+++.|+|||++.... ..++.++||||||+++|+|++
T Consensus 145 ~------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~~~--~~~~~~~Dv~slGvvl~~l~~ 206 (268)
T cd06624 145 S------GVVKISDFGTSKRLAGINP----------CTETFTGTLQYMAPEVIDKGP--RGYGAPADIWSLGCTIVEMAT 206 (268)
T ss_pred C------CeEEEecchhheecccCCC----------ccccCCCCccccChhhhcccc--ccCCchhhhHHHHHHHHHHHh
Confidence 2 6799999999865432110 111234788999999986521 346789999999999999999
Q ss_pred CCCCCCCCCHHH-HHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1045 LQVPYMGLSELE-IHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1045 Gk~Pf~~~~~~e-l~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
|..||....... ....+ .....+. .+...++++.+++.+||+.+|.+|||+
T Consensus 207 g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~~p~~Rpt~ 259 (268)
T cd06624 207 GKPPFIELGEPQAAMFKVGMFKIHPE---------------------------IPESLSAEAKNFILRCFEPDPDKRASA 259 (268)
T ss_pred CCCCCccccChhhhHhhhhhhccCCC---------------------------CCcccCHHHHHHHHHHcCCCchhCCCH
Confidence 999997533211 11111 0011111 111445678999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.|++.|+|+
T Consensus 260 ~~ll~~~~~ 268 (268)
T cd06624 260 HDLLQDPFL 268 (268)
T ss_pred HHHHhCCCC
Confidence 999999985
No 294
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=4.9e-33 Score=314.76 Aligned_cols=253 Identities=28% Similarity=0.467 Sum_probs=198.7
Q ss_pred ceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|.....||+|+||.||+|.+ .+..+++|+..... ....+. +.+|+.+++.++||||+++++++....
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~----~~~~~~----~~~e~~~l~~l~hp~i~~~~~~~~~~~--- 91 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK----QQRREL----LFNEVVIMRDYQHQNVVEMYKSYLVGE--- 91 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc----cchHHH----HHHHHHHHHhCCCCchhhhhhheeeCC---
Confidence 45556899999999999987 46778888754321 111222 378999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
..++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 92 -----------~~~iv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~- 153 (297)
T cd06659 92 -----------ELWVLMEFLQGGALTDIVSQ------TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLD- 153 (297)
T ss_pred -----------eEEEEEecCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccC-
Confidence 34999999999999998754 358999999999999999999999999999999999999887
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.+||+|||++..+..... ......|+..|+|||++.+ ..++.++|||||||++|+|++|
T Consensus 154 ------~~~kL~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~~g 213 (297)
T cd06659 154 ------GRVKLSDFGFCAQISKDVP----------KRKSLVGTPYWMAPEVISR----TPYGTEVDIWSLGIMVIEMVDG 213 (297)
T ss_pred ------CcEEEeechhHhhcccccc----------cccceecCccccCHHHHcc----CCCCchhhHHHHHHHHHHHHhC
Confidence 7899999999865432111 1123458899999999876 4578999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
+.||......+....+.....+... .....+..+.+++.+||+.+|.+||++.++
T Consensus 214 ~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~l~~~i~~~l~~~P~~Rps~~~l 268 (297)
T cd06659 214 EPPYFSDSPVQAMKRLRDSPPPKLK-------------------------NAHKISPVLRDFLERMLTREPQERATAQEL 268 (297)
T ss_pred CCCCCCCCHHHHHHHHhccCCCCcc-------------------------ccCCCCHHHHHHHHHHhcCCcccCcCHHHH
Confidence 9999876655544444322111100 001345568999999999999999999999
Q ss_pred HHHHHhhcC
Q 001143 1126 YEMFVARTS 1134 (1141)
Q Consensus 1126 L~~L~~~~~ 1134 (1141)
++|+|+...
T Consensus 269 l~~~~~~~~ 277 (297)
T cd06659 269 LDHPFLLQT 277 (297)
T ss_pred hhChhhccC
Confidence 999998754
No 295
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=6e-33 Score=306.14 Aligned_cols=257 Identities=25% Similarity=0.354 Sum_probs=196.7
Q ss_pred CceEeeeecccCceEEEEEEECCc--cEEEEEEec-ccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTL-KVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l-~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+|.+.++||+|+||.||++++... .+++|+.+. ............ +..|+.++++++||||+++++++.+..
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~- 75 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQ----ANQEAQLLSKLDHPAIVKFHASFLERD- 75 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHH----HHHHHHHHHhCCCCcHHHHHHHHhcCC-
Confidence 588999999999999999988543 345554321 111111111122 357999999999999999999987544
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++...... ...+++..++.++.|++.||.|||++|++|+||||+||+++.
T Consensus 76 -------------~~~lv~e~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~ 141 (260)
T cd08222 76 -------------AFCIITEYCEGRDLDCKLEELKHT-GKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN 141 (260)
T ss_pred -------------ceEEEEEeCCCCCHHHHHHHHhhc-ccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec
Confidence 349999999999999999764333 347999999999999999999999999999999999999974
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+.++|+|||.+........ ......|++.|+|||.+.+ ..++.++|+||||+++|+|+
T Consensus 142 --------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~~----~~~~~~~Dv~slG~~~~~l~ 199 (260)
T cd08222 142 --------NLLKIGDFGVSRLLMGSCD----------LATTFTGTPYYMSPEALKH----QGYDSKSDIWSLGCILYEMC 199 (260)
T ss_pred --------CCEeecccCceeecCCCcc----------cccCCCCCcCccCHHHHcc----CCCCchhhHHHHHHHHHHHH
Confidence 4599999999866432111 1123457889999999865 45678999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||...........+..+..+..+ ...+.++.+++.+||..||++||++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 252 (260)
T cd08222 200 CLAHAFEGQNFLSVVLRIVEGPTPSLP---------------------------ETYSRQLNSIMQSMLNKDPSLRPSAA 252 (260)
T ss_pred hCCCCCCCccHHHHHHHHHcCCCCCCc---------------------------chhcHHHHHHHHHHhcCChhhCcCHH
Confidence 999999765555444444333222211 14556789999999999999999999
Q ss_pred HHHHHHHh
Q 001143 1124 DLYEMFVA 1131 (1141)
Q Consensus 1124 ElL~~L~~ 1131 (1141)
++++|+|+
T Consensus 253 ~il~~~~~ 260 (260)
T cd08222 253 EILRNPFI 260 (260)
T ss_pred HHhhCCCC
Confidence 99999985
No 296
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=3.1e-34 Score=307.45 Aligned_cols=298 Identities=20% Similarity=0.266 Sum_probs=213.7
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
..+..|++.+.||+|+||.||+|... ...+|+|.++..+...+ +.....+|+.+++.++||||+.+..
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG------iS~SAcREiaL~REl~h~nvi~Lv~ 94 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG------ISMSACREIALLRELKHPNVISLVK 94 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC------cCHHHHHHHHHHHHhcCCcchhHHH
Confidence 34667999999999999999999642 12456665443322111 1223369999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
+|...+ ..+++++||.+ .+|...|+-.+....+.++...++.|++||+.|+.|||++=|+||||||
T Consensus 95 Vfl~~d-------------~~v~l~fdYAE-hDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKP 160 (438)
T KOG0666|consen 95 VFLSHD-------------KKVWLLFDYAE-HDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKP 160 (438)
T ss_pred HHhccC-------------ceEEEEehhhh-hhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCc
Confidence 887522 24699999998 8999999876666667899999999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
.||||..+++ .+|.|||+|||+|+.+....... ...+..+-|.+|+|||.+.+. ..|++++||||.|
T Consensus 161 aNIlvmgdgp---erG~VKIaDlGlaR~~~~plkpl-------~s~d~VVVTiWYRAPELLLGa---~hYT~AiDvWAiG 227 (438)
T KOG0666|consen 161 ANILVMGDGP---ERGRVKIADLGLARLFNNPLKPL-------ASLDPVVVTIWYRAPELLLGA---RHYTKAIDVWAIG 227 (438)
T ss_pred ceEEEeccCC---ccCeeEeecccHHHHhhcccccc-------ccCCceEEEEEecChHHhccc---ccccchhhhHHHH
Confidence 9999987743 35899999999999877654332 123456789999999999984 5789999999999
Q ss_pred HHHHHHHhCCCCCCCCCH---------HHHHHHH-HhCCCCCchhHHhhhccCcccc--ccc----cCCCCCCchh---h
Q 001143 1037 CLLLELLTLQVPYMGLSE---------LEIHDLI-QMGKRPRLTDELEALGSCHEHE--VAQ----SGSGFEKPEA---E 1097 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~---------~el~~~I-~~~~~p~l~~~l~~~~~~~~~~--~~~----~~~~~~~~~~---~ 1097 (1141)
||+.||+|-++.|.+... .+..+.| .....|. ...++......+.. +.+ .....+.... .
T Consensus 228 CIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt-~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~ 306 (438)
T KOG0666|consen 228 CIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPT-DKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKH 306 (438)
T ss_pred HHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCc-cccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHh
Confidence 999999999888865211 1223333 2222222 11122221111110 000 0000000000 0
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1098 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1098 ~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
...++...+|+.+||.+||.+|.|++++++|++|...
T Consensus 307 k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d 343 (438)
T KOG0666|consen 307 KVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED 343 (438)
T ss_pred cCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence 1123457899999999999999999999999999865
No 297
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6e-33 Score=319.09 Aligned_cols=290 Identities=18% Similarity=0.220 Sum_probs=204.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|++|.||+|.+. +..+++|+.... .......+ .+.+|+.++++++||||+++++++.....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~--~~~~~~~~----~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 78 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHA--FDVPTLAK----RTLRELKILRHFKHDNIIAIRDILRPPGA 78 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccc--cccccchH----HHHHHHHHHHhcCCCCccCHHHhccccCC
Confidence 57899999999999999999874 566777764322 21112222 23689999999999999999998764321
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.....++||||+. ++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 79 ----------~~~~~~lv~e~~~-~~l~~~~~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~ 142 (334)
T cd07855 79 ----------DFKDVYVVMDLME-SDLHHIIHS-----DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNE 142 (334)
T ss_pred ----------CCceEEEEEehhh-hhHHHHhcc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence 1235699999996 689888864 345999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++......... .........++..|+|||++.+ ...++.++|||||||++|+|+
T Consensus 143 ~-------~~~kl~dfg~~~~~~~~~~~------~~~~~~~~~~~~~y~~PE~~~~---~~~~~~~~Di~slG~~l~el~ 206 (334)
T cd07855 143 D-------CELRIGDFGMARGLSSSPTE------HKYFMTEYVATRWYRAPELLLS---LPEYTTAIDMWSVGCIFAEML 206 (334)
T ss_pred C-------CcEEecccccceeecccCcC------CCcccccccccccccChHHhcC---CcccccccchHHHHHHHHHHH
Confidence 7 78999999998765332111 0011123468899999999865 234789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|+.||.+.+.......+.. ...+.. ..+............+ ..............+..+.++|.+||+.||.+|
T Consensus 207 ~g~~pf~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 285 (334)
T cd07855 207 GRRQLFPGKNYVHQLKLILSVLGSPSE-EVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEER 285 (334)
T ss_pred cCCCccCCCChHHHHHHHHHHhCCChh-HhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhC
Confidence 99999987665554443322 121111 1111000000000000 000000011112456789999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
|++.+++.|+|+...
T Consensus 286 pt~~~~l~~~~~~~~ 300 (334)
T cd07855 286 ITVEQALQHPFLAQY 300 (334)
T ss_pred cCHHHHHhChhhhhc
Confidence 999999999999643
No 298
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.1e-32 Score=312.68 Aligned_cols=257 Identities=27% Similarity=0.405 Sum_probs=200.0
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..|.+.+.||+|+||.||+|.+ .+..+++|+..... .......+. +.+|+.+++.++||||+++++++.....
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~----~~~Ei~~l~~l~h~niv~~~~~~~~~~~ 89 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSG-KQSNEKWQD----IIKEVRFLQQLRHPNTIEYKGCYLREHT 89 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccc-cCcHHHHHH----HHHHHHHHHhCCCCCEEEEEEEEEeCCe
Confidence 4588999999999999999987 45667777653221 112222233 3789999999999999999999886543
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||++ |+|.+++... ...+++..+..++.||+.||.|||+.||+||||+|+||+++.
T Consensus 90 --------------~~lv~e~~~-g~l~~~~~~~----~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~ 150 (307)
T cd06607 90 --------------AWLVMEYCL-GSASDILEVH----KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTE 150 (307)
T ss_pred --------------EEEEHHhhC-CCHHHHHHHc----ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECC
Confidence 499999997 6887777541 236899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||++...... ....+++.|+|||++.+.. ...++.++||||||+++|+|+
T Consensus 151 ~-------~~~kL~dfg~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~-~~~~~~~sDv~s~G~il~el~ 208 (307)
T cd06607 151 P-------GTVKLADFGSASLVSPA--------------NSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELA 208 (307)
T ss_pred C-------CCEEEeecCcceecCCC--------------CCccCCccccCceeeeccC-CCCCCcccchHHHHHHHHHHH
Confidence 7 78999999988643221 1335788999999875321 245788999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|+.||.+.........+.....+.... ...+..+.+++.+||..||.+||++.
T Consensus 209 tg~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ 262 (307)
T cd06607 209 ERKPPLFNMNAMSALYHIAQNDSPTLSS--------------------------NDWSDYFRNFVDSCLQKIPQDRPSSE 262 (307)
T ss_pred cCCCCCCCccHHHHHHHHhcCCCCCCCc--------------------------hhhCHHHHHHHHHHhcCChhhCcCHH
Confidence 9999998766555444433322221110 13456799999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001143 1124 DLYEMFVARTS 1134 (1141)
Q Consensus 1124 ElL~~L~~~~~ 1134 (1141)
+++.|+|+...
T Consensus 263 ~il~~~~~~~~ 273 (307)
T cd06607 263 ELLKHRFVLRE 273 (307)
T ss_pred HHhcChhhccc
Confidence 99999999754
No 299
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=4.2e-33 Score=312.34 Aligned_cols=265 Identities=24% Similarity=0.321 Sum_probs=195.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~ 881 (1141)
.++|+..++||+|+||.||++.+. +..+++|..... ... .... .+.+|+.++.++. ||||+++++++..+
T Consensus 3 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~--~~~-~~~~----~~~~e~~~l~~~~~~~~iv~~~~~~~~~ 75 (288)
T cd06616 3 AEDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRST--VDE-KEQK----RLLMDLDVVMRSSDCPYIVKFYGALFRE 75 (288)
T ss_pred HHHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhc--cCh-HHHH----HHHHHHHHHHHhcCCCCEeeeeeEEecC
Confidence 456778899999999999999985 456666654322 212 2222 3478999999996 99999999988764
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCCee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENIL 960 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~NIL 960 (1141)
. ..++||||+. ++|.++...........+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 76 ~--------------~~~~~~e~~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil 140 (288)
T cd06616 76 G--------------DCWICMELMD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNIL 140 (288)
T ss_pred C--------------cEEEEEeccc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEE
Confidence 4 3489999986 6776655432223335799999999999999999999975 9999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.++|+|||++..+.... ......|++.|+|||++.+.. ...++.++|||||||++|
T Consensus 141 ~~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~ 201 (288)
T cd06616 141 LDRN-------GNIKLCDFGISGQLVDSI-----------AKTRDAGCRPYMAPERIDPSA-RDGYDVRSDVWSLGITLY 201 (288)
T ss_pred EccC-------CcEEEeecchhHHhccCC-----------ccccccCccCccCHHHhcccc-ccCCcchhhhhHHHHHHH
Confidence 9877 789999999986543211 111235788999999987521 135789999999999999
Q ss_pred HHHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1041 ELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|++|+.||..... .+....+.....+.+.. ......+.++.+|+.+||+.||++|
T Consensus 202 el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~~p~~R 258 (288)
T cd06616 202 EVATGKFPYPKWNSVFDQLTQVVKGDPPILSN-----------------------SEEREFSPSFVNFINLCLIKDESKR 258 (288)
T ss_pred HHHhCCCCchhcchHHHHHhhhcCCCCCcCCC-----------------------cCCCccCHHHHHHHHHHccCChhhC
Confidence 99999999975431 11111111111111110 0001456679999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
||+.+|++|+|+..
T Consensus 259 pt~~~i~~~~~~~~ 272 (288)
T cd06616 259 PKYKELLEHPFIKD 272 (288)
T ss_pred cCHHHHhcChhhhc
Confidence 99999999999975
No 300
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=1.3e-32 Score=304.66 Aligned_cols=257 Identities=26% Similarity=0.398 Sum_probs=192.9
Q ss_pred eeecccCceEEEEEEECC--------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 812 DEAGKSVSSSLFRCKFGS--------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~--------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+.||+|+||.||+|++.. ..+++|... .. ........ +.+|+.+++.++||||+++++++.....
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~--~~-~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 73 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLR--KG-ATDQEKKE----FLKEAHLMSNFNHPNIVKLLGVCLLNEP 73 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhh--cc-cchhhHHH----HHHHHHHHHhcCCCCeeeEeeeecCCCC
Confidence 468999999999998743 345666532 11 11122233 3789999999999999999999876443
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~--~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.++||||+++++|.+++++.... ....+++..+..++.||+.||.|||+.+++|+||||+||++
T Consensus 74 --------------~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~ 139 (269)
T cd05044 74 --------------QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLV 139 (269)
T ss_pred --------------eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEE
Confidence 49999999999999999763221 22358899999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+.. .....++|+|||++......... .......++..|+|||++.+ ..++.++|||||||++|+
T Consensus 140 ~~~~~--~~~~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~il~e 205 (269)
T cd05044 140 SEKGY--DADRVVKIGDFGLARDIYKSDYY--------RKEGEGLLPVRWMAPESLLD----GKFTTQSDVWSFGVLMWE 205 (269)
T ss_pred ecCCC--CCCcceEECCccccccccccccc--------ccCcccCCCccccCHHHHcc----CCcccchhHHHHHHHHHH
Confidence 87620 11237999999998754322111 01112245778999999876 567899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++ |+.||......+....+........+ ...+..+.+++.+||..+|.+||
T Consensus 206 llt~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp 258 (269)
T cd05044 206 ILTLGQQPYPALNNQEVLQHVTAGGRLQKP---------------------------ENCPDKIYQLMTNCWAQDPSERP 258 (269)
T ss_pred HHHcCCCCCcccCHHHHHHHHhcCCccCCc---------------------------ccchHHHHHHHHHHcCCCcccCC
Confidence 998 99999876666655554333221111 14456789999999999999999
Q ss_pred CHHHHHHHHH
Q 001143 1121 TAGDLYEMFV 1130 (1141)
Q Consensus 1121 Sa~ElL~~L~ 1130 (1141)
++.++++.+.
T Consensus 259 ~~~~i~~~l~ 268 (269)
T cd05044 259 TFDRIQEILQ 268 (269)
T ss_pred CHHHHHHHHh
Confidence 9999998764
No 301
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=1.9e-32 Score=308.92 Aligned_cols=265 Identities=20% Similarity=0.313 Sum_probs=193.5
Q ss_pred CCceEeeeecccCceEEEEEEECC------------------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGS------------------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR 867 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~------------------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~ 867 (1141)
.+|++.++||+|+||.||+|.+.+ ..+|+|+.... ........ +.+|+.++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~---~~~~~~~~----~~~E~~~l~~l~ 77 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED---ANKNARND----FLKEIKIMSRLK 77 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc---CCHHHHHH----HHHHHHHHHhCC
Confidence 469999999999999999986532 23555554321 11222233 479999999999
Q ss_pred CCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc------CCCCCCHHHHHHHHHHHHHHH
Q 001143 868 HSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------GEKHVSVKLALFIAQDVAAAL 941 (1141)
Q Consensus 868 HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~------~~~~Ls~~~i~~Ia~QIa~gL 941 (1141)
||||+++++++...+. .++||||+++++|.+++...... ....+++..+..++.||+.||
T Consensus 78 ~~~i~~~~~~~~~~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al 143 (296)
T cd05095 78 DPNIIRLLAVCITSDP--------------LCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGM 143 (296)
T ss_pred CCCcceEEEEEecCCc--------------cEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHH
Confidence 9999999999876553 39999999999999999763211 112478889999999999999
Q ss_pred HHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc
Q 001143 942 VELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH 1021 (1141)
Q Consensus 942 ~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1021 (1141)
+|||++||+||||||+|||++.+ +.++|+|||++..+...... .......+++.|+|||...+
T Consensus 144 ~~lH~~~i~H~dlkp~Nili~~~-------~~~~l~dfg~~~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~-- 206 (296)
T cd05095 144 KYLSSLNFVHRDLATRNCLVGKN-------YTIKIADFGMSRNLYSGDYY--------RIQGRAVLPIRWMSWESILL-- 206 (296)
T ss_pred HHHHHCCeecccCChheEEEcCC-------CCEEeccCcccccccCCcce--------eccCcCcCccccCCHHHHhc--
Confidence 99999999999999999999876 78999999998754321110 01112234678999998765
Q ss_pred CCCCCCchhhHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhh
Q 001143 1022 KPNLYGLEVDIWSYGCLLLELLT--LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE 1099 (1141)
Q Consensus 1022 ~~~~~s~ksDVWSLGviL~ELLT--Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1141)
..++.++|||||||++|||++ |..||...+..+............. . ...... ...
T Consensus 207 --~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~----------------~-~~~~~~---~~~ 264 (296)
T cd05095 207 --GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQG----------------R-QVYLPK---PAL 264 (296)
T ss_pred --CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhcc----------------c-cccCCC---CCC
Confidence 467899999999999999998 7789976665554432211000000 0 000000 013
Q ss_pred hHHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Q 001143 1100 TLSFLVDVFRRCTEENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1100 ~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~ 1130 (1141)
++..+.+++.+||+.||.+||++.+|++.+.
T Consensus 265 ~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 265 CPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred CCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 4567999999999999999999999998764
No 302
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=1.2e-32 Score=303.98 Aligned_cols=247 Identities=27% Similarity=0.322 Sum_probs=195.6
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 814 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 814 LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
||.|++|.||+|++. +..+++|+....... .... ...+.+|+.+++.++||||+++++.+.+...
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------- 67 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV-ETGQ----QEHIFSEKEILEECNHPFIVKLYRTFKDKKY-------- 67 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcch-hhhH----HHHHHHHHHHHHhCCCCCEeeeeeeEEcCCc--------
Confidence 799999999999986 677888875432211 1112 2334899999999999999999999876553
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 971 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~ 971 (1141)
.++||||+++++|.+++.+ ...+++..+..++.||+.||.|||+++++|+||+|+||+++.+
T Consensus 68 ------~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~------- 129 (262)
T cd05572 68 ------IYMLMEYCLGGELWTILRD-----RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSN------- 129 (262)
T ss_pred ------cEEEEecCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCC-------
Confidence 3999999999999999976 2358999999999999999999999999999999999999887
Q ss_pred CeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001143 972 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1051 (1141)
Q Consensus 972 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~ 1051 (1141)
+.++|+|||.+....... ......+++.|+|||.+.+ ..++.++|+||||+++|+|++|..||..
T Consensus 130 ~~~~l~df~~~~~~~~~~-----------~~~~~~~~~~~~~PE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~~~ 194 (262)
T cd05572 130 GYVKLVDFGFAKKLKSGQ-----------KTWTFCGTPEYVAPEIILN----KGYDFSVDYWSLGILLYELLTGRPPFGE 194 (262)
T ss_pred CCEEEeeCCcccccCccc-----------ccccccCCcCccChhHhcC----CCCCChhhhhhhHHHHHHHHhCCCCcCC
Confidence 789999999987654321 1112357889999999865 4578999999999999999999999976
Q ss_pred CC--HHHHHHHHHhCC-CCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC-----HH
Q 001143 1052 LS--ELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT-----AG 1123 (1141)
Q Consensus 1052 ~~--~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS-----a~ 1123 (1141)
.. ..+....+..+. .+..+ ...+..+.+++.+||..||++||+ +.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 247 (262)
T cd05572 195 DDEDPMEIYNDILKGNGKLEFP---------------------------NYIDKAAKDLIKQLLRRNPEERLGNLKGGIK 247 (262)
T ss_pred CCCCHHHHHHHHhccCCCCCCC---------------------------cccCHHHHHHHHHHccCChhhCcCCcccCHH
Confidence 55 444444433211 11110 123567999999999999999999 99
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
|+++|+|+..
T Consensus 248 ~l~~~~~~~~ 257 (262)
T cd05572 248 DIKKHKWFNG 257 (262)
T ss_pred HHhcChhhhC
Confidence 9999999974
No 303
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.2e-32 Score=309.30 Aligned_cols=254 Identities=27% Similarity=0.432 Sum_probs=199.7
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|...++||+|++|.||+|.+. +..+++|..... .....+. +.+|+.+++.++||||+++++++...+
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~----~~~~~~~----~~~e~~~l~~~~h~~vv~~~~~~~~~~-- 89 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLR----KQQRREL----LFNEVVIMRDYQHPNIVEMYSSYLVGD-- 89 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEecc----chhHHHH----HHHHHHHHHHcCCCChheEEEEEEcCC--
Confidence 3556689999999999999874 455777754322 1122222 378999999999999999999987644
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
+.++||||+++++|.+++.. .++++..+..++.|++.||+|||++||+||||+|+||+++.+
T Consensus 90 ------------~~~~v~e~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~ 151 (285)
T cd06648 90 ------------ELWVVMEFLEGGALTDIVTH------TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSD 151 (285)
T ss_pred ------------eEEEEEeccCCCCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCC
Confidence 34999999999999999875 358999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+....... .......|++.|+|||.+.+ ..++.++|||||||++|+|++
T Consensus 152 -------~~~~l~d~g~~~~~~~~~----------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slGv~l~ell~ 210 (285)
T cd06648 152 -------GRVKLSDFGFCAQVSKEV----------PRRKSLVGTPYWMAPEVISR----LPYGTEVDIWSLGIMVIEMVD 210 (285)
T ss_pred -------CcEEEcccccchhhccCC----------cccccccCCccccCHHHhcC----CCCCCcccHHHHHHHHHHHHh
Confidence 789999999876443211 11123458899999999875 457899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||...+..+....+.....+.... ....+..+.+++.+||..+|.+||++.+
T Consensus 211 g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 265 (285)
T cd06648 211 GEPPYFNEPPLQAMKRIRDNLPPKLKN-------------------------LHKVSPRLRSFLDRMLVRDPAQRATAAE 265 (285)
T ss_pred CCCCCcCCCHHHHHHHHHhcCCCCCcc-------------------------cccCCHHHHHHHHHHcccChhhCcCHHH
Confidence 999998766655555544332211110 0024567999999999999999999999
Q ss_pred HHHHHHhhcC
Q 001143 1125 LYEMFVARTS 1134 (1141)
Q Consensus 1125 lL~~L~~~~~ 1134 (1141)
+++|.|+...
T Consensus 266 il~~~~~~~~ 275 (285)
T cd06648 266 LLNHPFLAKA 275 (285)
T ss_pred HccCcccccC
Confidence 9999998754
No 304
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-33 Score=296.19 Aligned_cols=276 Identities=22% Similarity=0.246 Sum_probs=203.4
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
-.+|++.++||+|+|+.||+++. .+..+|+|..... ..++.+.. ++|++..++++||||++++++...+.
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~----~~~~~e~~----~rEid~~rkf~s~~vl~l~dh~l~~~ 91 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCH----SQEDIEEA----LREIDNHRKFNSPNVLRLVDHQLREE 91 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeecc----chHHHHHH----HHHHHHHHhhCCcchHHHHHHHHHhh
Confidence 35799999999999999999985 4566677654322 23444444 79999999999999999999876432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCCee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL 960 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g--IvHrDLKP~NIL 960 (1141)
. | .....||+++|+..|||.+.|+.....+ ..+++.+++.|+.+|++||++||+.. +.||||||.|||
T Consensus 92 ~----D-----~~~~~yll~Pyy~~Gsl~d~i~~~k~kg-~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NIL 161 (302)
T KOG2345|consen 92 K----D-----GKHEAYLLLPYYKRGSLLDEIERLKIKG-NFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANIL 161 (302)
T ss_pred c----c-----CceeEEEEeehhccccHHHHHHHHhhcC-CccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeE
Confidence 1 1 2235799999999999999999765444 47999999999999999999999998 999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
+... +.++|+|||.+............+.+-.. ......|..|+|||.+.- ......++++|||||||+||
T Consensus 162 ls~~-------~~~vl~D~GS~~~a~i~i~~~~~a~~lQe-~a~e~Ct~pyRAPELf~v-k~~~ti~ertDIWSLGCtLY 232 (302)
T KOG2345|consen 162 LSDS-------GLPVLMDLGSATQAPIQIEGSRQALRLQE-WAEERCTIPYRAPELFNV-KSHCTITERTDIWSLGCTLY 232 (302)
T ss_pred ecCC-------CceEEEeccCccccceEeechHHHHHHHH-HHHHhCCCcccCchheec-ccCcccccccchhhhhHHHH
Confidence 9886 78999999999765433222111111000 112247999999999864 33467789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|+.|..||... + ..|....+.- .....+.|... ..+..+.++++.||+.||.+||
T Consensus 233 a~mf~~sPfe~~-----~---~~GgSlaLAv---------------~n~q~s~P~~~-~yse~l~~lik~mlqvdP~qRP 288 (302)
T KOG2345|consen 233 AMMFGESPFERI-----Y---QQGGSLALAV---------------QNAQISIPNSS-RYSEALHQLIKSMLQVDPNQRP 288 (302)
T ss_pred HHHHcCCcchHH-----h---hcCCeEEEee---------------eccccccCCCC-CccHHHHHHHHHHhcCCcccCC
Confidence 999999999631 1 1222111100 00001111111 3677899999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
++.+++.++..
T Consensus 289 ~i~~ll~~~d~ 299 (302)
T KOG2345|consen 289 TIPELLSKLDD 299 (302)
T ss_pred CHHHHHHHHHh
Confidence 99999988754
No 305
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=9e-33 Score=308.60 Aligned_cols=278 Identities=21% Similarity=0.263 Sum_probs=198.5
Q ss_pred ceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|++.+.||.|++|.||+|.+ .+..+++|+...+.. ....... +.+|+.++++++||||+++++++.+..
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~----~~~E~~~l~~l~~~~iv~~~~~~~~~~--- 71 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETE--DEGVPST----AIREISLLKELNHPNIVRLLDVVHSEN--- 71 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccc--cccchhH----HHHHHHHHHhcCCCCccCHhheeccCC---
Confidence 67889999999999999987 466777777554321 1111122 368999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
..++||||++ ++|.+++... ....+++..+..++.||+.||+|||+++++||||+|+||+++.+
T Consensus 72 -----------~~~iv~e~~~-~~l~~~~~~~---~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~- 135 (283)
T cd07835 72 -----------KLYLVFEFLD-LDLKKYMDSS---PLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDRE- 135 (283)
T ss_pred -----------eEEEEEeccC-cCHHHHHhhC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCC-
Confidence 3499999995 7999998752 22368999999999999999999999999999999999999886
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.++|+|||.+......... .....++..|+|||++.+ ...++.++||||||+++|+|++|
T Consensus 136 ------~~~~l~df~~~~~~~~~~~~----------~~~~~~~~~~~aPE~~~~---~~~~~~~~Di~slG~~l~~l~~g 196 (283)
T cd07835 136 ------GALKLADFGLARAFGVPVRT----------YTHEVVTLWYRAPEILLG---SRQYSTPVDIWSIGCIFAEMVNR 196 (283)
T ss_pred ------CcEEEeecccccccCCCccc----------cCccccccCCCCCceeec---CcccCcHHHHHHHHHHHHHHHhC
Confidence 78999999998654321110 112246889999998765 23467899999999999999999
Q ss_pred CCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccCc--cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1046 QVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCH--EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+.||...+.......+ .....+. ...+....... ...+... ............+..+.+++.+||+.||.+|||+
T Consensus 197 ~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~ 274 (283)
T cd07835 197 RPLFPGDSEIDQLFRIFRTLGTPD-EDVWPGVTSLPDYKPTFPKW-ARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISA 274 (283)
T ss_pred CCCCCCCCHHHHHHHHHHHhCCCC-hHHhhhhhhchhhhhhcccc-cccchhhhcCCCCHHHHHHHHHHhcCChhhCcCH
Confidence 9999876654433333 2222111 11110000000 0000000 0000011112455779999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.|+++|+||
T Consensus 275 ~~il~~~~~ 283 (283)
T cd07835 275 KAALQHPYF 283 (283)
T ss_pred HHHhcCCCC
Confidence 999999886
No 306
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.1e-32 Score=299.98 Aligned_cols=248 Identities=27% Similarity=0.420 Sum_probs=192.2
Q ss_pred eeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGN 890 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~ 890 (1141)
++||+|+||.||+|.+. +..+++|+..... . ....+. +.+|+.+++++.||||+++++++.+...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~--~-~~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~~------- 66 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTL--P-PDLKRK----FLQEAEILKQYDHPNIVKLIGVCVQKQP------- 66 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccC--C-HHHHHH----HHHHHHHHHhCCCCCeEEEEEEEecCCC-------
Confidence 47999999999999975 6777777644321 1 122233 4789999999999999999999876553
Q ss_pred CccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCC
Q 001143 891 PEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADG 970 (1141)
Q Consensus 891 ~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~ 970 (1141)
.++||||+++++|.+++... ...+++..+..++.|++.||.|||+++++||||||+||+++.+
T Consensus 67 -------~~~v~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~------ 129 (251)
T cd05041 67 -------IYIVMELVPGGSLLTFLRKK----KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGEN------ 129 (251)
T ss_pred -------eEEEEEcCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCC------
Confidence 49999999999999998751 2358899999999999999999999999999999999999887
Q ss_pred CCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCC
Q 001143 971 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPY 1049 (1141)
Q Consensus 971 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf 1049 (1141)
+.++|+|||.+......... .......++..|+|||++.+ ..++.++|||||||++|+|++ |..||
T Consensus 130 -~~~~l~d~g~~~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~i~~~l~t~~~~p~ 196 (251)
T cd05041 130 -NVLKISDFGMSREEEGGIYT--------VSDGLKQIPIKWTAPEALNY----GRYTSESDVWSYGILLWETFSLGDTPY 196 (251)
T ss_pred -CcEEEeeccccccccCCcce--------eccccCcceeccCChHhhcc----CCCCcchhHHHHHHHHHHHHhccCCCC
Confidence 78999999998754321110 00111224567999999876 467899999999999999999 88999
Q ss_pred CCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 001143 1050 MGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF 1129 (1141)
Q Consensus 1050 ~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L 1129 (1141)
...........+........+ ...+..+.+++.+||..+|.+|||+.|+++.+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l 249 (251)
T cd05041 197 PGMSNQQTRERIESGYRMPAP---------------------------QLCPEEIYRLMLQCWAYDPENRPSFSEIYNEL 249 (251)
T ss_pred ccCCHHHHHHHHhcCCCCCCC---------------------------ccCCHHHHHHHHHHhccChhhCcCHHHHHHHh
Confidence 876655555544332211111 13456799999999999999999999999876
Q ss_pred H
Q 001143 1130 V 1130 (1141)
Q Consensus 1130 ~ 1130 (1141)
.
T Consensus 250 ~ 250 (251)
T cd05041 250 Q 250 (251)
T ss_pred h
Confidence 3
No 307
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=8.5e-33 Score=307.49 Aligned_cols=258 Identities=21% Similarity=0.338 Sum_probs=195.8
Q ss_pred CCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
.+|++.+.||+|+||.||+|++. ...+++|+.. .. ......+. +.+|++++++++||||+++++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~--~~-~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~ 77 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQ--KT-KDENLQSE----FRRELDMFRKLSHKNVVRLLGLC 77 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccC--Cc-cchHHHHH----HHHHHHHHHhcCCcceeeeEEEE
Confidence 56899999999999999999963 2345666532 11 11112333 47899999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG----EKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 954 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~----~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDL 954 (1141)
.+... .++||||+++++|.+++....... ...+++..+..++.||+.||+|||+++|+||||
T Consensus 78 ~~~~~--------------~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl 143 (275)
T cd05046 78 REAEP--------------HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDL 143 (275)
T ss_pred CCCCc--------------ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcC
Confidence 76543 399999999999999997632110 125899999999999999999999999999999
Q ss_pred CCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001143 955 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1034 (1141)
Q Consensus 955 KP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWS 1034 (1141)
||+||+++.+ +.++++|||++........ .......+++.|+|||.+.+ ..++.++||||
T Consensus 144 kp~Nili~~~-------~~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~s 203 (275)
T cd05046 144 AARNCLVSSQ-------REVKVSLLSLSKDVYNSEY---------YKLRNALIPLRWLAPEAVQE----DDFSTKSDVWS 203 (275)
T ss_pred ccceEEEeCC-------CcEEEcccccccccCcccc---------cccCCceeEEeecChhhhcc----CCCCchhhHHH
Confidence 9999999887 7899999999864322110 01122346778999999875 45678999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001143 1035 YGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1035 LGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~ 1113 (1141)
||+++|+|++ |..||......+....+..+.... . . ....+..+.+++.+||+
T Consensus 204 lG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~-~----------------------~---~~~~~~~l~~~i~~~l~ 257 (275)
T cd05046 204 FGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLEL-P----------------------V---PEGCPSRLYKLMTRCWA 257 (275)
T ss_pred HHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCC-C----------------------C---CCCCCHHHHHHHHHHcC
Confidence 9999999999 888997665555544443222110 0 0 01445679999999999
Q ss_pred cCCCCCCCHHHHHHHHH
Q 001143 1114 ENPTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~ 1130 (1141)
.||.+|||+.|+++++.
T Consensus 258 ~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 258 VNPKDRPSFSELVSALG 274 (275)
T ss_pred CCcccCCCHHHHHHHhc
Confidence 99999999999999874
No 308
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.3e-32 Score=309.10 Aligned_cols=282 Identities=21% Similarity=0.243 Sum_probs=195.8
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+|.+.+.||+|+||.||+|.+ .+..+++|+...+.. . .... .+.+|+.+++.++|+||+++++++...
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~-~~~~----~~~~e~~~l~~l~h~ni~~~~~~~~~~ 75 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTE--E-GVPF----TAIREASLLKGLKHANIVLLHDIIHTK 75 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCc--C-CCcH----HHHHHHHHHHhcCCCCEeEEEEEEecC
Confidence 356899999999999999999987 466788887643321 1 1111 236899999999999999999998764
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+. ++|.+++.. . ...+++..+..++.||+.||.|||++||+|+||||+||++
T Consensus 76 ~--------------~~~lv~e~~~-~~l~~~~~~---~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~ 136 (291)
T cd07870 76 E--------------TLTFVFEYMH-TDLAQYMIQ---H-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLI 136 (291)
T ss_pred C--------------eEEEEEeccc-CCHHHHHHh---C-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEE
Confidence 4 3499999996 788777654 1 2357888999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.++|+|||+++........ .....+++.|+|||++.+ ...++.++|||||||++|+
T Consensus 137 ~~~-------~~~~l~Dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~~l~~ 196 (291)
T cd07870 137 SYL-------GELKLADFGLARAKSIPSQT----------YSSEVVTLWYRPPDVLLG---ATDYSSALDIWGAGCIFIE 196 (291)
T ss_pred cCC-------CcEEEeccccccccCCCCCC----------CCCccccccccCCceeec---CCCCCcHHHHHHHHHHHHH
Confidence 877 78999999998654321111 122347889999999865 2346789999999999999
Q ss_pred HHhCCCCCCCCCHH-HHHHHH-HhCCCCCch--hHHhhhccCccccccc-cCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1042 LLTLQVPYMGLSEL-EIHDLI-QMGKRPRLT--DELEALGSCHEHEVAQ-SGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~-el~~~I-~~~~~p~l~--~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|++|+.||.+.... +....+ .....+... ................ ..............+..+.+++.+|+..||
T Consensus 197 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp 276 (291)
T cd07870 197 MLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFP 276 (291)
T ss_pred HHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCc
Confidence 99999999764432 222222 111111100 0000000000000000 000000000011235678999999999999
Q ss_pred CCCCCHHHHHHHHHh
Q 001143 1117 TERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~ 1131 (1141)
.+|||+.|++.|+|+
T Consensus 277 ~~R~t~~~~l~h~~~ 291 (291)
T cd07870 277 KDRISAQDALLHPYF 291 (291)
T ss_pred ccCcCHHHHhcCCCC
Confidence 999999999999986
No 309
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=6.5e-34 Score=333.98 Aligned_cols=263 Identities=21% Similarity=0.362 Sum_probs=218.2
Q ss_pred CCCCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~---~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
+.....+.++||.|-||.|++|+.+ +..+.|+||.++... ...+..+| +.|+.||.++.||||+++.|++..
T Consensus 627 d~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~Gy-tekqrrdF----L~EAsIMGQFdHPNIIrLEGVVTk 701 (996)
T KOG0196|consen 627 DPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGY-TEKQRRDF----LSEASIMGQFDHPNIIRLEGVVTK 701 (996)
T ss_pred ChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCc-cHHHHhhh----hhhhhhcccCCCCcEEEEEEEEec
Confidence 3445689999999999999999873 456667776676532 33444555 999999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.... +||+|||++|+|+.+++. .++.|+..+..-++++|+.|++||-+.++|||||-+.|||
T Consensus 702 s~Pv--------------MIiTEyMENGsLDsFLR~----~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNIL 763 (996)
T KOG0196|consen 702 SKPV--------------MIITEYMENGSLDSFLRQ----NDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNIL 763 (996)
T ss_pred Ccee--------------EEEhhhhhCCcHHHHHhh----cCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhhee
Confidence 6543 999999999999999987 2356999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ -.+|++|||+++.+.+.....+.+.. ---...|.|||.+.. ..++.++||||||+++|
T Consensus 764 VNsn-------LvCKVsDFGLSRvledd~~~~ytt~G-------GKIPiRWTAPEAIa~----RKFTsASDVWSyGIVmW 825 (996)
T KOG0196|consen 764 VNSN-------LVCKVSDFGLSRVLEDDPEAAYTTLG-------GKIPIRWTAPEAIAY----RKFTSASDVWSYGIVMW 825 (996)
T ss_pred eccc-------eEEEeccccceeecccCCCccccccC-------CccceeecChhHhhh----cccCchhhccccceEEE
Confidence 9988 89999999999977554322111111 112467999999986 67899999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1041 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1041 ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|.++ |..||...+..+++..|..+.+.+.+ .+++..+.+|+..||++|-.+|
T Consensus 826 EVmSyGERPYWdmSNQdVIkaIe~gyRLPpP---------------------------mDCP~aL~qLMldCWqkdR~~R 878 (996)
T KOG0196|consen 826 EVMSYGERPYWDMSNQDVIKAIEQGYRLPPP---------------------------MDCPAALYQLMLDCWQKDRNRR 878 (996)
T ss_pred EecccCCCcccccchHHHHHHHHhccCCCCC---------------------------CCCcHHHHHHHHHHHHHHhhcC
Confidence 9888 99999999999999999877664322 2788889999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
|.+.||+.++-....
T Consensus 879 P~F~qiV~~lDklIr 893 (996)
T KOG0196|consen 879 PKFAQIVSTLDKLIR 893 (996)
T ss_pred CCHHHHHHHHHHHhc
Confidence 999999999876543
No 310
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.6e-32 Score=316.18 Aligned_cols=287 Identities=18% Similarity=0.217 Sum_probs=202.2
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|.+.+.||+|+||+||+|++. +..+++|..... ......... +.+|+.+++.++||||+++++++.....
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~ni~~~~~~~~~~~~ 78 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANA--FDNRIDAKR----TLREIKLLRHLDHENVIAIKDIMPPPHR 78 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccc--ccccchhHH----HHHHHHHHHhcCCCCccchHHheecccc
Confidence 46999999999999999999974 556777764321 111112222 3689999999999999999998765321
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. .....++||||+. ++|.+++.. ...+++..+..++.||+.||.|||+++++||||||+||+++.
T Consensus 79 ~---------~~~~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~ 143 (337)
T cd07858 79 E---------AFNDVYIVYELMD-TDLHQIIRS-----SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNA 143 (337)
T ss_pred c---------ccCcEEEEEeCCC-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence 1 1234699999996 789888865 346999999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++........ ......++..|+|||.+... ..++.++|||||||++|+|+
T Consensus 144 ~-------~~~kL~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~---~~~~~~~DiwslG~il~~l~ 203 (337)
T cd07858 144 N-------CDLKICDFGLARTTSEKGD----------FMTEYVVTRWYRAPELLLNC---SEYTTAIDVWSVGCIFAELL 203 (337)
T ss_pred C-------CCEEECcCccccccCCCcc----------cccccccccCccChHHHhcC---CCCCCcccHHHHHHHHHHHH
Confidence 7 7899999999876532110 11233578899999998642 34778999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCC---CCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSG---FEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|+.||.+.+.......+........................+.... ..........++.+.+++.+||+.||++||
T Consensus 204 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp 283 (337)
T cd07858 204 GRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRI 283 (337)
T ss_pred cCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhcc
Confidence 99999987655444433322111111111100000000000000000 000111124677899999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001143 1121 TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~ 1133 (1141)
|+.++++|+|+..
T Consensus 284 s~~ell~h~~~~~ 296 (337)
T cd07858 284 TVEEALAHPYLAS 296 (337)
T ss_pred CHHHHHcCcchhh
Confidence 9999999999975
No 311
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.4e-32 Score=309.58 Aligned_cols=258 Identities=21% Similarity=0.332 Sum_probs=196.4
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--Cc----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SA----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~----~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
...+|+..+.||+|+||.||+|.+. +. .+++|+. .... ...... .+.+|+.++++++||||++++++
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~--~~~~-~~~~~~----~~~~e~~~~~~l~h~niv~~~~~ 77 (303)
T cd05110 5 KETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKIL--NETT-GPKANV----EFMDEALIMASMDHPHLVRLLGV 77 (303)
T ss_pred chhhceeccccccCCCccEEEEEEecCCCcceeeEEEEec--cccC-CHHHHH----HHHHHHHHHHhCCCCCcccEEEE
Confidence 3457889999999999999999873 32 2455543 2211 112122 24789999999999999999998
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+.... .++||||+++|+|.+++.. ....+++..+..++.||+.||.|||++||+||||||+
T Consensus 78 ~~~~~---------------~~~v~e~~~~g~l~~~~~~----~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~ 138 (303)
T cd05110 78 CLSPT---------------IQLVTQLMPHGCLLDYVHE----HKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAAR 138 (303)
T ss_pred EcCCC---------------ceeeehhcCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccc
Confidence 86422 2799999999999999875 1235899999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
||+++.+ +.+||+|||+++........ .......++..|+|||++.+ ..++.++|||||||
T Consensus 139 Nill~~~-------~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~~PE~~~~----~~~~~~~DiwslG~ 199 (303)
T cd05110 139 NVLVKSP-------NHVKITDFGLARLLEGDEKE--------YNADGGKMPIKWMALECIHY----RKFTHQSDVWSYGV 199 (303)
T ss_pred eeeecCC-------CceEEccccccccccCcccc--------cccCCCccccccCCHHHhcc----CCCChHHHHHHHHH
Confidence 9999876 67999999999765432111 01112335778999999875 56789999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|||++ |+.||.+....+....+..+..+..+ ...+..+.+++.+||..+|
T Consensus 200 ~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~c~~~~p 252 (303)
T cd05110 200 TIWELMTFGGKPYDGIPTREIPDLLEKGERLPQP---------------------------PICTIDVYMVMVKCWMIDA 252 (303)
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC---------------------------CCCCHHHHHHHHHHcCCCh
Confidence 9999998 89999876655555554433222111 0234568999999999999
Q ss_pred CCCCCHHHHHHHHHhhc
Q 001143 1117 TERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~ 1133 (1141)
++||++.++++.+....
T Consensus 253 ~~Rp~~~~l~~~l~~~~ 269 (303)
T cd05110 253 DSRPKFKELAAEFSRMA 269 (303)
T ss_pred hhCcCHHHHHHHHHHHH
Confidence 99999999999887643
No 312
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.3e-32 Score=308.35 Aligned_cols=249 Identities=21% Similarity=0.263 Sum_probs=185.0
Q ss_pred eecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHH---HhhCCCCCccceeeeEecCCCCCCC
Q 001143 813 EAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM---LGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 813 ~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~i---L~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
.||+|+||.||+|.+. +..+|+|+........... ...+ .+|..+ +....||||+.+++++...+.
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---- 71 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG-ETLA----LNERIMLSLVSTGDCPFIVCMTYAFHTPDK---- 71 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH-HHHH----HHHHHHHHHHhhCCCCcEeEEEEEEecCCe----
Confidence 4899999999999984 5678888754322111111 1111 334433 334479999999999876543
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 967 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~ 967 (1141)
.++||||+++++|.+++.. ...+++..+..|+.|++.||+|||+++|+||||||+||+++.+
T Consensus 72 ----------~~lv~e~~~~~~L~~~i~~-----~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~--- 133 (279)
T cd05633 72 ----------LCFILDLMNGGDLHYHLSQ-----HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEH--- 133 (279)
T ss_pred ----------EEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCC---
Confidence 4999999999999999875 3469999999999999999999999999999999999999877
Q ss_pred CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001143 968 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1047 (1141)
Q Consensus 968 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~ 1047 (1141)
+.++|+|||++....... .....|++.|+|||.+.. ...++.++|||||||++|+|++|..
T Consensus 134 ----~~~~l~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~~l~~l~~g~~ 194 (279)
T cd05633 134 ----GHVRISDLGLACDFSKKK------------PHASVGTHGYMAPEVLQK---GTAYDSSADWFSLGCMLFKLLRGHS 194 (279)
T ss_pred ----CCEEEccCCcceeccccC------------ccCcCCCcCccCHHHhcC---CCCCCchhhhHHHHHHHHHHHhCCC
Confidence 789999999986443211 112358999999999863 2457889999999999999999999
Q ss_pred CCCCCCHHH--HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----
Q 001143 1048 PYMGLSELE--IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP----- 1120 (1141)
Q Consensus 1048 Pf~~~~~~e--l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP----- 1120 (1141)
||....... ............ .....+..+.+++.+||+.||.+||
T Consensus 195 pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~~p~~R~~~~~~ 247 (279)
T cd05633 195 PFRQHKTKDKHEIDRMTLTVNVE---------------------------LPDSFSPELKSLLEGLLQRDVSKRLGCLGR 247 (279)
T ss_pred CcCCCCCcCHHHHHHHhhcCCcC---------------------------CccccCHHHHHHHHHHhcCCHHHhcCCCCC
Confidence 997532211 111111000000 0114566799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
++.++++|+|++.-
T Consensus 248 ~~~~~~~h~~~~~~ 261 (279)
T cd05633 248 GAQEVKEHVFFKGI 261 (279)
T ss_pred CHHHHHhCccccCC
Confidence 69999999999753
No 313
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=2.5e-32 Score=298.48 Aligned_cols=252 Identities=30% Similarity=0.433 Sum_probs=199.5
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|++|.||+|.+. +..+++|..... ......... +.+|++++.+++|||++++++++....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLE--KIKEEALKS----IMQEIDLLKNLKHPNIVKYIGSIETSD-- 72 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEeccc--ccCHHHHHH----HHHHHHHHHhCCCCCccEEEEEEEeCC--
Confidence 5889999999999999999874 456777775433 222223333 489999999999999999999987644
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.||+||||||+||+++.+
T Consensus 73 ------------~~~~v~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~ 135 (254)
T cd06627 73 ------------SLYIILEYAENGSLRQIIKK-----FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKD 135 (254)
T ss_pred ------------EEEEEEecCCCCcHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCC
Confidence 34999999999999999876 2468999999999999999999999999999999999999876
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+......... .....++..|+|||...+ ..++.++||||+|+++|+|++
T Consensus 136 -------~~~~l~d~~~~~~~~~~~~~----------~~~~~~~~~y~~pe~~~~----~~~~~~~Dv~~lG~~l~~l~~ 194 (254)
T cd06627 136 -------GVVKLADFGVATKLNDVSKD----------DASVVGTPYWMAPEVIEM----SGASTASDIWSLGCTVIELLT 194 (254)
T ss_pred -------CCEEEeccccceecCCCccc----------ccccccchhhcCHhhhcC----CCCCcchhHHHHHHHHHHHHh
Confidence 78999999999765432110 123457889999999875 347789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|..||...........+.....+.++ ...+..+.+++.+||..+|++|||+.+
T Consensus 195 g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~i~~~l~~~p~~R~~~~~ 247 (254)
T cd06627 195 GNPPYYDLNPMAALFRIVQDDHPPLP---------------------------EGISPELKDFLMQCFQKDPNLRPTAKQ 247 (254)
T ss_pred CCCCCCCccHHHHHHHHhccCCCCCC---------------------------CCCCHHHHHHHHHHHhCChhhCcCHHH
Confidence 99999765544333333222211111 134567899999999999999999999
Q ss_pred HHHHHHh
Q 001143 1125 LYEMFVA 1131 (1141)
Q Consensus 1125 lL~~L~~ 1131 (1141)
++.+.|+
T Consensus 248 ~l~~~~~ 254 (254)
T cd06627 248 LLKHPWI 254 (254)
T ss_pred HhcCCCC
Confidence 9998875
No 314
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2e-32 Score=306.72 Aligned_cols=270 Identities=23% Similarity=0.337 Sum_probs=191.4
Q ss_pred ceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 808 LSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
|++.+.||+|+||.||+|.+ .+..+++|... ... ....... +.+|+.++++++||||+++++++...
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~--~~~-~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~ 78 (284)
T cd05079 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLK--PES-GGNHIAD----LKKEIEILRNLYHENIVKYKGICTED 78 (284)
T ss_pred hhhceecCCCCceeEEEEEEccCCCCccceEEEEEcC--ccc-cHHHHHH----HHHHHHHHHhCCCCCeeeeeeEEecC
Confidence 68899999999999999985 24556776643 211 1222233 48999999999999999999988754
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+. ...++||||++|++|.+++... ...+++..+..++.||+.||+|||++||+||||||+||++
T Consensus 79 ~~------------~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~ 142 (284)
T cd05079 79 GG------------NGIKLIMEFLPSGSLKEYLPRN----KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLV 142 (284)
T ss_pred CC------------CceEEEEEccCCCCHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEE
Confidence 21 1348999999999999998651 2358999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.++|+|||++..+....... .......++..|+|||++.+ ..++.++|||||||++|+
T Consensus 143 ~~~-------~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~apE~~~~----~~~~~~~Di~slG~il~e 204 (284)
T cd05079 143 ESE-------HQVKIGDFGLTKAIETDKEYY-------TVKDDLDSPVFWYAPECLIQ----SKFYIASDVWSFGVTLYE 204 (284)
T ss_pred cCC-------CCEEECCCccccccccCccce-------eecCCCCCCccccCHHHhcc----CCCCccccchhhhhhhhh
Confidence 877 789999999987654321110 01123456778999999875 467889999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++++.|+..... .......... ........... ....... ....++..+.+|+.+||+.||.+||
T Consensus 205 llt~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp 271 (284)
T cd05079 205 LLTYCDSESSPMT-LFLKMIGPTHGQMTVTRLVRVL---------EEGKRLP---RPPNCPEEVYQLMRKCWEFQPSKRT 271 (284)
T ss_pred hhcCCCCCccccc-hhhhhcccccccccHHHHHHHH---------HcCccCC---CCCCCCHHHHHHHHHHccCCcccCc
Confidence 9998776542111 0111000000 00000000000 0000000 0114567899999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
|+.++++.+..
T Consensus 272 t~~~il~~l~~ 282 (284)
T cd05079 272 TFQNLIEGFEA 282 (284)
T ss_pred CHHHHHHHHHh
Confidence 99999998764
No 315
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=5.4e-33 Score=306.12 Aligned_cols=251 Identities=26% Similarity=0.336 Sum_probs=198.1
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||.|+||.||+|.+. +..+++|+...+.. ......+ .+.+|++++++++||||+++++.+.+..
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 73 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC-VEKGSVR----NVLNERRILQELNHPFLVNLWYSFQDEE-- 73 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhh-cchhHHH----HHHHHHHHHHhCCCCChHHHHHhhcCCC--
Confidence 5899999999999999999985 67788887643221 1112223 3479999999999999999999887544
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.. ..++++..+..|+.||+.||.|||++|++|+||+|+||+++.+
T Consensus 74 ------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~ 136 (258)
T cd05578 74 ------------NMYLVVDLLLGGDLRYHLSQ-----KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQ 136 (258)
T ss_pred ------------eEEEEEeCCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCC
Confidence 45999999999999999976 2468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+....... ......|+..|+|||++.. ..++.++|+||||+++|+|++
T Consensus 137 -------~~~~l~d~~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~~l~~l~~ 194 (258)
T cd05578 137 -------GHVHITDFNIATKVTPDT-----------LTTSTSGTPGYMAPEVLCR----QGYSVAVDWWSLGVTAYECLR 194 (258)
T ss_pred -------CCEEEeecccccccCCCc-----------cccccCCChhhcCHHHHcc----cCCCCcccchhhHHHHHHHHh
Confidence 789999999986543321 1113457889999999876 447899999999999999999
Q ss_pred CCCCCCCCCH---HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1045 LQVPYMGLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1045 Gk~Pf~~~~~---~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|..||..... .+....... ..+.. ....+..+.++|.+||..||.+||+
T Consensus 195 g~~p~~~~~~~~~~~~~~~~~~-~~~~~---------------------------~~~~~~~~~~~i~~~l~~~p~~R~~ 246 (258)
T cd05578 195 GKRPYRGHSRTIRDQIRAKQET-ADVLY---------------------------PATWSTEAIDAINKLLERDPQKRLG 246 (258)
T ss_pred CCCCCCCCCccHHHHHHHHhcc-ccccC---------------------------cccCcHHHHHHHHHHccCChhHcCC
Confidence 9999986553 222222111 11110 0134567999999999999999999
Q ss_pred H--HHHHHHHHh
Q 001143 1122 A--GDLYEMFVA 1131 (1141)
Q Consensus 1122 a--~ElL~~L~~ 1131 (1141)
+ .|+++|+||
T Consensus 247 ~~~~~l~~~~~~ 258 (258)
T cd05578 247 DNLKDLKNHPYF 258 (258)
T ss_pred ccHHHHhcCCCC
Confidence 9 999999885
No 316
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.7e-32 Score=298.99 Aligned_cols=250 Identities=28% Similarity=0.466 Sum_probs=196.4
Q ss_pred ceEeeeecccCceEEEEEEECC------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGS------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
+++.+.||.|+||.||+|.+.. ..+++|+.... . .....+.+ ..|+.++..++||||+++++++.+.
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~--~-~~~~~~~~----~~e~~~l~~l~~~~i~~~~~~~~~~ 73 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKED--A-DEQQIEEF----LREARIMRKLDHPNIVKLLGVCTEE 73 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCC--C-ChHHHHHH----HHHHHHHHhcCCCchheEEEEEcCC
Confidence 3678899999999999999865 55677764322 1 11133344 7899999999999999999998865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+ ..++||||+++++|.+++... ....+++..+..++.||+.||.|||+.|++||||||+||++
T Consensus 74 ~--------------~~~~i~e~~~~~~l~~~~~~~---~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~ 136 (258)
T smart00219 74 E--------------PLMIVMEYMEGGDLLDYLRKN---RPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLV 136 (258)
T ss_pred C--------------eeEEEEeccCCCCHHHHHHhh---hhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEE
Confidence 4 349999999999999999762 11128999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.++|+|||.+......... ......+++.|+|||.+.+ ..++.++||||+|+++++
T Consensus 137 ~~~-------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~Pe~~~~----~~~~~~~Di~slG~i~~~ 196 (258)
T smart00219 137 GEN-------LVVKISDFGLSRDLYDDDYY---------KKKGGKLPIRWMAPESLKD----GKFTSKSDVWSFGVLLWE 196 (258)
T ss_pred ccC-------CeEEEcccCCceeccccccc---------ccccCCCcccccChHHhcc----CCCCcchhHHHHHHHHHH
Confidence 887 78999999999765432111 0001226788999999854 567899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++ |..||......+....+.....+..+. ..+.++.+++.+||..||.+||
T Consensus 197 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~i~~~l~~~p~~Rp 249 (258)
T smart00219 197 IFTLGESPYPGMSNEEVLEYLKKGYRLPKPE---------------------------NCPPEIYKLMLQCWAEDPEDRP 249 (258)
T ss_pred HHhCCCCCCCCCCHHHHHHHHhcCCCCCCCC---------------------------cCCHHHHHHHHHHCcCChhhCc
Confidence 998 889998776666666655443322111 3456799999999999999999
Q ss_pred CHHHHHHH
Q 001143 1121 TAGDLYEM 1128 (1141)
Q Consensus 1121 Sa~ElL~~ 1128 (1141)
|+.|+++.
T Consensus 250 t~~~ll~~ 257 (258)
T smart00219 250 TFSELVEI 257 (258)
T ss_pred CHHHHHhh
Confidence 99999875
No 317
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=324.54 Aligned_cols=262 Identities=23% Similarity=0.356 Sum_probs=211.6
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC---Cc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG---SA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~---~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
+..++..+.++||+|+||.|++|.|+ ++ .||||+ +...... ....+| ++|+.+|.+|+|||++++||.
T Consensus 107 Ipee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKc--lr~d~l~-~~mddf----lrEas~M~~L~H~hliRLyGv 179 (1039)
T KOG0199|consen 107 IPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKC--LRDDSLN-AIMDDF----LREASHMLKLQHPHLIRLYGV 179 (1039)
T ss_pred ccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEe--ccCCccc-hhHHHH----HHHHHHHHhccCcceeEEeee
Confidence 33456788999999999999999994 34 455555 4332222 245555 899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+.+.. ..+|||+++.|||.+++++ .....|.......++.||+.||.||.++++|||||-..
T Consensus 180 Vl~qp---------------~mMV~ELaplGSLldrLrk---a~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAAR 241 (1039)
T KOG0199|consen 180 VLDQP---------------AMMVFELAPLGSLLDRLRK---AKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAAR 241 (1039)
T ss_pred eccch---------------hhHHhhhcccchHHHHHhh---ccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Confidence 98632 3799999999999999987 34457889999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|+|+-.. ..|||+|||+.+.+......+... ....-.+.|+|||.+.. ..++.++|||+|||
T Consensus 242 Nlllasp-------rtVKI~DFGLmRaLg~ned~Yvm~-------p~rkvPfAWCaPEsLrh----~kFShaSDvWmyGV 303 (1039)
T KOG0199|consen 242 NLLLASP-------RTVKICDFGLMRALGENEDMYVMA-------PQRKVPFAWCAPESLRH----RKFSHASDVWMYGV 303 (1039)
T ss_pred hheeccc-------ceeeeecccceeccCCCCcceEec-------CCCcCcccccCHhHhcc----ccccccchhhhhhh
Confidence 9999765 689999999999887654332111 11123567999999986 67899999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+||||+| |..||.+....++++.|..+.+..-+ ..+++++++++..||..+|
T Consensus 304 TiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRP---------------------------k~csedIY~imk~cWah~p 356 (1039)
T KOG0199|consen 304 TIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRP---------------------------KYCSEDIYQIMKNCWAHNP 356 (1039)
T ss_pred hHHhhhccCCCCCCCCCHHHHHHhccccccCCCC---------------------------CCChHHHHHHHHHhccCCc
Confidence 9999999 89999999999988888644432211 1788899999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001143 1117 TERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~ 1134 (1141)
.+||||..|.+.+.....
T Consensus 357 aDRptFsair~~~~l~ea 374 (1039)
T KOG0199|consen 357 ADRPTFSAIREDLVLAEA 374 (1039)
T ss_pred cccccHHHHHHhHHHHhc
Confidence 999999999876655443
No 318
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=2.1e-32 Score=315.88 Aligned_cols=284 Identities=20% Similarity=0.216 Sum_probs=201.8
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|.+.+.||+|+||.||+|.+. +..+|+|+..... .... +...+.+|+.++++++||||+++++++.....
T Consensus 15 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~----~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~ 88 (342)
T cd07879 15 ERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPF--QSEI----FAKRAYRELTLLKHMQHENVIGLLDVFTSAVS 88 (342)
T ss_pred cceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCcc--cccc----chhHHHHHHHHHHhcCCCCccchhheeccccc
Confidence 47899999999999999999874 5667777643221 1111 11234789999999999999999999875432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. ......++||||+. .+|..++. ..+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 89 ~--------~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~ 152 (342)
T cd07879 89 G--------DEFQDFYLVMPYMQ-TDLQKIMG-------HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNE 152 (342)
T ss_pred C--------CCCceEEEEecccc-cCHHHHHc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECC
Confidence 1 12235699999996 57766542 25899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+++..... .....++..|+|||++.+ ...++.++|||||||++|||+
T Consensus 153 ~-------~~~kL~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slGvil~el~ 209 (342)
T cd07879 153 D-------CELKILDFGLARHADAE-------------MTGYVVTRWYRAPEVILN---WMHYNQTVDIWSVGCIMAEML 209 (342)
T ss_pred C-------CCEEEeeCCCCcCCCCC-------------CCCceeeecccChhhhcC---ccccCchHHHHHHHHHHHHHH
Confidence 7 78999999998653221 112357889999999865 234778999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCch---hhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE---AELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|+.||.+.+.......+........+......................... .....+..+.+++.+||+.||.+||
T Consensus 210 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~ 289 (342)
T cd07879 210 TGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRL 289 (342)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCc
Confidence 9999998876655554443322222221111110000000000000000000 0113456789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
++.+++.|+|+..-
T Consensus 290 ~~~e~l~h~~f~~~ 303 (342)
T cd07879 290 TATEALEHPYFDSF 303 (342)
T ss_pred CHHHHhcCcchhhc
Confidence 99999999999754
No 319
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=320.99 Aligned_cols=251 Identities=22% Similarity=0.388 Sum_probs=209.3
Q ss_pred eEeeeecccCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
++.+.||.|-||.||.|.+ ++...||+|+..+... ..+..+.| +.|..+|++++|||||+++|.+.+..
T Consensus 392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~-t~d~tekf----lqEa~iMrnfdHphIikLIGv~~e~P-- 464 (974)
T KOG4257|consen 392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDC-TPDDTEKF----LQEASIMRNFDHPHIIKLIGVCVEQP-- 464 (974)
T ss_pred cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCC-ChhhHHHH----HHHHHHHHhCCCcchhheeeeeeccc--
Confidence 5678999999999999997 3556777776665432 23334555 89999999999999999999998643
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.|||||+++-|.|..+++. ....++......+++||..||.|||+.++|||||-..|||+...
T Consensus 465 -------------~WivmEL~~~GELr~yLq~----nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp 527 (974)
T KOG4257|consen 465 -------------MWIVMELAPLGELREYLQQ----NKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSP 527 (974)
T ss_pred -------------eeEEEecccchhHHHHHHh----ccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCc
Confidence 3999999999999999986 23469999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
..|||+|||+++.+....... + ....-...|||||.+.- ..++.++|||-|||.+||++.
T Consensus 528 -------~CVKLaDFGLSR~~ed~~yYk--a-------S~~kLPIKWmaPESINf----RrFTtASDVWMFgVCmWEIl~ 587 (974)
T KOG4257|consen 528 -------QCVKLADFGLSRYLEDDAYYK--A-------SRGKLPIKWMAPESINF----RRFTTASDVWMFGVCMWEILS 587 (974)
T ss_pred -------ceeeecccchhhhccccchhh--c-------cccccceeecCccccch----hcccchhhHHHHHHHHHHHHH
Confidence 789999999999876644221 1 12224567999999875 678999999999999999998
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 -Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|..||++....+++..+..|.+++.+. .+++.+..|+.+||.+||.+||.+.
T Consensus 588 lGvkPfqgvkNsDVI~~iEnGeRlP~P~---------------------------nCPp~LYslmskcWayeP~kRPrft 640 (974)
T KOG4257|consen 588 LGVKPFQGVKNSDVIGHIENGERLPCPP---------------------------NCPPALYSLMSKCWAYEPSKRPRFT 640 (974)
T ss_pred hcCCccccccccceEEEecCCCCCCCCC---------------------------CCChHHHHHHHHHhccCcccCCcHH
Confidence 999999988778877777777765543 7788899999999999999999999
Q ss_pred HHHHHHH
Q 001143 1124 DLYEMFV 1130 (1141)
Q Consensus 1124 ElL~~L~ 1130 (1141)
|+...+.
T Consensus 641 ei~~~ls 647 (974)
T KOG4257|consen 641 EIKAILS 647 (974)
T ss_pred HHHHHHH
Confidence 9877653
No 320
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.7e-32 Score=315.64 Aligned_cols=291 Identities=23% Similarity=0.253 Sum_probs=205.2
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 880 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~ 880 (1141)
-.++|++.+.||+|+||.||+|.+. +..+++|... ...........+ .+|+.+++++ +||||+++++++..
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~--~~~~~~~~~~~~----~~E~~~l~~l~~h~ni~~~~~~~~~ 78 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIF--DAFRNATDAQRT----FREIMFLQELGDHPNIVKLLNVIKA 78 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeec--cccCcchhhhhh----hHHHHHHHHhcCCCCccceeeeecc
Confidence 3567999999999999999999984 4556666532 211122222233 6899999999 99999999998865
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.+. ...++||||++ ++|..++.. ..+++..+..++.||+.||.|||+.||+||||||+||+
T Consensus 79 ~~~------------~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nil 139 (337)
T cd07852 79 END------------KDIYLVFEYME-TDLHAVIRA------NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNIL 139 (337)
T ss_pred CCC------------ceEEEEecccc-cCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEE
Confidence 321 24699999997 699988865 26889999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||.+.......... .........|+..|+|||++.+ ...++.++||||||+++|
T Consensus 140 l~~~-------~~~kl~d~g~~~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~sDi~slG~~l~ 204 (337)
T cd07852 140 LNSD-------CRVKLADFGLARSLSELEENP-----ENPVLTDYVATRWYRAPEILLG---STRYTKGVDMWSVGCILG 204 (337)
T ss_pred EcCC-------CcEEEeeccchhccccccccc-----cCcchhcccccccccCceeeec---cccccccchHHHHHHHHH
Confidence 9987 889999999997654322110 0112223468999999998765 245678999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|++|+.||.+....+....+......................... ..............+.++.+++.+||+.||.
T Consensus 205 el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~ 284 (337)
T cd07852 205 EMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPN 284 (337)
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcc
Confidence 9999999998766655544442222111111111110000000000 0000000111123567899999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001143 1118 ERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~~ 1134 (1141)
+|||+.++++|+|+...
T Consensus 285 ~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 285 KRLTAEEALEHPYVAQF 301 (337)
T ss_pred cccCHHHHhhChhhhhh
Confidence 99999999999988643
No 321
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=3.4e-32 Score=301.39 Aligned_cols=258 Identities=26% Similarity=0.388 Sum_probs=197.7
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCC-ChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGS-SADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.+|++.+.||+|+||.||+|.+ .+..+++|+........ ..... ..+.+|+.++++++||||+++++++.+..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~----~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 77 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEV----NALECEIQLLKNLRHDRIVQYYGCLRDPE 77 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHH----HHHHHHHHHHHHcCCCCcceEEEEEEcCC
Confidence 4689999999999999999987 45678888654332111 11222 24489999999999999999999986532
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. ...++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+|+||||+||+++
T Consensus 78 ~------------~~~~~v~e~~~~~~L~~~~~~-----~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~ 140 (264)
T cd06653 78 E------------KKLSIFVEYMPGGSIKDQLKA-----YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD 140 (264)
T ss_pred C------------CEEEEEEEeCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc
Confidence 1 245899999999999999875 23588999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+......... ........++..|+|||++.+ ..++.++|||||||++|+|
T Consensus 141 ~~-------~~~~l~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 202 (264)
T cd06653 141 SA-------GNVKLGDFGASKRIQTICMS-------GTGIKSVTGTPYWMSPEVISG----EGYGRKADVWSVACTVVEM 202 (264)
T ss_pred CC-------CCEEECcccccccccccccc-------CccccccCCcccccCHhhhcC----CCCCccccHHHHHHHHHHH
Confidence 77 78999999999765321100 001123458899999999876 4567899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++|+.||......+....+... ..+.++ ...++.+.+++.+||. +|.+||+
T Consensus 203 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~p---------------------------~~~~~~~~~~i~~~l~-~~~~r~~ 254 (264)
T cd06653 203 LTEKPPWAEYEAMAAIFKIATQPTKPMLP---------------------------DGVSDACRDFLKQIFV-EEKRRPT 254 (264)
T ss_pred HhCCCCCCccCHHHHHHHHHcCCCCCCCC---------------------------cccCHHHHHHHHHHhc-CcccCcc
Confidence 9999999876544433333211 111111 1455679999999999 5799999
Q ss_pred HHHHHHHHH
Q 001143 1122 AGDLYEMFV 1130 (1141)
Q Consensus 1122 a~ElL~~L~ 1130 (1141)
+.+++.|+|
T Consensus 255 ~~~~~~~~~ 263 (264)
T cd06653 255 AEFLLRHPF 263 (264)
T ss_pred HHHHhcCCC
Confidence 999999986
No 322
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=1.8e-32 Score=302.34 Aligned_cols=250 Identities=23% Similarity=0.266 Sum_probs=191.0
Q ss_pred eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHH-hhCCCCCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRML-GALRHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL-~~L~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
+.||+|+||.||+|.+ .+..+|+|+...... ....... .+..|..++ ...+||||+++++++...+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~-~~~~~~~----~~~~e~~~~~~~~~~~~i~~~~~~~~~~~------ 70 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDM-IAKNQVT----NVKAERAIMMIQGESPYVAKLYYSFQSKD------ 70 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhh-hHHHHHH----HHHHHHHHHhhcCCCCCeeeeeeeEEcCC------
Confidence 5799999999999998 456788887532110 0011111 124555544 4458999999999998654
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
..++||||+++++|.++++. ...+++..+..++.||+.||.|||+.+++||||+|+||+++.+
T Consensus 71 --------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~---- 133 (260)
T cd05611 71 --------YLYLVMEYLNGGDCASLIKT-----LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQT---- 133 (260)
T ss_pred --------eEEEEEeccCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCC----
Confidence 34999999999999999976 2368999999999999999999999999999999999999877
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
+.++|+|||.+..... .....+++.|+|||.+.+ ..++.++||||||+++|+|++|..|
T Consensus 134 ---~~~~l~dfg~~~~~~~--------------~~~~~~~~~y~~pe~~~~----~~~~~~~Dv~slG~il~~l~~g~~p 192 (260)
T cd05611 134 ---GHLKLTDFGLSRNGLE--------------NKKFVGTPDYLAPETILG----VGDDKMSDWWSLGCVIFEFLFGYPP 192 (260)
T ss_pred ---CcEEEeecccceeccc--------------cccCCCCcCccChhhhcC----CCCcchhhhHHHHHHHHHHHHCCCC
Confidence 7899999998864322 113357889999999876 3478999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC---CHHHH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP---TAGDL 1125 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP---Sa~El 1125 (1141)
|......+....+....... + .......+..+.+++.+||+.||++|| +++|+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~-~-----------------------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~ 248 (260)
T cd05611 193 FHAETPDAVFDNILSRRINW-P-----------------------EEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEI 248 (260)
T ss_pred CCCCCHHHHHHHHHhcccCC-C-----------------------CcccccCCHHHHHHHHHHccCCHHHccCCCcHHHH
Confidence 98776666555543322110 0 000013566799999999999999999 45799
Q ss_pred HHHHHhhcC
Q 001143 1126 YEMFVARTS 1134 (1141)
Q Consensus 1126 L~~L~~~~~ 1134 (1141)
+.|+|+...
T Consensus 249 l~~~~~~~~ 257 (260)
T cd05611 249 KSHPFFKSI 257 (260)
T ss_pred HcChHhhcC
Confidence 999999754
No 323
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=5e-32 Score=300.68 Aligned_cols=264 Identities=20% Similarity=0.335 Sum_probs=198.4
Q ss_pred ceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~-----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
|++.+.||+|+||.||+|.+. +..+++|+...+. ......+.+ .+|+.++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~----~~E~~~l~~l~h~~i~~~~~~~~~~~ 74 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI--FSSSDIEEF----LREAACMKEFDHPNVIKLIGVSLRSR 74 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc--CChHHHHHH----HHHHHHHhcCCCCCcceEEEEEccCC
Confidence 678899999999999999863 3567887754332 222333333 78999999999999999999886532
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. ......++++||+++++|.+++...... ....+++..+..++.||+.||+|||++||+||||||+||++
T Consensus 75 ~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili 146 (273)
T cd05074 75 AK--------GRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCML 146 (273)
T ss_pred CC--------CcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEE
Confidence 11 1122458899999999999887542211 12357899999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||.++........ .......+++.|++||.+.. ..++.++|||||||++|+
T Consensus 147 ~~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~~~~pe~~~~----~~~~~~sDi~slG~il~e 207 (273)
T cd05074 147 NEN-------MTVCVADFGLSKKIYSGDYY--------RQGCASKLPVKWLALESLAD----NVYTTHSDVWAFGVTMWE 207 (273)
T ss_pred cCC-------CCEEECcccccccccCCcce--------ecCCCccCchhhcCHhHHhc----CccchhhhhHHHHHHHHH
Confidence 876 78999999998765321110 01112235678999999875 457789999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++ |+.||.+....+....+......... ...+..+.+++.+||..+|++||
T Consensus 208 l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~l~~~~l~~~p~~Rp 260 (273)
T cd05074 208 IMTRGQTPYAGVENSEIYNYLIKGNRLKQP---------------------------PDCLEDVYELMCQCWSPEPKCRP 260 (273)
T ss_pred HhhCCCCCCCCCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHHHcCCChhhCc
Confidence 999 89999877666555554433221110 13456799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
++.++++.+..
T Consensus 261 s~~~~~~~l~~ 271 (273)
T cd05074 261 SFQHLRDQLEL 271 (273)
T ss_pred CHHHHHHHHHh
Confidence 99999998764
No 324
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=2.2e-32 Score=306.45 Aligned_cols=258 Identities=28% Similarity=0.453 Sum_probs=205.0
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
....|++.+.||+|++|.||+|.+. +..+++|+...... ..+. +.+|++++++++|+||+++++++...
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~ 87 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-----NKEL----IINEILIMKDCKHPNIVDYYDSYLVG 87 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-----hHHH----HHHHHHHHHHCCCCCeeEEEEEEEEC
Confidence 3456889999999999999999985 66778887643321 2223 37899999999999999999998865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+++++|.+++... . ..+++..+..++.|++.||.|||+.||+|+||+|+||++
T Consensus 88 ~--------------~~~lv~e~~~~~~L~~~l~~~---~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i 149 (286)
T cd06614 88 D--------------ELWVVMEYMDGGSLTDIITQN---F-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILL 149 (286)
T ss_pred C--------------EEEEEEeccCCCcHHHHHHHh---c-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEE
Confidence 4 359999999999999999862 1 369999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.++|+|||.+........ ......++..|+|||++.+ ..++.++|||||||++|+
T Consensus 150 ~~~-------~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Dv~slGvil~~ 208 (286)
T cd06614 150 SKD-------GSVKLADFGFAAQLTKEKS----------KRNSVVGTPYWMAPEVIKR----KDYGPKVDIWSLGIMCIE 208 (286)
T ss_pred cCC-------CCEEECccchhhhhccchh----------hhccccCCcccCCHhHhcC----CCCCCccccHHHHHHHHH
Confidence 877 7899999998865432111 1123347889999999875 457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|++|+.||...........+.....+.... ....+..+.+++.+||+.+|.+||+
T Consensus 209 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~~p~~Rpt 263 (286)
T cd06614 209 MAEGEPPYLREPPLRALFLITTKGIPPLKN-------------------------PEKWSPEFKDFLNKCLVKDPEKRPS 263 (286)
T ss_pred HHhCCCCCCCCCHHHHHHHHHhcCCCCCcc-------------------------hhhCCHHHHHHHHHHhccChhhCcC
Confidence 999999998766554444433222211110 0134567999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
+.++++|+|+...
T Consensus 264 ~~~il~~~~~~~~ 276 (286)
T cd06614 264 AEELLQHPFLKKA 276 (286)
T ss_pred HHHHhhChHhhcc
Confidence 9999999999864
No 325
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=4.7e-32 Score=313.28 Aligned_cols=285 Identities=20% Similarity=0.223 Sum_probs=202.9
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|.+. +..+|+|+.... ..... ....+.+|+.++++++||||+++++++.....
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 88 (343)
T cd07880 15 DRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRP--FQSEL----FAKRAYRELRLLKHMKHENVIGLLDVFTPDLS 88 (343)
T ss_pred cceEEEEEeeecCCeEEEEEEECCCCcEEEEEEeccc--ccchH----HHHHHHHHHHHHHhcCCCCccceeeeecCCcc
Confidence 46999999999999999999874 556777764322 11111 12234789999999999999999999875432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. ......++||||+ +++|.+++.. ..+++..++.++.||+.||.|||+.||+||||||+||+++.
T Consensus 89 ~--------~~~~~~~lv~e~~-~~~l~~~~~~------~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~ 153 (343)
T cd07880 89 L--------DRFHDFYLVMPFM-GTDLGKLMKH------EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE 153 (343)
T ss_pred c--------cccceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence 1 1223568999999 6899888764 36899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.++|+|||++...... .....+++.|+|||.+.+ ...++.++|||||||++|+|+
T Consensus 154 ~-------~~~kl~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~ll~~l~ 210 (343)
T cd07880 154 D-------CELKILDFGLARQTDSE-------------MTGYVVTRWYRAPEVILN---WMHYTQTVDIWSVGCIMAEML 210 (343)
T ss_pred C-------CCEEEeecccccccccC-------------ccccccCCcccCHHHHhC---CCCCCcHHHHHHHHHHHHHHH
Confidence 7 78999999998654321 112357889999999865 134678999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCC---chhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK---PEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|..||.+.........+................................ .......+..+.+++.+||+.||.+||
T Consensus 211 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~ 290 (343)
T cd07880 211 TGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRI 290 (343)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCC
Confidence 99999987665444433322221111111110000000000000000000 011124566799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
|+.++++|+|+...
T Consensus 291 t~~~~l~~~~~~~~ 304 (343)
T cd07880 291 TAAEALAHPYFEEF 304 (343)
T ss_pred CHHHHhcCccHhhh
Confidence 99999999999754
No 326
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.7e-32 Score=305.82 Aligned_cols=282 Identities=22% Similarity=0.261 Sum_probs=200.6
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|++.+.||+|++|.||+|++. +..+++|+..... ........ +.+|+.++++++||||+++++++....
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~--~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 71 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN--EKEGFPIT----AIREIKLLQKLRHPNIVRLKEIVTSKG--- 71 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc--ccccchHH----HHHHHHHHHhccCCCeeeheeeEecCC---
Confidence 688999999999999999985 4667777765332 11122222 378999999999999999999987641
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
....++||||++ ++|.+++.. ....+++..++.++.||+.||+|||++|++|+||||+||+++.+
T Consensus 72 ---------~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~- 136 (287)
T cd07840 72 ---------KGSIYMVFEYMD-HDLTGLLDS----PEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINND- 136 (287)
T ss_pred ---------CCcEEEEecccc-ccHHHHHhc----cCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCC-
Confidence 124599999997 589888865 12469999999999999999999999999999999999999987
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.++|+|||.+......... ......++..|+|||.+.+ ...++.++||||||+++|+|++|
T Consensus 137 ------~~~~l~d~g~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~---~~~~~~~~Dv~slG~~l~el~t~ 198 (287)
T cd07840 137 ------GVLKLADFGLARPYTKRNSA---------DYTNRVITLWYRPPELLLG---ATRYGPEVDMWSVGCILAELFLG 198 (287)
T ss_pred ------CCEEEccccceeeccCCCcc---------cccccccccccCCceeeEc---cccCChHHHHHHHHHHHHHHHhC
Confidence 78999999998765432210 1112346788999998765 23567999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCC--CCchhhhh-hHHHHHHHHHHhcccCCCCCCCH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGF--EKPEAELE-TLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+.||...........+...........+.................. ...+.... .+..+.+++.+||..||.+||++
T Consensus 199 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~ 278 (287)
T cd07840 199 KPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISA 278 (287)
T ss_pred CCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCH
Confidence 9999877765555544322111111111100000000000000000 00000112 26789999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.++++++|+
T Consensus 279 ~~~l~~~~~ 287 (287)
T cd07840 279 DQALQHEYF 287 (287)
T ss_pred HHHhhCcCC
Confidence 999999885
No 327
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.8e-34 Score=346.38 Aligned_cols=266 Identities=23% Similarity=0.298 Sum_probs=214.9
Q ss_pred CCCceEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
-++|.+.++||+|+||.|..++++.+ -+|+|+ +.+...- ..+..- |..|-.+|..-..+-||.++-.|.++
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~--lnK~eMlKr~~tA~----F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKI--LNKWEMLKRAETAC----FREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHH--hhHHHHhhchhHHH----HHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 35789999999999999999998654 455555 3321110 111222 36788888888899999999999887
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.++ |+|||||+||+|-.++.++ .++++..++.++..|+.||.-||+.|+|||||||+|||+
T Consensus 148 ~~L--------------YlVMdY~pGGDlltLlSk~-----~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl 208 (1317)
T KOG0612|consen 148 RYL--------------YLVMDYMPGGDLLTLLSKF-----DRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL 208 (1317)
T ss_pred cce--------------EEEEecccCchHHHHHhhc-----CCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe
Confidence 755 9999999999999999873 369999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC-CCCCchhhHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP-NLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~-~~~s~ksDVWSLGviL~ 1040 (1141)
|.. |++||+|||.|..+..... -.....+|||.|.+||++..+..+ +.|++.+|+||+||++|
T Consensus 209 d~~-------GHikLADFGsClkm~~dG~---------V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~Y 272 (1317)
T KOG0612|consen 209 DKS-------GHIKLADFGSCLKMDADGT---------VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMY 272 (1317)
T ss_pred ccc-------CcEeeccchhHHhcCCCCc---------EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHH
Confidence 998 9999999999987764332 223466899999999999887766 78999999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
||+.|..||...+..+.+..|..... .+..| ....++.++++||.+.+. +|+.|.
T Consensus 273 EMlyG~TPFYadslveTY~KIm~hk~-----------------------~l~FP-~~~~VSeeakdLI~~ll~-~~e~RL 327 (1317)
T KOG0612|consen 273 EMLYGETPFYADSLVETYGKIMNHKE-----------------------SLSFP-DETDVSEEAKDLIEALLC-DREVRL 327 (1317)
T ss_pred HHHcCCCcchHHHHHHHHHHHhchhh-----------------------hcCCC-cccccCHHHHHHHHHHhc-Chhhhc
Confidence 99999999998888888877743311 11122 122578889999999884 788888
Q ss_pred C---HHHHHHHHHhhcCCC
Q 001143 1121 T---AGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1121 S---a~ElL~~L~~~~~s~ 1136 (1141)
. ++++-.|+||..-.|
T Consensus 328 grngiedik~HpFF~g~~W 346 (1317)
T KOG0612|consen 328 GRNGIEDIKNHPFFEGIDW 346 (1317)
T ss_pred ccccHHHHHhCccccCCCh
Confidence 7 999999999976543
No 328
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.7e-32 Score=302.50 Aligned_cols=261 Identities=22% Similarity=0.340 Sum_probs=198.4
Q ss_pred CceEeeeecccCceEEEEEEECC---ccEEEEEEecccCCCCh--HHHHHhHHhHHHHHHHHhh-CCCCCccceeeeEec
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGS---ADAAAKVRTLKVCGSSA--DEIRNFEYSCLGEVRMLGA-LRHSCIVEMYGHKIS 880 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~---~~vAvKI~~l~~~~~~~--~~~~~~~~~~~~Ei~iL~~-L~HpNIVkllg~~~~ 880 (1141)
.|++.+.||+|+||.||+|.+.. ..+++|........... .........+.+|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47889999999999999999854 66788865433211110 0111111233688888875 689999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCe
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENI 959 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NI 959 (1141)
.+ ..++||||+++++|.+++...... ...+++..++.++.|++.||.|||+ .+++||||+|+||
T Consensus 81 ~~--------------~~~lv~e~~~~~~l~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~ni 145 (269)
T cd08528 81 ND--------------RLYIVMDLIEGAPLGEHFNSLKEK-KQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNI 145 (269)
T ss_pred CC--------------eEEEEEecCCCCcHHHHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHE
Confidence 54 349999999999999998654333 3469999999999999999999996 7899999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.++|+|||.+....... ......|+..|+|||.+.+ ..++.++||||||+++
T Consensus 146 l~~~~-------~~~~l~dfg~~~~~~~~~-----------~~~~~~~~~~~~~Pe~~~~----~~~~~~~Dv~slG~ll 203 (269)
T cd08528 146 MLGED-------DKVTITDFGLAKQKQPES-----------KLTSVVGTILYSCPEIVKN----EPYGEKADVWAFGCIL 203 (269)
T ss_pred EECCC-------CcEEEecccceeeccccc-----------ccccccCcccCcChhhhcC----CCCchHHHHHHHHHHH
Confidence 99887 789999999987643321 1123458889999999876 4578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|+.||...........+.......... ...+..+.+++.+||+.||++|
T Consensus 204 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~cl~~~p~~R 257 (269)
T cd08528 204 YQMCTLQPPFYSTNMLSLATKIVEAVYEPLPE--------------------------GMYSEDVTDVITSCLTPDAEAR 257 (269)
T ss_pred HHHHhCCCcccccCHHHHHHHHhhccCCcCCc--------------------------ccCCHHHHHHHHHHCCCCCccC
Confidence 99999999998766555544443322211110 1345679999999999999999
Q ss_pred CCHHHHHHHHH
Q 001143 1120 PTAGDLYEMFV 1130 (1141)
Q Consensus 1120 PSa~ElL~~L~ 1130 (1141)
|++.|+.+++.
T Consensus 258 p~~~e~~~~~~ 268 (269)
T cd08528 258 PDIIQVSAMIS 268 (269)
T ss_pred CCHHHHHHHhc
Confidence 99999998763
No 329
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1.8e-32 Score=314.93 Aligned_cols=299 Identities=17% Similarity=0.212 Sum_probs=203.8
Q ss_pred CCCce-EeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChH------HHHHhHHhHHHHHHHHhhCCCCCcccee
Q 001143 805 FPSLS-SCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSAD------EIRNFEYSCLGEVRMLGALRHSCIVEMY 875 (1141)
Q Consensus 805 ~~~y~-i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~------~~~~~~~~~~~Ei~iL~~L~HpNIVkll 875 (1141)
.++|. +.+.||+|+||+||+|.+. +..+|+|+.+......... ....+...+.+|+.++++++||||++++
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~ 86 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLV 86 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeee
Confidence 34564 5678999999999999874 5678888754332211000 0001112347899999999999999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 955 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLK 955 (1141)
+++..... .++||||++ ++|.+++.. ...+++..+..++.||+.||.|||+.||+||||+
T Consensus 87 ~~~~~~~~--------------~~lv~e~~~-~~l~~~l~~-----~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~ 146 (335)
T PTZ00024 87 DVYVEGDF--------------INLVMDIMA-SDLKKVVDR-----KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLS 146 (335)
T ss_pred EEEecCCc--------------EEEEEeccc-cCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccc
Confidence 99876553 499999997 699998865 3468999999999999999999999999999999
Q ss_pred CCCeeeecccccCCCCCeEEEeecccccccccccccccccc----CCCCCCCCccCCCcccchhhhccccCCCCCCchhh
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH----RGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVD 1031 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~----~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksD 1031 (1141)
|+||+++.+ +.++|+|||.+.............. ..........+++.|+|||.+.+ ...++.++|
T Consensus 147 ~~nill~~~-------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~D 216 (335)
T PTZ00024 147 PANIFINSK-------GICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG---AEKYHFAVD 216 (335)
T ss_pred HHHeEECCC-------CCEEECCccceeecccccccccccccccccccccccccccccCCCCChhccc---CCCCCcHHH
Confidence 999999877 7899999999976542110000000 00011122346889999999865 234678999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001143 1032 IWSYGCLLLELLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1110 (1141)
Q Consensus 1032 VWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~ 1110 (1141)
||||||++|+|++|+.||.+.+..+....+.. ...+.. ..+...........................+..+.+++.+
T Consensus 217 v~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 295 (335)
T PTZ00024 217 MWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNE-DNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQS 295 (335)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCch-hhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHH
Confidence 99999999999999999987776655544422 111111 0000000000000000000000001111346778999999
Q ss_pred hcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1111 CTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1111 cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
||+.||++|||++|++.|+|++..
T Consensus 296 ~l~~~P~~R~s~~~~l~~~~~~~~ 319 (335)
T PTZ00024 296 LLKLNPLERISAKEALKHEYFKSD 319 (335)
T ss_pred HcCCCchhccCHHHHhcCcccCCC
Confidence 999999999999999999999854
No 330
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=3.3e-32 Score=309.23 Aligned_cols=292 Identities=18% Similarity=0.182 Sum_probs=201.6
Q ss_pred ceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
|.+.+.+|.|+++.||++...+..+|+|+..... ......+. +.+|+.++++++||||+++++++.....
T Consensus 4 ~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~--~~~~~~~~----~~~Ei~~l~~l~h~~i~~~~~~~~~~~~---- 73 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDS--CSKEDLKL----LQQEIITSRQLQHPNILPYVTSFIVDSE---- 73 (314)
T ss_pred hhhhHhhcCCceEEEEEecCCCCEEEEEEEeccc--cchhHHHH----HHHHHHHHHhcCCcchhhhhheeecCCe----
Confidence 3556667777777777777778888998865431 12233333 4899999999999999999999876553
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 967 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~ 967 (1141)
.+++|||+++++|.+++.... ...+++..+..++.||+.||+|||+++|+||||||+||+++.+
T Consensus 74 ----------~~~~~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~--- 137 (314)
T cd08216 74 ----------LYVVSPLMAYGSCEDLLKTHF---PEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGD--- 137 (314)
T ss_pred ----------EEEEEeccCCCCHHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecC---
Confidence 499999999999999998632 2358899999999999999999999999999999999999877
Q ss_pred CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001143 968 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1047 (1141)
Q Consensus 968 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~ 1047 (1141)
+.+||+|||.+........... ..........++..|+|||++.... ..++.++|||||||++|+|++|+.
T Consensus 138 ----~~~kl~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~y~aPE~~~~~~--~~~~~~~Diws~G~il~el~~g~~ 208 (314)
T cd08216 138 ----GKVVLSGLRYSVSMIKHGKRQR---VVHDFPKSSVKNLPWLSPEVLQQNL--QGYNEKSDIYSVGITACELANGHV 208 (314)
T ss_pred ----CceEEecCccceeecccccccc---ccccccccccccccccCHHHhcCCC--CCCCcchhHHHHHHHHHHHHhCCC
Confidence 7899999999876533221100 0011123345788899999986521 347789999999999999999999
Q ss_pred CCCCCCHHHHH-HHHHhCCCCCchhH-HhhhccCcccc---ccccCCCC-CCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1048 PYMGLSELEIH-DLIQMGKRPRLTDE-LEALGSCHEHE---VAQSGSGF-EKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1048 Pf~~~~~~el~-~~I~~~~~p~l~~~-l~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
||......... +.+.......+... ........... ........ .........+.++.+++.+||..||++|||
T Consensus 209 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 288 (314)
T cd08216 209 PFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPS 288 (314)
T ss_pred CCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcC
Confidence 99865544322 22221111110000 00000000000 00000000 000111244677899999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
+.++++|+|+...
T Consensus 289 ~~~ll~~p~~~~~ 301 (314)
T cd08216 289 ASQLLNHSFFKQC 301 (314)
T ss_pred HHHHhcCchHhhh
Confidence 9999999999754
No 331
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=1.5e-32 Score=303.48 Aligned_cols=246 Identities=23% Similarity=0.401 Sum_probs=181.2
Q ss_pred eeecccCceEEEEEEECCc---------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 812 DEAGKSVSSSLFRCKFGSA---------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~~---------~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+.||+|+||.||+|.+... .+++|+. ... . ......+..|+.+++.+.||||+++++++....
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~--~~~--~----~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~ 72 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVL--DKS--H----RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD 72 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhh--cch--h----HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC
Confidence 4799999999999987422 2444432 111 1 112223478999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .++||||+++|+|.++++.. ...+++..+..++.||+.||+|||++||+||||||+||+++
T Consensus 73 ~--------------~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~ 134 (258)
T cd05078 73 E--------------SIMVQEYVKFGSLDTYLKKN----KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLI 134 (258)
T ss_pred C--------------cEEEEecCCCCcHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEe
Confidence 3 38999999999999999751 23589999999999999999999999999999999999998
Q ss_pred ccccc-CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 963 LERKK-ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 963 ~~~~~-~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
.++.. ....+.++++|||.+..... .....+++.|+|||++.+ ...++.++|||||||++|+
T Consensus 135 ~~~~~~~~~~~~~~l~d~g~~~~~~~--------------~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~~l~~ 197 (258)
T cd05078 135 REEDRKTGNPPFIKLSDPGISITVLP--------------KEILLERIPWVPPECIEN---PQNLSLAADKWSFGTTLWE 197 (258)
T ss_pred cccccccCCCceEEecccccccccCC--------------chhccccCCccCchhccC---CCCCCchhhHHHHHHHHHH
Confidence 76321 11224589999998854322 113457889999999875 2346789999999999999
Q ss_pred HHhC-CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTL-QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTG-k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++| ..||.............. ...++ .....++.+++.+||+.||++||
T Consensus 198 l~~g~~~~~~~~~~~~~~~~~~~--~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~Rp 248 (258)
T cd05078 198 IFSGGDKPLSALDSQKKLQFYED--RHQLP---------------------------APKWTELANLINQCMDYEPDFRP 248 (258)
T ss_pred HHcCCCCChhhccHHHHHHHHHc--cccCC---------------------------CCCcHHHHHHHHHHhccChhhCC
Confidence 9998 466655443332221111 11110 02335689999999999999999
Q ss_pred CHHHHHHHH
Q 001143 1121 TAGDLYEMF 1129 (1141)
Q Consensus 1121 Sa~ElL~~L 1129 (1141)
|++++++.+
T Consensus 249 s~~~il~~l 257 (258)
T cd05078 249 SFRAIIRDL 257 (258)
T ss_pred CHHHHHHhc
Confidence 999999875
No 332
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=4e-32 Score=295.13 Aligned_cols=251 Identities=29% Similarity=0.489 Sum_probs=199.1
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|++|.||++.+. +..+++|+...... ..... +.+|+.++++++||||+++++.+....
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 70 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK----EKKEK----IINEIQILKKCKHPNIVKYYGSYLKKD-- 70 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch----hHHHH----HHHHHHHHHhCCCCCEeEEEEEEecCC--
Confidence 4889999999999999999985 55677776543211 22233 378999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..+++|||+++++|.+++... ...+++..+..++.|++.||.|||++|++||||+|+||+++.+
T Consensus 71 ------------~~~l~~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~ 134 (253)
T cd05122 71 ------------ELWIVMEFCSGGSLKDLLKST----NQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSD 134 (253)
T ss_pred ------------eEEEEEecCCCCcHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccC
Confidence 349999999999999998761 1468999999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+........ .....++..|+|||.+.+ ..++.++||||||+++++|++
T Consensus 135 -------~~~~l~d~~~~~~~~~~~~-----------~~~~~~~~~~~~PE~~~~----~~~~~~~Dv~slG~il~~l~~ 192 (253)
T cd05122 135 -------GEVKLIDFGLSAQLSDTKA-----------RNTMVGTPYWMAPEVING----KPYDYKADIWSLGITAIELAE 192 (253)
T ss_pred -------CeEEEeecccccccccccc-----------ccceecCCcccCHHHHcC----CCCCccccHHHHHHHHHHHHh
Confidence 7899999999876543210 123458889999999876 447889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||...+..+....+.....+..... ...+..+.+++.+||+.||.+|||+.+
T Consensus 193 g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~i~~~l~~~p~~R~t~~~ 247 (253)
T cd05122 193 GKPPYSELPPMKALFKIATNGPPGLRNP-------------------------EKWSDEFKDFLKKCLQKNPEKRPTAEQ 247 (253)
T ss_pred CCCCCCCCchHHHHHHHHhcCCCCcCcc-------------------------cccCHHHHHHHHHHccCChhhCCCHHH
Confidence 9999987655444433332222211110 023567999999999999999999999
Q ss_pred HHHHHH
Q 001143 1125 LYEMFV 1130 (1141)
Q Consensus 1125 lL~~L~ 1130 (1141)
+++|+|
T Consensus 248 ~l~~~~ 253 (253)
T cd05122 248 LLKHPF 253 (253)
T ss_pred HhcCCC
Confidence 999976
No 333
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=3.6e-32 Score=313.91 Aligned_cols=296 Identities=22% Similarity=0.263 Sum_probs=202.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||.|+||.||+|.+. +..+++|...... . ...+. +.+|++++++++||||+++++.+.....
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~--~--~~~~~----~~~Ei~~l~~l~h~~i~~~~~~~~~~~~ 76 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTD--P--QSVKH----ALREIKIIRRLDHDNIVKVYEVLGPSGS 76 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCC--C--chHHH----HHHHHHHHHhcCCCcchhhHhhhccccc
Confidence 57999999999999999999985 4566666644332 1 22223 3789999999999999999988765321
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
....+-.........++||||++ ++|.+++.. ..+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 77 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~ 149 (342)
T cd07854 77 DLTEDVGSLTELNSVYIVQEYME-TDLANVLEQ------GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT 149 (342)
T ss_pred ccccccccccccceEEEEeeccc-ccHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC
Confidence 10000001112335799999997 688888753 35899999999999999999999999999999999999975
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
++ ..+||+|||.+..+...... ........++..|+|||.+.+ ...++.++|||||||++|+|+
T Consensus 150 ~~------~~~kl~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwSlGvil~el~ 213 (342)
T cd07854 150 ED------LVLKIGDFGLARIVDPHYSH-------KGYLSEGLVTKWYRSPRLLLS---PNNYTKAIDMWAAGCIFAEML 213 (342)
T ss_pred CC------ceEEECCcccceecCCcccc-------ccccccccccccccCHHHHhC---ccccCchhhHHHHHHHHHHHH
Confidence 42 57899999998765322111 001122357889999998754 245778999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCC--chhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK--PEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
+|+.||.+....+....+................................ .......+.++.+++.+||+.||.+|||
T Consensus 214 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t 293 (342)
T cd07854 214 TGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLT 293 (342)
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccC
Confidence 99999987766555444432221111111100000000000000000000 0111245677899999999999999999
Q ss_pred HHHHHHHHHhh
Q 001143 1122 AGDLYEMFVAR 1132 (1141)
Q Consensus 1122 a~ElL~~L~~~ 1132 (1141)
+.+++.|+|+.
T Consensus 294 ~~ell~h~~~~ 304 (342)
T cd07854 294 AEEALMHPYMS 304 (342)
T ss_pred HHHHhCCCccc
Confidence 99999999997
No 334
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=5e-32 Score=313.29 Aligned_cols=284 Identities=19% Similarity=0.232 Sum_probs=200.8
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|.+. +..+|+|... .........+ .+.+|+.++++++||||+++++++.....
T Consensus 17 ~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~--~~~~~~~~~~----~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~ 90 (345)
T cd07877 17 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLS--RPFQSIIHAK----RTYRELRLLKHMKHENVIGLLDVFTPARS 90 (345)
T ss_pred CceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEec--CcchhhHHHH----HHHHHHHHHHHcCCCcccceeeeeeeccc
Confidence 67999999999999999999874 4556666543 2111111122 34789999999999999999998865432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. ......+++++++ +++|.++++. ..+++..+..++.||+.||+|||++||+||||||+||+++.
T Consensus 91 ~--------~~~~~~~lv~~~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~ 155 (345)
T cd07877 91 L--------EEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 155 (345)
T ss_pred c--------cccccEEEEehhc-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC
Confidence 1 1122458899987 6899888764 35899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++...... .....++..|+|||.+.+ ...++.++|||||||++|+|+
T Consensus 156 ~-------~~~kl~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~---~~~~~~~~DvwslG~il~el~ 212 (345)
T cd07877 156 D-------CELKILDFGLARHTDDE-------------MTGYVATRWYRAPEIMLN---WMHYNQTVDIWSVGCIMAELL 212 (345)
T ss_pred C-------CCEEEeccccccccccc-------------ccccccCCCccCHHHHhC---ccCCCchhhHHHHHHHHHHHH
Confidence 7 78999999998653221 112357889999999865 235678999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcccccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|+.||...+.......+........+................. .......+.....+..+.++|.+||+.||.+||
T Consensus 213 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~ 292 (345)
T cd07877 213 TGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI 292 (345)
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcC
Confidence 99999987665554444432222211111111100000000000 000000011113466789999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001143 1121 TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~ 1133 (1141)
++.+++.|+|+..
T Consensus 293 t~~e~l~h~~f~~ 305 (345)
T cd07877 293 TAAQALAHAYFAQ 305 (345)
T ss_pred CHHHHhcChhhhh
Confidence 9999999999974
No 335
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.6e-32 Score=299.88 Aligned_cols=257 Identities=26% Similarity=0.325 Sum_probs=197.6
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 814 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 814 LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
||.|+||.||+|.+. +..+++|+..... ...+.....+.+|+.++++++||||+++++.+....
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~--------- 66 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKAD-----MIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK--------- 66 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchh-----hhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc---------
Confidence 689999999999985 6677777753221 111222334588999999999999999999887544
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 971 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~ 971 (1141)
..|+||||+++++|.+++.+ ...+++..+..++.||+.||.|||++|++||||+|+||+++.+
T Consensus 67 -----~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~------- 129 (265)
T cd05579 67 -----NLYLVMEYLPGGDLASLLEN-----VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSN------- 129 (265)
T ss_pred -----EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCC-------
Confidence 35999999999999999976 2368999999999999999999999999999999999999987
Q ss_pred CeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001143 972 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1051 (1141)
Q Consensus 972 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~ 1051 (1141)
+.++|+|||++.......... ............++..|+|||.... ..++.++||||||+++|+|++|+.||..
T Consensus 130 ~~~~l~dfg~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~Pe~~~~----~~~~~~~Dv~slG~~~~~l~~g~~p~~~ 203 (265)
T cd05579 130 GHLKLTDFGLSKVGLVRRQIN--LNDDEKEDKRIVGTPDYIAPEVILG----QGHSKTVDWWSLGCILYEFLVGIPPFHG 203 (265)
T ss_pred CCEEEEecccchhcccCcccc--cccccccccCcccCccccCHHHhcC----CCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 789999999986533211100 0000111223457889999999876 4477899999999999999999999987
Q ss_pred CCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH---HHHHHH
Q 001143 1052 LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA---GDLYEM 1128 (1141)
Q Consensus 1052 ~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa---~ElL~~ 1128 (1141)
....+....+..+.... +.. ...+..+.+++.+||+.+|.+|||+ .++++|
T Consensus 204 ~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 204 ETPEEIFQNILNGKIEW-PED-------------------------VEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred CCHHHHHHHHhcCCcCC-Ccc-------------------------ccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 77666665554322211 100 0235678999999999999999999 999999
Q ss_pred HHhhc
Q 001143 1129 FVART 1133 (1141)
Q Consensus 1129 L~~~~ 1133 (1141)
+|+..
T Consensus 258 ~~~~~ 262 (265)
T cd05579 258 PFFKG 262 (265)
T ss_pred ccccC
Confidence 99964
No 336
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=3.2e-32 Score=303.19 Aligned_cols=278 Identities=23% Similarity=0.280 Sum_probs=199.8
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|++.+.||+|++|.||+|.+. +..+++|...... ...... ..+.+|+.++++++||||+++++++....
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~----~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--- 71 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRF--ESEGIP----KTALREIKLLKELNHPNIIKLLDVFRHKG--- 71 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEecccc--ccchhH----HHHHHHHHHHHHhcCCCcchHHHhhccCC---
Confidence 678899999999999999984 5556666543221 111112 23478999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
..++||||++ ++|.+++... ...+++..+..++.||+.||.|||+++|+|+||||+||+++.+
T Consensus 72 -----------~~~~v~e~~~-~~l~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~- 134 (283)
T cd05118 72 -----------DLYLVFEFMD-TDLYKLIKDR----QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTE- 134 (283)
T ss_pred -----------CEEEEEeccC-CCHHHHHHhh----cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCC-
Confidence 3499999997 5888887651 2468999999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.++|+|||.+........ ......++..|+|||.+.+ ...++.++||||||+++|+|++|
T Consensus 135 ------~~~~l~df~~~~~~~~~~~----------~~~~~~~~~~~~~PE~~~~---~~~~~~~~Di~slG~~l~~l~tg 195 (283)
T cd05118 135 ------GVLKLADFGLARSFGSPVR----------PYTHYVVTRWYRAPELLLG---DKGYSTPVDIWSVGCIFAELLSR 195 (283)
T ss_pred ------CcEEEeeeeeeEecCCCcc----------cccCccCcccccCcHHHhc---CCCCCchhHHHHHHHHHHHHHhC
Confidence 7899999999876543210 0112357889999999875 23578999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcc---CccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGS---CHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+.||...+..+....+........+..+..... ........ .............+..+.++|.+||+.||.+||++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~ 274 (283)
T cd05118 196 RPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPK-KAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITA 274 (283)
T ss_pred CCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhcc-ccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCH
Confidence 999987766555444422111111111111000 00000000 00001111223567889999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.+++.|+|+
T Consensus 275 ~~ll~~~~~ 283 (283)
T cd05118 275 EQALAHPYF 283 (283)
T ss_pred HHHhhCCCC
Confidence 999999985
No 337
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=6.6e-32 Score=310.21 Aligned_cols=288 Identities=19% Similarity=0.234 Sum_probs=201.0
Q ss_pred CceEeeeecccCceEEEEEEECC----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGS----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 881 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~ 881 (1141)
+|++.+.||+|+||.||+|++.. ..+|+|..... .......+ .+.+|+.+++++ +||||+++++.....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~--~~~~~~~~----~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 74 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNV--FSKKILAK----RALRELKLLRHFRGHKNITCLYDMDIVF 74 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccc--cccchhHH----HHHHHHHHHHHhcCCCChheeeeeeeec
Confidence 48899999999999999999854 46777764321 11112222 237899999999 599999999875432
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ......+++|||+. ++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 75 ~----------~~~~~~~~~~e~~~-~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili 138 (332)
T cd07857 75 P----------GNFNELYLYEELME-ADLHQIIRS-----GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV 138 (332)
T ss_pred c----------ccCCcEEEEEeccc-CCHHHHHhc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEE
Confidence 1 01224589999986 799988864 3468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||.++.+...... .........||+.|+|||++.+ ...++.++|||||||++|+
T Consensus 139 ~~~-------~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~~Di~slGv~l~~ 202 (332)
T cd07857 139 NAD-------CELKICDFGLARGFSENPGE------NAGFMTEYVATRWYRAPEIMLS---FQSYTKAIDVWSVGCILAE 202 (332)
T ss_pred cCC-------CCEEeCcCCCceeccccccc------ccccccCcccCccccCcHHHhC---CCCCCcHHHHHHHHHHHHH
Confidence 887 78999999999765432111 0011123468999999998764 2357899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcccccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|++|+.||...+.......+...........+.............. ......+......+..+.+++.+||+.||.+
T Consensus 203 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~ 282 (332)
T cd07857 203 LLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTK 282 (332)
T ss_pred HHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCccc
Confidence 9999999987666555544432221111111111100000000000 0000001111134667999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001143 1119 RPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~ 1132 (1141)
|||+.+++.|+|+.
T Consensus 283 R~t~~~ll~~~~~~ 296 (332)
T cd07857 283 RISVEEALEHPYLA 296 (332)
T ss_pred CCCHHHHhcChhhh
Confidence 99999999999986
No 338
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=6.4e-32 Score=308.31 Aligned_cols=258 Identities=26% Similarity=0.404 Sum_probs=198.9
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|+..+.||+|+||.||+|++. +..+++|+..... ........ .+.+|++++++++|||++++++++.+...
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~-~~~~~~~~----~~~~e~~~l~~l~h~~iv~~~~~~~~~~~- 99 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSG-KQSNEKWQ----DIIKEVKFLQRIKHPNSIEYKGCYLREHT- 99 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCC-CCchHHHH----HHHHHHHHHHhCCCCCEEEEEEEEeeCCe-
Confidence 4788999999999999999974 4556666643221 11122222 34789999999999999999999876543
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.++||||++ |+|.+++... ..++++..+..++.||+.||.|||++||+||||+|+||+++.+
T Consensus 100 -------------~~lv~e~~~-g~l~~~~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~ 161 (317)
T cd06635 100 -------------AWLVMEYCL-GSASDLLEVH----KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP 161 (317)
T ss_pred -------------EEEEEeCCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCC
Confidence 499999997 5888877541 3468999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||++..... .....+++.|+|||++.... ...++.++|||||||++|+|++
T Consensus 162 -------~~~kl~dfg~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~-~~~~~~~~Dv~slGvil~el~~ 219 (317)
T cd06635 162 -------GQVKLADFGSASIASP--------------ANSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAE 219 (317)
T ss_pred -------CCEEEecCCCccccCC--------------cccccCCccccChhhhhcCC-CCCCCccccHHHHHHHHHHHHh
Confidence 7899999998854322 11235788999999975321 2457889999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||...........+.....+... ....++.+.+++.+||+.+|.+||++.+
T Consensus 220 g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~~p~~Rpt~~~ 273 (317)
T cd06635 220 RKPPLFNMNAMSALYHIAQNESPTLQ--------------------------SNEWSDYFRNFVDSCLQKIPQDRPTSEE 273 (317)
T ss_pred CCCCCCCccHHHHHHHHHhccCCCCC--------------------------CccccHHHHHHHHHHccCCcccCcCHHH
Confidence 99999876655554444333222111 0134566899999999999999999999
Q ss_pred HHHHHHhhcCCC
Q 001143 1125 LYEMFVARTSSS 1136 (1141)
Q Consensus 1125 lL~~L~~~~~s~ 1136 (1141)
+++|+|+.....
T Consensus 274 il~~~~~~~~~~ 285 (317)
T cd06635 274 LLKHMFVLRERP 285 (317)
T ss_pred HHhChhhhccCc
Confidence 999999876543
No 339
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6.3e-32 Score=301.48 Aligned_cols=282 Identities=22% Similarity=0.213 Sum_probs=200.6
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEecCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKISSK 882 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkllg~~~~~~ 882 (1141)
|++.+.||+|+||.||+|++. +..+++|+.+.... ....... +.+|+.+++++ .||||+++++++....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~----~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~ 74 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLS--EEGIPLS----TLREIALLKQLESFEHPNIVRLLDVCHGPR 74 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccc--cchhhhh----HHHHHHHHHHhhccCCCCcceEEEEEeecc
Confidence 688999999999999999985 57788887654432 1111122 25677777666 5999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. .....+++|||++ ++|.+++... ....+++..++.++.||+.||.|||+.+++|+||+|+||+++
T Consensus 75 ~~---------~~~~~~l~~e~~~-~~l~~~l~~~---~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~ 141 (287)
T cd07838 75 TD---------RELKLTLVFEHVD-QDLATYLSKC---PKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT 141 (287)
T ss_pred CC---------CCceeEEEehhcc-cCHHHHHHHc---cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc
Confidence 21 2234699999997 5899988752 223589999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+........ .....++..|+|||++.+ ..++.++|||||||++|+|
T Consensus 142 ~~-------~~~~l~dfg~~~~~~~~~~-----------~~~~~~~~~~~~PE~~~~----~~~~~~~Di~s~G~~l~~l 199 (287)
T cd07838 142 SD-------GQVKIADFGLARIYSFEMA-----------LTSVVVTLWYRAPEVLLQ----SSYATPVDMWSVGCIFAEL 199 (287)
T ss_pred cC-------CCEEEeccCcceeccCCcc-----------cccccccccccChHHhcc----CCCCCcchhhhHHHHHHHH
Confidence 87 7899999999876533211 112347889999999876 4578899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|++||......+....+...........+... .......................+..+.+++.+||+.||.+||++
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~ 278 (287)
T cd07838 200 FRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRN-VSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISA 278 (287)
T ss_pred HhCCCcccCCChHHHHHHHHHHcCCCChHhcCCC-cccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCH
Confidence 9999999887766655544221111000000000 000000000000001111122456778999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.+++.|+|+
T Consensus 279 ~~il~~~~~ 287 (287)
T cd07838 279 FEALQHPYF 287 (287)
T ss_pred HHHhcCcCC
Confidence 999999885
No 340
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2e-32 Score=305.67 Aligned_cols=253 Identities=25% Similarity=0.318 Sum_probs=191.3
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 814 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 814 LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
||+|+||+||+|.+. +..+++|+...... ... .....+..|+.++++++||||+++++.+...+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~--~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~--------- 66 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRL--KKR---KGEQMALNEKKILEKVSSRFIVSLAYAFETKD--------- 66 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhh--hhh---hhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC---------
Confidence 699999999999874 56677776542211 111 11223368999999999999999999987654
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 971 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~ 971 (1141)
..|+||||+++++|.+++... ....+++..+..++.|++.||.|||+.|++||||+|+||+++.+
T Consensus 67 -----~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~------- 131 (277)
T cd05577 67 -----DLCLVMTLMNGGDLKYHIYNV---GEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDH------- 131 (277)
T ss_pred -----eEEEEEecCCCCcHHHHHHHc---CcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCC-------
Confidence 349999999999999998762 22368999999999999999999999999999999999999887
Q ss_pred CeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001143 972 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1051 (1141)
Q Consensus 972 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~ 1051 (1141)
+.++|+|||.+....... ......++..|+|||++.+ ..++.++|||||||++|+|++|+.||..
T Consensus 132 ~~~~l~dfg~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~----~~~~~~~Di~slG~il~~l~~g~~p~~~ 196 (277)
T cd05577 132 GNVRISDLGLAVELKGGK-----------KIKGRAGTPGYMAPEVLQG----EVYDFSVDWFALGCTLYEMIAGRSPFRQ 196 (277)
T ss_pred CCEEEccCcchhhhccCC-----------ccccccCCCCcCCHHHhcC----CCCCchhhhHHHHHHHHHHhhCCCCCCC
Confidence 789999999986543211 1123357889999999876 4478899999999999999999999976
Q ss_pred CCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CHHHHH
Q 001143 1052 LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TAGDLY 1126 (1141)
Q Consensus 1052 ~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-----Sa~ElL 1126 (1141)
.........+........ .......++.+.+++.+||+.||.+|| ++.+++
T Consensus 197 ~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll 252 (277)
T cd05577 197 RKEKVEKEELKRRTLEMA------------------------VEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVR 252 (277)
T ss_pred CcccccHHHHHhcccccc------------------------ccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHH
Confidence 433111111111110000 000013466789999999999999999 899999
Q ss_pred HHHHhhcC
Q 001143 1127 EMFVARTS 1134 (1141)
Q Consensus 1127 ~~L~~~~~ 1134 (1141)
.|+|+..-
T Consensus 253 ~h~~~~~~ 260 (277)
T cd05577 253 EHPLFKDL 260 (277)
T ss_pred hChhhhcC
Confidence 99999643
No 341
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=4.2e-32 Score=298.28 Aligned_cols=245 Identities=23% Similarity=0.362 Sum_probs=182.4
Q ss_pred eeecccCceEEEEEEECCcc------------EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 812 DEAGKSVSSSLFRCKFGSAD------------AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~~~------------vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+.||+|+||.||+|.+.... +++|+.... ...... +.+|+.++++++||||+++++++.
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~ 71 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSD-----HRDSLA----FFETASLMSQLSHKHLVKLYGVCV 71 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccc-----hhhHHH----HHHHHHHHHcCCCcchhheeeEEe
Confidence 47999999999999985433 444443211 111233 378999999999999999999887
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
. .. .++||||+++++|.+++... ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 72 ~-~~--------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Ni 132 (259)
T cd05037 72 R-DE--------------NIMVEEYVKFGPLDVFLHRE----KNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNI 132 (259)
T ss_pred c-CC--------------cEEEEEcCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceE
Confidence 5 32 38999999999999999762 12689999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+.........+||+|||++...... ....++..|+|||++.+.. ..++.++|||||||++
T Consensus 133 ll~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------------~~~~~~~~y~aPE~~~~~~--~~~~~~~Di~slG~~~ 196 (259)
T cd05037 133 LVARYGLNEGYVPFIKLSDPGIPITVLSR--------------EERVERIPWIAPECIRNGQ--ASLTIAADKWSFGTTL 196 (259)
T ss_pred EEecCccccCCceeEEeCCCCcccccccc--------------cccccCCCccChhhhcCCC--CCcchhhHHHHHHHHH
Confidence 99876321122237999999998754321 1234677899999987621 3678999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+|++ |..||......+........... .. .....+.+++.+||..+|.+
T Consensus 197 ~~l~~~~~~p~~~~~~~~~~~~~~~~~~~------------------------~~-----~~~~~~~~li~~~l~~~p~~ 247 (259)
T cd05037 197 LEICSNGEEPLSTLSSSEKERFYQDQHRL------------------------PM-----PDCAELANLINQCWTYDPTK 247 (259)
T ss_pred HHHHhCCCCCcccCCchhHHHHHhcCCCC------------------------CC-----CCchHHHHHHHHHhccChhh
Confidence 99999 57788665433222221111000 00 11256899999999999999
Q ss_pred CCCHHHHHHHH
Q 001143 1119 RPTAGDLYEMF 1129 (1141)
Q Consensus 1119 RPSa~ElL~~L 1129 (1141)
|||+.++++.+
T Consensus 248 Rpt~~~il~~l 258 (259)
T cd05037 248 RPSFRAILRDL 258 (259)
T ss_pred CCCHHHHHHhc
Confidence 99999999865
No 342
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=2.3e-32 Score=303.63 Aligned_cols=263 Identities=24% Similarity=0.303 Sum_probs=202.6
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~ 882 (1141)
++|.+.+.||+|++|.||+|.+ .+..+++|++...... ..... ..+.+|+.++++++ ||||+++++.+...+
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~-~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~ 75 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLI-KEKKV----KYVKIEKEVLTRLNGHPGIIKLYYTFQDEE 75 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhcc-chHHH----HHHHHHHHHHHhcccCCCchhHHHHhcCCc
Confidence 4799999999999999999998 4677888876432111 11112 23478999999998 999999999887654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.+ ...+++..+..|+.|++.||.|||+.|++|+||+|+||+++
T Consensus 76 --------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~ 136 (280)
T cd05581 76 --------------NLYFVLEYAPNGELLQYIRK-----YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD 136 (280)
T ss_pred --------------eEEEEEcCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC
Confidence 34999999999999999976 23699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccc----------cccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCC----------IAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1032 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~----------~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1032 (1141)
.+ +.++|+|||++........... .............++..|+|||+..+ ..++.++||
T Consensus 137 ~~-------~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~----~~~~~~~Di 205 (280)
T cd05581 137 KD-------MHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE----KPAGKSSDL 205 (280)
T ss_pred CC-------CCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC----CCCChhhhH
Confidence 77 7899999999876543221100 00000112234567899999999875 457889999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001143 1033 WSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1112 (1141)
Q Consensus 1033 WSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL 1112 (1141)
||||++++++++|..||...........+...... ++ ...++.+.+++.+||
T Consensus 206 ~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~l 257 (280)
T cd05581 206 WALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYS-FP---------------------------PNFPPDAKDLIEKLL 257 (280)
T ss_pred HHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCC-CC---------------------------CccCHHHHHHHHHHh
Confidence 99999999999999999876654444443321110 00 133566899999999
Q ss_pred ccCCCCCCCH----HHHHHHHHh
Q 001143 1113 EENPTERPTA----GDLYEMFVA 1131 (1141)
Q Consensus 1113 ~~DP~~RPSa----~ElL~~L~~ 1131 (1141)
+.||.+||++ .++++|+|+
T Consensus 258 ~~~p~~R~~~~~~~~~ll~~~~~ 280 (280)
T cd05581 258 VLDPQDRLGVNEGYDELKAHPFF 280 (280)
T ss_pred cCCHhhCCCcccCHHHHhcCCCC
Confidence 9999999999 999999986
No 343
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=6e-32 Score=310.02 Aligned_cols=287 Identities=19% Similarity=0.257 Sum_probs=197.3
Q ss_pred eeeccc--CceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001143 812 DEAGKS--VSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 812 ~~LG~G--sfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
..||+| +||+||+|.+ .+..||+|+..... ......+. +.+|+.+++.++||||+++++++...+.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~--~~~~~~~~----~~~e~~~~~~l~h~niv~~~~~~~~~~~---- 73 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLEN--CTEEHLKA----LQNEVVLSHFFRHPNIMTSWTVFTTGSW---- 73 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEecccc--CCHHHHHH----HHHHHHHHHhCCCCCcceEeeeEecCCc----
Confidence 456776 9999999998 57788888865432 22222333 4789999999999999999999987554
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 967 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~ 967 (1141)
.++||||+.+++|.+++.+.. ...+++..+..++.||+.||+|||++||+||||||+||+++.+
T Consensus 74 ----------~~~v~e~~~~~~l~~~l~~~~---~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~--- 137 (328)
T cd08226 74 ----------LWVISPFMAYGSANSLLKTYF---PEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGD--- 137 (328)
T ss_pred ----------eEEEEecccCCCHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCC---
Confidence 399999999999999988632 2358999999999999999999999999999999999999877
Q ss_pred CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001143 968 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1047 (1141)
Q Consensus 968 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~ 1047 (1141)
+.++++||+.+............ ....+....++..|+|||++.+. ...++.++|||||||++|+|++|+.
T Consensus 138 ----~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~y~aPE~~~~~--~~~~~~~~DiwslG~~l~el~~g~~ 208 (328)
T cd08226 138 ----GLVSLSGLSHLYSLVRNGQKAKV---VYDFPQFSTSVLPWLSPELLRQD--LYGYNVKSDIYSVGITACELATGRV 208 (328)
T ss_pred ----CcEEEechHHHhhhhccCccccc---cccccccccCccCccChhhhcCC--CCCCCchhhHHHHHHHHHHHHhCCC
Confidence 78999999865432221100000 00111223456779999998752 1346799999999999999999999
Q ss_pred CCCCCCHHHHHHHHHhCCCCCchhH------Hhhhcc---Ccc----ccc-c-----ccCCCCCCchhhhhhHHHHHHHH
Q 001143 1048 PYMGLSELEIHDLIQMGKRPRLTDE------LEALGS---CHE----HEV-A-----QSGSGFEKPEAELETLSFLVDVF 1108 (1141)
Q Consensus 1048 Pf~~~~~~el~~~I~~~~~p~l~~~------l~~~~~---~~~----~~~-~-----~~~~~~~~~~~~~~~~~~L~dLI 1108 (1141)
||......+................ ...... ... ... . ...............+..+.+|+
T Consensus 209 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 288 (328)
T cd08226 209 PFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLV 288 (328)
T ss_pred CCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHH
Confidence 9987654443322222111100000 000000 000 000 0 00000001111224677899999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1109 RRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1109 ~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.+||+.||++|||+.|+++|+|+..
T Consensus 289 ~~~l~~dP~~Rpta~e~l~~~~~~~ 313 (328)
T cd08226 289 ELCLQQDPEKRPSASSLLSHAFFKQ 313 (328)
T ss_pred HHHccCCcccCCCHHHHhhCHHHHH
Confidence 9999999999999999999999974
No 344
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=3e-32 Score=307.33 Aligned_cols=294 Identities=20% Similarity=0.204 Sum_probs=202.2
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
..++|++.+.||+|+||.||+|.+. +..+++|+.+...... .. ...+.+|+.++++++||||+++++++.+.
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~--~~----~~~~~~e~~~~~~l~h~~i~~~~~~~~~~ 78 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE--GF----PITAIREIKILRQLNHRNIVNLKEIVTDK 78 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc--Cc----hHHHHHHHHHHHhCCCCCeeeeeheecCc
Confidence 3567999999999999999999984 5667777755432111 11 12236899999999999999999998764
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
..... ........++||||+++ ++...+.. ....+++..+..++.||+.||.|||+.||+||||||+||++
T Consensus 79 ~~~~~----~~~~~~~~~lv~e~~~~-~l~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili 149 (302)
T cd07864 79 QDALD----FKKDKGAFYLVFEYMDH-DLMGLLES----GLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL 149 (302)
T ss_pred chhhh----ccccCCcEEEEEcccCc-cHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 31000 00112257999999984 77777654 13468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||.+......... ......++..|+|||.+.+ ...++.++|||||||++|+
T Consensus 150 ~~~-------~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~---~~~~~~~~Di~slG~~~~e 210 (302)
T cd07864 150 NNK-------GQIKLADFGLARLYNSEESR---------PYTNKVITLWYRPPELLLG---EERYGPAIDVWSCGCILGE 210 (302)
T ss_pred CCC-------CcEEeCcccccccccCCccc---------ccccceeccCccChHHhcC---CCCCCchhHHHHHHHHHHH
Confidence 887 78999999998765432110 1112246788999998864 2346789999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCC--CCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGF--EKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|++|++||......+....+........+..+............+..... .........+..+.+++.+||+.||.+|
T Consensus 211 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 290 (302)
T cd07864 211 LFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKR 290 (302)
T ss_pred HHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhC
Confidence 99999999876665554444332111111111100000000000000000 0000011346779999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001143 1120 PTAGDLYEMFVA 1131 (1141)
Q Consensus 1120 PSa~ElL~~L~~ 1131 (1141)
|++.+++.|+|+
T Consensus 291 p~~~~il~~~~~ 302 (302)
T cd07864 291 CTAEEALNSPWL 302 (302)
T ss_pred CCHHHHhcCCCC
Confidence 999999999885
No 345
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=5.7e-32 Score=295.17 Aligned_cols=256 Identities=32% Similarity=0.483 Sum_probs=199.2
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|++|.||+|.+. +..+++|+..... ......+. +.+|+.++++++||||+++++.+....
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~--~~~~~~~~----~~~e~~~l~~l~~~~i~~~~~~~~~~~-- 72 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSG--DSEEELEA----LEREIRILSSLQHPNIVRYYGSERDEE-- 72 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccc--cchHHHHH----HHHHHHHHHHcCCCCEeeEEEEEecCC--
Confidence 4788999999999999999986 6667777754332 22223333 489999999999999999999987641
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
....++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.|++|+||+|+||+++.+
T Consensus 73 ----------~~~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~ 137 (260)
T cd06606 73 ----------KNTLNIFLEYVSGGSLSSLLKK-----FGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSD 137 (260)
T ss_pred ----------CCeEEEEEEecCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCC
Confidence 1145999999999999999976 2279999999999999999999999999999999999999987
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+......... .......++..|+|||.+.+ ..++.++||||||+++++|++
T Consensus 138 -------~~~~l~d~~~~~~~~~~~~~--------~~~~~~~~~~~y~~pE~~~~----~~~~~~~Dv~slG~il~~l~~ 198 (260)
T cd06606 138 -------GVVKLADFGCAKRLGDIETG--------EGTGSVRGTPYWMAPEVIRG----EEYGRAADIWSLGCTVIEMAT 198 (260)
T ss_pred -------CCEEEcccccEEeccccccc--------ccccCCCCCccccCHhhhcC----CCCCchhhHHHHHHHHHHHHh
Confidence 78999999998765442210 00123458889999999876 347899999999999999999
Q ss_pred CCCCCCCCC-HHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1045 LQVPYMGLS-ELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1045 Gk~Pf~~~~-~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
|..||.... .......+.. ...+. .....+..+.+++.+||..||.+||++
T Consensus 199 g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~l~~~i~~~l~~~p~~Rp~~ 251 (260)
T cd06606 199 GKPPWSELGNPMAALYKIGSSGEPPE---------------------------IPEHLSEEAKDFLRKCLRRDPKKRPTA 251 (260)
T ss_pred CCCCCCCCCchHHHHHhccccCCCcC---------------------------CCcccCHHHHHHHHHhCcCChhhCCCH
Confidence 999997654 2222222111 01111 011346679999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.++++|+|+
T Consensus 252 ~~ll~~~~~ 260 (260)
T cd06606 252 DELLQHPFL 260 (260)
T ss_pred HHHhhCCCC
Confidence 999999985
No 346
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=3.4e-32 Score=304.61 Aligned_cols=251 Identities=21% Similarity=0.258 Sum_probs=186.2
Q ss_pred eecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCC
Q 001143 813 EAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGN 890 (1141)
Q Consensus 813 ~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~ 890 (1141)
.||+|+||.||+|.+. +..+|+|+...+........ ..+ .....++..+....||||+++++++...+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-------- 70 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGE-TLA-LNERIMLSLVSTGDCPFIVCMSYAFHTPD-------- 70 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhH-HHH-HHHHHHHHHHHhCCCCcEeeeeeeeecCC--------
Confidence 4899999999999874 56788887543221111111 111 00012234445567999999999988654
Q ss_pred CccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCC
Q 001143 891 PEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADG 970 (1141)
Q Consensus 891 ~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~ 970 (1141)
..++||||++|++|..++.. ...+++..++.|+.|++.||.|||+++|+||||||+||+++.+
T Consensus 71 ------~~~~v~e~~~g~~L~~~l~~-----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~------ 133 (278)
T cd05606 71 ------KLSFILDLMNGGDLHYHLSQ-----HGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEH------ 133 (278)
T ss_pred ------EEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCC------
Confidence 34999999999999998865 3469999999999999999999999999999999999999877
Q ss_pred CCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 001143 971 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYM 1050 (1141)
Q Consensus 971 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~ 1050 (1141)
+.++|+|||++....... .....|+..|+|||++.+ ...++.++||||+||++|+|++|+.||.
T Consensus 134 -~~~kl~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~s~G~~l~~l~~g~~p~~ 197 (278)
T cd05606 134 -GHVRISDLGLACDFSKKK------------PHASVGTHGYMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFR 197 (278)
T ss_pred -CCEEEccCcCccccCccC------------CcCcCCCcCCcCcHHhcC---CCCCCcccchHhHHHHHHHHHhCCCCCC
Confidence 789999999986543211 113468999999999874 2357889999999999999999999997
Q ss_pred CCCH---HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-----CH
Q 001143 1051 GLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-----TA 1122 (1141)
Q Consensus 1051 ~~~~---~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-----Sa 1122 (1141)
.... ......+. ...+.++ ...+..+.+++.+||..+|.+|| ++
T Consensus 198 ~~~~~~~~~~~~~~~-~~~~~~~---------------------------~~~s~~~~~li~~~l~~~p~~R~~~~~~~~ 249 (278)
T cd05606 198 QHKTKDKHEIDRMTL-TMAVELP---------------------------DSFSPELRSLLEGLLQRDVNRRLGCLGRGA 249 (278)
T ss_pred CCCccchHHHHHHhh-ccCCCCC---------------------------CcCCHHHHHHHHHHhhcCHHhccCCCCCCH
Confidence 6422 11111111 1111110 13456799999999999999999 99
Q ss_pred HHHHHHHHhhcC
Q 001143 1123 GDLYEMFVARTS 1134 (1141)
Q Consensus 1123 ~ElL~~L~~~~~ 1134 (1141)
.++++|+|++..
T Consensus 250 ~~ll~~~~~~~~ 261 (278)
T cd05606 250 QEVKEHPFFRSL 261 (278)
T ss_pred HHHHhCccccCC
Confidence 999999999754
No 347
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=3.9e-32 Score=306.75 Aligned_cols=257 Identities=26% Similarity=0.422 Sum_probs=199.0
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|....+||+|+||.||++... +..+++|..... ...... .+.+|+.+++.++||||+++++++...+
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~----~~~~~~----~~~~e~~~l~~l~h~~iv~~~~~~~~~~--- 90 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR----KQQRRE----LLFNEVVIMRDYQHENVVEMYNSYLVGD--- 90 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc----chhHHH----HHHHHHHHHHhcCCcchhheeeEEEeCC---
Confidence 344578999999999999884 456666654221 112222 3478999999999999999999988654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
+.++||||+++++|.+++.. ..+++..+..++.|++.||+|||++|++||||+|+||+++.+
T Consensus 91 -----------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~- 152 (292)
T cd06657 91 -----------ELWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHD- 152 (292)
T ss_pred -----------EEEEEEecCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC-
Confidence 34999999999999998754 358999999999999999999999999999999999999887
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.++|+|||.+........ ......|++.|+|||.+.+ ..++.++||||||+++|+|++|
T Consensus 153 ------~~~~l~dfg~~~~~~~~~~----------~~~~~~~~~~y~~pE~~~~----~~~~~~~Dv~slGvil~el~tg 212 (292)
T cd06657 153 ------GRVKLSDFGFCAQVSKEVP----------RRKSLVGTPYWMAPELISR----LPYGPEVDIWSLGIMVIEMVDG 212 (292)
T ss_pred ------CCEEEcccccceecccccc----------cccccccCccccCHHHhcC----CCCCchhhHHHHHHHHHHHHhC
Confidence 7899999998865432110 1123458899999999865 4567899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
+.||.+....+....+.....+.+.. ....+..+.+++.+||+.||.+||++.++
T Consensus 213 ~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~~P~~R~~~~~l 267 (292)
T cd06657 213 EPPYFNEPPLKAMKMIRDNLPPKLKN-------------------------LHKVSPSLKGFLDRLLVRDPAQRATAAEL 267 (292)
T ss_pred CCCCCCCCHHHHHHHHHhhCCcccCC-------------------------cccCCHHHHHHHHHHHhCCcccCcCHHHH
Confidence 99998766655544443322211110 01345568899999999999999999999
Q ss_pred HHHHHhhcCCCCC
Q 001143 1126 YEMFVARTSSSIS 1138 (1141)
Q Consensus 1126 L~~L~~~~~s~~s 1138 (1141)
++|+|+......+
T Consensus 268 l~~~~~~~~~~~~ 280 (292)
T cd06657 268 LKHPFLAKAGPPS 280 (292)
T ss_pred hcChHHhccCCCc
Confidence 9999997654433
No 348
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6e-33 Score=298.31 Aligned_cols=271 Identities=24% Similarity=0.349 Sum_probs=210.2
Q ss_pred CCC-ceE-eeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001143 805 FPS-LSS-CDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~-y~i-~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~ 879 (1141)
+.+ |++ .+.||+|+|+.|--+.. .+..+|||| +++. .+.. . .++.+|++++.+.+ |+||++++++|+
T Consensus 75 F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKi--idKq-~gHs-R----~RvfREVe~f~~Cqgh~nilqLiefFE 146 (463)
T KOG0607|consen 75 FEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKI--IDKQ-PGHS-R----SRVFREVETFYQCQGHKNILQLIEFFE 146 (463)
T ss_pred HHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhh--hhcC-CchH-H----HHHHHHHHHHHHhcCCccHHHHHHHhc
Confidence 444 443 46799999999998875 677889998 4443 2222 2 23469999999996 999999999999
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
++..+ |||||-+.||+|..+|++ .+.+++.++.+++++|+.||.|||.+||.||||||+||
T Consensus 147 dd~~F--------------YLVfEKm~GGplLshI~~-----~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENi 207 (463)
T KOG0607|consen 147 DDTRF--------------YLVFEKMRGGPLLSHIQK-----RKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENI 207 (463)
T ss_pred ccceE--------------EEEEecccCchHHHHHHH-----hhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccce
Confidence 87755 999999999999999987 45799999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGvi 1038 (1141)
|-...+ ...-||||||.+..-+.....- +....+..-+.+|+..|||||+..--. ....|+.+.|.||||||
T Consensus 208 LC~~pn----~vsPvKiCDfDLgSg~k~~~~~---spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvI 280 (463)
T KOG0607|consen 208 LCESPN----KVSPVKICDFDLGSGIKLNNDC---SPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVI 280 (463)
T ss_pred eecCCC----CcCceeeeccccccccccCCCC---CCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHH
Confidence 986542 2356999999887544332211 111223334567999999999864321 23568999999999999
Q ss_pred HHHHHhCCCCCCCCC---------------HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHH
Q 001143 1039 LLELLTLQVPYMGLS---------------ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1103 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~---------------~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1141)
+|-|++|.+||.+.- ...+++.|+.+...-...++ ..++.+
T Consensus 281 lYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdW------------------------ahIS~e 336 (463)
T KOG0607|consen 281 LYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDW------------------------AHISSE 336 (463)
T ss_pred HHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhh------------------------HHhhHH
Confidence 999999999997632 23456777766653322221 267888
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1104 LVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1104 L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
..+++..+|..|+.+|.++.++++|||+..
T Consensus 337 akdlisnLlvrda~~rlsa~~vlnhPw~~~ 366 (463)
T KOG0607|consen 337 AKDLISNLLVRDAKQRLSAAQVLNHPWVQR 366 (463)
T ss_pred HHHHHHHHHhccHHhhhhhhhccCCccccc
Confidence 999999999999999999999999999874
No 349
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=2.9e-32 Score=312.10 Aligned_cols=289 Identities=19% Similarity=0.219 Sum_probs=207.1
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
+|++.+.||+|++|.||+|++. +..+++|... .........+ .+.+|+.+++.++||||+++++++.....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~--~~~~~~~~~~----~~~~e~~~l~~l~~~~i~~~~~~~~~~~~- 73 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKIS--NVFDDLIDAK----RILREIKLLRHLRHENIIGLLDILRPPSP- 73 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeec--cccccchhhh----hHHHHHHHHHhcCCcchhhhhhhhcccCc-
Confidence 5899999999999999999985 4566776543 2221122222 34789999999999999999999876431
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
......|+||||++ ++|.+++.+ ...+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 74 --------~~~~~~~lv~e~~~-~~l~~~l~~-----~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~ 139 (330)
T cd07834 74 --------EDFNDVYIVTELME-TDLHKVIKS-----PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSN 139 (330)
T ss_pred --------ccccceEEEecchh-hhHHHHHhC-----CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 11235699999997 688888865 2379999999999999999999999999999999999999987
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+......... ........++..|+|||++.+. ..++.++||||||+++|+|++
T Consensus 140 -------~~~~L~dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~~---~~~~~~sDi~slG~il~~l~~ 202 (330)
T cd07834 140 -------CDLKICDFGLARGVDPDEDE-------KGFLTEYVVTRWYRAPELLLSS---SRYTKAIDIWSVGCIFAELLT 202 (330)
T ss_pred -------CCEEEcccCceEeecccccc-------cccccccccccCcCCceeeecc---cCCCcchhHHHHHHHHHHHHc
Confidence 78999999999765442210 0011234578899999998762 267899999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC-ccccccc--cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-HEHEVAQ--SGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|+.||.+.+..+....+...........+...... ....... ..............+..+.+++.+||+.||.+||+
T Consensus 203 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt 282 (330)
T cd07834 203 RKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRIT 282 (330)
T ss_pred CCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCC
Confidence 99999987776665555332221111111100000 0000000 00000001111235678999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001143 1122 AGDLYEMFVART 1133 (1141)
Q Consensus 1122 a~ElL~~L~~~~ 1133 (1141)
+.+++.|+|+..
T Consensus 283 ~~~ll~~~~~~~ 294 (330)
T cd07834 283 ADEALAHPYLAQ 294 (330)
T ss_pred HHHHHhCccHHh
Confidence 999999999974
No 350
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=4.5e-32 Score=302.63 Aligned_cols=277 Identities=24% Similarity=0.268 Sum_probs=197.3
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~~~ 884 (1141)
|++.+.||+|++|+||+|.+. +..+++|..... ........ ..+|+..+++++ ||||+++++++.+.+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~--~~~~~~~~-----~~~e~~~l~~~~~h~~i~~~~~~~~~~~-- 71 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKK--FYSWEECM-----NLREVKSLRKLNEHPNIVKLKEVFREND-- 71 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhh--ccchhHHH-----HHHHHHHHHhccCCCCchhHHHHhhcCC--
Confidence 678999999999999999985 455666654322 11112111 247999999998 999999999987644
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+ +++|.+++... ....+++..+..++.|++.||.|||++|++|+||+|+||+++.+
T Consensus 72 ------------~~~lv~e~~-~~~l~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~ 135 (283)
T cd07830 72 ------------ELYFVFEYM-EGNLYQLMKDR---KGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGP 135 (283)
T ss_pred ------------cEEEEEecC-CCCHHHHHHhc---ccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC
Confidence 349999999 68999988762 22468999999999999999999999999999999999999987
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+....... ......++..|+|||++.. ...++.++|+||||+++++|++
T Consensus 136 -------~~~~l~d~~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~---~~~~~~~~Di~s~G~~l~el~~ 194 (283)
T cd07830 136 -------EVVKIADFGLAREIRSRP-----------PYTDYVSTRWYRAPEILLR---STSYSSPVDIWALGCIMAELYT 194 (283)
T ss_pred -------CCEEEeecccceeccCCC-----------CcCCCCCcccccCceeeec---CcCcCCccchhhHHHHHHHHHh
Confidence 789999999987543311 1113457889999998864 2456789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhh---ccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEAL---GSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|+.||......+....+...........+... ........... ............+..+.+++.+||+.||.+|||
T Consensus 195 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt 273 (283)
T cd07830 195 LRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQF-APTSLHQLIPNASPEAIDLIKDMLRWDPKKRPT 273 (283)
T ss_pred CCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcccccccccc-ccccHHHHcccCCHHHHHHHHHhcccCcccCCC
Confidence 99999876655544443222111111111000 00000000000 000000011123567999999999999999999
Q ss_pred HHHHHHHHHh
Q 001143 1122 AGDLYEMFVA 1131 (1141)
Q Consensus 1122 a~ElL~~L~~ 1131 (1141)
+.|++.|+|+
T Consensus 274 ~~ei~~~~~~ 283 (283)
T cd07830 274 ASQALQHPYF 283 (283)
T ss_pred HHHHhhCCCC
Confidence 9999999885
No 351
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.6e-33 Score=321.16 Aligned_cols=258 Identities=25% Similarity=0.351 Sum_probs=213.0
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
....+..|.+.+.||+|.|+.|.+|++ .+..||+|+ ++++.......+.+ .+|+++|+.++|||||+++.+.
T Consensus 51 ~~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~--idkt~ln~~~~~k~----~rev~imk~l~HPnIvkl~~v~ 124 (596)
T KOG0586|consen 51 DSNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKI--IDKTQLNPSKRQKL----GREVDIMKSLNHPNIVKLFSVI 124 (596)
T ss_pred ccccccceeeeeeeccceeEEEEeeEecCCCceEEEEE--ehhcccChHHHHHH----HHHHHHHHhcCCcceeeeeeee
Confidence 345567799999999999999999998 567777776 55555444433333 6999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
..... +|+||||+.+|.+++++.+ ..++.+..+..++.|+.+|++|||+++|||||||++|
T Consensus 125 ~t~~~--------------lylV~eya~~ge~~~yl~~-----~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eN 185 (596)
T KOG0586|consen 125 ETEAT--------------LYLVMEYASGGELFDYLVK-----HGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAEN 185 (596)
T ss_pred eecce--------------eEEEEEeccCchhHHHHHh-----cccchhhhhhhhhHHHHHHHHHHhhcceeccccchhh
Confidence 87664 4999999999999999987 3457779999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ .++||+|||++..+.... ..+..+|++.|.|||++.+. ...++.+|+||+|++
T Consensus 186 ilL~~~-------mnikIaDfgfS~~~~~~~-----------~lqt~cgsppyAaPEl~~g~---~y~gpe~D~Wslgvv 244 (596)
T KOG0586|consen 186 ILLDEN-------MNIKIADFGFSTFFDYGL-----------MLQTFCGSPPYAAPELFNGK---KYDGPEVDIWSLGVV 244 (596)
T ss_pred cccccc-------cceeeeccccceeecccc-----------cccccCCCCCccChHhhcCc---ccCCcceehhhhhhh
Confidence 999988 789999999998765321 23466799999999999883 355799999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|-|+.|..||.+....++...+..+... ++ ...+.+..++|+++|..+|.+
T Consensus 245 ly~LV~GsLPFDG~~lk~Lr~rvl~gk~r-Ip---------------------------~~ms~dce~lLrk~lvl~Psk 296 (596)
T KOG0586|consen 245 LYALVEGSLPFDGQNLKELRPRVLRGKYR-IP---------------------------FYMSCDCEDLLRKFLVLNPSK 296 (596)
T ss_pred heeeeecccccCCcccccccchheeeeec-cc---------------------------ceeechhHHHHHHhhccCccc
Confidence 99999999999987666655544333221 00 134556889999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001143 1119 RPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~ 1132 (1141)
|++.+++.+|.|.-
T Consensus 297 r~~~dqim~~~W~n 310 (596)
T KOG0586|consen 297 RGPCDQIMKDRWRN 310 (596)
T ss_pred cCCHHHhhhhcccc
Confidence 99999999998864
No 352
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-33 Score=294.31 Aligned_cols=264 Identities=22% Similarity=0.381 Sum_probs=209.6
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEec
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKIS 880 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~ 880 (1141)
..++++.++...||.|+.|.||++++..+...++|+....+.. .++.+. ++..+.++.+-+ .|+||+.+|||..
T Consensus 88 ~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N-kee~kR----ILmDldvv~~s~dcpyIV~c~GyFi~ 162 (391)
T KOG0983|consen 88 QADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN-KEENKR----ILMDLDVVLKSHDCPYIVQCFGYFIT 162 (391)
T ss_pred ccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC-HHHHHH----HHHhhhHHhhccCCCeeeeeeeEEee
Confidence 4567788899999999999999999988666666665555433 333444 378888887765 9999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCe
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENI 959 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NI 959 (1141)
+... ++.||.|. .-++.++++. .+++++..+-++...++.||.||.. +||+|||+||+||
T Consensus 163 n~dV--------------~IcMelMs-~C~ekLlkri----k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNI 223 (391)
T KOG0983|consen 163 NTDV--------------FICMELMS-TCAEKLLKRI----KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI 223 (391)
T ss_pred CchH--------------HHHHHHHH-HHHHHHHHHh----cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccce
Confidence 6544 89999984 5556666552 3579999999999999999999985 6999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|+|+. |++||||||.+-.+.+... .....|-+.|||||.+.- .....|+-++||||||+.+
T Consensus 224 LlDe~-------GniKlCDFGIsGrlvdSkA-----------htrsAGC~~YMaPERidp-~~~~kYDiRaDVWSlGITl 284 (391)
T KOG0983|consen 224 LLDER-------GNIKLCDFGISGRLVDSKA-----------HTRSAGCAAYMAPERIDP-PDKPKYDIRADVWSLGITL 284 (391)
T ss_pred EEccC-------CCEEeecccccceeecccc-----------cccccCCccccCccccCC-CCCCccchhhhhhhhccch
Confidence 99988 8999999999977654321 123468899999999864 2346789999999999999
Q ss_pred HHHHhCCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+||.||+.||.+. .+.++...|....+|.++... ..++.+++|+..||..|+.+
T Consensus 285 veLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~-------------------------gFSp~F~~fv~~CL~kd~r~ 339 (391)
T KOG0983|consen 285 VELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHM-------------------------GFSPDFQSFVKDCLTKDHRK 339 (391)
T ss_pred hhhhcccCCCCCCCccHHHHHHHHhcCCCCCCccc-------------------------CcCHHHHHHHHHHhhcCccc
Confidence 9999999999873 445677777665555443211 35677999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001143 1119 RPTAGDLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~ 1133 (1141)
||...++++|+|...
T Consensus 340 RP~Y~~Ll~h~Fi~~ 354 (391)
T KOG0983|consen 340 RPKYNKLLEHPFIKR 354 (391)
T ss_pred CcchHHHhcCcceee
Confidence 999999999988653
No 353
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-33 Score=301.92 Aligned_cols=261 Identities=23% Similarity=0.357 Sum_probs=215.2
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
.-.+.++|.+.++||+|.||.|-+++- .+..+|+||.+.++.... ++...- +.|-++|+..+||.+..+--.|
T Consensus 163 ~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiak-dEVAHT----lTE~RVL~~~~HPFLt~LKYsF 237 (516)
T KOG0690|consen 163 NKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAK-DEVAHT----LTENRVLQNCRHPFLTSLKYSF 237 (516)
T ss_pred ceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeeh-HHhhhh----hhHHHHHHhccCcHHHHhhhhh
Confidence 456789999999999999999999986 467789998765554333 333332 6899999999999999887777
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
...+ ++|+||||..||.|.-++.+ ...+++..++.+...|+.||.|||+++||+||||.+|
T Consensus 238 Qt~d--------------rlCFVMeyanGGeLf~HLsr-----er~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLEN 298 (516)
T KOG0690|consen 238 QTQD--------------RLCFVMEYANGGELFFHLSR-----ERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLEN 298 (516)
T ss_pred ccCc--------------eEEEEEEEccCceEeeehhh-----hhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhh
Confidence 7655 45999999999999998876 4579999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
.|+|.+ |++||.|||+|+.--.... ....++|||.|.|||++.. ..|+.++|+|.+||+
T Consensus 299 LlLDkD-------GHIKitDFGLCKE~I~~g~----------t~kTFCGTPEYLAPEVleD----nDYgraVDWWG~GVV 357 (516)
T KOG0690|consen 299 LLLDKD-------GHIKITDFGLCKEEIKYGD----------TTKTFCGTPEYLAPEVLED----NDYGRAVDWWGVGVV 357 (516)
T ss_pred heeccC-------CceEeeecccchhcccccc----------eeccccCChhhcCchhhcc----ccccceeehhhhhHH
Confidence 999999 9999999999975322211 2246789999999999987 789999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|||+.|+.||...+...+++.|..... .++ ...+++.+.|+..+|..||.+
T Consensus 358 MYEMmCGRLPFyn~dh~kLFeLIl~ed~-kFP---------------------------r~ls~eAktLLsGLL~kdP~k 409 (516)
T KOG0690|consen 358 MYEMMCGRLPFYNKDHEKLFELILMEDL-KFP---------------------------RTLSPEAKTLLSGLLKKDPKK 409 (516)
T ss_pred HHHHHhccCcccccchhHHHHHHHhhhc-cCC---------------------------ccCCHHHHHHHHHHhhcChHh
Confidence 9999999999998777777777643221 111 145567899999999999999
Q ss_pred CC-----CHHHHHHHHHhhcC
Q 001143 1119 RP-----TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RP-----Sa~ElL~~L~~~~~ 1134 (1141)
|. .+.||.+|.+|..-
T Consensus 410 RLGgGpdDakEi~~h~FF~~v 430 (516)
T KOG0690|consen 410 RLGGGPDDAKEIMRHRFFASV 430 (516)
T ss_pred hcCCCchhHHHHHhhhhhccC
Confidence 94 58999999998754
No 354
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=4.8e-32 Score=313.05 Aligned_cols=286 Identities=20% Similarity=0.219 Sum_probs=204.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||+|++|.||+|++. +..+++|+.... .......+ .+.+|+.++++++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~--~~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (343)
T cd07851 14 PDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRP--FQSAIHAK----RTYRELRLLKHMDHENVIGLLDVFTPAS 87 (343)
T ss_pred cCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccc--cchhhHHH----HHHHHHHHHHhccCCCHHHHHHHhhccc
Confidence 457999999999999999999985 456777764321 11112222 2368999999999999999999876543
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ......++||||+ +++|.+++.. ..+++..+..++.||+.||+|||+.||+||||||+||+++
T Consensus 88 ~~--------~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~ 152 (343)
T cd07851 88 SL--------EDFQDVYLVTHLM-GADLNNIVKC------QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN 152 (343)
T ss_pred cc--------cccccEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC
Confidence 21 1223469999999 5799998864 3699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+...... .....++..|+|||.+.+ ...++.++|||||||++|+|
T Consensus 153 ~~-------~~~kL~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~---~~~~~~~~DvwslGv~l~el 209 (343)
T cd07851 153 ED-------CELKILDFGLARHTDDE-------------MTGYVATRWYRAPEIMLN---WMHYNQTVDIWSVGCIMAEL 209 (343)
T ss_pred CC-------CCEEEcccccccccccc-------------ccCCcccccccCHHHHhC---CCCCCchHhHHHHHHHHHHH
Confidence 87 78999999998754321 113357889999999864 13567899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCC---CchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE---KPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
++|+.||.+....+....+........+.............+........ ........+..+.+++.+||..||.+|
T Consensus 210 ltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~R 289 (343)
T cd07851 210 LTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKR 289 (343)
T ss_pred HhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhC
Confidence 99999998766665555543322222111111110000000000000000 001111346789999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
||+.+|++|+|+...
T Consensus 290 pt~~ell~h~~~~~~ 304 (343)
T cd07851 290 ITAAEALAHPYLAEY 304 (343)
T ss_pred CCHHHHhcCCCcccc
Confidence 999999999999643
No 355
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.6e-32 Score=303.79 Aligned_cols=260 Identities=22% Similarity=0.257 Sum_probs=196.6
Q ss_pred CceEeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 880 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~-----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~ 880 (1141)
+|++.+.||+|+||.||+|.+ .+..+|+|+.+....... ......+.+|+.++.++ +||||+++++.+..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~ 76 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQK----AKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT 76 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhc----chHHHHHHHHHHHHHhcccCCChhceeeEeec
Confidence 488999999999999999986 456788887643211111 11122347899999999 59999999998876
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
+. ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.|++||||+|+|||
T Consensus 77 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil 137 (290)
T cd05613 77 DT--------------KLHLILDYINGGELFTHLSQ-----RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENIL 137 (290)
T ss_pred CC--------------eEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeE
Confidence 54 34899999999999999875 246889999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||++......... ......|+..|+|||.+... ...++.++||||||+++|
T Consensus 138 ~~~~-------~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~--~~~~~~~~Dv~slG~~l~ 199 (290)
T cd05613 138 LDSN-------GHVVLTDFGLSKEFHEDEVE---------RAYSFCGTIEYMAPDIVRGG--DGGHDKAVDWWSMGVLMY 199 (290)
T ss_pred ECCC-------CCEEEeeCccceeccccccc---------ccccccCCcccCChhhccCC--CCCCCccccHHHHHHHHH
Confidence 9887 78999999998754321110 11134588999999998642 134578999999999999
Q ss_pred HHHhCCCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1041 ELLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+|++|..||..... .++...+..... ..+ ...+..+.+++.+||..||
T Consensus 200 ~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~---------------------------~~~~~~~~~ll~~~l~~~p 251 (290)
T cd05613 200 ELLTGASPFTVDGEKNSQAEISRRILKSEP-PYP---------------------------QEMSALAKDIIQRLLMKDP 251 (290)
T ss_pred HHhcCCCCCCcCCccccHHHHHHHhhccCC-CCC---------------------------ccCCHHHHHHHHHHhcCCH
Confidence 99999999964222 122222211111 000 1345568999999999999
Q ss_pred CCCC-----CHHHHHHHHHhhcCC
Q 001143 1117 TERP-----TAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1117 ~~RP-----Sa~ElL~~L~~~~~s 1135 (1141)
++|| ++.+++.|+|+....
T Consensus 252 ~~R~~~~~~~~~~l~~~~~~~~~~ 275 (290)
T cd05613 252 KKRLGCGPSDADEIKKHPFFQKIN 275 (290)
T ss_pred HHhcCCCCCCHHHHHcCcccccCC
Confidence 9997 899999999986543
No 356
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=6.9e-32 Score=304.44 Aligned_cols=264 Identities=23% Similarity=0.358 Sum_probs=198.3
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~ 878 (1141)
...+++|++.+.||+|+||.||+|.+. +..+++|+.... .. ......+ ..|+.++.+.. ||||+++++++
T Consensus 11 ~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~--~~-~~~~~~~----~~e~~~~~~~~~~~~i~~~~~~~ 83 (296)
T cd06618 11 PADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRT--GN-KEENKRI----LMDLDVVLKSHDCPYIVKCYGYF 83 (296)
T ss_pred cCCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEecc--CC-hHHHHHH----HHHHHHHHhccCCCchHhhheee
Confidence 456788999999999999999999986 667788775422 11 1222222 56777777775 99999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSE 957 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~ 957 (1141)
.+... .++||||+. ++|.+++... ...+++..+..++.||+.||.|||+ .||+||||+|+
T Consensus 84 ~~~~~--------------~~~v~e~~~-~~l~~l~~~~----~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~ 144 (296)
T cd06618 84 ITDSD--------------VFICMELMS-TCLDKLLKRI----QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPS 144 (296)
T ss_pred ecCCe--------------EEEEeeccC-cCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHH
Confidence 86543 499999985 6888877652 2368999999999999999999997 59999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
||+++.+ +.+||+|||++..+..... .....++..|+|||.+.+......++.++||||||+
T Consensus 145 nill~~~-------~~~kL~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~ 206 (296)
T cd06618 145 NILLDAS-------GNVKLCDFGISGRLVDSKA-----------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGI 206 (296)
T ss_pred HEEEcCC-------CCEEECccccchhccCCCc-----------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHH
Confidence 9999877 7899999999865432111 112247888999999875322244788999999999
Q ss_pred HHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|+|++|+.||..... .+....+.....+..+. ....+.++.+++.+||..||
T Consensus 207 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~~p 261 (296)
T cd06618 207 SLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPP-------------------------NEGFSPDFCSFVDLCLTKDH 261 (296)
T ss_pred HHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCC-------------------------CCCCCHHHHHHHHHHccCCh
Confidence 99999999999975322 22333332222111110 00345679999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001143 1117 TERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~ 1134 (1141)
.+||++.++++|+|+..-
T Consensus 262 ~~Rp~~~~il~~~~~~~~ 279 (296)
T cd06618 262 RKRPKYRELLQHPFIRRY 279 (296)
T ss_pred hhCCCHHHHhcChhhhcc
Confidence 999999999999998753
No 357
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=7.3e-32 Score=300.50 Aligned_cols=272 Identities=24% Similarity=0.381 Sum_probs=194.3
Q ss_pred CCceEeeeecccCceEEEEEEEC------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
..|++.+.||+|+||.||+|.+. +..+|+|+.... ... ...+. +.+|+.+++++.||||+++++++.
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~--~~~-~~~~~----~~~ei~~l~~l~~~~i~~~~~~~~ 76 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHS--GEE-QHRSD----FEREIEILRTLDHENIVKYKGVCE 76 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccc--cch-HHHHH----HHHHHHHHHhCCCCChheEEeeee
Confidence 45788899999999999999864 456777775422 111 12333 489999999999999999999886
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.... ...++||||+++++|.+++... ...+++..+..++.||+.||+|||++||+||||||+||
T Consensus 77 ~~~~------------~~~~lv~e~~~~~~l~~~l~~~----~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni 140 (284)
T cd05038 77 KPGG------------RSLRLIMEYLPSGSLRDYLQRH----RDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNI 140 (284)
T ss_pred cCCC------------CceEEEEecCCCCCHHHHHHhC----ccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhE
Confidence 5321 2459999999999999999762 22599999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.++|+|||.+.......... .......++..|+|||.+.+ ..++.++||||||+++
T Consensus 141 l~~~~-------~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~~Pe~~~~----~~~~~~~Di~slG~~l 202 (284)
T cd05038 141 LVESE-------DLVKISDFGLAKVLPEDKDYY-------YVKEPGESPIFWYAPECLRT----SKFSSASDVWSFGVTL 202 (284)
T ss_pred EEcCC-------CCEEEcccccccccccCCcce-------eccCCCCCcccccCcHHHcc----CCCCcccchHHHhhhh
Confidence 99887 789999999997654221110 00111235567999999876 4678899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+|++|..|+........ ........ .......... ........ ...++.++.+++.+||+.+|.+
T Consensus 203 ~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~~~~~~~~---~~~~~~~~~~li~~cl~~~p~~ 269 (284)
T cd05038 203 YELFTYGDPSQSPPAEFL-RMIGIAQGQMIVTRLLELL---------KEGERLPR---PPSCPDEVYDLMKLCWEAEPQD 269 (284)
T ss_pred heeeccCCCcccccchhc-cccccccccccHHHHHHHH---------HcCCcCCC---CccCCHHHHHHHHHHhccChhh
Confidence 999999999865322110 00000000 0000000000 00000000 1134567999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001143 1119 RPTAGDLYEMFVA 1131 (1141)
Q Consensus 1119 RPSa~ElL~~L~~ 1131 (1141)
|||+.||++.+..
T Consensus 270 Rpt~~ei~~~l~~ 282 (284)
T cd05038 270 RPSFADLILIVDR 282 (284)
T ss_pred CCCHHHHHHHHhh
Confidence 9999999998764
No 358
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=1.6e-31 Score=302.04 Aligned_cols=273 Identities=18% Similarity=0.211 Sum_probs=185.9
Q ss_pred CCceEeeeecccCceEEEEEEECCc-----cEEEEEEecccCCCChHH--HHH-hHHhHHHHHHHHhhCCCCCccceeee
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSA-----DAAAKVRTLKVCGSSADE--IRN-FEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~-----~vAvKI~~l~~~~~~~~~--~~~-~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
.+|++.++||+|+||.||+|.+.+. .+++|+..........+. ... .......+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 4799999999999999999998544 455665433221110000 000 00111234445566789999999987
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+..... .....+++||++. .++.+.+.. ....++..+..|+.||+.||+|||+++|+||||||+
T Consensus 92 ~~~~~~----------~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~ 155 (294)
T PHA02882 92 GSFKRC----------RMYYRFILLEKLV-ENTKEIFKR-----IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPE 155 (294)
T ss_pred eeEecC----------CceEEEEEEehhc-cCHHHHHHh-----hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHH
Confidence 654321 1234578999885 577777654 123678889999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||++.+ +.++|+|||+|+.+......... .........||+.|+|||++.+ ..++.++|||||||
T Consensus 156 Nill~~~-------~~~~l~DFGla~~~~~~~~~~~~---~~~~~~~~~gt~~y~ape~~~~----~~~~~~~DiwSlG~ 221 (294)
T PHA02882 156 NIMVDGN-------NRGYIIDYGIASHFIIHGKHIEY---SKEQKDLHRGTLYYAGLDAHNG----ACVTRRGDLESLGY 221 (294)
T ss_pred HEEEcCC-------CcEEEEEcCCceeeccCCccccc---ccccccccCCCccccCHHHhCC----CCCCcHHHHHHHHH
Confidence 9999876 78999999999765432211100 0111223469999999999876 56889999999999
Q ss_pred HHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|||++|+.||.+... ..............+.. .. .. ....++.+.+++..|+..+|
T Consensus 222 ~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~---------------~~--~~----~~~~~~~~~~~~~~~~~~~~ 280 (294)
T PHA02882 222 CMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHE---------------GK--IK----IKNANKFIYDFIECVTKLSY 280 (294)
T ss_pred HHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhh---------------hh--hc----cCCCCHHHHHHHHHHHhCCC
Confidence 99999999999986532 22221111000000000 00 00 01345779999999999999
Q ss_pred CCCCCHHHHHHHH
Q 001143 1117 TERPTAGDLYEMF 1129 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L 1129 (1141)
++||++.++++.+
T Consensus 281 ~~rp~~~~l~~~~ 293 (294)
T PHA02882 281 EEKPDYDALIKIF 293 (294)
T ss_pred CCCCCHHHHHHhh
Confidence 9999999998754
No 359
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1e-31 Score=299.05 Aligned_cols=279 Identities=23% Similarity=0.265 Sum_probs=201.0
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|++.+.||+|++|.||+|++. +..+++|+..... ......+ .+..|+.++++++||||+++++++....
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~--~~~~~~~----~~~~e~~~l~~~~~~~i~~~~~~~~~~~--- 71 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN--EEEGIPS----TALREISLLKELKHPNIVKLLDVIHTER--- 71 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc--ccccccH----HHHHHHHHHHhcCCCCHHHHHhhhhcCC---
Confidence 677899999999999999985 5678888765332 1111122 2368999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
..++||||++ ++|.+++... ...+++..+..++.|++.||.|||++||+||||+|+||+++.+
T Consensus 72 -----------~~~~v~e~~~-~~l~~~i~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~- 134 (282)
T cd07829 72 -----------KLYLVFEYCD-MDLKKYLDKR----PGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRD- 134 (282)
T ss_pred -----------ceEEEecCcC-cCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCC-
Confidence 3499999997 6999999862 1369999999999999999999999999999999999999887
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.++|+|||.+........ ......++..|+|||.+.+ ...++.++|||||||++|+|++|
T Consensus 135 ------~~~~l~d~g~~~~~~~~~~----------~~~~~~~~~~~~aPE~~~~---~~~~~~~~Dv~slG~~l~~l~~~ 195 (282)
T cd07829 135 ------GVLKLADFGLARAFGIPLR----------TYTHEVVTLWYRAPEILLG---SKHYSTAVDIWSVGCIFAEMITG 195 (282)
T ss_pred ------CCEEEecCCcccccCCCcc----------ccCccccCcCcCChHHhcC---CcCCCccccHHHHHHHHHHHHhC
Confidence 7899999999876533211 1112345778999999875 23678899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCc-cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH-EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
..||......+....+...........+....... ....................+..+.+++.+||..||++||++.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ 275 (282)
T cd07829 196 KPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKE 275 (282)
T ss_pred CCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHH
Confidence 99998766655544442222111111111111000 00000000000000111133677999999999999999999999
Q ss_pred HHHHHHh
Q 001143 1125 LYEMFVA 1131 (1141)
Q Consensus 1125 lL~~L~~ 1131 (1141)
++.|+|+
T Consensus 276 ~l~~p~~ 282 (282)
T cd07829 276 ALKHPYF 282 (282)
T ss_pred HhhCcCC
Confidence 9999986
No 360
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=1.6e-31 Score=304.56 Aligned_cols=255 Identities=27% Similarity=0.411 Sum_probs=196.1
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|...++||+|+||+||+|++. +..+++|+..... .......+. +.+|+.+++.++|||++++++++.+..
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~--- 94 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSG-KQTNEKWQD----IIKEVKFLQQLKHPNTIEYKGCYLKEH--- 94 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccc-cCchHHHHH----HHHHHHHHHhCCCCCCccEEEEEEeCC---
Confidence 677788999999999999974 5556666543221 112222233 378999999999999999999988654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
..|+||||+. ++|.+++.. ...++++..+..++.||+.||.|||++||+||||+|+||+++.+
T Consensus 95 -----------~~~lv~e~~~-~~l~~~l~~----~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~- 157 (313)
T cd06633 95 -----------TAWLVMEYCL-GSASDLLEV----HKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEP- 157 (313)
T ss_pred -----------EEEEEEecCC-CCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCC-
Confidence 3499999996 688887764 13468999999999999999999999999999999999999877
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.+||+|||.+..... .....|+..|+|||++.... ...++.++|||||||++|+|++|
T Consensus 158 ------~~~kL~dfg~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~-~~~~~~~sDv~slGvil~el~~g 216 (313)
T cd06633 158 ------GQVKLADFGSASKSSP--------------ANSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAER 216 (313)
T ss_pred ------CCEEEeecCCCcccCC--------------CCCccccccccChhhccccC-CCCCCchhhHHHHHHHHHHHHhC
Confidence 7899999998753211 11345888999999985321 24577899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
..||...........+.....+.... ...+..+.+++.+||+.+|.+||++.++
T Consensus 217 ~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~~P~~Rp~~~~~ 270 (313)
T cd06633 217 KPPLFNMNAMSALYHIAQNDSPTLQS--------------------------NEWTDSFRGFVDYCLQKIPQERPASAEL 270 (313)
T ss_pred CCCCCCCChHHHHHHHHhcCCCCCCc--------------------------cccCHHHHHHHHHHccCChhhCcCHHHH
Confidence 99998766555444443322221110 1334568999999999999999999999
Q ss_pred HHHHHhhcC
Q 001143 1126 YEMFVARTS 1134 (1141)
Q Consensus 1126 L~~L~~~~~ 1134 (1141)
+.|+|+...
T Consensus 271 l~~~~~~~~ 279 (313)
T cd06633 271 LRHDFVRRD 279 (313)
T ss_pred hcCcccCCC
Confidence 999999754
No 361
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.98 E-value=1.8e-32 Score=273.99 Aligned_cols=284 Identities=20% Similarity=0.256 Sum_probs=209.0
Q ss_pred CCceEeeeecccCceEEEEEEECCcc--EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSAD--AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~--vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..|.-.++||+|+||+||+|+...+. ||+|-.+++.... ......++|+-+++.++|.|||++++....+..
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrldddde------gvpssalreicllkelkhknivrl~dvlhsdkk 75 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDE------GVPSSALREICLLKELKHKNIVRLHDVLHSDKK 75 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCC------CCcHHHHHHHHHHHHhhhcceeehhhhhccCce
Confidence 35777899999999999999976554 5555554443222 223344799999999999999999999876654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+-+|+|||. .+|..+... -.+.++.+.++.++.|+++||.|+|++++.||||||.|.||+.
T Consensus 76 --------------ltlvfe~cd-qdlkkyfds----lng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ 136 (292)
T KOG0662|consen 76 --------------LTLVFEFCD-QDLKKYFDS----LNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINR 136 (292)
T ss_pred --------------eEEeHHHhh-HHHHHHHHh----cCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEecc
Confidence 489999996 677776654 3457999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ |.+|++|||+|+.+..+..-. ...+-|.+|++|.++.+ ...|+...|+||.||++.|+.
T Consensus 137 n-------gelkladfglarafgipvrcy----------saevvtlwyrppdvlfg---akly~tsidmwsagcifaela 196 (292)
T KOG0662|consen 137 N-------GELKLADFGLARAFGIPVRCY----------SAEVVTLWYRPPDVLFG---AKLYSTSIDMWSAGCIFAELA 196 (292)
T ss_pred C-------CcEEecccchhhhcCCceEee----------eceeeeeeccCcceeee---eehhccchHhhhcchHHHHHh
Confidence 8 899999999998776543211 12357999999999998 457899999999999999998
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcc---CccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGS---CHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
. |.+.|.+.+..+....|.+....+..+.++.... ............++ ...+.....-+++++++|.-+|.+|
T Consensus 197 nagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattsws--qivp~lns~grdllqkll~cnp~qr 274 (292)
T KOG0662|consen 197 NAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWS--QIVPKLNSTGRDLLQKLLKCNPAQR 274 (292)
T ss_pred hcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHH--HHhhhhcchhHHHHHHHhccCcccc
Confidence 7 7777888777776666643322222222221110 00000000011110 1112333446899999999999999
Q ss_pred CCHHHHHHHHHhhcCCC
Q 001143 1120 PTAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~s~ 1136 (1141)
.++++.++|++|...++
T Consensus 275 isaeaalqhpyf~d~s~ 291 (292)
T KOG0662|consen 275 ISAEAALQHPYFSDFSP 291 (292)
T ss_pred cCHHHHhcCccccccCC
Confidence 99999999999976543
No 362
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.98 E-value=8.4e-32 Score=299.83 Aligned_cols=245 Identities=21% Similarity=0.263 Sum_probs=184.1
Q ss_pred CCceEeeee--cccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001143 806 PSLSSCDEA--GKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 880 (1141)
Q Consensus 806 ~~y~i~~~L--G~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~ 880 (1141)
+.|++.+.+ |+|+||.||++... +..+++|+..... ... .|+.....+ +||||+++++.+..
T Consensus 14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~--~~~-----------~e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKN--FNA-----------IEPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhh--cch-----------hhHHHHHHhhcCCCEEEEEEEEec
Confidence 345666665 99999999999874 4566777653221 111 122222222 69999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.|++||||||+||+
T Consensus 81 ~~--------------~~~iv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil 141 (267)
T PHA03390 81 LK--------------GHVLIMDYIKDGDLFDLLKK-----EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVL 141 (267)
T ss_pred CC--------------eeEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEE
Confidence 55 34999999999999999976 237999999999999999999999999999999999999
Q ss_pred eecccccCCCCC-eEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 961 IDLERKKADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 961 ld~~~~~~~~~~-~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
++.+ + .++|+|||.+...... ....++..|+|||++.+ ..++.++||||||+++
T Consensus 142 ~~~~-------~~~~~l~dfg~~~~~~~~--------------~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~il 196 (267)
T PHA03390 142 YDRA-------KDRIYLCDYGLCKIIGTP--------------SCYDGTLDYFSPEKIKG----HNYDVSFDWWAVGVLT 196 (267)
T ss_pred EeCC-------CCeEEEecCccceecCCC--------------ccCCCCCcccChhhhcC----CCCCchhhHHHHHHHH
Confidence 9887 4 8999999998654321 12357899999999876 4578899999999999
Q ss_pred HHHHhCCCCCCCCCHHHH-HHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLTLQVPYMGLSELEI-HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el-~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+|++|+.||........ ...+........ ......+..+.++|.+||+.||.+
T Consensus 197 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~li~~~l~~~p~~ 251 (267)
T PHA03390 197 YELLTGKHPFKEDEDEELDLESLLKRQQKKL-------------------------PFIKNVSKNANDFVQSMLKYNINY 251 (267)
T ss_pred HHHHHCCCCCCCCCcchhhHHHHHHhhcccC-------------------------CcccccCHHHHHHHHHHhccChhh
Confidence 999999999975433221 111111000000 000145667999999999999999
Q ss_pred CCC-HHHHHHHHHhh
Q 001143 1119 RPT-AGDLYEMFVAR 1132 (1141)
Q Consensus 1119 RPS-a~ElL~~L~~~ 1132 (1141)
||+ ++|+++|+|+.
T Consensus 252 R~~~~~~~l~h~~~~ 266 (267)
T PHA03390 252 RLTNYNEIIKHPFLK 266 (267)
T ss_pred CCchHHHHhcCCccc
Confidence 996 69999999985
No 363
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.98 E-value=2.2e-31 Score=302.70 Aligned_cols=256 Identities=27% Similarity=0.403 Sum_probs=196.8
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.|+..+.||+|+||.||+|++. +..+++|....... ........ +.+|+.+++.++|||++++++++....
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~-- 88 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEKWQD----IIKEVRFLQKLRHPNTIQYRGCYLREH-- 88 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccc-cChHHHHH----HHHHHHHHHhCCCCCcccEEEEEEcCC--
Confidence 4788899999999999999984 45567776432211 11222223 378999999999999999999987654
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+. ++|.+++.. ....+++..+..++.|++.||.|||+++++||||||+||+++.+
T Consensus 89 ------------~~~lv~e~~~-~~l~~~~~~----~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~ 151 (308)
T cd06634 89 ------------TAWLVMEYCL-GSASDLLEV----HKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEP 151 (308)
T ss_pred ------------eeEEEEEccC-CCHHHHHHH----cCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCC
Confidence 3499999997 688887754 12458999999999999999999999999999999999999877
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+...... ....+++.|+|||.+.+.. ...++.++|||||||++|+|++
T Consensus 152 -------~~~kl~dfg~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~el~~ 209 (308)
T cd06634 152 -------GLVKLGDFGSASIMAPA--------------NXFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAE 209 (308)
T ss_pred -------CcEEECCcccceeecCc--------------ccccCCccccCHHHHhhcc-cCCCCcccchHHHHHHHHHHHc
Confidence 78999999988654321 1235788999999985421 2346789999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1045 LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
|+.||......+....+.....+... ....+..+.++|.+||..+|.+||++.+
T Consensus 210 g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~li~~cl~~~P~~Rp~~~~ 263 (308)
T cd06634 210 RKPPLFNMNAMSALYHIAQNESPALQ--------------------------SGHWSEYFRNFVDSCLQKIPQDRPTSEV 263 (308)
T ss_pred CCCCCccccHHHHHHHHhhcCCCCcC--------------------------cccccHHHHHHHHHHhhCCcccCCCHHH
Confidence 99999765554444433332222111 0134566899999999999999999999
Q ss_pred HHHHHHhhcC
Q 001143 1125 LYEMFVARTS 1134 (1141)
Q Consensus 1125 lL~~L~~~~~ 1134 (1141)
+++|+|+...
T Consensus 264 ll~~~~~~~~ 273 (308)
T cd06634 264 LLKHRFVLRE 273 (308)
T ss_pred HhhCcccccc
Confidence 9999998754
No 364
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=1.7e-33 Score=294.20 Aligned_cols=298 Identities=18% Similarity=0.256 Sum_probs=212.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
...|+-..+||+|.||.||+|+.+ +..||+|++-.+ .+.+.|.....+|+.+|..++|+|++.+++.+....
T Consensus 16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlme------neKeGfpitalreikiL~~lkHenv~nliEic~tk~ 89 (376)
T KOG0669|consen 16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLME------NEKEGFPITALREIKILQLLKHENVVNLIEICRTKA 89 (376)
T ss_pred chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHh------ccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhcc
Confidence 445888899999999999999874 445566543322 112233334479999999999999999998876533
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.- .-+.....|+||.+|+ .+|..++.+ ...+++..++.+++.+++.||.|+|+..|+|||+||.|+||+
T Consensus 90 Tp------~~r~r~t~ylVf~~ce-hDLaGlLsn----~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt 158 (376)
T KOG0669|consen 90 TP------TNRDRATFYLVFDFCE-HDLAGLLSN----RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT 158 (376)
T ss_pred CC------cccccceeeeeHHHhh-hhHHHHhcC----ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc
Confidence 21 1112335799999998 799998865 235799999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++.+....... .+.....+-|.+|++||.+.+ ...|+++.|||+.||++.||
T Consensus 159 ~d-------gilklADFGlar~fs~~~n~~------kprytnrvvTLwYrppEllLG---~r~yg~~iDiWgAgCimaeM 222 (376)
T KOG0669|consen 159 KD-------GILKLADFGLARAFSTSKNVV------KPRYTNRVVTLWYRPPELLLG---DREYGPPIDIWGAGCIMAEM 222 (376)
T ss_pred CC-------ceEEeeccccccceecccccC------CCCcccceeeeecCCHHHhhc---ccccCCcchhHhHHHHHHHH
Confidence 98 899999999997765433221 112334567999999999998 45789999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCC---CCCchhHHhhhc---cCccccccccCCCCCC-chhhhhhHHHHHHHHHHhcccC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGK---RPRLTDELEALG---SCHEHEVAQSGSGFEK-PEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~---~p~l~~~l~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
+|+.+-+++....+....|.... .+..+...+..+ ......+.+....... ...+....++..+|+..+|..|
T Consensus 223 wtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~D 302 (376)
T KOG0669|consen 223 WTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLD 302 (376)
T ss_pred HccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccC
Confidence 99999999887777666663321 111111111000 0000000000000000 0000123457889999999999
Q ss_pred CCCCCCHHHHHHHHHhhcCC
Q 001143 1116 PTERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~~~s 1135 (1141)
|.+|++++++++|.||....
T Consensus 303 P~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 303 PTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred cccCcchHhhhchhhhhcCC
Confidence 99999999999999998654
No 365
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.98 E-value=1.7e-31 Score=299.64 Aligned_cols=259 Identities=24% Similarity=0.254 Sum_probs=193.8
Q ss_pred CceEeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 880 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~-----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~ 880 (1141)
+|++.+.||+|++|.||+|++ .+..+++|+.+.... .........+.+|+.++.++ +||||+++++.+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~----~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~ 76 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI----VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQT 76 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH----HhhhhHHHHHHHHHHHHHhccCCcchhhhheeeec
Confidence 488999999999999999985 345688887542211 11111122347899999999 59999999998875
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..++||||+++++|.+++.. ...+++..+..++.|++.||.|||+.+++||||||+||+
T Consensus 77 ~~--------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil 137 (288)
T cd05583 77 DT--------------KLHLILDYVNGGELFTHLYQ-----REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENIL 137 (288)
T ss_pred CC--------------EEEEEEecCCCCcHHHHHhh-----cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeE
Confidence 44 34899999999999999865 246899999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.++|+|||++......... ......|+..|+|||.+.+.. ...+.++||||||+++|
T Consensus 138 ~~~~-------~~~~l~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~--~~~~~~~Dv~slG~il~ 199 (288)
T cd05583 138 LDSE-------GHVVLTDFGLSKEFLAEEEE---------RAYSFCGTIEYMAPEVIRGGS--GGHDKAVDWWSLGVLTF 199 (288)
T ss_pred ECCC-------CCEEEEECcccccccccccc---------ccccccCCccccCHHHhcCCC--CCCcchhhhHHHHHHHH
Confidence 9877 78999999998654322110 111335789999999986521 23578999999999999
Q ss_pred HHHhCCCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1041 ELLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+|++|..||..... .+....+..... .. ....+..+.+++.+||+.||
T Consensus 200 el~tg~~p~~~~~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~l~~li~~~l~~~p 251 (288)
T cd05583 200 ELLTGASPFTVDGEQNSQSEISRRILKSKP-PF---------------------------PKTMSAEARDFIQKLLEKDP 251 (288)
T ss_pred HHHhCCCCcccCcccchHHHHHHHHHccCC-CC---------------------------CcccCHHHHHHHHHHhcCCH
Confidence 99999999964321 112222111110 00 01344568999999999999
Q ss_pred CCCCC---HHHHHHHHHhhcC
Q 001143 1117 TERPT---AGDLYEMFVARTS 1134 (1141)
Q Consensus 1117 ~~RPS---a~ElL~~L~~~~~ 1134 (1141)
++||| +.++++|+|++.-
T Consensus 252 ~~R~t~~~~~~~l~~~~~~~~ 272 (288)
T cd05583 252 KKRLGANGADEIKNHPFFQGI 272 (288)
T ss_pred hhccCcchHHHHhcCcccccC
Confidence 99998 5677999998754
No 366
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.98 E-value=3e-31 Score=331.88 Aligned_cols=149 Identities=26% Similarity=0.290 Sum_probs=126.0
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
++++|.+.++||+|+||.||+|.+. +..||+|+.+.... .... ....+..|+.++..++||||+++++.+...
T Consensus 2 ~~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~-~~~~----~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~ 76 (669)
T cd05610 2 SIEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM-INKN----MVHQVQAERDALALSKSPFIVHLYYSLQSA 76 (669)
T ss_pred ccCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc-cCHH----HHHHHHHHHHHHHhcCCCCcCeEEEEEEEC
Confidence 3678999999999999999999986 67888888653221 1112 223347899999999999999999888765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. +.|+||||++|++|.+++.. ...+++..++.|+.||+.||+|||+++|+||||||+|||+
T Consensus 77 ~--------------~~~lVmEy~~g~~L~~li~~-----~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl 137 (669)
T cd05610 77 N--------------NVYLVMEYLIGGDVKSLLHI-----YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLI 137 (669)
T ss_pred C--------------EEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEE
Confidence 4 35999999999999999975 2358899999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccc
Q 001143 962 DLERKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~ 983 (1141)
+.+ +.+||+|||+++
T Consensus 138 ~~~-------g~vkL~DFGls~ 152 (669)
T cd05610 138 SNE-------GHIKLTDFGLSK 152 (669)
T ss_pred cCC-------CCEEEEeCCCCc
Confidence 877 789999999986
No 367
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.98 E-value=1.9e-32 Score=292.88 Aligned_cols=261 Identities=25% Similarity=0.286 Sum_probs=202.5
Q ss_pred CCCceE-eeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001143 805 FPSLSS-CDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 880 (1141)
Q Consensus 805 ~~~y~i-~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~ 880 (1141)
.++|++ .++||-|-.|.|-.+.++ +..+|+|+. .. ... ..+|+++.-.. .|||||.++++|..
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL--~D---s~K--------ARrEVeLHw~~s~h~~iV~IidVyeN 126 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVL--LD---SPK--------ARREVELHWMASGHPHIVSIIDVYEN 126 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHH--hc---CHH--------HHhHhhhhhhhcCCCceEEeehhhhh
Confidence 345643 478999999999999874 556777763 21 111 15788877555 59999999999875
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.-. ....+.+|||.++||.|++.|++ .+...+++.++-.|++||..|+.|||+.+|.||||||+|+|
T Consensus 127 s~~----------~rkcLLiVmE~meGGeLfsriq~---~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLL 193 (400)
T KOG0604|consen 127 SYQ----------GRKCLLIVMECMEGGELFSRIQD---RGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLL 193 (400)
T ss_pred hcc----------CceeeEeeeecccchHHHHHHHH---cccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhhee
Confidence 321 12356899999999999999987 56668999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
..... ....+||+|||+|+.-.... ...+.+.||+|.|||++.. ..|+...|+||+||++|
T Consensus 194 yt~t~----~na~lKLtDfGFAK~t~~~~-----------~L~TPc~TPyYvaPevlg~----eKydkscdmwSlgVimY 254 (400)
T KOG0604|consen 194 YTTTS----PNAPLKLTDFGFAKETQEPG-----------DLMTPCFTPYYVAPEVLGP----EKYDKSCDMWSLGVIMY 254 (400)
T ss_pred eecCC----CCcceEecccccccccCCCc-----------cccCCcccccccCHHHhCc----hhcCCCCCccchhHHHH
Confidence 97652 33789999999997643211 1224468999999999865 56899999999999999
Q ss_pred HHHhCCCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1041 ELLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
-|+.|.+||..... ..+...|..+... +..+++. ..+++.+++|+.+|..+|
T Consensus 255 IlLCGyPPFYS~hg~aispgMk~rI~~gqy~-----------------------FP~pEWs-~VSe~aKdlIR~LLkt~P 310 (400)
T KOG0604|consen 255 ILLCGYPPFYSNHGLAISPGMKRRIRTGQYE-----------------------FPEPEWS-CVSEAAKDLIRKLLKTEP 310 (400)
T ss_pred HhhcCCCcccccCCccCChhHHhHhhccCcc-----------------------CCChhHh-HHHHHHHHHHHHHhcCCc
Confidence 99999999975332 2234455444432 1122222 778899999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001143 1117 TERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~ 1134 (1141)
.+|.|+.++++|+|..+.
T Consensus 311 teRlTI~~~m~hpwi~~~ 328 (400)
T KOG0604|consen 311 TERLTIEEVMDHPWINQY 328 (400)
T ss_pred hhheeHHHhhcCchhccc
Confidence 999999999999998754
No 368
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.98 E-value=4.1e-31 Score=303.65 Aligned_cols=280 Identities=20% Similarity=0.232 Sum_probs=197.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
-++|++.+.||.|+||.||+|.+. +..+++|..... .......+.+ .+|+.++++++||||+++++++....
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~E~~~l~~l~hpniv~~~~~~~~~~ 82 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKP--FSTPVLAKRT----YRELKLLKHLRHENIISLSDIFISPL 82 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccc--ccccchhHHH----HHHHHHHHhcCCCCeeeEeeeEecCC
Confidence 356999999999999999999875 455677754322 1111222233 68999999999999999999886532
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. ..++||||+ +++|.++++. ..+++..+..++.||+.||.|||++||+||||+|+||+++
T Consensus 83 ~-------------~~~lv~e~~-~~~L~~~~~~------~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~ 142 (328)
T cd07856 83 E-------------DIYFVTELL-GTDLHRLLTS------RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN 142 (328)
T ss_pred C-------------cEEEEeehh-ccCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC
Confidence 1 358999999 4789888764 3588899999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.++|+|||.+...... .....++..|+|||.+.+ ...++.++|||||||++|+|
T Consensus 143 ~~-------~~~~l~dfg~~~~~~~~-------------~~~~~~~~~y~aPE~~~~---~~~~~~~~Dv~slG~il~el 199 (328)
T cd07856 143 EN-------CDLKICDFGLARIQDPQ-------------MTGYVSTRYYRAPEIMLT---WQKYDVEVDIWSAGCIFAEM 199 (328)
T ss_pred CC-------CCEEeCccccccccCCC-------------cCCCcccccccCceeeec---cCCcCcHHHHHHHHHHHHHH
Confidence 76 78999999998643221 112357888999998754 24578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcc-ccccccC--CCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE-HEVAQSG--SGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
++|+.||...........+.........+.......... ....... ............+..+.++|.+||+.+|++|
T Consensus 200 ~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R 279 (328)
T cd07856 200 LEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKR 279 (328)
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhC
Confidence 999999987665443333322111111111000000000 0000000 0000001111356789999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
|++.+++.|+|+..
T Consensus 280 ~t~~ell~~~~~~~ 293 (328)
T cd07856 280 ISAAEALAHPYLAP 293 (328)
T ss_pred CCHHHHhcCCcccc
Confidence 99999999999854
No 369
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.98 E-value=9.7e-32 Score=320.52 Aligned_cols=265 Identities=24% Similarity=0.369 Sum_probs=217.9
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~ 881 (1141)
-+-|++.++||.|.+|.||+++. .++.+|+||+.... +..++. ..|.++++.. .|||++.+|++|.-.
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~-----d~deEi----E~eynil~~~~~hpnv~~fyg~~~k~ 88 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTE-----DEEEEI----ELEYNMLKKYSHHPNVATFYGAFIKK 88 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCc-----cccHHH----HHHHHHHHhccCCCCcceEEEEEEEe
Confidence 34589999999999999999875 67889999975443 222222 5688999888 599999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+.. ...++|||||||.|||..++++.+. ..++.|..+..|++.++.|+.|||.+.++|||||-.|||+
T Consensus 89 ~~~---------~~DqLWLVMEfC~gGSVTDLVKn~~---g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLL 156 (953)
T KOG0587|consen 89 DPG---------NGDQLWLVMEFCGGGSVTDLVKNTK---GNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLL 156 (953)
T ss_pred cCC---------CCCeEEEEeeccCCccHHHHHhhhc---ccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEE
Confidence 432 3458899999999999999999854 5579999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~ 1040 (1141)
+.+ +.|||+|||.+..++... ....+++|||.|||||++..+. ....|+.++|+||||++..
T Consensus 157 T~e-------~~VKLvDFGvSaQldsT~----------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaI 219 (953)
T KOG0587|consen 157 TEN-------AEVKLVDFGVSAQLDSTV----------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAI 219 (953)
T ss_pred ecc-------CcEEEeeeeeeeeeeccc----------ccccCcCCCcccccceeeecccCCCCCcccccchhhccceee
Confidence 998 889999999998766522 2345778999999999997643 2456789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
||..|.+|+..+.++..+-.|....+|.+... ...++++.++|..||..|-.+||
T Consensus 220 EladG~PPl~DmHPmraLF~IpRNPPPkLkrp-------------------------~kWs~~FndFIs~cL~Kd~e~RP 274 (953)
T KOG0587|consen 220 EMAEGAPPLCDMHPMRALFLIPRNPPPKLKRP-------------------------KKWSKKFNDFISTCLVKDYEQRP 274 (953)
T ss_pred hhcCCCCCccCcchhhhhccCCCCCCccccch-------------------------hhHHHHHHHHHHHHHhhccccCc
Confidence 99999999988777655555544444433211 15677899999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001143 1121 TAGDLYEMFVAR 1132 (1141)
Q Consensus 1121 Sa~ElL~~L~~~ 1132 (1141)
++.++++|+|..
T Consensus 275 ~~~~ll~hpFi~ 286 (953)
T KOG0587|consen 275 STEELLKHPFIT 286 (953)
T ss_pred chhhhccCCccc
Confidence 999999999876
No 370
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-31 Score=299.52 Aligned_cols=266 Identities=26% Similarity=0.384 Sum_probs=204.5
Q ss_pred CceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC--CCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL--RHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L--~HpNIVkllg~~~~~~~~ 884 (1141)
+..+.+.||+|.||.||+|+|.+..||||||.-. ++ ..+.+|.+|.... +|+||..|++.-..+.
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~sr------dE-----~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-- 278 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSR------DE-----RSWFRETEIYQTVMLRHENILGFIAADNKDN-- 278 (513)
T ss_pred eeEEEEEecCccccceeeccccCCceEEEEeccc------ch-----hhhhhHHHHHHHHHhccchhhhhhhccccCC--
Confidence 4689999999999999999999999999998522 21 2335777777654 8999999998754432
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCC
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------HIMHRDIKS 956 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~--------gIvHrDLKP 956 (1141)
....++|||++|-+.|||+|++.+ ..++....++++..+|.||+|||.. .|.|||||+
T Consensus 279 --------gs~TQLwLvTdYHe~GSL~DyL~r------~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS 344 (513)
T KOG2052|consen 279 --------GSWTQLWLVTDYHEHGSLYDYLNR------NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS 344 (513)
T ss_pred --------CceEEEEEeeecccCCcHHHHHhh------ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence 246789999999999999999986 4699999999999999999999952 599999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC--CchhhHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY--GLEVDIWS 1034 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~--s~ksDVWS 1034 (1141)
.||||..+ +.+-|+|+|+|.........- ...++..+||..|||||++........+ -..+||||
T Consensus 345 KNILVKkn-------~~C~IADLGLAv~h~~~t~~i------di~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYa 411 (513)
T KOG2052|consen 345 KNILVKKN-------GTCCIADLGLAVRHDSDTDTI------DIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYA 411 (513)
T ss_pred ccEEEccC-------CcEEEeeceeeEEecccCCcc------cCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHH
Confidence 99999988 899999999998765543221 1234566899999999999764332222 25799999
Q ss_pred HHHHHHHHHhC----------CCCCCC-----CCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhhh
Q 001143 1035 YGCLLLELLTL----------QVPYMG-----LSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAEL 1098 (1141)
Q Consensus 1035 LGviL~ELLTG----------k~Pf~~-----~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 1098 (1141)
||.++||++-. +.||.+ .+..++.+.+ ....+|.++..+.. .
T Consensus 412 fgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s----------------------~ 469 (513)
T KOG2052|consen 412 FGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKS----------------------D 469 (513)
T ss_pred HHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCCCCCccccc----------------------C
Confidence 99999999853 577754 2334444444 33444444433221 1
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1099 ETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1099 ~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
+....+.++++.||..+|.-|.||--+-+.+-...+
T Consensus 470 ~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 470 PALRVMAKLMKECWYANPAARLTALRIKKTLAKLSN 505 (513)
T ss_pred HHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHHhc
Confidence 566778999999999999999999888877766543
No 371
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=3.8e-31 Score=289.19 Aligned_cols=245 Identities=30% Similarity=0.354 Sum_probs=193.8
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 814 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 814 LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
||+|+||.||++.+. +..+++|+....... ....... +..|+.++++++||||+++++.+.....
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~-~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~~-------- 67 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKII-KRKEVEH----TLTERNILSRINHPFIVKLHYAFQTEEK-------- 67 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhc-chHHHHH----HHHHHHHHHHcCCCcHHHHHHHeecCCe--------
Confidence 699999999999985 567777775433211 1122223 3789999999999999999999876543
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 971 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~ 971 (1141)
.++||||+++++|.+++.. ...+++..+..++.||+.||.|||+.+++|+||+|+||+++.+
T Consensus 68 ------~~~v~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~------- 129 (250)
T cd05123 68 ------LYLVLEYAPGGELFSHLSK-----EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDAD------- 129 (250)
T ss_pred ------eEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCC-------
Confidence 4999999999999999976 2368999999999999999999999999999999999999887
Q ss_pred CeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Q 001143 972 PVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG 1051 (1141)
Q Consensus 972 ~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~ 1051 (1141)
+.++|+|||.+....... .......++..|+|||...+ ..++.++|+||||+++|+|++|+.||..
T Consensus 130 ~~~~l~d~~~~~~~~~~~----------~~~~~~~~~~~~~~Pe~~~~----~~~~~~~D~~slG~~~~~l~~g~~p~~~ 195 (250)
T cd05123 130 GHIKLTDFGLAKELSSEG----------SRTNTFCGTPEYLAPEVLLG----KGYGKAVDWWSLGVLLYEMLTGKPPFYA 195 (250)
T ss_pred CcEEEeecCcceecccCC----------CcccCCcCCccccChHHhCC----CCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 789999999987653321 01123457889999999876 4467899999999999999999999987
Q ss_pred CCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH---HHHHHH
Q 001143 1052 LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA---GDLYEM 1128 (1141)
Q Consensus 1052 ~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa---~ElL~~ 1128 (1141)
....+....+.... ..++ ...+..+.+++.+||..||++||++ .++++|
T Consensus 196 ~~~~~~~~~~~~~~-~~~~---------------------------~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 196 EDRKEIYEKILKDP-LRFP---------------------------EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred CCHHHHHHHHhcCC-CCCC---------------------------CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 66555554443311 1111 0235668999999999999999999 899999
Q ss_pred HHh
Q 001143 1129 FVA 1131 (1141)
Q Consensus 1129 L~~ 1131 (1141)
+||
T Consensus 248 ~~f 250 (250)
T cd05123 248 PFF 250 (250)
T ss_pred CCC
Confidence 986
No 372
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.97 E-value=6.1e-32 Score=308.72 Aligned_cols=265 Identities=21% Similarity=0.319 Sum_probs=205.3
Q ss_pred CCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
-..+.+.++||+|-||.|.++...+ ..||||+.+-.. ......+| .+|+++|.+|+|||||+++|++..++.
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a---~~~~r~~F----~kEIkiLsqLkhPNIveLvGVC~~DeP 609 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDA---TKNARNDF----LKEIKILSRLKHPNIVELLGVCVQDDP 609 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCccc---chhHHHHH----HHHHHHHhccCCCCeeEEEeeeecCCc
Confidence 3446899999999999999998765 788888754321 12223444 899999999999999999999998775
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+ ++||||+++|+|.+++.+.. ...+......+|+.||+.|++||.+.++|||||.+.|+|++.
T Consensus 610 i--------------cmI~EYmEnGDLnqFl~ahe---apt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~ 672 (807)
T KOG1094|consen 610 L--------------CMITEYMENGDLNQFLSAHE---LPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDG 672 (807)
T ss_pred h--------------HHHHHHHhcCcHHHHHHhcc---CcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecC
Confidence 5 99999999999999998732 122455667789999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +++||+|||+++.+-..... ......+-...|||||.+.- ..++.++|||+||+++||++
T Consensus 673 e-------~~iKiadfgmsR~lysg~yy--------~vqgr~vlpiRwmawEsill----gkFttaSDvWafgvTlwE~~ 733 (807)
T KOG1094|consen 673 E-------FTIKIADFGMSRNLYSGDYY--------RVQGRAVLPIRWMAWESILL----GKFTTASDVWAFGVTLWEVF 733 (807)
T ss_pred c-------ccEEecCcccccccccCCce--------eeecceeeeeeehhHHHHHh----ccccchhhhhhhHHHHHHHH
Confidence 8 89999999999865432211 11223456789999999886 68899999999999999998
Q ss_pred h--CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1044 T--LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1044 T--Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
+ ...||......++.+.....-...-.. . .+..+.-++..+.+++.+||..|-.+||+
T Consensus 734 ~~C~e~Py~~lt~e~vven~~~~~~~~~~~-----------~---------~l~~P~~cp~~lyelml~Cw~~es~~RPs 793 (807)
T KOG1094|consen 734 MLCREQPYSQLTDEQVVENAGEFFRDQGRQ-----------V---------VLSRPPACPQGLYELMLRCWRRESEQRPS 793 (807)
T ss_pred HHHhhCchhhhhHHHHHHhhhhhcCCCCcc-----------e---------eccCCCcCcHHHHHHHHHHhchhhhcCCC
Confidence 7 678998877777665432211100000 0 00111257788999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001143 1122 AGDLYEMFVAR 1132 (1141)
Q Consensus 1122 a~ElL~~L~~~ 1132 (1141)
++++..++...
T Consensus 794 Fe~lh~~lq~~ 804 (807)
T KOG1094|consen 794 FEQLHLFLQED 804 (807)
T ss_pred HHHHHHHHHHh
Confidence 99998877643
No 373
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=5.3e-32 Score=331.23 Aligned_cols=282 Identities=25% Similarity=0.355 Sum_probs=197.9
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|+..+.||+||||.||+++. .+..+|+|-..++ . ..... .++.+|+..+++|+|||||++|..+.+..
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~--~-s~~~~----skI~rEVk~LArLnHpNVVRYysAWVEs~ 550 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLK--A-SDKLY----SKILREVKLLARLNHPNVVRYYSAWVEST 550 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCc--h-HHHHH----HHHHHHHHHHhhcCCcceeeeehhhhccC
Confidence 45678999999999999999997 5777888765443 2 11222 23479999999999999999997765321
Q ss_pred ------------------------------------------------------CCC------C----------CCC---
Q 001143 883 ------------------------------------------------------WLP------S----------ADG--- 889 (1141)
Q Consensus 883 ------------------------------------------------------~~~------~----------~~g--- 889 (1141)
..+ . .++
T Consensus 551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~ 630 (1351)
T KOG1035|consen 551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL 630 (1351)
T ss_pred CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence 000 0 000
Q ss_pred --------------------------C-Cc-----cccceEEEEEeeccCCCHHHHHHHhhhcCCCCC-CHHHHHHHHHH
Q 001143 890 --------------------------N-PE-----HHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHV-SVKLALFIAQD 936 (1141)
Q Consensus 890 --------------------------~-~~-----~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~L-s~~~i~~Ia~Q 936 (1141)
+ .+ .....+||-||||+...|.++|++ .... .....+++++|
T Consensus 631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~-----N~~~~~~d~~wrLFre 705 (1351)
T KOG1035|consen 631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRR-----NHFNSQRDEAWRLFRE 705 (1351)
T ss_pred ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHh-----cccchhhHHHHHHHHH
Confidence 0 00 012468999999998777788776 1122 47789999999
Q ss_pred HHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccc-------ccc-ccccccCCCCCCCCccCC
Q 001143 937 VAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRS-------FLH-TCCIAHRGIPAPDVCVGT 1008 (1141)
Q Consensus 937 Ia~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~-------~~~-~~~~~~~~~~~~~~~~GT 1008 (1141)
|+.||.|+|++|||||||||.|||++.+ ..|||+|||+|+.... ... ...............+||
T Consensus 706 IlEGLaYIH~~giIHRDLKP~NIFLd~~-------~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGT 778 (1351)
T KOG1035|consen 706 ILEGLAYIHDQGIIHRDLKPRNIFLDSR-------NSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGT 778 (1351)
T ss_pred HHHHHHHHHhCceeeccCCcceeEEcCC-------CCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccce
Confidence 9999999999999999999999999987 7899999999987220 000 001111111234567899
Q ss_pred CcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccC
Q 001143 1009 PRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSG 1088 (1141)
Q Consensus 1009 ~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~ 1088 (1141)
..|+|||++.+... ..|+.|+|+||+||+++||+ +||. ..++-...+..-+.+.++..
T Consensus 779 alYvAPEll~~~~~-~~Yn~KiDmYSLGIVlFEM~---yPF~--TsMERa~iL~~LR~g~iP~~---------------- 836 (1351)
T KOG1035|consen 779 ALYVAPELLSDTSS-NKYNSKIDMYSLGIVLFEML---YPFG--TSMERASILTNLRKGSIPEP---------------- 836 (1351)
T ss_pred eeeecHHHhccccc-ccccchhhhHHHHHHHHHHh---ccCC--chHHHHHHHHhcccCCCCCC----------------
Confidence 99999999987443 47999999999999999998 3564 34444444433333333321
Q ss_pred CCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1089 SGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1089 ~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
+++..+..+.-..+|+.|++.||.+||||.|+|++=++-
T Consensus 837 -----~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llp 875 (1351)
T KOG1035|consen 837 -----ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLP 875 (1351)
T ss_pred -----cccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence 011113334467899999999999999999999876654
No 374
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-32 Score=298.24 Aligned_cols=261 Identities=25% Similarity=0.320 Sum_probs=210.7
Q ss_pred CCCCCCCCceEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001143 800 LDPGSFPSLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 876 (1141)
Q Consensus 800 ~~~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg 876 (1141)
.+.....+|.+..+||+|+||.|.+|..+++ .+|+||.+.++.... ++.+-- +.|-++|.-. +-|.+++++.
T Consensus 343 ~d~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQd-DDvect----m~EKrvLAL~~kppFL~qlHS 417 (683)
T KOG0696|consen 343 RDRIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQD-DDVECT----MVEKRVLALPGKPPFLVQLHS 417 (683)
T ss_pred ccceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeec-Ccccce----ehhhhheecCCCCchHHHHHH
Confidence 3455677899999999999999999988654 578887654443222 222222 4677777666 5889999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
.|..-+.+ |+||||+.||+|.-.|++. +.+.+..+..++..|+-||-|||++|||+||||.
T Consensus 418 cFQTmDRL--------------yFVMEyvnGGDLMyhiQQ~-----GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKL 478 (683)
T KOG0696|consen 418 CFQTMDRL--------------YFVMEYVNGGDLMYHIQQV-----GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKL 478 (683)
T ss_pred Hhhhhhhe--------------eeEEEEecCchhhhHHHHh-----cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccc
Confidence 99876644 9999999999999999873 4688899999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
+|||++.+ |++||.|||+++.--... ....+++|||.|+|||++.. .+|+..+|+||||
T Consensus 479 DNvmLd~e-------GHiKi~DFGmcKEni~~~----------~TTkTFCGTPdYiAPEIi~Y----qPYgksvDWWa~G 537 (683)
T KOG0696|consen 479 DNVMLDSE-------GHIKIADFGMCKENIFDG----------VTTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFG 537 (683)
T ss_pred cceEeccC-------CceEeeecccccccccCC----------cceeeecCCCcccccceEEe----cccccchhHHHHH
Confidence 99999998 999999999997532211 12346789999999999987 6899999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1037 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|+||||+.|++||.+.++.+++..|...... .+ ...+.++.+++...|...|
T Consensus 538 VLLyEmlaGQpPFdGeDE~elF~aI~ehnvs-yP---------------------------KslSkEAv~ickg~ltK~P 589 (683)
T KOG0696|consen 538 VLLYEMLAGQPPFDGEDEDELFQAIMEHNVS-YP---------------------------KSLSKEAVAICKGLLTKHP 589 (683)
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHccCc-Cc---------------------------ccccHHHHHHHHHHhhcCC
Confidence 9999999999999999999999888543221 01 0456678899999999999
Q ss_pred CCCCCH-----HHHHHHHHhhc
Q 001143 1117 TERPTA-----GDLYEMFVART 1133 (1141)
Q Consensus 1117 ~~RPSa-----~ElL~~L~~~~ 1133 (1141)
.+|... .+|-.|++|+.
T Consensus 590 ~kRLGcg~~ge~di~~H~FFR~ 611 (683)
T KOG0696|consen 590 GKRLGCGPEGERDIREHPFFRR 611 (683)
T ss_pred ccccCCCCccccchhhCcchhh
Confidence 999543 67888888864
No 375
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-32 Score=309.69 Aligned_cols=264 Identities=26% Similarity=0.309 Sum_probs=221.2
Q ss_pred CCCCCCCCCceEeeeecccCceEEEEEEECCcc--EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 799 GLDPGSFPSLSSCDEAGKSVSSSLFRCKFGSAD--AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 799 ~~~~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~--vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
.+....+.+++.+..||-|+||.|-++..+... .|+|+.+.....+ ..+.+. +..|-.+|..++.|.||++|.
T Consensus 413 e~a~v~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVd-tkQqeH----v~sEr~Im~~~~s~fIvrLYr 487 (732)
T KOG0614|consen 413 EFAQVKLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVD-TKQQEH----VFSERNIMMECRSDFIVRLYR 487 (732)
T ss_pred hhcccchhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccc-hhHHHH----HHhHHHHHHhcCchHHHHHHH
Confidence 455667888999999999999999999886665 5677643322222 222222 268999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
.|.++.++ |+.||-|-||.|+..+++ .+.|+...++.++..++.|++|||++|||+|||||
T Consensus 488 Tfrd~kyv--------------YmLmEaClGGElWTiLrd-----Rg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKP 548 (732)
T KOG0614|consen 488 TFRDSKYV--------------YMLMEACLGGELWTILRD-----RGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKP 548 (732)
T ss_pred Hhccchhh--------------hhhHHhhcCchhhhhhhh-----cCCcccchhhhhHHHHHHHHHHHHhcCceeccCCh
Confidence 99887755 999999999999999987 45799999999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
+|.+++.+ |.+||.|||+|+.+.....++ +++|||.|.|||++.. ...+.++|.||||
T Consensus 549 ENllLd~~-------Gy~KLVDFGFAKki~~g~KTw-----------TFcGTpEYVAPEIILn----KGHD~avDyWaLG 606 (732)
T KOG0614|consen 549 ENLLLDNR-------GYLKLVDFGFAKKIGSGRKTW-----------TFCGTPEYVAPEIILN----KGHDRAVDYWALG 606 (732)
T ss_pred hheeeccC-------CceEEeehhhHHHhccCCcee-----------eecCCcccccchhhhc----cCcchhhHHHHHH
Confidence 99999988 899999999999887755443 5789999999999987 5567999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1037 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+++|||++|.+||.+.+++..+..|..+...- +++..+.....++|+++...+|
T Consensus 607 Ili~ELL~G~pPFs~~dpmktYn~ILkGid~i--------------------------~~Pr~I~k~a~~Lik~LCr~~P 660 (732)
T KOG0614|consen 607 ILIYELLTGSPPFSGVDPMKTYNLILKGIDKI--------------------------EFPRRITKTATDLIKKLCRDNP 660 (732)
T ss_pred HHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh--------------------------hcccccchhHHHHHHHHHhcCc
Confidence 99999999999999999999998887664310 0111556678999999999999
Q ss_pred CCCCC-----HHHHHHHHHhhcC
Q 001143 1117 TERPT-----AGDLYEMFVARTS 1134 (1141)
Q Consensus 1117 ~~RPS-----a~ElL~~L~~~~~ 1134 (1141)
.+|.. +.+|-+|.||..-
T Consensus 661 ~ERLG~~~~gI~DIkkH~Wf~gf 683 (732)
T KOG0614|consen 661 TERLGYQKGGINDIKKHRWFEGF 683 (732)
T ss_pred HhhhccccCChHHHHhhhhhhcC
Confidence 99975 8999999999754
No 376
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.97 E-value=5.6e-32 Score=304.74 Aligned_cols=254 Identities=24% Similarity=0.320 Sum_probs=204.0
Q ss_pred eeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCC
Q 001143 811 CDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 811 ~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
.++||.|.||+||-|++ .++.||||+. ++..........+ ..|++||.+++||.||.+...|+..+.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvI--dKlrFp~kqesql----R~EVaILq~l~HPGiV~le~M~ET~er----- 637 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVI--DKLRFPTKQESQL----RNEVAILQNLHHPGIVNLECMFETPER----- 637 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeee--ecccCCCchHHHH----HHHHHHHHhcCCCCeeEEEEeecCCce-----
Confidence 48899999999999987 5778888874 4433333333333 799999999999999999999987664
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
.++|||-+. |+..++|-. ...+++++...+.++.||+.||.|||-++|+|+||||+|||+....
T Consensus 638 ---------vFVVMEKl~-GDMLEMILS---sEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~--- 701 (888)
T KOG4236|consen 638 ---------VFVVMEKLH-GDMLEMILS---SEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASAS--- 701 (888)
T ss_pred ---------EEEEehhhc-chHHHHHHH---hhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCC---
Confidence 499999997 555555543 2345799999999999999999999999999999999999997652
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
.-..+||||||+|+.+.+.. .....+|||.|.|||++.. ..|+..-|+||.|||+|--++|..|
T Consensus 702 -~FPQvKlCDFGfARiIgEks-----------FRrsVVGTPAYLaPEVLrn----kGyNrSLDMWSVGVIiYVsLSGTFP 765 (888)
T KOG4236|consen 702 -PFPQVKLCDFGFARIIGEKS-----------FRRSVVGTPAYLAPEVLRN----KGYNRSLDMWSVGVIIYVSLSGTFP 765 (888)
T ss_pred -CCCceeeccccceeecchhh-----------hhhhhcCCccccCHHHHhh----ccccccccceeeeEEEEEEeccccc
Confidence 23679999999999887643 2346789999999999987 6789999999999999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHH
Q 001143 1049 YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEM 1128 (1141)
Q Consensus 1049 f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~ 1128 (1141)
|.. ..++-++|+.......+..+. +++....+||..+|+..-.+|.|.++.+.|
T Consensus 766 FNE--dEdIndQIQNAaFMyPp~PW~------------------------eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 766 FNE--DEDINDQIQNAAFMYPPNPWS------------------------EISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred CCC--ccchhHHhhccccccCCCchh------------------------hcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 974 344566665443322211111 566779999999999999999999999999
Q ss_pred HHhhc
Q 001143 1129 FVART 1133 (1141)
Q Consensus 1129 L~~~~ 1133 (1141)
+|.+.
T Consensus 820 ~Wlq~ 824 (888)
T KOG4236|consen 820 PWLQD 824 (888)
T ss_pred hhhhc
Confidence 99864
No 377
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-30 Score=292.70 Aligned_cols=268 Identities=22% Similarity=0.317 Sum_probs=201.0
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC--CCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL--RHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L--~HpNIVkllg~~~~~~ 882 (1141)
.....+.++||+|.||.||+|...++.||||++.. .+.+.| +.|-+|.+-. +|+||++|+++-....
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~-------~~kqs~----~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t 277 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE-------QEKQSF----QNEKNIYSLPGMKHENILQFIGAEKRGT 277 (534)
T ss_pred CCchhhHHHhhcCccceeehhhccCceeEEEecCH-------HHHHHH----HhHHHHHhccCccchhHHHhhchhccCC
Confidence 55678899999999999999999999999999753 333444 6777776544 7999999998754322
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CccccC
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---------HIMHRD 953 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~---------gIvHrD 953 (1141)
.. ...++||+||.+.|+|.++++. ..++|....+|+..|++||+|||+. .|+|||
T Consensus 278 ---------~~-~~eywLVt~fh~kGsL~dyL~~------ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRD 341 (534)
T KOG3653|consen 278 ---------AD-RMEYWLVTEFHPKGSLCDYLKA------NTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRD 341 (534)
T ss_pred ---------cc-ccceeEEeeeccCCcHHHHHHh------ccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCcccccc
Confidence 11 3467999999999999999987 4799999999999999999999962 699999
Q ss_pred CCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC--CCCchhh
Q 001143 954 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVD 1031 (1141)
Q Consensus 954 LKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksD 1031 (1141)
||+.||||..+ +++.|+|||+|..+...... ...-..+||..|||||++.+...-. ..=.+.|
T Consensus 342 lkSkNVLvK~D-------lTccIaDFGLAl~~~p~~~~--------~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~D 406 (534)
T KOG3653|consen 342 LKSKNVLVKND-------LTCCIADFGLALRLEPGKPQ--------GDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRID 406 (534)
T ss_pred ccccceEEccC-------CcEEeeccceeEEecCCCCC--------cchhhhhhhhhhcCHHHHhhhcccccHHHHHHHH
Confidence 99999999988 89999999999887642211 1112368999999999998754221 1115799
Q ss_pred HHHHHHHHHHHHhCCCCCC--C---------------CCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCC
Q 001143 1032 IWSYGCLLLELLTLQVPYM--G---------------LSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEK 1093 (1141)
Q Consensus 1032 VWSLGviL~ELLTGk~Pf~--~---------------~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~ 1093 (1141)
|||+|.++|||+++..-++ . ....++.+.+ ..-.+|.+++.+..
T Consensus 407 vYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~------------------ 468 (534)
T KOG3653|consen 407 VYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRK------------------ 468 (534)
T ss_pred HHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhc------------------
Confidence 9999999999998754332 1 1122233222 33444444433221
Q ss_pred chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 001143 1094 PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1094 ~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~s~ 1136 (1141)
......+.+.+..||..||+.|.|+.=+.+..+.....+
T Consensus 469 ----h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 469 ----HAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred ----CccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccC
Confidence 144667999999999999999999988877777654433
No 378
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-31 Score=311.28 Aligned_cols=212 Identities=25% Similarity=0.362 Sum_probs=169.1
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..+..-+.||+|+||.||++++ .|..+|||.++.. ....+. +++.+|+++|++++|||||++++.-++...
T Consensus 13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~--~~~r~~-----e~~~~EieilkKLnh~NIVk~f~iee~~~~ 85 (732)
T KOG4250|consen 13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKE--SSLRPR-----ERWCREIEILKKLNHPNIVKLFDIEETKFL 85 (732)
T ss_pred cceeehhhhcCCccceeeeecccccccchhHHhhhhh--cccchH-----HHHHHHHHHHHHcCchhhhhhcccCCcccc
Confidence 3457778999999999999997 4667788775432 222221 233799999999999999999987554331
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. .-.....+|||||.||||...+++ +.....+++.+.+.++.++..||.|||++|||||||||.||++..
T Consensus 86 ~--------~~~~~~vlvmEyC~gGsL~~~L~~--PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~ 155 (732)
T KOG4250|consen 86 G--------LVTRLPVLVMEYCSGGSLRKVLNS--PENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQI 155 (732)
T ss_pred C--------cccccceEEEeecCCCcHHHHhcC--cccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEee
Confidence 1 012245899999999999999986 344557999999999999999999999999999999999998855
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
.. ++.-..||+|||+|+.+..... -...+||+.|.+||.+.. ...|+..+|.|||||++|+.+
T Consensus 156 Ge---dgq~IyKLtDfG~Arel~d~s~-----------~~S~vGT~~YLhPel~E~---q~~y~~tVDLWS~GvtlY~ca 218 (732)
T KOG4250|consen 156 GE---DGQSIYKLTDFGAARELDDNSL-----------FTSLVGTEEYLHPELYER---QKKYTATVDLWSFGVTLYECA 218 (732)
T ss_pred cC---CCceEEeeecccccccCCCCCe-----------eeeecCchhhcChHHHhh---ccCcCceeehhhhhhHHHHHh
Confidence 41 2346789999999998766432 236789999999999984 367899999999999999999
Q ss_pred hCCCCCCC
Q 001143 1044 TLQVPYMG 1051 (1141)
Q Consensus 1044 TGk~Pf~~ 1051 (1141)
||..||..
T Consensus 219 TG~lPF~p 226 (732)
T KOG4250|consen 219 TGELPFIP 226 (732)
T ss_pred ccCCCCCc
Confidence 99999953
No 379
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4e-31 Score=292.00 Aligned_cols=286 Identities=19% Similarity=0.222 Sum_probs=205.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC--CCC----ccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSC----IVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--HpN----IVkllg 876 (1141)
-++|.+...+|+|+||.|-.+.+. +..+|+||.+. +..+.+..+-|++++.++. -|+ +|++.+
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~---------V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~ 158 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKN---------VDKYREAALIEIEVLQKINESDPNGKFRCVQMRD 158 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHH---------HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeeh
Confidence 367999999999999999999875 45677776431 1222233468999999994 233 677777
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
+|...+ +.|||+|.+ |-|+++++.. ++..+++...++.|++|++.+++|||+.+++|.||||
T Consensus 159 wFdyrg--------------hiCivfell-G~S~~dFlk~---N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKP 220 (415)
T KOG0671|consen 159 WFDYRG--------------HICIVFELL-GLSTFDFLKE---NNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKP 220 (415)
T ss_pred hhhccC--------------ceEEEEecc-ChhHHHHhcc---CCccccchHHHHHHHHHHHHHHHHHHhcceeecCCCh
Confidence 776554 459999998 5799999986 5677899999999999999999999999999999999
Q ss_pred CCeeeeccc-------------ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001143 957 ENILIDLER-------------KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1023 (1141)
Q Consensus 957 ~NILld~~~-------------~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1023 (1141)
+|||+-... ........|+++|||.|+..... ....+.|..|+|||++.+
T Consensus 221 ENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~-------------hs~iVsTRHYRAPEViLg---- 283 (415)
T KOG0671|consen 221 ENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH-------------HSTIVSTRHYRAPEVILG---- 283 (415)
T ss_pred heEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceeccC-------------cceeeeccccCCchheec----
Confidence 999885431 01223467999999999754331 135678999999999998
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhh-ccCc------c----------ccccc
Q 001143 1024 NLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEAL-GSCH------E----------HEVAQ 1086 (1141)
Q Consensus 1024 ~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~-~~~~------~----------~~~~~ 1086 (1141)
-.++.++||||+||||+|+.||...|+..+..+.+.+++....|......... ...+ . ..+.+
T Consensus 284 LGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~ 363 (415)
T KOG0671|consen 284 LGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFE 363 (415)
T ss_pred cCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhc
Confidence 67899999999999999999999999876665644444333332222221111 0000 0 00000
Q ss_pred cCCCCCCch-hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1087 SGSGFEKPE-AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1087 ~~~~~~~~~-~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
...+...-. .......++.+|+++||.+||.+|+|+.|++.|+||...
T Consensus 364 ~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~ 412 (415)
T KOG0671|consen 364 PCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARL 412 (415)
T ss_pred CCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcC
Confidence 000000000 011334568999999999999999999999999999754
No 380
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.97 E-value=8.2e-31 Score=306.20 Aligned_cols=243 Identities=25% Similarity=0.253 Sum_probs=194.0
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 880 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~ 880 (1141)
..+.|.+...+|.|+|+.|-.+.+ +....++|+.. ..... . .+|+.++... +||||+++.+.+.+
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~--~~~~~------~----~~e~~~~~~~~~h~niv~~~~v~~~ 387 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIIS--KRADD------N----QDEIPISLLVRDHPNIVKSHDVYED 387 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecc--ccccc------c----ccccchhhhhcCCCcceeecceecC
Confidence 466799999999999999999987 45667888743 22111 1 4677777666 69999999999886
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. +.|+|||++.|+-|.+.|.. . +.....+..|+.||+.|+.|||++|||||||||+|||
T Consensus 388 ~~--------------~~~~v~e~l~g~ell~ri~~-----~-~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL 447 (612)
T KOG0603|consen 388 GK--------------EIYLVMELLDGGELLRRIRS-----K-PEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNIL 447 (612)
T ss_pred Cc--------------eeeeeehhccccHHHHHHHh-----c-chhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhhee
Confidence 55 45999999999988887765 1 2333778889999999999999999999999999999
Q ss_pred ee-cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 961 ID-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 961 ld-~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
++ .. ++++|+|||.++.....- ...+-|..|.|||++.. ..|++++||||||++|
T Consensus 448 ~~~~~-------g~lrltyFG~a~~~~~~~-------------~tp~~t~~y~APEvl~~----~~yt~acD~WSLGvlL 503 (612)
T KOG0603|consen 448 LDGSA-------GHLRLTYFGFWSELERSC-------------DTPALTLQYVAPEVLAI----QEYTEACDWWSLGVLL 503 (612)
T ss_pred ecCCC-------CcEEEEEechhhhCchhh-------------cccchhhcccChhhhcc----CCCCcchhhHHHHHHH
Confidence 95 44 889999999997655421 12246888999999985 6899999999999999
Q ss_pred HHHHhCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+|++|+.||...... ++...+..+.. . ..+++.+++|++.||+.||.+
T Consensus 504 y~ML~G~tp~~~~P~~~ei~~~i~~~~~---s---------------------------~~vS~~AKdLl~~LL~~dP~~ 553 (612)
T KOG0603|consen 504 YEMLTGRTLFAAHPAGIEIHTRIQMPKF---S---------------------------ECVSDEAKDLLQQLLQVDPAL 553 (612)
T ss_pred HHHHhCCCccccCCchHHHHHhhcCCcc---c---------------------------cccCHHHHHHHHHhccCChhh
Confidence 9999999999764443 44444433221 1 267788999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001143 1119 RPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~ 1132 (1141)
||++.++..|+|+.
T Consensus 554 Rl~~~~i~~h~w~~ 567 (612)
T KOG0603|consen 554 RLGADEIGAHPWFL 567 (612)
T ss_pred CcChhhhccCcchh
Confidence 99999999999993
No 381
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=5.4e-32 Score=285.45 Aligned_cols=265 Identities=24% Similarity=0.313 Sum_probs=204.5
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~ 884 (1141)
++++-...||.|+||+|++..++...+.++++++..... ..+. .+++.|.....+- +.||||++||....++.
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq----~rll~e~d~~mks~~cp~IVkfyGa~F~EGd- 137 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQ----KRLLMEHDTVMKSSNCPNIVKFYGALFSEGD- 137 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHH----HHHHHHHHHHHhhcCCcHHHHHhhhhhcCCc-
Confidence 445667889999999999999987776666666665433 2222 3447888776555 69999999999765442
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCeeeec
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILIDL 963 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NILld~ 963 (1141)
.||.||+|+ .||..+-+....-....+++...-.|+.-.+.||+||-. ..|||||+||+|||++.
T Consensus 138 -------------cWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr 203 (361)
T KOG1006|consen 138 -------------CWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDR 203 (361)
T ss_pred -------------eeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEec
Confidence 499999997 788777665554555679999999999999999999986 58999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
. |.|||||||.+..+..... ...-+|-.+|||||.+.... ..|+-++||||||++|||++
T Consensus 204 ~-------G~vKLCDFGIcGqLv~SiA-----------kT~daGCrpYmAPERi~p~~--~gyDiRSDvWSLGITL~EvA 263 (361)
T KOG1006|consen 204 H-------GDVKLCDFGICGQLVDSIA-----------KTVDAGCRPYMAPERIDPSD--KGYDIRSDVWSLGITLYEVA 263 (361)
T ss_pred C-------CCEeeecccchHhHHHHHH-----------hhhccCCccccChhccCCcc--CCcchhhhhhhhcceEeeee
Confidence 8 8999999999976544221 12345888999999987633 36889999999999999999
Q ss_pred hCCCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 TLQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 TGk~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
||..||.+-+ ..+....+..+.+|.+...... ...+..+..+|..||.+|-..||..
T Consensus 264 tG~fPyr~w~svfeql~~Vv~gdpp~l~~~~~~----------------------~~~s~~~~~fintCl~Kd~~~Rpky 321 (361)
T KOG1006|consen 264 TGNFPYRKWDSVFEQLCQVVIGDPPILLFDKEC----------------------VHYSFSMVRFINTCLIKDRSDRPKY 321 (361)
T ss_pred cCCCCcchHHHHHHHHHHHHcCCCCeecCcccc----------------------cccCHHHHHHHHHHhhcccccCcch
Confidence 9999997633 3344455556665554322111 1566779999999999999999999
Q ss_pred HHHHHHHHhh
Q 001143 1123 GDLYEMFVAR 1132 (1141)
Q Consensus 1123 ~ElL~~L~~~ 1132 (1141)
.+++++++-+
T Consensus 322 ~~Lk~~~fyr 331 (361)
T KOG1006|consen 322 DDLKKFPFYR 331 (361)
T ss_pred hhhhcCchhh
Confidence 9999998765
No 382
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.3e-31 Score=291.28 Aligned_cols=278 Identities=21% Similarity=0.216 Sum_probs=215.9
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|-+.++||+|+|+.||+|.+ ..+.|||||..+.+.- ..+..+++..-..+|.+|.+.|.||.||++|++|.-+..
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~W-rdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd 541 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNW-RDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD 541 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccch-hhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc
Confidence 4699999999999999999987 5778999997766432 223344555566899999999999999999999975432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--CccccCCCCCCeee
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--HIMHRDIKSENILI 961 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~--gIvHrDLKP~NILl 961 (1141)
.+|-|+|||+|.+|.-+++. .+.+++++++.|+.||+.||.||... .|||-||||.|||+
T Consensus 542 -------------sFCTVLEYceGNDLDFYLKQ-----hklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILL 603 (775)
T KOG1151|consen 542 -------------SFCTVLEYCEGNDLDFYLKQ-----HKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILL 603 (775)
T ss_pred -------------cceeeeeecCCCchhHHHHh-----hhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEE
Confidence 34999999999999999987 45799999999999999999999965 69999999999988
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
-... ..|.+||.|||+++.+...... ...+........||.+|++||.+.-.......+.|+||||.|||+|.
T Consensus 604 v~Gt----acGeIKITDFGLSKIMdddSy~---~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQ 676 (775)
T KOG1151|consen 604 VNGT----ACGEIKITDFGLSKIMDDDSYN---SVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQ 676 (775)
T ss_pred ecCc----ccceeEeeecchhhhccCCccC---cccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhh
Confidence 5431 2378999999999988764422 23345556667899999999998765556778999999999999999
Q ss_pred HHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
.+.|+.||..... .+++. ........ +...|. .+..+.+..+||++||++.-++|.
T Consensus 677 ClYGrKPFGhnqsQQdILq---eNTIlkAt-------------------EVqFP~-KPvVsseAkaFIRRCLaYRKeDR~ 733 (775)
T KOG1151|consen 677 CLYGRKPFGHNQSQQDILQ---ENTILKAT-------------------EVQFPP-KPVVSSEAKAFIRRCLAYRKEDRI 733 (775)
T ss_pred hhccCCCCCCchhHHHHHh---hhchhcce-------------------eccCCC-CCccCHHHHHHHHHHHHhhhhhhh
Confidence 9999999964322 12221 11100000 000000 015566789999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001143 1121 TAGDLYEMFVAR 1132 (1141)
Q Consensus 1121 Sa~ElL~~L~~~ 1132 (1141)
...++..++++.
T Consensus 734 DV~qLA~dpyll 745 (775)
T KOG1151|consen 734 DVQQLACDPYLL 745 (775)
T ss_pred hHHHHccCcccc
Confidence 999999999885
No 383
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3e-29 Score=309.79 Aligned_cols=259 Identities=25% Similarity=0.407 Sum_probs=202.7
Q ss_pred CceEeeeecccCceEEEEEEEC----C---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG----S---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 878 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~----~---~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~ 878 (1141)
+..+.+.||+|+||.|++|... . ..+.|+++.++..... .+.+.+ ..|+.+|+.+ +||||+.++|++
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~----~~El~~m~~~g~H~niv~llG~~ 371 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDL----MSELNVLKELGKHPNIVNLLGAC 371 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHH----HHHHHHHHHhcCCcchhhheeee
Confidence 3467779999999999999742 1 1334444444443333 444555 8999999999 599999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhh---------hcCC--CCCCHHHHHHHHHHHHHHHHHHHHC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLS---------ETGE--KHVSVKLALFIAQDVAAALVELHSK 947 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~---------~~~~--~~Ls~~~i~~Ia~QIa~gL~yLHs~ 947 (1141)
..... .++|+||+..|+|.++++..+ .... ..++..+.+.+++||+.|++||++.
T Consensus 372 t~~~~--------------~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~ 437 (609)
T KOG0200|consen 372 TQDGP--------------LYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV 437 (609)
T ss_pred ccCCc--------------eEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC
Confidence 87553 399999999999999998754 1111 1389999999999999999999999
Q ss_pred CccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccC--CCcccchhhhccccCCCC
Q 001143 948 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVG--TPRWMAPEVLRAMHKPNL 1025 (1141)
Q Consensus 948 gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~G--T~~Y~APE~l~~~~~~~~ 1025 (1141)
++|||||-+.|||++.+ ..+||+|||+|+.......... ....+ ...|||||.+.. ..
T Consensus 438 ~~vHRDLAaRNVLi~~~-------~~~kIaDFGlar~~~~~~~y~~---------~~~~~~LP~kWmApEsl~~----~~ 497 (609)
T KOG0200|consen 438 PCVHRDLAARNVLITKN-------KVIKIADFGLARDHYNKDYYRT---------KSSAGTLPVKWMAPESLFD----RV 497 (609)
T ss_pred CccchhhhhhhEEecCC-------CEEEEccccceeccCCCCceEe---------cCCCCccceeecCHHHhcc----Cc
Confidence 99999999999999988 7899999999985443221110 01112 345999999986 67
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHH
Q 001143 1026 YGLEVDIWSYGCLLLELLT-LQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1103 (1141)
Q Consensus 1026 ~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1141)
|+.++|||||||+|||++| |..||.+.. ..++.+.+..|.+...+. .+.++
T Consensus 498 ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~---------------------------~c~~e 550 (609)
T KOG0200|consen 498 FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPE---------------------------HCSDE 550 (609)
T ss_pred ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCC---------------------------CCCHH
Confidence 9999999999999999999 899998755 556666777776644332 56778
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1104 LVDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1104 L~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
+.+++..||+.+|++||++.++.+.+..
T Consensus 551 iY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 551 IYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred HHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 9999999999999999999999887655
No 384
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.96 E-value=2.4e-29 Score=308.03 Aligned_cols=291 Identities=14% Similarity=0.097 Sum_probs=177.0
Q ss_pred CCCCCceEeeeecccCceEEEEEEECC------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGS------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
...++|++.++||+|+||.||+|++.. ..+|+|.. ... ... +.. ..| .+....+.+++.++.
T Consensus 129 ~~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~--~~~--~~~--e~~----~~e--~l~~~~~~~~~~~~~ 196 (566)
T PLN03225 129 FKKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKA--TEY--GAV--EIW----MNE--RVRRACPNSCADFVY 196 (566)
T ss_pred CccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEe--ccc--chh--HHH----HHH--HHHhhchhhHHHHHH
Confidence 457789999999999999999999853 45666643 221 111 111 111 122223334443333
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc---------------CCCCCCHHHHHHHHHHHHHHH
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---------------GEKHVSVKLALFIAQDVAAAL 941 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~---------------~~~~Ls~~~i~~Ia~QIa~gL 941 (1141)
.+..... .......++||||+++++|.++++..... .........+..|+.||+.||
T Consensus 197 ~~~~~~~--------~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL 268 (566)
T PLN03225 197 GFLEPVS--------SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFAL 268 (566)
T ss_pred hhhcccc--------cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHH
Confidence 3222110 01223569999999999999998752100 001122345678999999999
Q ss_pred HHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc
Q 001143 942 VELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH 1021 (1141)
Q Consensus 942 ~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1021 (1141)
.|||+++|+||||||+|||++.+. +.+||+|||+|+.+..... ..+....+|+.|+|||.+....
T Consensus 269 ~yLH~~gIiHRDLKP~NILl~~~~------~~~KL~DFGlA~~l~~~~~---------~~~~~~~~t~~Y~APE~~~~~~ 333 (566)
T PLN03225 269 DGLHSTGIVHRDVKPQNIIFSEGS------GSFKIIDLGAAADLRVGIN---------YIPKEFLLDPRYAAPEQYIMST 333 (566)
T ss_pred HHHHHCCEEeCcCCHHHEEEeCCC------CcEEEEeCCCccccccccc---------cCCcccccCCCccChHHhhccC
Confidence 999999999999999999998642 6899999999975533211 1223456899999999764321
Q ss_pred CC------------------CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcccc
Q 001143 1022 KP------------------NLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHE 1083 (1141)
Q Consensus 1022 ~~------------------~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~ 1083 (1141)
.. ..++.++|||||||++|||+++..|+.. ........+.........+ ..... ...
T Consensus 334 ~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~-~~~~~~~~l~~~~~~~~~~-~~~~~---~~~ 408 (566)
T PLN03225 334 QTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDS-NLIQFNRQLKRNDYDLVAW-RKLVE---PRA 408 (566)
T ss_pred CCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCch-HHHHHHHHHHhcCCcHHHH-HHhhc---ccc
Confidence 11 1234567999999999999997766542 1222223332222111111 00000 000
Q ss_pred ccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCCC
Q 001143 1084 VAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1084 ~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~s~ 1136 (1141)
.......+.. ........++||.+||+.||.+|||+.|+++|+|+.....
T Consensus 409 ~~~~~~~~~~---~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~~ 458 (566)
T PLN03225 409 SPDLRRGFEV---LDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREGL 458 (566)
T ss_pred chhhhhhhhh---ccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCCc
Confidence 0000000000 0012334679999999999999999999999999986544
No 385
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=6.5e-30 Score=300.82 Aligned_cols=252 Identities=23% Similarity=0.323 Sum_probs=204.6
Q ss_pred ceEeeeecccCceEEEEEEEC------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.+..++||+|+||+||+|.|- +.+||+|++.-. .......++ +.|+.+|.++.|||++++++++..+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~---t~~~~s~e~----LdeAl~masldHpnl~RLLgvc~~s 770 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEF---TSPKASIEL----LDEALRMASLDHPNLLRLLGVCMLS 770 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeecc---CCchhhHHH----HHHHHHHhcCCCchHHHHhhhcccc
Confidence 467789999999999999982 345677765322 122223344 7999999999999999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. +.||++|+++|+|.++++.. +..+-.+..+.|..||++||.|||.+++|||||-+.||||
T Consensus 771 ~---------------~qlvtq~mP~G~LlDyvr~h----r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLV 831 (1177)
T KOG1025|consen 771 T---------------LQLVTQLMPLGCLLDYVREH----RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLV 831 (1177)
T ss_pred h---------------HHHHHHhcccchHHHHHHHh----hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheee
Confidence 3 37999999999999999862 3468889999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
..- ..+|+.|||+|+.+........ .....-.+.|||-|.+.. ..|+.++|||||||++||
T Consensus 832 ksP-------~hvkitdfgla~ll~~d~~ey~--------~~~gK~pikwmale~i~~----~~~thqSDVWsfGVtiWE 892 (1177)
T KOG1025|consen 832 KSP-------NHVKITDFGLAKLLAPDEKEYS--------APGGKVPIKWMALESIRI----RKYTHQSDVWSFGVTIWE 892 (1177)
T ss_pred cCC-------CeEEEEecchhhccCccccccc--------ccccccCcHHHHHHHhhc----cCCCchhhhhhhhhhHHH
Confidence 876 7899999999998765443211 112223567999998876 789999999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
++| |..||++....++.+.+..+.+..-+ +.++.++..++.+||..|+..||
T Consensus 893 lmTFGa~Py~gi~~~eI~dlle~geRLsqP---------------------------piCtiDVy~~mvkCwmid~~~rp 945 (1177)
T KOG1025|consen 893 LMTFGAKPYDGIPAEEIPDLLEKGERLSQP---------------------------PICTIDVYMVMVKCWMIDADSRP 945 (1177)
T ss_pred HHhcCCCccCCCCHHHhhHHHhccccCCCC---------------------------CCccHHHHHHHHHHhccCcccCc
Confidence 999 99999999998888887766652211 15677899999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
+|+++...+-.
T Consensus 946 ~fkel~~~fs~ 956 (1177)
T KOG1025|consen 946 TFKELAEEFSR 956 (1177)
T ss_pred cHHHHHHHHHH
Confidence 99999886544
No 386
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=8.8e-30 Score=278.37 Aligned_cols=227 Identities=20% Similarity=0.140 Sum_probs=172.5
Q ss_pred cCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCCccc
Q 001143 817 SVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNPEHH 894 (1141)
Q Consensus 817 GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~~~~ 894 (1141)
|.+|.||+|.+. +..+++|..... . .+ .+|...+....||||+++++++.+..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~--~-------~~----~~~~~~~~~~~~~~i~~~~~~~~~~~------------ 58 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKS--S-------EY----SRERLTIIPHCVPNMVCLHKYIVSED------------ 58 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecch--h-------hh----hhHHHHHHhcCCCceeehhhheecCC------------
Confidence 899999999984 455666664321 1 11 24445555667999999999987654
Q ss_pred cceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeE
Q 001143 895 LLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVV 974 (1141)
Q Consensus 895 ~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~v 974 (1141)
..++||||++|++|.+++.. ...+++..+..++.|++.||+|||++||+||||||+||+++.+ +.+
T Consensus 59 --~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~-------~~~ 124 (237)
T cd05576 59 --SVFLVLQHAEGGKLWSHISK-----FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR-------GHI 124 (237)
T ss_pred --eEEEEEecCCCCCHHHHHHH-----hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCC-------CCE
Confidence 34999999999999999875 2358999999999999999999999999999999999999887 789
Q ss_pred EEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Q 001143 975 KLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSE 1054 (1141)
Q Consensus 975 KL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~ 1054 (1141)
+++|||.+....... ....++..|+|||.+.. ..++.++||||+|+++|+|++|..|+.....
T Consensus 125 ~l~df~~~~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~il~el~~g~~~~~~~~~ 187 (237)
T cd05576 125 QLTYFSRWSEVEDSC-------------DGEAVENMYCAPEVGGI----SEETEACDWWSLGAILFELLTGKTLVECHPS 187 (237)
T ss_pred EEecccchhcccccc-------------ccCCcCccccCCcccCC----CCCCchhhHHHHHHHHHHHHHCcchhhcCch
Confidence 999999875543211 11235677999998765 4567899999999999999999988753211
Q ss_pred HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH-----HHHHHHH
Q 001143 1055 LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA-----GDLYEMF 1129 (1141)
Q Consensus 1055 ~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa-----~ElL~~L 1129 (1141)
. +...... ..+...+..+.+++.+||+.||.+||++ +++++|+
T Consensus 188 ~-----~~~~~~~---------------------------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~ 235 (237)
T cd05576 188 G-----INTHTTL---------------------------NIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHP 235 (237)
T ss_pred h-----ccccccc---------------------------CCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCC
Confidence 0 0000000 0001345678999999999999999996 9999998
Q ss_pred Hh
Q 001143 1130 VA 1131 (1141)
Q Consensus 1130 ~~ 1131 (1141)
|+
T Consensus 236 ~~ 237 (237)
T cd05576 236 FF 237 (237)
T ss_pred CC
Confidence 85
No 387
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.96 E-value=4.2e-30 Score=265.86 Aligned_cols=283 Identities=20% Similarity=0.261 Sum_probs=204.7
Q ss_pred CCCCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceee
Q 001143 800 LDPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYG 876 (1141)
Q Consensus 800 ~~~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg 876 (1141)
++-+..++|++.+++|+|.|+.||.|.. +...+++|+.+- -..+.+ .+|+.||..|. ||||+++++
T Consensus 32 i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-------VkkkKI----kREikIL~nL~gg~NIi~L~D 100 (338)
T KOG0668|consen 32 IDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP-------VKKKKI----KREIKILQNLRGGPNIIKLLD 100 (338)
T ss_pred eeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech-------HHHHHH----HHHHHHHHhccCCCCeeehhh
Confidence 3445678999999999999999999985 566777777431 122233 79999999996 999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
.+.+...- ...+|+||+.+.++..+.. .++..+++.++.|++.||.|+|++||+|||+||
T Consensus 101 iV~Dp~Sk------------tpaLiFE~v~n~Dfk~ly~--------tl~d~dIryY~~elLkALdyCHS~GImHRDVKP 160 (338)
T KOG0668|consen 101 IVKDPESK------------TPSLIFEYVNNTDFKQLYP--------TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKP 160 (338)
T ss_pred hhcCcccc------------CchhHhhhhccccHHHHhh--------hhchhhHHHHHHHHHHHHhHHHhcCcccccCCc
Confidence 98874321 3489999999988877654 388899999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
+|++||... -.++|+|+|+|..+...... ...+.+.+|.-||.+.. -..|+..-|+||||
T Consensus 161 hNvmIdh~~------rkLrlIDWGLAEFYHp~~eY-----------nVRVASRyfKGPELLVd---y~~YDYSLD~WS~G 220 (338)
T KOG0668|consen 161 HNVMIDHEL------RKLRLIDWGLAEFYHPGKEY-----------NVRVASRYFKGPELLVD---YQMYDYSLDMWSLG 220 (338)
T ss_pred ceeeechhh------ceeeeeecchHhhcCCCcee-----------eeeeehhhcCCchheee---chhccccHHHHHHH
Confidence 999999874 47999999999776543221 24567888999999876 35678999999999
Q ss_pred HHHHHHHhCCCCCC-CCCHHHHHHHH-HhCCCCCchhHHhhhccCcc--------ccccccCCCCCCchhhhhhHHHHHH
Q 001143 1037 CLLLELLTLQVPYM-GLSELEIHDLI-QMGKRPRLTDELEALGSCHE--------HEVAQSGSGFEKPEAELETLSFLVD 1106 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~-~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~L~d 1106 (1141)
|++..|+..+.||. +.+..+..-.| .......+...+........ ....+....+...+-..-.++++.+
T Consensus 221 cmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiD 300 (338)
T KOG0668|consen 221 CMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAID 300 (338)
T ss_pred HHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHH
Confidence 99999999999975 33333322222 22221111111111100000 0001111111112212234578999
Q ss_pred HHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1107 VFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1107 LI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
|+.++|.+|..+|+||.|++.|++|..
T Consensus 301 lldklLrYDHqeRlTakEam~HpyF~~ 327 (338)
T KOG0668|consen 301 LLDKLLRYDHQERLTAKEAMAHPYFAP 327 (338)
T ss_pred HHHHHHhhccccccchHHHhcCchHHH
Confidence 999999999999999999999999964
No 388
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.2e-29 Score=279.98 Aligned_cols=285 Identities=22% Similarity=0.281 Sum_probs=199.8
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-----C---CCcccee
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-----H---SCIVEMY 875 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-----H---pNIVkll 875 (1141)
.+|.+.++||.|.|++||+|.+ ..+.||+||.+.. +.+.+..+.||.+|++++ | .+||+++
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA---------qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~Ll 148 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA---------QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLL 148 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh---------hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeee
Confidence 5799999999999999999998 4667888886522 223334479999999984 2 3699999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCC
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDI 954 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDL 954 (1141)
++|...+ .+..|+|+|+|++ |.+|..+|... ..+.++...++.|++||+.||.|||.. ||||-||
T Consensus 149 D~FkhsG----------pNG~HVCMVfEvL-GdnLLklI~~s---~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDl 214 (590)
T KOG1290|consen 149 DHFKHSG----------PNGQHVCMVFEVL-GDNLLKLIKYS---NYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDL 214 (590)
T ss_pred ccceecC----------CCCcEEEEEehhh-hhHHHHHHHHh---CCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCC
Confidence 9998744 3566899999999 78999999874 344699999999999999999999965 9999999
Q ss_pred CCCCeeeeccc---------------------------------------------------------------------
Q 001143 955 KSENILIDLER--------------------------------------------------------------------- 965 (1141)
Q Consensus 955 KP~NILld~~~--------------------------------------------------------------------- 965 (1141)
||+|||+....
T Consensus 215 KPENvLl~~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~ 294 (590)
T KOG1290|consen 215 KPENVLLCSTEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGI 294 (590)
T ss_pred CcceeeeeccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccc
Confidence 99999985430
Q ss_pred ------------------------------------------cc------------------------------------
Q 001143 966 ------------------------------------------KK------------------------------------ 967 (1141)
Q Consensus 966 ------------------------------------------~~------------------------------------ 967 (1141)
+.
T Consensus 295 ~~~~~~~s~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~ 374 (590)
T KOG1290|consen 295 EEEPNQESYNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTI 374 (590)
T ss_pred cccccccccccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCcccc
Confidence 00
Q ss_pred ------------CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001143 968 ------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1035 (1141)
Q Consensus 968 ------------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1035 (1141)
......|||+|||-|....... ..-..|..|+|||++.+ ..|++.+||||+
T Consensus 375 ~~n~~v~p~~~~~~~di~vKIaDlGNACW~~khF-------------T~DIQTRQYRapEVllG----sgY~~~ADiWS~ 437 (590)
T KOG1290|consen 375 ASNPLVNPDIPLPECDIRVKIADLGNACWVHKHF-------------TEDIQTRQYRAPEVLLG----SGYSTSADIWST 437 (590)
T ss_pred ccccccCCCCCCCccceeEEEeeccchhhhhhhh-------------chhhhhhhccCcceeec----CCCCCchhHHHH
Confidence 0001135566666554322100 11257889999999998 789999999999
Q ss_pred HHHHHHHHhCCCCCCC-------CCHHHHHHHH-HhCCCCCchhHHhhhccCccccccc--------cCCCCCC------
Q 001143 1036 GCLLLELLTLQVPYMG-------LSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQ--------SGSGFEK------ 1093 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~-------~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~--------~~~~~~~------ 1093 (1141)
+|++|||+||...|.. .++..+...+ ..+..|+ .+...+......+.. ..+.+..
T Consensus 438 AC~~FELaTGDyLFePhsG~~Y~rDEDHiA~i~ELLG~iPr---~ia~~Gk~SRdFFnr~G~LrhI~~LK~WpL~~VL~e 514 (590)
T KOG1290|consen 438 ACMAFELATGDYLFEPHSGENYSRDEDHIALIMELLGKIPR---KIALGGKYSRDFFNRRGELRHIRRLKPWPLYEVLIE 514 (590)
T ss_pred HHHHHHhhcCceeecCCCCCCCCccHHHHHHHHHHHhhccH---HHHhcCcchHhhhccccceecccccCCCcHHHHHHH
Confidence 9999999999988852 1222222333 2222221 111111111111111 1111111
Q ss_pred -chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1094 -PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1094 -~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
-++..+...++.+|+.-||+.+|++||||.++++|+|...
T Consensus 515 KY~~s~e~A~~fsdFL~PmLef~PeKR~tA~~cl~hPwLn~ 555 (590)
T KOG1290|consen 515 KYEWSEEDAQQFSDFLSPMLEFDPEKRPTAAQCLKHPWLNP 555 (590)
T ss_pred HhCCCHHHHHHHHHHHHHHHhcCccccccHHHHhcCccccC
Confidence 1223466788999999999999999999999999999973
No 389
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.5e-29 Score=287.23 Aligned_cols=265 Identities=22% Similarity=0.265 Sum_probs=196.0
Q ss_pred ceEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|..++.||-|+||.|.+++...+ .+|.|. +.+.. --.++-..-++.|-.||.....+-||++|-.|.+++.+
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKT--LrKaD---Vl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnL- 704 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKT--LRKAD---VLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNL- 704 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhh--hHHHH---HHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCce-
Confidence 57889999999999999986444 445554 33211 11111122347899999999999999999999987755
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
|+||+|++||++.+++-+ .+.|.+..++.++.++..|+++.|..|+|||||||+|||||.+
T Consensus 705 -------------YFVMdYIPGGDmMSLLIr-----mgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrd- 765 (1034)
T KOG0608|consen 705 -------------YFVMDYIPGGDMMSLLIR-----MGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRD- 765 (1034)
T ss_pred -------------EEEEeccCCccHHHHHHH-----hccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccC-
Confidence 999999999999998876 3579999999999999999999999999999999999999998
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCC--------------------------------CCCCCCccCCCcccc
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRG--------------------------------IPAPDVCVGTPRWMA 1013 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~--------------------------------~~~~~~~~GT~~Y~A 1013 (1141)
|++||.|||+|+-+.......+..... .......+||+.|+|
T Consensus 766 ------GHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyia 839 (1034)
T KOG0608|consen 766 ------GHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIA 839 (1034)
T ss_pred ------CceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccC
Confidence 999999999997543322211111000 001123589999999
Q ss_pred hhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCC
Q 001143 1014 PEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFE 1092 (1141)
Q Consensus 1014 PE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~ 1092 (1141)
||++.. ..|+.-+|+||.|||||||+.|+.||....+.+....| .+.....++.
T Consensus 840 pevl~r----~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~--------------------- 894 (1034)
T KOG0608|consen 840 PEVLAR----TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPY--------------------- 894 (1034)
T ss_pred hHHhcc----cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhcccccc---------------------
Confidence 999986 67899999999999999999999999876665543333 2211111110
Q ss_pred CchhhhhhHHHHHHHHHHhcccCCCCCC---CHHHHHHHHHhhc
Q 001143 1093 KPEAELETLSFLVDVFRRCTEENPTERP---TAGDLYEMFVART 1133 (1141)
Q Consensus 1093 ~~~~~~~~~~~L~dLI~~cL~~DP~~RP---Sa~ElL~~L~~~~ 1133 (1141)
....+++..++|.+++ -+++.|. .++||-.|+||+.
T Consensus 895 ----~~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkg 933 (1034)
T KOG0608|consen 895 ----QGNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKG 933 (1034)
T ss_pred ----ccccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccc
Confidence 0145566777776654 3556664 5778999999975
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.7e-29 Score=270.52 Aligned_cols=259 Identities=21% Similarity=0.333 Sum_probs=199.7
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 879 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~ 879 (1141)
..+.+|.+.++||+|+|..|.+++...+ -+|+||.+.+..... +++ .+++.|-.+..+. +||.+|-++.+|.
T Consensus 247 l~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~ndd-edi----dwvqtek~vfe~asn~pflvglhscfq 321 (593)
T KOG0695|consen 247 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDD-EDI----DWVQTEKHVFEQASNNPFLVGLHSCFQ 321 (593)
T ss_pred cccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCc-ccc----hhHHhhHHHHHhccCCCeEEehhhhhc
Confidence 3477899999999999999999988554 466666443322211 112 2347888888777 5999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.+..+ ++|.||++||+|.-++++ +..++++.++.+...|..||.|||++|||+||||.+|+
T Consensus 322 tesrl--------------ffvieyv~ggdlmfhmqr-----qrklpeeharfys~ei~lal~flh~rgiiyrdlkldnv 382 (593)
T KOG0695|consen 322 TESRL--------------FFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNV 382 (593)
T ss_pred ccceE--------------EEEEEEecCcceeeehhh-----hhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccce
Confidence 77644 999999999999888876 45799999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|+|.+ +++||.|+|+++.--.+. ....+++|||.|.|||++.+ ..|+..+|+||+||++
T Consensus 383 lldae-------ghikltdygmcke~l~~g----------d~tstfcgtpnyiapeilrg----eeygfsvdwwalgvlm 441 (593)
T KOG0695|consen 383 LLDAE-------GHIKLTDYGMCKEGLGPG----------DTTSTFCGTPNYIAPEILRG----EEYGFSVDWWALGVLM 441 (593)
T ss_pred EEccC-------CceeecccchhhcCCCCC----------cccccccCCCcccchhhhcc----cccCceehHHHHHHHH
Confidence 99998 899999999997532211 12346789999999999998 6799999999999999
Q ss_pred HHHHhCCCCCCC-------CCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001143 1040 LELLTLQVPYMG-------LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1112 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~-------~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL 1112 (1141)
+||+.|+.||.- .+..+..-++.......++. ..+.....+++.-|
T Consensus 442 femmagrspfdivgm~n~d~ntedylfqvilekqiripr---------------------------slsvkas~vlkgfl 494 (593)
T KOG0695|consen 442 FEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPR---------------------------SLSVKASHVLKGFL 494 (593)
T ss_pred HHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccc---------------------------eeehhhHHHHHHhh
Confidence 999999999962 12222222222112222221 22334667788999
Q ss_pred ccCCCCCC------CHHHHHHHHHhhc
Q 001143 1113 EENPTERP------TAGDLYEMFVART 1133 (1141)
Q Consensus 1113 ~~DP~~RP------Sa~ElL~~L~~~~ 1133 (1141)
.+||.+|. .++++-.|.+|+.
T Consensus 495 nkdp~erlgc~~~~g~~dik~h~ffr~ 521 (593)
T KOG0695|consen 495 NKDPKERLGCRPQTGFSDIKSHAFFRS 521 (593)
T ss_pred cCCcHHhcCCCcccchhhhhcchhhhh
Confidence 99999984 4688888888863
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=7.9e-30 Score=303.10 Aligned_cols=261 Identities=26% Similarity=0.335 Sum_probs=193.0
Q ss_pred ceEeeeecccCceE-EEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSS-LFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~-Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~ 885 (1141)
|.-.+.+|.|+.|+ ||+|.+.++.||||-.. .++...+++|+..|+.- .|||||++|+.-.+..
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll-----------~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q--- 576 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYEGREVAVKRLL-----------EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQ--- 576 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeCCceehHHHHh-----------hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCc---
Confidence 45568899999998 89999999988888532 12223347999999888 4999999998766555
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
..||..|+|. .+|.+++.... ...........+.++.|+++||+|||+.+||||||||.||||+...
T Consensus 577 -----------F~YIalELC~-~sL~dlie~~~-~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~ 643 (903)
T KOG1027|consen 577 -----------FLYIALELCA-CSLQDLIESSG-LDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS 643 (903)
T ss_pred -----------eEEEEehHhh-hhHHHHHhccc-cchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC
Confidence 3599999997 89999998621 1111111144577899999999999999999999999999998741
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
..+...++|+|||+++.+....... .......||-+|+|||++.... -+.++||||+||++|..++|
T Consensus 644 --~~~~~ra~iSDfglsKkl~~~~sS~-------~r~s~~sGt~GW~APE~L~~~~----~~~avDiFslGCvfyYvltg 710 (903)
T KOG1027|consen 644 --ADGTLRAKISDFGLSKKLAGGKSSF-------SRLSGGSGTSGWQAPEQLREDR----KTQAVDIFSLGCVFYYVLTG 710 (903)
T ss_pred --CCcceeEEecccccccccCCCcchh-------hcccCCCCcccccCHHHHhccc----cCcccchhhcCceEEEEecC
Confidence 2334789999999999876543221 1134567999999999998733 35699999999999999995
Q ss_pred -CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1046 -QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1046 -k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
.+||... .+....|..+...... . ....++ ++.+||.+|+++||..||+|.+
T Consensus 711 G~HpFGd~--~~R~~NIl~~~~~L~~-----L------------------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~ 763 (903)
T KOG1027|consen 711 GSHPFGDS--LERQANILTGNYTLVH-----L------------------EPLPDC--EAKDLISRMLNPDPQLRPSATD 763 (903)
T ss_pred CccCCCch--HHhhhhhhcCccceee-----e------------------ccCchH--HHHHHHHHhcCCCcccCCCHHH
Confidence 9999642 2222333333221100 0 000012 7899999999999999999999
Q ss_pred HHHHHHhhcCC
Q 001143 1125 LYEMFVARTSS 1135 (1141)
Q Consensus 1125 lL~~L~~~~~s 1135 (1141)
|+.||+|....
T Consensus 764 VL~HPlFW~~e 774 (903)
T KOG1027|consen 764 VLNHPLFWDSE 774 (903)
T ss_pred HhCCCccCChH
Confidence 99999997653
No 392
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.96 E-value=4.6e-28 Score=261.02 Aligned_cols=241 Identities=33% Similarity=0.424 Sum_probs=187.9
Q ss_pred CceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCCcccc
Q 001143 818 VSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNPEHHL 895 (1141)
Q Consensus 818 sfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~~~~~ 895 (1141)
+||.||+|.+.+ ..+++|+...... ... .+. +.+|+..+++++|+||+++++++....
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~--~~~-~~~----~~~e~~~~~~l~~~~i~~~~~~~~~~~------------- 60 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKI--KKK-RER----ILREISILKKLKHPNIVRLYDVFEDED------------- 60 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEeccccc--ccH-HHH----HHHHHHHHHhCCCCcHHHHHhheeeCC-------------
Confidence 589999999854 6778887543321 111 233 379999999999999999999987643
Q ss_pred ceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEE
Q 001143 896 LQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVK 975 (1141)
Q Consensus 896 ~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vK 975 (1141)
..++||||+++++|.+++.. ...+++..+..++.+++.++.|||+.+++|+||+|+||+++.+ +.++
T Consensus 61 -~~~l~~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~-------~~~~ 127 (244)
T smart00220 61 -KLYLVMEYCDGGDLFDLLKK-----RGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDED-------GHVK 127 (244)
T ss_pred -EEEEEEeCCCCCCHHHHHHh-----ccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCC-------CcEE
Confidence 45999999998899999876 1238999999999999999999999999999999999999887 7899
Q ss_pred EeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCH
Q 001143 976 LCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMG-LSE 1054 (1141)
Q Consensus 976 L~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~-~~~ 1054 (1141)
|+|||.+....... ......++..|++||.+.+ ..++.++||||||+++++|++|..||.. ...
T Consensus 128 l~d~~~~~~~~~~~-----------~~~~~~~~~~~~~pE~~~~----~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~ 192 (244)
T smart00220 128 LADFGLARQLDPGG-----------LLTTFVGTPEYMAPEVLLG----KGYGKAVDVWSLGVILYELLTGKPPFPGDDQL 192 (244)
T ss_pred Eccccceeeecccc-----------ccccccCCcCCCCHHHHcc----CCCCchhhHHHHHHHHHHHHhCCCCCCCCCcH
Confidence 99999997654321 1123457889999999875 5677899999999999999999999976 444
Q ss_pred HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1055 LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1055 ~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
......+.......... ....+..+.+++.+||..+|++||++.++++|+|+
T Consensus 193 ~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 193 LELFKKIGKPKPPFPPP-------------------------EWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred HHHHHHHhccCCCCccc-------------------------cccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 44444433322211100 00145679999999999999999999999999875
No 393
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.95 E-value=9.8e-28 Score=287.70 Aligned_cols=293 Identities=17% Similarity=0.168 Sum_probs=185.3
Q ss_pred CCCCceEeeeecccCceEEEEEEE------------------CCccEEEEEEecccCCCChHHH------HHhHHhHHHH
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF------------------GSADAAAKVRTLKVCGSSADEI------RNFEYSCLGE 859 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~------------------~~~~vAvKI~~l~~~~~~~~~~------~~~~~~~~~E 859 (1141)
+.++|++.++||+|+||+||+|.+ .+..||+|...........+.. ....+....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 1235677764332111000000 0011223467
Q ss_pred HHHHhhCCCCCc-----cceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh---------------
Q 001143 860 VRMLGALRHSCI-----VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE--------------- 919 (1141)
Q Consensus 860 i~iL~~L~HpNI-----Vkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~--------------- 919 (1141)
+.++.+++|.++ +++++++..... ++ .......++||||+++++|.++++....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~----~g--~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~ 296 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTA----DG--AFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKK 296 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccc----cc--cccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCc
Confidence 888888876554 677777754211 01 0112246999999999999999874210
Q ss_pred ----cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccc
Q 001143 920 ----TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA 995 (1141)
Q Consensus 920 ----~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~ 995 (1141)
.....+++..++.++.|++.||.|||+++|+||||||+|||++.+ +.+||+|||++.........
T Consensus 297 l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~-------~~~kL~DFGla~~~~~~~~~---- 365 (507)
T PLN03224 297 IPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVD-------GQVKIIDFGAAVDMCTGINF---- 365 (507)
T ss_pred hhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCC-------CcEEEEeCcCccccccCCcc----
Confidence 011235678899999999999999999999999999999999887 78999999998654321110
Q ss_pred cCCCCCCCCccCCCcccchhhhccccCCC----------------CC--CchhhHHHHHHHHHHHHhCCC-CCCCCCHHH
Q 001143 996 HRGIPAPDVCVGTPRWMAPEVLRAMHKPN----------------LY--GLEVDIWSYGCLLLELLTLQV-PYMGLSELE 1056 (1141)
Q Consensus 996 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~----------------~~--s~ksDVWSLGviL~ELLTGk~-Pf~~~~~~e 1056 (1141)
......+|+.|+|||.+....... .+ ..+.||||+||++++|+++.. ||.......
T Consensus 366 -----~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~ 440 (507)
T PLN03224 366 -----NPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFN 440 (507)
T ss_pred -----CccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhh
Confidence 111223588999999976421100 01 135799999999999999875 665321111
Q ss_pred HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC---CCCCCHHHHHHHHHhhc
Q 001143 1057 IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP---TERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1057 l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP---~~RPSa~ElL~~L~~~~ 1133 (1141)
..+.........+... ......+. .....++..++|+.+||..+| .+|+|++|+++|+||..
T Consensus 441 --~~~~~~~~~~~~~r~~----------~~~~~~~~---~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~Hp~f~~ 505 (507)
T PLN03224 441 --TELRQYDNDLNRWRMY----------KGQKYDFS---LLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSHRFFLP 505 (507)
T ss_pred --hHHhhccchHHHHHhh----------cccCCCcc---cccccChHHHHHHHHHhccCCCCcccCCCHHHHhCCCCcCC
Confidence 0110000000000000 00000011 011456779999999999766 68999999999999964
No 394
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=5.1e-29 Score=281.57 Aligned_cols=280 Identities=21% Similarity=0.266 Sum_probs=209.5
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC------CCCccceeee
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR------HSCIVEMYGH 877 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~------HpNIVkllg~ 877 (1141)
.+|.+....|+|-|++|-+|.+ .+..|||||.+-.. .-.+.- ++|++||++|+ --|+++++.+
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-----~M~KtG----l~EleiLkKL~~AD~Edk~Hclrl~r~ 502 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-----VMHKTG----LKELEILKKLNDADPEDKFHCLRLFRH 502 (752)
T ss_pred ceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-----HHhhhh----hHHHHHHHHhhccCchhhhHHHHHHHH
Confidence 3589999999999999999998 46688999865321 112222 68999999995 3479999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
|...+ |+|||+|-+. .+|.++++.+... ..|....+..++.|+..||.+|-..||+|.||||+
T Consensus 503 F~hkn--------------HLClVFE~Ls-lNLRevLKKyG~n--vGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPD 565 (752)
T KOG0670|consen 503 FKHKN--------------HLCLVFEPLS-LNLREVLKKYGRN--VGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPD 565 (752)
T ss_pred hhhcc--------------eeEEEehhhh-chHHHHHHHhCcc--cceeehHHHHHHHHHHHHHHHHHhcCeeecccCcc
Confidence 88665 4599999996 8999999986443 45899999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||+++.. ..+||||||.|........+ ...-+..|.|||++.| -+|+...|+||.||
T Consensus 566 NiLVNE~k------~iLKLCDfGSA~~~~eneit------------PYLVSRFYRaPEIiLG----~~yd~~iD~WSvgc 623 (752)
T KOG0670|consen 566 NILVNESK------NILKLCDFGSASFASENEIT------------PYLVSRFYRAPEIILG----LPYDYPIDTWSVGC 623 (752)
T ss_pred ceEeccCc------ceeeeccCcccccccccccc------------HHHHHHhccCcceeec----CcccCCccceeece
Confidence 99998764 68999999999765543322 1234667999999998 67899999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHH--HhCCCCCchhH----Hhhhcc----Ccc---cccc-----------ccC-----
Q 001143 1038 LLLELLTLQVPYMGLSELEIHDLI--QMGKRPRLTDE----LEALGS----CHE---HEVA-----------QSG----- 1088 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~~el~~~I--~~~~~p~l~~~----l~~~~~----~~~---~~~~-----------~~~----- 1088 (1141)
+||||.||+..|.+....+++... ..|..|.-.-. .+.... +.. +.+. ++.
T Consensus 624 tLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s 703 (752)
T KOG0670|consen 624 TLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGS 703 (752)
T ss_pred eeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHH
Confidence 999999999999998777765444 34444331100 000000 000 0000 000
Q ss_pred ---CCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1089 ---SGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1089 ---~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
..-..++.......++++|+..||..||++|.|..|+|+|+|+..
T Consensus 704 ~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 704 ELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred HHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 000123334466788999999999999999999999999999853
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.2e-29 Score=267.41 Aligned_cols=290 Identities=17% Similarity=0.250 Sum_probs=203.2
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
-.+.+--+.||.|+||.||.+++......|..+++.........-+ ++.+|+.+|..++|.|+...++...-...
T Consensus 52 q~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~k----rvFre~kmLcfFkHdNVLSaLDILQPph~- 126 (449)
T KOG0664|consen 52 QQDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCK----RVFREIKMLSSFRHDNVLSLLDILQPANP- 126 (449)
T ss_pred cccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHH----HHHHHHHHHHhhccccHHHHHHhcCCCCc-
Confidence 3445667899999999999999854333333333332222222223 34799999999999999999887653211
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
......|+|+|++. .+|...|-. ...++...++-+++||++||+|||+.+|.||||||.|.|++.+
T Consensus 127 --------dfFqEiYV~TELmQ-SDLHKIIVS-----PQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSN 192 (449)
T KOG0664|consen 127 --------SFFQELYVLTELMQ-SDLHKIIVS-----PQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSN 192 (449)
T ss_pred --------hHHHHHHHHHHHHH-hhhhheecc-----CCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccC
Confidence 11224688999996 788888865 3479999999999999999999999999999999999999988
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
..+||||||+|+........ .-...+-|.+|+|||++.+. ..|+.++||||.|||+.|++.
T Consensus 193 -------CvLKICDFGLARvee~d~~~---------hMTqEVVTQYYRAPEiLMGa---RhYs~AvDiWSVGCIFaELLg 253 (449)
T KOG0664|consen 193 -------CILKICDFGLARTWDQRDRL---------NMTHEVVTQYYRAPELLMGA---RRYTGAVDIWSVGCIFAELLQ 253 (449)
T ss_pred -------ceEEecccccccccchhhhh---------hhHHHHHHHHhccHHHhhcc---hhhcCccceehhhHHHHHHHh
Confidence 89999999999864432211 01123568899999999984 578999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchh-----hhhhHHHHHHHHHHhcccCCCC
Q 001143 1045 LQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA-----ELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1045 Gk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
.+..|+..++.+..+.| .....|..+.....-.....+......+..+.+.. ......+...++..++.+||++
T Consensus 254 RrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dk 333 (449)
T KOG0664|consen 254 RKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDK 333 (449)
T ss_pred hhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcc
Confidence 99999988888877777 33344444322111100000000000000000000 0123345677889999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001143 1119 RPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~ 1132 (1141)
|.+.++.+.|++..
T Consensus 334 ris~~~A~~~~~~~ 347 (449)
T KOG0664|consen 334 RISVEEALQHRYLE 347 (449)
T ss_pred cccHhhhccccccc
Confidence 99999999998764
No 396
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.95 E-value=3.2e-28 Score=249.11 Aligned_cols=227 Identities=24% Similarity=0.374 Sum_probs=179.9
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~ 883 (1141)
-+++.-...||+|+||.|-+.++......++++++..+..... +.+.++|+.+..+. .+|.+|.|||.+....
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~-----q~r~L~dldi~~r~~~CPf~V~FyGa~~reg- 118 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQE-----QKRLLMDLDIIMRTVDCPFTVHFYGALFREG- 118 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHH-----HHHHHHhhhhhccCCCCCeEEEeehhhhccc-
Confidence 3456778899999999998888755555555555555443332 22347899887665 6999999999876544
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCCeeee
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENILID 962 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~NILld 962 (1141)
..+|.||.|+ .||..+-+.....+ ..+++..+-+|+..|+.||.|||++ .|||||+||+|||++
T Consensus 119 -------------dvwIcME~M~-tSldkfy~~v~~~g-~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn 183 (282)
T KOG0984|consen 119 -------------DVWICMELMD-TSLDKFYRKVLKKG-GTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILIN 183 (282)
T ss_pred -------------cEEEeHHHhh-hhHHHHHHHHHhcC-CcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEc
Confidence 3499999997 89988877765554 4799999999999999999999986 899999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ |+||+||||.+-.+.+.... ....|-..|||||.+........|+-|+||||||+.+.||
T Consensus 184 ~~-------GqVKiCDFGIsG~L~dSiAk-----------t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiEl 245 (282)
T KOG0984|consen 184 YD-------GQVKICDFGISGYLVDSIAK-----------TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEM 245 (282)
T ss_pred cC-------CcEEEcccccceeehhhhHH-----------HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhh
Confidence 98 89999999999776543211 1235788999999998777677899999999999999999
Q ss_pred HhCCCCCCC-CCHHHHHHHHHhCCCCCch
Q 001143 1043 LTLQVPYMG-LSELEIHDLIQMGKRPRLT 1070 (1141)
Q Consensus 1043 LTGk~Pf~~-~~~~el~~~I~~~~~p~l~ 1070 (1141)
.+++.||.. ..+.+...++.....|.++
T Consensus 246 A~lr~PY~~w~tpF~qLkqvVeep~P~Lp 274 (282)
T KOG0984|consen 246 AILRFPYESWGTPFQQLKQVVEEPSPQLP 274 (282)
T ss_pred hhccccccccCCHHHHHHHHhcCCCCCCc
Confidence 999999964 4667777777766666554
No 397
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=266.67 Aligned_cols=283 Identities=19% Similarity=0.224 Sum_probs=201.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|.-.+.+|.|+- .|-.|.+. +..|++| +...........+ +..+|...+..+.|+||++++.+|.-..
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ik--k~~~pf~n~~~ak----ra~rel~l~~~v~~~nii~l~n~ftP~~ 88 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIK--KLSRPFQNQTHAK----RAYRELKLMKCVNHKNIISLLNVFTPQK 88 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehh--hhcCccccCccch----hhhhhhhhhhhhcccceeeeeeccCccc
Confidence 346777888999998 67777764 4445544 3332222222222 2379999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ......|+||||+. .+|...+.- .++-..+..|++|++.|++|||+.||+||||||+||++.
T Consensus 89 ~l--------~~~~e~y~v~e~m~-~nl~~vi~~-------elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~ 152 (369)
T KOG0665|consen 89 TL--------EEFQEVYLVMELMD-ANLCQVILM-------ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVN 152 (369)
T ss_pred cH--------HHHHhHHHHHHhhh-hHHHHHHHH-------hcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceec
Confidence 32 22335699999997 899999874 478899999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||.|||+|+.-.... .-...+.|..|+|||++.+ ..|.+.+||||.||++.||
T Consensus 153 ~~-------~~lKi~dfg~ar~e~~~~-----------~mtpyVvtRyyrapevil~----~~~ke~vdiwSvGci~gEl 210 (369)
T KOG0665|consen 153 SD-------CTLKILDFGLARTEDTDF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGEL 210 (369)
T ss_pred ch-------hheeeccchhhcccCccc-----------ccCchhheeeccCchheec----cCCcccchhhhhhhHHHHH
Confidence 88 899999999997543321 1124568999999999998 3488999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHH-HhCCCCCch--hHHhhhccCcc--------ccccccCCCCCCch---hhhhhHHHHHHHH
Q 001143 1043 LTLQVPYMGLSELEIHDLI-QMGKRPRLT--DELEALGSCHE--------HEVAQSGSGFEKPE---AELETLSFLVDVF 1108 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I-~~~~~p~l~--~~l~~~~~~~~--------~~~~~~~~~~~~~~---~~~~~~~~L~dLI 1108 (1141)
++|+..|.+.+..+...++ .....|... ..+......+. ..+.........+. .+......+++++
T Consensus 211 i~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll 290 (369)
T KOG0665|consen 211 ILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLL 290 (369)
T ss_pred hhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHH
Confidence 9999999887665544433 333333321 11111100000 00000000000000 0113456789999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1109 RRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1109 ~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.+||..||++|.+++++|.|++++
T Consensus 291 ~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 291 SKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred HHhhccChhhcccHHHHhcCCeee
Confidence 999999999999999999999986
No 398
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=7e-29 Score=288.06 Aligned_cols=263 Identities=27% Similarity=0.394 Sum_probs=211.9
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
+-++|++.+++|.|+||.||+|++ .+..+|+|+.+++.. +..... ++|+-+++..+|||||.+++.+...
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~----dd~~~i----qqei~~~~dc~h~nivay~gsylr~ 84 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG----DDFSGI----QQEIGMLRDCRHPNIVAYFGSYLRR 84 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCC----cccccc----ccceeeeecCCCcChHHHHhhhhhh
Confidence 346799999999999999999998 567889999877643 333333 7899999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+.+ +++||||.||+|.+.-+- .+++++.++-...+..++||+|||++|-+|||||-.||++
T Consensus 85 dkl--------------wicMEycgggslQdiy~~-----TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanill 145 (829)
T KOG0576|consen 85 DKL--------------WICMEYCGGGSLQDIYHV-----TGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILL 145 (829)
T ss_pred cCc--------------EEEEEecCCCcccceeee-----cccchhHHHHHHHhhhhccchhhhcCCcccccccccceee
Confidence 543 999999999999987654 5689999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
++. +.+|+.|||.+..+.... .....+.||++|||||+-.- .+...|++.+||||+|+...|
T Consensus 146 td~-------gDvklaDfgvsaqitati----------~KrksfiGtpywmapEvaav-erkggynqlcdiwa~gitAie 207 (829)
T KOG0576|consen 146 TDE-------GDVKLADFGVSAQITATI----------AKRKSFIGTPYWMAPEVAAV-ERKGGYNQLCDIWALGITAIE 207 (829)
T ss_pred ccc-------CceeecccCchhhhhhhh----------hhhhcccCCccccchhHHHH-Hhcccccccccccccccchhh
Confidence 988 899999999987665422 12346789999999999643 334678999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
+..-++|.....+++....+....+.+... +. .....+.+.+|++.+|..+|++||+
T Consensus 208 l~eLqpplfdlhpmr~l~LmTkS~~qpp~l--------------kD---------k~kws~~fh~fvK~altknpKkRpt 264 (829)
T KOG0576|consen 208 LGELQPPLFDLHPMRALFLMTKSGFQPPTL--------------KD---------KTKWSEFFHNFVKGALTKNPKKRPT 264 (829)
T ss_pred hhhcCCcccccchHHHHHHhhccCCCCCcc--------------cC---------CccchHHHHHHHHHHhcCCCccCCC
Confidence 999999987777766655553322211110 00 0144567899999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
++.++.|++....
T Consensus 265 aeklL~h~fvs~~ 277 (829)
T KOG0576|consen 265 AEKLLQHPFVSQT 277 (829)
T ss_pred hhhheeceeeccc
Confidence 9999999877544
No 399
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=1.1e-26 Score=303.57 Aligned_cols=274 Identities=23% Similarity=0.261 Sum_probs=210.6
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcCCcE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLRN 95 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~L~~ 95 (1141)
..+..|.+..|++++..+. ..+++|++|||++|.+++.+|..++.+ ++|++|+|++|.++ .+|..|.++++|++
T Consensus 118 ~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~~p~~~~~l---~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 192 (968)
T PLN00113 118 SSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGEIPNDIGSF---SSLKVLDLGGNVLVGKIPNSLTNLTSLEF 192 (968)
T ss_pred CCCCEEECcCCccccccCc--cccCCCCEEECcCCcccccCChHHhcC---CCCCEEECccCcccccCChhhhhCcCCCe
Confidence 3677888888887754443 457788888888888888777766554 78888888888876 67777888888888
Q ss_pred EEccCCCCC-cCchhhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC
Q 001143 96 LKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1141)
Q Consensus 96 L~Ls~N~L~-~lP~~~~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1141)
|+|++|.++ .+|..++++++|+.|+|++|.+. .+|..+.++++|++|++++|.+ .+.+|..|+++++|+.|++++
T Consensus 193 L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l---~~~~p~~l~~l~~L~~L~L~~ 269 (968)
T PLN00113 193 LTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNL---TGPIPSSLGNLKNLQYLFLYQ 269 (968)
T ss_pred eeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCcee---ccccChhHhCCCCCCEEECcC
Confidence 888888887 66888888888888888888754 5677788888888888887543 445677788888888888888
Q ss_pred CCCC-ccCccccCCCCCCEEEccCCccc-cccccccCCCCCCEEEccCCCCC-cCCcCccCCCCCCEEeCCCCCCCCCCc
Q 001143 174 FSIR-YLPPEIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 174 N~L~-~iP~~l~~l~~L~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
|.++ .+|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|++++.+|
T Consensus 270 n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p 349 (968)
T PLN00113 270 NKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIP 349 (968)
T ss_pred CeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCC
Confidence 8877 56777788888888888888887 67777888888888888888886 567777788888888888888887777
Q ss_pred ccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcc
Q 001143 251 LDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 251 ~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
..+..+++|+.|+|++|++++ .+|.+++.......+.+..|.+.+..|
T Consensus 350 ~~l~~~~~L~~L~Ls~n~l~~--~~p~~~~~~~~L~~L~l~~n~l~~~~p 397 (968)
T PLN00113 350 KNLGKHNNLTVLDLSTNNLTG--EIPEGLCSSGNLFKLILFSNSLEGEIP 397 (968)
T ss_pred hHHhCCCCCcEEECCCCeeEe--eCChhHhCcCCCCEEECcCCEecccCC
Confidence 778888888888888888876 477777766666666677776665544
No 400
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.94 E-value=1.8e-26 Score=253.93 Aligned_cols=258 Identities=22% Similarity=0.322 Sum_probs=204.5
Q ss_pred CceEeeeecccCceEEEEEEECCc-------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGSA-------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~~-------~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
++++..++-+|.||.||+|.|... .+.+|. ++. ....-+.. +++.|.-.+..+.|||+..+.+...
T Consensus 285 Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKT--vk~-~AS~iQv~----~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 285 RVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKT--VKQ-HASQIQVN----LLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred heechhhhhcCchhheeeeeecccCCcchHHHHHHHH--HHh-cccHHHHH----HHHHHHHHHhcCcCCCccceeEEEe
Confidence 367778889999999999987432 233332 221 12222222 3488998999999999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhh---hcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLS---ETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~---~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
++.. ..++++.+..-|+|..+++.++ ......++..+...++.|++.|++|||++||||.||-+
T Consensus 358 e~~~-------------~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAa 424 (563)
T KOG1024|consen 358 EDYA-------------TPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAA 424 (563)
T ss_pred eccC-------------cceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhh
Confidence 6432 3488999998899999998543 22334577788899999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
.|.+|++. -.|||+|=.+++.+......+.. +.......||+||.+.. ..|+.++||||||
T Consensus 425 RNCvIdd~-------LqVkltDsaLSRDLFP~DYhcLG--------DnEnRPvkWMslEal~n----~~yssasDvWsfG 485 (563)
T KOG1024|consen 425 RNCVIDDQ-------LQVKLTDSALSRDLFPGDYHCLG--------DNENRPVKWMSLEALQN----SHYSSASDVWSFG 485 (563)
T ss_pred hcceehhh-------eeEEeccchhccccCcccccccC--------CCCCCcccccCHHHHhh----hhhcchhhhHHHH
Confidence 99999987 78999999999877655443321 11224567999999987 6799999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1037 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1037 viL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|++|||+| |+.||...++.++...+..|.+..-+ .++++++..++.-||..+
T Consensus 486 VllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP---------------------------~NCPDeLf~vMacCWall 538 (563)
T KOG1024|consen 486 VLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQP---------------------------FNCPDELFTVMACCWALL 538 (563)
T ss_pred HHHHHHHhcCCCCccccCHHHHHHHHhccceecCC---------------------------CCCcHHHHHHHHHHHhcC
Confidence 99999999 99999999999999888877653211 188999999999999999
Q ss_pred CCCCCCHHHHHHHHH
Q 001143 1116 PTERPTAGDLYEMFV 1130 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~ 1130 (1141)
|++||+++|+..-+-
T Consensus 539 peeRPsf~Qlv~cLs 553 (563)
T KOG1024|consen 539 PEERPSFSQLVICLS 553 (563)
T ss_pred cccCCCHHHHHHHHH
Confidence 999999999987663
No 401
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.94 E-value=1.7e-28 Score=280.59 Aligned_cols=267 Identities=25% Similarity=0.274 Sum_probs=170.3
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCC--CCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTV--DFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~L--s~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1141)
.++.|.++.|++..++ +-++.|+.|+.+++.+|+| +|++++. ..|..|+.||||+|+|+++|..+..-+++-+
T Consensus 56 kLEHLs~~HN~L~~vh-GELs~Lp~LRsv~~R~N~LKnsGiP~di----F~l~dLt~lDLShNqL~EvP~~LE~AKn~iV 130 (1255)
T KOG0444|consen 56 KLEHLSMAHNQLISVH-GELSDLPRLRSVIVRDNNLKNSGIPTDI----FRLKDLTILDLSHNQLREVPTNLEYAKNSIV 130 (1255)
T ss_pred hhhhhhhhhhhhHhhh-hhhccchhhHHHhhhccccccCCCCchh----cccccceeeecchhhhhhcchhhhhhcCcEE
Confidence 5677777788877775 5567777777777777766 3444432 2346777777777777777777777777777
Q ss_pred EEccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCC----------------------
Q 001143 96 LKFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPS---------------------- 152 (1141)
Q Consensus 96 L~Ls~N~L~~lP~~-~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~---------------------- 152 (1141)
|+||+|+|.+||.. |-+|+.|-.|+||+|++..+|+.+..|..|++|.|++|+++..
T Consensus 131 LNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRT 210 (1255)
T KOG0444|consen 131 LNLSYNNIETIPNSLFINLTDLLFLDLSNNRLEMLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRT 210 (1255)
T ss_pred EEcccCccccCCchHHHhhHhHhhhccccchhhhcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccch
Confidence 77777777777766 4567777777777777777777777777777777777664221
Q ss_pred cccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccc-----------------------cccccCC
Q 001143 153 VLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-----------------------PTEICYL 209 (1141)
Q Consensus 153 ~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~i-----------------------P~~l~~l 209 (1141)
...+|.++..|.+|..+||+.|.|..+|..+-++.+|+.|+||+|+|+.+ |++++.|
T Consensus 211 l~N~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL~~~~~~W~~lEtLNlSrNQLt~LP~avcKL 290 (1255)
T KOG0444|consen 211 LDNIPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITELNMTEGEWENLETLNLSRNQLTVLPDAVCKL 290 (1255)
T ss_pred hhcCCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeeeeccHHHHhhhhhhccccchhccchHHHhhh
Confidence 12245555566666666777777666666666666666665555555544 4444444
Q ss_pred CCCCEEEccCCCCC--cCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCC
Q 001143 210 KALISLKVANNKLV--ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNG 287 (1141)
Q Consensus 210 ~~L~~L~Ls~N~L~--~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~ 287 (1141)
+.|+.|.+.+|+|+ .||+.++.|.+|+.+.+++|+|.-+ |+.++.+..|+.|.|+.|+|.. +|..+..+.....
T Consensus 291 ~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElV-PEglcRC~kL~kL~L~~NrLiT---LPeaIHlL~~l~v 366 (1255)
T KOG0444|consen 291 TKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELV-PEGLCRCVKLQKLKLDHNRLIT---LPEAIHLLPDLKV 366 (1255)
T ss_pred HHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccccC-chhhhhhHHHHHhcccccceee---chhhhhhcCCcce
Confidence 45555555555444 4455555555555555555555433 3466666677777777777665 7777777777777
Q ss_pred CCCCCC
Q 001143 288 KDSSND 293 (1141)
Q Consensus 288 l~~~~n 293 (1141)
+++-.|
T Consensus 367 LDlreN 372 (1255)
T KOG0444|consen 367 LDLREN 372 (1255)
T ss_pred eeccCC
Confidence 776444
No 402
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.94 E-value=4.7e-27 Score=268.94 Aligned_cols=208 Identities=26% Similarity=0.368 Sum_probs=166.9
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChH---HHHHhHHhHHHHHHHHhhCC---CCCcccee
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSAD---EIRNFEYSCLGEVRMLGALR---HSCIVEMY 875 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~---~~~~~~~~~~~Ei~iL~~L~---HpNIVkll 875 (1141)
+..+.+|+..+.+|.|+||.|++|.++...+.|.+|.+.+...-.+ ..+.+ -.+-.|++||..++ |+||++++
T Consensus 557 ~~k~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkL-GtVp~EIqIla~l~~~sH~NIlKlL 635 (772)
T KOG1152|consen 557 YKKFSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKL-GTVPSEIQILATLNKHSHENILKLL 635 (772)
T ss_pred ecccccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhccccc-CccchhHHHHHHhhhcCccchhhhh
Confidence 5667889999999999999999999976554444443332211110 00110 12246999999996 99999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeec-cCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYV-KGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 954 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~-~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDL 954 (1141)
++|++++++ ||+||-- +|.+|+++|.. ...+++.+++.|++||+.|++|||++|||||||
T Consensus 636 dfFEddd~y--------------yl~te~hg~gIDLFd~IE~-----kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdi 696 (772)
T KOG1152|consen 636 DFFEDDDYY--------------YLETEVHGEGIDLFDFIEF-----KPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDI 696 (772)
T ss_pred heeecCCee--------------EEEecCCCCCcchhhhhhc-----cCccchHHHHHHHHHHHhccccccccCceeccc
Confidence 999988865 9999964 45699999986 457999999999999999999999999999999
Q ss_pred CCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001143 955 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1034 (1141)
Q Consensus 955 KP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWS 1034 (1141)
|-+|+.++.+ |-+||+|||.|...... +-+.++||..|.|||++.+. ...+..-||||
T Consensus 697 kdenvivd~~-------g~~klidfgsaa~~ksg------------pfd~f~gtv~~aapevl~g~---~y~gk~qdiwa 754 (772)
T KOG1152|consen 697 KDENVIVDSN-------GFVKLIDFGSAAYTKSG------------PFDVFVGTVDYAAPEVLGGE---KYLGKPQDIWA 754 (772)
T ss_pred ccccEEEecC-------CeEEEeeccchhhhcCC------------CcceeeeeccccchhhhCCC---ccCCCcchhhh
Confidence 9999999988 89999999998654331 12467899999999999873 45578899999
Q ss_pred HHHHHHHHHhCCCCCCC
Q 001143 1035 YGCLLLELLTLQVPYMG 1051 (1141)
Q Consensus 1035 LGviL~ELLTGk~Pf~~ 1051 (1141)
+|++||.++....||..
T Consensus 755 lgillytivykenpyyn 771 (772)
T KOG1152|consen 755 LGILLYTIVYKENPYYN 771 (772)
T ss_pred hhheeeEEEeccCCCcC
Confidence 99999999999999864
No 403
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.93 E-value=2.4e-26 Score=257.62 Aligned_cols=288 Identities=23% Similarity=0.319 Sum_probs=195.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeE
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK 878 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~ 878 (1141)
...|..+++||.|+|++||+|.+. ...+|+|- +..+.... ++..|+++|..+. +.||+++.+++
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~--i~~ts~p~--------ri~~El~~L~~~gG~~ni~~~~~~~ 104 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKA--IYRTSSPS--------RILNELEMLYRLGGSDNIIKLNGCF 104 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeee--cccccCch--------HHHHHHHHHHHhccchhhhcchhhh
Confidence 456899999999999999999863 34455554 44433322 2478999999995 99999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
...+ +..+||||++.....++... ++..+++.+++.++.||.|+|.+|||||||||+|
T Consensus 105 rnnd--------------~v~ivlp~~~H~~f~~l~~~--------l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsN 162 (418)
T KOG1167|consen 105 RNND--------------QVAIVLPYFEHDRFRDLYRS--------LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSN 162 (418)
T ss_pred ccCC--------------eeEEEecccCccCHHHHHhc--------CCHHHHHHHHHHHHHHhhhhhccCccccCCCccc
Confidence 7655 45999999998888888765 7889999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccc--ccc-c----------------------------cc---cCCCCCCCC
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFL--HTC-C----------------------------IA---HRGIPAPDV 1004 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~--~~~-~----------------------------~~---~~~~~~~~~ 1004 (1141)
+|.+... +.-.|+|||+|....... ..+ . .. .........
T Consensus 163 FL~n~~t------~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~an 236 (418)
T KOG1167|consen 163 FLYNRRT------QRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERAN 236 (418)
T ss_pred ccccccc------CCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecc
Confidence 9998764 567899999997211100 000 0 00 000111224
Q ss_pred ccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-HHH-HHHHH-------------HhCC----
Q 001143 1005 CVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLS-ELE-IHDLI-------------QMGK---- 1065 (1141)
Q Consensus 1005 ~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~-~~e-l~~~I-------------~~~~---- 1065 (1141)
..||++|+|||++... ..-++++||||.|||++-++++.+||.... ..+ +.+.+ ..+.
T Consensus 237 rAGT~GfRaPEvL~k~---~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~ 313 (418)
T KOG1167|consen 237 RAGTPGFRAPEVLFRC---PRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLW 313 (418)
T ss_pred cCCCCCCCchHHHhhc---cCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeee
Confidence 5799999999999874 345789999999999999999999986321 111 11111 1111
Q ss_pred ----CCCchhHHhhhccCccccccccCCC-CCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1066 ----RPRLTDELEALGSCHEHEVAQSGSG-FEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1066 ----~p~l~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.+.++..........-..+.+.... ..........+..+.+++.+|+..||.+|.||+++|+|+||..
T Consensus 314 ~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~ 386 (418)
T KOG1167|consen 314 QKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE 386 (418)
T ss_pred ccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence 0011110000000000000000000 1111122244558999999999999999999999999999963
No 404
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.93 E-value=1.9e-24 Score=226.31 Aligned_cols=212 Identities=33% Similarity=0.500 Sum_probs=173.1
Q ss_pred ecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 814 AGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 814 LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
||+|++|.||++... +..+++|++..... .. ..+ .+.+|+..++.++|++|+++++++....
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~--~~-~~~----~~~~e~~~~~~l~~~~i~~~~~~~~~~~--------- 64 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDS--SS-LLE----ELLREIEILKKLNHPNIVKLYGVFEDEN--------- 64 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccc--hh-HHH----HHHHHHHHHHhcCCCCeeeEeeeeecCC---------
Confidence 689999999999986 67788887653321 10 122 3479999999999999999999987643
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec-ccccCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL-ERKKADG 970 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~-~~~~~~~ 970 (1141)
..++||||+++++|.+++.... ..+++..+..++.+++.+++|||+.|++|+||+|.||+++. +
T Consensus 65 -----~~~~~~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~------ 129 (215)
T cd00180 65 -----HLYLVMEYCEGGSLKDLLKENE----GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDN------ 129 (215)
T ss_pred -----eEEEEEecCCCCcHHHHHHhcc----CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCC------
Confidence 4599999999999999987621 36899999999999999999999999999999999999988 5
Q ss_pred CCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 001143 971 KPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYM 1050 (1141)
Q Consensus 971 ~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~ 1050 (1141)
+.++|+|||.+........ ......+...|++||.+... ..++.+.|+|++|+++++|
T Consensus 130 -~~~~l~d~~~~~~~~~~~~----------~~~~~~~~~~~~~pe~~~~~---~~~~~~~D~~~lg~~~~~l-------- 187 (215)
T cd00180 130 -GKVKLADFGLSKLLTSDKS----------LLKTIVGTPAYMAPEVLLGK---GYYSEKSDIWSLGVILYEL-------- 187 (215)
T ss_pred -CcEEEecCCceEEccCCcc----------hhhcccCCCCccChhHhccc---CCCCchhhhHHHHHHHHHH--------
Confidence 6899999999876543210 01123478889999998752 2667899999999999998
Q ss_pred CCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 001143 1051 GLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF 1129 (1141)
Q Consensus 1051 ~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L 1129 (1141)
..+.+++..|+..||.+||++.++++++
T Consensus 188 ---------------------------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 188 ---------------------------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred ---------------------------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 0277889999999999999999999864
No 405
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.92 E-value=9.1e-27 Score=266.37 Aligned_cols=275 Identities=21% Similarity=0.217 Sum_probs=219.3
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRN 95 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~ 95 (1141)
+.++.+++..|.|+.|+...|..-.++++|+|++|.|+.+-...|..| .+|..|.|++|+|+++|. .|.+|++|+.
T Consensus 149 ~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~l---nsL~tlkLsrNrittLp~r~Fk~L~~L~~ 225 (873)
T KOG4194|consen 149 PALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSL---NSLLTLKLSRNRITTLPQRSFKRLPKLES 225 (873)
T ss_pred hhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccccccccccccc---chheeeecccCcccccCHHHhhhcchhhh
Confidence 367888899999999999999998999999999999988877666555 788999999999999986 4677999999
Q ss_pred EEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC
Q 001143 96 LKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1141)
Q Consensus 96 L~Ls~N~L~~l-P~~~~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1141)
|+|..|+|..+ --.|.+|.+|+.|.|..|.+..+. ..|..|.++++|+|..|++.... -+++.+|+.|+.|+|++
T Consensus 226 LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn---~g~lfgLt~L~~L~lS~ 302 (873)
T KOG4194|consen 226 LDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVN---EGWLFGLTSLEQLDLSY 302 (873)
T ss_pred hhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhh---cccccccchhhhhccch
Confidence 99999998866 345888999999999888866555 57888999999999986664333 24678888999999999
Q ss_pred CCCCcc-CccccCCCCCCEEEccCCcccccc-ccccCCCCCCEEEccCCCCCcCCc-CccCCCCCCEEeCCCCCCCCCCc
Q 001143 174 FSIRYL-PPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 174 N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
|.|..| +..+...++|.+|+|+.|+|+.+| .+|..|.+|+.|+|++|.++.|-. .|..+++|+.|||++|.|++.+.
T Consensus 303 NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IE 382 (873)
T KOG4194|consen 303 NAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIE 382 (873)
T ss_pred hhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEe
Confidence 999877 677788888999999999999885 567778889999999999988754 44458889999999998887775
Q ss_pred c---cccCCCCCCEEEccCCcCCCCCCCchh-hhhcccCCCCCCCCCCcccCcc
Q 001143 251 L---DLCLMHNLQNLNLQYNKLLSYCQVPSW-ICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 251 ~---~l~~L~~L~~L~Ls~N~L~~~~~iP~~-~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
+ .|..|++|+.|+|.||+|.. ||.- +..+-.+..+++.+|.+-..-+
T Consensus 383 Daa~~f~gl~~LrkL~l~gNqlk~---I~krAfsgl~~LE~LdL~~NaiaSIq~ 433 (873)
T KOG4194|consen 383 DAAVAFNGLPSLRKLRLTGNQLKS---IPKRAFSGLEALEHLDLGDNAIASIQP 433 (873)
T ss_pred cchhhhccchhhhheeecCceeee---cchhhhccCcccceecCCCCcceeecc
Confidence 4 37788889999999998886 5533 3345556677777777655433
No 406
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.92 E-value=9.9e-27 Score=266.10 Aligned_cols=275 Identities=20% Similarity=0.238 Sum_probs=232.0
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNL 96 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L 96 (1141)
.+++|.+..|.|+.+....++-++.|+.||||.|.|+.+...+|..- .+|++|+|++|+||++-. .|.+|.+|..|
T Consensus 126 hl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~---~ni~~L~La~N~It~l~~~~F~~lnsL~tl 202 (873)
T KOG4194|consen 126 HLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAK---VNIKKLNLASNRITTLETGHFDSLNSLLTL 202 (873)
T ss_pred ceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCC---CCceEEeeccccccccccccccccchheee
Confidence 58889999999999999999999999999999999998877766543 689999999999998854 69999999999
Q ss_pred EccCCCCCcCchh-hcCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCC
Q 001143 97 KFFGNEINLFPSE-VGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1141)
Q Consensus 97 ~Ls~N~L~~lP~~-~~~L~~L~~L~Ls~N~l~~~-~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1141)
.|++|.|+++|.- |.+|++|+.|+|..|++... +..|.+|.+|+.|.|..|.+..+.- +.|..|..+++|+|..|
T Consensus 203 kLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~D---G~Fy~l~kme~l~L~~N 279 (873)
T KOG4194|consen 203 KLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDD---GAFYGLEKMEHLNLETN 279 (873)
T ss_pred ecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccC---cceeeecccceeecccc
Confidence 9999999999765 77799999999999998887 6789999999999999977765543 36888999999999999
Q ss_pred CCCccCc-cccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCC-cCccCCCCCCEEeCCCCCCCCCCcc
Q 001143 175 SIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELP-SGLYLLQRLENLDLSNNRLTSLGSL 251 (1141)
Q Consensus 175 ~L~~iP~-~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP-~~l~~L~~L~~L~Ls~N~Lt~~~p~ 251 (1141)
+++.+-. ++.+|+.|+.|+||.|.|..| ++++...++|++|+|++|+|+++| .+|..|..|+.|+|++|+++.+-..
T Consensus 280 ~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~ 359 (873)
T KOG4194|consen 280 RLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEG 359 (873)
T ss_pred hhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhh
Confidence 9998844 678999999999999999977 577888899999999999999985 5666799999999999999999988
Q ss_pred cccCCCCCCEEEccCCcCCCCC-CCchhhhhcccCCCCCCCCCCcccC
Q 001143 252 DLCLMHNLQNLNLQYNKLLSYC-QVPSWICCNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 252 ~l~~L~~L~~L~Ls~N~L~~~~-~iP~~~~~~l~~~~l~~~~n~l~~~ 298 (1141)
.|..+++|+.|||++|.|+.-. +-...+..+.+++.+.+.+|++...
T Consensus 360 af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I 407 (873)
T KOG4194|consen 360 AFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSI 407 (873)
T ss_pred HHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeec
Confidence 9999999999999999987621 1222333455666677777766543
No 407
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.92 E-value=6.6e-24 Score=227.08 Aligned_cols=216 Identities=32% Similarity=0.438 Sum_probs=170.5
Q ss_pred ceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|++.+.||.|++|.||++...+ ..+++|+...... . ...+ .+.+|++.+.+++|+|++++++++....
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~-~~~~----~~~~e~~~~~~~~~~~i~~~~~~~~~~~--- 70 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKT--E-KQRE----EFLREIRILKKLKHPNIVKLYGVFEDPE--- 70 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccc--h-HHHH----HHHHHHHHHHhCCCCChhhheeeeecCC---
Confidence 6788999999999999999854 6677777543321 1 1223 3478999999999999999999987654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKH-VSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~-Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..+++|||+++++|.+++... .. +++..+..++.|++.++.|||+++++|+||+|+||+++.+
T Consensus 71 -----------~~~~v~e~~~~~~L~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~ 134 (225)
T smart00221 71 -----------PLYLVMEYCEGGDLFDYLRKK-----GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMD 134 (225)
T ss_pred -----------ceEEEEeccCCCCHHHHHHhc-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCC
Confidence 349999999988999999762 23 8899999999999999999999999999999999999887
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.++|+|||.+........ .......++..|++||.+. ....++.++|||+||+++++|++
T Consensus 135 -------~~~~l~d~g~~~~~~~~~~---------~~~~~~~~~~~~~~pe~~~---~~~~~~~~~Dv~~lG~~~~~l~~ 195 (225)
T smart00221 135 -------GLVKLADFGLARFIHRDLA---------ALLKTVKGTPFYLAPEVLL---GGKGYGEAVDIWSLGVILYELLW 195 (225)
T ss_pred -------CCEEEeeCceeeEecCccc---------ccccceeccCCcCCHhHhc---CCCCCCchhhHHHHHHHHHHHHH
Confidence 7899999999876543210 0112345788899999984 12567789999999999999999
Q ss_pred CCCCCCC-CCH-HHHHHHHHhCCCCC
Q 001143 1045 LQVPYMG-LSE-LEIHDLIQMGKRPR 1068 (1141)
Q Consensus 1045 Gk~Pf~~-~~~-~el~~~I~~~~~p~ 1068 (1141)
|+.||.. ... .++.+.+..+..+.
T Consensus 196 g~~pf~~~~~~~~~~~~~~~~~~~~~ 221 (225)
T smart00221 196 GPEPFSGEGEFTSLLSDVWSFGVPLL 221 (225)
T ss_pred CCCCccccchhHHHHHHHHhcCCccc
Confidence 9999976 333 35667776665443
No 408
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-25 Score=236.81 Aligned_cols=258 Identities=19% Similarity=0.258 Sum_probs=187.0
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeee-EecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGH-KISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~-~~~~~~ 883 (1141)
+.|.+.+.||+|.||.+-+|.++++...+.++.+.. .....++| .+|...--.|. |.||+..|+. |+..+.
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~---p~tt~~dF----~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~ 96 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR---PQTTQADF----VREFHYSFFLSPHQHIIDTYEVAFQTSDA 96 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc---chhhHHHH----HHHhccceeeccchhhhHHHHHHhhcCce
Confidence 359999999999999999999987665555554443 34445566 78887766774 9999998877 443443
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++|||++.|+|.+-+.. ..+.+...++++.|+++|+.|+|++++||||||.+||||-.
T Consensus 97 --------------YvF~qE~aP~gdL~snv~~------~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~ 156 (378)
T KOG1345|consen 97 --------------YVFVQEFAPRGDLRSNVEA------AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFD 156 (378)
T ss_pred --------------EEEeeccCccchhhhhcCc------ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEec
Confidence 3899999999999988764 35888999999999999999999999999999999999854
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC-CCCCchhhHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP-NLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~-~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ -..|||||||..+..+..... .-.+..|.|||........ -...+.+|||.||+++|..
T Consensus 157 ~d-----f~rvKlcDFG~t~k~g~tV~~-------------~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~c 218 (378)
T KOG1345|consen 157 AD-----FYRVKLCDFGLTRKVGTTVKY-------------LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYC 218 (378)
T ss_pred CC-----ccEEEeeecccccccCceehh-------------hhhhcccCCcHHHhhccccceEecccccchheeeeeeee
Confidence 31 158999999998765432211 1245679999987643211 2346889999999999999
Q ss_pred HhCCCCCCCCCHHH----HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1043 LTLQVPYMGLSELE----IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~e----l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+||+.||+....++ -..+...+..+..+..+. ..++.+..+.++-|..+|++
T Consensus 219 ltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~------------------------~fs~~a~r~Fkk~lt~~~~d 274 (378)
T KOG1345|consen 219 LTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFN------------------------PFSEKALRLFKKSLTPRFKD 274 (378)
T ss_pred ecCCCcchhhhccCchHHHHHHHhcccCccCchhhc------------------------ccCHHHHHHHHHhcCCcccc
Confidence 99999998432221 112223333333332221 33455777888999999999
Q ss_pred C---CCHHHHHHHHHhh
Q 001143 1119 R---PTAGDLYEMFVAR 1132 (1141)
Q Consensus 1119 R---PSa~ElL~~L~~~ 1132 (1141)
| .++......+|..
T Consensus 275 rcki~~~kk~rk~~w~E 291 (378)
T KOG1345|consen 275 RCKIWTAKKMRKCLWKE 291 (378)
T ss_pred cchhHHHHHHHHHHHHH
Confidence 9 5666666666664
No 409
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.91 E-value=6.6e-25 Score=280.62 Aligned_cols=225 Identities=12% Similarity=0.130 Sum_probs=149.2
Q ss_pred hhCCC-CCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 001143 864 GALRH-SCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALV 942 (1141)
Q Consensus 864 ~~L~H-pNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~ 942 (1141)
+.++| +||++++++|..... ++ ......+++|||+. ++|.+++.. ....+++.+++.|++||+.||.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~e~~~-~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~ 94 (793)
T PLN00181 27 KSLSHIDYVRSLLGSHKEGNL----DG---LDDDSIVRALECED-VSLRQWLDN----PDRSVDAFECFHVFRQIVEIVN 94 (793)
T ss_pred chhhHHHHHHHhhcccCCccc----cc---cccchhhhhhccCC-ccHHHHHhc----ccccccHHHHHHHHHHHHHHHH
Confidence 34556 688888888743221 11 11123578899884 799999974 2346999999999999999999
Q ss_pred HHHHCCccccCCCCCCeeeeccccc------------CCCCCeEEEeeccccccccccccc---cccccCCC---CCCCC
Q 001143 943 ELHSKHIMHRDIKSENILIDLERKK------------ADGKPVVKLCDFDRAVPLRSFLHT---CCIAHRGI---PAPDV 1004 (1141)
Q Consensus 943 yLHs~gIvHrDLKP~NILld~~~~~------------~~~~~~vKL~DFGlA~~l~~~~~~---~~~~~~~~---~~~~~ 1004 (1141)
|||++||+||||||+||||+..+.. ....+.+|++|||+++........ ......+. .....
T Consensus 95 ~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (793)
T PLN00181 95 AAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQIL 174 (793)
T ss_pred HHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccc
Confidence 9999999999999999999653100 011245677777777542210000 00000000 01112
Q ss_pred ccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccc
Q 001143 1005 CVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEV 1084 (1141)
Q Consensus 1005 ~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~ 1084 (1141)
..||+.|||||++.+ ..++.++|||||||+||||++|..|+... ......+.....+..
T Consensus 175 ~~gt~~Y~APE~~~~----~~~~~~sDVwSlGviL~ELl~~~~~~~~~--~~~~~~~~~~~~~~~--------------- 233 (793)
T PLN00181 175 AMEMSWYTSPEEDNG----SSSNCASDVYRLGVLLFELFCPVSSREEK--SRTMSSLRHRVLPPQ--------------- 233 (793)
T ss_pred cCCCcceEChhhhcc----CCCCchhhhhhHHHHHHHHhhCCCchhhH--HHHHHHHHHhhcChh---------------
Confidence 468999999999876 56789999999999999999998886532 112222211111100
Q ss_pred cccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1085 AQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1085 ~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.........+++.+||++||.+||++.|+++|+|+..
T Consensus 234 ------------~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~ 270 (793)
T PLN00181 234 ------------ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE 270 (793)
T ss_pred ------------hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence 0011233567889999999999999999999999864
No 410
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.90 E-value=1.3e-25 Score=257.11 Aligned_cols=160 Identities=28% Similarity=0.341 Sum_probs=127.6
Q ss_pred CchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccC
Q 001143 106 FPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGC 185 (1141)
Q Consensus 106 lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~ 185 (1141)
||.++..|.+|..++||.|.+..+|..+.++.+|+.|+||+|.+..+ .-..+.+.+|+.|+|+.|+|+.+|..+..
T Consensus 214 ~Ptsld~l~NL~dvDlS~N~Lp~vPecly~l~~LrrLNLS~N~iteL----~~~~~~W~~lEtLNlSrNQLt~LP~avcK 289 (1255)
T KOG0444|consen 214 IPTSLDDLHNLRDVDLSENNLPIVPECLYKLRNLRRLNLSGNKITEL----NMTEGEWENLETLNLSRNQLTVLPDAVCK 289 (1255)
T ss_pred CCCchhhhhhhhhccccccCCCcchHHHhhhhhhheeccCcCceeee----eccHHHHhhhhhhccccchhccchHHHhh
Confidence 44444555555555555555555666666666666666666544322 22344456778888888888889999999
Q ss_pred CCCCCEEEccCCccc--cccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEE
Q 001143 186 LSNLEQLDLSFNKMK--YLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLN 263 (1141)
Q Consensus 186 l~~L~~L~Ls~N~L~--~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~ 263 (1141)
|+.|+.|++.+|+|+ .||+.||.|.+|+.+..++|+|.-+|.++..|..|+.|.|++|+|-.+| +.+.-|+.|+.||
T Consensus 290 L~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LElVPEglcRC~kL~kL~L~~NrLiTLP-eaIHlL~~l~vLD 368 (1255)
T KOG0444|consen 290 LTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLELVPEGLCRCVKLQKLKLDHNRLITLP-EAIHLLPDLKVLD 368 (1255)
T ss_pred hHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccccCchhhhhhHHHHHhcccccceeech-hhhhhcCCcceee
Confidence 999999999999988 8999999999999999999999999999999999999999999998886 4899999999999
Q ss_pred ccCCcCC
Q 001143 264 LQYNKLL 270 (1141)
Q Consensus 264 Ls~N~L~ 270 (1141)
|..|+=-
T Consensus 369 lreNpnL 375 (1255)
T KOG0444|consen 369 LRENPNL 375 (1255)
T ss_pred ccCCcCc
Confidence 9999743
No 411
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.89 E-value=5e-23 Score=214.16 Aligned_cols=168 Identities=24% Similarity=0.307 Sum_probs=126.4
Q ss_pred CCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccc
Q 001143 908 GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRS 987 (1141)
Q Consensus 908 gSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~ 987 (1141)
|+|.++++.. ...+++.+++.|+.||+.||.|||+++ ||+|||++.+ +.+|+ ||.+.....
T Consensus 1 GsL~~~l~~~----~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~-------~~~~~--fG~~~~~~~ 61 (176)
T smart00750 1 VSLADILEVR----GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWD-------GLLKL--DGSVAFKTP 61 (176)
T ss_pred CcHHHHHHHh----CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCc-------cceee--ccceEeecc
Confidence 6899999751 346999999999999999999999998 9999999887 77888 999865432
Q ss_pred cccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCC
Q 001143 988 FLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSEL-EIHDLIQMGKR 1066 (1141)
Q Consensus 988 ~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~-el~~~I~~~~~ 1066 (1141)
. ...||+.|+|||++.+ ..++.++|||||||++|||++|+.||...... .....+.....
T Consensus 62 ~---------------~~~g~~~y~aPE~~~~----~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~ 122 (176)
T smart00750 62 E---------------QSRVDPYFMAPEVIQG----QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMP 122 (176)
T ss_pred c---------------cCCCcccccChHHhcC----CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhc
Confidence 1 1248899999999976 56789999999999999999999999754322 22222222111
Q ss_pred CCchhHHhhhccCccccccccCCCCCCchhhhhhHH--HHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1067 PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS--FLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1067 p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
+..+.. .+ ....... .+.+++.+||..||.+||++.|+++|++....
T Consensus 123 ~~~~~~--------------------~~-~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 123 ADDPRD--------------------RS-NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFA 171 (176)
T ss_pred cCCccc--------------------cc-cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 110000 00 0012222 68999999999999999999999999998754
No 412
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.89 E-value=5e-26 Score=251.46 Aligned_cols=242 Identities=27% Similarity=0.366 Sum_probs=116.9
Q ss_pred cccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEc
Q 001143 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKF 98 (1141)
Q Consensus 19 l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~L 98 (1141)
++++.+..|.+..+. .++.++..|++|++++|+++..+|+ ++ .+..++.|+.++|++.++|+++.++.+|..|++
T Consensus 47 l~~lils~N~l~~l~-~dl~nL~~l~vl~~~~n~l~~lp~a-ig---~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~~ 121 (565)
T KOG0472|consen 47 LQKLILSHNDLEVLR-EDLKNLACLTVLNVHDNKLSQLPAA-IG---ELEALKSLNVSHNKLSELPEQIGSLISLVKLDC 121 (565)
T ss_pred hhhhhhccCchhhcc-HhhhcccceeEEEeccchhhhCCHH-HH---HHHHHHHhhcccchHhhccHHHhhhhhhhhhhc
Confidence 344444455555443 2344555555555555555544332 22 224555555555555555555555555555555
Q ss_pred cCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc
Q 001143 99 FGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1141)
Q Consensus 99 s~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1141)
++|.+.++|++++.+..|..|+..+|++...|..+.++.+|..|++.+|.+ ..+|+..-+++.|++|++.+|-++.
T Consensus 122 s~n~~~el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l----~~l~~~~i~m~~L~~ld~~~N~L~t 197 (565)
T KOG0472|consen 122 SSNELKELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKL----KALPENHIAMKRLKHLDCNSNLLET 197 (565)
T ss_pred cccceeecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccch----hhCCHHHHHHHHHHhcccchhhhhc
Confidence 555555555555555555555555555555555555555555555554322 1222222224444444555555444
Q ss_pred cCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCcc-CCCCCCEEeCCCCCCCCCCcccccCCC
Q 001143 179 LPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLY-LLQRLENLDLSNNRLTSLGSLDLCLMH 257 (1141)
Q Consensus 179 iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~-~L~~L~~L~Ls~N~Lt~~~p~~l~~L~ 257 (1141)
+|++++.|.+|.-|||.+|+|..+| +|..+..|.+|+++.|+|..+|.+.. +|.+|..|||..|+|+..|. .++-|.
T Consensus 198 lP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pd-e~clLr 275 (565)
T KOG0472|consen 198 LPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPD-EICLLR 275 (565)
T ss_pred CChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCch-HHHHhh
Confidence 4444444445555555555554444 44444444444444444444444444 34444444444444444432 444444
Q ss_pred CCCEEEccCCcCCC
Q 001143 258 NLQNLNLQYNKLLS 271 (1141)
Q Consensus 258 ~L~~L~Ls~N~L~~ 271 (1141)
+|..||+|+|.+++
T Consensus 276 sL~rLDlSNN~is~ 289 (565)
T KOG0472|consen 276 SLERLDLSNNDISS 289 (565)
T ss_pred hhhhhcccCCcccc
Confidence 44444444444444
No 413
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.87 E-value=3.9e-24 Score=236.76 Aligned_cols=272 Identities=22% Similarity=0.270 Sum_probs=222.0
Q ss_pred cCCCCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeec-CCCCccCc-cccC
Q 001143 12 KSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYK-NVLNLIPK-SVGR 89 (1141)
Q Consensus 12 ~~~~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~-N~Lt~iP~-~l~~ 89 (1141)
+.+-|+.+..|.++.|+|+.|++++|+.+++|+.||||+|+|+.+-|..|.. |.+|..|-|.+ |+|+.||+ .|.+
T Consensus 62 P~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~G---L~~l~~Lvlyg~NkI~~l~k~~F~g 138 (498)
T KOG4237|consen 62 PANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKG---LASLLSLVLYGNNKITDLPKGAFGG 138 (498)
T ss_pred cccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhh---hHhhhHHHhhcCCchhhhhhhHhhh
Confidence 4445566999999999999999999999999999999999999999987754 47777776655 99999997 5999
Q ss_pred CcCCcEEEccCCCCCcCc-hhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCC---C------Ccccchh
Q 001143 90 YEKLRNLKFFGNEINLFP-SEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPR---P------SVLTLLS 158 (1141)
Q Consensus 90 L~~L~~L~Ls~N~L~~lP-~~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln---~------~~~~lp~ 158 (1141)
|..|+.|.|.-|+|..++ +.|..|++|..|.|..|.+..++. +|..+..++.+.+..|++- + .....|.
T Consensus 139 L~slqrLllNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~i 218 (498)
T KOG4237|consen 139 LSSLQRLLLNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPI 218 (498)
T ss_pred HHHHHHHhcChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchh
Confidence 999999999999999775 558899999999999999888886 8999999999999988721 0 1111222
Q ss_pred hhcCCCCCcEEEcc--------------------------CCCCCccCc-cccCCCCCCEEEccCCccccc-cccccCCC
Q 001143 159 EIAGLKCLTKLSVC--------------------------HFSIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLK 210 (1141)
Q Consensus 159 ~l~~L~~L~~L~Ls--------------------------~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~ 210 (1141)
.+++.....-..+. .+....-|. .|..|++|+.|+|++|+|+.| +.+|..+.
T Consensus 219 etsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a 298 (498)
T KOG4237|consen 219 ETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAA 298 (498)
T ss_pred hcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchh
Confidence 33332222222222 222222344 578999999999999999988 67888999
Q ss_pred CCCEEEccCCCCCcCCcCcc-CCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCC
Q 001143 211 ALISLKVANNKLVELPSGLY-LLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGN 286 (1141)
Q Consensus 211 ~L~~L~Ls~N~L~~IP~~l~-~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~ 286 (1141)
.|+.|.|..|+|..+-..++ ++..|+.|+|.+|+|+.+.|..|..+.+|..|+|-.|+|.|.|.+-+.-.|+....
T Consensus 299 ~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~ 375 (498)
T KOG4237|consen 299 ELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKS 375 (498)
T ss_pred hhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCC
Confidence 99999999999998865544 59999999999999999999999999999999999999999999987777776665
No 414
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.87 E-value=6.8e-25 Score=242.53 Aligned_cols=249 Identities=24% Similarity=0.284 Sum_probs=232.5
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEE
Q 001143 41 DDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQ 120 (1141)
Q Consensus 41 ~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~ 120 (1141)
..|+.|+|++|.++...++ +.+|..|++|++.+|+++++|++++.+..++.|+.++|+++.+|+.++.+.+|..|+
T Consensus 45 v~l~~lils~N~l~~l~~d----l~nL~~l~vl~~~~n~l~~lp~aig~l~~l~~l~vs~n~ls~lp~~i~s~~~l~~l~ 120 (565)
T KOG0472|consen 45 VDLQKLILSHNDLEVLRED----LKNLACLTVLNVHDNKLSQLPAAIGELEALKSLNVSHNKLSELPEQIGSLISLVKLD 120 (565)
T ss_pred cchhhhhhccCchhhccHh----hhcccceeEEEeccchhhhCCHHHHHHHHHHHhhcccchHhhccHHHhhhhhhhhhh
Confidence 3788999999999877665 345589999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccc
Q 001143 121 IKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMK 200 (1141)
Q Consensus 121 Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~ 200 (1141)
+++|.+..+++.++.+..|..|+..+|++ .++|+.+..+..|..|++.+|.+..+|+..-+|+.|+.|++.+|.++
T Consensus 121 ~s~n~~~el~~~i~~~~~l~dl~~~~N~i----~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~ 196 (565)
T KOG0472|consen 121 CSSNELKELPDSIGRLLDLEDLDATNNQI----SSLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE 196 (565)
T ss_pred ccccceeecCchHHHHhhhhhhhcccccc----ccCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh
Confidence 99999999999999999999999998544 57888899999999999999999999998877999999999999999
Q ss_pred cccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhh
Q 001143 201 YLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWIC 280 (1141)
Q Consensus 201 ~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1141)
++|+.++.+.+|.-|+|.+|+|..+| +|..+..|..|+++.|+|+-++.+....|++|..|||.+|+++. +|+.+|
T Consensus 197 tlP~~lg~l~~L~~LyL~~Nki~~lP-ef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke---~Pde~c 272 (565)
T KOG0472|consen 197 TLPPELGGLESLELLYLRRNKIRFLP-EFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKE---VPDEIC 272 (565)
T ss_pred cCChhhcchhhhHHHHhhhcccccCC-CCCccHHHHHHHhcccHHHhhHHHHhcccccceeeecccccccc---CchHHH
Confidence 99999999999999999999999999 89999999999999999999988777799999999999999997 999999
Q ss_pred hcccCCCCCCCCCCcccCccc
Q 001143 281 CNLEGNGKDSSNDDFISSSAE 301 (1141)
Q Consensus 281 ~~l~~~~l~~~~n~l~~~~~~ 301 (1141)
...+.+.+++++|.+.+-.+.
T Consensus 273 lLrsL~rLDlSNN~is~Lp~s 293 (565)
T KOG0472|consen 273 LLRSLERLDLSNNDISSLPYS 293 (565)
T ss_pred HhhhhhhhcccCCccccCCcc
Confidence 999999999999999887664
No 415
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=1.6e-20 Score=215.78 Aligned_cols=269 Identities=22% Similarity=0.222 Sum_probs=188.7
Q ss_pred CceEeeeecccCceEEEEEEECCc---cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC----CCccceeeeEe
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGSA---DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH----SCIVEMYGHKI 879 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~~---~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H----pNIVkllg~~~ 879 (1141)
.|.+.++||+|+||.||+|.+... .+|+|+.......... . +..|+.++..+.. +++..+++.+.
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~----~----l~~E~~vl~~l~~~~~~~~~~~~~~~G~ 90 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS----V----LKIEIQVLKKLEKKNGPSHFPKLLDHGR 90 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc----c----chhHHHHHHHHhhhcCCCCCCEEEEecc
Confidence 899999999999999999998554 5788875533221111 1 2568888888762 68888888874
Q ss_pred -cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 880 -SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 880 -~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
... ..++||+.+ |.+|.++.... +...++..++.+|+.|++.+|++||+.|++||||||.|
T Consensus 91 ~~~~--------------~~~iVM~l~-G~sL~dl~~~~---~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N 152 (322)
T KOG1164|consen 91 STED--------------FNFIVMSLL-GPSLEDLRKRN---PPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPEN 152 (322)
T ss_pred CCCc--------------eeEEEEecc-CccHHHHHHhC---CCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHH
Confidence 333 239999998 79999987652 24679999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCC-CCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGI-PAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~-~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
+++..... .....+.|.|||+|+........... .+.. .....+.||..|+++.+..+ ...+.+.|+||++.
T Consensus 153 ~~~g~~~~--~~~~~~~llDfGlar~~~~~~~~~~~-~~~~r~~~~~~rGT~ry~S~~~H~~----~e~~r~DDles~~Y 225 (322)
T KOG1164|consen 153 FVVGQSSR--SEVRTLYLLDFGLARRFKYVGDSGGN-LRPPRPQKGLFRGTLRYASINVHLG----IEQGRRDDLESLFY 225 (322)
T ss_pred eeecCCCC--cccceEEEEecCCCccccccCCCCcc-cccCCCCccCCCCccccccHHHhCC----CccCCchhhhhHHH
Confidence 99976520 11146999999999843321111100 1111 11345669999999999887 56789999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1038 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
++.++..|..||.+.........+........... .....+.++.++...+-..+..
T Consensus 226 ~l~el~~g~LPW~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~ 282 (322)
T KOG1164|consen 226 MLLELLKGSLPWEALEMTDLKSKFEKDPRKLLTDR-----------------------FGDLKPEEFAKILEYIDSLDYE 282 (322)
T ss_pred HHHHHhcCCCCCccccccchHHHHHHHhhhhcccc-----------------------ccCCChHHHHHHHHHhhccCCc
Confidence 99999999999976543222222211110000000 0013345567777777778999
Q ss_pred CCCCHHHHHHHHHh
Q 001143 1118 ERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~ 1131 (1141)
.+|....+...+..
T Consensus 283 ~~Pdy~~~~~~l~~ 296 (322)
T KOG1164|consen 283 DKPDYEKLAELLKD 296 (322)
T ss_pred CCCCHHHHHHHHHH
Confidence 99999988877544
No 416
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.86 E-value=4e-21 Score=238.31 Aligned_cols=200 Identities=25% Similarity=0.221 Sum_probs=98.3
Q ss_pred CccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001143 69 SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1141)
Q Consensus 69 ~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ 148 (1141)
+|+.|+|++|.|+.+|..+ ++|+.|+|++|+|+.+|.. +++|+.|+|++|++..+|..+ .+|+.|++++|.
T Consensus 263 sL~~L~Ls~N~L~~Lp~lp---~~L~~L~Ls~N~Lt~LP~~---p~~L~~LdLS~N~L~~Lp~lp---~~L~~L~Ls~N~ 333 (788)
T PRK15387 263 GLLELSIFSNPLTHLPALP---SGLCKLWIFGNQLTSLPVL---PPGLQELSVSDNQLASLPALP---SELCKLWAYNNQ 333 (788)
T ss_pred ccceeeccCCchhhhhhch---hhcCEEECcCCcccccccc---ccccceeECCCCccccCCCCc---ccccccccccCc
Confidence 3444444444444444311 2344444555554444432 234555555555544444322 234444444433
Q ss_pred CCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcC
Q 001143 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSG 228 (1141)
Q Consensus 149 ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~ 228 (1141)
+.. +|.. ..+|+.|+|++|+|+.+|.. ..+|+.|++++|+|+.||... .+|+.|+|++|+|+.+|..
T Consensus 334 L~~----LP~l---p~~Lq~LdLS~N~Ls~LP~l---p~~L~~L~Ls~N~L~~LP~l~---~~L~~LdLs~N~Lt~LP~l 400 (788)
T PRK15387 334 LTS----LPTL---PSGLQELSVSDNQLASLPTL---PSELYKLWAYNNRLTSLPALP---SGLKELIVSGNRLTSLPVL 400 (788)
T ss_pred ccc----cccc---ccccceEecCCCccCCCCCC---CcccceehhhccccccCcccc---cccceEEecCCcccCCCCc
Confidence 321 2210 12455566666666655542 234555556666665555422 3456666666666655543
Q ss_pred ccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcc
Q 001143 229 LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 229 l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
. ++|+.|+|++|+|+++|. . ..+|+.|+|++|+|+. ||..++.+.....+++++|.|.+..+
T Consensus 401 ~---s~L~~LdLS~N~LssIP~-l---~~~L~~L~Ls~NqLt~---LP~sl~~L~~L~~LdLs~N~Ls~~~~ 462 (788)
T PRK15387 401 P---SELKELMVSGNRLTSLPM-L---PSGLLSLSVYRNQLTR---LPESLIHLSSETTVNLEGNPLSERTL 462 (788)
T ss_pred c---cCCCEEEccCCcCCCCCc-c---hhhhhhhhhccCcccc---cChHHhhccCCCeEECCCCCCCchHH
Confidence 2 345666666666665432 1 2345556666666653 56655555555566666666655443
No 417
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.85 E-value=1.2e-19 Score=200.71 Aligned_cols=272 Identities=31% Similarity=0.402 Sum_probs=196.3
Q ss_pred ceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCC-CccceeeeEecCCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS-CIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp-NIVkllg~~~~~~~~~~ 886 (1141)
|.+.+.||.|+||.||++.+. ..+++|+...... ... .....+.+|+.++..+.|+ +|+++++.+....
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~--~~~---~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~---- 71 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR-KLVALKVLAKKLE--SKS---KEVERFLREIQILASLNHPPNIVKLYDFFQDEG---- 71 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec-cEEEEEeechhhc--cch---hHHHHHHHHHHHHHHccCCcceeeEEEEEecCC----
Confidence 788999999999999999988 5667776543322 111 1233448999999999977 7999999995433
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
..+++++|+.++++.+++...... ..++...+..++.|++.++.|+|+.+++|||+||+||+++..
T Consensus 72 ----------~~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~-- 137 (384)
T COG0515 72 ----------SLYLVMEYVDGGSLEDLLKKIGRK--GPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRD-- 137 (384)
T ss_pred ----------EEEEEEecCCCCcHHHHHHhcccc--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCC--
Confidence 259999999999999777652111 268999999999999999999999999999999999999876
Q ss_pred cCCCCC-eEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 967 KADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 967 ~~~~~~-~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
. .++++|||.+............ ........||..|+|||.+.+.. ...+....|+||+|++++++++|
T Consensus 138 -----~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~~t~~~~~pe~~~~~~-~~~~~~~~D~~s~g~~~~~~~~~ 207 (384)
T COG0515 138 -----GRVVKLIDFGLAKLLPDPGSTSSI----PALPSTSVGTPGYMAPEVLLGLS-LAYASSSSDIWSLGITLYELLTG 207 (384)
T ss_pred -----CCeEEEeccCcceecCCCCccccc----cccccccccccccCCHHHhcCCC-CCCCCchHhHHHHHHHHHHHHhC
Confidence 4 6999999999754432211000 01224567999999999987521 03567899999999999999999
Q ss_pred CCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1046 QVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1046 k~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
..||..... .+....+.....+........ . .. ......+.+++..|+..+|..|.+
T Consensus 208 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~--~~---~~~~~~~~~~~~~~~~~~~~~r~~ 268 (384)
T COG0515 208 LPPFEGEKNSSATSQTLKIILELPTPSLASPLSP--------------S--NP---ELISKAASDLLKKLLAKDPKNRLS 268 (384)
T ss_pred CCCCCCCCccccHHHHHHHHHhcCCcccccccCc--------------c--cc---chhhHHHHHHHHHHHhcCchhcCC
Confidence 999876542 344444433332200000000 0 00 123456889999999999999999
Q ss_pred HHHHHHHHHhh
Q 001143 1122 AGDLYEMFVAR 1132 (1141)
Q Consensus 1122 a~ElL~~L~~~ 1132 (1141)
..+...+.+..
T Consensus 269 ~~~~~~~~~~~ 279 (384)
T COG0515 269 SSSDLSHDLLA 279 (384)
T ss_pred HHHHhhchHhh
Confidence 99888775544
No 418
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.85 E-value=4.8e-22 Score=243.50 Aligned_cols=270 Identities=19% Similarity=0.201 Sum_probs=191.1
Q ss_pred CCCc-eEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 805 FPSL-SSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y-~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.+.| ....++|.|++|.|+.+... ....+.|.++.+ .. .......+...+..|+-+-..+.|||++..+..+.+.
T Consensus 316 ~~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~-~~-~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~ 393 (601)
T KOG0590|consen 316 SEKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVR-VK-PTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEI 393 (601)
T ss_pred ccccCCccceeeecccCceEEEEecCCCccchhhhhhcc-cC-CcccHHHHhhhhhhheeecccccCCchhhhHHHHhhc
Confidence 3445 67889999999988877652 222333333322 10 2222333333357888888899999999888877653
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
... .-+||||++ +|+.++.. ...++..++..++.|++.|++|+|+.||.|||||++|+++
T Consensus 394 ~~~--------------~~~mE~~~~-Dlf~~~~~-----~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~ 453 (601)
T KOG0590|consen 394 DGI--------------LQSMEYCPY-DLFSLVMS-----NGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLV 453 (601)
T ss_pred ccc--------------hhhhhcccH-HHHHHHhc-----ccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEE
Confidence 322 334999998 99999976 2468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC-CchhhHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY-GLEVDIWSYGCLLL 1040 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~-s~ksDVWSLGviL~ 1040 (1141)
+.. +.+||+|||.+......... ........+|+.+|+|||++.+ ..| ....||||.|+++.
T Consensus 454 ~~~-------g~lki~Dfg~~~vf~~~~e~------~~~~~~g~~gS~pY~apE~~~~----~~ydpr~vDiwS~~ii~~ 516 (601)
T KOG0590|consen 454 TEN-------GILKIIDFGAASVFRYPWEK------NIHESSGIVGSDPYLAPEVLTG----KEYDPRAVDVWSCGIIYI 516 (601)
T ss_pred ecC-------CceEEeecCcceeeccCcch------hhhhhcCcccCCcCcCcccccc----cccCcchhhhhhccceEE
Confidence 988 89999999998665432221 1122345679999999999987 333 46799999999999
Q ss_pred HHHhCCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
.|++|+.||......+.. ............ ..........+...+.+|.+||++||.+|
T Consensus 517 ~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~lp~~~~~~~~~~l~~~P~~R 576 (601)
T KOG0590|consen 517 CMILGRFPWKVAKKSDNSFKTNNYSDQRNIF--------------------EGPNRLLSLLPRETRIIIYRMLQLDPTKR 576 (601)
T ss_pred EEecCCCccccccccccchhhhccccccccc--------------------cChHHHHHhchhhHHHHHHHHccCChhhe
Confidence 999999999643222111 000000000000 00011122556678899999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
.|+++|++..|++.
T Consensus 577 ~ti~~i~~d~W~~~ 590 (601)
T KOG0590|consen 577 ITIEQILNDEWIRS 590 (601)
T ss_pred ecHHHHhhChHhhh
Confidence 99999999999974
No 419
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.85 E-value=4.1e-20 Score=201.16 Aligned_cols=218 Identities=23% Similarity=0.286 Sum_probs=171.4
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~ 882 (1141)
..|+++++||+|+||.++.|+. ++..||+|....+ ...++ +..|.+..+.|. .+.|..+|-+..+..
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk---S~APQ-------LrdEYr~YKlL~g~~GIP~vYYFGqeG~ 97 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK---SEAPQ-------LRDEYRTYKLLGGTEGIPQVYYFGQEGK 97 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEecccc---CCcch-------HHHHHHHHHHHcCCCCCCceeeeccccc
Confidence 3699999999999999999986 7888999864332 22222 257888888884 899998887665433
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
+-.||||++ |.||++++.-+ ...|+.+++..+|.|++.-++|+|++.+|+|||||+|+||.
T Consensus 98 --------------~NiLVidLL-GPSLEDLFD~C----gR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIG 158 (449)
T KOG1165|consen 98 --------------YNILVIDLL-GPSLEDLFDLC----GRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIG 158 (449)
T ss_pred --------------hhhhhhhhh-CcCHHHHHHHh----cCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeec
Confidence 238999999 79999998753 45799999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
..+ ......+.++|||+|+.+.++.... +.+........||..||+-....+ ..-+.+-|+=|+|.++..+
T Consensus 159 rp~--~k~~n~IhiiDFGmAK~YrDp~Tkq---HIPYrE~KSLsGTARYMSINTHlG----rEQSRRDDLEaLGHvFmYF 229 (449)
T KOG1165|consen 159 RPG--TKDANVIHIIDFGMAKEYRDPKTKQ---HIPYREHKSLSGTARYMSINTHLG----REQSRRDDLEALGHVFMYF 229 (449)
T ss_pred CCC--CCCCceEEEEeccchhhhcCccccc---cCccccccccccceeeeEeecccc----chhhhhhhHHHhhhhhhhh
Confidence 652 2233578999999999877654332 223334456679999999888776 4567899999999999999
Q ss_pred HhCCCCCCCCC---HHHHHHHH
Q 001143 1043 LTLQVPYMGLS---ELEIHDLI 1061 (1141)
Q Consensus 1043 LTGk~Pf~~~~---~~el~~~I 1061 (1141)
+-|..||++.. ..+-+++|
T Consensus 230 LRGsLPWQGLKA~tnK~kYeKI 251 (449)
T KOG1165|consen 230 LRGSLPWQGLKADTNKEKYEKI 251 (449)
T ss_pred ccCCCccccccCcchHHHHHHh
Confidence 99999998743 34445555
No 420
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.85 E-value=4.1e-21 Score=239.52 Aligned_cols=245 Identities=20% Similarity=0.243 Sum_probs=175.8
Q ss_pred cccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEc
Q 001143 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKF 98 (1141)
Q Consensus 19 l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~L 98 (1141)
...|.+..++++.++... .++|+.|+|++|+|+..+.. + + ++|+.|+|++|+|+.||..+. .+|+.|+|
T Consensus 180 ~~~L~L~~~~LtsLP~~I---p~~L~~L~Ls~N~LtsLP~~-l--~---~nL~~L~Ls~N~LtsLP~~l~--~~L~~L~L 248 (754)
T PRK15370 180 KTELRLKILGLTTIPACI---PEQITTLILDNNELKSLPEN-L--Q---GNIKTLYANSNQLTSIPATLP--DTIQEMEL 248 (754)
T ss_pred ceEEEeCCCCcCcCCccc---ccCCcEEEecCCCCCcCChh-h--c---cCCCEEECCCCccccCChhhh--ccccEEEC
Confidence 456777777787776432 24788888888888865432 2 1 578888888888888887654 36888888
Q ss_pred cCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc
Q 001143 99 FGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1141)
Q Consensus 99 s~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1141)
++|+|+.||..+. ++|+.|+|++|++..+|..+. .+|+.|+|++|.+.. +|..+. ++|+.|++++|+|+.
T Consensus 249 s~N~L~~LP~~l~--s~L~~L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~----LP~~lp--~sL~~L~Ls~N~Lt~ 318 (754)
T PRK15370 249 SINRITELPERLP--SALQSLDLFHNKISCLPENLP--EELRYLSVYDNSIRT----LPAHLP--SGITHLNVQSNSLTA 318 (754)
T ss_pred cCCccCcCChhHh--CCCCEEECcCCccCccccccC--CCCcEEECCCCcccc----Ccccch--hhHHHHHhcCCcccc
Confidence 8888888887764 578888888888887776553 478888888876654 333332 357788888888888
Q ss_pred cCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCC
Q 001143 179 LPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHN 258 (1141)
Q Consensus 179 iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~ 258 (1141)
+|..+. ++|+.|++++|.|+.+|..+. ++|+.|+|++|+|+.||..+. ++|+.|+|++|+|+.+|+. +. ..
T Consensus 319 LP~~l~--~sL~~L~Ls~N~Lt~LP~~l~--~sL~~L~Ls~N~L~~LP~~lp--~~L~~LdLs~N~Lt~LP~~-l~--~s 389 (754)
T PRK15370 319 LPETLP--PGLKTLEAGENALTSLPASLP--PELQVLDVSKNQITVLPETLP--PTITTLDVSRNALTNLPEN-LP--AA 389 (754)
T ss_pred CCcccc--ccceeccccCCccccCChhhc--CcccEEECCCCCCCcCChhhc--CCcCEEECCCCcCCCCCHh-HH--HH
Confidence 876543 688888888888888887664 688888888888888887664 5788888888888877663 32 36
Q ss_pred CCEEEccCCcCCCCCCCchhhhhc----ccCCCCCCCCCCcc
Q 001143 259 LQNLNLQYNKLLSYCQVPSWICCN----LEGNGKDSSNDDFI 296 (1141)
Q Consensus 259 L~~L~Ls~N~L~~~~~iP~~~~~~----l~~~~l~~~~n~l~ 296 (1141)
|+.|++++|+|+. +|..+... .....+.+.+|.+.
T Consensus 390 L~~LdLs~N~L~~---LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 390 LQIMQASRNNLVR---LPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHHhhccCCccc---CchhHHHHhhcCCCccEEEeeCCCcc
Confidence 8888888888876 55544322 22334455555544
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.84 E-value=8.4e-21 Score=235.47 Aligned_cols=230 Identities=22% Similarity=0.163 Sum_probs=181.5
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCC--------------CCCccEEEeecCCCCc
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGG--------------DNSVEGLYLYKNVLNL 82 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~--------------L~~L~~L~Ls~N~Lt~ 82 (1141)
+.+..|.+..|+|+.++. .+++|++|+|++|+|+.++ ..+..+.. ..+|+.|+|++|+|+.
T Consensus 222 ~~L~~L~L~~N~Lt~LP~----lp~~Lk~LdLs~N~LtsLP-~lp~sL~~L~Ls~N~L~~Lp~lp~~L~~L~Ls~N~Lt~ 296 (788)
T PRK15387 222 AHITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLP-VLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTS 296 (788)
T ss_pred cCCCEEEccCCcCCCCCC----CCCCCcEEEecCCccCccc-CcccccceeeccCCchhhhhhchhhcCEEECcCCcccc
Confidence 357777888888887764 2577888888888887553 22222211 1468899999999999
Q ss_pred cCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcC
Q 001143 83 IPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAG 162 (1141)
Q Consensus 83 iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~ 162 (1141)
+|.. +++|+.|+|++|+|+.+|... .+|+.|++++|+++.+|..+ .+|+.|+|++|.+.. +|..
T Consensus 297 LP~~---p~~L~~LdLS~N~L~~Lp~lp---~~L~~L~Ls~N~L~~LP~lp---~~Lq~LdLS~N~Ls~----LP~l--- 360 (788)
T PRK15387 297 LPVL---PPGLQELSVSDNQLASLPALP---SELCKLWAYNNQLTSLPTLP---SGLQELSVSDNQLAS----LPTL--- 360 (788)
T ss_pred cccc---ccccceeECCCCccccCCCCc---ccccccccccCccccccccc---cccceEecCCCccCC----CCCC---
Confidence 9863 468999999999999998643 46788899999998887532 579999999987753 3432
Q ss_pred CCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCC
Q 001143 163 LKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSN 242 (1141)
Q Consensus 163 L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~ 242 (1141)
..+|+.|++++|+|+.+|.. +.+|+.|+|++|+|+.+|... ++|+.|+|++|+|+.||... .+|+.|+|++
T Consensus 361 p~~L~~L~Ls~N~L~~LP~l---~~~L~~LdLs~N~Lt~LP~l~---s~L~~LdLS~N~LssIP~l~---~~L~~L~Ls~ 431 (788)
T PRK15387 361 PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTSLPVLP---SELKELMVSGNRLTSLPMLP---SGLLSLSVYR 431 (788)
T ss_pred CcccceehhhccccccCccc---ccccceEEecCCcccCCCCcc---cCCCEEEccCCcCCCCCcch---hhhhhhhhcc
Confidence 24688899999999999864 368999999999999998643 57999999999999999643 4688999999
Q ss_pred CCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhh
Q 001143 243 NRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWI 279 (1141)
Q Consensus 243 N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~ 279 (1141)
|+|+.+| ..++++++|+.|+|++|+|++ .+|..+
T Consensus 432 NqLt~LP-~sl~~L~~L~~LdLs~N~Ls~--~~~~~L 465 (788)
T PRK15387 432 NQLTRLP-ESLIHLSSETTVNLEGNPLSE--RTLQAL 465 (788)
T ss_pred CcccccC-hHHhhccCCCeEECCCCCCCc--hHHHHH
Confidence 9999765 579999999999999999998 455544
No 422
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.84 E-value=3.5e-21 Score=240.16 Aligned_cols=229 Identities=19% Similarity=0.237 Sum_probs=192.3
Q ss_pred CCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001143 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1141)
Q Consensus 16 ~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1141)
++.+..|.+..|+|+.++...+ .+|+.|+|++|+|+.+ |..+. .+|+.|+|++|.|+.||..+. .+|+.
T Consensus 198 p~~L~~L~Ls~N~LtsLP~~l~---~nL~~L~Ls~N~LtsL-P~~l~-----~~L~~L~Ls~N~L~~LP~~l~--s~L~~ 266 (754)
T PRK15370 198 PEQITTLILDNNELKSLPENLQ---GNIKTLYANSNQLTSI-PATLP-----DTIQEMELSINRITELPERLP--SALQS 266 (754)
T ss_pred ccCCcEEEecCCCCCcCChhhc---cCCCEEECCCCccccC-Chhhh-----ccccEEECcCCccCcCChhHh--CCCCE
Confidence 4568999999999999987655 4899999999999965 44332 479999999999999998775 47999
Q ss_pred EEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001143 96 LKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1141)
Q Consensus 96 L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1141)
|+|++|+|+.||..+. ++|+.|+|++|+++.+|..+. .+|+.|++++|.+.. +|..+ .++|+.|++++|.
T Consensus 267 L~Ls~N~L~~LP~~l~--~sL~~L~Ls~N~Lt~LP~~lp--~sL~~L~Ls~N~Lt~----LP~~l--~~sL~~L~Ls~N~ 336 (754)
T PRK15370 267 LDLFHNKISCLPENLP--EELRYLSVYDNSIRTLPAHLP--SGITHLNVQSNSLTA----LPETL--PPGLKTLEAGENA 336 (754)
T ss_pred EECcCCccCccccccC--CCCcEEECCCCccccCcccch--hhHHHHHhcCCcccc----CCccc--cccceeccccCCc
Confidence 9999999999998775 589999999999988886543 479999999977754 34333 2579999999999
Q ss_pred CCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCc---cc
Q 001143 176 IRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS---LD 252 (1141)
Q Consensus 176 L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p---~~ 252 (1141)
|+.+|..+. ++|+.|+|++|+|+.+|..+. ++|+.|+|++|+|+.||..+. ..|+.|++++|+|++++. ..
T Consensus 337 Lt~LP~~l~--~sL~~L~Ls~N~L~~LP~~lp--~~L~~LdLs~N~Lt~LP~~l~--~sL~~LdLs~N~L~~LP~sl~~~ 410 (754)
T PRK15370 337 LTSLPASLP--PELQVLDVSKNQITVLPETLP--PTITTLDVSRNALTNLPENLP--AALQIMQASRNNLVRLPESLPHF 410 (754)
T ss_pred cccCChhhc--CcccEEECCCCCCCcCChhhc--CCcCEEECCCCcCCCCCHhHH--HHHHHHhhccCCcccCchhHHHH
Confidence 999998764 799999999999999998764 689999999999999998775 469999999999997753 23
Q ss_pred ccCCCCCCEEEccCCcCCC
Q 001143 253 LCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~ 271 (1141)
+..++.+..|+|.+|+|+.
T Consensus 411 ~~~~~~l~~L~L~~Npls~ 429 (754)
T PRK15370 411 RGEGPQPTRIIVEYNPFSE 429 (754)
T ss_pred hhcCCCccEEEeeCCCccH
Confidence 4456889999999999974
No 423
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.84 E-value=2.9e-21 Score=204.41 Aligned_cols=259 Identities=25% Similarity=0.332 Sum_probs=199.2
Q ss_pred CCCCCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 799 GLDPGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 799 ~~~~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
.+.-.++.++.+..+|.+..+|..|+|+|.+..+++||..+.. ......++| ..|.-.|+-+.||||..+++.+
T Consensus 183 r~~gid~~~lnl~tkl~e~hsgelwrgrwqgndivakil~vr~--~t~risrdf----neefp~lrifshpnilpvlgac 256 (448)
T KOG0195|consen 183 RYTGIDVSSLNLITKLAESHSGELWRGRWQGNDIVAKILNVRE--VTARISRDF----NEEFPALRIFSHPNILPVLGAC 256 (448)
T ss_pred cccCcchhhhhhhhhhccCCCcccccccccCcchhhhhhhhhh--cchhhcchh----hhhCcceeeecCCchhhhhhhc
Confidence 3445567778889999999999999999999999999865443 233333444 7788888888999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKS 956 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g--IvHrDLKP 956 (1141)
.... ++.++..|++.|||+..++. ......+..++.+++.+|++|+.|||+.. |.---|.+
T Consensus 257 nspp--------------nlv~isq~mp~gslynvlhe---~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns 319 (448)
T KOG0195|consen 257 NSPP--------------NLVIISQYMPFGSLYNVLHE---QTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNS 319 (448)
T ss_pred cCCC--------------CceEeeeeccchHHHHHHhc---CccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhccc
Confidence 7643 45999999999999999986 34456788999999999999999999863 44556889
Q ss_pred CCeeeecccccCCCCCeEEE--eeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001143 957 ENILIDLERKKADGKPVVKL--CDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1034 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL--~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWS 1034 (1141)
..++||++ .+.+| +|--++.. .....-.|.||+||.++.... ...-.++|+||
T Consensus 320 ~hvmided-------ltarismad~kfsfq-----------------e~gr~y~pawmspealqrkpe-d~n~raadmws 374 (448)
T KOG0195|consen 320 KHVMIDED-------LTARISMADTKFSFQ-----------------EVGRAYSPAWMSPEALQRKPE-DLNIRAADMWS 374 (448)
T ss_pred ceEEecch-------hhhheecccceeeee-----------------ccccccCcccCCHHHHhcCch-hcchhhhhHHH
Confidence 99999987 34443 34332211 012235788999999986332 12336899999
Q ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001143 1035 YGCLLLELLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1035 LGviL~ELLTGk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~ 1113 (1141)
|++++||+.|...||...++++.--+| ..+.++.++ +.++..+..|+.-|+.
T Consensus 375 faillwel~trevpfadlspmecgmkialeglrv~ip---------------------------pgis~hm~klm~icmn 427 (448)
T KOG0195|consen 375 FAILLWELNTREVPFADLSPMECGMKIALEGLRVHIP---------------------------PGISRHMNKLMNICMN 427 (448)
T ss_pred HHHHHHHhhccccccccCCchhhhhhhhhccccccCC---------------------------CCccHHHHHHHHHHhc
Confidence 999999999999999998888876555 445444433 2566778999999999
Q ss_pred cCCCCCCCHHHHHHHHHhh
Q 001143 1114 ENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.||.+||.++.|+-.++..
T Consensus 428 edpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 428 EDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred CCCCcCCCcceehhhHHHh
Confidence 9999999999988776643
No 424
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=3e-19 Score=187.12 Aligned_cols=212 Identities=19% Similarity=0.228 Sum_probs=163.0
Q ss_pred CCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 879 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~ 879 (1141)
.-...|.++++||.|+||.+|.|.. .+..||+|+...+. ..+ . +..|..+...|+ -..|..+..++.
T Consensus 12 iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a---~hp---q----L~yEskvY~iL~~g~GiP~i~~y~~ 81 (341)
T KOG1163|consen 12 IVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA---KHP---Q----LLYESKVYRILQGGVGIPHIRHYGT 81 (341)
T ss_pred eeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC---CCc---c----hhHHHHHHHHhccCCCCchhhhhcc
Confidence 3456799999999999999999987 57788888754332 222 1 257888888886 456666666666
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+..+- .+||+++ |.||++++.-+ ...++..+++-++-|++.-++|+|.+++|||||||+|+
T Consensus 82 e~~yn--------------vlVMdLL-GPsLEdLfnfC----~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNF 142 (341)
T KOG1163|consen 82 EKDYN--------------VLVMDLL-GPSLEDLFNFC----SRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNF 142 (341)
T ss_pred ccccc--------------eeeeecc-CccHHHHHHHH----hhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccce
Confidence 54432 8999999 79999998753 34699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|..-.. ....+.++|||+|+.+.+..... +-+........||..|.+-....+ ...+.+.|+=|+|.+|
T Consensus 143 LMGlgr----h~~kl~LIDFGLaKky~d~~t~~---HIpyre~r~ltGTaRYASinAh~g----~eqSRRDDmeSvgYvL 211 (341)
T KOG1163|consen 143 LMGLGR----HCNKLYLIDFGLAKKYRDIRTRQ---HIPYREDRNLTGTARYASINAHLG----IEQSRRDDMESVGYVL 211 (341)
T ss_pred eecccc----ccceEEEEeccchhhhccccccc---cCccccCCccceeeeehhhhhhhh----hhhhhhhhhhhhccee
Confidence 986541 12568999999998876543221 222223345679999999877765 3446789999999999
Q ss_pred HHHHhCCCCCCCCCH
Q 001143 1040 LELLTLQVPYMGLSE 1054 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~ 1054 (1141)
..+.-|..||++...
T Consensus 212 mYfnrG~LPWQglka 226 (341)
T KOG1163|consen 212 MYFNRGSLPWQGLKA 226 (341)
T ss_pred eeeecCCCcccccch
Confidence 999999999998543
No 425
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.82 E-value=1e-22 Score=203.29 Aligned_cols=186 Identities=23% Similarity=0.350 Sum_probs=132.8
Q ss_pred CCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEEC
Q 001143 65 GGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELEL 144 (1141)
Q Consensus 65 ~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~L 144 (1141)
..+..++.|.||+|+|+.+|+.+..|.+|+.|+++||+|+.+|.+++.|++|+.|+++.|++..+|..
T Consensus 30 f~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp~~issl~klr~lnvgmnrl~~lprg------------ 97 (264)
T KOG0617|consen 30 FNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELPTSISSLPKLRILNVGMNRLNILPRG------------ 97 (264)
T ss_pred cchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcChhhhhchhhhheecchhhhhcCccc------------
Confidence 34578899999999999999999999999999999999999999999999999999887776665544
Q ss_pred CCCCCCCCcccchhhhcCCCCCcEEEccCCCCC--ccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCC
Q 001143 145 SKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR--YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKL 222 (1141)
Q Consensus 145 s~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~--~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L 222 (1141)
|+.++.|+.|||.+|++. .+|..|..|+.|+.|+|++|.++-+|..++++++|+.|.|..|.|
T Consensus 98 ---------------fgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndl 162 (264)
T KOG0617|consen 98 ---------------FGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDL 162 (264)
T ss_pred ---------------cCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCch
Confidence 445555555555555555 456666666666666666666666666666666666666666666
Q ss_pred CcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCC---CCCEEEccCCcCCCCCCCchhhh
Q 001143 223 VELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMH---NLQNLNLQYNKLLSYCQVPSWIC 280 (1141)
Q Consensus 223 ~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~---~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1141)
-++|.+++.|++|+.|.+.+|+|+-+|| .++++. +=+.+.+.+|+|.. +|..++.
T Consensus 163 l~lpkeig~lt~lrelhiqgnrl~vlpp-el~~l~l~~~k~v~r~E~NPwv~--pIaeQf~ 220 (264)
T KOG0617|consen 163 LSLPKEIGDLTRLRELHIQGNRLTVLPP-ELANLDLVGNKQVMRMEENPWVN--PIAEQFL 220 (264)
T ss_pred hhCcHHHHHHHHHHHHhcccceeeecCh-hhhhhhhhhhHHHHhhhhCCCCC--hHHHHHH
Confidence 6666666666666666666666666666 344433 23456677888866 4554444
No 426
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.82 E-value=5.6e-20 Score=212.60 Aligned_cols=172 Identities=20% Similarity=0.180 Sum_probs=121.4
Q ss_pred CCCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCC-CChHHHHHhHHhHHHHHHHHhhCCCCCccc-eeeeEe
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCG-SSADEIRNFEYSCLGEVRMLGALRHSCIVE-MYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~---~~~vAvKI~~l~~~~-~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVk-llg~~~ 879 (1141)
..+|.+.++||+|+||+||+|.+. +..+|+|........ ..... ...+.+|+++|++++|+||+. ++++
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~----~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLA----RHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHH----HHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 456999999999999999999873 444577654311100 01111 233589999999999999985 4332
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC-CCCC
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI-KSEN 958 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDL-KP~N 958 (1141)
. ..|+||||++|++|.. +.. .. ...++.|++.||.|||++||+|||| ||+|
T Consensus 91 --~--------------~~~LVmE~~~G~~L~~-~~~--------~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~N 142 (365)
T PRK09188 91 --G--------------KDGLVRGWTEGVPLHL-ARP--------HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQN 142 (365)
T ss_pred --C--------------CcEEEEEccCCCCHHH-hCc--------cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcce
Confidence 1 2399999999999962 211 11 1467899999999999999999999 9999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcc
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA 1019 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 1019 (1141)
||++.+ +.+||+|||+|+.+.......... .........+++.|+|||++..
T Consensus 143 ILv~~~-------~~ikLiDFGlA~~~~~~~~~~~~~--~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 143 WLMGPD-------GEAAVIDFQLASVFRRRGALYRIA--AYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred EEEcCC-------CCEEEEECccceecccCcchhhhh--hhhhhhhhhccCccCCcccCCh
Confidence 999876 689999999998765432111100 0011125568899999999864
No 427
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.82 E-value=6.7e-22 Score=237.73 Aligned_cols=220 Identities=26% Similarity=0.298 Sum_probs=157.4
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEc
Q 001143 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQI 121 (1141)
Q Consensus 42 ~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~L 121 (1141)
+|+++|+|+|++++.+ +|++.+ .+|+.|...+|+|+.+|..+..+.+|+.|.+.+|.++.+|.....++.|++|+|
T Consensus 242 nl~~~dis~n~l~~lp-~wi~~~---~nle~l~~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL 317 (1081)
T KOG0618|consen 242 NLQYLDISHNNLSNLP-EWIGAC---ANLEALNANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDL 317 (1081)
T ss_pred cceeeecchhhhhcch-HHHHhc---ccceEecccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeee
Confidence 6677777777777654 666554 677777777777777777777777777777777777777776666777777777
Q ss_pred cCCCCCCCcccccC--------------------------CCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001143 122 KISSPGVNGFALNK--------------------------LKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1141)
Q Consensus 122 s~N~l~~~~~~~~~--------------------------L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1141)
..|++..+|+.+.. ++.|+.|++.+|.++... -..+-+..+|+.|+|++|+
T Consensus 318 ~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c---~p~l~~~~hLKVLhLsyNr 394 (1081)
T KOG0618|consen 318 QSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSC---FPVLVNFKHLKVLHLSYNR 394 (1081)
T ss_pred hhccccccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccccc---hhhhccccceeeeeecccc
Confidence 77776666653211 122344455554443322 2245667788888888888
Q ss_pred CCccCc-cccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCccccc
Q 001143 176 IRYLPP-EIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLC 254 (1141)
Q Consensus 176 L~~iP~-~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~ 254 (1141)
|..+|+ .+.+++.|+.|+||+|+|+.||..+.+++.|++|...+|+|...| ++.+++.|+.+|||.|+|+...-..-.
T Consensus 395 L~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~ 473 (1081)
T KOG0618|consen 395 LNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNLSEVTLPEAL 473 (1081)
T ss_pred cccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccchhhhhhhhhhC
Confidence 888887 457888888888888888888888888888888888888888888 788888888888888888755432333
Q ss_pred CCCCCCEEEccCCcC
Q 001143 255 LMHNLQNLNLQYNKL 269 (1141)
Q Consensus 255 ~L~~L~~L~Ls~N~L 269 (1141)
..++|++|||+||..
T Consensus 474 p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 474 PSPNLKYLDLSGNTR 488 (1081)
T ss_pred CCcccceeeccCCcc
Confidence 337888888888874
No 428
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.81 E-value=1.3e-19 Score=200.63 Aligned_cols=216 Identities=23% Similarity=0.337 Sum_probs=148.7
Q ss_pred CCCCccceeeeEecCCC-CCCC-----CC-------CCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHH
Q 001143 867 RHSCIVEMYGHKISSKW-LPSA-----DG-------NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFI 933 (1141)
Q Consensus 867 ~HpNIVkllg~~~~~~~-~~~~-----~g-------~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~I 933 (1141)
+|||||+++++|.+.-. +|.. +- ....+...+|+||.-++ .+|..++.. ...+.....-|
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~------~~~s~r~~~~~ 346 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT------RHRSYRTGRVI 346 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc------CCCchHHHHHH
Confidence 59999999999876421 1110 00 12223456899999997 899999875 24677888889
Q ss_pred HHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccc
Q 001143 934 AQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMA 1013 (1141)
Q Consensus 934 a~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 1013 (1141)
+.|+++|+.|||.+||.|||+|++|||+.-+ +++...+.++|||+|-.-+...-...... ..-...|.-.-||
T Consensus 347 laQlLEav~hL~~hgvAhRDlKSDNiL~Eld---dD~~P~LVvaDFGCcLAd~~hGlqlpy~S----~~Vd~GGNa~lmA 419 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKHGVAHRDLKSDNILLELD---DDEIPQLVVADFGCCLADDNHGLQLPYES----DEVDLGGNAKLMA 419 (598)
T ss_pred HHHHHHHHHHHHHccchhhcccccceEEEec---CCCCcEEEEcccceeeecccccccccccc----ccccCCCcceecc
Confidence 9999999999999999999999999999655 23446789999999854222110000000 0112246777899
Q ss_pred hhhhccccCCC--CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhccCccccccccCCC
Q 001143 1014 PEVLRAMHKPN--LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSG 1090 (1141)
Q Consensus 1014 PE~l~~~~~~~--~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~ 1090 (1141)
||+........ ..-.|+|.|+.|.+.||+++...||.+...+.+- ...+....|.++
T Consensus 420 PEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLPalp-------------------- 479 (598)
T KOG4158|consen 420 PEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLPALP-------------------- 479 (598)
T ss_pred hhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCCCCc--------------------
Confidence 99987643211 1236999999999999999999999874332211 112222222222
Q ss_pred CCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1091 FEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1091 ~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
..+++.+++++...|+.||.+|++..
T Consensus 480 -------~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 480 -------SRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred -------ccCChHHHHHHHHHhcCCccccCCcc
Confidence 25667799999999999999998854
No 429
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.80 E-value=5e-22 Score=198.35 Aligned_cols=184 Identities=24% Similarity=0.358 Sum_probs=154.7
Q ss_pred cccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCC
Q 001143 86 SVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKC 165 (1141)
Q Consensus 86 ~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~ 165 (1141)
.+.++..++.|-||+|+|+.+|+.+..|.+|++|++++|++..+| ..++.|+.
T Consensus 28 gLf~~s~ITrLtLSHNKl~~vppnia~l~nlevln~~nnqie~lp---------------------------~~issl~k 80 (264)
T KOG0617|consen 28 GLFNMSNITRLTLSHNKLTVVPPNIAELKNLEVLNLSNNQIEELP---------------------------TSISSLPK 80 (264)
T ss_pred cccchhhhhhhhcccCceeecCCcHHHhhhhhhhhcccchhhhcC---------------------------hhhhhchh
Confidence 466777888899999999999888888888888888876655544 45666777
Q ss_pred CcEEEccCCCCCccCccccCCCCCCEEEccCCccc--cccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCC
Q 001143 166 LTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMK--YLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNN 243 (1141)
Q Consensus 166 L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~--~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N 243 (1141)
|+.|.++-|++..+|..|+.++.|+.|||+.|++. .+|..|..++.|+.|+|+.|.+.-+|..+++|++|+.|.|..|
T Consensus 81 lr~lnvgmnrl~~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdn 160 (264)
T KOG0617|consen 81 LRILNVGMNRLNILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDN 160 (264)
T ss_pred hhheecchhhhhcCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccC
Confidence 78888888888889999999999999999999998 7999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhh---cccCCCCCCCCCCcccCcc
Q 001143 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICC---NLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 244 ~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~---~l~~~~l~~~~n~l~~~~~ 300 (1141)
.|-.+|. .++.|..|+.|.+.+|+|+- +|+.+.. ........+..|.+..++.
T Consensus 161 dll~lpk-eig~lt~lrelhiqgnrl~v---lppel~~l~l~~~k~v~r~E~NPwv~pIa 216 (264)
T KOG0617|consen 161 DLLSLPK-EIGDLTRLRELHIQGNRLTV---LPPELANLDLVGNKQVMRMEENPWVNPIA 216 (264)
T ss_pred chhhCcH-HHHHHHHHHHHhcccceeee---cChhhhhhhhhhhHHHHhhhhCCCCChHH
Confidence 9988865 89999999999999999997 8887763 2223344455565555543
No 430
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=7.8e-20 Score=222.68 Aligned_cols=260 Identities=20% Similarity=0.199 Sum_probs=182.7
Q ss_pred CceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
+|...+.||.+.|=.|.+|++....++||||..+.........++ + +.|++ .+.++|||.+.+.-....+..
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~q---r-L~~ik-~~l~~~pn~lPfqk~~~t~kA--- 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQ---R-LEEIK-FALMKAPNCLPFQKVLVTDKA--- 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHH---H-HHHHH-HHhhcCCcccchHHHHHhhHH---
Confidence 788999999999999999999888899999875543333333332 2 45566 556689999998776554432
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
.|||-+|+. .+|++.+.. +.-+...+.+.|+.|++.||.-+|..||+|||||.+||||+.-
T Consensus 96 -----------AylvRqyvk-hnLyDRlST-----RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSW-- 156 (1431)
T KOG1240|consen 96 -----------AYLVRQYVK-HNLYDRLST-----RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSW-- 156 (1431)
T ss_pred -----------HHHHHHHHh-hhhhhhhcc-----chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeee--
Confidence 388889986 799999865 3457888899999999999999999999999999999999876
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-------CCCCCCchhhHHHHHHHH
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~s~ksDVWSLGviL 1039 (1141)
..+.|+||..-++.--+..... .-.... ++...-..|.|||.+-... .....+++.||||+||++
T Consensus 157 -----NW~~LtDFAsFKPtYLPeDNPa--df~fFF-DTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCVi 228 (1431)
T KOG1240|consen 157 -----NWLYLTDFASFKPTYLPEDNPA--DFTFFF-DTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVI 228 (1431)
T ss_pred -----chhhhhcccccCCccCCCCCcc--cceEEE-ecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHH
Confidence 6799999987654211110000 000000 0111234699999886411 111257899999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+||++ |++||. ..+++.. +.+........+.. -....++.++..|++.||.+
T Consensus 229 aELf~Eg~PlF~---LSQL~aY-r~~~~~~~e~~Le~-----------------------Ied~~~Rnlil~Mi~rdPs~ 281 (1431)
T KOG1240|consen 229 AELFLEGRPLFT---LSQLLAY-RSGNADDPEQLLEK-----------------------IEDVSLRNLILSMIQRDPSK 281 (1431)
T ss_pred HHHHhcCCCccc---HHHHHhH-hccCccCHHHHHHh-----------------------CcCccHHHHHHHHHccCchh
Confidence 99998 788885 2233222 22222221211111 11235899999999999999
Q ss_pred CCCHHHHHHH
Q 001143 1119 RPTAGDLYEM 1128 (1141)
Q Consensus 1119 RPSa~ElL~~ 1128 (1141)
|.+|++.|+.
T Consensus 282 RlSAedyL~~ 291 (1431)
T KOG1240|consen 282 RLSAEDYLQK 291 (1431)
T ss_pred ccCHHHHHHh
Confidence 9999999986
No 431
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.78 E-value=7.9e-21 Score=228.60 Aligned_cols=263 Identities=21% Similarity=0.232 Sum_probs=209.1
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1141)
+++.|..+.|++..+.. ..++|+.|+.++|-|+...+... -.+|+++++++|+++.+|.++..+.+|+.|+
T Consensus 200 ~l~~l~c~rn~ls~l~~----~g~~l~~L~a~~n~l~~~~~~p~-----p~nl~~~dis~n~l~~lp~wi~~~~nle~l~ 270 (1081)
T KOG0618|consen 200 NLEVLHCERNQLSELEI----SGPSLTALYADHNPLTTLDVHPV-----PLNLQYLDISHNNLSNLPEWIGACANLEALN 270 (1081)
T ss_pred chhhhhhhhcccceEEe----cCcchheeeeccCcceeeccccc-----cccceeeecchhhhhcchHHHHhcccceEec
Confidence 55666666666665543 34678888888888885544322 1589999999999999999999999999999
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccc----hh---------------
Q 001143 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTL----LS--------------- 158 (1141)
Q Consensus 98 Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~l----p~--------------- 158 (1141)
+++|+|+.+|..+...++|+.|.+.+|.+..+|+....++.|++|+|..|.+..+.... +.
T Consensus 271 ~n~N~l~~lp~ri~~~~~L~~l~~~~nel~yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~l 350 (1081)
T KOG0618|consen 271 ANHNRLVALPLRISRITSLVSLSAAYNELEYIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTL 350 (1081)
T ss_pred ccchhHHhhHHHHhhhhhHHHHHhhhhhhhhCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccccc
Confidence 99999999999999999999999999999999999999999999999997653221110 00
Q ss_pred -hh--cCCCCCcEEEccCCCCC-ccCccccCCCCCCEEEccCCcccccccc-ccCCCCCCEEEccCCCCCcCCcCccCCC
Q 001143 159 -EI--AGLKCLTKLSVCHFSIR-YLPPEIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGLYLLQ 233 (1141)
Q Consensus 159 -~l--~~L~~L~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~IP~~l~~L~ 233 (1141)
.+ .....|+.|++.+|.|+ ..-+-+-++.+|+.|+|++|+|.++|.+ +.+|..|+.|+||+|+|+.||.++.++.
T Consensus 351 p~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~~Lp~tva~~~ 430 (1081)
T KOG0618|consen 351 PSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLTTLPDTVANLG 430 (1081)
T ss_pred ccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhhhhhHHHHhhh
Confidence 00 11245677888999998 3333468889999999999999999954 7889999999999999999999999999
Q ss_pred CCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCC
Q 001143 234 RLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSND 293 (1141)
Q Consensus 234 ~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n 293 (1141)
.|+.|...+|+|...| .+..++.|+.+|++.|.|+.. -+|...-| -.+..+++++|
T Consensus 431 ~L~tL~ahsN~l~~fP--e~~~l~qL~~lDlS~N~L~~~-~l~~~~p~-p~LkyLdlSGN 486 (1081)
T KOG0618|consen 431 RLHTLRAHSNQLLSFP--ELAQLPQLKVLDLSCNNLSEV-TLPEALPS-PNLKYLDLSGN 486 (1081)
T ss_pred hhHHHhhcCCceeech--hhhhcCcceEEecccchhhhh-hhhhhCCC-cccceeeccCC
Confidence 9999999999999887 689999999999999999873 22322221 34445555555
No 432
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.77 E-value=2.5e-18 Score=182.68 Aligned_cols=145 Identities=14% Similarity=0.090 Sum_probs=107.4
Q ss_pred eeeecccCceEEEEEEE-CCccEEEEEEecccCCCChH-H-----------------HHHhHHhHHHHHHHHhhCCCCCc
Q 001143 811 CDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSAD-E-----------------IRNFEYSCLGEVRMLGALRHSCI 871 (1141)
Q Consensus 811 ~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~-~-----------------~~~~~~~~~~Ei~iL~~L~HpNI 871 (1141)
.+.||+|++|.||+|.. .+..||+|+.+......... . .+........|+.++.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 46899999999999997 47789999876543211110 0 00112233569999999988877
Q ss_pred cceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHH-HHCCcc
Q 001143 872 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVEL-HSKHIM 950 (1141)
Q Consensus 872 Vkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yL-Hs~gIv 950 (1141)
.....+... ..+|||||++|+++...+.. ...++...+..++.|++.+|.|+ |+.||+
T Consensus 82 ~~p~~~~~~----------------~~~iVmE~i~g~~l~~~~~~-----~~~~~~~~~~~i~~qi~~~L~~l~H~~gii 140 (190)
T cd05147 82 PCPEPILLK----------------SHVLVMEFIGDDGWAAPRLK-----DAPLSESKARELYLQVIQIMRILYQDCRLV 140 (190)
T ss_pred CCCcEEEec----------------CCEEEEEEeCCCCCcchhhh-----cCCCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 544332211 12899999998777654322 24689999999999999999999 799999
Q ss_pred ccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 951 HRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 951 HrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
||||||+|||++. +.++|+|||+|..
T Consensus 141 HrDlkP~NIli~~--------~~v~LiDFG~a~~ 166 (190)
T cd05147 141 HADLSEYNLLYHD--------GKLYIIDVSQSVE 166 (190)
T ss_pred cCCCCHHHEEEEC--------CcEEEEEcccccc
Confidence 9999999999973 5699999999864
No 433
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.76 E-value=2.2e-18 Score=191.94 Aligned_cols=255 Identities=20% Similarity=0.225 Sum_probs=154.4
Q ss_pred CceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC----------CCCccce
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR----------HSCIVEM 874 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~----------HpNIVkl 874 (1141)
.+...+.||.|+++.||.+++. +...++|++.... .......+++ ++|.-....+. |-.++..
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~-~~~~~~~~~~----~~e~l~~~~~~~~~~p~~a~~~~r~l~P 87 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA-DASANEYEQL----KEEQLAITLFPGVKNPKEAYRHLRFLVP 87 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS-TTHTTHHHHH----HHHHHGGGGSTT--SHHHHHHHH-B---
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEeccc-ccchHHHHHH----HHHHHHhhhhccCCCHHHHHHhceEEee
Confidence 3578899999999999999995 4889999987665 2222334444 44543333332 2234444
Q ss_pred eeeEecCCCCCCCCCCCc---cccceEEEEEeeccCCCHHHHHHHhhhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCc
Q 001143 875 YGHKISSKWLPSADGNPE---HHLLQSAIFMEYVKGGSVKNYIEKLSETGEK--HVSVKLALFIAQDVAAALVELHSKHI 949 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~---~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~--~Ls~~~i~~Ia~QIa~gL~yLHs~gI 949 (1141)
++...-.+.-+....... ......+++|+-+. ++|.+++.-.+..... .+.......+..|+++.+++||+.|+
T Consensus 88 ~d~~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~Gl 166 (288)
T PF14531_consen 88 LDLLRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGL 166 (288)
T ss_dssp SEEEEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred eEEEEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcce
Confidence 444332211101111111 11224578999885 8999887654433322 23344456677999999999999999
Q ss_pred cccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc----CCCC
Q 001143 950 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH----KPNL 1025 (1141)
Q Consensus 950 vHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~~~~ 1025 (1141)
+|+||+|+|++++.+ |.++|+||+........... ...+..|.+||...... ....
T Consensus 167 VHgdi~~~nfll~~~-------G~v~Lg~F~~~~r~g~~~~~-------------~~~~~~~~PPe~~~~~~~~~~~~~~ 226 (288)
T PF14531_consen 167 VHGDIKPENFLLDQD-------GGVFLGDFSSLVRAGTRYRC-------------SEFPVAFTPPELESCAGQFGQNNAP 226 (288)
T ss_dssp EEST-SGGGEEE-TT-------S-EEE--GGGEEETTEEEEG-------------GGS-TTTS-HHHHHHHTSCHHSEEE
T ss_pred EecccceeeEEEcCC-------CCEEEcChHHHeecCceeec-------------cCCCcccCChhhhhhhcccCcccce
Confidence 999999999999998 89999999988655432110 12457799999875421 1235
Q ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHH
Q 001143 1026 YGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1105 (1141)
Q Consensus 1026 ~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1105 (1141)
++.+.|.|++|+++|.|+.+..||........... . ...+. +.++.++
T Consensus 227 ~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-----------~--------------------f~~C~-~~Pe~v~ 274 (288)
T PF14531_consen 227 YTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-----------D--------------------FSRCR-DMPEPVQ 274 (288)
T ss_dssp E-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-----------G--------------------GTTSS----HHHH
T ss_pred eeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-----------c--------------------chhcC-CcCHHHH
Confidence 78999999999999999999999975322110000 0 01112 5567799
Q ss_pred HHHHHhcccCCCCC
Q 001143 1106 DVFRRCTEENPTER 1119 (1141)
Q Consensus 1106 dLI~~cL~~DP~~R 1119 (1141)
.||..+|+.||.+|
T Consensus 275 ~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 275 FLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHHHHT-SSGGGS
T ss_pred HHHHHHccCCcccC
Confidence 99999999999988
No 434
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.75 E-value=4.1e-18 Score=184.52 Aligned_cols=183 Identities=13% Similarity=0.131 Sum_probs=130.8
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHh--HHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNF--EYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~--~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.++||.|+||.||++...+..+++|++.-+... .......+ ...+.+|+..+.++.||+|..+.+++.....
T Consensus 31 ~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~-~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 31 YNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKR-TERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred CceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCc-hHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 46899999999999999998887888999997543221 11111111 1114789999999999999999998765321
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. ........++||||++|.+|.++.. +++ ....+|+.++..+|+.|++|||+||+||++++
T Consensus 110 ~------~~~~~~~~~lvmEyi~G~tL~~~~~---------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~ 170 (232)
T PRK10359 110 K------TLRYAHTYIMLIEYIEGVELNDMPE---------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSK 170 (232)
T ss_pred c------cccccCCeEEEEEEECCccHHHhhh---------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeC
Confidence 1 0011234699999999999987732 232 24568999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
+ + ++|+|||.......... ...+... ..++.++|+|+||+++.-+
T Consensus 171 ~-------g-i~liDfg~~~~~~e~~a----------------------~d~~vle----r~y~~~~di~~lg~~~~~~ 215 (232)
T PRK10359 171 N-------G-LRIIDLSGKRCTAQRKA----------------------KDRIDLE----RHYGIKNEIKDLGYYLLIY 215 (232)
T ss_pred C-------C-EEEEECCCcccccchhh----------------------HHHHHHH----hHhcccccccceeEeehHH
Confidence 6 6 99999998754321100 0112222 3456799999999988754
No 435
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.75 E-value=3.3e-19 Score=209.39 Aligned_cols=237 Identities=23% Similarity=0.274 Sum_probs=181.3
Q ss_pred eecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCCCC
Q 001143 813 EAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 813 ~LG~GsfG~Vy~a~~-----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~~~~~ 886 (1141)
++|+|+||.|++++. .+..++.|+.+.......... . ...|..++..++ ||.+|++.-.+..+...
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~--~----t~~er~il~~~~~~~f~v~lhyafqt~~kl-- 72 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT--H----TKQERIILAFVHNTPFLVKLHYAFQTDGKL-- 72 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc--c----cccHHHHHhhccCCCceeeeeeeeccccch--
Confidence 479999999998753 455566666332211111111 1 146778888886 99999999888876644
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
+++++|..||.|...+.. ...+++.....+...++-|++++|+.+|+|||+|++||+++.+
T Consensus 73 ------------~l~ld~~rgg~lft~l~~-----~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~-- 133 (612)
T KOG0603|consen 73 ------------YLILDFLRGGDLFTRLSK-----EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLE-- 133 (612)
T ss_pred ------------hHhhhhcccchhhhcccc-----CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeeccc--
Confidence 999999999999887765 3468888888899999999999999999999999999999998
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1046 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk 1046 (1141)
|++++.|||.++..-... ..+||..|||||++.+ ....+|.||||++.+||+||.
T Consensus 134 -----Ghi~~tdfglske~v~~~--------------~~cgt~eymApEI~~g------h~~a~D~ws~gvl~felltg~ 188 (612)
T KOG0603|consen 134 -----GHIKLTDFGLSKEAVKEK--------------IACGTYEYRAPEIING------HLSAADWWSFGVLAFELLTGT 188 (612)
T ss_pred -----CccccCCchhhhHhHhhh--------------hcccchhhhhhHhhhc------cCCcccchhhhhhHHHHhhCC
Confidence 899999999987643311 1168999999999974 358999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC-----
Q 001143 1047 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT----- 1121 (1141)
Q Consensus 1047 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS----- 1121 (1141)
.||.. ++...|.....+. + ......+++++..++..+|..|.-
T Consensus 189 ~pf~~----~~~~~Il~~~~~~-p---------------------------~~l~~~a~~~~~~l~~r~p~nrLg~~~~~ 236 (612)
T KOG0603|consen 189 LPFGG----DTMKRILKAELEM-P---------------------------RELSAEARSLFRQLFKRNPENRLGAGPDG 236 (612)
T ss_pred CCCch----HHHHHHhhhccCC-c---------------------------hhhhHHHHHHHHHHHhhCHHHHhccCcch
Confidence 99986 4455553322211 1 145566889999999999999954
Q ss_pred HHHHHHHHHhhc
Q 001143 1122 AGDLYEMFVART 1133 (1141)
Q Consensus 1122 a~ElL~~L~~~~ 1133 (1141)
+.|+.+|.++..
T Consensus 237 ~~eik~h~f~~~ 248 (612)
T KOG0603|consen 237 VDEIKQHEFFQS 248 (612)
T ss_pred hHHHhccchhee
Confidence 477888877753
No 436
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.75 E-value=1.3e-17 Score=177.18 Aligned_cols=146 Identities=14% Similarity=0.133 Sum_probs=109.3
Q ss_pred eeeecccCceEEEEEEEC-CccEEEEEEecccCCCChH------------------HHHHhHHhHHHHHHHHhhCCCCCc
Q 001143 811 CDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSAD------------------EIRNFEYSCLGEVRMLGALRHSCI 871 (1141)
Q Consensus 811 ~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~------------------~~~~~~~~~~~Ei~iL~~L~HpNI 871 (1141)
.+.||+|++|.||+|.+. +..||+|+.+......... ........+..|+..+.++.|++|
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 578999999999999974 8899999876542211000 001112234689999999999988
Q ss_pred cceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHH-HHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCc
Q 001143 872 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNY-IEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHI 949 (1141)
Q Consensus 872 Vkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~-I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gI 949 (1141)
.....+.... .++||||++|+++... +.. ..++...+..++.|++.++.++|+ +||
T Consensus 82 ~~p~~~~~~~----------------~~lVmE~~~g~~~~~~~l~~------~~~~~~~~~~i~~~l~~~l~~lH~~~gi 139 (190)
T cd05145 82 PVPEPILLKK----------------NVLVMEFIGDDGSPAPRLKD------VPLEEEEAEELYEQVVEQMRRLYQEAGL 139 (190)
T ss_pred CCceEEEecC----------------CEEEEEEecCCCchhhhhhh------ccCCHHHHHHHHHHHHHHHHHHHHhCCE
Confidence 5544443221 2899999998755433 332 357889999999999999999999 999
Q ss_pred cccCCCCCCeeeecccccCCCCCeEEEeecccccccc
Q 001143 950 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLR 986 (1141)
Q Consensus 950 vHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~ 986 (1141)
+||||||+||+++ + +.++|+|||+|....
T Consensus 140 vHrDlkP~NIll~-~-------~~~~liDFG~a~~~~ 168 (190)
T cd05145 140 VHGDLSEYNILYH-D-------GKPYIIDVSQAVELD 168 (190)
T ss_pred ecCCCChhhEEEE-C-------CCEEEEEcccceecC
Confidence 9999999999998 4 689999999997543
No 437
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.73 E-value=6.4e-17 Score=214.08 Aligned_cols=254 Identities=22% Similarity=0.219 Sum_probs=172.0
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecC-CCCccCccccCCcCCcEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKN-VLNLIPKSVGRYEKLRNL 96 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N-~Lt~iP~~l~~L~~L~~L 96 (1141)
.+..|.+..+.++.++.. | ...+|+.|+|++|+|... +..+ ..+++|+.|+|++| .++.+|. +..+++|+.|
T Consensus 590 ~Lr~L~~~~~~l~~lP~~-f-~~~~L~~L~L~~s~l~~L-~~~~---~~l~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L 662 (1153)
T PLN03210 590 KLRLLRWDKYPLRCMPSN-F-RPENLVKLQMQGSKLEKL-WDGV---HSLTGLRNIDLRGSKNLKEIPD-LSMATNLETL 662 (1153)
T ss_pred ccEEEEecCCCCCCCCCc-C-CccCCcEEECcCcccccc-cccc---ccCCCCCEEECCCCCCcCcCCc-cccCCcccEE
Confidence 466666667777766543 3 456778888888777643 3323 34477788888765 3566763 6677778888
Q ss_pred EccCCC-CCcCchhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCC
Q 001143 97 KFFGNE-INLFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1141)
Q Consensus 97 ~Ls~N~-L~~lP~~~~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1141)
+|++|. +..+|..+++|++|+.|+|++|. ++.+|..+ ++++|+.|+++++. ....+|.. ..+|+.|++++|
T Consensus 663 ~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~---~L~~~p~~---~~nL~~L~L~~n 735 (1153)
T PLN03210 663 KLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCS---RLKSFPDI---STNISWLDLDET 735 (1153)
T ss_pred EecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCC---Cccccccc---cCCcCeeecCCC
Confidence 887754 45777777778888888887754 66666544 67777777777743 23333322 345667777777
Q ss_pred CCCccCccc------------------------------cCCCCCCEEEccCCc-cccccccccCCCCCCEEEccCC-CC
Q 001143 175 SIRYLPPEI------------------------------GCLSNLEQLDLSFNK-MKYLPTEICYLKALISLKVANN-KL 222 (1141)
Q Consensus 175 ~L~~iP~~l------------------------------~~l~~L~~L~Ls~N~-L~~iP~~l~~l~~L~~L~Ls~N-~L 222 (1141)
.+..+|..+ ..+++|+.|+|++|. +..+|.+++++++|+.|+|++| .|
T Consensus 736 ~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L 815 (1153)
T PLN03210 736 AIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINL 815 (1153)
T ss_pred ccccccccccccccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCc
Confidence 766666432 113467778888875 4478888888999999999886 57
Q ss_pred CcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCC
Q 001143 223 VELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSN 292 (1141)
Q Consensus 223 ~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~ 292 (1141)
+.||..+ ++++|+.|+|++|..-...|. ...+|+.|+|++|.+.. +|.++..+..+..+.+.+
T Consensus 816 ~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~---~~~nL~~L~Ls~n~i~~---iP~si~~l~~L~~L~L~~ 878 (1153)
T PLN03210 816 ETLPTGI-NLESLESLDLSGCSRLRTFPD---ISTNISDLNLSRTGIEE---VPWWIEKFSNLSFLDMNG 878 (1153)
T ss_pred CeeCCCC-CccccCEEECCCCCccccccc---cccccCEeECCCCCCcc---ChHHHhcCCCCCEEECCC
Confidence 7888766 688888888888644333332 23578888888888875 788777666666666655
No 438
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.72 E-value=5.4e-17 Score=172.62 Aligned_cols=201 Identities=13% Similarity=0.049 Sum_probs=136.6
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~~~~~~ 887 (1141)
.+...|++|+||+||.+...+..++.+-+... ......-+..++.+|+++|++|. |++|++++++.
T Consensus 5 ~~~~~l~~~~f~~v~~~~~~~~k~~~~~l~~~----~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~--------- 71 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRGGERKFVRRDLSAA----PWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD--------- 71 (218)
T ss_pred ccceeecCCCcceEEEeecCCceeeecccccc----hhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc---------
Confidence 56789999999999988876666554443221 11111111224589999999995 68899998862
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC-CCCCeeeecccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI-KSENILIDLERK 966 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDL-KP~NILld~~~~ 966 (1141)
..+++|||+.|.+|...+.. . ...++.|++.+|.++|++||+|||| ||+|||++.+
T Consensus 72 ---------~~~lvmeyI~G~~L~~~~~~-----------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~-- 128 (218)
T PRK12274 72 ---------GRHLDRSYLAGAAMYQRPPR-----------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQED-- 128 (218)
T ss_pred ---------CEEEEEeeecCccHHhhhhh-----------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCC--
Confidence 13899999999998754321 1 1347789999999999999999999 7999999876
Q ss_pred cCCCCCeEEEeeccccccccccccccc-cccCCC--CCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCC-IAHRGI--PAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~-~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+.++|+|||+|........... ...+.. -.......++.|++|+...-.. ..--...+.++-|+-+|.++
T Consensus 129 -----g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~--~~~~~~~~w~~~g~~~~~~~ 201 (218)
T PRK12274 129 -----GSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLK--RTSWIRELWFATGKPVYRFV 201 (218)
T ss_pred -----CCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhc--cchhHHHHHHHhcchHHHHH
Confidence 7899999999975432211000 000000 0000123578888888654311 11126778999999999999
Q ss_pred hCCCCCCCC
Q 001143 1044 TLQVPYMGL 1052 (1141)
Q Consensus 1044 TGk~Pf~~~ 1052 (1141)
|+..|+.++
T Consensus 202 ~~~~~~~~~ 210 (218)
T PRK12274 202 TRRVLHWED 210 (218)
T ss_pred hccCCcccc
Confidence 999887653
No 439
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.72 E-value=1.2e-16 Score=211.58 Aligned_cols=258 Identities=20% Similarity=0.233 Sum_probs=189.8
Q ss_pred CcccccCCCCC------ccccCCCCCCCCC-CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCC
Q 001143 18 IKEKLPSEANK------INNEKNGSVNDDD-DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRY 90 (1141)
Q Consensus 18 ~l~~L~~~~N~------i~~i~~~~f~~l~-~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L 90 (1141)
++..|.+..+. ++...+..|..++ +|+.|++.+|.++..+ ..| .+.+|+.|+|++|+|..+|..+..+
T Consensus 559 ~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~~lP-~~f----~~~~L~~L~L~~s~l~~L~~~~~~l 633 (1153)
T PLN03210 559 NLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLRCMP-SNF----RPENLVKLQMQGSKLEKLWDGVHSL 633 (1153)
T ss_pred cccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCCCCC-CcC----CccCCcEEECcCccccccccccccC
Confidence 56666664432 3333345566654 6999999999887554 434 2378999999999999999888899
Q ss_pred cCCcEEEccCCC-CCcCchhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcE
Q 001143 91 EKLRNLKFFGNE-INLFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTK 168 (1141)
Q Consensus 91 ~~L~~L~Ls~N~-L~~lP~~~~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~ 168 (1141)
++|+.|+|++|. ++.+|. ++.+++|+.|+|++|. +..+|..+.++++|+.|+++++ +....+|..+ ++++|+.
T Consensus 634 ~~Lk~L~Ls~~~~l~~ip~-ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c---~~L~~Lp~~i-~l~sL~~ 708 (1153)
T PLN03210 634 TGLRNIDLRGSKNLKEIPD-LSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRC---ENLEILPTGI-NLKSLYR 708 (1153)
T ss_pred CCCCEEECCCCCCcCcCCc-cccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCC---CCcCccCCcC-CCCCCCE
Confidence 999999998764 677874 8889999999999876 7888888999999999999983 4455667655 7889999
Q ss_pred EEccCCC-CCccCccccCCCCCCEEEccCCcccccccccc------------------------------CCCCCCEEEc
Q 001143 169 LSVCHFS-IRYLPPEIGCLSNLEQLDLSFNKMKYLPTEIC------------------------------YLKALISLKV 217 (1141)
Q Consensus 169 L~Ls~N~-L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~------------------------------~l~~L~~L~L 217 (1141)
|+|++|. +..+|.. +++|++|+|++|.|+.+|..+. ..++|+.|+|
T Consensus 709 L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~L 785 (1153)
T PLN03210 709 LNLSGCSRLKSFPDI---STNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFL 785 (1153)
T ss_pred EeCCCCCCccccccc---cCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhhccccchheeC
Confidence 9999875 4466643 4688999999999888875431 1247888888
Q ss_pred cCCCC-CcCCcCccCCCCCCEEeCCCC-CCCCCCcccccCCCCCCEEEccCCc-CCCCCCCchhhhhcccCCCCCCCCCC
Q 001143 218 ANNKL-VELPSGLYLLQRLENLDLSNN-RLTSLGSLDLCLMHNLQNLNLQYNK-LLSYCQVPSWICCNLEGNGKDSSNDD 294 (1141)
Q Consensus 218 s~N~L-~~IP~~l~~L~~L~~L~Ls~N-~Lt~~~p~~l~~L~~L~~L~Ls~N~-L~~~~~iP~~~~~~l~~~~l~~~~n~ 294 (1141)
++|.. ..+|.++++|++|+.|+|++| .|+.+ |..+ ++++|+.|+|++|. +.. +|... .....+.++++.
T Consensus 786 s~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~L-P~~~-~L~sL~~L~Ls~c~~L~~---~p~~~---~nL~~L~Ls~n~ 857 (1153)
T PLN03210 786 SDIPSLVELPSSIQNLHKLEHLEIENCINLETL-PTGI-NLESLESLDLSGCSRLRT---FPDIS---TNISDLNLSRTG 857 (1153)
T ss_pred CCCCCccccChhhhCCCCCCEEECCCCCCcCee-CCCC-CccccCEEECCCCCcccc---ccccc---cccCEeECCCCC
Confidence 88854 589999999999999999986 45554 4333 78999999999864 333 44322 233445555555
Q ss_pred cc
Q 001143 295 FI 296 (1141)
Q Consensus 295 l~ 296 (1141)
+.
T Consensus 858 i~ 859 (1153)
T PLN03210 858 IE 859 (1153)
T ss_pred Cc
Confidence 54
No 440
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.72 E-value=1.6e-19 Score=200.42 Aligned_cols=247 Identities=19% Similarity=0.213 Sum_probs=174.5
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEEEccC-CCCCcCchh-hcCCCCCCE
Q 001143 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNLKFFG-NEINLFPSE-VGNLLGLEC 118 (1141)
Q Consensus 42 ~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L~Ls~-N~L~~lP~~-~~~L~~L~~ 118 (1141)
.-+.|+|..|+|+.+++..|+.+ ++|++||||+|.|+.| |++|..|++|..|-|.+ |+|+.||.. |++|..|+.
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l---~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqr 144 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTL---HRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQR 144 (498)
T ss_pred cceEEEeccCCcccCChhhccch---hhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHH
Confidence 45677888888887777666544 8888888888888877 66788888766555544 888888765 777888888
Q ss_pred EEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchh-hhcCCCCCcEEEccCCCCC-------------ccCccc
Q 001143 119 LQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLS-EIAGLKCLTKLSVCHFSIR-------------YLPPEI 183 (1141)
Q Consensus 119 L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~lp~-~l~~L~~L~~L~Ls~N~L~-------------~iP~~l 183 (1141)
|.+.-|++.-+. ..|..|++|..|.+.+|.++ .++. .|..+..++.+.+..|.+- ..|..+
T Consensus 145 LllNan~i~Cir~~al~dL~~l~lLslyDn~~q----~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~iet 220 (498)
T KOG4237|consen 145 LLLNANHINCIRQDALRDLPSLSLLSLYDNKIQ----SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIET 220 (498)
T ss_pred HhcChhhhcchhHHHHHHhhhcchhcccchhhh----hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhc
Confidence 888777766554 56888888888888875543 3333 5677777777777777621 112222
Q ss_pred cCCCCCCEEEc--------------------------cCCcccccc-ccccCCCCCCEEEccCCCCCcC-CcCccCCCCC
Q 001143 184 GCLSNLEQLDL--------------------------SFNKMKYLP-TEICYLKALISLKVANNKLVEL-PSGLYLLQRL 235 (1141)
Q Consensus 184 ~~l~~L~~L~L--------------------------s~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L 235 (1141)
+...-..-..| ..+.....| ..|..|++|++|+|++|+|+.| +.+|..+..|
T Consensus 221 sgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l 300 (498)
T KOG4237|consen 221 SGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAEL 300 (498)
T ss_pred ccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhh
Confidence 22211111111 122222334 3467799999999999999988 6677789999
Q ss_pred CEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCccc
Q 001143 236 ENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFIS 297 (1141)
Q Consensus 236 ~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~ 297 (1141)
+.|+|..|+|..+....|.++..|+.|+|.+|+|+++ -|..+....+...+.+..|.|+|
T Consensus 301 ~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~--~~~aF~~~~~l~~l~l~~Np~~C 360 (498)
T KOG4237|consen 301 QELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTV--APGAFQTLFSLSTLNLLSNPFNC 360 (498)
T ss_pred hhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEE--ecccccccceeeeeehccCcccC
Confidence 9999999999999888999999999999999999984 45555555555556655555554
No 441
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.69 E-value=1.3e-18 Score=200.30 Aligned_cols=201 Identities=30% Similarity=0.392 Sum_probs=125.5
Q ss_pred EEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCC
Q 001143 46 IDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISS 125 (1141)
Q Consensus 46 LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~ 125 (1141)
|.|++-++...+-..+. -.|+-....||+.|++.++|..+..+..|+.|.|+.|.|..||..+++|..|+.|+|+.|+
T Consensus 55 l~Ls~rrlk~fpr~a~~--~~ltdt~~aDlsrNR~~elp~~~~~f~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ls~Nq 132 (722)
T KOG0532|consen 55 LLLSGRRLKEFPRGAAS--YDLTDTVFADLSRNRFSELPEEACAFVSLESLILYHNCIRTIPEAICNLEALTFLDLSSNQ 132 (722)
T ss_pred cccccchhhcCCCcccc--ccccchhhhhccccccccCchHHHHHHHHHHHHHHhccceecchhhhhhhHHHHhhhccch
Confidence 44455444433322221 2334445556666666666655555555555666666666666655555555555555555
Q ss_pred CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCcccccccc
Q 001143 126 PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTE 205 (1141)
Q Consensus 126 l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~ 205 (1141)
+..+| ..++.|+ |+.|-+++|+++.+|..++.+..|..|+.+.|+|.++|..
T Consensus 133 lS~lp---------------------------~~lC~lp-Lkvli~sNNkl~~lp~~ig~~~tl~~ld~s~nei~slpsq 184 (722)
T KOG0532|consen 133 LSHLP---------------------------DGLCDLP-LKVLIVSNNKLTSLPEEIGLLPTLAHLDVSKNEIQSLPSQ 184 (722)
T ss_pred hhcCC---------------------------hhhhcCc-ceeEEEecCccccCCcccccchhHHHhhhhhhhhhhchHH
Confidence 44444 3444554 6677777777777777777666777777777777777777
Q ss_pred ccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhh
Q 001143 206 ICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICC 281 (1141)
Q Consensus 206 l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~ 281 (1141)
++.+.+|+.|.+..|++..+|.++..|+ |..||+|+|+++.+| ..|..|..|++|-|.+|+|+. -|..+|.
T Consensus 185 l~~l~slr~l~vrRn~l~~lp~El~~Lp-Li~lDfScNkis~iP-v~fr~m~~Lq~l~LenNPLqS---PPAqIC~ 255 (722)
T KOG0532|consen 185 LGYLTSLRDLNVRRNHLEDLPEELCSLP-LIRLDFSCNKISYLP-VDFRKMRHLQVLQLENNPLQS---PPAQICE 255 (722)
T ss_pred hhhHHHHHHHHHhhhhhhhCCHHHhCCc-eeeeecccCceeecc-hhhhhhhhheeeeeccCCCCC---ChHHHHh
Confidence 7777777777777777777777777554 777777777777654 367777777777777777766 5666663
No 442
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.69 E-value=2.4e-17 Score=201.67 Aligned_cols=161 Identities=28% Similarity=0.327 Sum_probs=122.9
Q ss_pred HHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccc-----cCCCCCCCCccCCCccc
Q 001143 938 AAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-----HRGIPAPDVCVGTPRWM 1012 (1141)
Q Consensus 938 a~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-----~~~~~~~~~~~GT~~Y~ 1012 (1141)
+.+++|||+.||+|||+||+|.+|+.- |++|+.|||+.+.......++..+ ..........+||+.|+
T Consensus 153 vla~Eylh~ygivhrdlkpdnllIT~m-------GhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyi 225 (1205)
T KOG0606|consen 153 VLAVEYLHSYGIVHRDLKPDNLLITSM-------GHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYI 225 (1205)
T ss_pred hHHhHhhccCCeecCCCCCCcceeeec-------ccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCcccc
Confidence 789999999999999999999999987 899999999987532111111000 01112334567999999
Q ss_pred chhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCC
Q 001143 1013 APEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE 1092 (1141)
Q Consensus 1013 APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~ 1092 (1141)
|||++.. ..|+..+|+|++|+|+||.+.|+.||.++.+.+++..+.......
T Consensus 226 aPeVilr----qgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~w------------------------ 277 (1205)
T KOG0606|consen 226 APEVILR----QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEW------------------------ 277 (1205)
T ss_pred Chhhhhh----hccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccc------------------------
Confidence 9999986 568999999999999999999999999999999887764432211
Q ss_pred CchhhhhhHHHHHHHHHHhcccCCCCC---CCHHHHHHHHHhhcC
Q 001143 1093 KPEAELETLSFLVDVFRRCTEENPTER---PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1093 ~~~~~~~~~~~L~dLI~~cL~~DP~~R---PSa~ElL~~L~~~~~ 1134 (1141)
++.....+.++++++.++|+.+|..| +.+-+|.+|-+|+.-
T Consensus 278 -pE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~L 321 (1205)
T KOG0606|consen 278 -PEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLL 321 (1205)
T ss_pred -cccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeec
Confidence 11112456779999999999999999 567778888777643
No 443
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.69 E-value=4e-16 Score=167.55 Aligned_cols=142 Identities=20% Similarity=0.234 Sum_probs=111.9
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
+.||+|++|.||+|.+.+..+++|+..................++.+|+.++..+.|++|+....++.....
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~-------- 73 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPEN-------- 73 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCC--------
Confidence 679999999999999988899999865332222111112122345789999999999998877766654332
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 971 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~ 971 (1141)
.++||||++|++|.+++.. ... ....++.+++.+|.++|+.|++|||++|.|||++ +
T Consensus 74 ------~~lv~e~~~G~~L~~~~~~--------~~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~------- 130 (211)
T PRK14879 74 ------FIIVMEYIEGEPLKDLINS--------NGM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-G------- 130 (211)
T ss_pred ------CEEEEEEeCCcCHHHHHHh--------ccH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-C-------
Confidence 3899999999999999865 112 7889999999999999999999999999999998 4
Q ss_pred CeEEEeecccccc
Q 001143 972 PVVKLCDFDRAVP 984 (1141)
Q Consensus 972 ~~vKL~DFGlA~~ 984 (1141)
+.++|+|||.+..
T Consensus 131 ~~~~liDf~~a~~ 143 (211)
T PRK14879 131 GKIYLIDFGLAEF 143 (211)
T ss_pred CCEEEEECCcccC
Confidence 6799999998854
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.68 E-value=3.2e-16 Score=168.80 Aligned_cols=144 Identities=14% Similarity=0.135 Sum_probs=102.6
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-----CCCCccceeeeEecCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-----RHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-----~HpNIVkllg~~~~~~~ 883 (1141)
.-.+.||+|+||.||. .-.....++|+..... ....+. +.+|+.+++++ .||||++++|++.++..
T Consensus 5 ~~~~~LG~G~~~~Vy~-hp~~~~k~IKv~~~~~----~~~~~~----~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g 75 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA-HPEDAQRCIKIVYHRG----DGGDKE----IRRELKYYAHLSRRLIDWSGIPRYYGTVETDCG 75 (210)
T ss_pred CCcceecCCCceEEEE-CCCCcCeEEEEEeccc----cchHHH----HHHHHHHHHHhhccCCCCcccceeeEEEEeCCC
Confidence 3457899999999996 2122334566654321 112223 48999999999 57999999999987531
Q ss_pred CCCCCCCCccccceEEEEEee--ccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHH-HHHHHCCccccCCCCCCee
Q 001143 884 LPSADGNPEHHLLQSAIFMEY--VKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAAL-VELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy--~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL-~yLHs~gIvHrDLKP~NIL 960 (1141)
. .....+|||| +++++|.+++.+ ..+++. ..++.|++.++ +|||+++|+||||||+|||
T Consensus 76 ~----------g~v~~~I~e~~G~~~~tL~~~l~~------~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NIL 137 (210)
T PRK10345 76 T----------GYVYDVIADFDGKPSITLTEFAEQ------CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNIL 137 (210)
T ss_pred C----------eEEEEEEecCCCCcchhHHHHHHc------ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEE
Confidence 0 1123489999 557999999965 135555 35678888887 9999999999999999999
Q ss_pred eecccccCCCCCeEEEeecccc
Q 001143 961 IDLERKKADGKPVVKLCDFDRA 982 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA 982 (1141)
++..+ .+...++|+||+.+
T Consensus 138 l~~~~---~~~~~~~LiDg~G~ 156 (210)
T PRK10345 138 CQRIS---ESEVIPVVCDNIGE 156 (210)
T ss_pred EeccC---CCCCcEEEEECCCC
Confidence 97542 12258999995433
No 445
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.67 E-value=2.4e-16 Score=185.75 Aligned_cols=214 Identities=26% Similarity=0.353 Sum_probs=159.0
Q ss_pred HhhCCCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 001143 863 LGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALV 942 (1141)
Q Consensus 863 L~~L~HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~ 942 (1141)
|+.+.|.|+.+++|.+.+.. ..++|.+||..|+|.+.+.. ....+++.-...++++|+.||+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~--------------~~~~i~~~c~rGsl~D~i~~----~~~~~d~~F~~s~~rdi~~Gl~ 62 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP--------------EMIVIWEYCSRGSLLDILSN----EDIKLDYFFILSFIRDISKGLA 62 (484)
T ss_pred CcccchhhhhhheeeEecCC--------------ceEEEEeeecCccHHhHHhc----cccCccHHHHHHHHHHHHHHHH
Confidence 35788999999999988654 45999999999999999976 3456899999999999999999
Q ss_pred HHHHCCc-cccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc
Q 001143 943 ELHSKHI-MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH 1021 (1141)
Q Consensus 943 yLHs~gI-vHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1021 (1141)
|||...| .|+.+++.|.+++.. +.+||.|||+.......... .......-..-|.|||.+.+..
T Consensus 63 ylh~s~i~~hg~l~s~nClvd~~-------w~lklt~~Gl~~~~~~~~~~--------~~~~~~~~~~lw~aPellr~~~ 127 (484)
T KOG1023|consen 63 YLHNSPIGYHGALKSSNCLVDSR-------WVLKLTDFGLNSLLEETAEP--------EAHHPIRKALLWTAPELLRGAL 127 (484)
T ss_pred HHhcCcceeeeeeccccceeeee-------EEEEechhhhcccccccccc--------cccchhHHHHhccCHHHhcccc
Confidence 9998765 999999999999988 99999999998665321000 0001112345699999998743
Q ss_pred CCCC---CCchhhHHHHHHHHHHHHhCCCCCCCC----CHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCC
Q 001143 1022 KPNL---YGLEVDIWSYGCLLLELLTLQVPYMGL----SELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEK 1093 (1141)
Q Consensus 1022 ~~~~---~s~ksDVWSLGviL~ELLTGk~Pf~~~----~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~ 1093 (1141)
.... .+++.||||||++++|+++.+.||... ...++...+..+.. +..+.. ..
T Consensus 128 ~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i-~~------------------ 188 (484)
T KOG1023|consen 128 SQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSI-EL------------------ 188 (484)
T ss_pred cccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcch-hh------------------
Confidence 2222 578899999999999999999999752 23345555544222 111111 00
Q ss_pred chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1094 PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1094 ~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
. ....+++..++..||..+|.+||+++++-..+.-
T Consensus 189 --~-~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~ 223 (484)
T KOG1023|consen 189 --L-NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLT 223 (484)
T ss_pred --h-hhcchHHHHHHHHhcccChhhCccHHHHHhhhhh
Confidence 0 0333468899999999999999999998766543
No 446
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.66 E-value=1.2e-15 Score=162.41 Aligned_cols=138 Identities=21% Similarity=0.268 Sum_probs=105.3
Q ss_pred eecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCCc
Q 001143 813 EAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNPE 892 (1141)
Q Consensus 813 ~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~~ 892 (1141)
.||+|++|.||+|.+.+..+++|++..+.......+...-..++.+|++++..++|+++.....++.....
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~--------- 71 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDN--------- 71 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC---------
Confidence 48999999999999999999999865332211111111112455789999999998876555444443322
Q ss_pred cccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCC
Q 001143 893 HHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKP 972 (1141)
Q Consensus 893 ~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~ 972 (1141)
.++||||++|++|.+++.. .. . .++.|++.+|.+||+.|++|||++|.||+++ + +
T Consensus 72 -----~~lv~e~~~g~~l~~~~~~-----~~-~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~-------~ 126 (199)
T TIGR03724 72 -----KTIVMEYIEGKPLKDVIEE-----GN-D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-D-------D 126 (199)
T ss_pred -----CEEEEEEECCccHHHHHhh-----cH-H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-C-------C
Confidence 3899999999999988754 11 1 7899999999999999999999999999998 4 6
Q ss_pred eEEEeecccccc
Q 001143 973 VVKLCDFDRAVP 984 (1141)
Q Consensus 973 ~vKL~DFGlA~~ 984 (1141)
.++++|||.+..
T Consensus 127 ~~~liDfg~a~~ 138 (199)
T TIGR03724 127 KLYLIDFGLGKY 138 (199)
T ss_pred cEEEEECCCCcC
Confidence 799999998854
No 447
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65 E-value=7.1e-16 Score=192.93 Aligned_cols=201 Identities=18% Similarity=0.238 Sum_probs=148.4
Q ss_pred CCCceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC---CCCccceeeeEec
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEMYGHKIS 880 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~---HpNIVkllg~~~~ 880 (1141)
-..|.|.+.||+|+||.||+|.. ++..+|+|+-+-.. .-+ | .--.+++.+|+ -+.|..+...+.-
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~---~WE----f----YI~~q~~~RLk~~~~~~~~~~~~a~~~ 765 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPN---PWE----F----YICLQVMERLKPQMLPSIMHISSAHVF 765 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCC---cee----e----eehHHHHHhhchhhhcchHHHHHHHcc
Confidence 45689999999999999999986 56778888743221 100 0 01112333343 2345555544432
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.+ ..++|+||.+-|+|.+++.. .+.+++..+..++.|++.-+++||..+||||||||+|+|
T Consensus 766 ~~--------------~S~lv~ey~~~Gtlld~~N~-----~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfl 826 (974)
T KOG1166|consen 766 QN--------------ASVLVSEYSPYGTLLDLINT-----NKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFL 826 (974)
T ss_pred CC--------------cceeeeeccccccHHHhhcc-----CCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeE
Confidence 22 23899999999999999973 567999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
|......+.+...++|+|||.+..+.-..... .-....+|-.+-.+|+..| ..|+..+|.|.++.+++
T Consensus 827 l~~~~~~~~~~~~l~lIDfG~siDm~lfp~~~--------~F~~~~~td~f~C~EM~~g----rpWtYq~DyfGlAa~~h 894 (974)
T KOG1166|consen 827 LRREICADSDSKGLYLIDFGRSIDMKLFPDGT--------KFKAVWHTDLFDCIEMREG----RPWTYQIDYFGLAATVH 894 (974)
T ss_pred eecccCCCCcccceEEEecccceeeeEcCCCc--------EEeeeeccccchhHHHhcC----CCCchhhhhHHHHHHHH
Confidence 97654333445679999999997654322110 0123457888999999887 78999999999999999
Q ss_pred HHHhCCC
Q 001143 1041 ELLTLQV 1047 (1141)
Q Consensus 1041 ELLTGk~ 1047 (1141)
-|+.|++
T Consensus 895 ~mLFG~y 901 (974)
T KOG1166|consen 895 VMLFGKY 901 (974)
T ss_pred HHHHHHH
Confidence 9999864
No 448
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.64 E-value=3.1e-17 Score=186.94 Aligned_cols=248 Identities=22% Similarity=0.194 Sum_probs=178.7
Q ss_pred cccCCCCCcc-ccCCCCCCCCCCCCEEEccCCCCCCC----CcccccCCCCCCCccEEEeecCCCCc-------cCcccc
Q 001143 21 KLPSEANKIN-NEKNGSVNDDDDDSVIDVSGKTVDFP----LIESYGNRGGDNSVEGLYLYKNVLNL-------IPKSVG 88 (1141)
Q Consensus 21 ~L~~~~N~i~-~i~~~~f~~l~~L~~LdLs~N~Ls~~----~p~~~~~l~~L~~L~~L~Ls~N~Lt~-------iP~~l~ 88 (1141)
.|.+..++++ .-....|..+.+|+.|+|+++.++.. ++..+ ...++|++|+++.|.+.. ++..+.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l---~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~ 78 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASAL---RPQPSLKELCLSLNETGRIPRGLQSLLQGLT 78 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHH---hhCCCceEEeccccccCCcchHHHHHHHHHH
Confidence 3566666766 33345566777899999999998653 23333 344779999999987763 234567
Q ss_pred CCcCCcEEEccCCCCC-cCchhhcCCCC---CCEEEccCCCCCC-----CcccccCC-CCCCEEECCCCCCCCCc-ccch
Q 001143 89 RYEKLRNLKFFGNEIN-LFPSEVGNLLG---LECLQIKISSPGV-----NGFALNKL-KGLKELELSKVPPRPSV-LTLL 157 (1141)
Q Consensus 89 ~L~~L~~L~Ls~N~L~-~lP~~~~~L~~---L~~L~Ls~N~l~~-----~~~~~~~L-~~L~~L~Ls~N~ln~~~-~~lp 157 (1141)
.+++|+.|+|++|.+. ..+..+..+.+ |+.|++++|.+.. +...+..+ ++|+.|++++|.+.... ..++
T Consensus 79 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~ 158 (319)
T cd00116 79 KGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALA 158 (319)
T ss_pred hcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHH
Confidence 7889999999999997 44555655555 9999999998663 22345666 88999999997765321 2345
Q ss_pred hhhcCCCCCcEEEccCCCCC-----ccCccccCCCCCCEEEccCCccc-----cccccccCCCCCCEEEccCCCCCcC-C
Q 001143 158 SEIAGLKCLTKLSVCHFSIR-----YLPPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLVEL-P 226 (1141)
Q Consensus 158 ~~l~~L~~L~~L~Ls~N~L~-----~iP~~l~~l~~L~~L~Ls~N~L~-----~iP~~l~~l~~L~~L~Ls~N~L~~I-P 226 (1141)
..+..+++|+.|++++|.++ .++..+..+++|++|+|++|.|+ .++..+..+++|+.|++++|.++.. +
T Consensus 159 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~ 238 (319)
T cd00116 159 KALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGA 238 (319)
T ss_pred HHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHH
Confidence 56777888999999999988 23445666789999999999987 3345667788999999999998731 2
Q ss_pred cCcc-----CCCCCCEEeCCCCCCCCC----CcccccCCCCCCEEEccCCcCCC
Q 001143 227 SGLY-----LLQRLENLDLSNNRLTSL----GSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 227 ~~l~-----~L~~L~~L~Ls~N~Lt~~----~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
..+. ..++|+.|++++|.++.. ....+..+++|+.|++++|+++.
T Consensus 239 ~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 239 AALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 2222 247899999999998722 12345667899999999999875
No 449
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.64 E-value=1.5e-15 Score=186.17 Aligned_cols=145 Identities=20% Similarity=0.224 Sum_probs=112.8
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
...|...+.||+|+||+||++.+.+..+++|++..+..............++.+|++++.+++|++++....+..+...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~- 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE- 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC-
Confidence 3445778999999999999999988777777654332211111111223456899999999999999887766654332
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
.++||||++|++|.+++. ....++.|++.+|.|||+.||+||||||+|||++ +
T Consensus 411 -------------~~lv~E~~~g~~L~~~l~-------------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~-~ 463 (535)
T PRK09605 411 -------------KTIVMEYIGGKDLKDVLE-------------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR-D 463 (535)
T ss_pred -------------CEEEEEecCCCcHHHHHH-------------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE-C
Confidence 389999999999998875 2457899999999999999999999999999994 3
Q ss_pred cccCCCCCeEEEeecccccc
Q 001143 965 RKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~ 984 (1141)
+.++|+|||+++.
T Consensus 464 -------~~~~liDFGla~~ 476 (535)
T PRK09605 464 -------DRLYLIDFGLGKY 476 (535)
T ss_pred -------CcEEEEeCccccc
Confidence 5799999999864
No 450
>smart00090 RIO RIO-like kinase.
Probab=99.63 E-value=1.3e-15 Score=167.50 Aligned_cols=146 Identities=14% Similarity=0.187 Sum_probs=108.0
Q ss_pred ceEeeeecccCceEEEEEE-E--CCccEEEEEEecccCCCCh----------------HHHHHhHHhHHHHHHHHhhCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCK-F--GSADAAAKVRTLKVCGSSA----------------DEIRNFEYSCLGEVRMLGALRH 868 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~-~--~~~~vAvKI~~l~~~~~~~----------------~~~~~~~~~~~~Ei~iL~~L~H 868 (1141)
|++.+.||+|++|.||+|. + .+..||+|+.+........ ...+.....+.+|+.++.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 6888999999999999998 3 6788999987643211000 0111122345789999999975
Q ss_pred C--CccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001143 869 S--CIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS 946 (1141)
Q Consensus 869 p--NIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs 946 (1141)
. .+.+++++ . ..++||||++|.+|...... ...+....+..++.||+.++.+||+
T Consensus 110 ~~i~~p~~~~~---~---------------~~~lV~E~~~g~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~LH~ 166 (237)
T smart00090 110 AGVPVPKPIAW---R---------------RNVLVMEFIGGDGLPAPRLK-----DVEPEEEEEFELYDDILEEMRKLYK 166 (237)
T ss_pred cCCCCCeeeEe---c---------------CceEEEEEecCCcccccccc-----cCCcchHHHHHHHHHHHHHHHHHHh
Confidence 3 33444432 1 12899999998888765422 2346667788999999999999999
Q ss_pred CC-ccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 947 KH-IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 947 ~g-IvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
+| |+||||||+||+++ + +.++|+|||.|..
T Consensus 167 ~g~iiH~Dikp~NIli~-~-------~~i~LiDFg~a~~ 197 (237)
T smart00090 167 EGELVHGDLSEYNILVH-D-------GKVVIIDVSQSVE 197 (237)
T ss_pred cCCEEeCCCChhhEEEE-C-------CCEEEEEChhhhc
Confidence 99 99999999999998 4 6799999998854
No 451
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.61 E-value=1.2e-16 Score=181.99 Aligned_cols=250 Identities=22% Similarity=0.197 Sum_probs=185.6
Q ss_pred EEEccCCCCC-CCCcccccCCCCCCCccEEEeecCCCC-----ccCccccCCcCCcEEEccCCCCCc-------Cchhhc
Q 001143 45 VIDVSGKTVD-FPLIESYGNRGGDNSVEGLYLYKNVLN-----LIPKSVGRYEKLRNLKFFGNEINL-------FPSEVG 111 (1141)
Q Consensus 45 ~LdLs~N~Ls-~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-----~iP~~l~~L~~L~~L~Ls~N~L~~-------lP~~~~ 111 (1141)
.|+|..+.++ ......+..+ ..|+.|+|+++.++ .++..+...++|+.|++++|.+.. ++..+.
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l---~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~ 78 (319)
T cd00116 2 QLSLKGELLKTERATELLPKL---LCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLT 78 (319)
T ss_pred ccccccCcccccchHHHHHHH---hhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHH
Confidence 5789999997 3344444434 78999999999995 466677888899999999998873 345678
Q ss_pred CCCCCCEEEccCCCCCC-CcccccCCCC---CCEEECCCCCCCC-CcccchhhhcCC-CCCcEEEccCCCCC-----ccC
Q 001143 112 NLLGLECLQIKISSPGV-NGFALNKLKG---LKELELSKVPPRP-SVLTLLSEIAGL-KCLTKLSVCHFSIR-----YLP 180 (1141)
Q Consensus 112 ~L~~L~~L~Ls~N~l~~-~~~~~~~L~~---L~~L~Ls~N~ln~-~~~~lp~~l~~L-~~L~~L~Ls~N~L~-----~iP 180 (1141)
.+++|+.|+|++|.+.. .+..+..+.+ |++|++++|.+.. ....+...+..+ ++|+.|++++|.++ .++
T Consensus 79 ~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~ 158 (319)
T cd00116 79 KGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALA 158 (319)
T ss_pred hcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHH
Confidence 89999999999999763 4445555555 9999999977653 122334456677 89999999999998 344
Q ss_pred ccccCCCCCCEEEccCCccc-----cccccccCCCCCCEEEccCCCCC-----cCCcCccCCCCCCEEeCCCCCCCCCCc
Q 001143 181 PEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLV-----ELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 181 ~~l~~l~~L~~L~Ls~N~L~-----~iP~~l~~l~~L~~L~Ls~N~L~-----~IP~~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
..+..+.+|+.|+|++|.|+ .++..+..+++|+.|+|++|.++ .++..+..+++|+.|+|++|.++....
T Consensus 159 ~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~ 238 (319)
T cd00116 159 KALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGA 238 (319)
T ss_pred HHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHH
Confidence 55677789999999999998 34556777789999999999997 345567778999999999999996433
Q ss_pred ccccC-----CCCCCEEEccCCcCCC--CCCCchhhhhcccCCCCCCCCCCccc
Q 001143 251 LDLCL-----MHNLQNLNLQYNKLLS--YCQVPSWICCNLEGNGKDSSNDDFIS 297 (1141)
Q Consensus 251 ~~l~~-----L~~L~~L~Ls~N~L~~--~~~iP~~~~~~l~~~~l~~~~n~l~~ 297 (1141)
..+.. .+.|+.|++++|.++. ...+...+........++.+.|.+..
T Consensus 239 ~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~ 292 (319)
T cd00116 239 AALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGE 292 (319)
T ss_pred HHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcH
Confidence 33332 3799999999999873 11233333334455666666666653
No 452
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.61 E-value=4e-16 Score=180.63 Aligned_cols=186 Identities=23% Similarity=0.292 Sum_probs=136.5
Q ss_pred ceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEE
Q 001143 896 LQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVK 975 (1141)
Q Consensus 896 ~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vK 975 (1141)
.++||.|++|.-.+|.+||.+. ......++...+.++.|++.|++| ++.+|+|+||.||++..+ ..+|
T Consensus 329 ~~lyI~Mn~c~~~tledWl~rr--~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d-------~q~k 396 (516)
T KOG1033|consen 329 VYLYIQMNLCEKETLEDWLRRR--RTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDD-------DQLK 396 (516)
T ss_pred cchhhhhhhhhhhhHHHHhhCC--CcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccc-------hhhh
Confidence 3579999999999999999752 223457888999999999999999 999999999999999877 6799
Q ss_pred EeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC-CCCCCCCCH
Q 001143 976 LCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL-QVPYMGLSE 1054 (1141)
Q Consensus 976 L~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG-k~Pf~~~~~ 1054 (1141)
|+|||+............ ........+||..||+||.+.+ ..|+.|+||||||++|+|++.- ..+|. .
T Consensus 397 IgDFgl~ts~~~~~~~~~----~~a~~t~~~gt~~YmsPEQi~g----~~y~~kvdIyaLGlil~EL~~~f~T~~e---r 465 (516)
T KOG1033|consen 397 IGDFGLVTSQDKDETVAP----AAASHTQQVGTLLYMSPEQIRG----QQYSEKVDIYALGLILAELLIQFSTQFE---R 465 (516)
T ss_pred hhhhhheeecccCCcccc----hhhhhhhcccccccCCHHHHhh----hhhhhhcchhhHHHHHHHHHHHhccHHH---H
Confidence 999999876554331100 0112234579999999999997 6799999999999999999972 22221 1
Q ss_pred HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1055 LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1055 ~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
......+..+..|+... ...+.-..|+.+|+.+.|.+||++.+..-|.|.
T Consensus 466 ~~t~~d~r~g~ip~~~~---------------------------~d~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~ 515 (516)
T KOG1033|consen 466 IATLTDIRDGIIPPEFL---------------------------QDYPEEYTLLQQLLSPSPEERPSAIEVALHEFL 515 (516)
T ss_pred HHhhhhhhcCCCChHHh---------------------------hcCcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence 11233344444332111 111234688999999999999988777666654
No 453
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.58 E-value=6.6e-17 Score=186.53 Aligned_cols=204 Identities=28% Similarity=0.404 Sum_probs=168.1
Q ss_pred cccccCCCCCccccCCCCCC-CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001143 19 KEKLPSEANKINNEKNGSVN-DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1141)
Q Consensus 19 l~~L~~~~N~i~~i~~~~f~-~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1141)
.+.+.+..-+++.-+-+.+. ++..-...||+.|++..+ |..+..| ..|+.|.|+.|.|..||..+.+|..|++||
T Consensus 52 sg~l~Ls~rrlk~fpr~a~~~~ltdt~~aDlsrNR~~el-p~~~~~f---~~Le~liLy~n~~r~ip~~i~~L~~lt~l~ 127 (722)
T KOG0532|consen 52 SGRLLLSGRRLKEFPRGAASYDLTDTVFADLSRNRFSEL-PEEACAF---VSLESLILYHNCIRTIPEAICNLEALTFLD 127 (722)
T ss_pred hcccccccchhhcCCCccccccccchhhhhccccccccC-chHHHHH---HHHHHHHHHhccceecchhhhhhhHHHHhh
Confidence 34455656666666655544 566777899999999865 4445555 789999999999999999999999999999
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCC
Q 001143 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1141)
Q Consensus 98 Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1141)
|+.|+|+.+|..++.|+ |+.|-+++|+++.+| ..++.+..|.+|+.+.|.|.
T Consensus 128 ls~NqlS~lp~~lC~lp-Lkvli~sNNkl~~lp---------------------------~~ig~~~tl~~ld~s~nei~ 179 (722)
T KOG0532|consen 128 LSSNQLSHLPDGLCDLP-LKVLIVSNNKLTSLP---------------------------EEIGLLPTLAHLDVSKNEIQ 179 (722)
T ss_pred hccchhhcCChhhhcCc-ceeEEEecCccccCC---------------------------cccccchhHHHhhhhhhhhh
Confidence 99999999999998764 777777766655544 45556677888999999999
Q ss_pred ccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCC
Q 001143 178 YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1141)
Q Consensus 178 ~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L 256 (1141)
.+|..++.+.+|+.|.+..|++..+|.+++.|+ |..||+|.|+++.||-.|.+|+.|++|-|.+|.|+..+. .++..
T Consensus 180 slpsql~~l~slr~l~vrRn~l~~lp~El~~Lp-Li~lDfScNkis~iPv~fr~m~~Lq~l~LenNPLqSPPA-qIC~k 256 (722)
T KOG0532|consen 180 SLPSQLGYLTSLRDLNVRRNHLEDLPEELCSLP-LIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPLQSPPA-QICEK 256 (722)
T ss_pred hchHHhhhHHHHHHHHHhhhhhhhCCHHHhCCc-eeeeecccCceeecchhhhhhhhheeeeeccCCCCCChH-HHHhc
Confidence 999999999999999999999999999998665 899999999999999999999999999999999997765 55443
No 454
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.58 E-value=8.5e-15 Score=156.35 Aligned_cols=143 Identities=17% Similarity=0.163 Sum_probs=105.5
Q ss_pred ceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChH--------------HHHHhHHhHHHHHHHHhhCCCCC--
Q 001143 808 LSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSAD--------------EIRNFEYSCLGEVRMLGALRHSC-- 870 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~--------------~~~~~~~~~~~Ei~iL~~L~HpN-- 870 (1141)
|.+.+.||+|+||.||+|.+ .+..+++|+........... ........+..|+.++.++.|++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 67789999999999999988 57889999866432111000 00011123478999999998774
Q ss_pred ccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcc
Q 001143 871 IVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIM 950 (1141)
Q Consensus 871 IVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIv 950 (1141)
++..++. . ..++||||++|++|...... .....++.+++.++.++|+.||+
T Consensus 97 v~~~~~~----~--------------~~~lv~e~~~g~~L~~~~~~-----------~~~~~~~~~i~~~l~~lh~~gi~ 147 (198)
T cd05144 97 VPKPIDW----N--------------RHAVVMEYIDGVELYRVRVL-----------EDPEEVLDEILEEIVKAYKHGII 147 (198)
T ss_pred CCceeec----C--------------CceEEEEEeCCcchhhcccc-----------ccHHHHHHHHHHHHHHHHHCCCC
Confidence 3443321 1 12899999999998765321 23567889999999999999999
Q ss_pred ccCCCCCCeeeecccccCCCCCeEEEeecccccccc
Q 001143 951 HRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLR 986 (1141)
Q Consensus 951 HrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~ 986 (1141)
||||||+||+++.+ +.++|+|||.+....
T Consensus 148 H~Dl~p~Nill~~~-------~~~~liDfg~~~~~~ 176 (198)
T cd05144 148 HGDLSEFNILVDDD-------EKIYIIDWPQMVSTD 176 (198)
T ss_pred cCCCCcccEEEcCC-------CcEEEEECCccccCC
Confidence 99999999999876 789999999986543
No 455
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=1.4e-13 Score=151.60 Aligned_cols=146 Identities=15% Similarity=0.185 Sum_probs=105.4
Q ss_pred eeeec-ccCceEEEEEEECCccEEEEEEecccC-----CCChHHHHHhHHhHHHHHHHHhhCCCCCc--cceeeeEecCC
Q 001143 811 CDEAG-KSVSSSLFRCKFGSADAAAKVRTLKVC-----GSSADEIRNFEYSCLGEVRMLGALRHSCI--VEMYGHKISSK 882 (1141)
Q Consensus 811 ~~~LG-~GsfG~Vy~a~~~~~~vAvKI~~l~~~-----~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI--Vkllg~~~~~~ 882 (1141)
...|| .|+.|+||.+...+..+++|.+..... ............++.+|++++.++.|++| ++.+++.....
T Consensus 36 ~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 36 ARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred CceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 45677 888899999988888899988742110 00000001112345899999999998775 67777644322
Q ss_pred CCCCCCCCCccccceEEEEEeeccC-CCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKG-GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~g-gSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. .....++||||++| .+|.+++.. ..++... +.||+.+|.+||++||+||||||.|||+
T Consensus 116 ~----------~~~~~~lV~e~l~G~~~L~~~l~~------~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv 175 (239)
T PRK01723 116 G----------LFYRADILIERIEGARDLVALLQE------APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILL 175 (239)
T ss_pred C----------cceeeeEEEEecCCCCCHHHHHhc------CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEE
Confidence 1 12234799999997 699988764 2355443 5789999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccc
Q 001143 962 DLERKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~ 983 (1141)
+.+ +.++|+|||.+.
T Consensus 176 ~~~-------~~v~LIDfg~~~ 190 (239)
T PRK01723 176 DPD-------GKFWLIDFDRGE 190 (239)
T ss_pred cCC-------CCEEEEECCCcc
Confidence 876 679999999874
No 456
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.51 E-value=1.6e-14 Score=170.49 Aligned_cols=193 Identities=35% Similarity=0.400 Sum_probs=99.9
Q ss_pred EEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCC-CCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCC
Q 001143 73 LYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLL-GLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRP 151 (1141)
Q Consensus 73 L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~-~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~ 151 (1141)
|+++.|.+..-+..+..++.++.|++.+|.++.||.....++ +|+.|+++.|.+..++..+..+++|+.|++++|++.
T Consensus 98 l~~~~~~~~~~~~~~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~N~l~- 176 (394)
T COG4886 98 LDLNLNRLRSNISELLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSFNDLS- 176 (394)
T ss_pred eeccccccccCchhhhcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCCchhh-
Confidence 444444443222333344444555555555554444444442 455555555554444444444555555555543332
Q ss_pred CcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccC
Q 001143 152 SVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYL 231 (1141)
Q Consensus 152 ~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~ 231 (1141)
.+|...+.++.|+.|++++|+++.+|..+..+..|..|.+++|.+..++..+..+.++..|.+++|++..+|..++.
T Consensus 177 ---~l~~~~~~~~~L~~L~ls~N~i~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~ 253 (394)
T COG4886 177 ---DLPKLLSNLSNLNNLDLSGNKISDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLPESIGN 253 (394)
T ss_pred ---hhhhhhhhhhhhhheeccCCccccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeeccchhcc
Confidence 22323334555555666666666555544444456666666665545555555555566666666666555555555
Q ss_pred CCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 001143 232 LQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 232 L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
+++|+.|++++|+++.+.+ +..+.+|+.|++++|.+..
T Consensus 254 l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 254 LSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred ccccceecccccccccccc--ccccCccCEEeccCccccc
Confidence 5556666666666665544 5555566666666665554
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=1.7e-15 Score=186.08 Aligned_cols=267 Identities=22% Similarity=0.227 Sum_probs=192.3
Q ss_pred CCCCceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~ 881 (1141)
+...|.+.+.||+|+|+.|-.+.. .....+++.+.+........... +...|..+-..+. |+|++.+++...+.
T Consensus 18 ~~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~----~i~~e~~~~~~~s~h~n~~~~~~~~~~~ 93 (601)
T KOG0590|consen 18 PNSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSE----HIDTETDIQKKLSKHSNTVHMIEPSSSP 93 (601)
T ss_pred ccccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhh----hcCccccccccccccccccccCCccCCC
Confidence 356688889999999999988775 34444555544444332222222 2356888888886 99999999987765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCCee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH-SKHIMHRDIKSENIL 960 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLH-s~gIvHrDLKP~NIL 960 (1141)
... +++++|..|+++.+-+.. ......+...+..++.|+..++.|+| ..++.|+||||+|.+
T Consensus 94 ~~~--------------~~~~~~s~g~~~f~~i~~---~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~ 156 (601)
T KOG0590|consen 94 RSY--------------LLSLSYSDGGSLFSKISH---PDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSL 156 (601)
T ss_pred ccc--------------ccccCccccccccccccc---CCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccch
Confidence 543 899999999999988831 12225677788899999999999999 999999999999999
Q ss_pred eecccccCCCCC-eEEEeeccccccccccccccccccCCCCCCCCccC-CCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 961 IDLERKKADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVG-TPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 961 ld~~~~~~~~~~-~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
++.. + ..++.|||+|..+...... ........| ++.|+|||...+. ....+..|+||.|++
T Consensus 157 l~~s-------~~~l~~~df~~At~~~~~~g~-------~~~~~~~~g~s~~y~a~E~~~~~---~~~~~~~d~~S~g~~ 219 (601)
T KOG0590|consen 157 LDES-------GSALKIADFGLATAYRNKNGA-------ERSLKDRCGSSPPYGAPEHLSGK---AYRGPSVDVWSLGIV 219 (601)
T ss_pred hccC-------CCcccCCCchhhccccccCCc-------ceeeecccCCCCCCCCcccccch---hhcCCCccccccccc
Confidence 9887 5 8999999999876552111 111223457 9999999998762 344689999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHH--HHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1039 LLELLTLQVPYMGLSELEIH--DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~--~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+.-+++|..||......+.. ..+..... .....-........+++.+++..+|
T Consensus 220 l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~l~k~l~~~~ 274 (601)
T KOG0590|consen 220 LSAMLTGELPWDFPSRKDGRYSSWKSNKGR-------------------------FTQLPWNSISDQAHDLLHKILKENP 274 (601)
T ss_pred ccccccCCCCccccccccccceeecccccc-------------------------cccCccccCChhhhhcccccccCCc
Confidence 99999999999754332210 00000000 0000001445567888999999999
Q ss_pred CCCCCHHHHHHHHHhhc
Q 001143 1117 TERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~ 1133 (1141)
..|.+.+++..+.|...
T Consensus 275 ~~r~s~~~~~~d~~~~~ 291 (601)
T KOG0590|consen 275 SNRLSIEELKLDNWLSS 291 (601)
T ss_pred hhccccccccccccccc
Confidence 99999999999998876
No 458
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.47 E-value=3.2e-13 Score=142.19 Aligned_cols=142 Identities=15% Similarity=0.191 Sum_probs=94.9
Q ss_pred eeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHH----------------HHhHHhHHHHHHHHhhCCCCC--c
Q 001143 811 CDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEI----------------RNFEYSCLGEVRMLGALRHSC--I 871 (1141)
Q Consensus 811 ~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~----------------~~~~~~~~~Ei~iL~~L~HpN--I 871 (1141)
.+.||+|+||+||+|.+. +..+++|+.+........... .........|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999986 788999986543221111000 000011135666666664332 3
Q ss_pred cceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHH-HHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCc
Q 001143 872 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKN-YIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHI 949 (1141)
Q Consensus 872 Vkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~-~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gI 949 (1141)
.+.++.. ..++||||++++++.. .+... ... ..+..++.+++.++.++|. .||
T Consensus 82 ~~~~~~~------------------~~~lv~e~~~g~~~~~~~l~~~------~~~-~~~~~~~~~~~~~l~~lh~~~~i 136 (187)
T cd05119 82 PKPIDLN------------------RHVLVMEFIGGDGIPAPRLKDV------RLL-EDPEELYDQILELMRKLYREAGL 136 (187)
T ss_pred CceEecC------------------CCEEEEEEeCCCCccChhhhhh------hhc-ccHHHHHHHHHHHHHHHhhccCc
Confidence 3333321 2389999999854321 12210 011 6678899999999999999 999
Q ss_pred cccCCCCCCeeeecccccCCCCCeEEEeeccccccc
Q 001143 950 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPL 985 (1141)
Q Consensus 950 vHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l 985 (1141)
+||||||+||+++ + +.++|+|||.+...
T Consensus 137 vH~Dl~p~Nili~-~-------~~~~liDfg~a~~~ 164 (187)
T cd05119 137 VHGDLSEYNILVD-D-------GKVYIIDVPQAVEI 164 (187)
T ss_pred CcCCCChhhEEEE-C-------CcEEEEECcccccc
Confidence 9999999999998 5 78999999998644
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.46 E-value=8.6e-14 Score=164.31 Aligned_cols=200 Identities=30% Similarity=0.339 Sum_probs=176.6
Q ss_pred EEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCc-CCcEEEccCCCCCcCchhhcCCCCCCEEEccC
Q 001143 45 VIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYE-KLRNLKFFGNEINLFPSEVGNLLGLECLQIKI 123 (1141)
Q Consensus 45 ~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~-~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~ 123 (1141)
.|+++.|.+...+.. +..++.++.|++.+|.++.||.....+. +|+.|++++|+|..+|..++++++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~~----~~~~~~l~~L~l~~n~i~~i~~~~~~~~~nL~~L~l~~N~i~~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNISE----LLELTNLTSLDLDNNNITDIPPLIGLLKSNLKELDLSDNKIESLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCchh----hhcccceeEEecCCcccccCccccccchhhcccccccccchhhhhhhhhccccccccccCC
Confidence 688888888555443 2334789999999999999999888885 99999999999999998999999999999999
Q ss_pred CCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCcccccc
Q 001143 124 SSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLP 203 (1141)
Q Consensus 124 N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP 203 (1141)
|++..++.....+++|+.|++++|.+ ..+|.....+..|+.|.+++|.+..++..+.++.++..|.+.+|++..+|
T Consensus 173 N~l~~l~~~~~~~~~L~~L~ls~N~i----~~l~~~~~~~~~L~~l~~~~N~~~~~~~~~~~~~~l~~l~l~~n~~~~~~ 248 (394)
T COG4886 173 NDLSDLPKLLSNLSNLNNLDLSGNKI----SDLPPEIELLSALEELDLSNNSIIELLSSLSNLKNLSGLELSNNKLEDLP 248 (394)
T ss_pred chhhhhhhhhhhhhhhhheeccCCcc----ccCchhhhhhhhhhhhhhcCCcceecchhhhhcccccccccCCceeeecc
Confidence 99999998777999999999999655 45565555666799999999987777888899999999999999999989
Q ss_pred ccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccc
Q 001143 204 TEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDL 253 (1141)
Q Consensus 204 ~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l 253 (1141)
..++.+++|+.|++++|.++.++. ++.+.+|+.|++++|.++..++...
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i~~-~~~~~~l~~L~~s~n~~~~~~~~~~ 297 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSISS-LGSLTNLRELDLSGNSLSNALPLIA 297 (394)
T ss_pred chhccccccceecccccccccccc-ccccCccCEEeccCccccccchhhh
Confidence 999999999999999999999987 9999999999999999999988543
No 460
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.41 E-value=9.8e-13 Score=131.26 Aligned_cols=132 Identities=20% Similarity=0.230 Sum_probs=104.2
Q ss_pred EeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC--CCccceeeeEecCCCCCCC
Q 001143 810 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--SCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 810 i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H--pNIVkllg~~~~~~~~~~~ 887 (1141)
+.+.||+|.++.||++...+..+++|+..... . ... +.+|+.++..++| +++++++++....+
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~--~----~~~----~~~e~~~~~~l~~~~~~~p~~~~~~~~~~----- 66 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKDEDYVLKINPSRE--K----GAD----REREVAILQLLARKGLPVPKVLASGESDG----- 66 (155)
T ss_pred cceecccccccceEEEEecCCeEEEEecCCCC--c----hhH----HHHHHHHHHHHHHcCCCCCeEEEEcCCCC-----
Confidence 45789999999999999988888888753221 1 122 3789999999975 58888887765432
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCCCCeeeecc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---HIMHRDIKSENILIDLE 964 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~---gIvHrDLKP~NILld~~ 964 (1141)
..+++|||++|+.+..+ +......++.+++.++.++|.. +++|||++|.||+++..
T Consensus 67 ---------~~~~v~e~~~g~~~~~~------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~ 125 (155)
T cd05120 67 ---------WSYLLMEWIEGETLDEV------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDG 125 (155)
T ss_pred ---------ccEEEEEecCCeecccC------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECC
Confidence 34999999998766533 4456677889999999999984 79999999999999875
Q ss_pred cccCCCCCeEEEeecccccc
Q 001143 965 RKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~ 984 (1141)
+.++++|||.+..
T Consensus 126 -------~~~~l~Df~~~~~ 138 (155)
T cd05120 126 -------KILGIIDWEYAGY 138 (155)
T ss_pred -------cEEEEEecccccC
Confidence 7899999998753
No 461
>PLN03150 hypothetical protein; Provisional
Probab=99.30 E-value=7.2e-12 Score=156.03 Aligned_cols=91 Identities=29% Similarity=0.430 Sum_probs=68.1
Q ss_pred CCEEEccCCccc-cccccccCCCCCCEEEccCCCCC-cCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccC
Q 001143 189 LEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQY 266 (1141)
Q Consensus 189 L~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~ 266 (1141)
++.|+|++|.|+ .+|..++.+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|+|.+|..+..|++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 567777777777 67777777777777777777776 6777777777777777777777777777777777777777777
Q ss_pred CcCCCCCCCchhhhh
Q 001143 267 NKLLSYCQVPSWICC 281 (1141)
Q Consensus 267 N~L~~~~~iP~~~~~ 281 (1141)
|+|++ .+|..+..
T Consensus 500 N~l~g--~iP~~l~~ 512 (623)
T PLN03150 500 NSLSG--RVPAALGG 512 (623)
T ss_pred Ccccc--cCChHHhh
Confidence 77776 57766553
No 462
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.21 E-value=1.2e-10 Score=123.97 Aligned_cols=143 Identities=14% Similarity=0.105 Sum_probs=102.9
Q ss_pred eeeecccCceEEEEEEEC--------CccEEEEEEecccCCCCh------------------HHHHHhHHhHHHHHHHHh
Q 001143 811 CDEAGKSVSSSLFRCKFG--------SADAAAKVRTLKVCGSSA------------------DEIRNFEYSCLGEVRMLG 864 (1141)
Q Consensus 811 ~~~LG~GsfG~Vy~a~~~--------~~~vAvKI~~l~~~~~~~------------------~~~~~~~~~~~~Ei~iL~ 864 (1141)
...||.|--+.||.|... +..+|+|+++........ ...+.+..+..+|++.|.
T Consensus 2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~ 81 (197)
T cd05146 2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK 81 (197)
T ss_pred CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence 357899999999999754 368999997754321111 112223334569999999
Q ss_pred hCC--CCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHH-HHHHhhhcCCCCCCHHHHHHHHHHHHHHH
Q 001143 865 ALR--HSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKN-YIEKLSETGEKHVSVKLALFIAQDVAAAL 941 (1141)
Q Consensus 865 ~L~--HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~-~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL 941 (1141)
++. .-++.+++++.. -+|||||+.+..+.. .+++ ..++..+...+..|++.+|
T Consensus 82 rl~~~Gv~vP~pi~~~~------------------~~lvME~Ig~~~~~~~~Lkd------~~~~~~~~~~i~~~i~~~l 137 (197)
T cd05146 82 RMQKAGIPCPEVVVLKK------------------HVLVMSFIGDDQVPAPKLKD------AKLNDEEMKNAYYQVLSMM 137 (197)
T ss_pred HHHHcCCCCCeEEEecC------------------CEEEEEEcCCCCccchhhhc------cccCHHHHHHHHHHHHHHH
Confidence 995 456777776521 289999997654422 2222 2355667778889999999
Q ss_pred HHH-HHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccc
Q 001143 942 VEL-HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPL 985 (1141)
Q Consensus 942 ~yL-Hs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l 985 (1141)
..| |..|||||||++.||+++. +.++|+|||.+...
T Consensus 138 ~~l~H~~glVHGDLs~~NIL~~~--------~~v~iIDF~qav~~ 174 (197)
T cd05146 138 KQLYKECNLVHADLSEYNMLWHD--------GKVWFIDVSQSVEP 174 (197)
T ss_pred HHHHHhCCeecCCCCHHHEEEEC--------CcEEEEECCCceeC
Confidence 999 8999999999999999974 56999999988654
No 463
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.19 E-value=1.5e-12 Score=155.06 Aligned_cols=220 Identities=27% Similarity=0.245 Sum_probs=125.2
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCC
Q 001143 38 NDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLE 117 (1141)
Q Consensus 38 ~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~ 117 (1141)
..+..+..++|..|.|.... ..++.+++|..|+|.+|+|..+...+..+++|++|+|++|+|+.+. .+..|+.|+
T Consensus 69 ~~l~~l~~l~l~~n~i~~~~----~~l~~~~~l~~l~l~~n~i~~i~~~l~~~~~L~~L~ls~N~I~~i~-~l~~l~~L~ 143 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIAKIL----NHLSKLKSLEALDLYDNKIEKIENLLSSLVNLQVLDLSFNKITKLE-GLSTLTLLK 143 (414)
T ss_pred HHhHhHHhhccchhhhhhhh----cccccccceeeeeccccchhhcccchhhhhcchheecccccccccc-chhhccchh
Confidence 34455556666666665411 1133446777777777777766544666777777777777777663 255566677
Q ss_pred EEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCC
Q 001143 118 CLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFN 197 (1141)
Q Consensus 118 ~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N 197 (1141)
.|++++|.+..+.. +..+.+|+.|++++|.+...... . ...+..|+.+++.+|.+..+ ..+..+..+..+++..|
T Consensus 144 ~L~l~~N~i~~~~~-~~~l~~L~~l~l~~n~i~~ie~~--~-~~~~~~l~~l~l~~n~i~~i-~~~~~~~~l~~~~l~~n 218 (414)
T KOG0531|consen 144 ELNLSGNLISDISG-LESLKSLKLLDLSYNRIVDIEND--E-LSELISLEELDLGGNSIREI-EGLDLLKKLVLLSLLDN 218 (414)
T ss_pred hheeccCcchhccC-CccchhhhcccCCcchhhhhhhh--h-hhhccchHHHhccCCchhcc-cchHHHHHHHHhhcccc
Confidence 77777777665543 33366666666666554322221 0 34455666666666666644 22333444444566666
Q ss_pred ccccccccccCCCC--CCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCC
Q 001143 198 KMKYLPTEICYLKA--LISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLL 270 (1141)
Q Consensus 198 ~L~~iP~~l~~l~~--L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~ 270 (1141)
.++.+ ..+..+.. |+.+++++|.+..+|..+..+.++..|++++|+++..- .+...+.+..+.+..|++.
T Consensus 219 ~i~~~-~~l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (414)
T KOG0531|consen 219 KISKL-EGLNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRISNLE--GLERLPKLSELWLNDNKLA 290 (414)
T ss_pred cceec-cCcccchhHHHHHHhcccCccccccccccccccccccchhhccccccc--cccccchHHHhccCcchhc
Confidence 66644 22222333 66666666666666555556666666666666666553 2444555555666666554
No 464
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.18 E-value=2.4e-11 Score=133.34 Aligned_cols=214 Identities=21% Similarity=0.236 Sum_probs=144.3
Q ss_pred HHHhhCCCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH
Q 001143 861 RMLGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAA 940 (1141)
Q Consensus 861 ~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~g 940 (1141)
.-+.++-|.|||+++.|+.+.++ ...+...+++||+..|++..++++..... ..+......+|.-||+.|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~---------~e~~rviFiteymssgs~~~fLkrt~~~~-~a~~~~~wkkw~tqIlsa 188 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKY---------EEKPRVIFITEYMSSGSLKQFLKRTKKNQ-KALFQKAWKKWCTQILSA 188 (458)
T ss_pred HHHHHHHHHHHHHHHHhhccccc---------ccccceEEEEecccchhHHHHHHHHHHhh-hhhhHHHHHHHHHHHHhh
Confidence 34556679999999999987543 13456789999999999999999876554 578899999999999999
Q ss_pred HHHHHHC--CccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhc
Q 001143 941 LVELHSK--HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR 1018 (1141)
Q Consensus 941 L~yLHs~--gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 1018 (1141)
|.|||+. .|+|+++..+-|++..+ +-+|++--... ........... .......+-++|.|||.=.
T Consensus 189 l~yLhs~~PpiihgnlTc~tifiq~n-------gLIkig~~ap~-s~h~s~~~~~~-----~Ek~~~~~~~g~~a~~sg~ 255 (458)
T KOG1266|consen 189 LSYLHSCDPPIIHGNLTCDTIFIQHN-------GLIKIGSVAPD-STHPSVNSTRE-----AEKSVNTSLPGFSAPESGT 255 (458)
T ss_pred hhhhhccCCccccCCcchhheeecCC-------ceEEecccCcc-ccchhhhhhhH-----hhhhccccCCccccCCcCc
Confidence 9999976 69999999999999876 55665421111 11110011000 0111224677899999743
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHhCCCC-CCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhh
Q 001143 1019 AMHKPNLYGLEVDIWSYGCLLLELLTLQVP-YMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1097 (1141)
Q Consensus 1019 ~~~~~~~~s~ksDVWSLGviL~ELLTGk~P-f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1141)
. ...+.++|||+||....||..+..- -.+.+..+....+......
T Consensus 256 ~----tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~------------------------------ 301 (458)
T KOG1266|consen 256 T----TNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG------------------------------ 301 (458)
T ss_pred c----cccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee------------------------------
Confidence 2 3456789999999999999887532 2222222222222111100
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1098 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1098 ~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
-....-++++.+|++..|..||+|.+++-|+...
T Consensus 302 -len~lqr~~i~kcl~~eP~~rp~ar~llfHpllf 335 (458)
T KOG1266|consen 302 -LENGLQRGSITKCLEGEPNGRPDARLLLFHPLLF 335 (458)
T ss_pred -ccCccccCcCcccccCCCCCCcchhhhhcCceee
Confidence 0001134568999999999999999999987543
No 465
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.18 E-value=3.3e-12 Score=152.02 Aligned_cols=238 Identities=23% Similarity=0.205 Sum_probs=185.7
Q ss_pred ccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEcc
Q 001143 20 EKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFF 99 (1141)
Q Consensus 20 ~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls 99 (1141)
..+.+..|.|..+ .+.+..+.+|..|+|.+|+|..+... +..+.+|++|+|++|+|+.| ..+..++.|+.|+++
T Consensus 75 ~~l~l~~n~i~~~-~~~l~~~~~l~~l~l~~n~i~~i~~~----l~~~~~L~~L~ls~N~I~~i-~~l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 75 KELNLRQNLIAKI-LNHLSKLKSLEALDLYDNKIEKIENL----LSSLVNLQVLDLSFNKITKL-EGLSTLTLLKELNLS 148 (414)
T ss_pred Hhhccchhhhhhh-hcccccccceeeeeccccchhhcccc----hhhhhcchheeccccccccc-cchhhccchhhheec
Confidence 3344555666652 45578889999999999999876531 34559999999999999998 457788889999999
Q ss_pred CCCCCcCchhhcCCCCCCEEEccCCCCCCCccc-ccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc
Q 001143 100 GNEINLFPSEVGNLLGLECLQIKISSPGVNGFA-LNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1141)
Q Consensus 100 ~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~-~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1141)
+|.|+.++. +..++.|+.+++++|.+..+... ...+.+|+.|++.+|.+.... .+..+..+..+++..|.++.
T Consensus 149 ~N~i~~~~~-~~~l~~L~~l~l~~n~i~~ie~~~~~~~~~l~~l~l~~n~i~~i~-----~~~~~~~l~~~~l~~n~i~~ 222 (414)
T KOG0531|consen 149 GNLISDISG-LESLKSLKLLDLSYNRIVDIENDELSELISLEELDLGGNSIREIE-----GLDLLKKLVLLSLLDNKISK 222 (414)
T ss_pred cCcchhccC-CccchhhhcccCCcchhhhhhhhhhhhccchHHHhccCCchhccc-----chHHHHHHHHhhccccccee
Confidence 999998854 66699999999999998877765 588999999999997764332 33445556666999999997
Q ss_pred cCccccCCCC--CCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCC---Cccc-
Q 001143 179 LPPEIGCLSN--LEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSL---GSLD- 252 (1141)
Q Consensus 179 iP~~l~~l~~--L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~---~p~~- 252 (1141)
+ ..+..+.. |+.|++++|.+..++..+..+..+..|++++|++..+. .+.....+..+.++.|.+... ....
T Consensus 223 ~-~~l~~~~~~~L~~l~l~~n~i~~~~~~~~~~~~l~~l~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (414)
T KOG0531|consen 223 L-EGLNELVMLHLRELYLSGNRISRSPEGLENLKNLPVLDLSSNRISNLE-GLERLPKLSELWLNDNKLALSEAISQEYI 300 (414)
T ss_pred c-cCcccchhHHHHHHhcccCccccccccccccccccccchhhccccccc-cccccchHHHhccCcchhcchhhhhcccc
Confidence 6 22334444 89999999999998888899999999999999998663 344566778888888887732 2222
Q ss_pred ccCCCCCCEEEccCCcCCC
Q 001143 253 LCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~ 271 (1141)
....+.+..+.+.+|++..
T Consensus 301 ~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 301 TSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred ccccccccccccccCcccc
Confidence 5677899999999999877
No 466
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.17 E-value=1.4e-11 Score=128.60 Aligned_cols=130 Identities=20% Similarity=0.167 Sum_probs=43.6
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhc-CCCC
Q 001143 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVG-NLLG 115 (1141)
Q Consensus 37 f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~-~L~~ 115 (1141)
+.+...++.|+|++|+|+.+- .++. .+.+|+.|+|++|.|+.|+ .+..++.|+.|+|++|.|+.+++.+. .+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~Ie--~L~~--~l~~L~~L~Ls~N~I~~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTIE--NLGA--TLDKLEVLDLSNNQITKLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--T--T-TT--EEE-TTS--S--T-T----TT--EEE--SS---S-CHHHHHH-TT
T ss_pred ccccccccccccccccccccc--chhh--hhcCCCEEECCCCCCcccc-CccChhhhhhcccCCCCCCccccchHHhCCc
Confidence 445556777888888777531 2221 3467788888888887774 46777778888888888887765553 5777
Q ss_pred CCEEEccCCCCCCCcc--cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEc
Q 001143 116 LECLQIKISSPGVNGF--ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1141)
Q Consensus 116 L~~L~Ls~N~l~~~~~--~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~L 171 (1141)
|+.|+|++|++..+.. .+..+++|+.|+|.+|++.....--...+..+|+|+.||-
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~ 147 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDG 147 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETT
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCC
Confidence 8888887777665543 3555666666666666554333222334455666666654
No 467
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.13 E-value=7.7e-11 Score=139.67 Aligned_cols=257 Identities=22% Similarity=0.193 Sum_probs=176.4
Q ss_pred ceEeeeecc--cCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEec
Q 001143 808 LSSCDEAGK--SVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKIS 880 (1141)
Q Consensus 808 y~i~~~LG~--GsfG~Vy~a~~----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~ 880 (1141)
+.+.+.+|. |.+|.||.+.. ....+|+|.-+.... ........ .+|+....+++ |+|.++.+..+..
T Consensus 116 ~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s-~p~~~~~k-----~~~~~s~~~i~~~~~~v~~~~~~e~ 189 (524)
T KOG0601|consen 116 FPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFS-PPLDSKRK-----LREFLSHHKIDSHENPVRDSPAWEG 189 (524)
T ss_pred cccccccccCCCCCceeecccCCcccCCcccccccccCCCC-Cccccccc-----cchhhcccccCccccccccCccccc
Confidence 467788999 99999999876 344455554222211 11111222 47777777885 9999998888777
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHH----HHHHHHHCCccccCCCC
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAA----ALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~----gL~yLHs~gIvHrDLKP 956 (1141)
.+.. ++-+|++. .+|.++.+. ....++...++.++.+... ||.++|+.+++|-|+||
T Consensus 190 ~~~l--------------fiqtE~~~-~sl~~~~~~----~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp 250 (524)
T KOG0601|consen 190 SGIL--------------FIQTELCG-ESLQSYCHT----PCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKP 250 (524)
T ss_pred CCcc--------------eeeecccc-chhHHhhhc----ccccCCchhhhhHHhhhhhcccccccccCCCcccccccch
Confidence 6644 88899985 788877764 2334788888888999888 99999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
.||+...+. ..++++|||....+....-..... ......|...|++||...+ .++...|+|++|
T Consensus 251 ~~i~~~~~~------~s~~~~df~~v~~i~~~~~~~~~~-----~~~r~~~~~~Y~~ke~~~~-----l~~~~~di~sl~ 314 (524)
T KOG0601|consen 251 ANIFTTSDW------TSCKLTDFGLVSKISDGNFSSVFK-----VSKRPEGDCIYAAKELLNG-----LATFASDIFSLG 314 (524)
T ss_pred hheeccccc------ceeecCCcceeEEccCCcccccee-----eeecCCCCceEeChhhhcc-----ccchHhhhcchh
Confidence 999997762 578999999988776543211100 0011146778999999875 678999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1037 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
.++.+..++..++...-. .....+..+. + ..+.-...+.++...+..|++.+|
T Consensus 315 ev~l~~~l~~~~~~~g~~-~~W~~~r~~~---i-----------------------p~e~~~~~s~~l~~~~~~~~d~~~ 367 (524)
T KOG0601|consen 315 EVILEAILGSHLPSVGKN-SSWSQLRQGY---I-----------------------PLEFCEGGSSSLRSVTSQMLDEDP 367 (524)
T ss_pred hhhHhhHhhcccccCCCC-CCcccccccc---C-----------------------chhhhcCcchhhhhHHHHhcCcch
Confidence 999999988766542100 0011111110 0 111111333446668999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001143 1117 TERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~ 1132 (1141)
..|++++.+.++.+..
T Consensus 368 ~~~~~~q~~~~l~~i~ 383 (524)
T KOG0601|consen 368 RLRLTAQILTALNVIH 383 (524)
T ss_pred hhhhHHHHHhcccccc
Confidence 9999999998876543
No 468
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.12 E-value=1.5e-11 Score=151.71 Aligned_cols=272 Identities=22% Similarity=0.248 Sum_probs=181.6
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
.+++.+.+.+-+-.|+++.++.++-.+. ..+.++......... .+.+.. ..+-.++...+||-++...--+..
T Consensus 801 sS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~-~~~~s~----r~~s~~~i~p~~P~v~~~~~s~~~ 875 (1205)
T KOG0606|consen 801 SSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRT-NDYESI----RSKSNILITPRSPAVVRSFPSFPC 875 (1205)
T ss_pred CCCccceecccccCCCCcccccCCccccccccchhhhccchhhcc-cccccc----CCccCccccCCCCceecccCCCCC
Confidence 4677889999999999999998765322 223333211110000 111111 233333333445666654433222
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..+|||+|+.+++|...++.. ...+..-++.....+..+++|||+..+.|+|++|.|++
T Consensus 876 rs--------------P~~L~~~~~~~~~~~Skl~~~-----~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l 936 (1205)
T KOG0606|consen 876 RS--------------PLPLVGHYLNGGDLPSKLHNS-----GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLL 936 (1205)
T ss_pred CC--------------CcchhhHHhccCCchhhhhcC-----CCcccccccchhHHHHhhhhccccchhhcccccccchh
Confidence 11 348999999999999999862 24666667777888899999999999999999999999
Q ss_pred eecccccCCCCCeEEEeecccccccccccccc--------------c-------cccCCCCCCCCccCCCcccchhhhcc
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTC--------------C-------IAHRGIPAPDVCVGTPRWMAPEVLRA 1019 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~--------------~-------~~~~~~~~~~~~~GT~~Y~APE~l~~ 1019 (1141)
+..+ +..++.|||............ . .............||+.|.+||...+
T Consensus 937 ~~~~-------gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg 1009 (1205)
T KOG0606|consen 937 IAYD-------GHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLG 1009 (1205)
T ss_pred hccc-------CCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCccccc
Confidence 9887 789999998443221110000 0 00000011234579999999999987
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhh
Q 001143 1020 MHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE 1099 (1141)
Q Consensus 1020 ~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1141)
......+|+|++|++++|.++|.+||......++++.|..+..+.. +-...
T Consensus 1010 ----~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p-------------------------~g~~~ 1060 (1205)
T KOG0606|consen 1010 ----RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWP-------------------------EGPEE 1060 (1205)
T ss_pred ----ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCC-------------------------CCccc
Confidence 4456889999999999999999999998888877776654443221 11124
Q ss_pred hHHHHHHHHHHhcccCCCCCCCHH---HHHHHHHhhcC
Q 001143 1100 TLSFLVDVFRRCTEENPTERPTAG---DLYEMFVARTS 1134 (1141)
Q Consensus 1100 ~~~~L~dLI~~cL~~DP~~RPSa~---ElL~~L~~~~~ 1134 (1141)
.+....+++...+..+|.+|..+. ++-.|.+|...
T Consensus 1061 ~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~ 1098 (1205)
T KOG0606|consen 1061 GSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDV 1098 (1205)
T ss_pred cChhhhhhhhhhhccCchhccCcccccccccCCccCCC
Confidence 556688999999999999998776 77777776543
No 469
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.12 E-value=1.4e-11 Score=133.09 Aligned_cols=201 Identities=24% Similarity=0.202 Sum_probs=137.0
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCC-CCCCc---ccccCCCCCCEEE
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISS-PGVNG---FALNKLKGLKELE 143 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~-l~~~~---~~~~~L~~L~~L~ 143 (1141)
.+|..+.+|...-..|-.-...-|-|+.|.+.+..++..|.-+ -.+.+. |...-. -+..+ ..+..+..|++|+
T Consensus 214 ~~l~~~~~s~~~~~~i~~~~~~kptl~t~~v~~s~~~~~~~l~-pe~~~~--D~~~~E~~t~~G~~~~~~dTWq~LtelD 290 (490)
T KOG1259|consen 214 RNLKTLKFSALSTENIVDIELLKPTLQTICVHNTTIQDVPSLL-PETILA--DPSGSEPSTSNGSALVSADTWQELTELD 290 (490)
T ss_pred hhhheeeeeccchhheeceeecCchhheeeeeccccccccccc-chhhhc--CccCCCCCccCCceEEecchHhhhhhcc
Confidence 5566666665544444222223345777777666655332211 111111 222222 11111 2345566789999
Q ss_pred CCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCC
Q 001143 144 LSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLV 223 (1141)
Q Consensus 144 Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~ 223 (1141)
|++|.+. .+-.++.-++.++.|++++|.|..+-. +..|++|+.||||+|.|+.+..+=..+.+++.|.|++|.|.
T Consensus 291 LS~N~I~----~iDESvKL~Pkir~L~lS~N~i~~v~n-La~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL~La~N~iE 365 (490)
T KOG1259|consen 291 LSGNLIT----QIDESVKLAPKLRRLILSQNRIRTVQN-LAELPQLQLLDLSGNLLAECVGWHLKLGNIKTLKLAQNKIE 365 (490)
T ss_pred ccccchh----hhhhhhhhccceeEEeccccceeeehh-hhhcccceEeecccchhHhhhhhHhhhcCEeeeehhhhhHh
Confidence 9996654 334455667889999999999998744 88899999999999999988766667788999999999998
Q ss_pred cCCcCccCCCCCCEEeCCCCCCCCCCcc-cccCCCCCCEEEccCCcCCCCCCCchhhh
Q 001143 224 ELPSGLYLLQRLENLDLSNNRLTSLGSL-DLCLMHNLQNLNLQYNKLLSYCQVPSWIC 280 (1141)
Q Consensus 224 ~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~-~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1141)
.+. ++..|-+|..||+++|+|...... .+++||.|+.|.|.+|||.+ +|+.-.
T Consensus 366 ~LS-GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~---~vdYRT 419 (490)
T KOG1259|consen 366 TLS-GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG---SVDYRT 419 (490)
T ss_pred hhh-hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccc---cchHHH
Confidence 874 688888999999999999866432 48899999999999999988 554433
No 470
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=1.6e-11 Score=139.20 Aligned_cols=203 Identities=19% Similarity=0.143 Sum_probs=111.6
Q ss_pred CCCccEEEeecCCCCccCc--cccCCcCCcEEEccCCCCCcCc---hhhcCCCCCCEEEccCCCCCCCc--ccccCCCCC
Q 001143 67 DNSVEGLYLYKNVLNLIPK--SVGRYEKLRNLKFFGNEINLFP---SEVGNLLGLECLQIKISSPGVNG--FALNKLKGL 139 (1141)
Q Consensus 67 L~~L~~L~Ls~N~Lt~iP~--~l~~L~~L~~L~Ls~N~L~~lP---~~~~~L~~L~~L~Ls~N~l~~~~--~~~~~L~~L 139 (1141)
+.+|+...|.+....-.+. ....+++++.||||.|-|..+- .-...|++|+.|+|+.|++...- ..-..+..|
T Consensus 120 ~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~l~~l 199 (505)
T KOG3207|consen 120 LKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLLLSHL 199 (505)
T ss_pred HHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhhhhhh
Confidence 3455555555554443331 3445555555555555554331 11334555555555555533221 112245556
Q ss_pred CEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC-CCccCccccCCCCCCEEEccCCcccccc--ccccCCCCCCEEE
Q 001143 140 KELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS-IRYLPPEIGCLSNLEQLDLSFNKMKYLP--TEICYLKALISLK 216 (1141)
Q Consensus 140 ~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~-L~~iP~~l~~l~~L~~L~Ls~N~L~~iP--~~l~~l~~L~~L~ 216 (1141)
+.|.|+...++. ..+-..+..+|+|++|+|..|. +..--.....+..|+.|+|++|++-..+ ..++.++.|..|+
T Consensus 200 K~L~l~~CGls~--k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~~Ln 277 (505)
T KOG3207|consen 200 KQLVLNSCGLSW--KDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLNQLN 277 (505)
T ss_pred heEEeccCCCCH--HHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchhhhh
Confidence 666666654432 1222334456777777777774 2211112244567777777777777665 4567777777777
Q ss_pred ccCCCCCcC--CcC-----ccCCCCCCEEeCCCCCCCCCCc-ccccCCCCCCEEEccCCcCCC
Q 001143 217 VANNKLVEL--PSG-----LYLLQRLENLDLSNNRLTSLGS-LDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 217 Ls~N~L~~I--P~~-----l~~L~~L~~L~Ls~N~Lt~~~p-~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
++.+.+.+| |+. ...+++|++|+++.|++..... ..+..+++|+.|.+..|+|+.
T Consensus 278 ls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 278 LSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNK 340 (505)
T ss_pred ccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccc
Confidence 777777644 543 3346777777777777754332 134455666777777777765
No 471
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.11 E-value=1.6e-10 Score=138.05 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=96.1
Q ss_pred eeecccCceEEEEEEE-CCccEEEEEEecccCCCC--------------------------hHHHHHhHH------hHHH
Q 001143 812 DEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSS--------------------------ADEIRNFEY------SCLG 858 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~--------------------------~~~~~~~~~------~~~~ 858 (1141)
+.||.|++|.||+|+. .+..||||+.+-.....- ....+++.. .+.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 5799999999999997 578899999643211000 011112222 2345
Q ss_pred HHHHHhhCC----CCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHH
Q 001143 859 EVRMLGALR----HSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIA 934 (1141)
Q Consensus 859 Ei~iL~~L~----HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia 934 (1141)
|+..+.+++ |.+-+.+-..+.+. ....+|||||++|++|.++.... .. .. ....++
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~-------------~~~~vLvmE~i~G~~L~~~~~~~-~~---~~---~~~~ia 262 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDR-------------TSERVLTMEWIDGIPLSDIAALD-EA---GL---DRKALA 262 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhh-------------cCCceEEEEeECCcccccHHHHH-hc---CC---CHHHHH
Confidence 565555552 22222222222211 11238999999999998876531 11 12 234566
Q ss_pred HHHHH-HHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccc
Q 001143 935 QDVAA-ALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRS 987 (1141)
Q Consensus 935 ~QIa~-gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~ 987 (1141)
.+++. .+..+|..|++|+|+||.||+++.+ +.++++|||++..+..
T Consensus 263 ~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~-------g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 263 ENLARSFLNQVLRDGFFHADLHPGNIFVLKD-------GKIIALDFGIVGRLSE 309 (437)
T ss_pred HHHHHHHHHHHHhCCceeCCCCcccEEECCC-------CcEEEEeCCCeeECCH
Confidence 66666 4788999999999999999999877 7899999999976643
No 472
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.09 E-value=1.4e-10 Score=140.61 Aligned_cols=166 Identities=14% Similarity=0.184 Sum_probs=98.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCC--------------------------CChHHHHHhHHhH
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCG--------------------------SSADEIRNFEYSC 856 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~--------------------------~~~~~~~~~~~~~ 856 (1141)
+..|+. +.||.|++|.||+|+.. ++.||||+.+-.... ......+++...+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 445666 78999999999999974 788999997532100 0111233444455
Q ss_pred HHHHHHHhhCCCCCccceeeeEecCCCC--CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcC--CCCCCHHHHHH
Q 001143 857 LGEVRMLGALRHSCIVEMYGHKISSKWL--PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG--EKHVSVKLALF 932 (1141)
Q Consensus 857 ~~Ei~iL~~L~HpNIVkllg~~~~~~~~--~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~--~~~Ls~~~i~~ 932 (1141)
.+|+.+.... +|+.++...|.+...+ |.. ........+|||||++|+.+.++-.- ...+ ...+....+..
T Consensus 198 ~~ElD~~~Ea--~N~~~~~~~f~~~~~v~VP~v---~~d~st~~VLvmE~i~G~~l~d~~~l-~~~g~d~~~la~~~v~~ 271 (537)
T PRK04750 198 HDELDLMREA--ANASQLRRNFEDSDMLYVPEV---YWDYCSETVMVMERMYGIPVSDVAAL-RAAGTDMKLLAERGVEV 271 (537)
T ss_pred HHhhCHHHHH--HHHHHHHHHccCCCCeeccee---ecccCCCceEEEeeecCccHHhHHHH-HhcCCCHHHHHHHHHHH
Confidence 5555554444 3444444433322211 000 00011234799999999999875321 1111 11233333444
Q ss_pred HHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccc
Q 001143 933 IAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRS 987 (1141)
Q Consensus 933 Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~ 987 (1141)
++.|| +..|++|+|+||.||+++.++. ..+.++++|||++..+..
T Consensus 272 ~~~Qi-------f~~GffHaDpHPGNIlv~~~g~---~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 272 FFTQV-------FRDGFFHADMHPGNIFVSYDPP---ENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHH-------HhCCeeeCCCChHHeEEecCCC---CCCeEEEEecceEEECCH
Confidence 44444 4689999999999999987621 123899999999977654
No 473
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.08 E-value=4.5e-10 Score=116.05 Aligned_cols=127 Identities=16% Similarity=0.199 Sum_probs=91.9
Q ss_pred eeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCc-cceeeeEecCCCCCCCCC
Q 001143 811 CDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI-VEMYGHKISSKWLPSADG 889 (1141)
Q Consensus 811 ~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI-Vkllg~~~~~~~~~~~~g 889 (1141)
.+.|+.|.++.||+++..+..+++|+..... ..... +.+|+.++..+.+.++ .+++.+...
T Consensus 3 ~~~l~~G~~~~vy~~~~~~~~~~lK~~~~~~-----~~~~~----~~~E~~~l~~l~~~~~~P~~~~~~~~--------- 64 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVANKKYVVRIPGNGT-----ELLIN----RENEAENSKLAAEAGIGPKLYYFDPE--------- 64 (170)
T ss_pred eeecCCcccCceEEEEECCeEEEEEeCCCCc-----ccccC----HHHHHHHHHHHHHhCCCCceEEEeCC---------
Confidence 4678999999999999988889998753221 01112 2578999988865444 445544321
Q ss_pred CCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-----cccCCCCCCeeeecc
Q 001143 890 NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHI-----MHRDIKSENILIDLE 964 (1141)
Q Consensus 890 ~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gI-----vHrDLKP~NILld~~ 964 (1141)
..++||||++|.++... . .....++.+++.+|..||+.++ +|||++|.||+++ +
T Consensus 65 -------~~~lv~e~i~G~~l~~~--~-----------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~ 123 (170)
T cd05151 65 -------TGVLITEFIEGSELLTE--D-----------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-D 123 (170)
T ss_pred -------CCeEEEEecCCCccccc--c-----------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-C
Confidence 12799999998877542 0 0113456789999999999885 9999999999998 3
Q ss_pred cccCCCCCeEEEeeccccc
Q 001143 965 RKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~ 983 (1141)
+.++++|||.+.
T Consensus 124 -------~~~~liDf~~a~ 135 (170)
T cd05151 124 -------GRLWLIDWEYAG 135 (170)
T ss_pred -------CeEEEEeccccc
Confidence 569999999874
No 474
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.08 E-value=1.6e-09 Score=111.39 Aligned_cols=153 Identities=22% Similarity=0.241 Sum_probs=109.9
Q ss_pred EeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCC
Q 001143 810 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADG 889 (1141)
Q Consensus 810 i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g 889 (1141)
....+-+|+-+.|+++.+.++...+|-...+.-..+.-+.+--..+..+|++++.++.--.|.-..=++.+..
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~------- 83 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY------- 83 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-------
Confidence 5678889999999999999999888875544433333333444567789999999986444433333333321
Q ss_pred CCccccceEEEEEeeccC-CCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 890 NPEHHLLQSAIFMEYVKG-GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 890 ~~~~~~~~~~LVmEy~~g-gSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
.-.|+|||++| .++.+++...... .........++.+|-..+.-||.++||||||..+||++..++
T Consensus 84 -------~~~i~ME~~~g~~~vk~~i~~~~~~---~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~--- 150 (229)
T KOG3087|consen 84 -------GGQIYMEFIDGASTVKDFILSTMED---ESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDG--- 150 (229)
T ss_pred -------CCeEEEEeccchhHHHHHHHHHccC---cccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCC---
Confidence 12899999986 4888888763222 222233367888888999999999999999999999997763
Q ss_pred CCCCeEEEeeccccc
Q 001143 969 DGKPVVKLCDFDRAV 983 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~ 983 (1141)
....+.++|||++.
T Consensus 151 -~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 151 -NQITPILIDFGLSS 164 (229)
T ss_pred -CcCceEEEeecchh
Confidence 23667999999874
No 475
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.07 E-value=7.6e-11 Score=123.14 Aligned_cols=108 Identities=22% Similarity=0.200 Sum_probs=29.3
Q ss_pred CCCCccEEEeecCCCCccCcccc-CCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccc-cCCCCCCEEE
Q 001143 66 GDNSVEGLYLYKNVLNLIPKSVG-RYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFAL-NKLKGLKELE 143 (1141)
Q Consensus 66 ~L~~L~~L~Ls~N~Lt~iP~~l~-~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~-~~L~~L~~L~ 143 (1141)
+..++++|+|++|.|+.|. .++ .+.+|+.|+|++|.|+.|+ .+..|++|++|++++|.++.++..+ ..+++|++|+
T Consensus 17 n~~~~~~L~L~~n~I~~Ie-~L~~~l~~L~~L~Ls~N~I~~l~-~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTIE-NLGATLDKLEVLDLSNNQITKLE-GLPGLPRLKTLDLSNNRISSISEGLDKNLPNLQELY 94 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S--T-T----TT--EEE--SS---S-CHHHHHH-TT--EEE
T ss_pred ccccccccccccccccccc-chhhhhcCCCEEECCCCCCcccc-CccChhhhhhcccCCCCCCccccchHHhCCcCCEEE
Confidence 3356788888888887773 455 5677888888888888775 4667777777777777766665333 2455555555
Q ss_pred CCCCCCCCCcccchhhhcCCCCCcEEEccCCCCC
Q 001143 144 LSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1141)
Q Consensus 144 Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1141)
|++|.+.....- ..+..+++|+.|+|.+|.++
T Consensus 95 L~~N~I~~l~~l--~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 95 LSNNKISDLNEL--EPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TTS---SCCCC--GGGGG-TT--EEE-TT-GGG
T ss_pred CcCCcCCChHHh--HHHHcCCCcceeeccCCccc
Confidence 555544332211 22334444444444444444
No 476
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.07 E-value=1.6e-09 Score=112.04 Aligned_cols=138 Identities=20% Similarity=0.240 Sum_probs=98.3
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNP 891 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~ 891 (1141)
..+++|+-+.||.+.|.+..+.+|...-+.-..+.-+.+--..+..+|+.++.+++--.|...+=+..+..
T Consensus 2 ~~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~--------- 72 (204)
T COG3642 2 DLIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPD--------- 72 (204)
T ss_pred chhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCC---------
Confidence 46789999999999998878888875433222222222222346689999999986444333322333222
Q ss_pred ccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCC
Q 001143 892 EHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGK 971 (1141)
Q Consensus 892 ~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~ 971 (1141)
...|+|||++|..|.+.+... . ..++..|-.-+.-||..|||||||.++||++...
T Consensus 73 -----~~~I~me~I~G~~lkd~l~~~--------~----~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~------- 128 (204)
T COG3642 73 -----NGLIVMEYIEGELLKDALEEA--------R----PDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG------- 128 (204)
T ss_pred -----CCEEEEEEeCChhHHHHHHhc--------c----hHHHHHHHHHHHHHHhcCeecCCCccceEEEeCC-------
Confidence 237999999998888888761 1 3455666667788999999999999999999764
Q ss_pred CeEEEeeccccc
Q 001143 972 PVVKLCDFDRAV 983 (1141)
Q Consensus 972 ~~vKL~DFGlA~ 983 (1141)
.+.++|||++.
T Consensus 129 -~i~~IDfGLg~ 139 (204)
T COG3642 129 -RIYFIDFGLGE 139 (204)
T ss_pred -cEEEEECCccc
Confidence 59999999985
No 477
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=1.8e-10 Score=136.64 Aligned_cols=255 Identities=22% Similarity=0.156 Sum_probs=175.3
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCC-hHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSS-ADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 879 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~-~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~ 879 (1141)
....+|..+..||.|.|+.|+....+ .....++++.+...... ..++.. ..|+.+...+. |.+++.++..+.
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~s-----l~ev~l~~~l~~~~~~~g~~~~W~ 336 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFS-----LGEVILEAILGSHLPSVGKNSSWS 336 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcc-----hhhhhHhhHhhcccccCCCCCCcc
Confidence 34567889999999999999998754 34444444433332222 222223 47888887774 999998877766
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.... .|+--|||+++++...+.- ...+++...+++..|++.++.++|+..++|+|+||+||
T Consensus 337 ~~r~--------------~~ip~e~~~~~s~~l~~~~-----~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni 397 (524)
T KOG0601|consen 337 QLRQ--------------GYIPLEFCEGGSSSLRSVT-----SQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNI 397 (524)
T ss_pred cccc--------------ccCchhhhcCcchhhhhHH-----HHhcCcchhhhhHHHHHhccccccchhhhcccccccce
Confidence 5432 3788899999987766532 23578888999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCccc-chhhhccccCCCCCCchhhHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWM-APEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~-APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
++..++ +..+++|||.++.+..... ...+.-.+. ..|++.. ...+..+.|++|||..
T Consensus 398 ~i~~~~------~~~~~~~~~~~t~~~~~~~-------------~~~~~~r~~p~~~~~~e---~~~~~~~~~~~sl~~~ 455 (524)
T KOG0601|consen 398 LISNDG------FFSKLGDFGCWTRLAFSSG-------------VFHHIDRLYPIAEILLE---DYPHLSKADIFSLGLS 455 (524)
T ss_pred eeccch------hhhhccccccccccceecc-------------cccccccccccchhhcc---cccccccccccccccc
Confidence 997752 5688999999865332111 111233344 3455443 2566789999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+.+.+++...-... .....|..+..+..+ ....++..+...+...++..
T Consensus 456 ~~e~~~~~~ls~~~---~~~~~i~~~~~p~~~----------------------------~~~~~~q~~~kv~~~~~~~~ 504 (524)
T KOG0601|consen 456 VDEAITGSPLSESG---VQSLTIRSGDTPNLP----------------------------GLKLQLQVLLKVMINPDRKR 504 (524)
T ss_pred ccccccCcccCccc---ccceeeecccccCCC----------------------------chHHhhhhhhhhhcCCcccc
Confidence 99999885422111 112223333333222 22255778889999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
||.+.++..|..+...
T Consensus 505 ~~l~~~l~~~~~~~~~ 520 (524)
T KOG0601|consen 505 RPSAVELSLHSEFYRD 520 (524)
T ss_pred chhhhhhcccchhhhh
Confidence 9999999888776543
No 478
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.04 E-value=4.6e-11 Score=129.25 Aligned_cols=132 Identities=23% Similarity=0.179 Sum_probs=105.3
Q ss_pred CCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEE
Q 001143 113 LLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQL 192 (1141)
Q Consensus 113 L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L 192 (1141)
+..|+.||||+|.++.+..+..-++.++.|++++|++... ..++.|++|+.|||++|.++.+-.+-..|-+++.|
T Consensus 283 Wq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v-----~nLa~L~~L~~LDLS~N~Ls~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 283 WQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTV-----QNLAELPQLQLLDLSGNLLAECVGWHLKLGNIKTL 357 (490)
T ss_pred HhhhhhccccccchhhhhhhhhhccceeEEeccccceeee-----hhhhhcccceEeecccchhHhhhhhHhhhcCEeee
Confidence 3556666777777666666666667777777777554211 23677889999999999999886655778899999
Q ss_pred EccCCccccccccccCCCCCCEEEccCCCCCcC--CcCccCCCCCCEEeCCCCCCCCCCc
Q 001143 193 DLSFNKMKYLPTEICYLKALISLKVANNKLVEL--PSGLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 193 ~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~I--P~~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
.|+.|.|.++ ..++.+-+|..||+++|+|..+ -..+++|+-|+.|.|-+|.|.+++.
T Consensus 358 ~La~N~iE~L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vd 416 (490)
T KOG1259|consen 358 KLAQNKIETL-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVD 416 (490)
T ss_pred ehhhhhHhhh-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccch
Confidence 9999999988 5788899999999999999865 4689999999999999999998875
No 479
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.02 E-value=3.2e-11 Score=136.80 Aligned_cols=207 Identities=20% Similarity=0.172 Sum_probs=150.9
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC---ccccCCcCCcEEEccCCCCCcCchh--hcC
Q 001143 38 NDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP---KSVGRYEKLRNLKFFGNEINLFPSE--VGN 112 (1141)
Q Consensus 38 ~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP---~~l~~L~~L~~L~Ls~N~L~~lP~~--~~~ 112 (1141)
+++.+|+.+.|.+..+.-...+ +....|++++.||||.|.|...- .-...|++|+.|+|+.|.+...-++ -..
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~--~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~~~ 195 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIE--EYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTTLL 195 (505)
T ss_pred hhHHhhhheeecCccccccchh--hhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccchhh
Confidence 4667888888888877644332 33455688999999999887542 2356888999999999998743222 235
Q ss_pred CCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccC--ccccCCCC
Q 001143 113 LLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLP--PEIGCLSN 188 (1141)
Q Consensus 113 L~~L~~L~Ls~N~l~~--~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP--~~l~~l~~ 188 (1141)
+++|+.|.|+.+.++. +.-....+++|+.|+|..|.. -..... ....+..|+.|+|++|++-..+ ...+.++.
T Consensus 196 l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~-~~~~~~--~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~ 272 (505)
T KOG3207|consen 196 LSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEI-ILIKAT--STKILQTLQELDLSNNNLIDFDQGYKVGTLPG 272 (505)
T ss_pred hhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccc-cceecc--hhhhhhHHhhccccCCcccccccccccccccc
Confidence 7888899998888663 223567788999999998751 122222 2334667999999999988776 45689999
Q ss_pred CCEEEccCCccccc--ccc-----ccCCCCCCEEEccCCCCCcCC--cCccCCCCCCEEeCCCCCCCCCC
Q 001143 189 LEQLDLSFNKMKYL--PTE-----ICYLKALISLKVANNKLVELP--SGLYLLQRLENLDLSNNRLTSLG 249 (1141)
Q Consensus 189 L~~L~Ls~N~L~~i--P~~-----l~~l~~L~~L~Ls~N~L~~IP--~~l~~L~~L~~L~Ls~N~Lt~~~ 249 (1141)
|+.|+++.+.|++| |+. ...+++|++|+++.|++...+ ..+..+++|+.|....|.|+..-
T Consensus 273 L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ln~e~ 342 (505)
T KOG3207|consen 273 LNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNYLNKET 342 (505)
T ss_pred hhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccchhhhhhcccccccccc
Confidence 99999999999954 554 455789999999999997665 34555788888898899988543
No 480
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.98 E-value=2.7e-11 Score=134.43 Aligned_cols=233 Identities=19% Similarity=0.171 Sum_probs=153.5
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccC-CCCCCCccEEEeecCCCC----ccCcc-------ccCCcCCcEEEccCCCCC-
Q 001143 38 NDDDDDSVIDVSGKTVDFPLIESYGN-RGGDNSVEGLYLYKNVLN----LIPKS-------VGRYEKLRNLKFFGNEIN- 104 (1141)
Q Consensus 38 ~~l~~L~~LdLs~N~Ls~~~p~~~~~-l~~L~~L~~L~Ls~N~Lt----~iP~~-------l~~L~~L~~L~Ls~N~L~- 104 (1141)
.....++.|+||+|.+...-..+++. +...++|+.-++++=... ++|+. +...+.|++||||.|.|.
T Consensus 27 ~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~ 106 (382)
T KOG1909|consen 27 EPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGP 106 (382)
T ss_pred cccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCc
Confidence 34557788888888875433322221 233367777777654222 45543 345567888888888886
Q ss_pred cCch----hhcCCCCCCEEEccCCCCCCCccc--------------ccCCCCCCEEECCCCCCCCCccc-chhhhcCCCC
Q 001143 105 LFPS----EVGNLLGLECLQIKISSPGVNGFA--------------LNKLKGLKELELSKVPPRPSVLT-LLSEIAGLKC 165 (1141)
Q Consensus 105 ~lP~----~~~~L~~L~~L~Ls~N~l~~~~~~--------------~~~L~~L~~L~Ls~N~ln~~~~~-lp~~l~~L~~ 165 (1141)
.-+. -+..++.|+.|+|.+|.++..... ...-+.|+.+....|++-+-... +-..|...+.
T Consensus 107 ~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~ 186 (382)
T KOG1909|consen 107 KGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPT 186 (382)
T ss_pred cchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccc
Confidence 2222 256678888888887776654421 23345688888888776544332 3345666788
Q ss_pred CcEEEccCCCCCc--c---CccccCCCCCCEEEccCCccc-----cccccccCCCCCCEEEccCCCCC-----cCCcCcc
Q 001143 166 LTKLSVCHFSIRY--L---PPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLV-----ELPSGLY 230 (1141)
Q Consensus 166 L~~L~Ls~N~L~~--i---P~~l~~l~~L~~L~Ls~N~L~-----~iP~~l~~l~~L~~L~Ls~N~L~-----~IP~~l~ 230 (1141)
|+.+.+..|.|.. + -..+..+++|+.|||.+|-|+ .+-..+..|++|+.|+++.+.|+ .+-..+.
T Consensus 187 leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~ 266 (382)
T KOG1909|consen 187 LEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALK 266 (382)
T ss_pred cceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHh
Confidence 8888888888762 2 234677888888888888887 34566778888888888888886 2223333
Q ss_pred C-CCCCCEEeCCCCCCCCCC----cccccCCCCCCEEEccCCcCC
Q 001143 231 L-LQRLENLDLSNNRLTSLG----SLDLCLMHNLQNLNLQYNKLL 270 (1141)
Q Consensus 231 ~-L~~L~~L~Ls~N~Lt~~~----p~~l~~L~~L~~L~Ls~N~L~ 270 (1141)
. .++|+.|.|.+|.++.-- ...+...+.|..|+|++|.|.
T Consensus 267 ~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 267 ESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred ccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 2 678889999998887332 223556788888999999883
No 481
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.95 E-value=5e-11 Score=132.27 Aligned_cols=229 Identities=18% Similarity=0.175 Sum_probs=175.6
Q ss_pred CcccccCCCCCccccC----CCCCCCCCCCCEEEccCC---CCCCCCccccc----CCCCCCCccEEEeecCCCC-c-cC
Q 001143 18 IKEKLPSEANKINNEK----NGSVNDDDDDSVIDVSGK---TVDFPLIESYG----NRGGDNSVEGLYLYKNVLN-L-IP 84 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~----~~~f~~l~~L~~LdLs~N---~Ls~~~p~~~~----~l~~L~~L~~L~Ls~N~Lt-~-iP 84 (1141)
.+.+|.+.+|.+..-. ...+.+.++|+..++|+= ++...+|+.+. .+.+.++|++|+||.|-|. . ++
T Consensus 31 s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA~G~~g~~ 110 (382)
T KOG1909|consen 31 SLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNAFGPKGIR 110 (382)
T ss_pred ceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccccCccchH
Confidence 6788889988875433 345677789999999974 33444454332 2345569999999999997 3 33
Q ss_pred c---cccCCcCCcEEEccCCCCCcCch--------------hhcCCCCCCEEEccCCCCCCCcc-----cccCCCCCCEE
Q 001143 85 K---SVGRYEKLRNLKFFGNEINLFPS--------------EVGNLLGLECLQIKISSPGVNGF-----ALNKLKGLKEL 142 (1141)
Q Consensus 85 ~---~l~~L~~L~~L~Ls~N~L~~lP~--------------~~~~L~~L~~L~Ls~N~l~~~~~-----~~~~L~~L~~L 142 (1141)
. -|.+..+|+.|+|.||-|...-. -.+.-++|+++..+.|++..-|. .|...+.|+.+
T Consensus 111 ~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leev 190 (382)
T KOG1909|consen 111 GLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEV 190 (382)
T ss_pred HHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHhccccceE
Confidence 2 36778899999999999873321 23567899999999999887773 57788999999
Q ss_pred ECCCCCCCCCcc-cchhhhcCCCCCcEEEccCCCCCc-----cCccccCCCCCCEEEccCCccc-----ccccccc-CCC
Q 001143 143 ELSKVPPRPSVL-TLLSEIAGLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMK-----YLPTEIC-YLK 210 (1141)
Q Consensus 143 ~Ls~N~ln~~~~-~lp~~l~~L~~L~~L~Ls~N~L~~-----iP~~l~~l~~L~~L~Ls~N~L~-----~iP~~l~-~l~ 210 (1141)
.++.|.+...-. .+-..|..+++|+.|+|..|-++. +...+..+++|+.|++++..++ .+-..+. ..+
T Consensus 191 r~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p 270 (382)
T KOG1909|consen 191 RLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAP 270 (382)
T ss_pred EEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHHHHhccCC
Confidence 999998865444 345678999999999999999983 3456788899999999999998 2333333 368
Q ss_pred CCCEEEccCCCCC-----cCCcCccCCCCCCEEeCCCCCCC
Q 001143 211 ALISLKVANNKLV-----ELPSGLYLLQRLENLDLSNNRLT 246 (1141)
Q Consensus 211 ~L~~L~Ls~N~L~-----~IP~~l~~L~~L~~L~Ls~N~Lt 246 (1141)
+|+.|.|++|.++ .+-..+...+.|..|+|++|+|.
T Consensus 271 ~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 271 SLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred CCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 9999999999997 33456677899999999999993
No 482
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.79 E-value=3.8e-08 Score=117.99 Aligned_cols=142 Identities=18% Similarity=0.255 Sum_probs=109.0
Q ss_pred HHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHH
Q 001143 857 LGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQD 936 (1141)
Q Consensus 857 ~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~Q 936 (1141)
.+-+.-|+.++||||+++++.++.++. .|||+|-+. .|..++.. +....+...+.|
T Consensus 57 ~~A~k~lKtlRHP~Il~yL~t~e~~~~--------------~ylvTErV~--Pl~~~lk~--------l~~~~v~~Gl~q 112 (690)
T KOG1243|consen 57 KRAVKRLKTLRHPNILSYLDTTEEEGT--------------LYLVTERVR--PLETVLKE--------LGKEEVCLGLFQ 112 (690)
T ss_pred HHHHHHhhhccCchhhhhhhhhcccCc--------------eEEEeeccc--cHHHHHHH--------hHHHHHHHHHHH
Confidence 567888999999999999999887664 499999984 78888876 446777788999
Q ss_pred HHHHHHHHH-HCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchh
Q 001143 937 VAAALVELH-SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPE 1015 (1141)
Q Consensus 937 Ia~gL~yLH-s~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 1015 (1141)
|+.||.||| ..+++|++|.-+-|+|+.. |..||++|..+........ ......--..|..|+
T Consensus 113 Il~AL~FL~~d~~lvHgNv~~~SVfVn~~-------GeWkLggle~v~~~~~~~~----------~~~~~~~~~s~~~P~ 175 (690)
T KOG1243|consen 113 ILAALSFLNDDCNLVHGNVCKDSVFVNES-------GEWKLGGLELVSKASGFNA----------PAKSLYLIESFDDPE 175 (690)
T ss_pred HHHHHHHHhccCCeeeccEeeeeEEEcCC-------CcEEEeeeEEEeccccCCc----------ccccchhhhcccChh
Confidence 999999998 5689999999999999998 8899999998754332110 001111223356666
Q ss_pred hhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 1016 VLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 1016 ~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
.+.. -+...|.|-|||+++|++.|
T Consensus 176 ~~~~------s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 176 EIDP------SEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred hcCc------cccchhhhhHHHHHHHHhCc
Confidence 5432 11457999999999999998
No 483
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.79 E-value=2.6e-08 Score=105.64 Aligned_cols=131 Identities=21% Similarity=0.243 Sum_probs=83.7
Q ss_pred EEEEEEE-CCccEEEEEEecccCCCCh------------------HHHHHhHHhHHHHHHHHhhCCCC--CccceeeeEe
Q 001143 821 SLFRCKF-GSADAAAKVRTLKVCGSSA------------------DEIRNFEYSCLGEVRMLGALRHS--CIVEMYGHKI 879 (1141)
Q Consensus 821 ~Vy~a~~-~~~~vAvKI~~l~~~~~~~------------------~~~~~~~~~~~~Ei~iL~~L~Hp--NIVkllg~~~ 879 (1141)
.||.|.. .+..+|+|+++........ ........+..+|++.|.++..- ++.+++++..
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~~ 80 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYNR 80 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEET
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEeC
Confidence 3899987 5778999998764332221 11222234668999999999754 5677775532
Q ss_pred cCCCCCCCCCCCccccceEEEEEeecc--CCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH-HHHCCccccCCCC
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVK--GGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVE-LHSKHIMHRDIKS 956 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~--ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~y-LHs~gIvHrDLKP 956 (1141)
-+|||||++ |..+..+... .++......++.+++..+.. +|..||+||||.+
T Consensus 81 ------------------~~ivME~I~~~G~~~~~l~~~-------~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~ 135 (188)
T PF01163_consen 81 ------------------NVIVMEYIGEDGVPLPRLKDV-------DLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSE 135 (188)
T ss_dssp ------------------TEEEEE--EETTEEGGCHHHC-------GGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-ST
T ss_pred ------------------CEEEEEecCCCccchhhHHhc-------cccchhHHHHHHHHHHHHHHHHHhcCceecCCCh
Confidence 189999998 6555544332 12244566778888886555 5799999999999
Q ss_pred CCeeeecccccCCCCCeEEEeecccccc
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
.||+++.+ .+.++|||.+..
T Consensus 136 ~NIlv~~~--------~~~iIDf~qav~ 155 (188)
T PF01163_consen 136 YNILVDDG--------KVYIIDFGQAVD 155 (188)
T ss_dssp TSEEEETT--------CEEE--GTTEEE
T ss_pred hhEEeecc--------eEEEEecCccee
Confidence 99999864 699999998864
No 484
>PLN03150 hypothetical protein; Provisional
Probab=98.78 E-value=8.3e-09 Score=128.85 Aligned_cols=106 Identities=24% Similarity=0.346 Sum_probs=97.7
Q ss_pred CcEEEccCCCCC-ccCccccCCCCCCEEEccCCccc-cccccccCCCCCCEEEccCCCCC-cCCcCccCCCCCCEEeCCC
Q 001143 166 LTKLSVCHFSIR-YLPPEIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSN 242 (1141)
Q Consensus 166 L~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~ 242 (1141)
++.|+|++|.|+ .+|..++.+++|+.|+|++|+|+ .+|..++.+++|+.|+|++|+|+ .+|..+++|++|+.|+|++
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~ 499 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNG 499 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcC
Confidence 778999999999 78999999999999999999998 89999999999999999999998 8899999999999999999
Q ss_pred CCCCCCCcccccCC-CCCCEEEccCCcCCC
Q 001143 243 NRLTSLGSLDLCLM-HNLQNLNLQYNKLLS 271 (1141)
Q Consensus 243 N~Lt~~~p~~l~~L-~~L~~L~Ls~N~L~~ 271 (1141)
|+|+|.+|..+..+ .++..+++.+|+..|
T Consensus 500 N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc 529 (623)
T PLN03150 500 NSLSGRVPAALGGRLLHRASFNFTDNAGLC 529 (623)
T ss_pred CcccccCChHHhhccccCceEEecCCcccc
Confidence 99999999888764 467889999998655
No 485
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.76 E-value=5e-09 Score=133.87 Aligned_cols=200 Identities=22% Similarity=0.244 Sum_probs=135.7
Q ss_pred cccccCCCCCccccCCCCCCCCCCCCEEEccCCC--CCCCCcccccCCCCCCCccEEEeecC-CCCccCccccCCcCCcE
Q 001143 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKT--VDFPLIESYGNRGGDNSVEGLYLYKN-VLNLIPKSVGRYEKLRN 95 (1141)
Q Consensus 19 l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~--Ls~~~p~~~~~l~~L~~L~~L~Ls~N-~Lt~iP~~l~~L~~L~~ 95 (1141)
...+.+..|++..+.... ..++|++|-+..|. +.....++|..+ +.|.+|||++| .++++|..+++|-+|++
T Consensus 525 ~rr~s~~~~~~~~~~~~~--~~~~L~tLll~~n~~~l~~is~~ff~~m---~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 525 VRRMSLMNNKIEHIAGSS--ENPKLRTLLLQRNSDWLLEISGEFFRSL---PLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred eeEEEEeccchhhccCCC--CCCccceEEEeecchhhhhcCHHHHhhC---cceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 445556666666554322 33379999999986 555555555444 89999999977 56789999999999999
Q ss_pred EEccCCCCCcCchhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCC
Q 001143 96 LKFFGNEINLFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1141)
Q Consensus 96 L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1141)
|+|+...|+.+|..+++|+.|.+|++..+. +..++.....|.+|++|.+..-.. ......-..+.+|.+|+.|.....
T Consensus 600 L~L~~t~I~~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~-~~~~~~l~el~~Le~L~~ls~~~~ 678 (889)
T KOG4658|consen 600 LDLSDTGISHLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSAL-SNDKLLLKELENLEHLENLSITIS 678 (889)
T ss_pred ccccCCCccccchHHHHHHhhheeccccccccccccchhhhcccccEEEeecccc-ccchhhHHhhhcccchhhheeecc
Confidence 999999999999999999999999998877 555667777799999999876431 222333445566777776666544
Q ss_pred CCCccCccccCCCCCC----EEEccCCccccccccccCCCCCCEEEccCCCCCcC
Q 001143 175 SIRYLPPEIGCLSNLE----QLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL 225 (1141)
Q Consensus 175 ~L~~iP~~l~~l~~L~----~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~I 225 (1141)
.. .+-..+..+++|. .+.+......+.+..+..+.+|+.|.+.+..+.++
T Consensus 679 s~-~~~e~l~~~~~L~~~~~~l~~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~e~ 732 (889)
T KOG4658|consen 679 SV-LLLEDLLGMTRLRSLLQSLSIEGCSKRTLISSLGSLGNLEELSILDCGISEI 732 (889)
T ss_pred hh-HhHhhhhhhHHHHHHhHhhhhcccccceeecccccccCcceEEEEcCCCchh
Confidence 43 2212222333332 33333444445666777777888888877777643
No 486
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.70 E-value=6.5e-08 Score=104.06 Aligned_cols=143 Identities=19% Similarity=0.189 Sum_probs=97.3
Q ss_pred eeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC--CCccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--SCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H--pNIVkllg~~~~~~~~~~~~ 888 (1141)
+.|+.|.++.||++...+ ..+++|+....... .... .+.+|+++++.+.+ .++.+++.+.....
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~---~~~~----~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~------ 70 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL---PSAH----DVAREYRVLRALAGTGVPVPKVLALCEDPS------ 70 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccC---cccc----cHHHHHHHHHHhhCCCCCCCCEEEECCCCC------
Confidence 678999999999998865 77888874322110 0112 23789999999965 44667776654321
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---------------------- 946 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs---------------------- 946 (1141)
.....++||||++|.++.+.+.. ..++......++.+++++|.+||+
T Consensus 71 -----~~~~~~~v~e~i~G~~l~~~~~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~ 139 (223)
T cd05154 71 -----VLGTPFYVMERVDGRVLRDRLLR------PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQV 139 (223)
T ss_pred -----ccCCceEEEEEeCCEecCCCCCC------CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHH
Confidence 00123899999998877665421 135666666677777777777763
Q ss_pred ----------------------------------CCccccCCCCCCeeeecccccCCCCCeEEEeeccccc
Q 001143 947 ----------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 947 ----------------------------------~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~ 983 (1141)
..++|+|++|.||+++.+. ...+.|+||+.+.
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~-----~~~~~iID~e~~~ 205 (223)
T cd05154 140 ARWRRQYDASRTDEPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDE-----PRVVAVLDWELAT 205 (223)
T ss_pred HHHHHHHHhhcccccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCC-----CcEEEEEeccccc
Confidence 2469999999999998720 0568999999874
No 487
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.69 E-value=3.5e-07 Score=102.47 Aligned_cols=150 Identities=16% Similarity=0.141 Sum_probs=97.5
Q ss_pred ceEEEEEEECCccEEEEEEecccCCCChHHHHHh------HHhHHHHHHHHhhCCCCC--ccceeeeEecCCCCCCCCCC
Q 001143 819 SSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNF------EYSCLGEVRMLGALRHSC--IVEMYGHKISSKWLPSADGN 890 (1141)
Q Consensus 819 fG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~------~~~~~~Ei~iL~~L~HpN--IVkllg~~~~~~~~~~~~g~ 890 (1141)
...|++..+.+..+.+|....... ....+.+ ...+.+|...+.++..-+ .+++++++.....
T Consensus 35 ~rrvvr~~~~g~~~~vKr~~~~~~---~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~------- 104 (268)
T PRK15123 35 GRRTLRFELAGKSYFLKWHRGTGW---GEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSN------- 104 (268)
T ss_pred CceEEEEEECCEEEEEEEecCCcH---HHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCC-------
Confidence 334667778888888886532110 0001110 002468988888885333 3444555543210
Q ss_pred CccccceEEEEEeeccCC-CHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCC
Q 001143 891 PEHHLLQSAIFMEYVKGG-SVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 969 (1141)
Q Consensus 891 ~~~~~~~~~LVmEy~~gg-SL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~ 969 (1141)
......+||||++++. +|.+++.... ....+......++.+++..+.-||..||+|||++++|||++.+.....
T Consensus 105 --~~~~~s~LVte~l~~~~sL~~~~~~~~---~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~ 179 (268)
T PRK15123 105 --PATRTSFIITEDLAPTISLEDYCADWA---TNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGRE 179 (268)
T ss_pred --CccceeEEEEeeCCCCccHHHHHHhhc---ccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCC
Confidence 0122458999999975 8999986421 234566778899999999999999999999999999999975200011
Q ss_pred CCCeEEEeeccccc
Q 001143 970 GKPVVKLCDFDRAV 983 (1141)
Q Consensus 970 ~~~~vKL~DFGlA~ 983 (1141)
+...+.|+||+.+.
T Consensus 180 ~~~~~~LIDl~r~~ 193 (268)
T PRK15123 180 EDLKLSVIDLHRAQ 193 (268)
T ss_pred CCceEEEEECCccc
Confidence 23689999999874
No 488
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.61 E-value=1.6e-08 Score=129.28 Aligned_cols=249 Identities=22% Similarity=0.202 Sum_probs=152.4
Q ss_pred CcccccCCCCC--ccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001143 18 IKEKLPSEANK--INNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1141)
Q Consensus 18 ~l~~L~~~~N~--i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1141)
.+.+|-+..|. +..+....|..++.|++||||+|.=-+.+|+.++.+ -+|++|+|+...++.+|..|.+|.+|.+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~L---i~LryL~L~~t~I~~LP~~l~~Lk~L~~ 622 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGEL---VHLRYLDLSDTGISHLPSGLGNLKKLIY 622 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhh---hhhhcccccCCCccccchHHHHHHhhhe
Confidence 57777777776 888888889999999999999987777888877666 8999999999999999999999999999
Q ss_pred EEccCCCCC-cCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc----EEE
Q 001143 96 LKFFGNEIN-LFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT----KLS 170 (1141)
Q Consensus 96 L~Ls~N~L~-~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~----~L~ 170 (1141)
||+..+.-. .+|..+..|++|++|.|...........+..+.+|+.|..-....... .+...+..+..|. .+.
T Consensus 623 Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~ 700 (889)
T KOG4658|consen 623 LNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLS 700 (889)
T ss_pred eccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhh
Confidence 999988754 556667779999999997655333333344444444444433222221 1111222222222 333
Q ss_pred ccCCCCCccCccccCCCCCCEEEccCCccccccc-cccC------CCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCC
Q 001143 171 VCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPT-EICY------LKALISLKVANNKLVELPSGLYLLQRLENLDLSNN 243 (1141)
Q Consensus 171 Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~-~l~~------l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N 243 (1141)
+..+.....+..++.+.+|+.|.+.+..+.++.. .... +++|..+...+...-..+...--.++|+.|.+...
T Consensus 701 ~~~~~~~~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~r~l~~~~f~~~L~~l~l~~~ 780 (889)
T KOG4658|consen 701 IEGCSKRTLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHMLRDLTWLLFAPHLTSLSLVSC 780 (889)
T ss_pred hcccccceeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhccccccccchhhccCcccEEEEecc
Confidence 3344444556667778888888888777764321 1111 11122221111111122222223466777777655
Q ss_pred CCCCCCcccccCCCCCCEEEccCCcCCC
Q 001143 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 244 ~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
.....+......+..+..+-+..+.+.+
T Consensus 781 ~~~e~~i~~~k~~~~l~~~i~~f~~~~~ 808 (889)
T KOG4658|consen 781 RLLEDIIPKLKALLELKELILPFNKLEG 808 (889)
T ss_pred cccccCCCHHHHhhhcccEEeccccccc
Confidence 4433333244444555544444444444
No 489
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.58 E-value=3e-09 Score=104.19 Aligned_cols=117 Identities=21% Similarity=0.192 Sum_probs=88.8
Q ss_pred chhhhcCCCCCcEEEccCCCCCccCccc-cCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCC
Q 001143 156 LLSEIAGLKCLTKLSVCHFSIRYLPPEI-GCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQR 234 (1141)
Q Consensus 156 lp~~l~~L~~L~~L~Ls~N~L~~iP~~l-~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~ 234 (1141)
.+..+.....|+.++|++|.+..+|+.| ..++.++.|+|++|+|+.+|.++..++.|+.|+++.|.|...|.-+..|.+
T Consensus 45 avy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~~N~l~~~p~vi~~L~~ 124 (177)
T KOG4579|consen 45 AVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLRFNPLNAEPRVIAPLIK 124 (177)
T ss_pred HHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccccCccccchHHHHHHHh
Confidence 3444555667777888888888888877 455678888888888888888888888888888888888888888888888
Q ss_pred CCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCC
Q 001143 235 LENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYC 273 (1141)
Q Consensus 235 L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~ 273 (1141)
|..|+..+|.+..++-. +..-..+...++.+|+|.+.|
T Consensus 125 l~~Lds~~na~~eid~d-l~~s~~~al~~lgnepl~~~~ 162 (177)
T KOG4579|consen 125 LDMLDSPENARAEIDVD-LFYSSLPALIKLGNEPLGDET 162 (177)
T ss_pred HHHhcCCCCccccCcHH-HhccccHHHHHhcCCcccccC
Confidence 88888888888877664 333334444566777777643
No 490
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.57 E-value=5.8e-10 Score=132.39 Aligned_cols=179 Identities=27% Similarity=0.283 Sum_probs=123.2
Q ss_pred CccccCCcCCcEEEccCCCCCcCchhhcCC-CCCCEEEccCCCCCCCccccc----------CCCCCCEEECCCCCCCCC
Q 001143 84 PKSVGRYEKLRNLKFFGNEINLFPSEVGNL-LGLECLQIKISSPGVNGFALN----------KLKGLKELELSKVPPRPS 152 (1141)
Q Consensus 84 P~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L-~~L~~L~Ls~N~l~~~~~~~~----------~L~~L~~L~Ls~N~ln~~ 152 (1141)
|-.|..+.+|++|.|.+..|+.+-. +..| ..|+.|-. .|.+..+...|. ....|...+.+.|++.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~~G-L~~lr~qLe~LIC-~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-- 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTAKG-LQELRHQLEKLIC-HNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-- 177 (1096)
T ss_pred CceeccccceeeEEecCcchhhhhh-hHHHHHhhhhhhh-hccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH--
Confidence 4456677778888888887765321 1111 12333322 222222111111 1234666677775553
Q ss_pred cccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCcccccccc-ccCCCCCCEEEccCCCCCcCCcCccC
Q 001143 153 VLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGLYL 231 (1141)
Q Consensus 153 ~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~IP~~l~~ 231 (1141)
.+-.++.-++.|+.|+|++|+++.+- .+..++.|++|||+.|.|..+|.- ...++ |+.|.|++|.|+++ ..+.+
T Consensus 178 --~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL-~gie~ 252 (1096)
T KOG1859|consen 178 --LMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTL-RGIEN 252 (1096)
T ss_pred --hHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhh-hhHHh
Confidence 33345666788999999999999874 788899999999999999988742 33344 99999999999987 36888
Q ss_pred CCCCCEEeCCCCCCCCCCcc-cccCCCCCCEEEccCCcCCC
Q 001143 232 LQRLENLDLSNNRLTSLGSL-DLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 232 L~~L~~L~Ls~N~Lt~~~p~-~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
|++|+.|||+.|-|++...- .+..|..|..|+|.|||+.|
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c 293 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCC 293 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcccc
Confidence 99999999999998866432 25667889999999999988
No 491
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.57 E-value=2.8e-08 Score=85.63 Aligned_cols=59 Identities=46% Similarity=0.591 Sum_probs=34.8
Q ss_pred CCCEEEccCCCCCcCCc-CccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcC
Q 001143 211 ALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKL 269 (1141)
Q Consensus 211 ~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L 269 (1141)
+|++|+|++|+|+.||. .|..+++|+.|+|++|+|+.+++..|..+++|+.|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 45566666666665553 334466666666666666666665666666666666666653
No 492
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.55 E-value=2.9e-06 Score=99.17 Aligned_cols=224 Identities=16% Similarity=0.108 Sum_probs=144.3
Q ss_pred CceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCCCCCccccce
Q 001143 818 VSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQ 897 (1141)
Q Consensus 818 sfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~g~~~~~~~~ 897 (1141)
-..+.|+|...-...++-.+++........ .+. ..-+++++++.|+|||++.++|....+ ....
T Consensus 288 ~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~-nk~-----t~lve~wkkl~h~NvV~frevf~t~tF----------~D~S 351 (655)
T KOG3741|consen 288 FSITTYKATSNVDGNAYVLKRLHGDRDQST-NKD-----TSLVEAWKKLCHTNVVPFREVFLTYTF----------GDLS 351 (655)
T ss_pred ccceeEeeeeccCCceeeeeeeccccccCc-ccc-----hHHHHHHHHhccCceeehhhhhhhhcc----------Ccce
Confidence 345689988754444444444421111111 011 245778899999999999999885432 1235
Q ss_pred EEEEEeeccC-CCHHHHHHHhh----------hcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 898 SAIFMEYVKG-GSVKNYIEKLS----------ETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 898 ~~LVmEy~~g-gSL~~~I~~~~----------~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
+++|++|+++ ++|.++--... .......++..+|.++.|+..||.++|+.|+.-+-|.|.+|+++.+
T Consensus 352 lvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~-- 429 (655)
T KOG3741|consen 352 LVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGK-- 429 (655)
T ss_pred EEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCc--
Confidence 7999999985 47776542111 1223468889999999999999999999999999999999999876
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1046 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk 1046 (1141)
..++|..-|....+.... . |.+.+ -++-|.-.||.+++.|.||.
T Consensus 430 -----~RIriS~C~i~Dvl~~d~----------------------~--~~le~-------~Qq~D~~~lG~ll~aLAt~~ 473 (655)
T KOG3741|consen 430 -----MRIRISGCGIMDVLQEDP----------------------T--EPLES-------QQQNDLRDLGLLLLALATGT 473 (655)
T ss_pred -----ceEEEecccceeeecCCC----------------------C--cchhH-------HhhhhHHHHHHHHHHHhhcc
Confidence 567766555443222100 0 11222 15779999999999999995
Q ss_pred CC-CCCCCHHHH-HHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHH
Q 001143 1047 VP-YMGLSELEI-HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGD 1124 (1141)
Q Consensus 1047 ~P-f~~~~~~el-~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~E 1124 (1141)
.- +......+. .+.|. ...+.++++++.-....++++ -++.+
T Consensus 474 ~ns~~~d~~~~s~~~~I~-----------------------------------~~yS~D~rn~v~yl~s~~~~~-ksI~~ 517 (655)
T KOG3741|consen 474 ENSNRTDSTQSSHLTRIT-----------------------------------TTYSTDLRNVVEYLESLNFRE-KSIQD 517 (655)
T ss_pred cccccccchHHHHHHHhh-----------------------------------hhhhHHHHHHHHHHHhcCccc-ccHHH
Confidence 32 222222221 12211 145566777888777777776 67777
Q ss_pred HHHHHHh
Q 001143 1125 LYEMFVA 1131 (1141)
Q Consensus 1125 lL~~L~~ 1131 (1141)
++.+...
T Consensus 518 llp~~~~ 524 (655)
T KOG3741|consen 518 LLPMIGS 524 (655)
T ss_pred HHHHHHH
Confidence 7776543
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.50 E-value=4.8e-07 Score=99.07 Aligned_cols=141 Identities=18% Similarity=0.187 Sum_probs=103.0
Q ss_pred eEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChH--------------HHHHhHHhHHHHHHHHhhCCCC--Cc
Q 001143 809 SSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSAD--------------EIRNFEYSCLGEVRMLGALRHS--CI 871 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~--------------~~~~~~~~~~~Ei~iL~~L~Hp--NI 871 (1141)
.++..||-|--+.||.|... +.++++|.-++-.++...- ....-....++|.++|.+|... .+
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 67899999999999999984 8899999866543322110 0011122457899999999644 67
Q ss_pred cceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Q 001143 872 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMH 951 (1141)
Q Consensus 872 Vkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvH 951 (1141)
.+.+++- ..++||||++|--|... +++.+....++..|+.-+..+-..||||
T Consensus 174 P~P~~~n------------------RHaVvMe~ieG~eL~~~----------r~~~en~~~il~~il~~~~~~~~~GiVH 225 (304)
T COG0478 174 PKPIAWN------------------RHAVVMEYIEGVELYRL----------RLDVENPDEILDKILEEVRKAYRRGIVH 225 (304)
T ss_pred CCccccc------------------cceeeeehcccceeecc----------cCcccCHHHHHHHHHHHHHHHHHcCccc
Confidence 7766542 23899999998665433 2234555666777777777777899999
Q ss_pred cCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 952 RDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 952 rDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
||+.+-||+++++ |.++++||-.+..
T Consensus 226 GDlSefNIlV~~d-------g~~~vIDwPQ~v~ 251 (304)
T COG0478 226 GDLSEFNILVTED-------GDIVVIDWPQAVP 251 (304)
T ss_pred cCCchheEEEecC-------CCEEEEeCccccc
Confidence 9999999999998 7899999987754
No 494
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.49 E-value=8.5e-08 Score=82.65 Aligned_cols=57 Identities=28% Similarity=0.410 Sum_probs=28.7
Q ss_pred CccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcCc-hhhcCCCCCCEEEccCCC
Q 001143 69 SVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFP-SEVGNLLGLECLQIKISS 125 (1141)
Q Consensus 69 ~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~lP-~~~~~L~~L~~L~Ls~N~ 125 (1141)
+|++|+|++|+|+.||. .|..+++|++|+|++|+|+.+| ..|.++++|+.|++++|+
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 34555555555555543 3445555555555555555443 234555555555555543
No 495
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.48 E-value=5.8e-09 Score=124.13 Aligned_cols=131 Identities=23% Similarity=0.227 Sum_probs=107.9
Q ss_pred CCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCc-CccCCCCCCEEeCCC
Q 001143 164 KCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSN 242 (1141)
Q Consensus 164 ~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~ 242 (1141)
..|...++++|.|..+-..+.-++.|+.|+|++|+++... .+..|+.|++|||+.|.|+.+|. +...+. |+.|.|+|
T Consensus 164 n~L~~a~fsyN~L~~mD~SLqll~ale~LnLshNk~~~v~-~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrn 241 (1096)
T KOG1859|consen 164 NKLATASFSYNRLVLMDESLQLLPALESLNLSHNKFTKVD-NLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRN 241 (1096)
T ss_pred hhHhhhhcchhhHHhHHHHHHHHHHhhhhccchhhhhhhH-HHHhcccccccccccchhccccccchhhhh-heeeeecc
Confidence 4577889999999988888888999999999999999875 88899999999999999999984 233355 99999999
Q ss_pred CCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCc
Q 001143 243 NRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSS 299 (1141)
Q Consensus 243 N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~ 299 (1141)
|-++.+- .+.+|.+|..|||++|-|.+..++- .+..+.++..+-+.+|.+||..
T Consensus 242 N~l~tL~--gie~LksL~~LDlsyNll~~hseL~-pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 242 NALTTLR--GIENLKSLYGLDLSYNLLSEHSELE-PLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred cHHHhhh--hHHhhhhhhccchhHhhhhcchhhh-HHHHHHHHHHHhhcCCccccCH
Confidence 9999885 4789999999999999998865542 2334455666777778777754
No 496
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.48 E-value=1.1e-06 Score=95.02 Aligned_cols=111 Identities=23% Similarity=0.237 Sum_probs=85.0
Q ss_pred hHHHHHHHHhhCC--CCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCC-CHHHHHHHhhhcCCCCCCHHHHH
Q 001143 855 SCLGEVRMLGALR--HSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGG-SVKNYIEKLSETGEKHVSVKLAL 931 (1141)
Q Consensus 855 ~~~~Ei~iL~~L~--HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~gg-SL~~~I~~~~~~~~~~Ls~~~i~ 931 (1141)
+..+|...+..+. .=.+++.+++.+..... ....++|||++++. +|.+++... ...+.....
T Consensus 57 ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~----------~~~s~lite~l~~~~~L~~~~~~~-----~~~~~~~~~ 121 (206)
T PF06293_consen 57 RAKREWRNLQRLREAGIPTPEPVAYGERRKGG----------GYRSYLITEALPGAQDLRDLLQQW-----EQLDPSQRR 121 (206)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCC----------ceeEEEEEEeCCCcccHHHHHHhh-----cccchhhHH
Confidence 3468888887775 34456777776653211 13568999999974 899998762 126667788
Q ss_pred HHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 932 FIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 932 ~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
.++.+++..+.-||..||+|+|+++.|||++.+. +...+.++||+.++.
T Consensus 122 ~ll~~l~~~i~~lH~~gi~H~Dl~~~NILv~~~~----~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 122 ELLRALARLIAKLHDAGIYHGDLNPSNILVDPDD----GQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHHHHHHHHHCcCCCCCCCcccEEEeCCC----CceeEEEEcchhcee
Confidence 9999999999999999999999999999998872 235799999997753
No 497
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.47 E-value=3.7e-08 Score=118.53 Aligned_cols=162 Identities=19% Similarity=0.197 Sum_probs=112.3
Q ss_pred HHHHHHHHHHHC-CccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccch
Q 001143 936 DVAAALVELHSK-HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAP 1014 (1141)
Q Consensus 936 QIa~gL~yLHs~-gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 1014 (1141)
+++.|+.|+|.. ++||++|.|++|.++.. +.+||+.|+++......... .........+....-...|.||
T Consensus 107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~-------~~wkl~Gf~f~v~~~~~~~~-p~~~yd~~lp~~~~~~~~f~ap 178 (700)
T KOG2137|consen 107 NVADGLAFLHRSAKVVHGNIQPEAIVVNAN-------GDWKLAGFSFCVNANGPTEY-PFSEYDPPLPLLLQPHLNFLAP 178 (700)
T ss_pred cccchhhhhccCcceeecccchhheeeccC-------cceeeccchhhhccCCCCcc-ccccCCCCCChhhccCcccccc
Confidence 344999999965 89999999999999988 88999999998765443221 1222233344455677889999
Q ss_pred hhhccccCCCCCCchhhHHHHHHHHHHHH-hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCC
Q 001143 1015 EVLRAMHKPNLYGLEVDIWSYGCLLLELL-TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK 1093 (1141)
Q Consensus 1015 E~l~~~~~~~~~s~ksDVWSLGviL~ELL-TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~ 1093 (1141)
|++.. ...+.++|+||+||++|.+. .|+.-+......... ....... ... ....+
T Consensus 179 E~~~~----~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~-~~~~~~~-~~~-----------------~~~~s- 234 (700)
T KOG2137|consen 179 EYLLG----TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSY-SFSRNLL-NAG-----------------AFGYS- 234 (700)
T ss_pred hhhcc----ccccccccceeeeeEEEEEecCCcchhhccCCcchh-hhhhccc-ccc-----------------ccccc-
Confidence 99987 45679999999999999988 466555433221111 1111100 000 00000
Q ss_pred chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1094 PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1094 ~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
...+.++++=+.+++..++..||++.++...++|..
T Consensus 235 ----~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D 270 (700)
T KOG2137|consen 235 ----NNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSD 270 (700)
T ss_pred ----ccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCC
Confidence 156778999999999999999999999888877754
No 498
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.44 E-value=8.3e-06 Score=93.21 Aligned_cols=274 Identities=17% Similarity=0.141 Sum_probs=157.9
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~~~ 887 (1141)
.....||+|+.+.+|-.-.-. +.+.||+... ....+ .+-++.|.+. .||-+-.-+.+=.. .-+
T Consensus 14 ~~gr~LgqGgea~ly~l~e~~-d~VAKIYh~P-----ppa~~------aqk~a~la~~p~~p~~~~rvaWPqa-~L~--- 77 (637)
T COG4248 14 PPGRPLGQGGEADLYTLGEVR-DQVAKIYHAP-----PPAAQ------AQKVAELAATPDAPLLNYRVAWPQA-TLH--- 77 (637)
T ss_pred CCCccccCCccceeeecchhh-chhheeecCC-----CchHH------HHHHHHhccCCCCcchhhhhcccHH-Hhh---
Confidence 456789999999999643322 2345665322 11111 1234445455 57755432222111 000
Q ss_pred CCCCccccceEEEEEeeccCCC-HHHHHH-HhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGS-VKNYIE-KLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggS-L~~~I~-~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
..+......+.|+.++|.- ...+.. +.+........|.-.++.++.++.+...||..|.+-||+.++|+|+.++
T Consensus 78 ---G~~~~~~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~- 153 (637)
T COG4248 78 ---GGRRGKVIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDD- 153 (637)
T ss_pred ---CCCccceeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecC-
Confidence 1112223689999988652 222221 1112234468899999999999999999999999999999999999988
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhc-cccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR-AMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.|.|.|=..-....... ...-.+|...|.+||... ..-.+..-+...|.|.|||++++++.
T Consensus 154 ------~~V~LVdsDsfqi~~ng~-----------~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ 216 (637)
T COG4248 154 ------SKVVLVDSDSFQINANGT-----------LHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLF 216 (637)
T ss_pred ------ceEEEEcccceeeccCCc-----------eEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHh
Confidence 678888754322111110 111346899999999865 21112234578999999999999998
Q ss_pred C-CCCCCCCCHH-----HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhccc--CC
Q 001143 1045 L-QVPYMGLSEL-----EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE--NP 1116 (1141)
Q Consensus 1045 G-k~Pf~~~~~~-----el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~--DP 1116 (1141)
| .+||.+.... .....|..+.....++. .......+.+.|- .-.++.+..+..+|+.. ++
T Consensus 217 ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~----------~~g~~p~P~~~P~--~~Lpp~vqAlF~qaF~~~~~~ 284 (637)
T COG4248 217 GGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQ----------RRGLKPPPRSIPL--SMLPPDVQALFQQAFTESGVA 284 (637)
T ss_pred cCCCCCCcccccCCCCCcchhhhhcceeeechhc----------cCCCCCCCCCCCh--hhcCHHHHHHHHHHhcccCCC
Confidence 6 9999863210 00112222221111100 0000001111111 13456788888999864 35
Q ss_pred CCCCCHHHHHHHHHh
Q 001143 1117 TERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~ 1131 (1141)
.-|||++..+..+-.
T Consensus 285 ~~RP~a~aW~aAl~a 299 (637)
T COG4248 285 TPRPTAKAWVAALDA 299 (637)
T ss_pred CCCCCHHHHHHHHHH
Confidence 689999887776544
No 499
>PRK09902 hypothetical protein; Provisional
Probab=98.40 E-value=4.5e-06 Score=89.56 Aligned_cols=148 Identities=15% Similarity=0.102 Sum_probs=100.2
Q ss_pred cccCceEEEEEEECCccEEEEEEecccCCC-C-hHHHHHhHHhHHHHHHHHhhCC--CCCccceeeeEecCCCCCCCCCC
Q 001143 815 GKSVSSSLFRCKFGSADAAAKVRTLKVCGS-S-ADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSKWLPSADGN 890 (1141)
Q Consensus 815 G~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~-~-~~~~~~~~~~~~~Ei~iL~~L~--HpNIVkllg~~~~~~~~~~~~g~ 890 (1141)
|+||.+.|++....+..+-+|--....... . +-.. ..|.+|+..+.++. .-.+.++. ++....
T Consensus 27 ~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~----ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k-------- 93 (216)
T PRK09902 27 RRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGR----PTIVREVAVIKELERAGVIVPKIV-FGEAVK-------- 93 (216)
T ss_pred CCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCc----hHHHHHHHHHHHHHHcCCCCCccc-eeeeec--------
Confidence 458888899988777666666422111110 0 0112 23479999998885 33355555 332111
Q ss_pred CccccceEEEEEeeccC-CCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCC
Q 001143 891 PEHHLLQSAIFMEYVKG-GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKAD 969 (1141)
Q Consensus 891 ~~~~~~~~~LVmEy~~g-gSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~ 969 (1141)
.....+.+||+|-++| .||.+++.+ ....+.+......++.+++..+.-||+.|+.|+|+.+.||+++.++
T Consensus 94 -~~~~~rA~LVTe~L~g~~~L~~~l~~---~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g---- 165 (216)
T PRK09902 94 -IEGEWRALLVTEDMAGFISIADWYAQ---HAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG---- 165 (216)
T ss_pred -cCCceEEEEEEEeCCCCccHHHHHhc---CCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC----
Confidence 0123467899998764 489998765 2223567888889999999999999999999999999999998552
Q ss_pred CCCeEEEeecccccc
Q 001143 970 GKPVVKLCDFDRAVP 984 (1141)
Q Consensus 970 ~~~~vKL~DFGlA~~ 984 (1141)
...++++||.-++.
T Consensus 166 -~~~v~lIDlEk~r~ 179 (216)
T PRK09902 166 -KAEAGFLDLEKSRR 179 (216)
T ss_pred -CeeEEEEEhhccch
Confidence 14599999997653
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.33 E-value=2.6e-08 Score=97.76 Aligned_cols=127 Identities=17% Similarity=0.085 Sum_probs=62.5
Q ss_pred ccEEEeecCCCCccCccc---cCCcCCcEEEccCCCCCcCchhhcC-CCCCCEEEccCCCCCCCcccccCCCCCCEEECC
Q 001143 70 VEGLYLYKNVLNLIPKSV---GRYEKLRNLKFFGNEINLFPSEVGN-LLGLECLQIKISSPGVNGFALNKLKGLKELELS 145 (1141)
Q Consensus 70 L~~L~Ls~N~Lt~iP~~l---~~L~~L~~L~Ls~N~L~~lP~~~~~-L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls 145 (1141)
+-.|+|+++.|..|++.. .....|+..+|++|.+..+|..|.. .+.++.|+|++|.+..+|..+..++.|+.|+++
T Consensus 29 ~h~ldLssc~lm~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neisdvPeE~Aam~aLr~lNl~ 108 (177)
T KOG4579|consen 29 LHFLDLSSCQLMYIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEISDVPEELAAMPALRSLNLR 108 (177)
T ss_pred hhhcccccchhhHHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhhhchHHHhhhHHhhhcccc
Confidence 334555555555444432 2222344445555555555555433 234555555555555555444455555555555
Q ss_pred CCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccc
Q 001143 146 KVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMK 200 (1141)
Q Consensus 146 ~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~ 200 (1141)
.|+++ ..|..+..|.+|.+|+..+|.+..||-++.--+++-...|.+|.+.
T Consensus 109 ~N~l~----~~p~vi~~L~~l~~Lds~~na~~eid~dl~~s~~~al~~lgnepl~ 159 (177)
T KOG4579|consen 109 FNPLN----AEPRVIAPLIKLDMLDSPENARAEIDVDLFYSSLPALIKLGNEPLG 159 (177)
T ss_pred cCccc----cchHHHHHHHhHHHhcCCCCccccCcHHHhccccHHHHHhcCCccc
Confidence 54443 3344455566667777777777766665432223333344444444
Done!