Query 001143
Match_columns 1141
No_of_seqs 913 out of 4027
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 13:11:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/001143.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/001143hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b9d_A Serine/threonine-protei 100.0 1.3E-50 4.5E-55 465.4 24.8 261 802-1133 20-282 (350)
2 4fih_A Serine/threonine-protei 100.0 5.2E-50 1.8E-54 459.8 24.2 256 806-1135 74-331 (346)
3 3fpq_A Serine/threonine-protei 100.0 4E-49 1.4E-53 443.2 25.4 258 808-1134 28-289 (290)
4 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.8E-49 6.2E-54 449.0 22.5 260 804-1134 30-297 (311)
5 3omv_A RAF proto-oncogene seri 100.0 2.3E-48 7.8E-53 440.3 29.2 266 803-1134 33-300 (307)
6 3hyh_A Carbon catabolite-derep 100.0 9.6E-49 3.3E-53 436.7 25.6 257 804-1134 11-269 (275)
7 4fie_A Serine/threonine-protei 100.0 6.6E-49 2.2E-53 461.3 24.6 256 806-1135 151-408 (423)
8 4asz_A BDNF/NT-3 growth factor 100.0 2.2E-48 7.4E-53 439.5 25.6 261 804-1132 11-287 (299)
9 4gt4_A Tyrosine-protein kinase 100.0 4E-48 1.4E-52 439.1 26.8 264 802-1132 22-304 (308)
10 4aoj_A High affinity nerve gro 100.0 4.8E-48 1.6E-52 442.4 27.6 263 804-1134 39-319 (329)
11 3ubd_A Ribosomal protein S6 ki 100.0 3.6E-49 1.2E-53 446.1 16.3 257 803-1133 21-287 (304)
12 4g3f_A NF-kappa-beta-inducing 100.0 2.4E-48 8.4E-53 444.6 17.8 255 804-1131 56-313 (336)
13 4b99_A Mitogen-activated prote 100.0 4.4E-46 1.5E-50 436.7 26.7 292 806-1133 54-350 (398)
14 4ase_A Vascular endothelial gr 100.0 1.1E-45 3.7E-50 426.6 24.3 263 804-1132 62-345 (353)
15 4g31_A Eukaryotic translation 100.0 9.3E-46 3.2E-50 418.2 22.1 277 806-1134 5-286 (299)
16 3hmm_A TGF-beta receptor type- 100.0 1.7E-45 5.7E-50 417.0 23.8 268 806-1133 3-296 (303)
17 4f9c_A Cell division cycle 7-r 100.0 8.3E-44 2.8E-48 412.6 22.9 286 806-1133 21-358 (361)
18 3uto_A Twitchin; kinase, muscl 100.0 1.2E-43 4.1E-48 434.8 25.0 260 805-1134 156-417 (573)
19 3v5w_A G-protein coupled recep 100.0 5.4E-44 1.9E-48 437.7 21.5 261 802-1133 185-455 (689)
20 3fe3_A MAP/microtubule affinit 100.0 4.6E-41 1.6E-45 384.5 25.6 258 803-1134 12-271 (328)
21 3fxz_A Serine/threonine-protei 100.0 3.7E-41 1.3E-45 379.0 23.6 259 805-1137 19-279 (297)
22 2yab_A Death-associated protei 100.0 1.5E-40 5.3E-45 385.3 24.3 265 806-1133 12-278 (361)
23 3zgw_A Maternal embryonic leuc 100.0 2.8E-40 9.6E-45 381.2 24.6 257 805-1134 9-267 (347)
24 3txo_A PKC-L, NPKC-ETA, protei 100.0 2.2E-40 7.5E-45 382.8 23.7 259 802-1133 19-286 (353)
25 1o6l_A RAC-beta serine/threoni 100.0 4.9E-40 1.7E-44 377.5 26.2 257 804-1133 3-266 (337)
26 1tki_A Titin; serine kinase, m 100.0 3.9E-40 1.3E-44 375.3 25.2 259 805-1134 4-264 (321)
27 3o0g_A Cell division protein k 100.0 7.6E-40 2.6E-44 366.0 25.8 284 805-1133 1-288 (292)
28 2bdw_A Hypothetical protein K1 100.0 8.6E-40 2.9E-44 378.9 26.5 260 806-1133 29-290 (362)
29 3niz_A Rhodanese family protei 100.0 6.7E-40 2.3E-44 371.1 24.7 287 803-1135 18-308 (311)
30 3p86_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 368.9 26.9 261 803-1133 34-297 (309)
31 3soa_A Calcium/calmodulin-depe 100.0 1.2E-39 3.9E-44 388.1 27.6 261 806-1133 11-273 (444)
32 1fot_A TPK1 delta, CAMP-depend 100.0 9.5E-40 3.2E-44 372.0 25.7 255 803-1133 3-264 (318)
33 3a62_A Ribosomal protein S6 ki 100.0 9.3E-40 3.2E-44 372.8 25.4 260 802-1133 13-282 (327)
34 2y0a_A Death-associated protei 100.0 9.1E-40 3.1E-44 372.7 25.0 264 806-1134 11-278 (326)
35 3fdn_A Serine/threonine-protei 100.0 1.4E-39 4.8E-44 361.2 25.4 259 803-1136 6-266 (279)
36 1ob3_A PFPK5, cell division co 100.0 9.9E-40 3.4E-44 364.7 23.6 283 805-1133 1-286 (288)
37 3c0i_A Peripheral plasma membr 100.0 1.9E-39 6.5E-44 374.0 26.6 266 806-1133 24-292 (351)
38 3kk8_A Calcium/calmodulin depe 100.0 2.9E-39 9.9E-44 358.8 26.0 265 805-1137 5-271 (284)
39 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.2E-39 7.6E-44 373.9 25.4 256 802-1133 37-299 (350)
40 1xjd_A Protein kinase C, theta 100.0 1E-39 3.5E-44 376.1 22.5 259 802-1133 13-275 (345)
41 2c30_A Serine/threonine-protei 100.0 2.9E-39 9.8E-44 367.8 25.2 254 808-1135 47-302 (321)
42 4agu_A Cyclin-dependent kinase 100.0 4.7E-39 1.6E-43 362.2 26.5 285 805-1134 2-291 (311)
43 4eqm_A Protein kinase; transfe 100.0 1E-38 3.5E-43 358.3 28.0 261 805-1132 10-273 (294)
44 3f3z_A Calcium/calmodulin-depe 100.0 4.6E-39 1.6E-43 356.3 24.7 260 806-1136 9-270 (277)
45 3a8x_A Protein kinase C IOTA t 100.0 5.8E-39 2E-43 369.6 26.5 260 801-1133 4-281 (345)
46 3dtc_A Mitogen-activated prote 100.0 4.6E-39 1.6E-43 354.8 24.2 262 804-1131 5-270 (271)
47 2i0e_A Protein kinase C-beta I 100.0 5.4E-39 1.8E-43 371.3 25.8 259 802-1133 16-282 (353)
48 3gbz_A Kinase, CMGC CDK; ssgci 100.0 3.2E-39 1.1E-43 368.2 23.6 292 802-1135 30-326 (329)
49 4hcu_A Tyrosine-protein kinase 100.0 6.3E-39 2.2E-43 354.0 25.2 257 804-1134 8-266 (269)
50 3h4j_B AMPK kdaid, SNF1-like p 100.0 6.2E-40 2.1E-44 376.6 17.5 259 802-1134 5-265 (336)
51 3kul_A Ephrin type-A receptor 100.0 6.4E-39 2.2E-43 365.6 25.7 261 804-1134 47-313 (325)
52 3g33_A Cell division protein k 100.0 4.8E-39 1.6E-43 362.3 24.3 291 805-1134 8-303 (308)
53 3ttj_A Mitogen-activated prote 100.0 6.1E-39 2.1E-43 384.1 26.6 284 805-1133 61-361 (464)
54 3v8s_A RHO-associated protein 100.0 2.1E-39 7.1E-44 382.0 22.1 265 804-1134 67-336 (410)
55 2zv2_A Calcium/calmodulin-depe 100.0 2.2E-39 7.4E-44 363.4 21.2 268 803-1132 10-297 (298)
56 3tki_A Serine/threonine-protei 100.0 1.7E-39 5.8E-44 370.2 20.6 261 804-1134 5-268 (323)
57 4dc2_A Protein kinase C IOTA t 100.0 4.7E-39 1.6E-43 377.3 24.6 259 802-1133 48-324 (396)
58 3llt_A Serine/threonine kinase 100.0 9.1E-39 3.1E-43 368.0 26.6 284 805-1132 34-360 (360)
59 3gni_B Strad alpha; kinase fol 100.0 5.3E-39 1.8E-43 374.7 24.4 297 803-1134 22-340 (389)
60 3lb7_A RAF proto-oncogene seri 100.0 2E-38 6.8E-43 358.6 28.3 269 803-1136 33-302 (307)
61 2y7j_A Phosphorylase B kinase 100.0 1.6E-38 5.5E-43 368.4 28.2 266 806-1132 94-364 (365)
62 2psq_A Fibroblast growth facto 100.0 1.5E-38 5E-43 369.5 27.8 262 804-1132 79-362 (370)
63 3soc_A Activin receptor type-2 100.0 8.5E-39 2.9E-43 363.6 25.1 284 804-1133 22-317 (322)
64 2pmi_A Negative RE, cyclin-dep 100.0 8E-39 2.7E-43 363.1 24.8 288 804-1134 3-300 (317)
65 2eue_A Carbon catabolite derep 100.0 6.3E-39 2.2E-43 355.1 23.1 258 803-1134 10-269 (275)
66 2vgo_A Serine/threonine-protei 100.0 1.1E-38 3.9E-43 354.7 25.1 260 802-1136 10-271 (284)
67 3oz6_A Mitogen-activated prote 100.0 7.6E-39 2.6E-43 373.4 24.6 293 805-1133 8-334 (388)
68 2a2a_A Death-associated protei 100.0 9.1E-39 3.1E-43 362.7 24.5 265 806-1133 12-278 (321)
69 1t4h_A Serine/threonine-protei 100.0 1.5E-38 5E-43 355.0 25.7 260 806-1134 26-289 (290)
70 4aaa_A Cyclin-dependent kinase 100.0 4.4E-39 1.5E-43 366.9 21.8 291 799-1134 18-313 (331)
71 2r5t_A Serine/threonine-protei 100.0 8E-39 2.7E-43 372.6 24.3 259 802-1133 34-299 (373)
72 3l9p_A Anaplastic lymphoma kin 100.0 9E-39 3.1E-43 370.8 24.6 268 802-1133 67-344 (367)
73 3is5_A Calcium-dependent prote 100.0 1.3E-38 4.5E-43 355.3 24.7 261 806-1133 22-284 (285)
74 1kob_A Twitchin; kinase, intra 100.0 7.3E-39 2.5E-43 374.7 23.7 260 805-1134 50-311 (387)
75 1cm8_A Phosphorylated MAP kina 100.0 1.4E-38 4.9E-43 369.2 25.9 285 805-1134 24-314 (367)
76 4fr4_A YANK1, serine/threonine 100.0 1.3E-38 4.4E-43 372.2 25.4 261 802-1133 11-277 (384)
77 1luf_A Muscle-specific tyrosin 100.0 1.9E-38 6.4E-43 362.0 26.2 264 804-1134 45-335 (343)
78 4ejn_A RAC-alpha serine/threon 100.0 4.2E-39 1.5E-43 383.0 21.7 258 803-1133 145-410 (446)
79 3hko_A Calcium/calmodulin-depe 100.0 9.7E-39 3.3E-43 365.0 23.7 275 806-1135 26-338 (345)
80 3mwu_A Calmodulin-domain prote 100.0 1.2E-38 4.1E-43 383.2 25.5 262 806-1136 22-285 (486)
81 2w5a_A Serine/threonine-protei 100.0 8.1E-39 2.8E-43 354.3 22.0 265 803-1134 3-274 (279)
82 3mi9_A Cell division protein k 100.0 2.1E-38 7.2E-43 364.0 26.1 300 803-1135 14-319 (351)
83 2x4f_A Myosin light chain kina 100.0 1.5E-38 5.2E-43 370.0 25.2 255 809-1133 92-348 (373)
84 3kmu_A ILK, integrin-linked ki 100.0 1.9E-38 6.5E-43 348.7 24.6 261 802-1133 6-269 (271)
85 3uc3_A Serine/threonine-protei 100.0 2E-38 6.9E-43 367.2 26.0 258 803-1134 17-281 (361)
86 3ork_A Serine/threonine protei 100.0 1.3E-38 4.5E-43 359.8 23.8 267 805-1133 11-279 (311)
87 3lij_A Calcium/calmodulin depe 100.0 1.4E-38 4.9E-43 383.4 25.4 259 806-1133 37-297 (494)
88 3mtl_A Cell division protein k 100.0 6.9E-39 2.4E-43 364.7 20.9 284 805-1134 1-288 (324)
89 3rp9_A Mitogen-activated prote 100.0 2.5E-38 8.6E-43 377.3 26.7 298 805-1134 52-403 (458)
90 1ua2_A CAK, cell division prot 100.0 1.3E-38 4.5E-43 365.7 23.4 287 805-1134 9-298 (346)
91 3kn6_A Ribosomal protein S6 ki 100.0 1.1E-38 3.6E-43 364.0 22.3 261 807-1139 9-282 (325)
92 2y94_A 5'-AMP-activated protei 100.0 1.4E-38 4.7E-43 381.8 24.4 260 802-1134 12-273 (476)
93 3bhy_A Death-associated protei 100.0 2.5E-38 8.4E-43 351.2 24.5 265 806-1133 5-271 (283)
94 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.1E-38 7.1E-43 349.3 23.7 255 805-1133 7-263 (268)
95 2qr7_A Ribosomal protein S6 ki 100.0 1.5E-38 5.1E-43 365.8 22.8 257 805-1133 21-283 (342)
96 3gen_A Tyrosine-protein kinase 100.0 3E-38 1E-42 350.8 24.5 256 803-1132 21-278 (283)
97 4euu_A Serine/threonine-protei 100.0 4.4E-38 1.5E-42 356.6 26.0 290 806-1133 9-308 (319)
98 3fme_A Dual specificity mitoge 100.0 2.8E-38 9.7E-43 351.5 24.0 265 804-1134 5-273 (290)
99 1mp8_A Focal adhesion kinase 1 100.0 4.8E-38 1.6E-42 349.5 25.6 258 804-1132 13-274 (281)
100 3qd2_B Eukaryotic translation 100.0 1.6E-38 5.6E-43 359.7 22.2 280 805-1133 5-331 (332)
101 3q5i_A Protein kinase; CDPK, m 100.0 3.7E-38 1.3E-42 380.8 26.7 268 805-1135 35-309 (504)
102 3nyv_A Calmodulin-domain prote 100.0 1.7E-38 5.7E-43 381.5 23.5 261 806-1134 26-288 (484)
103 2w4o_A Calcium/calmodulin-depe 100.0 1.6E-38 5.5E-43 366.2 22.4 258 806-1135 53-313 (349)
104 2r3i_A Cell division protein k 100.0 5.2E-38 1.8E-42 351.3 25.9 285 804-1135 1-291 (299)
105 3p1a_A MYT1 kinase, membrane-a 100.0 5.6E-38 1.9E-42 355.1 26.2 251 806-1133 57-310 (311)
106 2h6d_A 5'-AMP-activated protei 100.0 4.8E-38 1.6E-42 347.6 25.0 260 803-1135 8-269 (276)
107 1x8b_A WEE1HU, WEE1-like prote 100.0 3.1E-38 1.1E-42 349.4 23.5 262 806-1135 11-287 (289)
108 2rku_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 351.0 25.7 260 802-1134 11-272 (294)
109 3cok_A Serine/threonine-protei 100.0 7.7E-39 2.6E-43 354.7 18.5 261 804-1136 9-271 (278)
110 3eb0_A Putative uncharacterize 100.0 3.7E-38 1.3E-42 367.2 25.1 295 805-1133 6-327 (383)
111 2xrw_A Mitogen-activated prote 100.0 9.2E-38 3.1E-42 362.5 28.3 285 805-1133 24-324 (371)
112 3tt0_A Basic fibroblast growth 100.0 7.5E-38 2.6E-42 364.7 27.6 261 805-1132 68-350 (382)
113 3i6u_A CDS1, serine/threonine- 100.0 1E-38 3.5E-43 377.0 20.5 269 805-1133 134-405 (419)
114 2vd5_A DMPK protein; serine/th 100.0 2.6E-38 8.9E-43 372.9 23.6 267 804-1134 59-334 (412)
115 3cbl_A C-FES, proto-oncogene t 100.0 2.3E-38 7.7E-43 368.6 22.7 257 805-1132 113-372 (377)
116 1u5q_A Serine/threonine protei 100.0 7.1E-38 2.4E-42 360.9 26.6 257 806-1135 54-313 (348)
117 3ugc_A Tyrosine-protein kinase 100.0 4E-38 1.4E-42 352.3 23.8 275 805-1132 9-289 (295)
118 4aw2_A Serine/threonine-protei 100.0 1.8E-38 6.1E-43 377.0 22.2 267 805-1134 73-345 (437)
119 2ivs_A Proto-oncogene tyrosine 100.0 8.4E-38 2.9E-42 351.8 26.4 261 805-1132 22-309 (314)
120 3q4u_A Activin receptor type-1 100.0 5.3E-38 1.8E-42 351.2 24.0 265 805-1131 7-299 (301)
121 2wtk_C Serine/threonine-protei 100.0 5.8E-38 2E-42 352.0 24.3 266 805-1135 4-271 (305)
122 3t9t_A Tyrosine-protein kinase 100.0 9.9E-38 3.4E-42 342.9 25.7 257 804-1134 6-264 (267)
123 2owb_A Serine/threonine-protei 100.0 7.6E-38 2.6E-42 357.8 25.6 260 802-1134 37-298 (335)
124 3vhe_A Vascular endothelial gr 100.0 4.6E-38 1.6E-42 361.4 23.9 263 804-1132 20-353 (359)
125 3eqc_A Dual specificity mitoge 100.0 4.9E-38 1.7E-42 362.2 24.2 279 803-1133 30-330 (360)
126 1k9a_A Carboxyl-terminal SRC k 100.0 5.1E-38 1.7E-42 374.5 25.0 253 804-1133 191-444 (450)
127 2ac3_A MAP kinase-interacting 100.0 6.7E-38 2.3E-42 353.6 24.7 272 805-1134 11-302 (316)
128 2jam_A Calcium/calmodulin-depe 100.0 7.3E-38 2.5E-42 352.0 24.8 259 806-1135 9-269 (304)
129 3an0_A Dual specificity mitoge 100.0 9.7E-38 3.3E-42 356.6 26.0 268 802-1136 47-319 (340)
130 3n9x_A Phosphotransferase; mal 100.0 9.4E-38 3.2E-42 370.2 26.9 298 805-1134 25-368 (432)
131 3qup_A Tyrosine-protein kinase 100.0 6.5E-38 2.2E-42 355.2 24.1 267 804-1130 21-294 (323)
132 1phk_A Phosphorylase kinase; g 100.0 1.4E-37 4.7E-42 347.8 26.5 272 803-1135 14-291 (298)
133 3dbq_A Dual specificity protei 100.0 7.7E-38 2.6E-42 358.9 24.9 260 806-1134 9-280 (343)
134 3poz_A Epidermal growth factor 100.0 5.2E-38 1.8E-42 358.0 23.1 257 804-1132 13-276 (327)
135 1j1b_A Glycogen synthase kinas 100.0 5.8E-38 2E-42 370.7 24.4 284 806-1133 54-342 (420)
136 4e7w_A Glycogen synthase kinas 100.0 7.5E-38 2.6E-42 366.6 24.7 285 806-1133 40-327 (394)
137 2fst_X Mitogen-activated prote 100.0 4E-38 1.4E-42 365.7 22.1 285 805-1133 28-317 (367)
138 1fvr_A Tyrosine-protein kinase 100.0 9.1E-38 3.1E-42 355.2 24.5 268 797-1132 16-298 (327)
139 1nxk_A MAP kinase-activated pr 100.0 3.7E-38 1.3E-42 370.1 21.4 262 805-1135 60-329 (400)
140 1qcf_A Haematopoetic cell kina 100.0 1E-37 3.4E-42 372.3 25.4 258 804-1135 186-445 (454)
141 3a7i_A MST3 kinase, serine/thr 100.0 8.1E-38 2.8E-42 351.1 23.1 256 805-1135 21-278 (303)
142 3cc6_A Protein tyrosine kinase 100.0 1.4E-37 4.9E-42 345.3 24.7 256 804-1132 10-271 (281)
143 1p4o_A Insulin-like growth fac 100.0 3.2E-37 1.1E-41 349.0 27.8 262 804-1132 23-297 (322)
144 3pfq_A PKC-B, PKC-beta, protei 100.0 1E-37 3.5E-42 389.6 26.1 259 802-1133 337-603 (674)
145 1u59_A Tyrosine-protein kinase 100.0 2.3E-37 7.9E-42 345.0 26.0 257 805-1132 8-270 (287)
146 2acx_A G protein-coupled recep 100.0 7.2E-38 2.5E-42 381.9 23.8 260 802-1133 180-450 (576)
147 3qyz_A Mitogen-activated prote 100.0 2.4E-37 8.1E-42 357.8 26.9 289 806-1134 27-320 (364)
148 3com_A Serine/threonine-protei 100.0 1.5E-37 5.1E-42 350.5 24.6 259 803-1135 26-286 (314)
149 1vzo_A Ribosomal protein S6 ki 100.0 3.5E-38 1.2E-42 364.1 19.7 263 802-1133 50-327 (355)
150 2x7f_A TRAF2 and NCK-interacti 100.0 1.1E-37 3.8E-42 353.4 23.5 269 804-1135 22-294 (326)
151 4fvq_A Tyrosine-protein kinase 100.0 6.8E-38 2.3E-42 348.7 21.3 262 804-1137 6-278 (289)
152 3og7_A AKAP9-BRAF fusion prote 100.0 1.5E-37 5.2E-42 347.1 24.1 263 805-1132 23-286 (289)
153 3kex_A Receptor tyrosine-prote 100.0 7.1E-38 2.4E-42 356.3 21.7 258 803-1132 10-274 (325)
154 2nru_A Interleukin-1 receptor- 100.0 9.8E-38 3.4E-42 350.8 22.6 270 808-1134 33-306 (307)
155 2eva_A TAK1 kinase - TAB1 chim 100.0 1.9E-37 6.6E-42 350.1 24.8 253 802-1132 4-261 (307)
156 2ycf_A Serine/threonine-protei 100.0 6.6E-38 2.3E-42 355.5 20.9 268 806-1133 10-280 (322)
157 1mqb_A Ephrin type-A receptor 100.0 4.9E-37 1.7E-41 351.0 28.3 260 803-1132 41-307 (333)
158 2qol_A Ephrin receptor; recept 100.0 1E-37 3.5E-42 363.0 22.9 259 804-1132 43-307 (373)
159 2i6l_A Mitogen-activated prote 100.0 5.2E-37 1.8E-41 345.5 28.0 300 806-1136 11-314 (320)
160 3kfa_A Tyrosine-protein kinase 100.0 1.3E-37 4.4E-42 346.3 22.7 255 804-1131 11-268 (288)
161 2izr_A Casein kinase I isoform 100.0 3.7E-37 1.3E-41 350.9 27.0 264 806-1131 9-278 (330)
162 3s95_A LIMK-1, LIM domain kina 100.0 3.7E-37 1.3E-41 347.3 26.6 267 804-1132 8-280 (310)
163 3e3p_A Protein kinase, putativ 100.0 3.3E-37 1.1E-41 354.4 26.7 292 803-1134 20-321 (360)
164 4f0f_A Serine/threonine-protei 100.0 2.7E-37 9.4E-42 343.8 25.1 267 800-1131 13-286 (287)
165 3lm5_A Serine/threonine-protei 100.0 5.5E-38 1.9E-42 357.7 19.5 261 807-1133 29-293 (327)
166 1t46_A HOMO sapiens V-KIT hard 100.0 2.8E-37 9.5E-42 347.4 24.9 263 804-1133 21-306 (313)
167 1opk_A P150, C-ABL, proto-onco 100.0 2.2E-37 7.7E-42 373.4 25.8 256 805-1133 219-477 (495)
168 1rjb_A FL cytokine receptor; k 100.0 1.3E-37 4.6E-42 355.7 22.6 264 804-1134 43-334 (344)
169 2b9h_A MAP kinase FUS3, mitoge 100.0 3.7E-37 1.3E-41 353.0 26.3 297 805-1134 10-312 (353)
170 3f66_A Hepatocyte growth facto 100.0 3.6E-37 1.2E-41 344.7 25.5 263 805-1133 24-290 (298)
171 3nsz_A CK II alpha, casein kin 100.0 4.1E-37 1.4E-41 349.4 26.3 282 802-1134 32-326 (330)
172 3lzb_A Epidermal growth factor 100.0 2.4E-37 8.1E-42 352.9 24.4 260 803-1132 12-276 (327)
173 2j7t_A Serine/threonine-protei 100.0 1.2E-37 4.2E-42 348.9 21.4 264 804-1135 17-283 (302)
174 3dls_A PAS domain-containing s 100.0 4.3E-38 1.5E-42 360.6 18.1 251 806-1134 24-281 (335)
175 1byg_A CSK, protein (C-termina 100.0 1.1E-37 3.6E-42 345.9 20.4 253 803-1132 18-271 (278)
176 3c4z_A Rhodopsin kinase; Ser/T 100.0 2.1E-37 7.2E-42 376.4 24.9 263 802-1133 181-454 (543)
177 2yex_A Serine/threonine-protei 100.0 8.4E-38 2.9E-42 345.2 19.5 263 805-1137 6-271 (276)
178 3brb_A Proto-oncogene tyrosine 100.0 4.3E-37 1.5E-41 346.8 25.6 268 804-1132 32-306 (313)
179 4exu_A Mitogen-activated prote 100.0 3.3E-37 1.1E-41 357.9 25.3 282 806-1133 42-329 (371)
180 1xbb_A Tyrosine-protein kinase 100.0 5.3E-37 1.8E-41 342.8 25.6 256 805-1131 15-276 (291)
181 1csn_A Casein kinase-1; phosph 100.0 9.3E-37 3.2E-41 340.7 27.6 267 805-1132 9-281 (298)
182 3kvw_A DYRK2, dual specificity 100.0 3.3E-37 1.1E-41 365.3 25.3 281 805-1134 96-415 (429)
183 1z57_A Dual specificity protei 100.0 3.9E-37 1.3E-41 348.9 24.8 285 805-1133 13-334 (339)
184 3pg1_A Mitogen-activated prote 100.0 4.2E-37 1.4E-41 354.4 25.4 295 805-1134 21-323 (362)
185 2yfx_A Tyrosine-protein kinase 100.0 4.1E-37 1.4E-41 349.8 24.5 271 799-1133 23-303 (327)
186 2zmd_A Dual specificity protei 100.0 4E-37 1.4E-41 360.1 24.9 260 806-1134 56-327 (390)
187 2wei_A Calmodulin-domain prote 100.0 3.1E-37 1.1E-41 344.0 22.6 260 806-1134 22-283 (287)
188 2wqm_A Serine/threonine-protei 100.0 6.8E-37 2.3E-41 344.8 25.4 267 801-1134 27-297 (310)
189 2vwi_A Serine/threonine-protei 100.0 6.8E-38 2.3E-42 350.4 16.9 278 803-1134 12-294 (303)
190 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 4.1E-37 1.4E-41 366.8 24.8 255 805-1133 183-439 (452)
191 2pvf_A Fibroblast growth facto 100.0 8.5E-37 2.9E-41 348.5 26.3 261 805-1132 34-316 (334)
192 2qkw_B Protein kinase; three-h 100.0 9.8E-38 3.3E-42 354.0 18.1 273 804-1133 37-314 (321)
193 3mdy_A Bone morphogenetic prot 100.0 1.5E-36 5.1E-41 345.0 27.7 267 806-1134 37-331 (337)
194 1qpc_A LCK kinase; alpha beta 100.0 3.9E-37 1.3E-41 341.1 22.3 253 805-1131 12-266 (279)
195 2i1m_A Macrophage colony-stimu 100.0 6.9E-37 2.4E-41 348.2 24.8 262 804-1132 44-324 (333)
196 3byv_A Rhoptry kinase; malaria 100.0 1.6E-38 5.6E-43 369.4 11.6 270 805-1133 72-365 (377)
197 3c1x_A Hepatocyte growth facto 100.0 3.7E-37 1.3E-41 358.4 22.8 262 806-1133 89-354 (373)
198 2clq_A Mitogen-activated prote 100.0 4.7E-37 1.6E-41 342.5 22.4 263 804-1136 20-287 (295)
199 3lxl_A Tyrosine-protein kinase 100.0 6E-37 2E-41 348.4 23.6 274 804-1132 21-301 (327)
200 1blx_A Cyclin-dependent kinase 100.0 7.7E-37 2.6E-41 346.1 24.2 287 805-1134 10-303 (326)
201 4e5w_A Tyrosine-protein kinase 100.0 8.7E-37 3E-41 341.9 24.3 273 806-1131 21-299 (302)
202 3uim_A Brassinosteroid insensi 100.0 3.8E-37 1.3E-41 349.3 21.7 274 804-1133 28-310 (326)
203 2xir_A Vascular endothelial gr 100.0 7.2E-37 2.5E-41 344.5 23.1 262 805-1132 26-308 (316)
204 2a19_B Interferon-induced, dou 100.0 9.5E-37 3.2E-41 337.8 23.5 261 806-1135 11-275 (284)
205 3pls_A Macrophage-stimulating 100.0 2.8E-36 9.4E-41 336.9 27.1 258 807-1132 22-285 (298)
206 3rgf_A Cyclin-dependent kinase 100.0 7.4E-37 2.5E-41 358.9 23.6 290 808-1134 22-340 (405)
207 3coi_A Mitogen-activated prote 100.0 6.9E-37 2.4E-41 351.9 22.0 282 806-1133 24-311 (353)
208 3op5_A Serine/threonine-protei 100.0 8.2E-37 2.8E-41 353.2 22.7 279 805-1131 34-326 (364)
209 1u46_A ACK-1, activated CDC42 100.0 9.6E-37 3.3E-41 339.4 22.3 264 804-1135 16-285 (291)
210 1wak_A Serine/threonine-protei 100.0 1.5E-36 5E-41 352.7 24.7 286 805-1132 36-396 (397)
211 2pml_X PFPK7, Ser/Thr protein 100.0 1.6E-37 5.5E-42 355.3 16.2 287 803-1134 28-329 (348)
212 3lxp_A Non-receptor tyrosine-p 100.0 1.5E-36 5.2E-41 344.2 24.0 270 808-1132 33-308 (318)
213 2y4i_B KSR2, HKSR2, kinase sup 100.0 2.4E-37 8.1E-42 349.3 17.2 269 802-1134 29-302 (319)
214 3g2f_A Bone morphogenetic prot 100.0 1.5E-36 5.3E-41 345.5 23.9 295 801-1133 8-317 (336)
215 1zy4_A Serine/threonine-protei 100.0 2.1E-36 7.3E-41 337.4 24.1 278 806-1134 6-290 (303)
216 2h34_A Serine/threonine-protei 100.0 1.7E-36 5.7E-41 342.5 23.1 263 802-1133 30-295 (309)
217 2h8h_A Proto-oncogene tyrosine 100.0 1.4E-36 4.6E-41 370.0 23.9 257 804-1134 265-523 (535)
218 2eu9_A Dual specificity protei 100.0 3.9E-36 1.3E-40 343.4 26.1 283 805-1133 18-339 (355)
219 1b6c_B TGF-B superfamily recep 100.0 3.7E-36 1.2E-40 342.9 25.0 266 806-1133 42-335 (342)
220 2ozo_A Tyrosine-protein kinase 100.0 5.5E-36 1.9E-40 370.3 27.6 254 806-1130 335-594 (613)
221 2vx3_A Dual specificity tyrosi 100.0 5E-36 1.7E-40 349.1 25.1 281 805-1134 53-379 (382)
222 4hgt_A Casein kinase I isoform 100.0 6.8E-36 2.3E-40 333.0 25.0 263 805-1132 8-278 (296)
223 3aln_A Dual specificity mitoge 100.0 1E-36 3.5E-41 346.3 18.5 268 803-1133 19-291 (327)
224 4fl3_A Tyrosine-protein kinase 100.0 4.4E-36 1.5E-40 372.4 25.6 249 812-1131 375-628 (635)
225 3uzp_A CKI-delta, CKID, casein 100.0 5.6E-36 1.9E-40 334.0 23.9 263 805-1132 8-278 (296)
226 3gxj_A TGF-beta receptor type- 100.0 3.4E-38 1.2E-42 352.8 5.6 267 806-1134 3-297 (303)
227 3cek_A Dual specificity protei 100.0 5.5E-36 1.9E-40 338.1 23.7 261 806-1135 28-300 (313)
228 1q8y_A SR protein kinase; tran 100.0 5.1E-36 1.8E-40 345.8 23.8 288 804-1134 17-340 (373)
229 2v62_A Serine/threonine-protei 100.0 2.4E-36 8.3E-41 346.7 20.3 280 805-1133 36-327 (345)
230 2dyl_A Dual specificity mitoge 100.0 4.7E-36 1.6E-40 338.1 22.1 263 803-1133 22-289 (318)
231 4eut_A Serine/threonine-protei 100.0 3.8E-36 1.3E-40 352.1 22.1 290 806-1133 9-308 (396)
232 3ll6_A Cyclin G-associated kin 100.0 5.4E-36 1.9E-40 339.7 22.5 273 806-1133 28-307 (337)
233 2jii_A Serine/threonine-protei 100.0 5.3E-36 1.8E-40 344.7 21.9 278 805-1132 41-334 (352)
234 2buj_A Serine/threonine-protei 100.0 1E-35 3.4E-40 336.0 22.5 278 804-1136 27-308 (317)
235 3fhr_A MAP kinase-activated pr 100.0 2.4E-36 8.1E-41 345.9 17.6 264 805-1134 27-294 (336)
236 2iwi_A Serine/threonine-protei 100.0 4.7E-36 1.6E-40 338.2 19.7 253 805-1134 30-290 (312)
237 2w1i_A JAK2; chromosomal rearr 100.0 1.7E-35 5.7E-40 336.6 24.2 274 805-1132 40-320 (326)
238 3a99_A Proto-oncogene serine/t 100.0 3.3E-36 1.1E-40 342.0 17.9 253 805-1134 42-300 (320)
239 2j0j_A Focal adhesion kinase 1 100.0 3.3E-35 1.1E-39 365.9 27.9 257 805-1132 389-649 (656)
240 3q60_A ROP5B; pseudokinase, tr 100.0 5.5E-36 1.9E-40 347.2 19.0 278 805-1133 61-358 (371)
241 3e7e_A HBUB1, BUB1A, mitotic c 100.0 1.3E-35 4.5E-40 343.1 20.2 256 805-1129 64-334 (365)
242 3p23_A Serine/threonine-protei 100.0 1.3E-35 4.5E-40 352.1 18.3 262 807-1133 25-289 (432)
243 3sv0_A Casein kinase I-like; t 100.0 2.2E-34 7.4E-39 346.0 26.6 261 805-1131 6-275 (483)
244 2rio_A Serine/threonine-protei 100.0 5.1E-35 1.7E-39 347.0 20.8 270 808-1132 17-300 (434)
245 3m2w_A MAP kinase-activated pr 100.0 3.5E-34 1.2E-38 321.7 19.2 245 805-1136 16-265 (299)
246 2vuw_A Serine/threonine-protei 100.0 3.1E-35 1E-39 335.9 7.6 274 805-1132 19-336 (336)
247 3dzo_A Rhoptry kinase domain; 100.0 2.5E-34 8.5E-39 338.9 13.5 269 805-1132 77-368 (413)
248 3qa8_A MGC80376 protein; kinas 100.0 1.6E-34 5.3E-39 356.3 12.1 290 801-1132 9-302 (676)
249 3uqc_A Probable conserved tran 100.0 6.5E-33 2.2E-37 310.7 19.6 230 806-1134 31-265 (286)
250 2pzi_A Probable serine/threoni 100.0 1.2E-32 4.1E-37 344.6 19.8 242 806-1131 80-324 (681)
251 3rgz_A Protein brassinosteroid 100.0 8E-32 2.7E-36 341.6 23.1 296 18-326 369-743 (768)
252 3rgz_A Protein brassinosteroid 100.0 1.2E-30 3.9E-35 331.0 21.1 274 17-298 394-743 (768)
253 2z66_A Variable lymphocyte rec 100.0 4.6E-30 1.6E-34 288.9 19.2 272 21-301 11-292 (306)
254 1xku_A Decorin; proteoglycan, 100.0 7.5E-29 2.5E-33 282.3 28.4 267 16-293 51-329 (330)
255 3v47_A TOLL-like receptor 5B a 100.0 5.7E-29 1.9E-33 294.9 26.2 280 16-300 29-412 (455)
256 2ft3_A Biglycan; proteoglycan, 100.0 8.5E-29 2.9E-33 282.3 24.2 264 17-292 54-329 (332)
257 3zyj_A Leucine-rich repeat-con 100.0 2.4E-28 8.2E-33 289.6 28.5 256 19-284 45-306 (440)
258 1ogq_A PGIP-2, polygalacturona 100.0 6.6E-30 2.2E-34 289.9 12.3 248 41-298 50-307 (313)
259 4g8a_A TOLL-like receptor 4; l 100.0 2.5E-28 8.6E-33 299.7 26.5 133 14-149 49-185 (635)
260 1ogq_A PGIP-2, polygalacturona 100.0 3.7E-29 1.3E-33 283.7 17.0 247 17-271 50-305 (313)
261 3zyi_A Leucine-rich repeat-con 100.0 3.8E-28 1.3E-32 289.0 25.7 255 19-283 56-316 (452)
262 2id5_A Lingo-1, leucine rich r 100.0 3E-28 1E-32 291.2 22.9 276 15-298 30-311 (477)
263 2id5_A Lingo-1, leucine rich r 100.0 6.7E-28 2.3E-32 288.1 23.5 272 17-297 56-334 (477)
264 3o6n_A APL1; leucine-rich repe 100.0 1.9E-27 6.3E-32 277.1 25.9 267 18-298 70-354 (390)
265 4eco_A Uncharacterized protein 100.0 1.4E-28 4.7E-33 305.6 17.1 272 16-295 248-578 (636)
266 4fcg_A Uncharacterized protein 100.0 6.3E-28 2.2E-32 275.6 21.2 224 40-271 80-315 (328)
267 4ecn_A Leucine-rich repeat pro 100.0 2.3E-28 7.9E-33 311.5 19.3 271 17-295 491-818 (876)
268 4eco_A Uncharacterized protein 100.0 1.6E-28 5.5E-33 305.0 15.1 270 17-297 206-527 (636)
269 4ecn_A Leucine-rich repeat pro 100.0 8.1E-28 2.8E-32 306.4 21.5 270 17-297 448-767 (876)
270 3t6q_A CD180 antigen; protein- 100.0 3E-27 1E-31 290.6 25.3 276 15-298 31-365 (606)
271 3oja_B Anopheles plasmodium-re 100.0 2.1E-27 7.2E-32 292.6 23.8 267 18-298 76-360 (597)
272 3o6n_A APL1; leucine-rich repe 100.0 1.3E-27 4.4E-32 278.4 20.4 272 17-298 45-333 (390)
273 4fcg_A Uncharacterized protein 100.0 1.1E-27 3.8E-32 273.5 19.3 223 68-295 81-313 (328)
274 2z7x_B TOLL-like receptor 1, v 100.0 1.4E-27 4.7E-32 288.3 21.0 268 17-296 21-457 (520)
275 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3.2E-27 1.1E-31 288.5 24.3 270 16-297 51-487 (562)
276 2z7x_B TOLL-like receptor 1, v 99.9 2.6E-27 9E-32 285.9 22.4 82 17-104 45-128 (520)
277 1ozn_A Reticulon 4 receptor; N 99.9 5.4E-27 1.9E-31 261.3 22.8 247 43-301 13-266 (285)
278 1xku_A Decorin; proteoglycan, 99.9 1.4E-26 4.8E-31 263.5 26.6 242 18-271 32-277 (330)
279 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 5.6E-27 1.9E-31 286.4 24.5 82 17-104 76-159 (562)
280 3vq2_A TLR4, TOLL-like recepto 99.9 4.3E-27 1.5E-31 289.2 23.1 279 17-299 32-489 (606)
281 2z80_A TOLL-like receptor 2, v 99.9 3.7E-28 1.3E-32 279.4 12.7 244 22-274 36-318 (353)
282 2ft3_A Biglycan; proteoglycan, 99.9 8.7E-27 3E-31 265.6 22.9 241 18-271 34-278 (332)
283 2z81_A CD282 antigen, TOLL-lik 99.9 3.7E-27 1.3E-31 286.1 20.6 136 161-300 331-490 (549)
284 3t6q_A CD180 antigen; protein- 99.9 1.3E-26 4.5E-31 284.9 24.7 278 17-297 57-390 (606)
285 3vq2_A TLR4, TOLL-like recepto 99.9 7.6E-27 2.6E-31 287.0 21.7 265 17-297 285-559 (606)
286 4fmz_A Internalin; leucine ric 99.9 5.8E-26 2E-30 259.6 27.0 263 17-300 66-328 (347)
287 3v47_A TOLL-like receptor 5B a 99.9 2.8E-26 9.7E-31 271.7 23.7 268 21-300 14-388 (455)
288 1ziw_A TOLL-like receptor 3; i 99.9 4.6E-26 1.6E-30 284.0 26.6 278 17-298 329-624 (680)
289 3j0a_A TOLL-like receptor 5; m 99.9 8.6E-27 2.9E-31 298.5 20.3 259 17-284 266-574 (844)
290 3oja_B Anopheles plasmodium-re 99.9 1.6E-26 5.5E-31 284.8 21.7 271 18-298 52-339 (597)
291 4fmz_A Internalin; leucine ric 99.9 1.4E-25 4.7E-30 256.5 27.6 261 17-300 44-304 (347)
292 2z63_A TOLL-like receptor 4, v 99.9 3.1E-26 1.1E-30 278.8 22.7 142 157-300 366-511 (570)
293 2z63_A TOLL-like receptor 4, v 99.9 2.5E-26 8.4E-31 279.7 21.0 132 16-150 27-162 (570)
294 4azs_A Methyltransferase WBDD; 99.9 6.6E-28 2.3E-32 295.3 6.7 194 809-1046 237-435 (569)
295 3bz5_A Internalin-J, INLJ; leu 99.9 1.2E-25 4.1E-30 268.4 26.1 254 17-300 42-303 (457)
296 1ziw_A TOLL-like receptor 3; i 99.9 6E-26 2.1E-30 283.0 23.1 259 17-281 353-634 (680)
297 2z81_A CD282 antigen, TOLL-lik 99.9 9.5E-27 3.3E-31 282.5 14.8 178 16-199 25-208 (549)
298 2z66_A Variable lymphocyte rec 99.9 8.4E-26 2.9E-30 254.1 20.3 246 43-298 9-263 (306)
299 1o6v_A Internalin A; bacterial 99.9 3.4E-25 1.2E-29 264.5 26.6 259 17-298 68-346 (466)
300 1o6v_A Internalin A; bacterial 99.9 4.1E-25 1.4E-29 263.8 26.5 260 18-300 47-326 (466)
301 3bz5_A Internalin-J, INLJ; leu 99.9 1.5E-24 5.2E-29 258.9 29.3 184 17-225 64-248 (457)
302 1wwl_A Monocyte differentiatio 99.9 5.8E-27 2E-31 265.3 7.6 245 18-271 44-310 (312)
303 3o53_A Protein LRIM1, AGAP0063 99.9 1.7E-26 5.8E-31 262.0 11.4 248 19-282 12-261 (317)
304 2z80_A TOLL-like receptor 2, v 99.9 8.7E-26 3E-30 259.6 16.2 250 38-300 28-318 (353)
305 2z62_A TOLL-like receptor 4, v 99.9 5.2E-25 1.8E-29 244.2 21.4 212 69-283 29-250 (276)
306 3j0a_A TOLL-like receptor 5; m 99.9 3.1E-25 1E-29 284.1 21.6 273 15-295 22-350 (844)
307 3oja_A Leucine-rich immune mol 99.9 3.1E-26 1E-30 275.7 11.1 229 37-281 30-260 (487)
308 3zyj_A Leucine-rich repeat-con 99.9 1.1E-24 3.9E-29 258.1 24.2 243 42-297 44-293 (440)
309 3o53_A Protein LRIM1, AGAP0063 99.9 9.8E-27 3.3E-31 264.0 6.2 241 16-271 33-277 (317)
310 3oja_A Leucine-rich immune mol 99.9 4.4E-26 1.5E-30 274.3 11.4 236 15-265 32-270 (487)
311 1ozn_A Reticulon 4 receptor; N 99.9 2.9E-25 1E-29 247.4 17.0 249 20-280 14-269 (285)
312 4g8a_A TOLL-like receptor 4; l 99.9 1.9E-24 6.6E-29 265.2 25.8 292 23-327 37-584 (635)
313 1wwl_A Monocyte differentiatio 99.9 8.7E-26 3E-30 255.6 12.4 226 19-248 65-311 (312)
314 3zyi_A Leucine-rich repeat-con 99.9 1.4E-24 4.8E-29 258.2 23.3 225 15-247 73-304 (452)
315 3g06_A SSPH2 (leucine-rich rep 99.9 3.1E-24 1.1E-28 264.9 26.4 240 18-300 62-301 (622)
316 1jl5_A Outer protein YOPM; leu 99.9 7E-24 2.4E-28 252.9 27.0 123 41-180 131-253 (454)
317 1p9a_G Platelet glycoprotein I 99.9 2.5E-24 8.7E-29 241.6 21.1 207 68-282 10-220 (290)
318 2o6q_A Variable lymphocyte rec 99.9 9.3E-24 3.2E-28 233.8 24.8 201 42-274 17-222 (270)
319 3g06_A SSPH2 (leucine-rich rep 99.9 1E-23 3.5E-28 260.3 26.0 230 15-283 79-308 (622)
320 1jl5_A Outer protein YOPM; leu 99.9 6.1E-23 2.1E-27 244.9 26.9 203 16-248 90-292 (454)
321 2z62_A TOLL-like receptor 4, v 99.9 3.3E-23 1.1E-27 229.7 20.3 221 22-250 12-241 (276)
322 1p9a_G Platelet glycoprotein I 99.9 4.8E-23 1.6E-27 231.2 21.2 202 36-247 5-209 (290)
323 1h6u_A Internalin H; cell adhe 99.9 2.2E-23 7.6E-28 235.8 17.9 191 68-271 41-231 (308)
324 4glp_A Monocyte differentiatio 99.9 2.1E-23 7.2E-28 235.7 14.2 227 41-271 64-308 (310)
325 3en9_A Glycoprotease, O-sialog 99.9 4.4E-24 1.5E-28 260.0 8.6 201 809-1050 339-539 (540)
326 2o6q_A Variable lymphocyte rec 99.9 7E-22 2.4E-26 218.7 23.4 199 18-248 17-220 (270)
327 1h6u_A Internalin H; cell adhe 99.9 1.3E-22 4.3E-27 229.6 17.3 209 24-250 26-234 (308)
328 3m19_A Variable lymphocyte rec 99.9 1.3E-21 4.3E-26 214.3 22.0 185 69-281 15-204 (251)
329 4glp_A Monocyte differentiatio 99.9 1.7E-22 5.7E-27 228.3 15.1 203 40-247 90-308 (310)
330 2xwt_C Thyrotropin receptor; s 99.9 4E-22 1.4E-26 216.4 17.3 192 42-267 32-236 (239)
331 3rfs_A Internalin B, repeat mo 99.9 2E-22 6.9E-27 223.5 13.8 192 68-271 41-236 (272)
332 2xwt_C Thyrotropin receptor; s 99.9 7.8E-22 2.7E-26 214.1 17.5 180 69-278 32-223 (239)
333 2ca6_A RAN GTPase-activating p 99.9 1E-23 3.5E-28 245.3 2.5 237 35-271 26-317 (386)
334 3cvr_A Invasion plasmid antige 99.9 8.2E-22 2.8E-26 240.8 17.4 188 42-283 60-254 (571)
335 3rfs_A Internalin B, repeat mo 99.9 1.5E-21 5E-26 216.6 16.4 200 68-273 19-221 (272)
336 3cvr_A Invasion plasmid antige 99.9 3.3E-21 1.1E-25 235.5 19.7 182 92-301 60-248 (571)
337 1z7x_W Ribonuclease inhibitor; 99.8 5.6E-23 1.9E-27 243.6 -1.6 252 17-271 56-355 (461)
338 2ca6_A RAN GTPase-activating p 99.8 2.9E-22 9.9E-27 233.1 4.1 234 17-250 32-320 (386)
339 3goz_A Leucine-rich repeat-con 99.8 7E-22 2.4E-26 228.2 7.1 247 22-271 3-298 (362)
340 4ay9_X Follicle-stimulating ho 99.8 1.8E-20 6.1E-25 215.5 18.4 233 22-267 14-256 (350)
341 3m19_A Variable lymphocyte rec 99.8 8.4E-20 2.9E-24 199.8 19.7 176 42-249 15-195 (251)
342 1h6t_A Internalin B; cell adhe 99.8 1.5E-20 5.1E-25 210.9 13.3 170 68-248 46-215 (291)
343 1z7x_W Ribonuclease inhibitor; 99.8 2.1E-22 7.2E-27 238.7 -2.1 279 18-296 29-354 (461)
344 2ast_B S-phase kinase-associat 99.8 1.4E-21 4.9E-26 222.0 4.2 195 69-267 71-282 (336)
345 3goz_A Leucine-rich repeat-con 99.8 1.5E-21 5E-26 225.5 3.8 251 45-298 2-299 (362)
346 2xot_A Amphoterin-induced prot 99.8 2E-20 6.7E-25 216.2 12.1 183 71-281 21-213 (361)
347 4ay9_X Follicle-stimulating ho 99.8 9.7E-20 3.3E-24 209.4 17.5 221 15-244 28-257 (350)
348 1h6t_A Internalin B; cell adhe 99.8 1.7E-19 5.7E-24 202.4 16.9 191 68-271 24-214 (291)
349 1m9s_A Internalin B; cell inva 99.8 5.7E-20 1.9E-24 226.5 13.9 192 43-250 23-214 (605)
350 2ast_B S-phase kinase-associat 99.8 2.2E-20 7.7E-25 212.1 9.4 242 17-271 47-307 (336)
351 2v70_A SLIT-2, SLIT homolog 2 99.8 4.5E-19 1.5E-23 190.8 16.1 124 160-283 53-179 (220)
352 1zar_A RIO2 kinase; serine kin 99.8 8.4E-20 2.9E-24 204.2 10.6 152 807-1019 91-253 (282)
353 1m9s_A Internalin B; cell inva 99.8 4.8E-19 1.7E-23 218.2 16.8 188 23-227 27-214 (605)
354 1dce_A Protein (RAB geranylger 99.8 2.5E-21 8.6E-26 237.0 -7.5 195 56-271 337-547 (567)
355 2v9t_B SLIT homolog 2 protein 99.8 2.8E-18 9.5E-23 184.5 17.2 162 94-283 14-178 (220)
356 1xeu_A Internalin C; cellular 99.8 2.4E-19 8.3E-24 198.2 9.1 82 164-248 106-187 (263)
357 1xeu_A Internalin C; cellular 99.8 5.9E-19 2E-23 195.1 11.1 168 68-271 19-186 (263)
358 2o6s_A Variable lymphocyte rec 99.8 2.2E-18 7.6E-23 182.8 14.4 165 72-271 11-179 (208)
359 3e6j_A Variable lymphocyte rec 99.8 4.7E-18 1.6E-22 183.8 17.2 154 93-274 21-176 (229)
360 2o6s_A Variable lymphocyte rec 99.8 4.3E-18 1.5E-22 180.6 15.7 176 44-257 10-189 (208)
361 3e6j_A Variable lymphocyte rec 99.7 1.7E-17 5.9E-22 179.3 17.6 153 70-250 21-176 (229)
362 4b8c_D Glucose-repressible alc 99.7 5.3E-19 1.8E-23 222.6 5.4 218 41-269 173-403 (727)
363 4ezg_A Putative uncharacterize 99.7 6.8E-18 2.3E-22 177.9 12.9 108 160-270 84-194 (197)
364 1dce_A Protein (RAB geranylger 99.7 5.1E-20 1.8E-24 225.4 -6.3 203 37-264 345-567 (567)
365 4ezg_A Putative uncharacterize 99.7 1.7E-17 6E-22 174.8 13.9 150 68-247 44-195 (197)
366 2xot_A Amphoterin-induced prot 99.7 1.4E-17 4.7E-22 192.4 14.1 173 43-247 20-203 (361)
367 1zth_A RIO1 serine protein kin 99.7 2.2E-17 7.7E-22 181.9 11.9 142 808-984 49-218 (258)
368 4b8c_D Glucose-repressible alc 99.7 2.8E-18 9.6E-23 216.0 3.9 152 68-223 173-329 (727)
369 2v9t_B SLIT homolog 2 protein 99.7 1.8E-16 6.2E-21 170.4 16.1 149 71-247 14-166 (220)
370 2v70_A SLIT-2, SLIT homolog 2 99.7 2.5E-16 8.6E-21 169.2 16.0 148 44-223 14-166 (220)
371 1w8a_A SLIT protein; signaling 99.7 2.9E-16 9.8E-21 165.1 14.0 137 140-282 11-151 (192)
372 2wfh_A SLIT homolog 2 protein 99.7 7.1E-16 2.4E-20 162.5 15.2 139 140-284 13-153 (193)
373 3sb4_A Hypothetical leucine ri 99.6 6.5E-16 2.2E-20 175.8 12.9 100 163-264 225-328 (329)
374 3ogk_B Coronatine-insensitive 99.6 2.3E-17 7.9E-22 201.7 0.8 277 17-295 192-525 (592)
375 3ogk_B Coronatine-insensitive 99.6 7E-18 2.4E-22 206.3 -4.5 245 18-265 165-444 (592)
376 2ell_A Acidic leucine-rich nuc 99.6 1.6E-15 5.5E-20 155.2 11.5 134 68-228 24-165 (168)
377 2ell_A Acidic leucine-rich nuc 99.6 2.2E-15 7.6E-20 154.1 12.0 136 40-204 23-164 (168)
378 4fdw_A Leucine rich hypothetic 99.6 5.1E-14 1.8E-18 165.1 20.2 228 27-271 122-359 (401)
379 4gyi_A RIO2 kinase; protein ki 99.6 3.6E-15 1.2E-19 172.8 10.2 150 808-984 97-264 (397)
380 4fdw_A Leucine rich hypothetic 99.6 6.1E-14 2.1E-18 164.5 19.7 237 18-270 136-383 (401)
381 1w8a_A SLIT protein; signaling 99.5 6.2E-15 2.1E-19 154.9 8.9 87 163-249 53-142 (192)
382 2o6r_A Variable lymphocyte rec 99.5 2.4E-14 8.3E-19 147.8 12.5 129 139-273 9-140 (177)
383 2je0_A Acidic leucine-rich nuc 99.5 6.7E-15 2.3E-19 147.4 8.0 127 137-266 17-149 (149)
384 3g39_A Variable lymphocyte rec 99.5 4.6E-14 1.6E-18 145.4 12.8 107 166-274 11-119 (170)
385 2wfh_A SLIT homolog 2 protein 99.5 7.5E-14 2.6E-18 147.0 14.4 125 71-200 13-139 (193)
386 2p1m_B Transport inhibitor res 99.5 4.5E-16 1.5E-20 190.2 -3.5 180 111-295 286-493 (594)
387 1a9n_A U2A', U2A'; complex (nu 99.5 1.4E-14 4.9E-19 149.6 8.3 103 166-269 44-152 (176)
388 1a9n_A U2A', U2A'; complex (nu 99.5 2.2E-14 7.4E-19 148.3 8.9 134 109-247 14-154 (176)
389 2je0_A Acidic leucine-rich nuc 99.5 3.7E-14 1.3E-18 142.0 9.9 56 68-124 17-74 (149)
390 2o6r_A Variable lymphocyte rec 99.5 1.7E-13 5.9E-18 141.4 14.8 91 160-250 48-141 (177)
391 2r9u_A Variable lymphocyte rec 99.5 9.2E-14 3.1E-18 143.9 12.6 107 166-274 14-122 (174)
392 1ds9_A Outer arm dynein; leuci 99.5 2.4E-16 8.3E-21 166.1 -9.4 109 86-200 43-153 (198)
393 1ds9_A Outer arm dynein; leuci 99.5 2.1E-16 7.1E-21 166.7 -10.2 110 159-271 65-186 (198)
394 2p1m_B Transport inhibitor res 99.5 1.1E-15 3.7E-20 186.8 -6.1 131 38-174 102-245 (594)
395 3sb4_A Hypothetical leucine ri 99.4 2.8E-13 9.6E-18 154.1 10.0 99 136-240 225-328 (329)
396 2ifg_A High affinity nerve gro 99.4 8.7E-13 3E-17 150.7 12.1 130 168-300 12-145 (347)
397 2r9u_A Variable lymphocyte rec 99.3 1.1E-11 3.8E-16 128.2 10.9 101 44-150 15-118 (174)
398 3g39_A Variable lymphocyte rec 99.3 1.5E-11 5.2E-16 126.5 11.4 104 43-152 11-117 (170)
399 3un9_A NLR family member X1; l 99.2 1.1E-12 3.8E-17 152.3 -2.0 164 92-255 73-261 (372)
400 3un9_A NLR family member X1; l 99.1 3.1E-12 1.1E-16 148.5 -1.1 157 68-224 72-253 (372)
401 4fs7_A Uncharacterized protein 99.1 1.2E-09 4.2E-14 127.2 17.4 244 12-265 67-374 (394)
402 2ifg_A High affinity nerve gro 99.1 1.9E-10 6.3E-15 131.3 9.1 104 190-297 11-117 (347)
403 3tm0_A Aminoglycoside 3'-phosp 99.1 3.9E-10 1.3E-14 123.3 11.0 140 805-983 13-212 (263)
404 4gt6_A Cell surface protein; l 99.0 1E-08 3.4E-13 119.5 21.1 247 11-268 58-368 (394)
405 4fs7_A Uncharacterized protein 98.9 1.1E-08 3.9E-13 119.0 15.3 137 28-173 58-217 (394)
406 4h09_A Hypothetical leucine ri 98.9 4.4E-08 1.5E-12 113.1 19.5 239 18-267 47-320 (379)
407 2ra8_A Uncharacterized protein 98.8 1.4E-09 4.7E-14 125.7 5.1 153 108-268 166-341 (362)
408 4gt6_A Cell surface protein; l 98.8 1.7E-07 5.7E-12 109.1 21.3 232 28-267 50-344 (394)
409 1nd4_A Aminoglycoside 3'-phosp 98.8 8.9E-09 3E-13 111.5 7.8 134 805-983 19-213 (264)
410 3dxp_A Putative acyl-COA dehyd 98.7 1.3E-08 4.5E-13 116.8 9.5 148 809-984 41-248 (359)
411 3sg8_A APH(2'')-ID; antibiotic 98.6 2.2E-08 7.4E-13 112.3 6.1 197 812-1050 26-288 (304)
412 2ra8_A Uncharacterized protein 98.6 2.3E-08 7.8E-13 115.5 6.4 81 162-244 250-341 (362)
413 4h09_A Hypothetical leucine ri 98.5 3.1E-06 1.1E-10 97.5 19.1 241 10-267 63-343 (379)
414 1io0_A Tropomodulin; LRR prote 98.3 1.1E-07 3.9E-12 99.0 1.8 115 156-270 28-164 (185)
415 3r70_A Aminoglycoside phosphot 98.3 3E-06 1E-10 95.7 13.5 131 809-984 40-237 (320)
416 3rw6_A Nuclear RNA export fact 98.3 9.2E-08 3.2E-12 105.6 0.9 78 185-263 168-257 (267)
417 1io0_A Tropomodulin; LRR prote 98.2 4.6E-07 1.6E-11 94.3 3.1 89 158-246 59-164 (185)
418 3rw6_A Nuclear RNA export fact 98.2 2.7E-07 9.1E-12 101.9 0.7 97 142-239 148-257 (267)
419 3rfe_A Platelet glycoprotein I 98.2 2.8E-06 9.7E-11 83.5 7.6 72 213-286 11-84 (130)
420 3tdw_A Gentamicin resistance p 98.0 3.4E-05 1.2E-09 86.6 14.1 138 811-984 24-224 (306)
421 4gkh_A Aminoglycoside 3'-phosp 97.9 7.9E-05 2.7E-09 81.3 13.8 134 808-983 27-222 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 97.7 0.00012 4.1E-09 84.3 10.8 76 809-910 44-121 (362)
423 3ats_A Putative uncharacterize 97.5 0.00016 5.6E-09 82.3 9.0 86 809-910 23-120 (357)
424 3d1u_A Putative fructosamine-3 97.5 0.0005 1.7E-08 76.5 12.3 76 809-910 18-97 (288)
425 2q83_A YTAA protein; 2635576, 97.4 0.0016 5.6E-08 72.9 15.5 30 947-983 222-251 (346)
426 2olc_A MTR kinase, methylthior 97.2 0.00083 2.8E-08 77.8 10.0 82 810-908 34-120 (397)
427 3rfe_A Platelet glycoprotein I 96.9 0.0011 3.8E-08 64.8 6.4 55 45-104 12-68 (130)
428 1pgv_A TMD-1, tropomodulin TMD 96.7 0.001 3.6E-08 69.8 4.8 87 37-123 37-135 (197)
429 3e4g_A ATP synthase subunit S, 96.7 0.0019 6.4E-08 66.6 6.3 82 41-125 61-150 (176)
430 3dxq_A Choline/ethanolamine ki 96.7 0.0074 2.5E-07 67.0 11.6 71 811-910 23-95 (301)
431 1pgv_A TMD-1, tropomodulin TMD 96.7 0.0015 5.3E-08 68.5 5.6 110 159-268 36-168 (197)
432 2pyw_A Uncharacterized protein 96.6 0.0068 2.3E-07 70.8 11.3 32 945-984 230-261 (420)
433 2ppq_A HSK, HK, homoserine kin 96.2 0.017 5.8E-07 64.4 10.8 150 809-983 25-216 (322)
434 3jr1_A Putative fructosamine-3 96.1 0.045 1.5E-06 61.5 13.9 76 810-910 40-118 (312)
435 3e4g_A ATP synthase subunit S, 95.9 0.0024 8.2E-08 65.8 1.7 33 165-197 62-95 (176)
436 3csv_A Aminoglycoside phosphot 95.8 0.02 7E-07 64.3 9.5 35 947-984 183-217 (333)
437 2qg7_A Ethanolamine kinase PV0 95.7 0.057 1.9E-06 64.0 12.9 73 810-909 112-187 (458)
438 3c5i_A Choline kinase; choline 95.3 0.018 6.3E-07 65.7 6.7 29 948-984 213-241 (369)
439 3feg_A Choline/ethanolamine ki 94.9 0.037 1.3E-06 63.9 7.6 143 812-984 56-254 (379)
440 3f7w_A Putative fructosamine-3 94.9 0.23 7.8E-06 54.4 13.7 75 809-909 18-96 (288)
441 2yle_A Protein spire homolog 1 94.3 0.28 9.6E-06 52.0 12.0 99 908-1045 33-132 (229)
442 1nw1_A Choline kinase (49.2 KD 94.2 0.23 7.9E-06 58.1 12.5 71 810-908 77-157 (429)
443 1zyl_A Hypothetical protein YI 93.5 0.23 8E-06 55.2 10.2 29 947-984 195-223 (328)
444 3mes_A Choline kinase; malaria 93.3 0.34 1.2E-05 56.6 11.6 73 810-909 74-156 (424)
445 3i1a_A Spectinomycin phosphotr 92.8 0.35 1.2E-05 54.6 10.5 31 947-984 206-236 (339)
446 3f2s_A CK, chetk-alpha, cholin 88.1 2.5 8.5E-05 49.0 12.0 35 948-983 245-279 (401)
447 3g15_A CK, chetk-alpha, cholin 84.8 1.8 6E-05 50.0 8.4 35 949-984 246-280 (401)
448 3isr_A Transglutaminase-like e 83.0 0.4 1.4E-05 53.3 1.8 43 704-748 177-223 (293)
449 2f4m_A Peptide N-glycanase; gl 80.3 0.64 2.2E-05 51.3 2.2 41 704-749 139-179 (295)
450 3cxl_A N-chimerin; SH2, RHO-GA 63.3 0.75 2.6E-05 54.4 -2.6 65 809-880 145-215 (463)
451 1x3z_A Peptide: N-glycanase; h 52.2 5 0.00017 44.9 1.7 45 704-753 180-224 (335)
452 1vjj_A Protein-glutamine gluta 50.4 3.4 0.00012 50.5 0.1 31 703-735 267-297 (692)
453 1g0d_A Protein-glutamine gamma 47.0 4.8 0.00017 49.2 0.7 32 703-736 267-298 (695)
454 2q3z_A Transglutaminase 2; tra 46.8 5 0.00017 49.2 0.7 31 703-735 272-302 (687)
455 1ex0_A Coagulation factor XIII 42.8 6.2 0.00021 48.6 0.7 33 702-736 308-340 (731)
456 4ann_A ESSB; membrane protein, 34.6 35 0.0012 35.8 4.8 50 924-982 77-126 (215)
457 4ano_A ESSB; membrane protein, 29.7 84 0.0029 33.0 6.7 50 924-982 81-131 (219)
458 2ks1_B Epidermal growth factor 25.2 6.9 0.00024 30.6 -1.9 28 330-357 11-40 (44)
459 1cja_A Protein (actin-fragmin 24.9 2.1E+02 0.0072 32.0 9.1 158 799-983 59-236 (342)
460 2lz0_A Uncharacterized protein 24.4 82 0.0028 28.7 4.9 50 25-78 4-53 (100)
461 2lz0_A Uncharacterized protein 20.1 93 0.0032 28.3 4.3 37 110-146 16-52 (100)
No 1
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.3e-50 Score=465.44 Aligned_cols=261 Identities=25% Similarity=0.332 Sum_probs=214.8
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+.++++|++.++||+|+||+||+|++. +..||+|+.... .......+. +.+|+.+|++++|||||++++++.
T Consensus 20 f~sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~--~~~~~~~~~----~~~E~~il~~l~HpnIV~~~~~~~ 93 (350)
T 4b9d_A 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINIS--RMSSKEREE----SRREVAVLANMKHPNIVQYRESFE 93 (350)
T ss_dssp CSCCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECT--TSCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CCcccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehH--HCCHHHHHH----HHHHHHHHHHCCCCCCCcEEEEEE
Confidence 446789999999999999999999985 667888875433 333333334 489999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+++. .|||||||+||+|.++|.. .+...+++.+++.|+.||+.||+|||++|||||||||+||
T Consensus 94 ~~~~--------------~yiVmEy~~gg~L~~~i~~---~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NI 156 (350)
T 4b9d_A 94 ENGS--------------LYIVMDYCEGGDLFKRINA---QKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNI 156 (350)
T ss_dssp ETTE--------------EEEEEECCTTCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGE
T ss_pred ECCE--------------EEEEEeCCCCCcHHHHHHH---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHE
Confidence 7653 4999999999999999976 3345689999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||+|+.+...... ....+||+.|||||++.+ ..|+.++|||||||++
T Consensus 157 Ll~~~-------g~vKl~DFGla~~~~~~~~~----------~~~~~GT~~YmAPE~l~~----~~y~~~~DiwSlGvil 215 (350)
T 4b9d_A 157 FLTKD-------GTVQLGDFGIARVLNSTVEL----------ARACIGTPYYLSPEICEN----KPYNNKSDIWALGCVL 215 (350)
T ss_dssp EECTT-------CCEEECSTTEESCCCHHHHH----------HHHHHSCCTTCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred EECCC-------CCEEEcccccceeecCCccc----------ccccCCCccccCHHHHCC----CCCCcHHHHHHHHHHH
Confidence 99987 88999999999876432211 123579999999999986 5789999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|||++|+.||.+.+..++...+..+..+.++. ..++++.+||.+||+.||++|
T Consensus 216 yemltG~~PF~~~~~~~~~~~i~~~~~~~~~~---------------------------~~s~~~~~li~~~L~~dP~~R 268 (350)
T 4b9d_A 216 YELCTLKHAFEAGSMKNLVLKIISGSFPPVSL---------------------------HYSYDLRSLVSQLFKRNPRDR 268 (350)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHHccCChhHC
Confidence 99999999999988888888887666543321 456679999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
||++|+++|+|+..
T Consensus 269 ~s~~e~l~hp~~~~ 282 (350)
T 4b9d_A 269 PSVNSILEKGFIAK 282 (350)
T ss_dssp CCHHHHHTSHHHHT
T ss_pred cCHHHHhcCHHhhc
Confidence 99999999999864
No 2
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=5.2e-50 Score=459.84 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=216.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..|++.++||+|+||+||+|++. +..||+|+...... ...+. +.+|+.+|++++|||||+++++|.+.+.
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~----~~~~~----~~~Ei~il~~l~HpnIV~l~~~~~~~~~ 145 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRREL----LFNEVVIMRDYQHENVVEMYNSYLVGDE 145 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC----SSGGG----GHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch----hHHHH----HHHHHHHHHhCCCCCCCcEEEEEEECCE
Confidence 45999999999999999999985 66788887654321 11223 3799999999999999999999987664
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.|||||||+||+|.+++.+ ..+++.++..|+.||+.||+|||++|||||||||+|||++.
T Consensus 146 --------------~~ivmEy~~gg~L~~~l~~------~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~ 205 (346)
T 4fih_A 146 --------------LWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 205 (346)
T ss_dssp --------------EEEEECCCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECT
T ss_pred --------------EEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECC
Confidence 4999999999999999975 36999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+|+.+..... .....+||+.|||||++.+ ..|+.++|||||||++|||+
T Consensus 206 ~-------g~vKl~DFGla~~~~~~~~----------~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilyeml 264 (346)
T 4fih_A 206 D-------GRVKLSDFGFCAQVSKEVP----------RRKSLVGTPYWMAPELISR----LPYGPEVDIWSLGIMVIEMV 264 (346)
T ss_dssp T-------CCEEECCCTTCEECCSSSC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEecCcCceecCCCCC----------cccccccCcCcCCHHHHCC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 8899999999987643211 1235679999999999976 57899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|+.||.+.+..++...|.....+.+... ...++++.+||.+||+.||++|||++
T Consensus 265 ~G~~PF~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~s~~~~dli~~~L~~dP~~R~ta~ 319 (346)
T 4fih_A 265 DGEPPYFNEPPLKAMKMIRDNLPPRLKNL-------------------------HKVSPSLKGFLDRLLVRDPAQRATAA 319 (346)
T ss_dssp HSSCTTTTSCHHHHHHHHHHSSCCCCSCG-------------------------GGSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HCCCCCCCcCHHHHHHHHHcCCCCCCCcc-------------------------ccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 99999999888888888766544332210 14567899999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 001143 1124 DLYEMFVARTSS 1135 (1141)
Q Consensus 1124 ElL~~L~~~~~s 1135 (1141)
|+++|+|+....
T Consensus 320 e~l~Hp~~~~~~ 331 (346)
T 4fih_A 320 ELLKHPFLAKAG 331 (346)
T ss_dssp HHTTCGGGGGCC
T ss_pred HHhcCHhhcCCC
Confidence 999999998654
No 3
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=4e-49 Score=443.20 Aligned_cols=258 Identities=24% Similarity=0.340 Sum_probs=203.5
Q ss_pred ceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
|++.++||+|+||+||+|.+..+...|+++.+..........+. +.+|+.+|++++|||||++++++.+...
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~----~~~E~~il~~l~HpnIV~~~~~~~~~~~---- 99 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR----FKEEAEMLKGLQHPNIVRFYDSWESTVK---- 99 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHH----HHHHHHHHHTCCCTTBCCEEEEEEEEET----
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHH----HHHHHHHHHhCCCCCCCcEEEEEeeccC----
Confidence 37888999999999999999755444444444433333343344 4899999999999999999999875211
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCCeeeec-c
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENILIDL-E 964 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g--IvHrDLKP~NILld~-~ 964 (1141)
.....|||||||+||+|.+++++ ...+++..++.|+.||+.||+|||+++ ||||||||+|||++. +
T Consensus 100 ------~~~~~~lvmEy~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~ 168 (290)
T 3fpq_A 100 ------GKKCIVLVTELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT 168 (290)
T ss_dssp ------TEEEEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTT
T ss_pred ------CCcEEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCC
Confidence 12256999999999999999986 246999999999999999999999998 999999999999974 4
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||+|+..... .....+||+.|||||++.+ .|+.++|||||||++|||+|
T Consensus 169 -------g~vKl~DFGla~~~~~~------------~~~~~~GTp~YmAPE~~~~-----~y~~~~DiwSlGvilyellt 224 (290)
T 3fpq_A 169 -------GSVKIGDLGLATLKRAS------------FAKAVIGTPEFMAPEMYEE-----KYDESVDVYAFGMCMLEMAT 224 (290)
T ss_dssp -------SCEEECCTTGGGGCCTT------------SBEESCSSCCCCCGGGGGT-----CCCTHHHHHHHHHHHHHHHH
T ss_pred -------CCEEEEeCcCCEeCCCC------------ccCCcccCccccCHHHcCC-----CCCcHHHHHHHHHHHHHHHH
Confidence 78999999999753321 1124579999999999864 58999999999999999999
Q ss_pred CCCCCCCCC-HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 LQVPYMGLS-ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 Gk~Pf~~~~-~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|+.||.+.. ..++...+..+..+... ....++++.+||.+||+.||++|||++
T Consensus 225 g~~Pf~~~~~~~~~~~~i~~~~~~~~~--------------------------~~~~~~~~~~li~~~L~~dP~~R~s~~ 278 (290)
T 3fpq_A 225 SEYPYSECQNAAQIYRRVTSGVKPASF--------------------------DKVAIPEVKEIIEGCIRQNKDERYSIK 278 (290)
T ss_dssp SSCTTTTCSSHHHHHHHHTTTCCCGGG--------------------------GGCCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCCCCCCCCcHHHHHHHHHcCCCCCCC--------------------------CccCCHHHHHHHHHHccCChhHCcCHH
Confidence 999997644 44455555544332111 113456799999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001143 1124 DLYEMFVARTS 1134 (1141)
Q Consensus 1124 ElL~~L~~~~~ 1134 (1141)
|+++|+|++..
T Consensus 279 e~l~Hp~~~~~ 289 (290)
T 3fpq_A 279 DLLNHAFFQEE 289 (290)
T ss_dssp HHHTSGGGC--
T ss_pred HHhcCccccCC
Confidence 99999999754
No 4
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.8e-49 Score=448.97 Aligned_cols=260 Identities=21% Similarity=0.254 Sum_probs=215.7
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
..++|++.++||+|+||+||+|++. +..+|+|+...... .......++.+|+.+|++++|||||+++++|.++
T Consensus 30 ~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~-----~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~ 104 (311)
T 4aw0_A 30 RPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHI-----IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDD 104 (311)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred CccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHC-----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeC
Confidence 4568999999999999999999984 66788887643211 1112223458999999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+. .|||||||+||+|.+++++ .+.+++.+++.|+.||+.||+|||++||+||||||+|||+
T Consensus 105 ~~--------------~yivmEy~~gG~L~~~i~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl 165 (311)
T 4aw0_A 105 EK--------------LYFGLSYAKNGELLKYIRK-----IGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 165 (311)
T ss_dssp SE--------------EEEEECCCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CE--------------EEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE
Confidence 64 4999999999999999986 2469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+|+.+...... ......+||+.|||||++.+ ..|+.++||||+||++|+
T Consensus 166 ~~~-------g~vKl~DFGla~~~~~~~~~--------~~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilye 226 (311)
T 4aw0_A 166 NED-------MHIQITDFGTAKVLSPESKQ--------ARANSFVGTAQYVSPELLTE----KSACKSSDLWALGCIIYQ 226 (311)
T ss_dssp CTT-------SCEEECCCTTCEECCTTTTC--------CCBCCCCSCGGGCCHHHHHH----SCBCHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEEEcCCceecCCCCCc--------ccccCcccCcccCCHHHHcC----CCCCcHHHHHHHHHHHHH
Confidence 987 88999999999876432211 12235679999999999987 578999999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|++|+.||.+.+..++...|..+... ++. ..++++++||.+||+.||++|||
T Consensus 227 ml~G~~PF~~~~~~~~~~~i~~~~~~-~p~---------------------------~~s~~~~dli~~lL~~dp~~R~t 278 (311)
T 4aw0_A 227 LVAGLPPFRAGNEGLIFAKIIKLEYD-FPE---------------------------KFFPKARDLVEKLLVLDATKRLG 278 (311)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHTCCC-CCT---------------------------TCCHHHHHHHHHHSCSSGGGSTT
T ss_pred HHhCCCCCCCCCHHHHHHHHHcCCCC-CCc---------------------------ccCHHHHHHHHHHccCCHhHCcC
Confidence 99999999998888888887665421 111 34567999999999999999999
Q ss_pred HHH------HHHHHHhhcC
Q 001143 1122 AGD------LYEMFVARTS 1134 (1141)
Q Consensus 1122 a~E------lL~~L~~~~~ 1134 (1141)
++| |++|+||+.-
T Consensus 279 ~~e~~~~~~i~~Hp~F~~i 297 (311)
T 4aw0_A 279 CEEMEGYGPLKAHPFFESV 297 (311)
T ss_dssp SGGGTCHHHHHTSGGGTTC
T ss_pred hHHHcCCHHHHCCCCcCCC
Confidence 987 5888998753
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2.3e-48 Score=440.28 Aligned_cols=266 Identities=24% Similarity=0.373 Sum_probs=207.9
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.+.++|++.++||+|+||+||+|++.+ .||||+++ .........+.| .+|+.+|++++|||||++++++.++.
T Consensus 33 i~~~~l~l~~~iG~G~fG~Vy~~~~~~-~vAvK~~~--~~~~~~~~~~~f----~~E~~il~~l~HpNIV~l~g~~~~~~ 105 (307)
T 3omv_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILK--VVDPTPEQFQAF----RNEVAVLRKTRHVNILLFMGYMTKDN 105 (307)
T ss_dssp CCTTSCCEEEECCCCSSSEEEEEESSS-EEEEEECC--CSSCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred EcHHHeEEeeEEeeCCCcEEEEEEECC-cEEEEEEE--ecCCCHHHHHHH----HHHHHHHHhCCCCCEeeEEEEEECCe
Confidence 346788999999999999999999865 57888754 333344444444 89999999999999999999875422
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.+||||||+||+|.++++. ...++++.++..|+.||+.||+|||+++||||||||+|||++
T Consensus 106 ---------------~~iVmEy~~gGsL~~~l~~----~~~~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~ 166 (307)
T 3omv_A 106 ---------------LAIVTQWCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH 166 (307)
T ss_dssp ---------------CEEEEECCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE
T ss_pred ---------------EEEEEEcCCCCCHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC
Confidence 3899999999999999975 234699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +++||+|||+|+........ ......+||+.|||||++.+.. ...|+.++|||||||++|||
T Consensus 167 ~~-------~~~Ki~DFGla~~~~~~~~~--------~~~~~~~GT~~ymAPE~l~~~~-~~~y~~ksDVwS~Gvvl~El 230 (307)
T 3omv_A 167 EG-------LTVKIGDFGLATVKSRWSGS--------QQVEQPTGSVLWMAPEVIRMQD-NNPFSFQSDVYSYGIVLYEL 230 (307)
T ss_dssp TT-------EEEEECCCSSCBC--------------------CCCCTTSCCHHHHHCCS-SCCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEeeccCceecccCCcc--------eeecccccCCCccCHHHhhccC-CCCCCcHHHhHhHHHHHHHH
Confidence 88 89999999999765432111 1123457999999999997522 24689999999999999999
Q ss_pred HhCCCCCCCCCHHH-HHHHHHhCCCC-CchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1043 LTLQVPYMGLSELE-IHDLIQMGKRP-RLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~e-l~~~I~~~~~p-~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+||+.||.+.+..+ +...+..+..+ .+. .....+++.+.+|+.+||+.||++||
T Consensus 231 ltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~------------------------~~~~~~~~~l~~li~~cl~~dP~~RP 286 (307)
T 3omv_A 231 MTGELPYSHINNRDQIIFMVGRGYASPDLS------------------------KLYKNCPKAMKRLVADCVKKVKEERP 286 (307)
T ss_dssp HHSSCTTTTCCCHHHHHHHHHTTCCCCCST------------------------TSCTTSCHHHHHHHHHHTCSSSTTSC
T ss_pred HHCCCCCCCCChHHHHHHHHhcCCCCCCcc------------------------cccccchHHHHHHHHHHcCCCHhHCc
Confidence 99999998765544 33444433222 111 01125677899999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
||.||+++++....
T Consensus 287 s~~ei~~~Le~l~~ 300 (307)
T 3omv_A 287 LFPQILSSIELLQH 300 (307)
T ss_dssp CHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999887543
No 6
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=9.6e-49 Score=436.68 Aligned_cols=257 Identities=23% Similarity=0.294 Sum_probs=199.6
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.+.+|++.+.||+|+||+||+|++. +..||+|+...... .. .....++.+|+.++++++|||||++++++.+.
T Consensus 11 ~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~--~~---~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~ 85 (275)
T 3hyh_A 11 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVL--AK---SDMQGRIEREISYLRLLRHPHIIKLYDVIKSK 85 (275)
T ss_dssp ---CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC-----------CHHHHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred EeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHc--CC---HHHHHHHHHHHHHHHHCCCCCCCeEEEEEEEC
Confidence 3678999999999999999999974 67788887543221 11 12223458999999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+. .|+||||+ +|+|.+++.+ ...+++.+++.|+.||+.||+|||++||+||||||+|||+
T Consensus 86 ~~--------------~~ivmEy~-~g~L~~~l~~-----~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl 145 (275)
T 3hyh_A 86 DE--------------IIMVIEYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 145 (275)
T ss_dssp SE--------------EEEEEECC-CEEHHHHHHH-----SCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE
T ss_pred CE--------------EEEEEeCC-CCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE
Confidence 53 49999999 5899999976 3479999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+|+...... .....+||+.|||||++.+ ...++.++||||+||++|+
T Consensus 146 ~~~-------~~vkl~DFGla~~~~~~~-----------~~~~~~GT~~Y~APE~~~~---~~y~~~~~DiwSlGvily~ 204 (275)
T 3hyh_A 146 DEH-------LNVKIADFGLSNIMTDGN-----------FLKTSCGSPNYAAPEVISG---KLYAGPEVDVWSCGVILYV 204 (275)
T ss_dssp CTT-------CCEEECCSSCC--------------------------CTTSCHHHHSS---SSCCCTHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeecCCCeecCCCC-----------ccCCeeECcccCChhhhcC---CCCCCChhhhHHHHHHHHH
Confidence 887 889999999997654321 1124579999999999986 2234689999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|+||+.||.+.+..++...+..+..+ ++ ...++++.+||.+||+.||++|||
T Consensus 205 lltg~~PF~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~~L~~dP~~R~s 256 (275)
T 3hyh_A 205 MLCRRLPFDDESIPVLFKNISNGVYT-LP---------------------------KFLSPGAAGLIKRMLIVNPLNRIS 256 (275)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHTCCC-CC---------------------------TTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHHCCCCCCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHccCChhHCcC
Confidence 99999999988888887777655432 11 034567999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
++|+++|+|++..
T Consensus 257 ~~eil~hpw~k~~ 269 (275)
T 3hyh_A 257 IHEIMQDDWFKVD 269 (275)
T ss_dssp HHHHHHCHHHHTT
T ss_pred HHHHHcCcccccC
Confidence 9999999999854
No 7
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.6e-49 Score=461.34 Aligned_cols=256 Identities=26% Similarity=0.412 Sum_probs=216.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..|++.++||+|+||.||+|++. +..||+|+...... ...+ .+.+|+.+|++++|||||+++++|.+.+.
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~----~~~~----~~~~Ei~il~~l~HpnIV~l~~~~~~~~~ 222 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ----QRRE----LLFNEVVIMRDYQHENVVEMYNSYLVGDE 222 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTC----SSGG----GHHHHHHHHHHCCCTTBCCEEEEEEETTE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccch----hHHH----HHHHHHHHHHhCCCCCCCceEEEEEECCE
Confidence 45999999999999999999985 66788887654321 1122 34799999999999999999999987653
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+|||||||+||+|.++++. ..+++.++..|+.||+.||+|||++|||||||||+||||+.
T Consensus 223 --------------~~iVmEy~~gG~L~~~i~~------~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~ 282 (423)
T 4fie_A 223 --------------LWVVMEFLEGGALTDIVTH------TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTH 282 (423)
T ss_dssp --------------EEEEEECCTTEEHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECT
T ss_pred --------------EEEEEeCCCCCcHHHHHhc------cCCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcC
Confidence 4999999999999999975 35999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+|+.+..... .....+||+.|||||++.+ ..|+.++|||||||++|||+
T Consensus 283 ~-------g~vKl~DFGla~~~~~~~~----------~~~~~~GTp~YmAPEvl~~----~~y~~~~DiWSlGvilyeml 341 (423)
T 4fie_A 283 D-------GRVKLSDFGFCAQVSKEVP----------RRKSLVGTPYWMAPELISR----LPYGPEVDIWSLGIMVIEMV 341 (423)
T ss_dssp T-------CCEEECCCTTCEECCSSCC----------CBCCCEECTTTCCHHHHTT----CCBCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEecCccceECCCCCc----------cccccccCcCcCCHHHHCC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 8899999999986543211 1235679999999999976 57899999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|+.||.+.+..+++..|.....+.+... ...++++.+||.+||+.||++|||+.
T Consensus 342 ~G~~PF~~~~~~~~~~~i~~~~~~~~~~~-------------------------~~~s~~~~dli~~~L~~dP~~R~ta~ 396 (423)
T 4fie_A 342 DGEPPYFNEPPLKAMKMIRDNLPPRLKNL-------------------------HKVSPSLKGFLDRLLVRDPAQRATAA 396 (423)
T ss_dssp HSSCTTTTSCHHHHHHHHHHSCCCCCSCT-------------------------TSSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred HCCCCCCCcCHHHHHHHHHcCCCCCCccc-------------------------ccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 99999999888888888766544332210 14567799999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 001143 1124 DLYEMFVARTSS 1135 (1141)
Q Consensus 1124 ElL~~L~~~~~s 1135 (1141)
|+++|+|+....
T Consensus 397 ell~Hp~~~~~~ 408 (423)
T 4fie_A 397 ELLKHPFLAKAG 408 (423)
T ss_dssp HHTTCGGGGGCC
T ss_pred HHhcCHHhcCCC
Confidence 999999998654
No 8
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=2.2e-48 Score=439.51 Aligned_cols=261 Identities=24% Similarity=0.352 Sum_probs=212.8
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
.-++|.+.++||+|+||+||+|++. +..||||+. +. ......++| .+|+++|++++|||||+++|
T Consensus 11 ~r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l--~~--~~~~~~~~f----~~E~~il~~l~HpnIV~l~g 82 (299)
T 4asz_A 11 KRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTL--KD--ASDNARKDF----HREAELLTNLQHEHIVKFYG 82 (299)
T ss_dssp CGGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEE--CS--CCHHHHHHH----HHHHHHHTTCCCTTBCCEEE
T ss_pred CHHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEe--CC--CChHHHHHH----HHHHHHHHhCCCCCCccEEE
Confidence 3467999999999999999999874 345677764 32 233333444 89999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh--------cCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE--------TGEKHVSVKLALFIAQDVAAALVELHSKH 948 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~--------~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g 948 (1141)
++.+.+. .+||||||++|+|.++++.... .....+++.++..|+.||+.||+|||+++
T Consensus 83 ~~~~~~~--------------~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~ 148 (299)
T 4asz_A 83 VCVEGDP--------------LIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQH 148 (299)
T ss_dssp EECSSSS--------------EEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEeeCCE--------------EEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 9987653 4999999999999999986321 22357999999999999999999999999
Q ss_pred ccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCc
Q 001143 949 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL 1028 (1141)
Q Consensus 949 IvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ 1028 (1141)
||||||||+|||++.+ +.+||+|||+|+......... ......||+.|||||++.+ ..|+.
T Consensus 149 iiHRDlKp~NILl~~~-------~~~Ki~DFGla~~~~~~~~~~--------~~~~~~gt~~ymAPE~~~~----~~~~~ 209 (299)
T 4asz_A 149 FVHRDLATRNCLVGEN-------LLVKIGDFGMSRDVYSTDYYR--------VGGHTMLPIRWMPPESIMY----RKFTT 209 (299)
T ss_dssp CCCSCCSGGGEEECGG-------GCEEECCCSCHHHHTGGGCEE--------ETTTEEECGGGCCHHHHHH----CCCCH
T ss_pred cccCccCHhhEEECCC-------CcEEECCcccceecCCCCcee--------ecCceecChhhcCHHHHcC----CCCCc
Confidence 9999999999999988 889999999998654322111 1123468999999999987 67899
Q ss_pred hhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHH
Q 001143 1029 EVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1107 (1141)
Q Consensus 1029 ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1107 (1141)
++|||||||++|||+| |+.||.+.+..++...+..+..+..+. .+++++.+|
T Consensus 210 k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~~~~l 262 (299)
T 4asz_A 210 ESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPR---------------------------TCPQEVYEL 262 (299)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cchHHHHHH
Confidence 9999999999999999 899999988888888887776544332 456679999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
+.+||+.||++||||.||++.+...
T Consensus 263 i~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 263 MLGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp HHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHcCCChhHCcCHHHHHHHHHHH
Confidence 9999999999999999998877654
No 9
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4e-48 Score=439.13 Aligned_cols=264 Identities=21% Similarity=0.323 Sum_probs=215.4
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccce
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 874 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl 874 (1141)
..++.++++.++||+|+||+||+|++. +..||||+ ++.... ....+. |.+|+.++++++|||||++
T Consensus 22 ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~--l~~~~~-~~~~~~----f~~E~~il~~l~HpNIV~l 94 (308)
T 4gt4_A 22 EISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT--LKDKAE-GPLREE----FRHEAMLRARLQHPNVVCL 94 (308)
T ss_dssp BCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEE--CCC-CC-C-CHHH----HHHHHHHHHHCCCTTBCCE
T ss_pred cCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEE--ECcccC-hHHHHH----HHHHHHHHHhCCCCCCCCc
Confidence 345677899999999999999999973 34567766 432221 222233 4899999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 943 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----------~~~~Ls~~~i~~Ia~QIa~gL~y 943 (1141)
+|++.+.+.+ +||||||++|+|.+++...... ....+++.++..|+.||+.||+|
T Consensus 95 ~g~~~~~~~~--------------~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~y 160 (308)
T 4gt4_A 95 LGVVTKDQPL--------------SMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEY 160 (308)
T ss_dssp EEEECSSSSC--------------EEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHH
T ss_pred ceEEEECCEE--------------EEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 9999876544 9999999999999999753211 12369999999999999999999
Q ss_pred HHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001143 944 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1023 (1141)
Q Consensus 944 LHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1023 (1141)
||+++||||||||+||||+.+ +++||+|||+|+.+...... .......||+.|||||++.+
T Consensus 161 LH~~~iiHRDLK~~NILl~~~-------~~~Ki~DFGlar~~~~~~~~--------~~~~~~~gt~~ymAPE~l~~---- 221 (308)
T 4gt4_A 161 LSSHHVVHKDLATRNVLVYDK-------LNVKISDLGLFREVYAADYY--------KLLGNSLLPIRWMAPEAIMY---- 221 (308)
T ss_dssp HHHTTCCCSCCSGGGEEECGG-------GCEEECCSCCBCGGGGGGCB--------CSSSSSCBCGGGCCHHHHHH----
T ss_pred HHhCCCCCCCccccceEECCC-------CCEEECCcccceeccCCCce--------eEecccccCCcccCHHHHhC----
Confidence 999999999999999999988 88999999999865432211 11234569999999999987
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHH
Q 001143 1024 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1102 (1141)
Q Consensus 1024 ~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1141)
..|+.++|||||||++|||+| |+.||.+.+..++...+..+..++.+. .+++
T Consensus 222 ~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~ 274 (308)
T 4gt4_A 222 GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVLPCPD---------------------------DCPA 274 (308)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCH
T ss_pred CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCcc---------------------------cchH
Confidence 678999999999999999999 899999999888888887666544321 4567
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1103 FLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1103 ~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.+.+|+.+||+.||++||||.||+++|...
T Consensus 275 ~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 275 WVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 799999999999999999999999999754
No 10
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=4.8e-48 Score=442.42 Aligned_cols=263 Identities=24% Similarity=0.350 Sum_probs=209.7
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
...+|.+.++||+|+||+||+|++. +..||||+. +. ......++| .+|+++|++++|||||++++
T Consensus 39 ~~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l--~~--~~~~~~~~f----~~E~~il~~l~HpnIV~l~g 110 (329)
T 4aoj_A 39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKAL--KE--ASESARQDF----QREAELLTMLQHQHIVRFFG 110 (329)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEE--SC--CSHHHHHHH----HHHHHHHTTCCCTTBCCEEE
T ss_pred CHHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEE--Cc--CCHHHHHHH----HHHHHHHHhCCCCCCCcEEE
Confidence 4467899999999999999999974 455777764 32 233334444 89999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh----------cCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE----------TGEKHVSVKLALFIAQDVAAALVELHS 946 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~----------~~~~~Ls~~~i~~Ia~QIa~gL~yLHs 946 (1141)
++.+... .+||||||++|+|.++++.... ....++++.+++.|+.||+.||+|||+
T Consensus 111 ~~~~~~~--------------~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~ 176 (329)
T 4aoj_A 111 VCTEGRP--------------LLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG 176 (329)
T ss_dssp EECSSSS--------------EEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCE--------------EEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 9987553 4999999999999999976321 123469999999999999999999999
Q ss_pred CCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC
Q 001143 947 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1026 (1141)
Q Consensus 947 ~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1026 (1141)
++||||||||+|||++.+ +++||+|||+|+.+...... .......||+.|||||++.+ ..|
T Consensus 177 ~~iiHRDLKp~NILl~~~-------~~~Ki~DFGla~~~~~~~~~--------~~~~~~~gt~~ymAPE~~~~----~~~ 237 (329)
T 4aoj_A 177 LHFVHRDLATRNCLVGQG-------LVVKIGDFGMSRDIYSTDYY--------RVGGRTMLPIRWMPPESILY----RKF 237 (329)
T ss_dssp TTCCCSCCCGGGEEEETT-------TEEEECCCC------------------------CCCCGGGCCHHHHTT----CCC
T ss_pred CCeecccccHhhEEECCC-------CcEEEcccccceeccCCCcc--------eecCcccccccccChhhhcC----CCC
Confidence 999999999999999988 89999999999865432211 11224569999999999986 678
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHH
Q 001143 1027 GLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1105 (1141)
Q Consensus 1027 s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1105 (1141)
+.++|||||||++|||+| |+.||.+.+..++...+..+.++..+. .+++++.
T Consensus 238 ~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~p~---------------------------~~~~~~~ 290 (329)
T 4aoj_A 238 TTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELERPR---------------------------ACPPEVY 290 (329)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCCCT---------------------------TCCHHHH
T ss_pred CccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCcc---------------------------cccHHHH
Confidence 999999999999999999 899999988888888887766544332 4567799
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1106 DVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1106 dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
+|+.+||+.||++||||.||+++|.....
T Consensus 291 ~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 291 AIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 99999999999999999999999877543
No 11
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.6e-49 Score=446.05 Aligned_cols=257 Identities=24% Similarity=0.256 Sum_probs=207.8
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~-----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
.+.++|++.+.||+|+||+||+|++. +..||+|+...... ...... ++.+|+.+|++++|||||+++++
T Consensus 21 ~~p~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~----~~~~E~~il~~l~HpnIv~l~~~ 94 (304)
T 3ubd_A 21 ADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATL--KVRDRV----RTKMERDILVEVNHPFIVKLHYA 94 (304)
T ss_dssp CCGGGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEE--EEEECC----------CCCCCCCCTTEECEEEE
T ss_pred CCccccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHc--ChHHHH----HHHHHHHHHHHCCCCCCCeEEEE
Confidence 34578999999999999999999872 45689988643221 111112 23789999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+.+++. .|||||||+||+|.+++++ ...+++.+++.|+.||+.||+|||++||+||||||+
T Consensus 95 ~~~~~~--------------~~ivmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~ 155 (304)
T 3ubd_A 95 FQTEGK--------------LYLILDFLRGGDLFTRLSK-----EVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPE 155 (304)
T ss_dssp EEETTE--------------EEEEECCCTTCEEHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGG
T ss_pred EEECCE--------------EEEEEEcCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHH
Confidence 987654 4999999999999999986 246999999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||++.+ +.+||+|||+|+...... ......+||+.|||||++.+ ..|+.++|||||||
T Consensus 156 NILl~~~-------g~vKl~DFGla~~~~~~~----------~~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGv 214 (304)
T 3ubd_A 156 NILLDEE-------GHIKLTDFGLSKESIDHE----------KKAYSFCGTVEYMAPEVVNR----RGHTQSADWWSFGV 214 (304)
T ss_dssp GEEECTT-------SCEEEESSEEEEC---------------CCCCSCCCCGGGCCHHHHHT----SCCCTHHHHHHHHH
T ss_pred HeEEcCC-------CCEEecccccceeccCCC----------ccccccccCcccCCHHHhcc----CCCCCCCcccchHH
Confidence 9999988 889999999997543321 11234679999999999986 57899999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1038 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
++|||+||+.||.+.+..++...|..+..+ ++ ...++++.+||.+||+.||+
T Consensus 215 ilyemltG~~PF~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~~L~~dP~ 266 (304)
T 3ubd_A 215 LMFEMLTGTLPFQGKDRKETMTMILKAKLG-MP---------------------------QFLSPEAQSLLRMLFKRNPA 266 (304)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHTCSSGG
T ss_pred HHHHHHhCCCCCCCcCHHHHHHHHHcCCCC-CC---------------------------CcCCHHHHHHHHHHcccCHH
Confidence 999999999999998888888887655432 11 14566799999999999999
Q ss_pred CCCC-----HHHHHHHHHhhc
Q 001143 1118 ERPT-----AGDLYEMFVART 1133 (1141)
Q Consensus 1118 ~RPS-----a~ElL~~L~~~~ 1133 (1141)
+||| ++|+++|+||+.
T Consensus 267 ~R~ta~~~~~~eil~Hp~f~~ 287 (304)
T 3ubd_A 267 NRLGAGPDGVEEIKRHSFFST 287 (304)
T ss_dssp GSTTCSTTTHHHHHTSGGGTT
T ss_pred HCCCCCcCCHHHHHcCccccC
Confidence 9998 589999999975
No 12
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.4e-48 Score=444.56 Aligned_cols=255 Identities=25% Similarity=0.344 Sum_probs=205.1
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.+..|++.++||+|+||.||+|++. +..||+|+.+.+.. ..+|+.++++++|||||++++++.+.
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------------~~~E~~il~~l~HpnIV~l~~~~~~~ 122 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------------RVEELVACAGLSSPRIVPLYGAVREG 122 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------------CTHHHHTTTTCCCTTBCCEEEEEEET
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------------HHHHHHHHHhCCCCCCCcEEEEEEEC
Confidence 3567899999999999999999985 56788887653321 14799999999999999999999876
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+. .|||||||+||+|.+++++ ...+++.+++.|+.||+.||+|||++|||||||||+|||+
T Consensus 123 ~~--------------~~ivmEy~~gg~L~~~l~~-----~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl 183 (336)
T 4g3f_A 123 PW--------------VNIFMELLEGGSLGQLIKQ-----MGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL 183 (336)
T ss_dssp TE--------------EEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEE
T ss_pred CE--------------EEEEEeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEE
Confidence 53 4999999999999999986 2469999999999999999999999999999999999999
Q ss_pred ecccccCCCCC-eEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 962 DLERKKADGKP-VVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 962 d~~~~~~~~~~-~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
+.+ + .+||+|||+|+.+....... ........+||+.|||||++.+ ..|+.++|||||||++|
T Consensus 184 ~~~-------g~~vKl~DFGla~~~~~~~~~~-----~~~~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvily 247 (336)
T 4g3f_A 184 SSD-------GSRAALCDFGHALCLQPDGLGK-----SLLTGDYIPGTETHMAPEVVMG----KPCDAKVDIWSSCCMML 247 (336)
T ss_dssp CTT-------SCCEEECCCTTCEEC-----------------CCCCCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHH
T ss_pred eCC-------CCEEEEeeCCCCeEccCCCccc-----ceecCCccccCccccCHHHHCC----CCCCcHHHHHHHHHHHH
Confidence 877 5 59999999998765422110 0112234579999999999987 67899999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
||+||+.||.+.+..++...|.....+.. .....+++.+.+||.+||+.||.+||
T Consensus 248 emltG~~Pf~~~~~~~~~~~i~~~~~~~~-------------------------~~~~~~s~~~~~li~~~L~~dP~~R~ 302 (336)
T 4g3f_A 248 HMLNGCHPWTQYFRGPLCLKIASEPPPIR-------------------------EIPPSCAPLTAQAIQEGLRKEPVHRA 302 (336)
T ss_dssp HHHHSSCSSTTTCCSCCHHHHHHSCCGGG-------------------------GSCTTSCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHCcCCCCCCCHHHHHHHHHcCCCCch-------------------------hcCccCCHHHHHHHHHHccCCHhHCc
Confidence 99999999988766666666654432110 00115667899999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
|+.|+++++..
T Consensus 303 sa~el~~~l~~ 313 (336)
T 4g3f_A 303 SAMELRRKVGK 313 (336)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999887644
No 13
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-46 Score=436.67 Aligned_cols=292 Identities=16% Similarity=0.199 Sum_probs=214.4
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||+||+|++. +..||+|+. +.........+ ++.+|+.+|++++|||||++++++.....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i--~~~~~~~~~~~----~~~~Ei~il~~l~HpnIv~l~~~~~~~~~ 127 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKI--PNAFDVVTNAK----RTLRELKILKHFKHDNIIAIKDILRPTVP 127 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEE--TTTTSSHHHHH----HHHHHHHHHHHCCCTTBCCEEEECCCSSC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEE--CccccchHHHH----HHHHHHHHHHhcCCCCcceEeeeeecccc
Confidence 47999999999999999999985 566777774 33333333333 34799999999999999999999876432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+ ....++|||||||+ |+|.+++.. ...+++.+++.|++||+.||+|||++|||||||||+|||++.
T Consensus 128 ~--------~~~~~~~ivmE~~~-g~L~~~i~~-----~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~ 193 (398)
T 4b99_A 128 Y--------GEFKSVYVVLDLME-SDLHQIIHS-----SQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE 193 (398)
T ss_dssp T--------TTCCCEEEEEECCS-EEHHHHHTS-----SSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECT
T ss_pred c--------ccCCEEEEEEeCCC-CCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCC
Confidence 2 12236799999996 789999865 357999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+|+.+...... ........+||+.|||||++.+ ...++.++||||+||++|||+
T Consensus 194 ~-------~~~Ki~DFGla~~~~~~~~~------~~~~~~~~~GT~~Y~APEv~~~---~~~~~~~~DiWSlG~il~ell 257 (398)
T 4b99_A 194 N-------CELKIGDFGMARGLCTSPAE------HQYFMTEYVATRWYRAPELMLS---LHEYTQAIDLWSVGCIFGEML 257 (398)
T ss_dssp T-------CCEEECCCTTCBCC-------------CCCCCSSCCCCTTCCHHHHTT---CSCCCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeecceeeecccCccc------cccccccceeChHhcCHHHhcC---CCCCCChhheehhHHHHHHHH
Confidence 7 88999999999865432111 1112335689999999999876 245789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCC---CchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE---KPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++||.+.+..+....|............................... ........++++.+||.+||++||.+||
T Consensus 258 ~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ 337 (398)
T 4b99_A 258 ARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARI 337 (398)
T ss_dssp HTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSC
T ss_pred HCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCc
Confidence 9999999988888777774322221111111100000000000000000 0111124567899999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001143 1121 TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~ 1133 (1141)
|+.|+++|+|+..
T Consensus 338 ta~e~L~Hp~f~~ 350 (398)
T 4b99_A 338 SAAAALRHPFLAK 350 (398)
T ss_dssp CHHHHTTSGGGTT
T ss_pred CHHHHhcCHhhCc
Confidence 9999999999974
No 14
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=1.1e-45 Score=426.60 Aligned_cols=263 Identities=23% Similarity=0.366 Sum_probs=208.8
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCcccee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMY 875 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkll 875 (1141)
+.++|++.++||+|+||+||+|++.+ ..||||+.. .. ......+.+ .+|+.+|.++. |||||+++
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~--~~-~~~~~~~~~----~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK--EG-ATHSEHRAL----MSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEEC--TT-CCHHHHHHH----HHHHHHHHHHCCCTTBCCEE
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEc--cc-cChHHHHHH----HHHHHHHHHcCCCCcEEEEE
Confidence 34679999999999999999999843 246666543 22 223333444 89999999996 59999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHH
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVEL 944 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----------~~~~Ls~~~i~~Ia~QIa~gL~yL 944 (1141)
|++.+.+. ..+||||||++|+|.++|+..... ....+++.++..|+.||+.||+||
T Consensus 135 g~~~~~~~-------------~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yL 201 (353)
T 4ase_A 135 GACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL 201 (353)
T ss_dssp EEECCTTS-------------CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCC-------------EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhH
Confidence 99865321 249999999999999999864321 134589999999999999999999
Q ss_pred HHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC
Q 001143 945 HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN 1024 (1141)
Q Consensus 945 Hs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 1024 (1141)
|+++||||||||+|||++.+ +.+||+|||+|+.+....... ......||+.|||||++.+ .
T Consensus 202 H~~~iiHRDLK~~NILl~~~-------~~vKi~DFGlar~~~~~~~~~--------~~~~~~gt~~ymAPE~l~~----~ 262 (353)
T 4ase_A 202 ASRKCIHRDLAARNILLSEK-------NVVKICDFGLARDIYKDPDYV--------RKGDARLPLKWMAPETIFD----R 262 (353)
T ss_dssp HHTTCCCSCCSGGGEEECGG-------GCEEECCCGGGSCTTTCTTSE--------EETTEEECGGGCCHHHHHH----C
T ss_pred hhCCeecCccCccceeeCCC-------CCEEECcchhhhhcccCCCce--------eeccccccccccCHHHHhc----C
Confidence 99999999999999999988 889999999998654322110 1124568999999999987 6
Q ss_pred CCCchhhHHHHHHHHHHHHh-CCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHH
Q 001143 1025 LYGLEVDIWSYGCLLLELLT-LQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1102 (1141)
Q Consensus 1025 ~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1141)
.|+.++|||||||++|||+| |+.||.+... .++...+..+.++..+. .+++
T Consensus 263 ~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~---------------------------~~~~ 315 (353)
T 4ase_A 263 VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD---------------------------YTTP 315 (353)
T ss_dssp CCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCCCCT---------------------------TCCH
T ss_pred CCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCCCCCCc---------------------------cCCH
Confidence 78999999999999999998 8999987653 44556666665544332 4566
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1103 FLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1103 ~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
++.+++.+||+.||++||||.||++||...
T Consensus 316 ~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 316 EMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 799999999999999999999999998654
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.3e-46 Score=418.20 Aligned_cols=277 Identities=24% Similarity=0.287 Sum_probs=192.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||+||+|++. +..||+|+..... .....+ ++.+|+.+|++++|||||++++++.+.+.
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~---~~~~~~----~~~~E~~il~~l~HpnIV~~~~~~~~~~~ 77 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELARE----KVMREVKALAKLEHPGIVRYFNAWLEKNT 77 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS---SHHHHH----HHHHHHHHHTTCCCTTBCCEEEEEEEEC-
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC---CHHHHH----HHHHHHHHHHhCCCCCCCeEEEEEEecCc
Confidence 46899999999999999999985 6677888754331 222223 34899999999999999999999876442
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.... .......+.|+|||||+||+|.++++.. ......++..++.|+.||+.||+|||++|||||||||+|||++.
T Consensus 78 ~~~~--~~~~~~~~l~ivmE~~~gg~L~~~l~~~--~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~ 153 (299)
T 4g31_A 78 TEKL--QPSSPKVYLYIQMQLCRKENLKDWMNGR--CTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM 153 (299)
T ss_dssp -----------CEEEEEEEECCCSCCHHHHHHTC--CSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECT
T ss_pred cccc--cccCCCcEEEEEEecCCCCcHHHHHHhc--CCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECC
Confidence 1000 0011223579999999999999999762 11223567778999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeecccccccccccccccc--ccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCI--AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~--~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+ +.+||+|||+|+.+......... ...........+||+.|||||++.+ ..|+.++|||||||++||
T Consensus 154 ~-------~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~----~~y~~~~DiwSlGvilye 222 (299)
T 4g31_A 154 D-------DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHG----NSYSHKVDIFSLGLILFE 222 (299)
T ss_dssp T-------CCEEECCCCCC--------------------------CCCTTSCHHHHTT----CCCCTHHHHHHHHHHHHH
T ss_pred C-------CcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcC----CCCCCHHHHHHHHHHHHH
Confidence 7 78999999999876543211100 0000111234579999999999986 578999999999999999
Q ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++ ||.+.... .....+.....|.. ....++.+.+||.+||+.||.+||
T Consensus 223 ll~---Pf~~~~~~~~~~~~~~~~~~p~~---------------------------~~~~~~~~~~li~~~L~~dP~~Rp 272 (299)
T 4g31_A 223 LLY---PFSTQMERVRTLTDVRNLKFPPL---------------------------FTQKYPCEYVMVQDMLSPSPMERP 272 (299)
T ss_dssp HHS---CCSSHHHHHHHHHHHHTTCCCHH---------------------------HHHHCHHHHHHHHHHTCSSGGGSC
T ss_pred Hcc---CCCCccHHHHHHHHHhcCCCCCC---------------------------CcccCHHHHHHHHHHcCCChhHCc
Confidence 996 78642211 12222332222211 113345578899999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
|+.|+++|+|++.-
T Consensus 273 s~~eil~h~~~~~~ 286 (299)
T 4g31_A 273 EAINIIENAVFEDL 286 (299)
T ss_dssp CHHHHHTSGGGCCC
T ss_pred CHHHHhcCHhhCCC
Confidence 99999999999753
No 16
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.7e-45 Score=417.02 Aligned_cols=268 Identities=25% Similarity=0.297 Sum_probs=200.1
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
.+|.+.++||+|+||+||+|+++++.||||+.... ..+.+ ....|+..+.+++|||||++++++.+++.
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~-------~~~~~--~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~-- 71 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERSW--FREAEIYQTVMLRHENILGFIAADNKDNG-- 71 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGG-------GHHHH--HHHHHHHTSTTCCCTTBCCEEEEEEEECS--
T ss_pred cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECcc-------chhhH--HHHHHHHHHhcCCCCCCCcEEEEEEecCC--
Confidence 35889999999999999999999999999986422 11122 12456777778899999999999986432
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCCC
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------HIMHRDIKSE 957 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~--------gIvHrDLKP~ 957 (1141)
...+.|||||||++|+|.++++. ..+++..+.+|+.|++.||+|||++ +||||||||+
T Consensus 72 --------~~~~~~lV~Ey~~~gsL~~~l~~------~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~ 137 (303)
T 3hmm_A 72 --------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 137 (303)
T ss_dssp --------SSEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGG
T ss_pred --------CceEEEEEecCCCCCcHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcc
Confidence 12357999999999999999986 3699999999999999999999987 9999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC--CCCCCchhhHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK--PNLYGLEVDIWSY 1035 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~~~~s~ksDVWSL 1035 (1141)
|||++.+ +++||+|||+|+......... .......+||+.|||||++.+... ...++.++|||||
T Consensus 138 NILl~~~-------~~~Ki~DFGla~~~~~~~~~~------~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~ 204 (303)
T 3hmm_A 138 NILVKKN-------GTCCIADLGLAVRHDSATDTI------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 204 (303)
T ss_dssp GEEECTT-------SCEEECCCTTCEEEETTTTEE------SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHH
T ss_pred cEEECCC-------CCEEEEeCCCCccccCCCCce------eeecccccccccccCHHHhcccccccCCccChhHhhhhH
Confidence 9999988 899999999998765432211 011234579999999999976321 1236789999999
Q ss_pred HHHHHHHHhCCCCCCCC---------------CHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhhhh
Q 001143 1036 GCLLLELLTLQVPYMGL---------------SELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELE 1099 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~~---------------~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 1099 (1141)
||++|||+||..||... ...++...+ ....+|.++.... ...
T Consensus 205 Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~----------------------~~~ 262 (303)
T 3hmm_A 205 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQ----------------------SCE 262 (303)
T ss_dssp HHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGG----------------------SSH
T ss_pred HHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCcccc----------------------chH
Confidence 99999999997765321 112222222 2222233222111 115
Q ss_pred hHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1100 TLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1100 ~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.++.+.+|+.+||+.||++||||.||++.|....
T Consensus 263 ~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~ 296 (303)
T 3hmm_A 263 ALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 296 (303)
T ss_dssp HHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHH
Confidence 6678999999999999999999999999987643
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=8.3e-44 Score=412.58 Aligned_cols=286 Identities=19% Similarity=0.167 Sum_probs=198.4
Q ss_pred CCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEe
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKI 879 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~-----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~ 879 (1141)
+.|++.++||+|+||+||+|+++ +..||+|+. .... .. .++.+|+++|+.+ +|||||+++++|.
T Consensus 21 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i--~~~~----~~----~~~~~E~~~l~~~~~h~nIv~l~~~~~ 90 (361)
T 4f9c_A 21 NVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHL--IPTS----HP----IRIAAELQCLTVAGGQDNVMGVKYCFR 90 (361)
T ss_dssp GTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEE--CTTS----CH----HHHHHHHHHHHHTCSBTTBCCCSEEEE
T ss_pred CcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEE--cccc----CH----HHHHHHHHHHHHhcCCCCCceEEEEEE
Confidence 46999999999999999999863 345666653 2211 11 1237899999998 6999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.+ +.|+||||++||+|.++++ .+++.+++.|+.||+.||+|||++||+||||||+||
T Consensus 91 ~~~--------------~~~lvmE~~~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNi 148 (361)
T 4f9c_A 91 KND--------------HVVIAMPYLEHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNF 148 (361)
T ss_dssp ETT--------------EEEEEEECCCCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred ECC--------------EEEEEEeCCCcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHe
Confidence 765 4599999999999999984 389999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeecccccccccccccccc------------------ccCCCCCCCCccCCCcccchhhhcccc
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI------------------AHRGIPAPDVCVGTPRWMAPEVLRAMH 1021 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~------------------~~~~~~~~~~~~GT~~Y~APE~l~~~~ 1021 (1141)
|++.+. +.+||+|||+|+........... ...........+||+.|+|||++.+
T Consensus 149 Ll~~~~------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-- 220 (361)
T 4f9c_A 149 LYNRRL------KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTK-- 220 (361)
T ss_dssp EEETTT------TEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTT--
T ss_pred EEeCCC------CeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcC--
Confidence 998652 68999999999765432110000 0000011234579999999999976
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCCCCCC-CCHHHHHHHHHhCC-CCCch----------------------hHHhhhc
Q 001143 1022 KPNLYGLEVDIWSYGCLLLELLTLQVPYMG-LSELEIHDLIQMGK-RPRLT----------------------DELEALG 1077 (1141)
Q Consensus 1022 ~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~-~~~~el~~~I~~~~-~p~l~----------------------~~l~~~~ 1077 (1141)
...|+.++||||+||++|||++|+.||.. .+..+....|.... .+... .......
T Consensus 221 -~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 299 (361)
T 4f9c_A 221 -CPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLR 299 (361)
T ss_dssp -CSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC
T ss_pred -CCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhc
Confidence 23588999999999999999999999954 34444444442110 00000 0000000
Q ss_pred cCccccccc----cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1078 SCHEHEVAQ----SGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1078 ~~~~~~~~~----~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.. ...... ..............++++.+||.+||++||++|||++|+++|+||+.
T Consensus 300 ~~-~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~ 358 (361)
T 4f9c_A 300 GM-DSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKD 358 (361)
T ss_dssp -----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTT
T ss_pred cc-cccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCC
Confidence 00 000000 00000000011245678999999999999999999999999999974
No 18
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.2e-43 Score=434.76 Aligned_cols=260 Identities=21% Similarity=0.261 Sum_probs=215.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+++|++.+.||+|+||+||+|++. +..+|+|+.... .....+. +.+|+.+|++++|||||+++++|.+..
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~----~~~~~~~----~~~Ei~il~~l~hpnIv~l~~~~~~~~ 227 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP----HESDKET----VRKEIQTMSVLRHPTLVNLHDAFEDDN 227 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHHHH----HHHHHHHHHHTCCTTBCCEEEEEECSS
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEecc----chhhHHH----HHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 568999999999999999999984 567788875422 2222333 479999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
++|||||||+||+|.++|.. ....+++.++..|+.||+.||+|||++||+||||||+|||++
T Consensus 228 --------------~~~iv~E~~~gg~L~~~i~~----~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~ 289 (573)
T 3uto_A 228 --------------EMVMIYEFMSGGELFEKVAD----EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 289 (573)
T ss_dssp --------------EEEEEEECCCCCBHHHHHTC----TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred --------------EEEEEEeecCCCcHHHHHHH----hCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhcccc
Confidence 35999999999999999864 234699999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+. .+.+||+|||+|+.+...... ...+||+.|||||++.+ ..|+.++||||+||++|||
T Consensus 290 ~~~-----~~~vKl~DFG~a~~~~~~~~~-----------~~~~GT~~y~APEv~~~----~~y~~~~DiWSlGvilyem 349 (573)
T 3uto_A 290 TKR-----SNELKLIDFGLTAHLDPKQSV-----------KVTTGTAEFAAPEVAEG----KPVGYYTDMWSVGVLSYIL 349 (573)
T ss_dssp SSS-----CCCEEECCCSSCEECCTTSEE-----------EEECSSGGGCCHHHHTT----CCBCHHHHHHHHHHHHHHH
T ss_pred CCC-----CCCEEEeeccceeEccCCCce-----------eeeEECccccCHHHhCC----CCCCcHHHHHHHHHHHHHH
Confidence 542 268999999999876542211 23569999999999987 5789999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||.+.+..+.+..|........... ....++++.+||.+||+.||.+|||+
T Consensus 350 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~dli~~~L~~dp~~R~t~ 405 (573)
T 3uto_A 350 LSGLSPFGGENDDETLRNVKSCDWNMDDSA------------------------FSGISEDGKDFIRKLLLADPNTRMTI 405 (573)
T ss_dssp HHSCCSSCCSSHHHHHHHHHTTCCCCCSGG------------------------GTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HHCCCCCCCcCHHHHHHHHHhCCCCCCccc------------------------ccCCCHHHHHHHHHHccCChhHCcCH
Confidence 999999999888888888765543211110 11456779999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001143 1123 GDLYEMFVARTS 1134 (1141)
Q Consensus 1123 ~ElL~~L~~~~~ 1134 (1141)
.|+++|+|+...
T Consensus 406 ~e~l~Hpw~~~~ 417 (573)
T 3uto_A 406 HQALEHPWLTPG 417 (573)
T ss_dssp HHHHHSTTTSCC
T ss_pred HHHhcCcCcCCC
Confidence 999999999754
No 19
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.4e-44 Score=437.65 Aligned_cols=261 Identities=20% Similarity=0.246 Sum_probs=206.7
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+.++++|++.++||+|+||.||+|++. +..+|+|+......... ...........++.+++.++|||||+++++|.
T Consensus 185 ~~slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~--~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~ 262 (689)
T 3v5w_A 185 HLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMK--QGETLALNERIMLSLVSTGDCPFIVCMSYAFH 262 (689)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHT--TCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE
T ss_pred CCchHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchh--hhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE
Confidence 567899999999999999999999984 66788887543211000 00111111134567778889999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.+. +|||||||+||+|.++|.+ ...+++..++.|+.||+.||+|||++|||||||||+||
T Consensus 263 ~~~~--------------lylVmEy~~GGdL~~~l~~-----~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNI 323 (689)
T 3v5w_A 263 TPDK--------------LSFILDLMNGGDLHYHLSQ-----HGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANI 323 (689)
T ss_dssp CSSE--------------EEEEECCCCSCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGE
T ss_pred ECCE--------------EEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHe
Confidence 7664 4999999999999999986 24699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
||+.+ +++||+|||+|+.+... .....+||+.|||||++.. +..|+.++|||||||++
T Consensus 324 Lld~~-------G~vKL~DFGlA~~~~~~------------~~~t~~GTp~YmAPEvl~~---~~~y~~~vDiWSLGvil 381 (689)
T 3v5w_A 324 LLDEH-------GHVRISDLGLACDFSKK------------KPHASVGTHGYMAPEVLQK---GVAYDSSADWFSLGCML 381 (689)
T ss_dssp EECTT-------SCEEECCCTTCEECSSC------------CCCSCCSCGGGCCHHHHST---TCCCCTHHHHHHHHHHH
T ss_pred EEeCC-------CCEEecccceeeecCCC------------CCCCccCCcCccCHHHHhC---CCCCCcHHHHHHHHHHH
Confidence 99988 89999999999765431 1234579999999999964 24689999999999999
Q ss_pred HHHHhCCCCCCCC---CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1040 LELLTLQVPYMGL---SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~---~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|||++|++||.+. ...++...+..... .++ ...++++++||.+||+.||
T Consensus 382 YEmLtG~~PF~~~~~~~~~~i~~~i~~~~~-~~p---------------------------~~~S~~a~dLI~~lL~~dP 433 (689)
T 3v5w_A 382 FKLLRGHSPFRQHKTKDKHEIDRMTLTMAV-ELP---------------------------DSFSPELRSLLEGLLQRDV 433 (689)
T ss_dssp HHHHHSSCTTCGGGCCCHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHHHHHTCSCG
T ss_pred HHHHhCCCCCCCCChHHHHHHHHhhcCCCC-CCC---------------------------ccCCHHHHHHHHHHccCCH
Confidence 9999999999753 23334444333221 111 1456779999999999999
Q ss_pred CCCCC-----HHHHHHHHHhhc
Q 001143 1117 TERPT-----AGDLYEMFVART 1133 (1141)
Q Consensus 1117 ~~RPS-----a~ElL~~L~~~~ 1133 (1141)
.+|++ ++||++|+||+.
T Consensus 434 ~~Rl~~~~~ga~ei~~HpfF~~ 455 (689)
T 3v5w_A 434 NRRLGCLGRGAQEVKESPFFRS 455 (689)
T ss_dssp GGCTTCSSSTHHHHTTSGGGTT
T ss_pred hHCCCCCCCCHHHHhcCccccC
Confidence 99998 899999999974
No 20
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=4.6e-41 Score=384.54 Aligned_cols=258 Identities=24% Similarity=0.349 Sum_probs=213.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+.+|++.+.||+|+||.||+|++ .+..||+|+.... .......+. +.+|+.+++.++||||+++++++..
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~--~~~~~~~~~----~~~E~~~l~~l~hpnIv~l~~~~~~ 85 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKT--QLNPTSLQK----LFREVRIMKILNHPNIVKLFEVIET 85 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGG--GSCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhh--cCCHHHHHH----HHHHHHHHHhCCCCCEeeEEEEEEE
Confidence 4467899999999999999999998 5677888876433 223333333 4799999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.+ ..|+||||+++++|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 86 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIl 146 (328)
T 3fe3_A 86 EK--------------TLYLIMEYASGGEVFDYLVA-----HGRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLL 146 (328)
T ss_dssp SS--------------EEEEEECCCTTCBHHHHHHH-----HCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEE
T ss_pred CC--------------EEEEEEECCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEE
Confidence 55 35999999999999999976 246999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||++........ .....||+.|+|||++.+. ...+.++|||||||++|
T Consensus 147 l~~~-------~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~ 205 (328)
T 3fe3_A 147 LDAD-------MNIKIADFGFSNEFTVGGK-----------LDAFCGAPPYAAPELFQGK---KYDGPEVDVWSLGVILY 205 (328)
T ss_dssp ECTT-------SCEEECSTTCCGGGSSSCG-----------GGTTSSSGGGCCHHHHHTC---CCCSHHHHHHHHHHHHH
T ss_pred EcCC-------CCEEEeeccCceecCCCCc-----------cccccCCcceeCcccccCC---CcCCchhhhhhhHHHHH
Confidence 9887 7899999999976543211 1234699999999999862 23358999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|+.||.+.+..++...+..+.... + ...++++.+|+.+||..||.+||
T Consensus 206 ell~g~~pf~~~~~~~~~~~i~~~~~~~-p---------------------------~~~s~~~~~li~~~L~~dP~~R~ 257 (328)
T 3fe3_A 206 TLVSGSLPFDGQNLKELRERVLRGKYRI-P---------------------------FYMSTDCENLLKRFLVLNPIKRG 257 (328)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHCCCCC-C---------------------------TTSCHHHHHHHHHHCCSSTTTSC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCC-C---------------------------CCCCHHHHHHHHHHCCCChhHCc
Confidence 9999999999988888777776543321 1 03456789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
|++|+++|+|+...
T Consensus 258 t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 258 TLEQIMKDRWINAG 271 (328)
T ss_dssp CHHHHTTCTTTTTT
T ss_pred CHHHHhcCHhhcCC
Confidence 99999999999753
No 21
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.7e-41 Score=378.99 Aligned_cols=259 Identities=25% Similarity=0.434 Sum_probs=211.8
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.++||+|+||+||+|.+ .+..||+|+...... . ..+ .+.+|+.++++++||||+++++++...+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~--~~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 90 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--P--KKE----LIINEILVMRENKNPNIVNYLDSYLVGD 90 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC--S--CHH----HHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc--c--HHH----HHHHHHHHHhcCCCCCCCeEeEEEEECC
Confidence 45799999999999999999987 466788887654422 1 112 2378999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 91 --------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~ 150 (297)
T 3fxz_A 91 --------------ELWVVMEYLAGGSLTDVVTE------TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG 150 (297)
T ss_dssp --------------EEEEEEECCTTCBHHHHHHH------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEECCCCCCHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC
Confidence 34999999999999999976 2589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 151 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el 209 (297)
T 3fxz_A 151 MD-------GSVKLTDFGFCAQITPEQS----------KRSTMVGTPYWMAPEVVTR----KAYGPKVDIWSLGIMAIEM 209 (297)
T ss_dssp TT-------CCEEECCCTTCEECCSTTC----------CBCCCCSCGGGCCHHHHHC----SCBCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeCCCceecCCccc----------ccCCccCCcCccChhhhcC----CCCCcHHHHHHHHHHHHHH
Confidence 87 7899999999876543211 1224569999999999986 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||.+.........+.....+.... ....+..+.+++.+||+.||.+|||+
T Consensus 210 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~l~~dp~~Rps~ 264 (297)
T 3fxz_A 210 IEGEPPYLNENPLRALYLIATNGTPELQN-------------------------PEKLSAIFRDFLNRCLEMDVEKRGSA 264 (297)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHHCSCCCSC-------------------------GGGSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCCC-------------------------ccccCHHHHHHHHHHccCChhHCcCH
Confidence 99999998877766555543333222110 11456679999999999999999999
Q ss_pred HHHHHHHHhhcCCCC
Q 001143 1123 GDLYEMFVARTSSSI 1137 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s~~ 1137 (1141)
.|+++|+|++.....
T Consensus 265 ~ell~h~~~~~~~~~ 279 (297)
T 3fxz_A 265 KELLQHQFLKIAKPL 279 (297)
T ss_dssp HHHTTCGGGGGCCCG
T ss_pred HHHhhChhhcccCcc
Confidence 999999999876544
No 22
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.5e-40 Score=385.33 Aligned_cols=265 Identities=22% Similarity=0.269 Sum_probs=212.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+.|++.+.||+|+||.||+|++. +..+|+|+........... ......+.+|+.++++++||||+++++++.+..
T Consensus 12 ~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~- 88 (361)
T 2yab_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR--GVCREEIEREVSILRQVLHPNIITLHDVYENRT- 88 (361)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSS--SBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred hceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccc--hhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC-
Confidence 45999999999999999999985 6678888865433221110 011123479999999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 89 -------------~~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~ 150 (361)
T 2yab_A 89 -------------DVVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150 (361)
T ss_dssp -------------EEEEEEECCCSCBHHHHHTT-----CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred -------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeC
Confidence 35999999999999999864 347999999999999999999999999999999999999976
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
++. ....+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 151 ~~~---~~~~vkl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslGvil~~ll 212 (361)
T 2yab_A 151 KNI---PIPHIKLIDFGLAHEIEDGV-----------EFKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYILL 212 (361)
T ss_dssp TTS---SSCCEEECCCSSCEECCTTC-----------CCCCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CCC---CccCEEEEecCCceEcCCCC-----------ccccCCCCccEECchHHcC----CCCCccccHHHHHHHHHHHH
Confidence 520 11279999999997654321 1123469999999999876 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||.+.+..+....+..+........ ....+..+.+||.+||..||.+|||+.
T Consensus 213 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dP~~R~t~~ 268 (361)
T 2yab_A 213 SGASPFLGDTKQETLANITAVSYDFDEEF------------------------FSQTSELAKDFIRKLLVKETRKRLTIQ 268 (361)
T ss_dssp HSCCSSCCSSHHHHHHHHHTTCCCCCHHH------------------------HTTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHhcCCCCCchh------------------------ccCCCHHHHHHHHHHCCCChhHCcCHH
Confidence 99999998888887777765543221111 114566799999999999999999999
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
|+++|+|+..
T Consensus 269 e~l~hp~~~~ 278 (361)
T 2yab_A 269 EALRHPWITP 278 (361)
T ss_dssp HHHTSTTTSC
T ss_pred HHhcCcCcCC
Confidence 9999999974
No 23
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=381.15 Aligned_cols=257 Identities=21% Similarity=0.291 Sum_probs=204.5
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||+||+|.+ .+..||+|+...... . ...+ ++.+|+.++++++||||+++++++.+.+
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~--~-~~~~----~~~~Ei~~l~~l~hpnIv~l~~~~~~~~ 81 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--G-SDLP----RIKTEIEALKNLRHQHICQLYHVLETAN 81 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC------CC----HHHHHHHHHHTCCCTTBCCEEEEEECSS
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEcccc--c-hHHH----HHHHHHHHHHhCCCCCEeeEEEEEEeCC
Confidence 46799999999999999999998 567788887643321 1 1222 3479999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 82 --------------~~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~ 142 (347)
T 3zgw_A 82 --------------KIFMVLEYCPGGELFDYIIS-----QDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFD 142 (347)
T ss_dssp --------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC
T ss_pred --------------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEc
Confidence 35999999999999999976 24699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++........ .......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 143 ~~-------~~~kL~DFG~a~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlG~il~el 203 (347)
T 3zgw_A 143 EY-------HKLKLIDFGLCAKPKGNKD---------YHLQTCCGSLAYAAPELIQG---KSYLGSEADVWSMGILLYVL 203 (347)
T ss_dssp TT-------SCEEECCCTTCBC-----------------------CGGGCCHHHHTT---C---CCHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEeccCcccccCCCC---------ccccccCCccCccCHHHHcC---CCCCCcHhHHHHHHHHHHHH
Confidence 87 7899999999875432211 11234569999999999986 22348999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|..||.+.+..+....+..+..... ...++.+.+|+.+||+.||.+|||+
T Consensus 204 l~g~~Pf~~~~~~~~~~~i~~~~~~~p----------------------------~~~s~~~~~li~~~L~~dP~~Rps~ 255 (347)
T 3zgw_A 204 MCGFLPFDDDNVMALYKKIMRGKYDVP----------------------------KWLSPSSILLLQQMLQVDPKKRISM 255 (347)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHTCCCCC----------------------------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HHCCCCCCCCCHHHHHHHHHcCCCCCC----------------------------CCCCHHHHHHHHHHcccCHhHCcCH
Confidence 999999998888877777765443211 0345568899999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001143 1123 GDLYEMFVARTS 1134 (1141)
Q Consensus 1123 ~ElL~~L~~~~~ 1134 (1141)
.|+++|+|+...
T Consensus 256 ~eil~hp~~~~~ 267 (347)
T 3zgw_A 256 KNLLNHPWIMQD 267 (347)
T ss_dssp HHHHTCHHHHTT
T ss_pred HHHhcCcchhcC
Confidence 999999999753
No 24
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=382.82 Aligned_cols=259 Identities=24% Similarity=0.299 Sum_probs=207.8
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~ 878 (1141)
...+++|++.++||+|+||.||+|++. +..+|+|+.+... .........+.+|..++..+ +||||+++++++
T Consensus 19 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~-----~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~ 93 (353)
T 3txo_A 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDV-----ILQDDDVECTMTEKRILSLARNHPFLTQLFCCF 93 (353)
T ss_dssp ----CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE
T ss_pred CCchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHH-----hcchhHHHHHHHHHHHHHhccCCCceeeEEEEE
Confidence 456789999999999999999999985 5678888865321 11111123347899999988 699999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.. ..|+||||++||+|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 94 ~~~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N 154 (353)
T 3txo_A 94 QTPD--------------RLFFVMEFVNGGDLMFHIQK-----SRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDN 154 (353)
T ss_dssp ECSS--------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred EeCC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHH
Confidence 8755 35999999999999999976 2469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||+|+...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 155 ILl~~~-------g~ikL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 213 (353)
T 3txo_A 155 VLLDHE-------GHCKLADFGMCKEGICNG----------VTTATFCGTPDYIAPEILQE----MLYGPAVDWWAMGVL 213 (353)
T ss_dssp EEECTT-------SCEEECCCTTCBCSCC-------------------CCGGGCCHHHHHH----HHCTTHHHHHHHHHH
T ss_pred EEECCC-------CCEEEccccceeecccCC----------ccccccCCCcCeEChhhcCC----CCcCCccCCCcchHH
Confidence 999987 889999999997532211 11224579999999999986 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|||++|+.||.+.+..++...+....... + ...+..+.++|.+||+.||.+
T Consensus 214 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~~-p---------------------------~~~~~~~~~li~~lL~~dP~~ 265 (353)
T 3txo_A 214 LYEMLCGHAPFEAENEDDLFEAILNDEVVY-P---------------------------TWLHEDATGILKSFMTKNPTM 265 (353)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-C---------------------------TTSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHcCCCCC-C---------------------------CCCCHHHHHHHHHHhhhCHHH
Confidence 999999999999988888888776543211 1 034556899999999999999
Q ss_pred CCCH------HHHHHHHHhhc
Q 001143 1119 RPTA------GDLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa------~ElL~~L~~~~ 1133 (1141)
||++ .|+++|+||..
T Consensus 266 R~~~~~~~~~~~il~hp~f~~ 286 (353)
T 3txo_A 266 RLGSLTQGGEHAILRHPFFKE 286 (353)
T ss_dssp STTSGGGTCTHHHHTSGGGTT
T ss_pred ccCCcccCCHHHHhhCCcccC
Confidence 9999 99999999974
No 25
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.9e-40 Score=377.52 Aligned_cols=257 Identities=23% Similarity=0.315 Sum_probs=210.6
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
++++|++.+.||+|+||.||+|++. +..+|+|+...... ........+.+|+.++++++||||+++++++.+.
T Consensus 3 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~ 77 (337)
T 1o6l_A 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVI-----IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTH 77 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECS
T ss_pred ChHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHh-----hhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeC
Confidence 4678999999999999999999984 66788887643211 0111122347899999999999999999999875
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+ ..|+||||++||+|..++.. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 78 ~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll 138 (337)
T 1o6l_A 78 D--------------RLCFVMEYANGGELFFHLSR-----ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138 (337)
T ss_dssp S--------------EEEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE
T ss_pred C--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE
Confidence 5 35999999999999999976 2469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++||
T Consensus 139 ~~~-------g~vkL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~e 197 (337)
T 1o6l_A 139 DKD-------GHIKITDFGLCKEGISDGA----------TMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYE 197 (337)
T ss_dssp CTT-------SCEEECCCTTCBCSCCTTC----------CBCCCEECGGGCCGGGGSS----SCBCTTHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeeccchhhcccCCC----------cccccccChhhCChhhhcC----CCCCchhhcccchhHHHH
Confidence 987 8899999999975322111 1224569999999999876 567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP- 1120 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP- 1120 (1141)
|++|+.||.+.+..++...+...... ++ ...++++.++|.+||+.||.+||
T Consensus 198 ll~g~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~dP~~R~g 249 (337)
T 1o6l_A 198 MMCGRLPFYNQDHERLFELILMEEIR-FP---------------------------RTLSPEAKSLLAGLLKKDPKQRLG 249 (337)
T ss_dssp HHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHTCSSTTTSTT
T ss_pred HhcCCCCCCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHHHhcC
Confidence 99999999988877777766543221 11 13456799999999999999999
Q ss_pred ----CHHHHHHHHHhhc
Q 001143 1121 ----TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 ----Sa~ElL~~L~~~~ 1133 (1141)
++.|+++|+||..
T Consensus 250 ~~~~~~~ei~~h~~f~~ 266 (337)
T 1o6l_A 250 GGPSDAKEVMEHRFFLS 266 (337)
T ss_dssp CSTTTHHHHHTSGGGTT
T ss_pred CCCCCHHHHHcCCCcCC
Confidence 9999999999964
No 26
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.9e-40 Score=375.29 Aligned_cols=259 Identities=21% Similarity=0.277 Sum_probs=211.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||+|+||.||+|.+. +..+|+|+.... ...... +.+|+.+++.++||||+++++++.+..
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-----~~~~~~----~~~E~~~l~~l~hpnIv~~~~~~~~~~ 74 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-----GTDQVL----VKKEISILNIARHRNILHLHESFESME 74 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-----THHHHH----HHHHHHHHHHSCCTTBCCEEEEEEETT
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-----cccHHH----HHHHHHHHHhCCCCCCCeEeEEEecCC
Confidence 467999999999999999999985 456777765422 222233 379999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||++|++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 75 --------------~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~ 136 (321)
T 1tki_A 75 --------------ELVMIFEFISGLDIFERINT----SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQ 136 (321)
T ss_dssp --------------EEEEEECCCCCCBHHHHHTS----SSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred --------------EEEEEEEeCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc
Confidence 35999999999999999864 234699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+. .+.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 137 ~~~-----~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l 196 (321)
T 1tki_A 137 TRR-----SSTIKIIEFGQARQLKPGDN-----------FRLLFTAPEYYAPEVHQH----DVVSTATDMWSLGTLVYVL 196 (321)
T ss_dssp SSS-----CCCEEECCCTTCEECCTTCE-----------EEEEESCGGGSCHHHHTT----CEECHHHHHHHHHHHHHHH
T ss_pred cCC-----CCCEEEEECCCCeECCCCCc-----------cccccCChhhcCcHHhcC----CCCCchhhHHHHHHHHHHH
Confidence 631 17899999999976543211 123468999999999976 4578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|..||.+....+....+...........+ ...+.++.+++.+||..||.+|||+
T Consensus 197 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~Rpt~ 252 (321)
T 1tki_A 197 LSGINPFLAETNQQIIENIMNAEYTFDEEAF------------------------KEISIEAMDFVDRLLVKERKSRMTA 252 (321)
T ss_dssp HHSSCTTCCSSHHHHHHHHHHTCCCCCHHHH------------------------TTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HhCCCCCcCCCHHHHHHHHHcCCCCCChhhh------------------------ccCCHHHHHHHHHHcCCChhHCcCH
Confidence 9999999988888877777655443222111 1456779999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001143 1123 GDLYEMFVARTS 1134 (1141)
Q Consensus 1123 ~ElL~~L~~~~~ 1134 (1141)
.|+++|+|+...
T Consensus 253 ~e~l~hp~~~~~ 264 (321)
T 1tki_A 253 SEALQHPWLKQK 264 (321)
T ss_dssp HHHHHSHHHHSC
T ss_pred HHHhcChhhccC
Confidence 999999999754
No 27
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=7.6e-40 Score=366.04 Aligned_cols=284 Identities=19% Similarity=0.242 Sum_probs=206.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+++|++.++||+|+||+||+|.+. +..+|+|+..... ......+. +.+|+.++++++||||+++++++.+..
T Consensus 1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~ 74 (292)
T 3o0g_A 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDD--DDEGVPSS----ALREICLLKELKHKNIVRLHDVLHSDK 74 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSC--SSTTHHHH----HHHHHHHHTTCCCTTBCCEEEEEEETT
T ss_pred CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccC--CcCCcchH----HHHHHHHHhcCCCCCEeeEEeEEEeCC
Confidence 468999999999999999999984 5668888765443 22222233 379999999999999999999998755
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||++ ++|.+.+.. ....+++..++.++.||+.||+|||++||+||||||+|||++
T Consensus 75 --------------~~~lv~e~~~-~~l~~~~~~----~~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~ 135 (292)
T 3o0g_A 75 --------------KLTLVFEFCD-QDLKKYFDS----CNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135 (292)
T ss_dssp --------------EEEEEEECCS-EEHHHHHHH----TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEecCC-CCHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc
Confidence 3499999998 567666654 234699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 136 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l 195 (292)
T 3o0g_A 136 RN-------GELKLANFGLARAFGIPVR----------CYSAEVVTLWYRPPDVLFG---AKLYSTSIDMWSAGCIFAEL 195 (292)
T ss_dssp TT-------SCEEECCCTTCEECCSCCS----------CCCSCCSCGGGCCHHHHTT---CSCCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeecccceecCCccc----------cccCCccccCCcChHHHcC---CCCcCchHHHHHHHHHHHHH
Confidence 87 7899999999976543211 1224468999999999876 23478999999999999999
Q ss_pred HhCCCC-CCCCCHHHHHHHHHhCCCCCchhHHhhhccCc-cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1043 LTLQVP-YMGLSELEIHDLIQMGKRPRLTDELEALGSCH-EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1043 LTGk~P-f~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
++|..| |.+.+..+....+...........+....... ....................+..+.+|+.+||+.||++||
T Consensus 196 ~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 275 (292)
T 3o0g_A 196 ANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRI 275 (292)
T ss_dssp TTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred HHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCC
Confidence 998777 45555555555542211111111111000000 0000000000011111225677899999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001143 1121 TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~ 1133 (1141)
|++|+++|+||..
T Consensus 276 t~~e~l~hp~f~~ 288 (292)
T 3o0g_A 276 SAEEALQHPYFSD 288 (292)
T ss_dssp CHHHHHTSGGGTT
T ss_pred CHHHHhcCccccc
Confidence 9999999999975
No 28
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=8.6e-40 Score=378.90 Aligned_cols=260 Identities=25% Similarity=0.312 Sum_probs=212.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|.+. +..+|+|+.... .......+. +.+|+.++++++||||+++++++.+..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~--~~~~~~~~~----~~~E~~il~~l~hpnIv~~~~~~~~~~- 101 (362)
T 2bdw_A 29 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTK--KLSARDFQK----LEREARICRKLQHPNIVRLHDSIQEES- 101 (362)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETT--TCCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred cCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcc--cCCHHHHHH----HHHHHHHHHhCCCCCCCeEEEEEEeCC-
Confidence 46999999999999999999985 567888876533 223333333 489999999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..|+||||++|++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 102 -------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~ 163 (362)
T 2bdw_A 102 -------------FHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 163 (362)
T ss_dssp -------------EEEEEECCCCSCBHHHHHTT-----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESC
T ss_pred -------------EEEEEEecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEec
Confidence 34999999999999999864 346999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+. ..+.+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 164 ~~----~~~~~kl~DfG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~ll 224 (362)
T 2bdw_A 164 KA----KGAAVKLADFGLAIEVNDSE-----------AWHGFAGTPGYLSPEVLKK----DPYSKPVDIWACGVILYILL 224 (362)
T ss_dssp SS----TTCCEEECCCTTCBCCTTCC-----------SCCCSCSCTTTCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CC----CCCCEEEeecCcceEecCCc-----------ccccCCCCccccCHHHHcc----CCCCchhhHHHHHHHHHHHH
Confidence 52 12569999999997654321 1123569999999999976 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||.+.+..++...+..+........+ ...++++.+||.+||+.||.+|||+.
T Consensus 225 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~R~t~~ 280 (362)
T 2bdw_A 225 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEW------------------------DTVTPEAKSLIDSMLTVNPKKRITAD 280 (362)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCCCTTGG------------------------GGSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHhCCCCCCcccc------------------------cCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 999999988887777777655432111100 14567799999999999999999999
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
|+++|+|+..
T Consensus 281 e~l~hp~~~~ 290 (362)
T 2bdw_A 281 QALKVPWICN 290 (362)
T ss_dssp HHTTSHHHHT
T ss_pred HHhcCcccCC
Confidence 9999999864
No 29
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=6.7e-40 Score=371.13 Aligned_cols=287 Identities=19% Similarity=0.248 Sum_probs=208.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.-.++|++.++||+|+||+||+|++ .+..+|+|+..... ... .....+.+|+.++++++||||+++++++.+.
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~ 91 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDA--EDE----GIPSTAIREISLLKELHHPNIVSLIDVIHSE 91 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCS
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEeccc--ccc----hhhHHHHHHHHHHHHcCCCCEeeeeeEEccC
Confidence 4467899999999999999999998 46678888765332 111 1223347999999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. .++||||++ ++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 92 ~~--------------~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~ 152 (311)
T 3niz_A 92 RC--------------LTLVFEFME-KDLKKVLDE----NKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI 152 (311)
T ss_dssp SC--------------EEEEEECCS-EEHHHHHHT----CTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred CE--------------EEEEEcCCC-CCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE
Confidence 53 499999998 588888865 23469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+++....... ......||+.|+|||++.+ ...++.++|||||||++|+
T Consensus 153 ~~~-------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~ 212 (311)
T 3niz_A 153 NSD-------GALKLADFGLARAFGIPVR----------SYTHEVVTLWYRAPDVLMG---SKKYSTSVDIWSIGCIFAE 212 (311)
T ss_dssp CTT-------CCEEECCCTTCEETTSCCC-------------CCCCCCTTCCHHHHTT---CCSCCTHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEccCcCceecCCCcc----------cccCCcccCCcCCHHHhcC---CCCCCchHHhHHHHHHHHH
Confidence 887 7899999999976543211 1123468999999999875 2457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCcc--ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHE--HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|++|+.||.+....+....+.. ...+. +..+........ ...................++++.+||.+||+.||.+
T Consensus 213 ll~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 291 (311)
T 3niz_A 213 MITGKPLFPGVTDDDQLPKIFSILGTPN-PREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNK 291 (311)
T ss_dssp HHHSSCSCCCSSTTTHHHHHHHHHCCCC-TTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTT
T ss_pred HHhCCCCCCCCChHHHHHHHHHHHCCCC-hHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhH
Confidence 9999999987665554444422 11111 111110000000 0000000000001112245678999999999999999
Q ss_pred CCCHHHHHHHHHhhcCC
Q 001143 1119 RPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~s 1135 (1141)
|||++|+++|+||+.-.
T Consensus 292 Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 292 RISARDAMNHPYFKDLD 308 (311)
T ss_dssp SCCHHHHHTSGGGTTSC
T ss_pred CCCHHHHhcCcccccCC
Confidence 99999999999998643
No 30
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.3e-39 Score=368.90 Aligned_cols=261 Identities=28% Similarity=0.460 Sum_probs=204.7
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
....+|++.++||+|+||+||+|++.+..+|+|+.... .......+.+ .+|+.++++++||||+++++++.+..
T Consensus 34 i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~hp~iv~~~~~~~~~~ 107 (309)
T 3p86_A 34 IPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQ--DFHAERVNEF----LREVAIMKRLRHPNIVLFMGAVTQPP 107 (309)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCC--CCSHHHHHHH----HHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred CChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCC--CCCHHHHHHH----HHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 44678999999999999999999999999999986533 2233333444 89999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCCee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL 960 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g--IvHrDLKP~NIL 960 (1141)
.+ ++||||+++++|.+++..... ...+++..++.++.||+.||+|||++| |+||||||+|||
T Consensus 108 ~~--------------~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIl 171 (309)
T 3p86_A 108 NL--------------SIVTEYLSRGSLYRLLHKSGA--REQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLL 171 (309)
T ss_dssp CC--------------EEEEECCTTCBHHHHHHSTTH--HHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEE
T ss_pred ce--------------EEEEecCCCCcHHHHHhhcCC--CCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEE
Confidence 43 999999999999999975211 124999999999999999999999999 999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 172 l~~~-------~~~kL~Dfg~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ 230 (309)
T 3p86_A 172 VDKK-------YTVKVCDFGLSRLKASTF----------LSSKSAAGTPEWMAPEVLRD----EPSNEKSDVYSFGVILW 230 (309)
T ss_dssp ECTT-------CCEEECCCC---------------------------CCTTSCHHHHTT----CCCCTTHHHHHHHHHHH
T ss_pred EeCC-------CcEEECCCCCCccccccc----------cccccCCCCccccChhhhcC----CCCCchhhHHHHHHHHH
Confidence 9887 789999999997543211 11224569999999999986 56789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|++|+.||.+....+....+... ....++ ...++.+.+||.+||+.||.+|
T Consensus 231 elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dP~~R 283 (309)
T 3p86_A 231 ELATLQQPWGNLNPAQVVAAVGFKCKRLEIP---------------------------RNLNPQVAAIIEGCWTNEPWKR 283 (309)
T ss_dssp HHHHCCCTTTTSCHHHHHHHHHHSCCCCCCC---------------------------TTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhcCCCCCCC---------------------------ccCCHHHHHHHHHHccCChhhC
Confidence 999999999988877766655322 211111 1455679999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
||+.++++.+....
T Consensus 284 ps~~~ll~~L~~~~ 297 (309)
T 3p86_A 284 PSFATIMDLLRPLI 297 (309)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHH
Confidence 99999999876554
No 31
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=388.11 Aligned_cols=261 Identities=25% Similarity=0.311 Sum_probs=210.5
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||+||+|.+. +..+|+|+...+ .......+. +.+|+.++++++||||+++++++.+.+
T Consensus 11 ~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~--~~~~~~~~~----~~~E~~il~~l~hpnIv~l~~~~~~~~- 83 (444)
T 3soa_A 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTK--KLSARDHQK----LEREARICRLLKHPNIVRLHDSISEEG- 83 (444)
T ss_dssp HHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESC--SCHHHHHHH----HHHHHHHHHHCCBTTBCCEEEEEECSS-
T ss_pred CCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcc--cCCHHHHHH----HHHHHHHHHhCCCcCCCeEEEEEEECC-
Confidence 46999999999999999999984 566777775433 222222333 489999999999999999999998765
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||++||+|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 84 -------------~~~lv~E~~~gg~L~~~i~~-----~~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~ 145 (444)
T 3soa_A 84 -------------HHYLIFDLVTGGELFEDIVA-----REYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLAS 145 (444)
T ss_dssp -------------EEEEEECCCBCCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESB
T ss_pred -------------EEEEEEEeCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEec
Confidence 34999999999999999976 346999999999999999999999999999999999999985
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+. ..+.+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 146 ~~----~~~~vkL~DFG~a~~~~~~~~----------~~~~~~gt~~Y~APE~l~~----~~~~~~~DIwSlGvilyell 207 (444)
T 3soa_A 146 KL----KGAAVKLADFGLAIEVEGEQQ----------AWFGFAGTPGYLSPEVLRK----DPYGKPVDLWACGVILYILL 207 (444)
T ss_dssp SS----TTCCEEECCCSSCBCCCTTCC----------BCCCSCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHHH
T ss_pred cC----CCCcEEEccCceeEEecCCCc----------eeecccCCcccCCHHHhcC----CCCCCccccHHHHHHHHHHH
Confidence 31 126899999999976543211 1123569999999999976 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||.+.+..++...+..+........+ ...++++.+||.+||+.||.+|||+.
T Consensus 208 ~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dP~~Rpta~ 263 (444)
T 3soa_A 208 VGYPPFWDEDQHRLYQQIKAGAYDFPSPEW------------------------DTVTPEAKDLINKMLTINPSKRITAA 263 (444)
T ss_dssp HSSCSCCCSSHHHHHHHHHHTCCCCCTTTT------------------------TTSCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred hCCCCCCCccHHHHHHHHHhCCCCCCcccc------------------------ccCCHHHHHHHHHHcCCChhHCCCHH
Confidence 999999988888888777665432211100 14566799999999999999999999
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
|+++|+|+..
T Consensus 264 e~L~hp~~~~ 273 (444)
T 3soa_A 264 EALKHPWISH 273 (444)
T ss_dssp HHHHSCTTHH
T ss_pred HHhcCccccC
Confidence 9999999864
No 32
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=9.5e-40 Score=372.02 Aligned_cols=255 Identities=24% Similarity=0.325 Sum_probs=211.0
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
.++++|++.+.||+|+||.||+|++. +..+|+|+...... ........+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-----~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~ 77 (318)
T 1fot_A 3 YSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIV-----VRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD 77 (318)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC
T ss_pred CChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe
Confidence 45788999999999999999999984 66788888643210 011112234789999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..|+||||++||+|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||
T Consensus 78 ~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIl 138 (318)
T 1fot_A 78 AQ--------------QIFMIMDYIEGGELFSLLRK-----SQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENIL 138 (318)
T ss_dssp SS--------------EEEEEECCCCSCBHHHHHHH-----TSSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEE
T ss_pred CC--------------EEEEEEeCCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEE
Confidence 55 35999999999999999986 346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++|
T Consensus 139 l~~~-------g~~kL~Dfg~a~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ 194 (318)
T 1fot_A 139 LDKN-------GHIKITDFGFAKYVPDV-------------TYTLCGTPDYIAPEVVST----KPYNKSIDWWSFGILIY 194 (318)
T ss_dssp ECTT-------SCEEECCCSSCEECSSC-------------BCCCCSCTTTCCHHHHTT----CCBCTTHHHHHHHHHHH
T ss_pred EcCC-------CCEEEeecCcceecCCc-------------cccccCCccccCHhHhcC----CCCCcccchhhhHHHHH
Confidence 9887 88999999999764321 123469999999999976 56889999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
||++|+.||.+.+..+....+...... ++ ...+.++.++|.+||..||.+||
T Consensus 195 ell~g~~pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~lL~~dp~~R~ 246 (318)
T 1fot_A 195 EMLAGYTPFYDSNTMKTYEKILNAELR-FP---------------------------PFFNEDVKDLLSRLITRDLSQRL 246 (318)
T ss_dssp HHHHSSCTTCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHTCSCTTTCT
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------CCCCHHHHHHHHHHhccCHHHcC
Confidence 999999999988877777766544321 11 03456799999999999999999
Q ss_pred -----CHHHHHHHHHhhc
Q 001143 1121 -----TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 -----Sa~ElL~~L~~~~ 1133 (1141)
+++++++|+|+..
T Consensus 247 ~~~~~~~~~i~~hp~f~~ 264 (318)
T 1fot_A 247 GNLQNGTEDVKNHPWFKE 264 (318)
T ss_dssp TSSTTTTHHHHTSGGGSS
T ss_pred CCcCCCHHHHhcCccccC
Confidence 9999999999964
No 33
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=9.3e-40 Score=372.81 Aligned_cols=260 Identities=25% Similarity=0.274 Sum_probs=203.6
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~-----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
....++|++.+.||+|+||.||+|++ .+..+|+|+.+............ .+.+|+.++++++||||+++++
T Consensus 13 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~----~~~~E~~~l~~l~hp~iv~~~~ 88 (327)
T 3a62_A 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTA----HTKAERNILEEVKHPFIVDLIY 88 (327)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC------------------HHHHHHHCCCTTBCCEEE
T ss_pred CCCHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHH----HHHHHHHHHHhCCCCCccceeE
Confidence 34567899999999999999999997 45678888764322111111222 2378999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
++...+. .|+||||++|++|.+++.. ...+++..+..++.||+.||.|||++||+||||||
T Consensus 89 ~~~~~~~--------------~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp 149 (327)
T 3a62_A 89 AFQTGGK--------------LYLILEYLSGGELFMQLER-----EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKP 149 (327)
T ss_dssp EEECSSC--------------EEEEEECCTTEEHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCT
T ss_pred EEEcCCE--------------EEEEEeCCCCCcHHHHHHh-----CCCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCH
Confidence 9987553 4999999999999999976 24689999999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
+|||++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++||||||
T Consensus 150 ~Nill~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG 208 (327)
T 3a62_A 150 ENIMLNHQ-------GHVKLTDFGLCKESIHDGT----------VTHTFCGTIEYMAPEILMR----SGHNRAVDWWSLG 208 (327)
T ss_dssp TTEEECTT-------SCEEECCCSCC--------------------CTTSSCCTTSCHHHHTT----SCCCTHHHHHHHH
T ss_pred HHeEECCC-------CcEEEEeCCcccccccCCc----------cccccCCCcCccCHhhCcC----CCCCCcccchhHH
Confidence 99999887 7899999999875332111 1124469999999999976 5678999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1037 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|++|+|++|+.||.+.+..+....+...... ++ ...+..+.++|.+||+.||
T Consensus 209 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~L~~dp 260 (327)
T 3a62_A 209 ALMYDMLTGAPPFTGENRKKTIDKILKCKLN-LP---------------------------PYLTQEARDLLKKLLKRNA 260 (327)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC-CC---------------------------TTSCHHHHHHHHHHSCSCG
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------CCCCHHHHHHHHHHHhcCH
Confidence 9999999999999988777777666543321 11 1345679999999999999
Q ss_pred CCCC-----CHHHHHHHHHhhc
Q 001143 1117 TERP-----TAGDLYEMFVART 1133 (1141)
Q Consensus 1117 ~~RP-----Sa~ElL~~L~~~~ 1133 (1141)
.+|| ++.|+++|+|+..
T Consensus 261 ~~R~~~~~~~~~e~l~hp~f~~ 282 (327)
T 3a62_A 261 ASRLGAGPGDAGEVQAHPFFRH 282 (327)
T ss_dssp GGSTTSSTTTHHHHHHSGGGSS
T ss_pred hhccCCCCCCHHHHHcCCcccC
Confidence 9999 8999999999964
No 34
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.1e-40 Score=372.72 Aligned_cols=264 Identities=22% Similarity=0.290 Sum_probs=211.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCCh--HHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSA--DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~--~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
+.|++.+.||+|+||.||+|.+. +..+|+|+.......... ...+ .+.+|+.++++++||||+++++++.+.
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~ 86 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSRE----DIEREVSILKEIQHPNVITLHEVYENK 86 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHH----HHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHH----HHHHHHHHHHhCCCCCCCcEEEEEEeC
Confidence 35899999999999999999985 667888876543322111 1122 347999999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 87 ~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll 147 (326)
T 2y0a_A 87 T--------------DVILILELVAGGELFDFLAE-----KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147 (326)
T ss_dssp S--------------EEEEEEECCCSCBHHHHHTT-----SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred C--------------EEEEEEEcCCCCCHHHHHHh-----cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEE
Confidence 4 35999999999999999864 3469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.++. ....+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 148 ~~~~~---~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~ 209 (326)
T 2y0a_A 148 LDRNV---PKPRIKIIDFGLAHKIDFGN-----------EFKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYI 209 (326)
T ss_dssp SCSSS---SSCCEEECCCTTCEECCTTS-----------CCCCCCSCTTTCCHHHHTT----CCCCTHHHHHHHHHHHHH
T ss_pred ecCCC---CCCCEEEEECCCCeECCCCC-----------ccccccCCcCcCCceeecC----CCCCcHHHHHHHHHHHHH
Confidence 87620 11379999999997654321 1123469999999999875 568899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|++|..||.+....+....+........... ....+..+.+||.+||+.||.+|||
T Consensus 210 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~L~~dP~~Rpt 265 (326)
T 2y0a_A 210 LLSGASPFLGDTKQETLANVSAVNYEFEDEY------------------------FSNTSALAKDFIRRLLVKDPKKRMT 265 (326)
T ss_dssp HHHSCCSSCCSSHHHHHHHHHHTCCCCCHHH------------------------HTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHHCcCCCCCCCHHHHHHHHHhcCCCcCccc------------------------cccCCHHHHHHHHHHccCChhhCCC
Confidence 9999999998877777666654433221111 1145667999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
+.|+++|+|+...
T Consensus 266 ~~e~l~hp~~~~~ 278 (326)
T 2y0a_A 266 IQDSLQHPWIKPK 278 (326)
T ss_dssp HHHHHHSTTTSCC
T ss_pred HHHHhcCCCccCC
Confidence 9999999999743
No 35
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=1.4e-39 Score=361.16 Aligned_cols=259 Identities=25% Similarity=0.285 Sum_probs=209.5
Q ss_pred CCCCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+++|++.+.||+|+||.||+|.+.. ..+|+|+.... ..........+.+|+.++++++||||+++++++.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 80 (279)
T 3fdn_A 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKA-----QLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD 80 (279)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHH-----HHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC
T ss_pred eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEecc-----ccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec
Confidence 457789999999999999999999854 45788875422 11222233456899999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+
T Consensus 81 ~~--------------~~~lv~e~~~~~~l~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nil 141 (279)
T 3fdn_A 81 AT--------------RVYLILEYAPLGTVYRELQKL-----SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLL 141 (279)
T ss_dssp SS--------------EEEEEECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEE
T ss_pred CC--------------EEEEEEecCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEE
Confidence 54 359999999999999999762 46999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||++....... .....||+.|+|||++.+ ..++.++||||||+++|
T Consensus 142 i~~~-------~~~~l~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~ 198 (279)
T 3fdn_A 142 LGSA-------GELKIADFGWSVHAPSSR------------RTDLCGTLDYLPPEMIEG----RMHDEKVDLWSLGVLCY 198 (279)
T ss_dssp ECTT-------SCEEECSCCEESCC--------------------CCCCTTCCHHHHTT----CCCCTTHHHHHHHHHHH
T ss_pred EcCC-------CCEEEEeccccccCCccc------------ccccCCCCCccCHhHhcc----CCCCccchhHhHHHHHH
Confidence 9887 789999999885433211 123468999999999876 56789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|..||......+....+....... + ...+..+.+|+.+||+.||.+||
T Consensus 199 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~li~~~l~~~p~~Rp 250 (279)
T 3fdn_A 199 EFLVGKPPFEANTYQETYKRISRVEFTF-P---------------------------DFVTEGARDLISRLLKHNPSQRP 250 (279)
T ss_dssp HHHHSSCTTCCSSHHHHHHHHHHTCCCC-C---------------------------TTSCHHHHHHHHHHCCSSGGGSC
T ss_pred HHHHCCCCCCCCcHHHHHHHHHhCCCCC-C---------------------------CcCCHHHHHHHHHHhccChhhCC
Confidence 9999999999877777666664433211 0 13456789999999999999999
Q ss_pred CHHHHHHHHHhhcCCC
Q 001143 1121 TAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~s~ 1136 (1141)
|+.|+++|+|+...+.
T Consensus 251 s~~e~l~h~~~~~~~~ 266 (279)
T 3fdn_A 251 MLREVLEHPWITANSS 266 (279)
T ss_dssp CHHHHHHCHHHHHHCS
T ss_pred CHHHHhhCccccCCcc
Confidence 9999999999986443
No 36
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=9.9e-40 Score=364.68 Aligned_cols=283 Identities=19% Similarity=0.240 Sum_probs=206.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+++|++.+.||+|+||+||+|++. +..+|+|+...... .. .....+.+|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~--~~----~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 74 (288)
T 1ob3_A 1 MEKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKE--DE----GIPSTTIREISILKELKHSNIVKLYDVIHTKKR 74 (288)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSG--GG----CCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSC
T ss_pred CccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEecccc--cc----ccchhHHHHHHHHHhcCCCCEeeeeeEEccCCe
Confidence 468999999999999999999984 66788887643321 11 111234789999999999999999999986553
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||++ ++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 75 --------------~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~ 135 (288)
T 1ob3_A 75 --------------LVLVFEHLD-QDLKKLLDV----CEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR 135 (288)
T ss_dssp --------------EEEEEECCS-EEHHHHHHT----STTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred --------------EEEEEEecC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcC
Confidence 499999998 599998875 2346999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 136 ~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l~ 195 (288)
T 1ob3_A 136 E-------GELKIADFGLARAFGIPVR----------KYTHEIVTLWYRAPDVLMG---SKKYSTTIDIWSVGCIFAEMV 195 (288)
T ss_dssp T-------SCEEECCTTHHHHHCC-------------------CCCTTCCHHHHTT---CCSCCTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeECccccccCcccc----------ccccccccccccCchheeC---CCCCCcHHHHHHHHHHHHHHH
Confidence 7 7899999999976542211 1123468999999999875 245789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCc-cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCH-EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
+|+.||.+.+..+....+.. ...+... .+....... ....................++++.+|+.+||+.||++|||
T Consensus 196 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 274 (288)
T 1ob3_A 196 NGTPLFPGVSEADQLMRIFRILGTPNSK-NWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRIT 274 (288)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCCCTT-TSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCC
T ss_pred hCCCCCCCCCHHHHHHHHHHHHCCCChh-hchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCC
Confidence 99999998777665554422 1111100 000000000 00000000000001111245678999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001143 1122 AGDLYEMFVART 1133 (1141)
Q Consensus 1122 a~ElL~~L~~~~ 1133 (1141)
+.|+++|+|+..
T Consensus 275 ~~e~l~hp~f~~ 286 (288)
T 1ob3_A 275 AKQALEHAYFKE 286 (288)
T ss_dssp HHHHHTSGGGGC
T ss_pred HHHHhcCcchhh
Confidence 999999999974
No 37
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.9e-39 Score=374.01 Aligned_cols=266 Identities=25% Similarity=0.313 Sum_probs=209.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCC-ChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGS-SADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+.|++.+.||+|+||+||+|.+. +..+|+|+........ .....+ .+.+|+.++++++||||+++++++.+..
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~hpnIv~~~~~~~~~~ 99 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE----DLKREASICHMLKHPHIVELLETYSSDG 99 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHH----HHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHH----HHHHHHHHHHhCCCCCCCcEEEEEEeCC
Confidence 45999999999999999999984 6778888865332110 001122 3479999999999999999999998755
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..|+||||++|++|.+++...... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 100 --------------~~~lv~e~~~g~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~ 164 (351)
T 3c0i_A 100 --------------MLYMVFEFMDGADLCFEIVKRADA-GFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 164 (351)
T ss_dssp --------------EEEEEEECCSSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------EEEEEEeCCCCCCHHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEe
Confidence 349999999999999888753322 34689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+. ....+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 165 ~~~----~~~~vkl~Dfg~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l 226 (351)
T 3c0i_A 165 SKE----NSAPVKLGGFGVAIQLGESGL----------VAGGRVGTPHFMAPEVVKR----EPYGKPVDVWGCGVILFIL 226 (351)
T ss_dssp SSS----TTCCEEECCCTTCEECCTTSC----------BCCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred cCC----CCCcEEEecCcceeEecCCCe----------eecCCcCCcCccCHHHHcC----CCCCchHhhHHHHHHHHHH
Confidence 652 124599999999976543211 1123469999999999976 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||.+. ..+....+..+.....+..+ ...+..+.+||.+||+.||++|||+
T Consensus 227 l~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dP~~R~s~ 281 (351)
T 3c0i_A 227 LSGCLPFYGT-KERLFEGIIKGKYKMNPRQW------------------------SHISESAKDLVRRMLMLDPAERITV 281 (351)
T ss_dssp HHSSCSSCSS-HHHHHHHHHHTCCCCCHHHH------------------------TTSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred HHCCCCCCCc-HHHHHHHHHcCCCCCCcccc------------------------ccCCHHHHHHHHHHCCCChhHCcCH
Confidence 9999999874 44455555444332221111 1456679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
.|+++|+|+..
T Consensus 282 ~e~l~hp~~~~ 292 (351)
T 3c0i_A 282 YEALNHPWLKE 292 (351)
T ss_dssp HHHHTSHHHHT
T ss_pred HHHhcChhhcC
Confidence 99999999974
No 38
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.9e-39 Score=358.85 Aligned_cols=265 Identities=25% Similarity=0.297 Sum_probs=213.9
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||+|+||.||+|.+. +..+|+|+..... ......+. +.+|+.++++++||||+++++++....
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~ 78 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK--LSARDFQK----LEREARICRKLQHPNIVRLHDSIQEES 78 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeeccc--CCHHHHHH----HHHHHHHHHHcCCCCcCeEEEEEEcCC
Confidence 467999999999999999999985 5678888865432 23333333 379999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 79 --------------~~~~v~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~ 139 (284)
T 3kk8_A 79 --------------FHYLVFDLVTGGELFEDIVA-----REFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLA 139 (284)
T ss_dssp --------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEES
T ss_pred --------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEe
Confidence 34999999999999998876 24699999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.++ ..+.+||+|||.+........ .....||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 140 ~~~----~~~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 200 (284)
T 3kk8_A 140 SKA----KGAAVKLADFGLAIEVNDSEA-----------WHGFAGTPGYLSPEVLKK----DPYSKPVDIWACGVILYIL 200 (284)
T ss_dssp SSS----TTCCEEECCCTTCEECCSSCB-----------CCCSCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred cCC----CCCcEEEeeceeeEEcccCcc-----------ccCCCCCcCCcCchhhcC----CCCCcccchHHHHHHHHHH
Confidence 652 124599999999976543211 123468999999999976 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|..||.+....+....+..+........ ....++.+.+++.+||+.||.+|||+
T Consensus 201 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps~ 256 (284)
T 3kk8_A 201 LVGYPPFWDEDQHRLYAQIKAGAYDYPSPE------------------------WDTVTPEAKSLIDSMLTVNPKKRITA 256 (284)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHTCCCCCTTT------------------------TTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HHCCCCCCCCchhHHHHHHHhccccCCchh------------------------hcccCHHHHHHHHHHcccChhhCCCH
Confidence 999999998887777777655443211100 01455679999999999999999999
Q ss_pred HHHHHHHHhhcCCCC
Q 001143 1123 GDLYEMFVARTSSSI 1137 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s~~ 1137 (1141)
.|+++|+|+......
T Consensus 257 ~~~l~h~~~~~~~~~ 271 (284)
T 3kk8_A 257 DQALKVPWICNRERV 271 (284)
T ss_dssp HHHTTSHHHHSCCCG
T ss_pred HHHhcCccccCChhH
Confidence 999999999865443
No 39
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.2e-39 Score=373.93 Aligned_cols=256 Identities=23% Similarity=0.289 Sum_probs=212.8
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+++|++.+.||+|+||.||+|++. +..+|+|+..... .........+.+|+.++++++||||+++++++.
T Consensus 37 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~ 111 (350)
T 1rdq_E 37 TAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK-----VVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111 (350)
T ss_dssp CCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred CCCHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHH-----hccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 355788999999999999999999984 6678888764321 111111234478999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.. ..|+||||++||+|.+++.+. ..+++..++.++.||+.||+|||++||+||||||+||
T Consensus 112 ~~~--------------~~~lv~e~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NI 172 (350)
T 1rdq_E 112 DNS--------------NLYMVMEYVAGGEMFSHLRRI-----GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENL 172 (350)
T ss_dssp CSS--------------EEEEEEECCTTCBHHHHHHHH-----CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred cCC--------------EEEEEEcCCCCCcHHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceE
Confidence 655 359999999999999999862 3699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||+++..... .....||+.|+|||++.+ ..++.++|||||||++
T Consensus 173 ll~~~-------g~~kL~DFg~a~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 228 (350)
T 1rdq_E 173 LIDQQ-------GYIQVTDFGFAKRVKGR-------------TWTLCGTPEALAPEIILS----KGYNKAVDWWALGVLI 228 (350)
T ss_dssp EECTT-------SCEEECCCTTCEECSSC-------------BCCCEECGGGCCHHHHTT----CCBCTHHHHHHHHHHH
T ss_pred EECCC-------CCEEEcccccceeccCC-------------cccccCCccccCHHHhcC----CCCCCcCCEecccHhH
Confidence 99887 88999999999765331 113469999999999986 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|..||.+.+..++...+..+... ++ ...+..+.++|.+||+.||.+|
T Consensus 229 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~lL~~dp~~R 280 (350)
T 1rdq_E 229 YEMAAGYPPFFADQPIQIYEKIVSGKVR-FP---------------------------SHFSSDLKDLLRNLLQVDLTKR 280 (350)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTCCHHHHHHHHHHSCSCTTTC
T ss_pred hHHhhCCCCCCCCCHHHHHHHHHcCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHHhc
Confidence 9999999999988888877777654321 11 0345679999999999999999
Q ss_pred CC-----HHHHHHHHHhhc
Q 001143 1120 PT-----AGDLYEMFVART 1133 (1141)
Q Consensus 1120 PS-----a~ElL~~L~~~~ 1133 (1141)
|+ ++++++|+|+..
T Consensus 281 ~~~~~~~~~ei~~h~~f~~ 299 (350)
T 1rdq_E 281 FGNLKNGVNDIKNHKWFAT 299 (350)
T ss_dssp TTSSTTTTHHHHTSGGGTT
T ss_pred cCCccCCHHHHHhCcCcCC
Confidence 98 999999999974
No 40
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1e-39 Score=376.12 Aligned_cols=259 Identities=25% Similarity=0.323 Sum_probs=209.4
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~ 878 (1141)
...+.+|++.+.||+|+||.||+|++. +..+|+|+.+.... ........+..|..++..+ +||||+++++++
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~ 87 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVV-----LMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 87 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHh-----hhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE
Confidence 345789999999999999999999985 56678887543211 0111112346899999877 899999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.. ..|+||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 88 ~~~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~N 148 (345)
T 1xjd_A 88 QTKE--------------NLFFVMEYLNGGDLMYHIQS-----CHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDN 148 (345)
T ss_dssp ECSS--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred EeCC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhh
Confidence 8755 35999999999999999986 2469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||+
T Consensus 149 Ill~~~-------g~vkL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 207 (345)
T 1xjd_A 149 ILLDKD-------GHIKIADFGMCKENMLGD----------AKTNTFCGTPDYIAPEILLG----QKYNHSVDWWSFGVL 207 (345)
T ss_dssp EEECTT-------SCEEECCCTTCBCCCCTT----------CCBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHH
T ss_pred EEECCC-------CCEEEeEChhhhhcccCC----------CcccCCCCCcccCChhhhcC----CCCCChhhhHHHHHH
Confidence 999987 889999999997532211 11234579999999999986 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|||++|+.||.+.+..++...+...... ++ ...+.++.+||.+||+.||.+
T Consensus 208 l~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~dp~~ 259 (345)
T 1xjd_A 208 LYEMLIGQSPFHGQDEEELFHSIRMDNPF-YP---------------------------RWLEKEAKDLLVKLFVREPEK 259 (345)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHSCSSGGG
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------cccCHHHHHHHHHHhcCCHhH
Confidence 99999999999988888777777554321 11 034567999999999999999
Q ss_pred CCCHH-HHHHHHHhhc
Q 001143 1119 RPTAG-DLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa~-ElL~~L~~~~ 1133 (1141)
||++. ++++|+||..
T Consensus 260 R~~~~~~i~~hp~f~~ 275 (345)
T 1xjd_A 260 RLGVRGDIRQHPLFRE 275 (345)
T ss_dssp SBTTBSCGGGSGGGTT
T ss_pred cCCChHHHHcCccccC
Confidence 99998 9999999964
No 41
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.9e-39 Score=367.80 Aligned_cols=254 Identities=28% Similarity=0.460 Sum_probs=209.4
Q ss_pred ceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
|+..++||+|+||.||+|++. +..||+|+...... ...+. +.+|+.++++++||||+++++++....
T Consensus 47 ~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~----~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~--- 115 (321)
T 2c30_A 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ----QRREL----LFNEVVIMRDYQHFNVVEMYKSYLVGE--- 115 (321)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----CSHHH----HHHHHHHHTTCCCTTBCCEEEEEEETT---
T ss_pred hhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccch----hHHHH----HHHHHHHHHhCCCCCcceEEEEEEECC---
Confidence 788899999999999999984 67788888654321 11222 378999999999999999999998654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccc
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLER 965 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~ 965 (1141)
..++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus 116 -----------~~~lv~e~~~~~~L~~~l~~------~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~- 177 (321)
T 2c30_A 116 -----------ELWVLMEFLQGGALTDIVSQ------VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLD- 177 (321)
T ss_dssp -----------EEEEEECCCCSCBHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTT-
T ss_pred -----------EEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCC-
Confidence 35999999999999998864 369999999999999999999999999999999999999887
Q ss_pred ccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 966 KKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 966 ~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
+.+||+|||++........ ......||+.|+|||++.+ ..++.++|||||||++|+|++|
T Consensus 178 ------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~Dv~slG~il~el~~g 237 (321)
T 2c30_A 178 ------GRVKLSDFGFCAQISKDVP----------KRKSLVGTPYWMAPEVISR----SLYATEVDIWSLGIMVIEMVDG 237 (321)
T ss_dssp ------CCEEECCCTTCEECCSSSC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHHHHS
T ss_pred ------CcEEEeeeeeeeecccCcc----------ccccccCCccccCHhhhcC----CCCCchhhHHHHHHHHHHHHhC
Confidence 7899999999876543211 1124469999999999976 5678999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHH
Q 001143 1046 QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDL 1125 (1141)
Q Consensus 1046 k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~El 1125 (1141)
+.||......+....+.....+.+.. ....++.+.+++.+||+.||.+|||+.|+
T Consensus 238 ~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rps~~el 292 (321)
T 2c30_A 238 EPPYFSDSPVQAMKRLRDSPPPKLKN-------------------------SHKVSPVLRDFLERMLVRDPQERATAQEL 292 (321)
T ss_dssp SCTTTTSCHHHHHHHHHHSSCCCCTT-------------------------GGGSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCcCc-------------------------cccCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 99999887777766665544333221 01455679999999999999999999999
Q ss_pred HHHHHhhcCC
Q 001143 1126 YEMFVARTSS 1135 (1141)
Q Consensus 1126 L~~L~~~~~s 1135 (1141)
++|+|+....
T Consensus 293 l~hp~~~~~~ 302 (321)
T 2c30_A 293 LDHPFLLQTG 302 (321)
T ss_dssp HTSGGGGGCC
T ss_pred hcChhhccCC
Confidence 9999997643
No 42
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.7e-39 Score=362.23 Aligned_cols=285 Identities=22% Similarity=0.282 Sum_probs=206.9
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+++|++.++||+|+||+||+|.+. +..+|+|+... ........+ .+.+|+.++++++||||+++++++....
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~--~~~~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 75 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLE--SEDDPVIKK----IALREIRMLKQLKHPNLVNLLEVFRRKR 75 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC--CCC-HHHHH----HHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeec--cccchHHHH----HHHHHHHHHHhCCCCCccchhheeecCC
Confidence 468999999999999999999985 56677776532 222222223 3479999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 76 --------------~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~ 136 (311)
T 4agu_A 76 --------------RLHLVFEYCDHTVLHELDRY-----QRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT 136 (311)
T ss_dssp --------------EEEEEEECCSEEHHHHHHHT-----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------eEEEEEEeCCCchHHHHHhh-----hcCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc
Confidence 34999999999999988764 34699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||.+........ ......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 137 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l 196 (311)
T 4agu_A 137 KH-------SVIKLCDFGFARLLTGPSD----------YYDDEVATRWYRSPELLVG---DTQYGPPVDVWAIGCVFAEL 196 (311)
T ss_dssp TT-------SCEEECCCTTCEECC----------------------GGGCCHHHHHT---CSCCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeCCCchhccCccc----------ccCCCcCCccccChHHHhc---CCCCCcchhhHHHHHHHHHH
Confidence 87 7899999999976543211 1123468999999999875 24678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC---ccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC---HEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
++|+.||.+....+....+........+......... .....................+..+.+|+.+||+.||.+|
T Consensus 197 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 276 (311)
T 4agu_A 197 LSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTER 276 (311)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTS
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhc
Confidence 9999999988777665555332222222111111000 0000000000000000112566779999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
||++|+++|+|+..-
T Consensus 277 pt~~ell~hp~f~~~ 291 (311)
T 4agu_A 277 LTCEQLLHHPYFENI 291 (311)
T ss_dssp CCHHHHHTSGGGTTC
T ss_pred CCHHHHhcChHHHhc
Confidence 999999999999854
No 43
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1e-38 Score=358.31 Aligned_cols=261 Identities=24% Similarity=0.325 Sum_probs=203.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
-.+|++.+.||+|+||.||+|++. +..+|+|+...... ......+ ++.+|+.++++++||||+++++++.+.+
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~----~~~~e~~~l~~l~hp~iv~~~~~~~~~~ 84 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPR-EKEETLK----RFEREVHNSSQLSHQNIVSMIDVDEEDD 84 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSS-CCHHHHH----HHHHHHHHHTTCCBTTBCCEEEEEECSS
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCcc-ccHHHHH----HHHHHHHHHhcCCCCCCceEEEeeeeCC
Confidence 357999999999999999999984 56788887643321 2223233 3489999999999999999999988655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||++|++|.+++.. ..++++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 85 --------------~~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~ 145 (294)
T 4eqm_A 85 --------------CYYLVMEYIEGPTLSEYIES-----HGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID 145 (294)
T ss_dssp --------------EEEEEEECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred --------------eEEEEEeCCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC
Confidence 34999999999999999976 23699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++........ .......||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 146 ~~-------~~~kl~Dfg~~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 205 (294)
T 4eqm_A 146 SN-------KTLKIFDFGIAKALSETSL---------TQTNHVLGTVQYFSPEQAKG----EATDECTDIYSIGIVLYEM 205 (294)
T ss_dssp TT-------SCEEECCCSSSTTC----------------------CCSSCCHHHHHT----CCCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEeCCCccccccccc---------cccCccccCccccCHhHhcC----CCCCchHhHHHHHHHHHHH
Confidence 87 7899999999976543211 11223469999999999986 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC-C
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP-T 1121 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP-S 1121 (1141)
++|+.||.+....+..........+...... ....++.+.+++.+||..||.+|| +
T Consensus 206 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~l~~li~~~l~~dp~~R~~~ 262 (294)
T 4eqm_A 206 LVGEPPFNGETAVSIAIKHIQDSVPNVTTDV-----------------------RKDIPQSLSNVILRATEKDKANRYKT 262 (294)
T ss_dssp HHSSCSSCSSCHHHHHHHHHSSCCCCHHHHS-----------------------CTTSCHHHHHHHHHHSCSSGGGSCSS
T ss_pred HhCCCCCCCCChHHHHHHHhhccCCCcchhc-----------------------ccCCCHHHHHHHHHHhcCCHhHcccc
Confidence 9999999987776655444444333322111 014567799999999999999999 6
Q ss_pred HHHHHHHHHhh
Q 001143 1122 AGDLYEMFVAR 1132 (1141)
Q Consensus 1122 a~ElL~~L~~~ 1132 (1141)
++++.+.+...
T Consensus 263 ~~~l~~~l~~~ 273 (294)
T 4eqm_A 263 IQEMKDDLSSV 273 (294)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHHH
Confidence 77777766554
No 44
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.6e-39 Score=356.27 Aligned_cols=260 Identities=23% Similarity=0.285 Sum_probs=208.0
Q ss_pred CCceEeeeecccCceEEEEEEECCc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||.||+|.+... .+++|+..... .. ..+. +.+|+.++++++||||+++++++.+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~--~~--~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~- 79 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYF--VE--DVDR----FKQEIEIMKSLDHPNIIRLYETFEDNT- 79 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGG--CS--CHHH----HHHHHHHHHTCCCTTBCCEEEEEECSS-
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhc--cc--hHHH----HHHHHHHHHhCCCCCEeeEEEEEecCC-
Confidence 3589999999999999999998654 45666543221 11 1223 378999999999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+||++..
T Consensus 80 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~ 141 (277)
T 3f3z_A 80 -------------DIYLVMELCTGGELFERVVH-----KRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLT 141 (277)
T ss_dssp -------------EEEEEEECCCSCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred -------------eEEEEEeccCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEec
Confidence 34999999999999999876 246899999999999999999999999999999999999932
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ ...+.+||+|||++....... ......||+.|+|||++.+ .++.++||||||+++|+|+
T Consensus 142 ~----~~~~~~~l~Dfg~~~~~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~~l~~l~ 201 (277)
T 3f3z_A 142 D----SPDSPLKLIDFGLAARFKPGK-----------MMRTKVGTPYYVSPQVLEG-----LYGPECDEWSAGVMMYVLL 201 (277)
T ss_dssp S----STTCCEEECCCTTCEECCTTS-----------CBCCCCSCTTTCCHHHHTT-----CBCTTHHHHHHHHHHHHHH
T ss_pred C----CCCCcEEEEecccceeccCcc-----------chhccCCCCCccChHHhcc-----cCCchhhehhHHHHHHHHH
Confidence 2 111789999999997654321 1123468999999999865 4789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|+.||......+....+..+......... ...++.+.+++.+||+.||.+|||+.
T Consensus 202 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~li~~~l~~dp~~R~s~~ 257 (277)
T 3f3z_A 202 CGYPPFSAPTDSEVMLKIREGTFTFPEKDW------------------------LNVSPQAESLIRRLLTKSPKQRITSL 257 (277)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCHHHH------------------------TTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHhCCCCCCchhh------------------------hcCCHHHHHHHHHHccCChhhCcCHH
Confidence 999999988877777777655443222111 14566799999999999999999999
Q ss_pred HHHHHHHhhcCCC
Q 001143 1124 DLYEMFVARTSSS 1136 (1141)
Q Consensus 1124 ElL~~L~~~~~s~ 1136 (1141)
++++|+|+.....
T Consensus 258 ~~l~h~~~~~~~~ 270 (277)
T 3f3z_A 258 QALEHEWFEKQLS 270 (277)
T ss_dssp HHTTSHHHHHHHC
T ss_pred HHhcCHHHhcccc
Confidence 9999999976433
No 45
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=5.8e-39 Score=369.62 Aligned_cols=260 Identities=22% Similarity=0.356 Sum_probs=206.1
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeee
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGH 877 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~ 877 (1141)
.+..+.+|++.+.||+|+||.||+|++. +..+|+|+...... ......+. +.+|+.++.++ +||||++++++
T Consensus 4 ~~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~----~~~E~~~l~~~~~hp~iv~l~~~ 78 (345)
T 3a8x_A 4 DPLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELV-NDDEDIDW----VQTEKHVFEQASNHPFLVGLHSC 78 (345)
T ss_dssp CCCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGS-CSHHHHHH----HHHHHHHHHHTTTCTTBCCEEEE
T ss_pred CCCchhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHh-cchHHHHH----HHHHHHHHHhcCCCCccCeEEEE
Confidence 3456788999999999999999999985 56678887653321 12222333 47899999988 79999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+.+.. ..|+||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+
T Consensus 79 ~~~~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~ 139 (345)
T 3a8x_A 79 FQTES--------------RLFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 139 (345)
T ss_dssp EECSS--------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGG
T ss_pred EEeCC--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHH
Confidence 98655 35999999999999999976 236999999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||++.+ +.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||
T Consensus 140 NIll~~~-------g~~kL~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~ 198 (345)
T 3a8x_A 140 NVLLDSE-------GHIKLTDYGMCKEGLRPGD----------TTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGV 198 (345)
T ss_dssp GEEECTT-------SCEEECCGGGCBCSCCTTC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHH
T ss_pred HEEECCC-------CCEEEEeccccccccCCCC----------cccccCCCccccCccccCC----CCCChHHhHHHHHH
Confidence 9999887 8899999999975322111 1224579999999999986 56789999999999
Q ss_pred HHHHHHhCCCCCCCC---------CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHH
Q 001143 1038 LLLELLTLQVPYMGL---------SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF 1108 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~---------~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI 1108 (1141)
++|||++|+.||... ....+...+..... .++ ...+..+.++|
T Consensus 199 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p---------------------------~~~s~~~~~li 250 (345)
T 3a8x_A 199 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIP---------------------------RSLSVKAASVL 250 (345)
T ss_dssp HHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHH
T ss_pred HHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCC-CCC---------------------------CCCCHHHHHHH
Confidence 999999999999642 12223333322211 111 14556799999
Q ss_pred HHhcccCCCCCCCH------HHHHHHHHhhc
Q 001143 1109 RRCTEENPTERPTA------GDLYEMFVART 1133 (1141)
Q Consensus 1109 ~~cL~~DP~~RPSa------~ElL~~L~~~~ 1133 (1141)
.+||+.||.+||++ .|+++|+||..
T Consensus 251 ~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~ 281 (345)
T 3a8x_A 251 KSFLNKDPKERLGCHPQTGFADIQGHPFFRN 281 (345)
T ss_dssp HHHTCSSTTTSTTCCTTTHHHHHHTSGGGTT
T ss_pred HHHhcCCHhHCCCCCCcCCHHHHhcCCccCC
Confidence 99999999999995 89999999964
No 46
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.6e-39 Score=354.75 Aligned_cols=262 Identities=25% Similarity=0.408 Sum_probs=199.5
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+.+|++.++||+|+||.||+|.+.+..+|+|+.+....... ......+.+|+.+++.++||||+++++++.+...
T Consensus 5 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (271)
T 3dtc_A 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDI----SQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPN 80 (271)
T ss_dssp CTTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC--------------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--
T ss_pred chhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccH----HHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCc
Confidence 467899999999999999999999999999998654322111 1122334899999999999999999999986553
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCCCCee
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH---IMHRDIKSENIL 960 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g---IvHrDLKP~NIL 960 (1141)
. ++||||+++++|.+++.. ..+++..++.++.||+.||.|||++| |+||||||+||+
T Consensus 81 ~--------------~lv~e~~~~~~L~~~~~~------~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil 140 (271)
T 3dtc_A 81 L--------------CLVMEFARGGPLNRVLSG------KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL 140 (271)
T ss_dssp C--------------EEEEECCTTEEHHHHHTS------SCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEE
T ss_pred e--------------EEEEEcCCCCCHHHHhhc------CCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEE
Confidence 3 999999999999998853 46999999999999999999999999 899999999999
Q ss_pred eeccccc-CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 961 IDLERKK-ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 961 ld~~~~~-~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
++..... ....+.+||+|||++....... .....||+.|+|||++.+ ..++.++||||||+++
T Consensus 141 ~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l 204 (271)
T 3dtc_A 141 ILQKVENGDLSNKILKITDFGLAREWHRTT------------KMSAAGAYAWMAPEVIRA----SMFSKGSDVWSYGVLL 204 (271)
T ss_dssp ESSCCSSSCCSSCCEEECCCCC-------------------------CCGGGSCHHHHHH----CCCSHHHHHHHHHHHH
T ss_pred EecccccccccCcceEEccCCccccccccc------------ccCCCCccceeCHHHhcc----CCCCchhhHHHHHHHH
Confidence 9863110 0113789999999997544321 113468999999999986 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|+.||.+.........+........ .....++.+.+++.+||+.||.+|
T Consensus 205 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~~p~~R 258 (271)
T 3dtc_A 205 WELLTGEVPFRGIDGLAVAYGVAMNKLALP--------------------------IPSTCPEPFAKLMEDCWNPDPHSR 258 (271)
T ss_dssp HHHHHCCCTTTTSCHHHHHHHHHTSCCCCC--------------------------CCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHhCCCCCCCCCHHHHHHhhhcCCCCCC--------------------------CCcccCHHHHHHHHHHhcCCcccC
Confidence 999999999998776665555433321110 001455679999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001143 1120 PTAGDLYEMFVA 1131 (1141)
Q Consensus 1120 PSa~ElL~~L~~ 1131 (1141)
||+.|+++++..
T Consensus 259 ps~~e~l~~L~~ 270 (271)
T 3dtc_A 259 PSFTNILDQLTT 270 (271)
T ss_dssp CCHHHHHHHHHC
T ss_pred cCHHHHHHHHhc
Confidence 999999999853
No 47
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=5.4e-39 Score=371.27 Aligned_cols=259 Identities=24% Similarity=0.286 Sum_probs=209.3
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~ 878 (1141)
...+.+|++.++||+|+||.||+|++.. ..+|+|+...... ........+..|..++..+ +||||+++++++
T Consensus 16 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~ 90 (353)
T 2i0e_A 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCF 90 (353)
T ss_dssp ---CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE
T ss_pred CCchHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh-----hcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE
Confidence 4567899999999999999999999965 4577777543211 0111123347899999888 799999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.. ..|+||||++||+|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 91 ~~~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N 151 (353)
T 2i0e_A 91 QTMD--------------RLYFVMEYVNGGDLMYHIQQ-----VGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN 151 (353)
T ss_dssp ECSS--------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred EcCC--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHH
Confidence 8655 35999999999999999986 2369999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||+|+...... .......||+.|+|||++.+ ..++.++|||||||+
T Consensus 152 Ill~~~-------g~vkL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 210 (353)
T 2i0e_A 152 VMLDSE-------GHIKIADFGMCKENIWDG----------VTTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVL 210 (353)
T ss_dssp EEECTT-------SCEEECCCTTCBCCCCTT----------CCBCCCCSCGGGCCHHHHTT----CCBSTHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEEeCCcccccccCC----------cccccccCCccccChhhhcC----CCcCCcccccchHHH
Confidence 999987 889999999997532211 11224569999999999976 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|||++|+.||.+.+..++...+...... ++ ...+.++.+||.+||..||.+
T Consensus 211 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~dP~~ 262 (353)
T 2i0e_A 211 LYEMLAGQAPFEGEDEDELFQSIMEHNVA-YP---------------------------KSMSKEAVAICKGLMTKHPGK 262 (353)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHTCSCTTS
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------CCCCHHHHHHHHHHhhcCHHH
Confidence 99999999999988888877777554321 11 134567999999999999999
Q ss_pred CC-----CHHHHHHHHHhhc
Q 001143 1119 RP-----TAGDLYEMFVART 1133 (1141)
Q Consensus 1119 RP-----Sa~ElL~~L~~~~ 1133 (1141)
|| ++.++++|+||..
T Consensus 263 R~~~~~~~~~~i~~h~~f~~ 282 (353)
T 2i0e_A 263 RLGCGPEGERDIKEHAFFRY 282 (353)
T ss_dssp CTTCSTTHHHHHHTSGGGTT
T ss_pred cCCCCCCCHHHHhcCccccC
Confidence 99 4799999999964
No 48
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=3.2e-39 Score=368.20 Aligned_cols=292 Identities=21% Similarity=0.250 Sum_probs=204.1
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+++|++.++||+|+||+||+|.+. +..+|+|+.... .......+.+ .+|+.++++++||||+++++++.
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~ 103 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLE--HEEEGVPGTA----IREVSLLKELQHRNIIELKSVIH 103 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCC--C--------C----HHHHHHGGGCCCTTBCCEEEEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEccc--ccccccchhH----HHHHHHHHHcCCCCcceEEEEEe
Confidence 455778999999999999999999874 556777764322 2222222333 78999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.. ..++||||++ ++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+||
T Consensus 104 ~~~--------------~~~lv~e~~~-~~L~~~~~~-----~~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NI 163 (329)
T 3gbz_A 104 HNH--------------RLHLIFEYAE-NDLKKYMDK-----NPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL 163 (329)
T ss_dssp ETT--------------EEEEEEECCS-EEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred cCC--------------EEEEEEecCC-CCHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHE
Confidence 755 3499999998 699999976 34699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.++ ....+.+||+|||+++....... ......||+.|+|||++.+ ...++.++|||||||++
T Consensus 164 ll~~~~--~~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il 228 (329)
T 3gbz_A 164 LLSVSD--ASETPVLKIGDFGLARAFGIPIR----------QFTHEIITLWYRPPEILLG---SRHYSTSVDIWSIACIW 228 (329)
T ss_dssp EEEC-------CCEEEECCTTHHHHHC---------------------CCTTCCHHHHTT---CCCCCTHHHHHHHHHHH
T ss_pred EEecCC--CCccceEEECcCCCccccCCccc----------ccCCCcCCccccCHHHhcC---CCCCCcHHHHHHHHHHH
Confidence 996541 11226799999999976543211 1123468999999999876 23578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCc--cccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCH--EHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|+|++|+.||.+....+....+.. ...+... .+....... ....................++++.+||.+||+.||
T Consensus 229 ~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 307 (329)
T 3gbz_A 229 AEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDT-TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDP 307 (329)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTT-TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSG
T ss_pred HHHHHCCCCcCCCCHHHHHHHHHHHhCCCchh-hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCCh
Confidence 999999999998777665555422 1111111 000000000 000000000000001112356789999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001143 1117 TERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~s 1135 (1141)
.+|||+.|+++|+||....
T Consensus 308 ~~R~t~~e~l~hp~f~~~~ 326 (329)
T 3gbz_A 308 VKRISAKNALEHPYFSHND 326 (329)
T ss_dssp GGSCCHHHHHTSGGGSSSC
T ss_pred hhCCCHHHHhCCcccCCCC
Confidence 9999999999999998654
No 49
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.3e-39 Score=353.97 Aligned_cols=257 Identities=21% Similarity=0.341 Sum_probs=210.0
Q ss_pred CCCCceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..++|++.+.||+|+||.||+|.+ .+..+|+|+.... ... .+. +.+|+.++++++||||+++++++.+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~---~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~ 78 (269)
T 4hcu_A 8 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREG--AMS---EED----FIEEAEVMMKLSHPKLVQLYGVCLEQA 78 (269)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTT--SBC---HHH----HHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred ChhhceeeheecCCCccEEEEEEecCCCeEEEEEeccc--ccC---HHH----HHHHHHHHHhCCCCCEeeEEEEEecCC
Confidence 346799999999999999999998 5666888876422 111 123 379999999999999999999988655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .++||||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 79 ~--------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~ 140 (269)
T 4hcu_A 79 P--------------ICLVFEFMEHGCLSDYLRT----QRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG 140 (269)
T ss_dssp S--------------EEEEEECCTTCBHHHHHHT----TTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred c--------------eEEEEEeCCCCcHHHHHHh----cCcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc
Confidence 3 4999999999999999975 234699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++......... ......+|+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 141 ~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 200 (269)
T 4hcu_A 141 EN-------QVIKVSDFGMTRFVLDDQYT---------SSTGTKFPVKWASPEVFSF----SRYSSKSDVWSFGVLMWEV 200 (269)
T ss_dssp GG-------GCEEECCTTGGGGBCCHHHH---------STTSTTCCGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEeccccccccccccccc---------cccCcccccccCCHHHhcC----CCCCchhhhHHHHHHHHHH
Confidence 87 78999999999765432211 1123357889999999976 5688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |+.||......+....+..+..+..+. ..++.+.+++.+||+.||.+|||
T Consensus 201 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~~p~~Rps 253 (269)
T 4hcu_A 201 FSEGKIPYENRSNSEVVEDISTGFRLYKPR---------------------------LASTHVYQIMNHCWRERPEDRPA 253 (269)
T ss_dssp HTTSCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hcCCCCCCCCCCHHHHHHHHhcCccCCCCC---------------------------cCCHHHHHHHHHHccCCcccCcC
Confidence 99 999999888877777765543322211 34567999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
+.++++++.....
T Consensus 254 ~~~ll~~l~~l~~ 266 (269)
T 4hcu_A 254 FSRLLRQLAEIAE 266 (269)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999987543
No 50
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.2e-40 Score=376.61 Aligned_cols=259 Identities=21% Similarity=0.277 Sum_probs=203.4
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+.+|++.+.||+|+||.||+|.+ .+..||+|+..... ........++.+|+.+++.++||||+++++++.
T Consensus 5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~ 79 (336)
T 3h4j_B 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQL-----LKKSDMHMRVEREISYLKLLRHPHIIKLYDVIT 79 (336)
T ss_dssp CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHH-----ccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEE
Confidence 34578899999999999999999998 56678888764221 111122234589999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
... ..++||||+ +|+|.+++.. ...+++.+++.++.||+.||.|||++||+||||||+||
T Consensus 80 ~~~--------------~~~lv~E~~-~g~l~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NI 139 (336)
T 3h4j_B 80 TPT--------------DIVMVIEYA-GGELFDYIVE-----KKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENL 139 (336)
T ss_dssp CSS--------------EEEEEECCC-CEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTE
T ss_pred eCC--------------EEEEEEECC-CCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhE
Confidence 655 359999999 6899998876 24699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||++....... ......||+.|+|||++.+. ...+.++|||||||++
T Consensus 140 ll~~~-------~~~kl~DFG~s~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il 198 (336)
T 3h4j_B 140 LLDDN-------LNVKIADFGLSNIMTDGN-----------FLKTSCGSPNYAAPEVINGK---LYAGPEVDVWSCGIVL 198 (336)
T ss_dssp EECTT-------CCEEECCSSCTBTTTTSB-----------TTCCCTTSTTTSCGGGSCCS---GGGCHHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEEEeccceeccCCc-----------ccccccCCcCcCCHHHHcCC---CCCCCccchhHHHHHH
Confidence 99987 789999999997654321 11234699999999998762 2236899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|+.||.+....+....+..+. ... +...++.+.+||.+||+.||.+|
T Consensus 199 ~~ll~g~~Pf~~~~~~~~~~~i~~~~-------------------------~~~---p~~~s~~~~~li~~~L~~dP~~R 250 (336)
T 3h4j_B 199 YVMLVGRLPFDDEFIPNLFKKVNSCV-------------------------YVM---PDFLSPGAQSLIRRMIVADPMQR 250 (336)
T ss_dssp HHHHHSSCSSBCSSSTTCBCCCCSSC-------------------------CCC---CTTSCHHHHHHHHTTSCSSGGGS
T ss_pred HHHHhCCCCCCCccHHHHHHHHHcCC-------------------------CCC---cccCCHHHHHHHHHHcCCChhHC
Confidence 99999999997643222111110000 000 11456779999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
||++|+++|+|+...
T Consensus 251 pt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 251 ITIQEIRRDPWFNVN 265 (336)
T ss_dssp CCHHHHTTCHHHHTT
T ss_pred cCHHHHHhChhhccC
Confidence 999999999999754
No 51
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.4e-39 Score=365.56 Aligned_cols=261 Identities=19% Similarity=0.322 Sum_probs=208.6
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~-----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
...+|++.+.||+|+||.||+|.+. +..||+|+.... ......+. +.+|+.++++++||||+++++++
T Consensus 47 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~ 119 (325)
T 3kul_A 47 EASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG---YTERQRRD----FLSEASIMGQFDHPNIIRLEGVV 119 (325)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT---CCHHHHHH----HHHHHHHHTTCCCTTBCCEEEEE
T ss_pred ChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC---CCHHHHHH----HHHHHHHHHhCCCCCCCcEEEEE
Confidence 4567999999999999999999984 233777765422 12333333 48999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.... ++||||+++++|.++++. ....+++..++.|+.||+.||.|||++||+||||||+|
T Consensus 120 ~~~~~~--------------~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N 181 (325)
T 3kul_A 120 TRGRLA--------------MIVTEYMENGSLDTFLRT----HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARN 181 (325)
T ss_dssp CGGGCC--------------EEEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred EeCCcc--------------EEEeeCCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcce
Confidence 765543 999999999999999965 23469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||+++.......... ......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 182 Ill~~~-------~~~kl~Dfg~a~~~~~~~~~~~-------~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~i 243 (325)
T 3kul_A 182 VLVDSN-------LVCKVSDFGLSRVLEDDPDAAY-------TTTGGKIPIRWTAPEAIAF----RTFSSASDVWSFGVV 243 (325)
T ss_dssp EEECTT-------CCEEECCCSSCEECC----CCE-------ECC---CCGGGSCHHHHHH----CEECHHHHHHHHHHH
T ss_pred EEECCC-------CCEEECCCCcccccccCcccee-------eccCCCCcccccCHhHhcC----CCCCcHHHHHHHHHH
Confidence 999887 7899999999987544221110 1112346788999999986 567899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|+|++ |..||.+....++...+..+..+..+. .++..+.+++.+||..||.
T Consensus 244 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~ 296 (325)
T 3kul_A 244 MWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPM---------------------------GCPHALHQLMLDCWHKDRA 296 (325)
T ss_dssp HHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCC---------------------------CcCHHHHHHHHHHccCChh
Confidence 999999 999999888887777776554332211 4566799999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001143 1118 ERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~~ 1134 (1141)
+|||+.++++.+.....
T Consensus 297 ~Rps~~eil~~L~~l~~ 313 (325)
T 3kul_A 297 QRPRFSQIVSVLDALIR 313 (325)
T ss_dssp GSCCHHHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHHHh
Confidence 99999999999877543
No 52
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-39 Score=362.35 Aligned_cols=291 Identities=21% Similarity=0.224 Sum_probs=207.8
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeEe
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkllg~~~ 879 (1141)
..+|++.++||+|+||+||+|++ .+..||+|+........... .....+.+|+.+++++ +||||+++++++.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~ 84 (308)
T 3g33_A 8 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGG---GLPISTVREVALLRRLEAFEHPNVVRLMDVCA 84 (308)
T ss_dssp --CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSS---CCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEeccccccccc---ccchhHHHHHHHHHHHhhcCCCCeEEeeeeee
Confidence 46899999999999999999996 46778888865443211110 1111225677777666 4999999999987
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.... ......++||||+. ++|.+++.. .....+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 85 ~~~~---------~~~~~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Ni 151 (308)
T 3g33_A 85 TSRT---------DREIKVTLVFEHVD-QDLRTYLDK---APPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENI 151 (308)
T ss_dssp ECCS---------SSEEEEEEEEECCC-CBHHHHHHT---CCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTE
T ss_pred ccCC---------CCceeEEEEehhhh-cCHHHHHhh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHE
Confidence 6431 12335799999997 699999976 2333599999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 152 l~~~~-------~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 209 (308)
T 3g33_A 152 LVTSG-------GTVKLADFGLARIYSYQM-----------ALTPVVVTLWYRAPEVLLQ----STYATPVDMWSVGCIF 209 (308)
T ss_dssp EECTT-------SCEEECSCSCTTTSTTCC-----------CSGGGGCCCSSCCHHHHHT----SCCCSTHHHHHHHHHH
T ss_pred EEcCC-------CCEEEeeCccccccCCCc-----------ccCCccccccccCchHHcC----CCCCchHHHHHHHHHH
Confidence 99887 789999999997653321 1224568999999999976 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|+.||.+.+..+....+...........+..........+ ...............++.+.+||.+||+.||++|
T Consensus 210 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 288 (308)
T 3g33_A 210 AEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAF-PPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKR 288 (308)
T ss_dssp HHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGS-CCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcccccc-CCCCCCcHHHhCccccHHHHHHHHHHhcCCCccC
Confidence 999999999998887776655532111111111100000000000 0000000111122566789999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
||+.|+++|+|+...
T Consensus 289 ~t~~e~l~h~~~~~~ 303 (308)
T 3g33_A 289 ISAFRALQHSYLHKD 303 (308)
T ss_dssp CCHHHHHTSTTC---
T ss_pred CCHHHHhcCccccCC
Confidence 999999999999754
No 53
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=6.1e-39 Score=384.07 Aligned_cols=284 Identities=17% Similarity=0.236 Sum_probs=205.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.++||+|+||+||+|.+. +..||+|+.. .........+ ++.+|+.+++.++|||||++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~--~~~~~~~~~~----~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 134 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLS--RPFQNQTHAK----RAYRELVLMKCVNHKNIISLLNVFTPQK 134 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEE--SGGGSHHHHH----HHHHHHHHHHHCCCTTBCCCSEEECSCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEEC--ccccChHHHH----HHHHHHHHHHhCCCCCCCcEEEEEccCC
Confidence 578999999999999999999985 5567777654 2222223333 3479999999999999999999997644
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ....+.|+||||++ ++|.+.+.. .+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 135 ~~--------~~~~~~~lv~E~~~-~~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~ 198 (464)
T 3ttj_A 135 TL--------EEFQDVYLVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 198 (464)
T ss_dssp ST--------TTCCEEEEEEECCS-EEHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred cc--------ccCCeEEEEEeCCC-CCHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEe
Confidence 22 12346799999997 567776643 489999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+|+...... .....+||+.|+|||++.+ ..|+.++|||||||++|||
T Consensus 199 ~~-------~~~kl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~el 256 (464)
T 3ttj_A 199 SD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGEM 256 (464)
T ss_dssp TT-------SCEEECCCCCC-----CC-----------CC----CCCTTCCHHHHTT----CCCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEEEEeeeecCCCc-----------ccCCCcccccccCHHHHcC----CCCCHHHHHHHHHHHHHHH
Confidence 87 789999999997654311 1224579999999999987 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCC---------------CCchhhhhhHHHHHHH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGF---------------EKPEAELETLSFLVDV 1107 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~L~dL 1107 (1141)
++|+.||.+.+..+....+......+.+..+....... .......... .........+.++.+|
T Consensus 257 l~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dL 335 (464)
T 3ttj_A 257 VRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTV-RNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDL 335 (464)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHH-HHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhh-hhHhhcccccCCCChHHhCcccccccccccccccCHHHHHH
Confidence 99999999988777666663322222222111110000 0000000000 0011112336789999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
|.+||++||.+|||++|+++|+|+..
T Consensus 336 l~~mL~~dP~~R~ta~e~L~Hp~~~~ 361 (464)
T 3ttj_A 336 LSKMLVIDPAKRISVDDALQHPYINV 361 (464)
T ss_dssp HHHHSCSSTTTSCCHHHHHTSTTTGG
T ss_pred HHHHcCCChhhCCCHHHHhcChhhhh
Confidence 99999999999999999999999973
No 54
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=2.1e-39 Score=382.03 Aligned_cols=265 Identities=22% Similarity=0.288 Sum_probs=211.2
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
..++|++.++||+|+||.||+|++. +..+|+|+..... .........+.+|+.+++.++|||||++++++.+.
T Consensus 67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~-----~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFE-----MIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhh-----hhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 3567999999999999999999985 5567888754211 11111112347899999999999999999999875
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. +.|+||||++||+|.++++. ..+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 142 ~--------------~~~lV~E~~~gg~L~~~l~~------~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl 201 (410)
T 3v8s_A 142 R--------------YLYMVMEYMPGGDLVNLMSN------YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201 (410)
T ss_dssp S--------------EEEEEECCCTTEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred C--------------EEEEEEeCCCCCcHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE
Confidence 5 34999999999999999975 258999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+|+........ .....+||+.|+|||++.+......++.++|||||||++||
T Consensus 202 ~~~-------g~ikL~DFG~a~~~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilye 265 (410)
T 3v8s_A 202 DKS-------GHLKLADFGTCMKMNKEGMV---------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYE 265 (410)
T ss_dssp CTT-------SCEEECCCTTCEECCTTSEE---------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHH
T ss_pred CCC-------CCEEEeccceeEeeccCCcc---------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHH
Confidence 987 88999999999765432211 11245799999999999863322337899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE-- 1118 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~-- 1118 (1141)
|++|+.||.+.+..+....+..... ...+. ....+.++.+||.+||..+|.+
T Consensus 266 ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-------------------------~~~~s~~~~~li~~lL~~~~~rlg 320 (410)
T 3v8s_A 266 MLVGDTPFYADSLVGTYSKIMNHKNSLTFPD-------------------------DNDISKEAKNLICAFLTDREVRLG 320 (410)
T ss_dssp HHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT-------------------------TCCCCHHHHHHHHHHSSCGGGCTT
T ss_pred HHhCCCCCCCCChhhHHHHHHhccccccCCC-------------------------cccccHHHHHHHHHHccChhhhCC
Confidence 9999999998888777776643210 00000 0145667999999999999988
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
||+++||++|+||+..
T Consensus 321 R~~~~ei~~Hp~f~~~ 336 (410)
T 3v8s_A 321 RNGVEEIKRHLFFKND 336 (410)
T ss_dssp SSCHHHHHTSGGGCCS
T ss_pred CCCHHHHhcCccccCC
Confidence 9999999999999764
No 55
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.2e-39 Score=363.40 Aligned_cols=268 Identities=24% Similarity=0.245 Sum_probs=203.3
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCCh------------------HHHHHhHHhHHHHHHH
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSA------------------DEIRNFEYSCLGEVRM 862 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~------------------~~~~~~~~~~~~Ei~i 862 (1141)
..+.+|++.+.||+|+||.||+|++. +..+|+|+.......... .........+.+|+.+
T Consensus 10 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~ 89 (298)
T 2zv2_A 10 VQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAI 89 (298)
T ss_dssp CEETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHH
T ss_pred eeecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHH
Confidence 44678999999999999999999984 567888876533211100 0001112345899999
Q ss_pred HhhCCCCCccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHH
Q 001143 863 LGALRHSCIVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALV 942 (1141)
Q Consensus 863 L~~L~HpNIVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~ 942 (1141)
+++++||||+++++++.+.. ....++||||+++++|.+++. ...+++..++.++.||+.||.
T Consensus 90 l~~l~h~~iv~~~~~~~~~~------------~~~~~lv~e~~~~~~l~~~~~------~~~~~~~~~~~~~~qi~~~l~ 151 (298)
T 2zv2_A 90 LKKLDHPNVVKLVEVLDDPN------------EDHLYMVFELVNQGPVMEVPT------LKPLSEDQARFYFQDLIKGIE 151 (298)
T ss_dssp HHTCCCTTBCCEEEEEECSS------------SSEEEEEEECCTTCBSCCSSC------SSCCCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCCCeEEEEEEcCC------------CCEEEEEEecCCCCcHHHHhh------cCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999987632 125699999999999877543 247999999999999999999
Q ss_pred HHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001143 943 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1022 (1141)
Q Consensus 943 yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1022 (1141)
|||++||+||||||+|||++.+ +.+||+|||++......... .....||+.|+|||++.+..
T Consensus 152 ~lH~~~ivH~Dlkp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~----------~~~~~gt~~y~aPE~~~~~~- 213 (298)
T 2zv2_A 152 YLHYQKIIHRDIKPSNLLVGED-------GHIKIADFGVSNEFKGSDAL----------LSNTVGTPAFMAPESLSETR- 213 (298)
T ss_dssp HHHHTTEECCCCCGGGEEECTT-------SCEEECCCTTCEECSSSSCE----------ECCCCSCGGGCCGGGCCTTC-
T ss_pred HHHHCCeeccCCCHHHEEECCC-------CCEEEecCCCcccccccccc----------ccCCcCCccccChhhhccCC-
Confidence 9999999999999999999887 78999999999765432111 12346999999999987521
Q ss_pred CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHH
Q 001143 1023 PNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1102 (1141)
Q Consensus 1023 ~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1141)
...++.++|||||||++|+|++|+.||...........+......... ....++
T Consensus 214 ~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~ 267 (298)
T 2zv2_A 214 KIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD--------------------------QPDIAE 267 (298)
T ss_dssp CCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS--------------------------SSCCCH
T ss_pred CCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCC--------------------------ccccCH
Confidence 112478999999999999999999999887766666555433221100 014456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1103 FLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1103 ~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.+.++|.+||+.||.+|||+.|+++|+|+.
T Consensus 268 ~l~~li~~~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 268 DLKDLITRMLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HHHHHHHHHTCSCTTTSCCHHHHTTCHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHhcCcccc
Confidence 799999999999999999999999999985
No 56
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.7e-39 Score=370.16 Aligned_cols=261 Identities=24% Similarity=0.280 Sum_probs=203.3
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.+++|++.+.||+|+||.||+|.+. +..+|+|+...+.. ....+ .+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~----~~~~E~~~l~~l~hpnIv~~~~~~~~~ 77 (323)
T 3tki_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPE----NIKKEICINKMLNHENVVKFYGHRREG 77 (323)
T ss_dssp TTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------------CHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccc---cchHH----HHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 3678999999999999999999985 66788887653321 11122 347999999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+++++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|||+
T Consensus 78 ~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll 138 (323)
T 3tki_A 78 N--------------IQYLFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138 (323)
T ss_dssp S--------------EEEEEEECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred C--------------eEEEEEEcCCCCcHHHHHhh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE
Confidence 5 34999999999999998854 3469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||++..+...... .......||+.|+|||++.+. ..++.++|||||||++|+
T Consensus 139 ~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwslG~il~~ 200 (323)
T 3tki_A 139 DER-------DNLKISDFGLATVFRYNNRE--------RLLNKMCGTLPYVAPELLKRR---EFHAEPVDVWSCGIVLTA 200 (323)
T ss_dssp CTT-------CCEEECCCTTCEECEETTEE--------CCBCSCCSCGGGSCHHHHHCS---SBCHHHHHHHHHHHHHHH
T ss_pred eCC-------CCEEEEEeeccceeccCCcc--------cccCCCccCcCccCcHHhccC---CCCCCcccHHHHHHHHHH
Confidence 887 78999999999765432211 111245699999999999762 234689999999999999
Q ss_pred HHhCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++|+.||...... .............. .....+..+.+|+.+||+.||.+||
T Consensus 201 ll~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~L~~dP~~R~ 254 (323)
T 3tki_A 201 MLAGELPWDQPSDSCQEYSDWKEKKTYLN--------------------------PWKKIDSAPLALLHKILVENPSARI 254 (323)
T ss_dssp HHHSSCSCSSSCTTSHHHHHHHTTCTTST--------------------------TGGGSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHhCCCCCCCCchHHHHHHHHhcccccCC--------------------------ccccCCHHHHHHHHHHccCChhhCc
Confidence 99999999764432 12222211111000 0114566789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
|+.|+++|+|+...
T Consensus 255 t~~eil~h~~~~~~ 268 (323)
T 3tki_A 255 TIPDIKKDRWYNKP 268 (323)
T ss_dssp CHHHHTTCTTTTCC
T ss_pred CHHHHhhChhhccc
Confidence 99999999999753
No 57
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.7e-39 Score=377.28 Aligned_cols=259 Identities=21% Similarity=0.338 Sum_probs=203.7
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~ 878 (1141)
...+.+|++.++||+|+||.||+|++. +..+|+|+.+..... .....+ .+.+|..++.++ +|||||++++++
T Consensus 48 ~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~-~~~~~~----~~~~E~~il~~~~~hp~Iv~l~~~~ 122 (396)
T 4dc2_A 48 SLGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVN-DDEDID----WVQTEKHVFEQASNHPFLVGLHSCF 122 (396)
T ss_dssp -CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC-----CC----HHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred CCChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhcc-CHHHHH----HHHHHHHHHHhcCCCCCcCeeEEEE
Confidence 345788999999999999999999985 456788876533221 112222 237899999887 799999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.. ..++||||++||+|..++.+ ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 123 ~~~~--------------~~~lV~E~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~N 183 (396)
T 4dc2_A 123 QTES--------------RLFFVIEYVNGGDLMFHMQR-----QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDN 183 (396)
T ss_dssp ECSS--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGG
T ss_pred EECC--------------EEEEEEEcCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHH
Confidence 8755 35999999999999999986 2469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||+|+...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 184 ILl~~~-------g~ikL~DFGla~~~~~~~----------~~~~~~~gt~~Y~aPE~l~~----~~~~~~~DiwslGvl 242 (396)
T 4dc2_A 184 VLLDSE-------GHIKLTDYGMCKEGLRPG----------DTTSTFCGTPNYIAPEILRG----EDYGFSVDWWALGVL 242 (396)
T ss_dssp EEECTT-------SCEEECCCTTCBCCCCTT----------CCBCCCCBCGGGCCHHHHTT----CCBCTHHHHHHHHHH
T ss_pred EEECCC-------CCEEEeecceeeecccCC----------CccccccCCcccCCchhhcC----CCCChHHHHHHHHHH
Confidence 999988 889999999997532211 11234579999999999986 568899999999999
Q ss_pred HHHHHhCCCCCCCCC---------HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHH
Q 001143 1039 LLELLTLQVPYMGLS---------ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFR 1109 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~---------~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~ 1109 (1141)
+|||++|+.||.... ...+...+..... .++ ...+.++.+||.
T Consensus 243 lyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~-~~p---------------------------~~~s~~~~~li~ 294 (396)
T 4dc2_A 243 MFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-RIP---------------------------RSLSVKAASVLK 294 (396)
T ss_dssp HHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHHH
T ss_pred HHHHHhCCCCCcccccccccchhhHHHHHHHHhcccc-CCC---------------------------CcCCHHHHHHHH
Confidence 999999999996421 1223333322211 111 145567999999
Q ss_pred HhcccCCCCCCCH------HHHHHHHHhhc
Q 001143 1110 RCTEENPTERPTA------GDLYEMFVART 1133 (1141)
Q Consensus 1110 ~cL~~DP~~RPSa------~ElL~~L~~~~ 1133 (1141)
+||+.||.+||++ +|+++|+||..
T Consensus 295 ~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~ 324 (396)
T 4dc2_A 295 SFLNKDPKERLGCHPQTGFADIQGHPFFRN 324 (396)
T ss_dssp HHTCSCTTTSTTCSTTTHHHHHHHSTTTTT
T ss_pred HHhcCCHhHcCCCCCCCCHHHHhcCccccC
Confidence 9999999999984 89999999964
No 58
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.1e-39 Score=368.01 Aligned_cols=284 Identities=19% Similarity=0.259 Sum_probs=209.8
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-----CCCccceeee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-----HSCIVEMYGH 877 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-----HpNIVkllg~ 877 (1141)
-++|++.++||+|+||+||+|++ .+..+|+|+... ....... +..|+.+++++. ||||++++++
T Consensus 34 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~~----~~~e~~~l~~l~~~~~~h~~iv~~~~~ 104 (360)
T 3llt_A 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN-----IKKYTRS----AKIEADILKKIQNDDINNNNIVKYHGK 104 (360)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS-----CHHHHHH----HHHHHHHHHHTCCCSTTGGGBCCEEEE
T ss_pred cCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc-----chhhhhh----hHHHHHHHHHhcccCCCCCCeecccce
Confidence 35799999999999999999998 466788887541 1222223 368999999986 9999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+...+ +.++||||+ +++|.+++.. .....+++..++.|+.||+.||+|||++||+||||||+
T Consensus 105 ~~~~~--------------~~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~ 166 (360)
T 3llt_A 105 FMYYD--------------HMCLIFEPL-GPSLYEIITR---NNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPE 166 (360)
T ss_dssp EEETT--------------EEEEEECCC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred eeECC--------------eeEEEEcCC-CCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcc
Confidence 98654 459999999 8999999986 23345999999999999999999999999999999999
Q ss_pred Ceeeeccccc------------------CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcc
Q 001143 958 NILIDLERKK------------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA 1019 (1141)
Q Consensus 958 NILld~~~~~------------------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 1019 (1141)
|||++..... ....+.+||+|||+++..... .....||+.|+|||++.+
T Consensus 167 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-------------~~~~~gt~~y~aPE~~~~ 233 (360)
T 3llt_A 167 NILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-------------HGSIINTRQYRAPEVILN 233 (360)
T ss_dssp GEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-------------CCSCCSCGGGCCHHHHTT
T ss_pred cEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC-------------CcCccCcccccCcHHHcC
Confidence 9999751000 001278999999999754321 123468999999999986
Q ss_pred ccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccc-cccCCC--C-----
Q 001143 1020 MHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEV-AQSGSG--F----- 1091 (1141)
Q Consensus 1020 ~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~-~~~~~~--~----- 1091 (1141)
..++.++|||||||++|+|++|+.||.+....+....+.....+................. ...... +
T Consensus 234 ----~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 309 (360)
T 3llt_A 234 ----LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENAS 309 (360)
T ss_dssp ----CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCS
T ss_pred ----CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCccccc
Confidence 5688999999999999999999999998887777766644443333222211110000000 000000 0
Q ss_pred ----------CCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1092 ----------EKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1092 ----------~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
..+......++.+.+||.+||+.||.+|||+.|+++|+|++
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 310 SINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp CHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred chhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 00111112336788999999999999999999999999985
No 59
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=5.3e-39 Score=374.68 Aligned_cols=297 Identities=19% Similarity=0.214 Sum_probs=210.2
Q ss_pred CCCCCceEeeeeccc--CceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 803 GSFPSLSSCDEAGKS--VSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~G--sfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
....+|++.++||+| +||.||+|++. +..||+|+..... ......+ .+.+|+.++++++|||||++++++
T Consensus 22 ~~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~ 95 (389)
T 3gni_B 22 PEGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEA--CSNEMVT----FLQGELHVSKLFNHPNIVPYRATF 95 (389)
T ss_dssp CCGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGG--SCHHHHH----HHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred CCCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccc--cChHHHH----HHHHHHHHHHhCCCCCCCcEeEEE
Confidence 345679999999999 99999999985 6678888765432 2233333 347899999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.+ ..++||||+++++|.+++.. .....+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 96 ~~~~--------------~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~N 158 (389)
T 3gni_B 96 IADN--------------ELWVVTSFMAYGSAKDLICT---HFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASH 158 (389)
T ss_dssp EETT--------------EEEEEEECCTTCBHHHHHHH---TCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred EECC--------------EEEEEEEccCCCCHHHHHhh---hcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 8755 34999999999999999976 223469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||.+............ .........||+.|+|||++.+. ...++.++|||||||+
T Consensus 159 Ill~~~-------~~~kl~dfg~~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~~~DiwslG~i 226 (389)
T 3gni_B 159 ILISVD-------GKVYLSGLRSNLSMISHGQRQRV---VHDFPKYSVKVLPWLSPEVLQQN--LQGYDAKSDIYSVGIT 226 (389)
T ss_dssp EEECTT-------CCEEECCGGGCEECEETTEECSC---BCCCCTTCTTTGGGSCHHHHSTT--SSCBCTHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEcccccceeeccccccccc---cccccccccccccccCHHHHhcc--CCCCCcHhHHHHHHHH
Confidence 999887 78999999998764332211100 11123345799999999999762 1457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC-------------ccccccc-----cCCCCCCchhhhhh
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-------------HEHEVAQ-----SGSGFEKPEAELET 1100 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-------------~~~~~~~-----~~~~~~~~~~~~~~ 1100 (1141)
+|+|++|+.||.+.+..+....+..+..+.+.......... ....... ..............
T Consensus 227 l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (389)
T 3gni_B 227 ACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTF 306 (389)
T ss_dssp HHHHHHSSCTTTTCCSTTHHHHC--------------------------------------------------------C
T ss_pred HHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccCCCCCCcccccc
Confidence 99999999999876554443333222221111000000000 0000000 00000000112245
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1101 LSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1101 ~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
++.+.+||.+||+.||.+|||+.|+++|+|+...
T Consensus 307 s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~ 340 (389)
T 3gni_B 307 SPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQI 340 (389)
T ss_dssp CHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC
T ss_pred CHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHH
Confidence 6789999999999999999999999999999753
No 60
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2e-38 Score=358.63 Aligned_cols=269 Identities=24% Similarity=0.356 Sum_probs=205.9
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
....+|++.++||+|+||.||+|.+.+ .+++|+.+ .........+.+ .+|+.++++++||||+++++++....
T Consensus 33 i~~~~~~~~~~lG~G~~g~Vy~~~~~~-~~avk~~k--~~~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 105 (307)
T 3lb7_A 33 IEASEVMLSTRIGSGSFGTVYKGKWHG-DVAVKILK--VVDPTPEQFQAF----RNEVAVLRKTRHVNILLFMGYMTKDN 105 (307)
T ss_dssp CCTTSCCEEEEEEECSSCEEEEEESSS-EEEEEECC--CSSCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred ecccceEEEeEecCCCCeEEEEEEECC-EEEEEEEe--cCCCCHHHHHHH----HHHHHHHHhCCCCCEEEEEEEEccCc
Confidence 446789999999999999999999765 46777644 333334444444 89999999999999999999875432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.++||||+++++|.+++.. ....+++..+..|+.||+.||+|||++||+||||||+|||++
T Consensus 106 ---------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~ 166 (307)
T 3lb7_A 106 ---------------LAIVTQWCEGSSLYKHLHV----QETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH 166 (307)
T ss_dssp ---------------CEEEEECCSSCBHHHHHHT----SCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEEC
T ss_pred ---------------EEEEEecCCCCcHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEc
Confidence 3899999999999999874 235799999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++......... .......||+.|+|||++.... ...++.++|||||||++|+|
T Consensus 167 ~~-------~~~kl~DFg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~el 230 (307)
T 3lb7_A 167 EG-------LTVKIGDFGLATVKSRWSGS--------QQVEQPTGSVLWMAPEVIRMQD-NNPFSFQSDVYSYGIVLYEL 230 (307)
T ss_dssp TT-------SCEEECCCCSSCC--------------------CCCCTTSCCHHHHHCCS-SCCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccCCCceeccccccc--------ccccCCCCCcceECcceeeccC-CCCCCchhhHHHHHHHHHHH
Confidence 87 78999999999754321111 1122346999999999986321 25678999999999999999
Q ss_pred HhCCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LTLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++|+.||......+ ....+..+....... .....+++.+.+++.+||+.||++||+
T Consensus 231 ltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~~p~~RPs 287 (307)
T 3lb7_A 231 MTGELPYSHINNRDQIIFMVGRGYASPDLS-----------------------KLYKNCPKAMKRLVADCVKKVKEERPL 287 (307)
T ss_dssp HHSSCTTTTCCCHHHHHHHHHHTCCCCCST-----------------------TSCSSSCHHHHHHHHHHSCSSSTTSCC
T ss_pred HhCCCCCccCCcHHHHHHHHhcCCCCcchh-----------------------hhhcCCcHHHHHHHHHHhhCChhhCcC
Confidence 99999998755444 333333332211100 001145677999999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001143 1122 AGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1122 a~ElL~~L~~~~~s~ 1136 (1141)
+.|++++++....+-
T Consensus 288 ~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 288 FPQILSSIELLQHSL 302 (307)
T ss_dssp HHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999998876543
No 61
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.6e-38 Score=368.39 Aligned_cols=266 Identities=25% Similarity=0.359 Sum_probs=217.2
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~ 882 (1141)
.+|++.+.||+|+||.||+|.+. +..||||+...............+...+.+|+.+++++ +||||+++++++....
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 46999999999999999999984 67899998765544344455555566678999999999 7999999999987654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||++|++|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+|||++
T Consensus 174 --------------~~~lv~e~~~g~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~ 234 (365)
T 2y7j_A 174 --------------FMFLVFDLMRKGELFDYLTE-----KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD 234 (365)
T ss_dssp --------------EEEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------EEEEEEEeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC
Confidence 45999999999999999976 24699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC--CCCCCchhhHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK--PNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~~~~s~ksDVWSLGviL~ 1040 (1141)
.+ +.+||+|||++..+..... .....||+.|+|||++.+... ...++.++|||||||++|
T Consensus 235 ~~-------~~ikl~DfG~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ 296 (365)
T 2y7j_A 235 DN-------MQIRLSDFGFSCHLEPGEK-----------LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296 (365)
T ss_dssp TT-------CCEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHH
T ss_pred CC-------CCEEEEecCcccccCCCcc-----------cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHH
Confidence 87 7899999999876543211 123469999999999875321 235789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|..||...........+..+........+ ...+..+.+++.+||+.||.+||
T Consensus 297 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~Rp 352 (365)
T 2y7j_A 297 TLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEW------------------------DDRSSTVKDLISRLLQVDPEARL 352 (365)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHH------------------------SSSCHHHHHHHHHHSCSSTTTSC
T ss_pred HHHHCCCCCCCCCHHHHHHHHHhCCCCCCCccc------------------------ccCCHHHHHHHHHHcCCChhHCc
Confidence 999999999887777766666554432211110 13456799999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001143 1121 TAGDLYEMFVAR 1132 (1141)
Q Consensus 1121 Sa~ElL~~L~~~ 1132 (1141)
|+.|+++|+|+.
T Consensus 353 s~~ell~hp~f~ 364 (365)
T 2y7j_A 353 TAEQALQHPFFE 364 (365)
T ss_dssp CHHHHHHSGGGC
T ss_pred CHHHHhcCcccC
Confidence 999999999986
No 62
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.5e-38 Score=369.54 Aligned_cols=262 Identities=23% Similarity=0.366 Sum_probs=208.8
Q ss_pred CCCCceEeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccc
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVE 873 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~---------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVk 873 (1141)
..++|++.+.||+|+||.||+|++.+ ..+|+|+.+ .. ......+. +.+|+.+++++ +||||++
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~----~~~E~~~l~~l~~hpnIv~ 151 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DD-ATEKDLSD----LVSEMEMMKMIGKHKNIIN 151 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECC--TT-CBHHHHHH----HHHHHHHHHHSCCCTTBCC
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEec--CC-cCHHHHHH----HHHHHHHHHHhcCCCCEee
Confidence 34679999999999999999998731 236666643 21 12233333 48999999999 8999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHH
Q 001143 874 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALV 942 (1141)
Q Consensus 874 llg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----------~~~~Ls~~~i~~Ia~QIa~gL~ 942 (1141)
+++++.+.+.+ |+||||+++|+|.+++...... ....+++.+++.++.||+.||+
T Consensus 152 ~~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 217 (370)
T 2psq_A 152 LLGACTQDGPL--------------YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGME 217 (370)
T ss_dssp EEEEECSSSSC--------------EEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEccCCCE--------------EEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 99999876544 9999999999999999863211 1235899999999999999999
Q ss_pred HHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001143 943 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1022 (1141)
Q Consensus 943 yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1022 (1141)
|||++||+||||||+|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+
T Consensus 218 ~LH~~~ivHrDlkp~NIll~~~-------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~--- 279 (370)
T 2psq_A 218 YLASQKCIHRDLAARNVLVTEN-------NVMKIADFGLARDINNIDYY--------KKTTNGRLPVKWMAPEALFD--- 279 (370)
T ss_dssp HHHHTTEECSCCCGGGEEECTT-------CCEEECCCSSCEETTCCCTT--------CTTTTTTSCGGGCCHHHHHT---
T ss_pred HHHhCCeeccccchhhEEECCC-------CCEEEccccCCcccCcccce--------ecccCCCcccceECHhHhcC---
Confidence 9999999999999999999887 78999999999765432211 11123357889999999976
Q ss_pred CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhH
Q 001143 1023 PNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1101 (1141)
Q Consensus 1023 ~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1141)
..++.++|||||||++|||++ |..||.+....++...+..+..+..+. .++
T Consensus 280 -~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~ 331 (370)
T 2psq_A 280 -RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------------------------NCT 331 (370)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT---------------------------TSC
T ss_pred -CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCC---------------------------CCC
Confidence 568999999999999999999 999999877777776665554332221 455
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1102 SFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1102 ~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
..+.+++.+||+.||.+|||+.|+++++...
T Consensus 332 ~~l~~li~~~l~~dP~~Rpt~~ell~~L~~i 362 (370)
T 2psq_A 332 NELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362 (370)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 6799999999999999999999999998764
No 63
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=8.5e-39 Score=363.65 Aligned_cols=284 Identities=21% Similarity=0.253 Sum_probs=205.2
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
...+|++.++||+|+||+||+|++.+..||+|++... ...... ..+|+.++++++||||+++++++.....
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-----~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~~ 92 (322)
T 3soc_A 22 QSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQ-----DKQSWQ----NEYEVYSLPGMKHENILQFIGAEKRGTS 92 (322)
T ss_dssp TTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGG-----GHHHHH----HHHHHHTSTTCCCTTBCCEEEEEEEECS
T ss_pred chhhchhhheecccCceEEEEEEECCCEEEEEEeecC-----chHHHH----HHHHHHHHhcCCCCCchhhcceeccCCC
Confidence 3567999999999999999999999999999986532 122222 2579999999999999999999986432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC----------CccccC
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK----------HIMHRD 953 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~----------gIvHrD 953 (1141)
.....++||||+++|+|.++++. ..+++..++.|+.||+.||.|||+. ||+|||
T Consensus 93 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~D 156 (322)
T 3soc_A 93 ----------VDVDLWLITAFHEKGSLSDFLKA------NVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRD 156 (322)
T ss_dssp ----------SSEEEEEEEECCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSC
T ss_pred ----------CCceEEEEEecCCCCCHHHHHHh------cCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCC
Confidence 12356999999999999999976 3599999999999999999999999 999999
Q ss_pred CCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC-CCCCCchhhH
Q 001143 954 IKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-PNLYGLEVDI 1032 (1141)
Q Consensus 954 LKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~~~~s~ksDV 1032 (1141)
|||+|||++.+ +.+||+|||+++........ .......||+.|+|||++.+... ...++.++||
T Consensus 157 lkp~Nill~~~-------~~~kL~DFg~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Di 221 (322)
T 3soc_A 157 IKSKNVLLKNN-------LTACIADFGLALKFEAGKSA--------GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDM 221 (322)
T ss_dssp CSGGGEEECTT-------CCEEECCCTTCEEECTTSCC--------CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHH
T ss_pred CChHhEEECCC-------CeEEEccCCcccccccccCc--------cccccCccCccccCHhhcccccccCcCCCccchh
Confidence 99999999887 78999999999765432211 11223569999999999875211 1234578999
Q ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001143 1033 WSYGCLLLELLTLQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1111 (1141)
Q Consensus 1033 WSLGviL~ELLTGk~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~c 1111 (1141)
|||||++|||++|+.||.+....... ........+............ ...............+..+.+|+.+|
T Consensus 222 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~li~~c 295 (322)
T 3soc_A 222 YAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHK------KKRPVLRDYWQKHAGMAMLCETIEEC 295 (322)
T ss_dssp HHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTS------CCCCCCCGGGGSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcc------cCCCCccccccccchHHHHHHHHHHH
Confidence 99999999999999999753221100 000001111111110000000 00000000001124567799999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhc
Q 001143 1112 TEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1112 L~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
|+.||++|||+.|+++.+....
T Consensus 296 l~~dP~~Rps~~ell~~L~~l~ 317 (322)
T 3soc_A 296 WDHDAEARLSAGCVGERITQMQ 317 (322)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999987653
No 64
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8e-39 Score=363.06 Aligned_cols=288 Identities=21% Similarity=0.314 Sum_probs=196.7
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
+..+|++.++||+|+||.||+|.+. +..+|+|+...... ....+ .+.+|+.++++++||||+++++++.+.
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~ 75 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE---EGTPS----TAIREISLMKELKHENIVRLYDVIHTE 75 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCST---TCSCH----HHHHHHHHHTTCCBTTBCCEEEEECCT
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc---cccHH----HHHHHHHHHHhcCCCCcceEEEEEEEC
Confidence 3568999999999999999999874 66788887654321 11112 237899999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
+ ..++||||++ ++|.+++...... ....+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 76 ~--------------~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl 140 (317)
T 2pmi_A 76 N--------------KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLL 140 (317)
T ss_dssp T--------------EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred C--------------eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeE
Confidence 4 3599999998 6999998763321 2235899999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||+++....... ......||+.|+|||++.+ ...++.++|||||||++|
T Consensus 141 ~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~ 200 (317)
T 2pmi_A 141 INKR-------GQLKLGDFGLARAFGIPVN----------TFSSEVVTLWYRAPDVLMG---SRTYSTSIDIWSCGCILA 200 (317)
T ss_dssp ECTT-------CCEEECCCSSCEETTSCCC----------CCCCCCSCCTTCCHHHHTT---CCCCCTHHHHHHHHHHHH
T ss_pred EcCC-------CCEEECcCccceecCCCcc----------cCCCCcccccccCchHhhC---CCCCCcHHHHHHHHHHHH
Confidence 9887 7899999999976543211 1123468999999999875 235789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHh--CCCCC-chhHHhhhccCcccccccc-CCCCC---CchhhhhhHHHHHHHHHHhcc
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQM--GKRPR-LTDELEALGSCHEHEVAQS-GSGFE---KPEAELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~--~~~p~-l~~~l~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~L~dLI~~cL~ 1113 (1141)
+|++|+.||.+.+..+....+.. +..+. ............ ...... ..... .+......+.++.+||.+||+
T Consensus 201 el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 279 (317)
T 2pmi_A 201 EMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYN-PNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQ 279 (317)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCC-TTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSC
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcc-cccccccchhHHHhhcccccccCCHHHHHHHHHHCC
Confidence 99999999998877776655532 11111 100000000000 000000 00000 000011356789999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001143 1114 ENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.||++|||+.|+++|+|+...
T Consensus 280 ~dP~~Rpt~~e~l~hp~f~~~ 300 (317)
T 2pmi_A 280 LNPDMRLSAKQALHHPWFAEY 300 (317)
T ss_dssp SSGGGSCCHHHHTTSGGGGGG
T ss_pred CCcccCCCHHHHhCChhhhcc
Confidence 999999999999999999853
No 65
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.3e-39 Score=355.11 Aligned_cols=258 Identities=23% Similarity=0.285 Sum_probs=190.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+.+|++.++||+|+||.||+|.+ .+..+|+|+...... .. .....++.+|+.++++++||||+++++++.+
T Consensus 10 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 84 (275)
T 2eue_A 10 AHIGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVL--AK---SDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp CBCCCBCCCC---------EEEEECTTTCCEEEEEEECSCC----------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CcccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhc--ch---HHHHHHHHHHHHHHHhCCCCCeEEEEEEEec
Confidence 4467899999999999999999987 466788887643321 11 1122344799999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.+. .++||||+ +++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+
T Consensus 85 ~~~--------------~~lv~e~~-~~~l~~~~~~-----~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil 144 (275)
T 2eue_A 85 KDE--------------IIMVIEYA-GNELFDYIVQ-----RDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLL 144 (275)
T ss_dssp SSC--------------EEEEEECC-CEEHHHHHHT-----SSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEE
T ss_pred CCe--------------EEEEehhc-CCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEE
Confidence 553 49999999 5888888865 346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||++....... ......||+.|+|||++.+. ...+.++|||||||++|
T Consensus 145 ~~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~t~~y~aPE~~~~~---~~~~~~~Di~slG~il~ 203 (275)
T 2eue_A 145 LDEH-------LNVKIADFGLSNIMTDGN-----------FLKTSCGSPNYAAPEVISGK---LYAGPEVDVWSCGVILY 203 (275)
T ss_dssp ECTT-------SCEEECCSSCC--------------------------CTTCCHHHHCC--------THHHHHHHHHHHH
T ss_pred ECCC-------CCEEEeecccceeccCcc-----------cccCCCCCcCcCCceeeeCC---CCCCcccchHHHHHHHH
Confidence 9887 789999999997544321 11234589999999998762 23368999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|+.||.+.........+..+.... + ...++.+.+++.+||+.||.+||
T Consensus 204 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~~~~li~~~l~~dP~~Rp 255 (275)
T 2eue_A 204 VMLCRRLPFDDESIPVLFKNISNGVYTL-P---------------------------KFLSPGAAGLIKRMLIVNPLNRI 255 (275)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHTCCCC-C---------------------------TTSCHHHHHHHHHHSCSSGGGSC
T ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCC-C---------------------------ccCCHHHHHHHHHHhhcCHhHCC
Confidence 9999999999887777666665443211 1 13456789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
|+.|+++|+|++..
T Consensus 256 s~~e~l~h~~f~~~ 269 (275)
T 2eue_A 256 SIHEIMQDDWFKVD 269 (275)
T ss_dssp CHHHHTTCHHHHTT
T ss_pred CHHHHhhCCeeccc
Confidence 99999999999864
No 66
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.1e-38 Score=354.73 Aligned_cols=260 Identities=22% Similarity=0.258 Sum_probs=210.4
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+++|++.+.||+|+||.||+|.+. +..+|+|+..... .........+.+|+.++++++||||+++++++.
T Consensus 10 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~ 84 (284)
T 2vgo_A 10 KFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQ-----LEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 84 (284)
T ss_dssp CCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred chhhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccc-----cchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEE
Confidence 345678999999999999999999985 4457777754221 111222334589999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.. ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus 85 ~~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Ni 145 (284)
T 2vgo_A 85 DRK--------------RIYLMLEFAPRGELYKELQKH-----GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENL 145 (284)
T ss_dssp CSS--------------EEEEEECCCTTEEHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGE
T ss_pred cCC--------------EEEEEEEeCCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHE
Confidence 654 359999999999999999762 3689999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.+||+|||++....... .....||+.|+|||++.+ ..++.++||||||+++
T Consensus 146 l~~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 202 (284)
T 2vgo_A 146 LMGYK-------GELKIADFGWSVHAPSLR------------RRTMCGTLDYLPPEMIEG----KTHDEKVDLWCAGVLC 202 (284)
T ss_dssp EECTT-------CCEEECCCTTCEECSSSC------------BCCCCSCGGGCCHHHHTT----CCBCTTHHHHHHHHHH
T ss_pred EEcCC-------CCEEEecccccccCcccc------------cccccCCCCcCCHHHhcc----CCCCcccchhhHHHHH
Confidence 99887 789999999986543211 123468999999999886 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|..||......+....+...... ++ ...+..+.++|.+||+.||.+|
T Consensus 203 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~~p~~R 254 (284)
T 2vgo_A 203 YEFLVGMPPFDSPSHTETHRRIVNVDLK-FP---------------------------PFLSDGSKDLISKLLRYHPPQR 254 (284)
T ss_dssp HHHHHSSCTTCCSSHHHHHHHHHTTCCC-CC---------------------------TTSCHHHHHHHHHHSCSSGGGS
T ss_pred HHHHHCCCCCCCCCHhHHHHHHhccccC-CC---------------------------CcCCHHHHHHHHHHhhcCHhhC
Confidence 9999999999887776665555432211 10 1345678999999999999999
Q ss_pred CCHHHHHHHHHhhcCCC
Q 001143 1120 PTAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~s~ 1136 (1141)
||+.++++|+|+.....
T Consensus 255 ps~~~ll~h~~~~~~~~ 271 (284)
T 2vgo_A 255 LPLKGVMEHPWVKANSR 271 (284)
T ss_dssp CCHHHHHTCHHHHHHCC
T ss_pred CCHHHHhhCHHHHhhcc
Confidence 99999999999986543
No 67
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.6e-39 Score=373.43 Aligned_cols=293 Identities=19% Similarity=0.251 Sum_probs=201.4
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~ 881 (1141)
..+|++.++||+|+||.||+|.+. +..||+|+.. .........+.+ .+|+.++.++. ||||+++++++...
T Consensus 8 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~--~~~~~~~~~~~~----~~E~~~l~~l~~h~niv~l~~~~~~~ 81 (388)
T 3oz6_A 8 LRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIF--DAFQNSTDAQRT----FREIMILTELSGHENIVNLLNVLRAD 81 (388)
T ss_dssp HTTEEEEEC-------CEEEEEETTTCCEEEEEEEC--C--CCHHHHHHH----HHHHHHHHHTTTCTTBCCEEEEEECT
T ss_pred cCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEec--ccccChHHHHHH----HHHHHHHHhccCCCCCCeeeeEEecC
Confidence 468999999999999999999985 5667777643 222333333333 79999999997 99999999998753
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+. ...|+||||++ ++|..+++. ..+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 82 ~~------------~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll 142 (388)
T 3oz6_A 82 ND------------RDVYLVFDYME-TDLHAVIRA------NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL 142 (388)
T ss_dssp TS------------SCEEEEEECCS-EEHHHHHHH------TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred CC------------CEEEEEecccC-cCHHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE
Confidence 31 24699999997 699999875 369999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeecccccccccccccccc-----------ccCCCCCCCCccCCCcccchhhhccccCCCCCCchh
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI-----------AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1030 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~-----------~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1030 (1141)
+.+ +.+||+|||+|+.+......... ...........+||+.|+|||++.+ ...++.++
T Consensus 143 ~~~-------~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~ 212 (388)
T 3oz6_A 143 NAE-------CHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLG---STKYTKGI 212 (388)
T ss_dssp CTT-------CCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTT---CCCCCTHH
T ss_pred cCC-------CCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcC---CCCCCChh
Confidence 887 88999999999865431110000 0001112234579999999999875 24688999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccc----cc----cCCCCCC--ch----
Q 001143 1031 DIWSYGCLLLELLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEV----AQ----SGSGFEK--PE---- 1095 (1141)
Q Consensus 1031 DVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~----~~----~~~~~~~--~~---- 1095 (1141)
|||||||++|||++|++||.+.+..+....+.. ...|... .+........... .. ....... +.
T Consensus 213 DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (388)
T 3oz6_A 213 DMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNE-DVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL 291 (388)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHH-HHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH-HHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhh
Confidence 999999999999999999998887776666532 2222211 1111000000000 00 0000000 00
Q ss_pred -----hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1096 -----AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1096 -----~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.....++++.+|+.+||+.||.+|||++|+++|+|+..
T Consensus 292 ~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~ 334 (388)
T 3oz6_A 292 LLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI 334 (388)
T ss_dssp HHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTT
T ss_pred cccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHH
Confidence 00144678999999999999999999999999999863
No 68
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=9.1e-39 Score=362.73 Aligned_cols=265 Identities=22% Similarity=0.264 Sum_probs=210.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+.|++.+.||+|+||.||+|++. +..+|+|+........... ......+.+|+.++++++||||+++++++.+..
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 88 (321)
T 2a2a_A 12 DFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRR--GVSREEIEREVSILRQVLHHNVITLHDVYENRT- 88 (321)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSS--SBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred ccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEeccccccccc--chhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-
Confidence 35899999999999999999984 6678888865443221110 001123479999999999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 89 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~ 150 (321)
T 2a2a_A 89 -------------DVVLILELVSGGELFDFLAQ-----KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLD 150 (321)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHT-----CSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESC
T ss_pred -------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEec
Confidence 35999999999999999975 346999999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
++. ....+||+|||++....... ......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 151 ~~~---~~~~~kl~Dfg~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 212 (321)
T 2a2a_A 151 KNI---PIPHIKLIDFGLAHEIEDGV-----------EFKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYILL 212 (321)
T ss_dssp TTS---SSCCEEECCCTTCEECCTTC-----------CCCCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CCC---CcCCEEEccCccceecCccc-----------cccccCCCCCccCcccccC----CCCCCccccHHHHHHHHHHH
Confidence 621 11279999999997654321 1123468999999999876 56789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||.+....+....+.......... .....+..+.++|.+||+.||.+|||+.
T Consensus 213 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ 268 (321)
T 2a2a_A 213 SGASPFLGDTKQETLANITSVSYDFDEE------------------------FFSHTSELAKDFIRKLLVKETRKRLTIQ 268 (321)
T ss_dssp HSCCSSCCSSHHHHHHHHHTTCCCCCHH------------------------HHTTCCHHHHHHHHTTSCSSTTTSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHhcccccChh------------------------hhcccCHHHHHHHHHHcCCChhhCcCHH
Confidence 9999999887777776665443321111 1114556799999999999999999999
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
|+++|+|+..
T Consensus 269 e~l~hp~~~~ 278 (321)
T 2a2a_A 269 EALRHPWITP 278 (321)
T ss_dssp HHHHSTTTSC
T ss_pred HHhcCccccC
Confidence 9999999864
No 69
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.5e-38 Score=354.97 Aligned_cols=260 Identities=24% Similarity=0.352 Sum_probs=201.6
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~ 885 (1141)
..|++.+.||+|+||.||+|.+......++++.+..........+.+ .+|+.++++++||||+++++++.....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~~-- 99 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRF----KEEAEMLKGLQHPNIVRFYDSWESTVK-- 99 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEEEEESS--
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHH----HHHHHHHHhCCCCCeeeeeeeeccccC--
Confidence 34899999999999999999986555444443343333333333444 899999999999999999999875321
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCCeeee-
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENILID- 962 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g--IvHrDLKP~NILld- 962 (1141)
.....++||||+++++|.+++.. ...+++..++.|+.||+.||.|||++| |+||||||+|||++
T Consensus 100 --------~~~~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~ 166 (290)
T 1t4h_A 100 --------GKKCIVLVTELMTSGTLKTYLKR-----FKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG 166 (290)
T ss_dssp --------SCEEEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS
T ss_pred --------CCceEEEEEEecCCCCHHHHHHH-----ccCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC
Confidence 12356999999999999999976 246899999999999999999999999 99999999999997
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++....... .....||+.|+|||++.+ .++.++|||||||++|+|
T Consensus 167 ~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~~l~~l 222 (290)
T 1t4h_A 167 PT-------GSVKIGDLGLATLKRASF------------AKAVIGTPEFMAPEMYEE-----KYDESVDVYAFGMCMLEM 222 (290)
T ss_dssp TT-------SCEEECCTTGGGGCCTTS------------BEESCSSCCCCCGGGGGT-----CCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeCCCcccccccc------------cccccCCcCcCCHHHHhc-----cCCCcchHHHHHHHHHHH
Confidence 44 789999999986543211 123458999999998864 478999999999999999
Q ss_pred HhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LTGk~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++|+.||..... .+....+..+..+.. .....++.+.+++.+||+.||.+|||
T Consensus 223 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~l~~li~~~l~~dp~~Rps 276 (290)
T 1t4h_A 223 ATSEYPYSECQNAAQIYRRVTSGVKPAS--------------------------FDKVAIPEVKEIIEGCIRQNKDERYS 276 (290)
T ss_dssp HHSSCTTTTCSSHHHHHHHHTTTCCCGG--------------------------GGGCCCHHHHHHHHHHSCSSGGGSCC
T ss_pred HhCCCCCCCcCcHHHHHHHHhccCCccc--------------------------cCCCCCHHHHHHHHHHccCChhhCCC
Confidence 999999987443 334444433322211 11134467999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
+.|+++|+|+...
T Consensus 277 ~~ell~h~~f~~~ 289 (290)
T 1t4h_A 277 IKDLLNHAFFQEE 289 (290)
T ss_dssp HHHHHTSGGGC--
T ss_pred HHHHhhCcccccC
Confidence 9999999999754
No 70
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.4e-39 Score=366.94 Aligned_cols=291 Identities=22% Similarity=0.267 Sum_probs=211.7
Q ss_pred CCCCCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 799 GLDPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 799 ~~~~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
.+....+++|++.+.||+|+||.||+|++. +..||+|+.... .......+ .+.+|+.++++++||||+++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~ 91 (331)
T 4aaa_A 18 NLYFQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLES--DDDKMVKK----IAMREIKLLKQLRHENLVNLLE 91 (331)
T ss_dssp -CCCBCGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESC--SSCHHHHH----HHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhhhhhhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecC--CCchHHHH----HHHHHHHHHhhCCCCCEeeEEE
Confidence 455667889999999999999999999985 567888875422 22222223 3479999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
++.+.. ..++||||+++++|..++.. ...+++..+..|+.||+.||.|||++||+||||||
T Consensus 92 ~~~~~~--------------~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp 152 (331)
T 4aaa_A 92 VCKKKK--------------RWYLVFEFVDHTILDDLELF-----PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKP 152 (331)
T ss_dssp EEEETT--------------EEEEEEECCSEEHHHHHHHS-----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCG
T ss_pred EeecCC--------------EEEEEEecCCcchHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcCh
Confidence 998655 34999999999888887654 34699999999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
+|||++.+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++||||||
T Consensus 153 ~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~Di~slG 212 (331)
T 4aaa_A 153 ENILVSQS-------GVVKLCDFGFARTLAAPGE----------VYDDEVATRWYRAPELLVG---DVKYGKAVDVWAIG 212 (331)
T ss_dssp GGEEECTT-------SCEEECCCTTC----------------------CCCCCTTCCHHHHTT---CTTCCTHHHHHHHH
T ss_pred heEEEcCC-------CcEEEEeCCCceeecCCcc----------ccCCCcCCccccCcccccC---CCCcchHHHHHHHH
Confidence 99999887 7899999999976543211 1123468999999999875 23678999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHh---hhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001143 1037 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELE---ALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~ 1113 (1141)
|++|+|++|+.||.+....+....+........+.... ..........................++.+.+|+.+||+
T Consensus 213 ~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~ 292 (331)
T 4aaa_A 213 CLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLH 292 (331)
T ss_dssp HHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTC
T ss_pred HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhc
Confidence 99999999999999877766554442222111111111 100000000000000000111122567889999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001143 1114 ENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.||.+|||+.|+++|+|+...
T Consensus 293 ~dP~~Rpt~~ell~hp~f~~~ 313 (331)
T 4aaa_A 293 IDPDKRPFCAELLHHDFFQMD 313 (331)
T ss_dssp SSGGGSCCGGGGGGSHHHHGG
T ss_pred cCcccCCCHHHHhcCchhccC
Confidence 999999999999999999753
No 71
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=8e-39 Score=372.56 Aligned_cols=259 Identities=23% Similarity=0.287 Sum_probs=203.7
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHH-HhhCCCCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM-LGALRHSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~i-L~~L~HpNIVkllg~~ 878 (1141)
.....+|++.+.||+|+||.||+|++. +..+|+|+......... ..... +.+|..+ ++.++||||+++++++
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~-~~~~~----~~~e~~~ll~~~~hp~Iv~l~~~~ 108 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKK-KEEKH----IMSERNVLLKNVKHPFLVGLHFSF 108 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC------------------CCBCCCCCTTBCCEEEEE
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhh-HHHHH----HHHHHHHHHHhCCCCCCCCEEEEE
Confidence 455778999999999999999999985 45678887654322111 11222 2567776 4678999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.+ ..|+||||++||+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|
T Consensus 109 ~~~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~N 169 (373)
T 2r5t_A 109 QTAD--------------KLYFVLDYINGGELFYHLQR-----ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPEN 169 (373)
T ss_dssp ECSS--------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred EeCC--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHH
Confidence 8755 45999999999999999976 2468999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||+
T Consensus 170 Ill~~~-------g~ikL~DFG~a~~~~~~~----------~~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~i 228 (373)
T 2r5t_A 170 ILLDSQ-------GHIVLTDFGLCKENIEHN----------STTSTFCGTPEYLAPEVLHK----QPYDRTVDWWCLGAV 228 (373)
T ss_dssp EEECTT-------SCEEECCCCBCGGGBCCC----------CCCCSBSCCCCCCCHHHHTT----CCCCTHHHHHHHHHH
T ss_pred EEECCC-------CCEEEeeCccccccccCC----------CccccccCCccccCHHHhCC----CCCCchhhhHHHHHH
Confidence 999987 889999999997532211 11234579999999999976 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|||++|..||.+.+..++...+...... ++ ...+..+.+||.+||+.||.+
T Consensus 229 l~ell~G~~Pf~~~~~~~~~~~i~~~~~~-~~---------------------------~~~~~~~~~li~~lL~~dp~~ 280 (373)
T 2r5t_A 229 LYEMLYGLPPFYSRNTAEMYDNILNKPLQ-LK---------------------------PNITNSARHLLEGLLQKDRTK 280 (373)
T ss_dssp HHHHHHSSCTTCCSBHHHHHHHHHHSCCC-CC---------------------------SSSCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHhcccC-CC---------------------------CCCCHHHHHHHHHHcccCHHh
Confidence 99999999999988887777776543221 10 134567999999999999999
Q ss_pred CCCH----HHHHHHHHhhc
Q 001143 1119 RPTA----GDLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa----~ElL~~L~~~~ 1133 (1141)
||++ .++++|+||..
T Consensus 281 R~~~~~~~~~i~~h~~f~~ 299 (373)
T 2r5t_A 281 RLGAKDDFMEIKSHVFFSL 299 (373)
T ss_dssp STTTTTTHHHHHTSGGGTT
T ss_pred CCCCCCCHHHHhCCccccC
Confidence 9986 69999999864
No 72
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=9e-39 Score=370.78 Aligned_cols=268 Identities=21% Similarity=0.331 Sum_probs=212.8
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccce
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 874 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl 874 (1141)
.....+|++.++||+|+||.||+|.+. +..||+|+.. .. ........ +.+|+.++++++||||+++
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~----~~~E~~~l~~l~hpnIv~~ 139 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP--EV-CSEQDELD----FLMEALIISKFNHQNIVRC 139 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECC--SS-CCHHHHHH----HHHHHHHHHHCCCTTBCCE
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecc--cc-cChhhHHH----HHHHHHHHHhCCCCCCCeE
Confidence 345678999999999999999999963 3357777642 21 12233333 3789999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHIMHR 952 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~--~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHr 952 (1141)
++++.+.... ++||||+++|+|.++++..... ....+++..++.|+.||+.||.|||++||+||
T Consensus 140 ~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHr 205 (367)
T 3l9p_A 140 IGVSLQSLPR--------------FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHR 205 (367)
T ss_dssp EEEECSSSSC--------------EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred EEEEecCCCC--------------EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCC
Confidence 9999865543 9999999999999999874321 22459999999999999999999999999999
Q ss_pred CCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001143 953 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1032 (1141)
Q Consensus 953 DLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1032 (1141)
||||+|||++.++ ....+||+|||+++.+...... .......||+.|+|||++.+ ..++.++||
T Consensus 206 Dlkp~NIll~~~~----~~~~~kL~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Dv 269 (367)
T 3l9p_A 206 DIAARNCLLTCPG----PGRVAKIGDFGMARDIYRAGYY--------RKGGCAMLPVKWMPPEAFME----GIFTSKTDT 269 (367)
T ss_dssp CCCGGGEEESCSS----TTCCEEECCCHHHHHHHHHSSC--------TTCCGGGSCGGGCCHHHHHH----CCCCHHHHH
T ss_pred CCChhhEEEecCC----CCceEEECCCcccccccccccc--------ccCCCcCCcccEECHHHhcC----CCCCcHHHH
Confidence 9999999998541 1146999999999754332111 11223468999999999976 568899999
Q ss_pred HHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001143 1033 WSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1111 (1141)
Q Consensus 1033 WSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~c 1111 (1141)
|||||++|||++ |..||.+....++...+..+..+..+. .++..+.+|+.+|
T Consensus 270 wslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~ 322 (367)
T 3l9p_A 270 WSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK---------------------------NCPGPVYRIMTQC 322 (367)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHH
Confidence 999999999998 999999888888877776655433221 4456799999999
Q ss_pred cccCCCCCCCHHHHHHHHHhhc
Q 001143 1112 TEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1112 L~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
|+.||.+|||+.+|++++++..
T Consensus 323 l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 323 WQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp TCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCHhHCcCHHHHHHHHHHHh
Confidence 9999999999999999998864
No 73
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=1.3e-38 Score=355.30 Aligned_cols=261 Identities=22% Similarity=0.287 Sum_probs=204.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|.+.++||+|+||.||+|.+. +..+++|+........ ..+. +.+|+.++++++||||+++++++.+..
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~---~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~~- 93 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQV---PMEQ----IEAEIEVLKSLDHPNIIKIFEVFEDYH- 93 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCS---CHHH----HHHHHHHHHTCCCTTBCCEEEEEECSS-
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccch---hHHH----HHHHHHHHHhCCCchHHhHHHheecCC-
Confidence 46999999999999999999985 5567777765432211 1223 378999999999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++...... ...+++..++.|+.||+.||+|||++||+||||||+||+++.
T Consensus 94 -------------~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~ 159 (285)
T 3is5_A 94 -------------NMYIVMETCEGGELLERIVSAQAR-GKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQD 159 (285)
T ss_dssp -------------EEEEEECCCSCCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESS
T ss_pred -------------eEEEEEEeCCCCcHHHHHHhhhhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEec
Confidence 359999999999999999764333 346999999999999999999999999999999999999964
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+. ..+.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|+|+
T Consensus 160 ~~----~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~~-----~~~~~~Di~slG~il~~ll 219 (285)
T 3is5_A 160 TS----PHSPIKIIDFGLAELFKSDE-----------HSTNAAGTALYMAPEVFKR-----DVTFKCDIWSAGVVMYFLL 219 (285)
T ss_dssp SS----TTCCEEECCCCCCCC---------------------CTTGGGCCHHHHTT-----CCCHHHHHHHHHHHHHHHH
T ss_pred CC----CCCCEEEEeeecceecCCcc-----------cCcCcccccCcCChHHhcc-----CCCcccCeehHHHHHHHHH
Confidence 31 12679999999997654321 1123468999999999864 5789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|+.||.+....+....+.......... ....++.+.+++.+||+.||.+|||+.
T Consensus 220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~li~~~L~~dP~~Rps~~ 274 (285)
T 3is5_A 220 TGCLPFTGTSLEEVQQKATYKEPNYAVE-------------------------CRPLTPQAVDLLKQMLTKDPERRPSAA 274 (285)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCC---------------------------CCCCHHHHHHHHHHTCSCTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHhhhccCCcccccc-------------------------cCcCCHHHHHHHHHHccCChhhCcCHH
Confidence 9999999877776665554332211100 002456789999999999999999999
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
|+++|+|++.
T Consensus 275 e~l~hp~f~~ 284 (285)
T 3is5_A 275 QVLHHEWFKQ 284 (285)
T ss_dssp HHHTSGGGGC
T ss_pred HHhcCHHhhc
Confidence 9999999975
No 74
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=7.3e-39 Score=374.66 Aligned_cols=260 Identities=21% Similarity=0.279 Sum_probs=209.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.+.|++.+.||+|+||.||+|.+. +..+|+|+.... ...... .+.+|+.++++++||||+++++++.+..
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~----~~~~~~----~~~~E~~il~~l~hpnIv~~~~~~~~~~ 121 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTP----YPLDKY----TVKNEISIMNQLHHPKLINLHDAFEDKY 121 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC----SHHHHH----HHHHHHHHHTTCCSTTBCCEEEEEECSS
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEeccc----chhhHH----HHHHHHHHHHhCCCcCCCeEEEEEEeCC
Confidence 457999999999999999999985 556777775422 122222 3479999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 122 --------------~~~lv~E~~~gg~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~ 183 (387)
T 1kob_A 122 --------------EMVLILEFLSGGELFDRIAA----EDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCE 183 (387)
T ss_dssp --------------EEEEEEECCCCCBHHHHTTC----TTCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEES
T ss_pred --------------EEEEEEEcCCCCcHHHHHHh----hcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEe
Confidence 35999999999999998864 234699999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+.. +.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 184 ~~~~-----~~vkL~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG~il~el 243 (387)
T 1kob_A 184 TKKA-----SSVKIIDFGLATKLNPDEI-----------VKVTTATAEFAAPEIVDR----EPVGFYTDMWAIGVLGYVL 243 (387)
T ss_dssp STTC-----CCEEECCCTTCEECCTTSC-----------EEEECSSGGGCCHHHHTT----CCBCHHHHHHHHHHHHHHH
T ss_pred cCCC-----CceEEEecccceecCCCcc-----------eeeeccCCCccCchhccC----CCCCCcccEeeHhHHHHHH
Confidence 5421 6799999999976543211 113468999999999976 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|..||.+.+..+....+.......... .....++++.+||.+||+.||.+|||+
T Consensus 244 ltg~~Pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~~dP~~Rpt~ 299 (387)
T 1kob_A 244 LSGLSPFAGEDDLETLQNVKRCDWEFDED------------------------AFSSVSPEAKDFIKNLLQKEPRKRLTV 299 (387)
T ss_dssp HHSCCSSCCSSHHHHHHHHHHCCCCCCSS------------------------TTTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCCcc------------------------ccccCCHHHHHHHHHHcCCChhHCcCH
Confidence 99999999887777766665443211100 001456779999999999999999999
Q ss_pred HHHHHHHHhhcC
Q 001143 1123 GDLYEMFVARTS 1134 (1141)
Q Consensus 1123 ~ElL~~L~~~~~ 1134 (1141)
.|+++|+|+...
T Consensus 300 ~ell~hp~~~~~ 311 (387)
T 1kob_A 300 HDALEHPWLKGD 311 (387)
T ss_dssp HHHHTSTTTSSC
T ss_pred HHHhhCccccCC
Confidence 999999999754
No 75
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-38 Score=369.20 Aligned_cols=285 Identities=20% Similarity=0.241 Sum_probs=205.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||.||+|.+. +..||+|+ +..........+ ++.+|+.++++++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~--~~~~~~~~~~~~----~~~~E~~~l~~l~hpnIv~l~~~~~~~~ 97 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKK--LYRPFQSELFAK----RAYRELRLLKHMRHENVIGLLDVFTPDE 97 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEE--CSSTTSSHHHHH----HHHHHHHHHHHCCBTTBCCCSEEECSCS
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEE--eCccccCHHHHH----HHHHHHHHHHhCCCcCCCCceeeEecCC
Confidence 457999999999999999999985 55666665 333222333233 3489999999999999999999987653
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ......|+||||+ +++|.++++. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 98 ~~--------~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~ 162 (367)
T 1cm8_A 98 TL--------DDFTDFYLVMPFM-GTDLGKLMKH------EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN 162 (367)
T ss_dssp ST--------TTCCCCEEEEECC-SEEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred cc--------ccCceEEEEEecC-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEc
Confidence 22 1223459999999 7999999875 3689999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++..... ....++|+.|+|||++.+ ...++.++||||+||++|+|
T Consensus 163 ~~-------~~~kl~Dfg~a~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el 219 (367)
T 1cm8_A 163 ED-------CELKILDFGLARQADSE-------------MTGYVVTRWYRAPEVILN---WMRYTQTVDIWSVGCIMAEM 219 (367)
T ss_dssp TT-------CCEEECCCTTCEECCSS-------------CCSSCSCGGGCCTHHHHT---TTCCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEeeecccccccc-------------cCcCcCCCCcCCHHHHhC---CCCCChhhhHHHHHHHHHHH
Confidence 87 78999999999764321 123468999999999875 24678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCcccccccc---CCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQS---GSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
++|+.||.+.+..+....+.. ...+. .................. .............++.+.+|+.+||+.||.+
T Consensus 220 l~g~~pf~~~~~~~~l~~i~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~ 298 (367)
T 1cm8_A 220 ITGKTLFKGSDHLDQLKEIMKVTGTPP-AEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQ 298 (367)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHHCCCC-HHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTT
T ss_pred HhCCCCCCCCCHHHHHHHHHHhcCCCC-HHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhH
Confidence 999999998887776665533 22222 111111100000000000 0000011111245678999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
|||+.|+++|+|+..-
T Consensus 299 R~t~~e~l~hp~f~~~ 314 (367)
T 1cm8_A 299 RVTAGEALAHPYFESL 314 (367)
T ss_dssp SCCHHHHHHSGGGTTT
T ss_pred CCCHHHHhcChHHHhh
Confidence 9999999999999753
No 76
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=1.3e-38 Score=372.15 Aligned_cols=261 Identities=22% Similarity=0.300 Sum_probs=207.3
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+++|++.+.||+|+||.||+|.+. +..+|+|+...... ........+.+|+.++++++|||||++++++.
T Consensus 11 ~v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~-----~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~ 85 (384)
T 4fr4_A 11 DVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKC-----VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQ 85 (384)
T ss_dssp CCCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhc-----ccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 455788999999999999999999985 45588887543211 11111234479999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.. ..|+||||++||+|..++.. ...+++..++.|+.||+.||.|||++||+||||||+||
T Consensus 86 ~~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NI 146 (384)
T 4fr4_A 86 DEE--------------DMFMVVDLLLGGDLRYHLQQ-----NVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNI 146 (384)
T ss_dssp CSS--------------EEEEEECCCTTEEHHHHHHT-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred eCC--------------EEEEEEecCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHe
Confidence 755 34999999999999999975 34699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||+++.+.... ......||+.|+|||++.+.. ...++.++|||||||++
T Consensus 147 ll~~~-------g~vkL~DFG~a~~~~~~~-----------~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~il 207 (384)
T 4fr4_A 147 LLDEH-------GHVHITDFNIAAMLPRET-----------QITTMAGTKPYMAPEMFSSRK-GAGYSFAVDWWSLGVTA 207 (384)
T ss_dssp EECTT-------SCEEECCCTTCEECCTTC-----------CBCCCCSCGGGCCGGGTCCCS-SCCBCTTHHHHHHHHHH
T ss_pred EECCC-------CCEEEeccceeeeccCCC-----------ceeccCCCccccCCeeeccCC-CCCCCccceeechHHHH
Confidence 99987 889999999997654321 112456999999999987421 24578999999999999
Q ss_pred HHHHhCCCCCCCC---CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1040 LELLTLQVPYMGL---SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~---~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|+|++|+.||... ...+....+...... .+ ...+..+.+||.+||+.||
T Consensus 208 ~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~dP 259 (384)
T 4fr4_A 208 YELLRGRRPYHIRSSTSSKEIVHTFETTVVT-YP---------------------------SAWSQEMVSLLKKLLEPNP 259 (384)
T ss_dssp HHHHHSSCSSCCCTTSCHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHSCSSG
T ss_pred HHHHhCCCCCCCCCCccHHHHHHHHhhcccC-CC---------------------------CcCCHHHHHHHHHHhcCCH
Confidence 9999999999743 233333333322211 10 1445679999999999999
Q ss_pred CCCCC-HHHHHHHHHhhc
Q 001143 1117 TERPT-AGDLYEMFVART 1133 (1141)
Q Consensus 1117 ~~RPS-a~ElL~~L~~~~ 1133 (1141)
.+||+ ++++++|+|+..
T Consensus 260 ~~R~s~~~~l~~hp~f~~ 277 (384)
T 4fr4_A 260 DQRFSQLSDVQNFPYMND 277 (384)
T ss_dssp GGSCCSHHHHHTSGGGTT
T ss_pred hHhcccHHHHHcChhhhc
Confidence 99998 999999999964
No 77
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.9e-38 Score=361.99 Aligned_cols=264 Identities=23% Similarity=0.372 Sum_probs=211.4
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
...+|++.+.||+|+||.||+|++.+ ..+|+|+.... ......+ .+.+|+.++++++||||+++++
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~----~~~~E~~~l~~l~hp~iv~~~~ 117 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE---ASADMQA----DFQREAALMAEFDNPNIVKLLG 117 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT---CCHHHHH----HHHHHHHHHHTCCCTTBCCEEE
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc---cCHHHHH----HHHHHHHHHHhCCCCCEEEEEE
Confidence 35679999999999999999999854 56777764321 1222233 3489999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-------------------CCCCCCHHHHHHHHHHH
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-------------------GEKHVSVKLALFIAQDV 937 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-------------------~~~~Ls~~~i~~Ia~QI 937 (1141)
++.+.... ++||||+++++|.+++...... ....+++.+++.|+.||
T Consensus 118 ~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 183 (343)
T 1luf_A 118 VCAVGKPM--------------CLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQV 183 (343)
T ss_dssp EECSSSSC--------------EEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHH
T ss_pred EEccCCce--------------EEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHH
Confidence 99865543 9999999999999999863211 12579999999999999
Q ss_pred HHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhh
Q 001143 938 AAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVL 1017 (1141)
Q Consensus 938 a~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 1017 (1141)
+.||.|||++||+||||||+|||++.+ +.+||+|||++......... .......+|+.|+|||++
T Consensus 184 ~~~l~~LH~~~ivH~Dlkp~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~t~~y~aPE~~ 248 (343)
T 1luf_A 184 AAGMAYLSERKFVHRDLATRNCLVGEN-------MVVKIADFGLSRNIYSADYY--------KADGNDAIPIRWMPPESI 248 (343)
T ss_dssp HHHHHHHHHTTCCCSCCSGGGEEECGG-------GCEEECCCSCHHHHTGGGCB--------C----CCBCGGGCCHHHH
T ss_pred HHHHHHHHhCCeecCCCCcceEEECCC-------CeEEEeecCCCcccccCccc--------cccCCCcccceecChhhh
Confidence 999999999999999999999999987 78999999999765432211 111234578999999999
Q ss_pred ccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchh
Q 001143 1018 RAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA 1096 (1141)
Q Consensus 1018 ~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1141)
.+ ..++.++|||||||++|+|++ |..||.+....++...+..+..+..+.
T Consensus 249 ~~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------- 299 (343)
T 1luf_A 249 FY----NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPE------------------------- 299 (343)
T ss_dssp HH----CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCT-------------------------
T ss_pred cc----CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcCCCCC-------------------------
Confidence 86 568899999999999999999 999999888877777766554432221
Q ss_pred hhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1097 ELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1097 ~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.++..+.+++.+||+.||.+|||+.++++++.....
T Consensus 300 --~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~ 335 (343)
T 1luf_A 300 --NCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCE 335 (343)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred --CCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHh
Confidence 445679999999999999999999999999887654
No 78
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=4.2e-39 Score=383.01 Aligned_cols=258 Identities=24% Similarity=0.322 Sum_probs=204.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
....+|++.++||+|+||.||+|.+. +..||+|+....... ...... .+.+|+.+++.++||||+++++++.+
T Consensus 145 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~----~~~~e~~~l~~l~h~~iv~l~~~~~~ 219 (446)
T 4ejn_A 145 VTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIV-AKDEVA----HTLTENRVLQNSRHPFLTALKYSFQT 219 (446)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC------------------CCCCCSCTTSCCEEEEEEE
T ss_pred CChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhh-hhHHHH----HHHHHHHHHHhCCCCeEeeEEEEEee
Confidence 35678999999999999999999984 567888876533211 111222 23789999999999999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCe
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENI 959 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NI 959 (1141)
.+ ..++||||+++++|.+++.. ...+++..+..|+.||+.||+|||+ +||+||||||+||
T Consensus 220 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NI 280 (446)
T 4ejn_A 220 HD--------------RLCFVMEYANGGELFFHLSR-----ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENL 280 (446)
T ss_dssp TT--------------EEEEEECCCSSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGE
T ss_pred CC--------------EEEEEEeeCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHE
Confidence 55 34999999999999999976 2469999999999999999999998 9999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||+|+....... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 281 ll~~~-------~~~kl~DFG~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il 339 (446)
T 4ejn_A 281 MLDKD-------GHIKITDFGLCKEGIKDGA----------TMKTFCGTPEYLAPEVLED----NDYGRAVDWWGLGVVM 339 (446)
T ss_dssp EECSS-------SCEEECCCCCCCTTCC---------------CCSSSCGGGCCHHHHHT----SCCCTHHHHHHHHHHH
T ss_pred EECCC-------CCEEEccCCCceeccCCCc----------ccccccCCccccCHhhcCC----CCCCCccchhhhHHHH
Confidence 99987 7899999999975332111 1224579999999999976 5689999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|||++|+.||.+.+..++...+...... ++ ...++++.+||.+||+.||.+|
T Consensus 340 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~~~~~~~li~~~L~~dP~~R 391 (446)
T 4ejn_A 340 YEMMCGRLPFYNQDHEKLFELILMEEIR-FP---------------------------RTLGPEAKSLLSGLLKKDPKQR 391 (446)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHTCSSTTTS
T ss_pred HHHhhCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------ccCCHHHHHHHHHHcccCHHHh
Confidence 9999999999988877777766543321 11 1345679999999999999999
Q ss_pred C-----CHHHHHHHHHhhc
Q 001143 1120 P-----TAGDLYEMFVART 1133 (1141)
Q Consensus 1120 P-----Sa~ElL~~L~~~~ 1133 (1141)
| +++|+++|+||..
T Consensus 392 ~~~~~~t~~ell~hp~f~~ 410 (446)
T 4ejn_A 392 LGGGSEDAKEIMQHRFFAG 410 (446)
T ss_dssp TTCSTTTHHHHHTSGGGTT
T ss_pred CCCCCCCHHHHHhCccccC
Confidence 9 9999999999974
No 79
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=9.7e-39 Score=364.97 Aligned_cols=275 Identities=23% Similarity=0.242 Sum_probs=207.5
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCC-CChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCG-SSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~-~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.+|++.+.||+|+||.||+|.+. +..+|+|+....... ......+ .+.+|+.++++++||||+++++++.+..
T Consensus 26 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 26 KKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVE----RIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHH----HHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHH----HHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 35999999999999999999985 456788876433111 1112222 3489999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-----------------------------------cCCCCCCH
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------------------------------TGEKHVSV 927 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-----------------------------------~~~~~Ls~ 927 (1141)
..++||||++|++|.+++..... .....+++
T Consensus 102 --------------~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (345)
T 3hko_A 102 --------------YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQRE 167 (345)
T ss_dssp --------------EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHH
T ss_pred --------------eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccH
Confidence 35999999999999998852111 01223577
Q ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccC
Q 001143 928 KLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVG 1007 (1141)
Q Consensus 928 ~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~G 1007 (1141)
..++.|+.||+.||+|||++||+||||||+|||++.++. +.+||+|||++..+...... .........|
T Consensus 168 ~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~-----~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~~g 236 (345)
T 3hko_A 168 KLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKS-----FEIKLVDFGLSKEFYKLNNG------EYYGMTTKAG 236 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSS-----CCEEECCCTTCEEGGGTTCC--------------CC
T ss_pred HHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCC-----ceEEEeeccccccccccCcc------ccccccccCC
Confidence 889999999999999999999999999999999986521 48999999999765432211 0011224569
Q ss_pred CCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcccccccc
Q 001143 1008 TPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQS 1087 (1141)
Q Consensus 1008 T~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~ 1087 (1141)
|+.|+|||++.+. ...++.++|||||||++|+|++|+.||.+....+....+..........
T Consensus 237 t~~y~aPE~~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---------------- 298 (345)
T 3hko_A 237 TPYFVAPEVLNTT--NESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENP---------------- 298 (345)
T ss_dssp CGGGCCHHHHTCS--SSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSG----------------
T ss_pred CccccCchhhccC--CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCc----------------
Confidence 9999999998652 2467899999999999999999999999888777666664433221110
Q ss_pred CCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcCC
Q 001143 1088 GSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1088 ~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~s 1135 (1141)
.....++.+.+||.+||+.||.+|||+.|+++|+|+...+
T Consensus 299 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~ 338 (345)
T 3hko_A 299 --------NYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS 338 (345)
T ss_dssp --------GGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred --------ccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence 0014567799999999999999999999999999998654
No 80
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.2e-38 Score=383.23 Aligned_cols=262 Identities=27% Similarity=0.331 Sum_probs=211.6
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||+||+|++. +..+|+|+........ .... .+.+|+.++++++||||+++++++.+..
T Consensus 22 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~--~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~- 94 (486)
T 3mwu_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKN--KDTS----TILREVELLKKLDHPNIMKLFEILEDSS- 94 (486)
T ss_dssp HHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBC--SCHH----HHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred cceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccc--hHHH----HHHHHHHHHHhCCCCCcCeEEEEEEcCC-
Confidence 45999999999999999999985 6678888864322111 1122 3479999999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++.
T Consensus 95 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~ 156 (486)
T 3mwu_A 95 -------------SFYIVGELYTGGELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156 (486)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESS
T ss_pred -------------EEEEEEEcCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEec
Confidence 34999999999999999876 246999999999999999999999999999999999999965
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
.. ..+.+||+|||+++...... ......||+.|+|||++.+ .++.++|||||||++|+|+
T Consensus 157 ~~----~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~ll 216 (486)
T 3mwu_A 157 KE----KDCDIKIIDFGLSTCFQQNT-----------KMKDRIGTAYYIAPEVLRG-----TYDEKCDVWSAGVILYILL 216 (486)
T ss_dssp SS----TTCCEEECSCSCTTTBCCC---------------CCTTGGGGCCGGGGGS-----CCCHHHHHHHHHHHHHHHH
T ss_pred CC----CCCCEEEEECCcCeECCCCC-----------ccCCCcCCCCCCCHHHhCC-----CCCchhhHHHHHHHHHHHH
Confidence 31 12679999999997654321 1123469999999999875 4889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||.+.+..++...+..+........+ ...++.+.+||.+||+.||.+|||+.
T Consensus 217 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~R~t~~ 272 (486)
T 3mwu_A 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQW------------------------RTISDDAKDLIRKMLTFHPSLRITAT 272 (486)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCSCSGGG------------------------GGSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCCCccc------------------------CCCCHHHHHHHHHHcCCChhhCcCHH
Confidence 999999998888888777655433211100 14567799999999999999999999
Q ss_pred HHHHHHHhhcCCC
Q 001143 1124 DLYEMFVARTSSS 1136 (1141)
Q Consensus 1124 ElL~~L~~~~~s~ 1136 (1141)
|+++|+|++....
T Consensus 273 ~~l~hp~~~~~~~ 285 (486)
T 3mwu_A 273 QCLEHPWIQKYSS 285 (486)
T ss_dssp HHHHCHHHHHTCC
T ss_pred HHhcCHhhccCcc
Confidence 9999999986543
No 81
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=8.1e-39 Score=354.33 Aligned_cols=265 Identities=26% Similarity=0.357 Sum_probs=211.6
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
...++|++.+.||+|+||.||+|.+. +..+++|+.... .......+. +.+|+.++++++||||+++++++.+
T Consensus 3 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~ 76 (279)
T 2w5a_A 3 SRAEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYG--SMTEAEKQM----LVSEVNLLRELKHPNIVRYYDRIID 76 (279)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECT--TCCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred CchhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcc--cCCHHHHHH----HHHHHHHHHhcCCCCCCeEEEEEec
Confidence 34678999999999999999999985 566777775433 223333333 4899999999999999999998764
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCC
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH-----IMHRDIK 955 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g-----IvHrDLK 955 (1141)
.. ....++||||+++++|.+++...... ...+++..++.++.||+.||.|||++| |+|||||
T Consensus 77 ~~------------~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~ 143 (279)
T 2w5a_A 77 RT------------NTTLYIVMEYCEGGDLASVITKGTKE-RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143 (279)
T ss_dssp GG------------GTEEEEEEECCTTEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCS
T ss_pred CC------------CceEEEEEeCCCCCCHHHHHHhhccc-CCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccc
Confidence 22 12469999999999999999864332 346999999999999999999999999 9999999
Q ss_pred CCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1035 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1035 (1141)
|+||+++.+ +.+||+|||.+......... .....||+.|+|||++.+ ..++.++|||||
T Consensus 144 p~NIl~~~~-------~~~kl~dfg~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~sl 202 (279)
T 2w5a_A 144 PANVFLDGK-------QNVKLGDFGLARILNHDTSF----------AKTFVGTPYYMSPEQMNR----MSYNEKSDIWSL 202 (279)
T ss_dssp GGGEEECSS-------SCEEECCCCHHHHC---CHH----------HHHHHSCCTTCCHHHHHC----C-CCHHHHHHHH
T ss_pred hhhEEEcCC-------CCEEEecCchheeecccccc----------ccccCCCccccChHHhcc----CCCCchhhHHHH
Confidence 999999887 78999999998765432111 012358999999999976 567899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1036 GCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|+++|+|++|+.||......++...+..+..+.++. ..+..+.+++.+||+.|
T Consensus 203 G~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~ 255 (279)
T 2w5a_A 203 GCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPY---------------------------RYSDELNEIITRMLNLK 255 (279)
T ss_dssp HHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSS
T ss_pred HHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCCc---------------------------ccCHHHHHHHHHHcCCC
Confidence 999999999999999887777777776655433221 34567999999999999
Q ss_pred CCCCCCHHHHHHHHHhhcC
Q 001143 1116 PTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~~~ 1134 (1141)
|.+|||+.|+++++|+...
T Consensus 256 p~~Rps~~~ll~~~~~~~~ 274 (279)
T 2w5a_A 256 DYHRPSVEEILENPLILEH 274 (279)
T ss_dssp GGGSCCHHHHHTSTTCCGG
T ss_pred cccCCCHHHHHhChhhhhh
Confidence 9999999999999998754
No 82
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=2.1e-38 Score=363.97 Aligned_cols=300 Identities=16% Similarity=0.201 Sum_probs=211.2
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+.+|++.++||+|+||.||+|++. +..+|+|+..... ....... .+.+|+.++++++||||+++++++..
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~ 87 (351)
T 3mi9_A 14 DEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMEN--EKEGFPI----TALREIKILQLLKHENVVNLIEICRT 87 (351)
T ss_dssp CBGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSS--CSSSSCH----HHHHHHHHHHHCCCTTBCCEEEEEEE
T ss_pred ccccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEeccc--ccccchH----HHHHHHHHHHhccCCCcccHhheeec
Confidence 34678999999999999999999984 5667777643332 1211112 23689999999999999999999886
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.... ........++||||++ ++|.+.+.. ....+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus 88 ~~~~------~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl 156 (351)
T 3mi9_A 88 KASP------YNRCKGSIYLVFDFCE-HDLAGLLSN----VLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVL 156 (351)
T ss_dssp C--------------CEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred cccc------cccCCceEEEEEeccC-CCHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEE
Confidence 4321 0111235799999998 588887764 2346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||+++.+...... .........||+.|+|||++.+ ...++.++|||||||++|
T Consensus 157 ~~~~-------~~~kl~Dfg~a~~~~~~~~~------~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~ 220 (351)
T 3mi9_A 157 ITRD-------GVLKLADFGLARAFSLAKNS------QPNRYTNRVVTLWYRPPELLLG---ERDYGPPIDLWGAGCIMA 220 (351)
T ss_dssp ECTT-------SCEEECCCTTCEECCCCSSS------SCCCCCSSCSCGGGCCHHHHTT---CCSCCTHHHHHHHHHHHH
T ss_pred EcCC-------CCEEEccchhcccccccccc------cccccCCcccccCccCchhhcC---CCCCCcHhHHHHHHHHHH
Confidence 9887 78999999999765432211 1112234568999999999875 245789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCc-cccccccCCCCCCch---hhhhhHHHHHHHHHHhcccCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH-EHEVAQSGSGFEKPE---AELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+|++|+.||.+....+....+........+..+....... ............... .....++.+.+||.+||+.||
T Consensus 221 ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 300 (351)
T 3mi9_A 221 EMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDP 300 (351)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSG
T ss_pred HHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCCh
Confidence 9999999999887776665553221111111111000000 000000000000000 011235678999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001143 1117 TERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~s 1135 (1141)
++|||++|+++|+|+....
T Consensus 301 ~~R~t~~e~l~hp~f~~~~ 319 (351)
T 3mi9_A 301 AQRIDSDDALNHDFFWSDP 319 (351)
T ss_dssp GGSCCHHHHHTSGGGGSSS
T ss_pred hhCCCHHHHhCCCCcCCCC
Confidence 9999999999999997643
No 83
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.5e-38 Score=370.04 Aligned_cols=255 Identities=20% Similarity=0.304 Sum_probs=200.5
Q ss_pred eEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~ 886 (1141)
...+.||+|+||.||+|.+. +..+|+|+.... .....+. +.+|+.++++++||||+++++++.+..
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~----~~~~~~~----~~~E~~~l~~l~hpnIv~~~~~~~~~~---- 159 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTR----GMKDKEE----VKNEISVMNQLDHANLIQLYDAFESKN---- 159 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECC----SHHHHHH----HHHHHHHHTTCCCTTBCCEEEEEECSS----
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEccc----ccccHHH----HHHHHHHHHhCCCCCCCeEEEEEEECC----
Confidence 44778999999999999984 567888876532 2233333 489999999999999999999998654
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccc
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERK 966 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~ 966 (1141)
..++||||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||+..+..
T Consensus 160 ----------~~~lv~E~~~~~~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~ 225 (373)
T 2x4f_A 160 ----------DIVLVMEYVDGGELFDRIID----ESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDA 225 (373)
T ss_dssp ----------EEEEEEECCTTCEEHHHHHH----TGGGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTT
T ss_pred ----------EEEEEEeCCCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCC
Confidence 35999999999999998875 1246999999999999999999999999999999999999954311
Q ss_pred cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCC
Q 001143 967 KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQ 1046 (1141)
Q Consensus 967 ~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk 1046 (1141)
+.+||+|||+++.+..... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+
T Consensus 226 -----~~~kl~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~elltg~ 285 (373)
T 2x4f_A 226 -----KQIKIIDFGLARRYKPREK-----------LKVNFGTPEFLAPEVVNY----DFVSFPTDMWSVGVIAYMLLSGL 285 (373)
T ss_dssp -----TEEEECCCSSCEECCTTCB-----------CCCCCSSCTTCCHHHHTT----CBCCHHHHHHHHHHHHHHHHHSS
T ss_pred -----CcEEEEeCCCceecCCccc-----------cccccCCCcEeChhhccC----CCCCcHHhHHHHHHHHHHHHhCC
Confidence 7899999999976543211 123469999999999875 56789999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 001143 1047 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY 1126 (1141)
Q Consensus 1047 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL 1126 (1141)
.||.+.+..+....+.......... .....++++.+||.+||+.||.+|||+.|++
T Consensus 286 ~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l 341 (373)
T 2x4f_A 286 SPFLGDNDAETLNNILACRWDLEDE------------------------EFQDISEEAKEFISKLLIKEKSWRISASEAL 341 (373)
T ss_dssp CTTCCSSHHHHHHHHHHTCCCSCSG------------------------GGTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred CCCCCCCHHHHHHHHHhccCCCChh------------------------hhccCCHHHHHHHHHHcCCChhhCCCHHHHh
Confidence 9999888777776665443221110 0114567799999999999999999999999
Q ss_pred HHHHhhc
Q 001143 1127 EMFVART 1133 (1141)
Q Consensus 1127 ~~L~~~~ 1133 (1141)
+|+|+..
T Consensus 342 ~hp~~~~ 348 (373)
T 2x4f_A 342 KHPWLSD 348 (373)
T ss_dssp HSHHHHC
T ss_pred cCcCcCC
Confidence 9999864
No 84
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.9e-38 Score=348.67 Aligned_cols=261 Identities=23% Similarity=0.363 Sum_probs=209.4
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+++|++.+.||+|+||.||+|++.+..+|+|++... .......+.+ .+|+.++++++||||+++++++.+.
T Consensus 6 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~ 79 (271)
T 3kmu_A 6 GIDFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVR--DWSTRKSRDF----NEECPRLRIFSHPNVLPVLGACQSP 79 (271)
T ss_dssp CCCGGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCT--TCCHHHHHHH----HHHGGGGCCCSCTTEECEEEEECTT
T ss_pred CCCHHHhHHHHHhcCCCcceEEEEEECCeeEEEEEeccc--ccCHHHHHHH----HHHHHHHHhcCCCchhheEEEEccC
Confidence 345778999999999999999999999999999987643 2233333344 8999999999999999999998764
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCCe
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENI 959 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g--IvHrDLKP~NI 959 (1141)
.. ...++||||+++++|.+++.. .....+++..++.|+.||+.||.|||++| |+||||||+||
T Consensus 80 ~~------------~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Ni 144 (271)
T 3kmu_A 80 PA------------PHPTLITHWMPYGSLYNVLHE---GTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSV 144 (271)
T ss_dssp TS------------SSCEEEEECCTTCBHHHHHHS---CSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGE
T ss_pred CC------------CCeEeeecccCCCcHHHHHhh---cccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceE
Confidence 21 134999999999999999975 23336999999999999999999999999 99999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.++|+|||++..... ....||+.|+|||++.+.. ...++.++|||||||++
T Consensus 145 l~~~~-------~~~~l~~~~~~~~~~~---------------~~~~~t~~y~aPE~~~~~~-~~~~~~~~Di~slG~il 201 (271)
T 3kmu_A 145 MIDED-------MTARISMADVKFSFQS---------------PGRMYAPAWVAPEALQKKP-EDTNRRSADMWSFAVLL 201 (271)
T ss_dssp EECTT-------SCEEEEGGGSCCTTSC---------------TTCBSCGGGSCHHHHHSCG-GGSCHHHHHHHHHHHHH
T ss_pred EEcCC-------cceeEEeccceeeecc---------------cCccCCccccChhhhccCC-CCCCCchhhHHHHHHHH
Confidence 99887 7899998888653221 1235899999999987622 12334589999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+|++|+.||.+....+....+.. ...+..+ ...++.+.+++.+||+.||.+
T Consensus 202 ~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p~~ 254 (271)
T 3kmu_A 202 WELVTREVPFADLSNMEIGMKVALEGLRPTIP---------------------------PGISPHVSKLMKICMNEDPAK 254 (271)
T ss_dssp HHHHHCSCTTTTSCHHHHHHHHHHSCCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHhCCCCccccChHHHHHHHHhcCCCCCCC---------------------------CCCCHHHHHHHHHHcCCChhh
Confidence 999999999998777766555432 2222211 145667999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001143 1119 RPTAGDLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~ 1133 (1141)
|||+.++++.+....
T Consensus 255 Rps~~~il~~L~~l~ 269 (271)
T 3kmu_A 255 RPKFDMIVPILEKMQ 269 (271)
T ss_dssp SCCHHHHHHHHHHHC
T ss_pred CcCHHHHHHHHHHhh
Confidence 999999999887643
No 85
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=2e-38 Score=367.17 Aligned_cols=258 Identities=24% Similarity=0.280 Sum_probs=193.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
...++|++.++||+|+||+||+|++. +..||+|+.... ... .+. +.+|+.++++++||||+++++++.+
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~---~~~----~~~E~~~l~~l~hpniv~~~~~~~~ 87 (361)
T 3uc3_A 17 HDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERG--AAI---DEN----VQREIINHRSLRHPNIVRFKEVILT 87 (361)
T ss_dssp CCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESS--TTS---CHH----HHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecC--ccc---cHH----HHHHHHHHHhCCCCCCCcEEEEEee
Confidence 34678999999999999999999984 566888875422 111 122 3789999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..++||||+++++|.+++.. ...+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus 88 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nil 148 (361)
T 3uc3_A 88 PT--------------HLAIIMEYASGGELYERICN-----AGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTL 148 (361)
T ss_dssp SS--------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEE
T ss_pred CC--------------EEEEEEEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEE
Confidence 55 35999999999999999976 236999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCC-chhhHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYG-LEVDIWSYGCLL 1039 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s-~ksDVWSLGviL 1039 (1141)
++.+.. +.+||+|||+++...... ......||+.|+|||++.+ ..++ .++|||||||++
T Consensus 149 l~~~~~-----~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~~DiwslG~il 208 (361)
T 3uc3_A 149 LDGSPA-----PRLKICDFGYSKSSVLHS-----------QPKSTVGTPAYIAPEVLLR----QEYDGKIADVWSCGVTL 208 (361)
T ss_dssp ECSSSS-----CCEEECCCCCC--------------------------CTTSCHHHHHC----SSCCHHHHHHHHHHHHH
T ss_pred EcCCCC-----ceEEEeecCccccccccC-----------CCCCCcCCCCcCChhhhcC----CCCCCCeeeeehhHHHH
Confidence 986621 459999999986432211 1123469999999999976 3343 459999999999
Q ss_pred HHHHhCCCCCCCCCH----HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1040 LELLTLQVPYMGLSE----LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~----~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|+|++|+.||.+... ......+...... ++. ....++.+.+||.+||+.|
T Consensus 209 ~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~-~~~-------------------------~~~~s~~~~~li~~~L~~d 262 (361)
T 3uc3_A 209 YVMLVGAYPFEDPEEPRDYRKTIQRILSVKYS-IPD-------------------------DIRISPECCHLISRIFVAD 262 (361)
T ss_dssp HHHHHSSCSCC----CCCHHHHHHHHHTTCCC-CCT-------------------------TSCCCHHHHHHHHHHSCSC
T ss_pred HHHHhCCCCCCCCccHHHHHHHHHHHhcCCCC-CCC-------------------------cCCCCHHHHHHHHHHccCC
Confidence 999999999976432 2222322221110 000 0134567999999999999
Q ss_pred CCCCCCHHHHHHHHHhhcC
Q 001143 1116 PTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~~~ 1134 (1141)
|.+|||+.|+++|+|+...
T Consensus 263 P~~Rps~~ell~hp~f~~~ 281 (361)
T 3uc3_A 263 PATRISIPEIKTHSWFLKN 281 (361)
T ss_dssp TTTSCCHHHHHTSHHHHTT
T ss_pred hhHCcCHHHHHhCcchhcC
Confidence 9999999999999999643
No 86
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=1.3e-38 Score=359.80 Aligned_cols=267 Identities=23% Similarity=0.270 Sum_probs=204.1
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||+|+||.||+|++ .+..+|+|+...... ...... .++.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~----~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 85 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLA-RDPSFY----LRFRREAQNAAALNHPAIVAVYDTGEAET 85 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTT-TSHHHH----HHHHHHHTTCCCCCCTTBCCEEEEEEEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCcccc-CCHHHH----HHHHHHHHHHHcCCCCCcceEEEeeeccC
Confidence 46799999999999999999997 456778887643321 122222 34489999999999999999999987643
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ....|+||||++|++|.++++. ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 86 ~~----------~~~~~lv~e~~~g~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~ 150 (311)
T 3ork_A 86 PA----------GPLPYIVMEYVDGVTLRDIVHT-----EGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150 (311)
T ss_dssp TT----------EEEEEEEEECCCEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred CC----------CcccEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc
Confidence 21 2245999999999999999976 23699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++..+...... ........||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 151 ~~-------~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~~l~~l 212 (311)
T 3ork_A 151 AT-------NAVKVMDFGIARAIADSGNS-------VTQTAAVIGTAQYLSPEQARG----DSVDARSDVYSLGCVLYEV 212 (311)
T ss_dssp TT-------SCEEECCCSCC-------------------------CCTTCCHHHHHT----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeccCcccccccccc-------cccccccCcCcccCCHHHhcC----CCCCchHhHHHHHHHHHHH
Confidence 87 78999999999765432211 011223468999999999986 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||.+....+....+.......... .....+.++.+++.+||+.||.+||++
T Consensus 213 l~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~dP~~R~~~ 268 (311)
T 3ork_A 213 LTGEPPFTGDSPVSVAYQHVREDPIPPSA------------------------RHEGLSADLDAVVLKALAKNPENRYQT 268 (311)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHCCCCCHHH------------------------HSTTCCHHHHHHHHHHTCSSGGGSCSS
T ss_pred HhCCCCCCCCChHHHHHHHhcCCCCCccc------------------------ccCCCCHHHHHHHHHHHhcCHhhChhh
Confidence 99999999887776655544333221110 011456779999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
.+++.+.|++.
T Consensus 269 ~~~l~~~l~~~ 279 (311)
T 3ork_A 269 AAEMRADLVRV 279 (311)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988864
No 87
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.4e-38 Score=383.42 Aligned_cols=259 Identities=24% Similarity=0.339 Sum_probs=206.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..|++.++||+|+||+||+|++. +..+|+|+...... ...... .+.+|+.+++.++|||||++++++.+..
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~- 109 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSV--STSSNS----KLLEEVAVLKLLDHPNIMKLYDFFEDKR- 109 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-------CTTH----HHHHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEecccc--CchHHH----HHHHHHHHHHhCCCCCCCeEEEEEEeCC-
Confidence 35999999999999999999985 55678887643321 111122 3479999999999999999999998655
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++|+|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++.
T Consensus 110 -------------~~~lv~e~~~~g~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 171 (494)
T 3lij_A 110 -------------NYYLVMECYKGGELFDEIIH-----RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLES 171 (494)
T ss_dssp -------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred -------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeC
Confidence 34999999999999998876 246999999999999999999999999999999999999976
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
.. ..+.+||+|||++........ .....||+.|+|||++.+ .++.++||||+||++|+|+
T Consensus 172 ~~----~~~~~kl~DfG~a~~~~~~~~-----------~~~~~gt~~y~aPE~l~~-----~~~~~~DiwslG~il~~ll 231 (494)
T 3lij_A 172 KE----KDALIKIVDFGLSAVFENQKK-----------MKERLGTAYYIAPEVLRK-----KYDEKCDVWSIGVILFILL 231 (494)
T ss_dssp SS----TTCCEEECCCTTCEECBTTBC-----------BCCCCSCTTTCCHHHHTT-----CBCTHHHHHHHHHHHHHHH
T ss_pred CC----CCCcEEEEECCCCeECCCCcc-----------ccccCCCcCeeCHHHHcc-----cCCCchhHHHHHHHHHHHH
Confidence 41 125699999999976543211 123469999999999864 5789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||.+....++...+..+........+ ...++.+.+||.+||+.||.+|||+.
T Consensus 232 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~R~s~~ 287 (494)
T 3lij_A 232 AGYPPFGGQTDQEILRKVEKGKYTFDSPEW------------------------KNVSEGAKDLIKQMLQFDSQRRISAQ 287 (494)
T ss_dssp HSSCSSCCSSHHHHHHHHHHTCCCCCSGGG------------------------TTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCCchhc------------------------ccCCHHHHHHHHHHCCCChhhCccHH
Confidence 999999998888888877665443211110 14566799999999999999999999
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
|+++|+|++.
T Consensus 288 e~l~hp~~~~ 297 (494)
T 3lij_A 288 QALEHPWIKE 297 (494)
T ss_dssp HHHTCHHHHH
T ss_pred HHhcCccccc
Confidence 9999999964
No 88
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.9e-39 Score=364.72 Aligned_cols=284 Identities=19% Similarity=0.214 Sum_probs=204.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+++|++.++||+|+||+||+|++. +..+|+|+...... ...... +.+|+.++++++||||+++++++....
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~ 73 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE---EGAPCT----AIREVSLLKDLKHANIVTLHDIIHTEK 73 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC---------CCC----CCCCHHHHSCCCCTTBCCEEEEEECSS
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccc---cccchh----HHHHHHHHHhcCCCCCCeeeeEEeeCC
Confidence 468999999999999999999985 56688887543221 111112 257999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .++||||++ ++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 74 ~--------------~~lv~e~~~-~~l~~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~ 134 (324)
T 3mtl_A 74 S--------------LTLVFEYLD-KDLKQYLDDC----GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN 134 (324)
T ss_dssp C--------------EEEEEECCS-EEHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC
T ss_pred E--------------EEEEecccc-cCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC
Confidence 3 499999997 6999998762 34699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++........ ......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 135 ~~-------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~~l 194 (324)
T 3mtl_A 135 ER-------GELKLADFGLARAKSIPTK----------TYDNEVVTLWYRPPDILLG---STDYSTQIDMWGVGCIFYEM 194 (324)
T ss_dssp TT-------CCEEECSSSEEECC----------------------CGGGCCHHHHTT---CCCCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccCcccccccCCcc----------ccccccCcccccChhhhcC---CCCCCcHHHHHHHHHHHHHH
Confidence 87 7899999999975433211 1123468999999999875 24578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcc-ccccccCC-CCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE-HEVAQSGS-GFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
++|+.||.+.+..+....+...........+........ ........ ...........+.++.+||.+||+.||.+||
T Consensus 195 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 274 (324)
T 3mtl_A 195 ATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI 274 (324)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCC
Confidence 999999998887776665533211111111110000000 00000000 0000111124567899999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
|++|+++|+||...
T Consensus 275 t~~e~l~hp~f~~~ 288 (324)
T 3mtl_A 275 SAEDAMKHPFFLSL 288 (324)
T ss_dssp CHHHHTTSGGGGGG
T ss_pred CHHHHhcChhhhhc
Confidence 99999999999754
No 89
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=2.5e-38 Score=377.29 Aligned_cols=298 Identities=18% Similarity=0.196 Sum_probs=194.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.++||+|+||+||+|.+. +..||+|+. ..........+. +.+|+.+|++++|||||++++++....
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i--~~~~~~~~~~~~----~~~E~~~l~~l~h~niv~l~~~~~~~~ 125 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKI--LRVFEDLIDCKR----ILREIAILNRLNHDHVVKVLDIVIPKD 125 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEE--CSTTSSHHHHHH----HHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEe--chhhcCHHHHHH----HHHHHHHHHhCCCCCCCceEEEEecCC
Confidence 367999999999999999999885 556777764 332333333334 489999999999999999999986533
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. ......|+||||+. ++|.++++. ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 126 ~---------~~~~~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~ 190 (458)
T 3rp9_A 126 V---------EKFDELYVVLEIAD-SDFKKLFRT-----PVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN 190 (458)
T ss_dssp T---------TTCCCEEEEECCCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC
T ss_pred c---------ccCceEEEEEeccc-cchhhhccc-----CCCCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEEC
Confidence 1 12235799999985 899999875 34699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccc-----------------cCCCCCCCCccCCCcccchhhhccccCCCC
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA-----------------HRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1025 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~-----------------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1025 (1141)
.+ +.+||+|||+|+............ ..........+||+.|+|||++.. ...
T Consensus 191 ~~-------~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~---~~~ 260 (458)
T 3rp9_A 191 QD-------CSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL---QEN 260 (458)
T ss_dssp TT-------CCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTT---CCC
T ss_pred CC-------CCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhC---CCC
Confidence 87 889999999998764322110000 000011234578999999998754 256
Q ss_pred CCchhhHHHHHHHHHHHHh-----------CCCCCCCCCH--------------------HHHHHHH-HhCCCCCchhHH
Q 001143 1026 YGLEVDIWSYGCLLLELLT-----------LQVPYMGLSE--------------------LEIHDLI-QMGKRPRLTDEL 1073 (1141)
Q Consensus 1026 ~s~ksDVWSLGviL~ELLT-----------Gk~Pf~~~~~--------------------~el~~~I-~~~~~p~l~~~l 1073 (1141)
++.++|||||||++|||++ |+++|.+.+. .+....+ .....+.. ..+
T Consensus 261 ~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~-~~~ 339 (458)
T 3rp9_A 261 YTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSE-EDI 339 (458)
T ss_dssp CCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCH-HHH
T ss_pred CCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCH-HHH
Confidence 8999999999999999999 6777765431 1122222 11111111 111
Q ss_pred hhhccCcccccc---ccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1074 EALGSCHEHEVA---QSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1074 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
............ ...............+.++.+||.+||.+||.+|||++|+++|+|+..-
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~ 403 (458)
T 3rp9_A 340 EALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEV 403 (458)
T ss_dssp HTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTT
T ss_pred hhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhc
Confidence 110000000000 0000011111112457789999999999999999999999999999753
No 90
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-38 Score=365.72 Aligned_cols=287 Identities=22% Similarity=0.244 Sum_probs=205.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||.||+|++. +..+|+|+....... .........+.+|+.++++++||||+++++++.+..
T Consensus 9 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (346)
T 1ua2_A 9 AKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRS---EAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS 85 (346)
T ss_dssp ----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC---------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred hcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcc---hhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC
Confidence 567999999999999999999985 567888875432211 111122234579999999999999999999997655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ++||||++ ++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 86 ~~--------------~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 146 (346)
T 1ua2_A 86 NI--------------SLVFDFME-TDLEVIIKD----NSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD 146 (346)
T ss_dssp CC--------------EEEEECCS-EEHHHHHTT----CCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred ce--------------EEEEEcCC-CCHHHHHHh----cCcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc
Confidence 43 99999998 589888864 234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++....... ......||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 147 ~~-------~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el 206 (346)
T 1ua2_A 147 EN-------GVLKLADFGLAKSFGSPNR----------AYTHQVVTRWYRAPELLFG---ARMYGVGVDMWAVGCILAEL 206 (346)
T ss_dssp TT-------CCEEECCCGGGSTTTSCCC----------CCCCSCCCCTTCCHHHHTT---CSCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEecccceeccCCcc----------cCCcccccccccCchHhhC---CCCCCchhhhHhHHHHHHHH
Confidence 87 7899999999976543211 1223468999999999875 23578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++|.+||.+....+....+... ..+... .+...........................+.++.+||.+||+.||.+|||
T Consensus 207 l~g~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 285 (346)
T 1ua2_A 207 LLRVPFLPGDSDLDQLTRIFETLGTPTEE-QWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARIT 285 (346)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHHHCCCCTT-TSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCC
T ss_pred HHCCCCCCCCCHHHHHHHHHHHcCCCChh-hhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCC
Confidence 9999999988777766555322 211111 11000000000000000000001111245678999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
+.|+++|+|+...
T Consensus 286 ~~ell~h~~f~~~ 298 (346)
T 1ua2_A 286 ATQALKMKYFSNR 298 (346)
T ss_dssp HHHHHTSGGGTSS
T ss_pred HHHHhcChhhhcC
Confidence 9999999999754
No 91
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.1e-38 Score=363.96 Aligned_cols=261 Identities=24% Similarity=0.279 Sum_probs=187.9
Q ss_pred CceEe---eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEec
Q 001143 807 SLSSC---DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKIS 880 (1141)
Q Consensus 807 ~y~i~---~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~ 880 (1141)
+|++. +.||+|+||+||+|.+. +..+|+|+.... ... .+.+|+.+++.+. ||||+++++++.+
T Consensus 9 ~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-------~~~----~~~~e~~~l~~l~~h~niv~~~~~~~~ 77 (325)
T 3kn6_A 9 HYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-------MEA----NTQKEITALKLCEGHPNIVKLHEVFHD 77 (325)
T ss_dssp HEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-------GHH----HHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred ccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-------hhh----hHHHHHHHHHHhcCCCCeeEEEEEEEc
Confidence 45554 78999999999999985 566888875321 112 2368999999997 9999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..++||||+++++|.+++.. ...+++.++..|+.||+.||.|||++||+||||||+|||
T Consensus 78 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl 138 (325)
T 3kn6_A 78 QL--------------HTFLVMELLNGGELFERIKK-----KKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLL 138 (325)
T ss_dssp SS--------------EEEEEECCCCSCBHHHHHHH-----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred CC--------------EEEEEEEccCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEE
Confidence 55 34999999999999999986 346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.++ ....+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 139 l~~~~----~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwslG~il~ 200 (325)
T 3kn6_A 139 FTDEN----DNLEIKIIDFGFARLKPPDNQ----------PLKTPCFTLHYAAPELLNQ----NGYDESCDLWSLGVILY 200 (325)
T ss_dssp EEC--------CEEEECCCTTCEECCC------------------------------------CCCCHHHHHHHHHHHHH
T ss_pred EecCC----CcccEEEeccccceecCCCCC----------cccccCCCcCccCHHHhcC----CCCCCccchHHHHHHHH
Confidence 97652 114799999999975433211 1123468999999999876 56889999999999999
Q ss_pred HHHhCCCCCCCCCH-------HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001143 1041 ELLTLQVPYMGLSE-------LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~-------~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~ 1113 (1141)
+|++|+.||.+... .++...+..+....... .....++++.+||.+||+
T Consensus 201 ~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~s~~~~~li~~~L~ 256 (325)
T 3kn6_A 201 TMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGE------------------------AWKNVSQEAKDLIQGLLT 256 (325)
T ss_dssp HHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSH------------------------HHHTSCHHHHHHHHHHHC
T ss_pred HHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcc------------------------cccCCCHHHHHHHHHHCC
Confidence 99999999975332 33444444333221111 112456789999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcCCCCCC
Q 001143 1114 ENPTERPTAGDLYEMFVARTSSSISS 1139 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~~~s~~ss 1139 (1141)
.||.+|||+.|+++|+|+......++
T Consensus 257 ~dP~~Rpt~~ell~h~w~~~~~~~~~ 282 (325)
T 3kn6_A 257 VDPNKRLKMSGLRYNEWLQDGSQLSS 282 (325)
T ss_dssp CCTTTCCCTTTSTTCGGGCTTCCCCC
T ss_pred CChhHCCCHHHHhcChhhccCccCCC
Confidence 99999999999999999987655443
No 92
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-38 Score=381.78 Aligned_cols=260 Identities=23% Similarity=0.274 Sum_probs=212.1
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+.+|.+.+.||+|+||.||+|++. +..||+|+..... .........+.+|+.+++.++||||+++++++.
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~-----~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~ 86 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK-----IRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIS 86 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHH-----HHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhh-----ccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEE
Confidence 345678999999999999999999984 6778888864321 111122234589999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
... ..++||||++|++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus 87 ~~~--------------~~~lv~E~~~gg~L~~~l~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NI 147 (476)
T 2y94_A 87 TPS--------------DIFMVMEYVSGGELFDYICK-----NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENV 147 (476)
T ss_dssp CSS--------------EEEEEEECCSSEEHHHHTTS-----SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGE
T ss_pred ECC--------------EEEEEEeCCCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHE
Confidence 654 35999999999999999864 34699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||++....... ......||+.|+|||++.+. ...+.++|||||||++
T Consensus 148 ll~~~-------~~vkL~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~---~~~~~~~DiwSlGvil 206 (476)
T 2y94_A 148 LLDAH-------MNAKIADFGLSNMMSDGE-----------FLRTSCGSPNYAAPEVISGR---LYAGPEVDIWSSGVIL 206 (476)
T ss_dssp EECTT-------CCEEECCCSSCEECCTTC-----------CBCCCCSCSTTCCHHHHTTC---CBCSHHHHHHHHHHHH
T ss_pred EEecC-------CCeEEEeccchhhccccc-----------cccccCCCcCeEChhhccCC---CCCCCcceehhhHHHH
Confidence 99887 789999999997654321 11234699999999999862 2346899999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|+.||.+....++...+..+.... + ...++.+.+||.+||+.||.+|
T Consensus 207 ~elltG~~Pf~~~~~~~~~~~i~~~~~~~-p---------------------------~~~s~~~~~Li~~~L~~dP~~R 258 (476)
T 2y94_A 207 YALLCGTLPFDDDHVPTLFKKICDGIFYT-P---------------------------QYLNPSVISLLKHMLQVDPMKR 258 (476)
T ss_dssp HHHHHSSCSSCCSSSHHHHHHHHTTCCCC-C---------------------------TTCCHHHHHHHHHHTCSSTTTS
T ss_pred HHHhhCCCCCCCCCHHHHHHHHhcCCcCC-C---------------------------ccCCHHHHHHHHHHcCCCchhC
Confidence 99999999999877777776665443211 0 0345678999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
||+.|+++|+|+...
T Consensus 259 pt~~eil~hp~~~~~ 273 (476)
T 2y94_A 259 ATIKDIREHEWFKQD 273 (476)
T ss_dssp CCHHHHHTCHHHHTT
T ss_pred cCHHHHHhCHHhhhc
Confidence 999999999999753
No 93
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.5e-38 Score=351.18 Aligned_cols=265 Identities=24% Similarity=0.304 Sum_probs=208.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|++. +..+|+|+........... ......+.+|+.++++++||||+++++++.+..
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 81 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRR--GVSREEIEREVNILREIRHPNIITLHDIFENKT- 81 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSS--SBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhcccccccc--chHHHHHHHHHHHHHhCCCCCeeehhheecCCC-
Confidence 35899999999999999999985 6778888865443221111 001123479999999999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 82 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~ 143 (283)
T 3bhy_A 82 -------------DVVLILELVSGGELFDFLAE-----KESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLD 143 (283)
T ss_dssp -------------EEEEEEECCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESC
T ss_pred -------------eEEEEEeecCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEec
Confidence 35999999999999999976 246999999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
++ .....+||+|||.+........ .....||+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 144 ~~---~~~~~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 205 (283)
T 3bhy_A 144 KN---VPNPRIKLIDFGIAHKIEAGNE-----------FKNIFGTPEFVAPEIVNY----EPLGLEADMWSIGVITYILL 205 (283)
T ss_dssp SS---SSSCCEEECCCTTCEECC-------------------CCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CC---CCCCceEEEecccceeccCCCc-----------ccccCCCcCccCcceecC----CCCCcchhhhhHHHHHHHHH
Confidence 62 1113799999999976543211 123458999999999876 56789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||.+....+....+.......... .....+..+.+++.+||..||.+|||+.
T Consensus 206 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ 261 (283)
T 3bhy_A 206 SGASPFLGETKQETLTNISAVNYDFDEE------------------------YFSNTSELAKDFIRRLLVKDPKRRMTIA 261 (283)
T ss_dssp HSSCTTCCSSHHHHHHHHHTTCCCCCHH------------------------HHTTCCHHHHHHHHTTSCSSGGGSCCHH
T ss_pred HCCCCCCCcchHHHHHHhHhcccCCcch------------------------hcccCCHHHHHHHHHHccCCHhHCcCHH
Confidence 9999999877777666665443221111 1114566799999999999999999999
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
|+++|+|+..
T Consensus 262 ~~l~h~~~~~ 271 (283)
T 3bhy_A 262 QSLEHSWIKA 271 (283)
T ss_dssp HHHHCHHHHH
T ss_pred HHHhCHHHHH
Confidence 9999999874
No 94
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.1e-38 Score=349.29 Aligned_cols=255 Identities=23% Similarity=0.305 Sum_probs=207.4
Q ss_pred CCCceEeeeecccCceEEEEEEECCc-cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSA-DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~-~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.++|++.+.||+|+||.||+|.+.+. .+|+|+.... ... .+. +.+|+.++++++||||+++++++.+...
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~---~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 77 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEG--SMS---EDE----FFQEAQTMMKLSHPKLVKFYGVCSKEYP 77 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBT--TBC---HHH----HHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccC--CCc---HHH----HHHHHHHHHhCCCCCEeeEEEEEccCCc
Confidence 46799999999999999999998654 6888876432 111 123 3789999999999999999999876543
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+||+++.
T Consensus 78 --------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~ 139 (268)
T 3sxs_A 78 --------------IYIVTEYISNGCLLNYLRSH----GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDR 139 (268)
T ss_dssp --------------EEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECT
T ss_pred --------------eEEEEEccCCCcHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECC
Confidence 49999999999999999762 235999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.+......... ......+|+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 140 ~-------~~~~l~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 199 (268)
T 3sxs_A 140 D-------LCVKVSDFGMTRYVLDDQYV---------SSVGTKFPVKWSAPEVFHY----FKYSSKSDVWAFGILMWEVF 199 (268)
T ss_dssp T-------CCEEECCTTCEEECCTTCEE---------ECCSCCCCGGGCCHHHHHH----SEEETTHHHHHHHHHHHHHH
T ss_pred C-------CCEEEccCccceecchhhhh---------cccCCCcCcccCCHHHHhc----cCCchhhhhHHHHHHHHHHH
Confidence 7 78999999999765432211 1112346788999999976 45789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |+.||......+....+..+.....+. ..++.+.+++.+||+.||.+|||+
T Consensus 200 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps~ 252 (268)
T 3sxs_A 200 SLGKMPYDLYTNSEVVLKVSQGHRLYRPH---------------------------LASDTIYQIMYSCWHELPEKRPTF 252 (268)
T ss_dssp TTTCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHTTCSSGGGSCCH
T ss_pred cCCCCCccccChHHHHHHHHcCCCCCCCC---------------------------cChHHHHHHHHHHcCCChhhCcCH
Confidence 9 999999887777766665544322211 345579999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
.|+++++....
T Consensus 253 ~~ll~~L~~l~ 263 (268)
T 3sxs_A 253 QQLLSSIEPLR 263 (268)
T ss_dssp HHHHHHHGGGC
T ss_pred HHHHHHHHHhh
Confidence 99999997654
No 95
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=1.5e-38 Score=365.81 Aligned_cols=257 Identities=24% Similarity=0.260 Sum_probs=203.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~ 881 (1141)
.++|++.+.||+|+||.||+|.+. +..+|+|+..... . .. .+|++++.++ +||||+++++++.+.
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~--~------~~----~~E~~~l~~~~~hp~iv~~~~~~~~~ 88 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK--R------DP----TEEIEILLRYGQHPNIITLKDVYDDG 88 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT--C------CC----HHHHHHHHHHTTSTTBCCEEEEEECS
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc--C------Ch----HHHHHHHHHhcCCCCcCeEEEEEEcC
Confidence 346999999999999999999985 5668888754221 1 11 4788888888 799999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..|+||||++||+|.+++.. ...+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 89 ~--------------~~~lv~E~~~gg~L~~~i~~-----~~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~ 149 (342)
T 2qr7_A 89 K--------------YVYVVTELMKGGELLDKILR-----QKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILY 149 (342)
T ss_dssp S--------------EEEEEECCCCSCBHHHHHHT-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE
T ss_pred C--------------EEEEEEeCCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEE
Confidence 5 45999999999999999975 3469999999999999999999999999999999999998
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
..+. ...+.+||+|||+++....... ......||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 150 ~~~~---~~~~~~kl~Dfg~a~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~e 212 (342)
T 2qr7_A 150 VDES---GNPESIRICDFGFAKQLRAENG----------LLMTPCYTANFVAPEVLER----QGYDAACDIWSLGVLLYT 212 (342)
T ss_dssp SSSS---CSGGGEEECCCTTCEECBCTTC----------CBCCSSCCSSCCCHHHHHH----HHHHHHHHHHHHHHHHHH
T ss_pred ecCC---CCcCeEEEEECCCcccCcCCCC----------ceeccCCCccccCHHHhcC----CCCCCccCeeeHhHHHHH
Confidence 5431 1114699999999976543211 1123468999999999976 347789999999999999
Q ss_pred HHhCCCCCCC---CCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1042 LLTLQVPYMG---LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1042 LLTGk~Pf~~---~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|++|..||.+ ....++...+..+........ ....++++.+||.+||..||++
T Consensus 213 ll~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~------------------------~~~~s~~~~~li~~~L~~dP~~ 268 (342)
T 2qr7_A 213 MLTGYTPFANGPDDTPEEILARIGSGKFSLSGGY------------------------WNSVSDTAKDLVSKMLHVDPHQ 268 (342)
T ss_dssp HHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTT------------------------TTTSCHHHHHHHHHHTCSSTTT
T ss_pred HhcCCCCCCCCCcCCHHHHHHHHccCCcccCccc------------------------cccCCHHHHHHHHHHCCCChhH
Confidence 9999999975 345556666655443211100 0145677999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001143 1119 RPTAGDLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~ 1133 (1141)
|||+.|+++|+|+..
T Consensus 269 R~t~~~il~hp~~~~ 283 (342)
T 2qr7_A 269 RLTAALVLRHPWIVH 283 (342)
T ss_dssp SCCHHHHTTSHHHHT
T ss_pred CcCHHHHhcCCeecC
Confidence 999999999999964
No 96
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=3e-38 Score=350.81 Aligned_cols=256 Identities=25% Similarity=0.336 Sum_probs=205.8
Q ss_pred CCCCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
....+|++.+.||+|+||.||+|.+.+ ..+|+|+.... ... .+. +.+|+.++++++||||+++++++.+.
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~--~~~---~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~ 91 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG--SMS---EDE----FIEEAKVMMNLSHEKLVQLYGVCTKQ 91 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTT--SBC---HHH----HHHHHHHHHTCCCTTBCCEEEEECSS
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCC--CCC---HHH----HHHHHHHHhcCCCCCEeeEEEEEecC
Confidence 345689999999999999999999864 46888876422 111 123 37999999999999999999999765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. .++||||+++++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+||++
T Consensus 92 ~~--------------~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili 153 (283)
T 3gen_A 92 RP--------------IFIITEYMANGCLLNYLREM----RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV 153 (283)
T ss_dssp SS--------------EEEEECCCTTCBHHHHHHCG----GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE
T ss_pred CC--------------eEEEEeccCCCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE
Confidence 53 49999999999999999752 2369999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||++......... ......+|+.|+|||++.+ ..++.++||||||+++|+
T Consensus 154 ~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~~l~~ 213 (283)
T 3gen_A 154 NDQ-------GVVKVSDFGLSRYVLDDEYT---------SSVGSKFPVRWSPPEVLMY----SKFSSKSDIWAFGVLMWE 213 (283)
T ss_dssp CTT-------SCEEECSTTGGGGBCCHHHH---------STTSTTSCGGGCCHHHHHH----CCCSHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEccccccccccccccc---------cccCCccCcccCCHHHhcc----CCCCchhhHHHHHHHHHH
Confidence 887 78999999999765432211 1112347888999999986 468899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++ |+.||......+....+..+.....+. ..++.+.+++.+||+.||.+||
T Consensus 214 l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rp 266 (283)
T 3gen_A 214 IYSLGKMPYERFTNSETAEHIAQGLRLYRPH---------------------------LASEKVYTIMYSCWHEKADERP 266 (283)
T ss_dssp HHTTTCCTTTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSGGGSC
T ss_pred HHhCCCCCccccChhHHHHHHhcccCCCCCC---------------------------cCCHHHHHHHHHHccCChhHCc
Confidence 998 999999888777777765544332211 3345799999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001143 1121 TAGDLYEMFVAR 1132 (1141)
Q Consensus 1121 Sa~ElL~~L~~~ 1132 (1141)
|+.++++++...
T Consensus 267 s~~~ll~~L~~~ 278 (283)
T 3gen_A 267 TFKILLSNILDV 278 (283)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999998764
No 97
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.4e-38 Score=356.55 Aligned_cols=290 Identities=20% Similarity=0.234 Sum_probs=207.4
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.++||+|+||+||+|.+. +..||+|+....... ...+ .+.+|+.++++++||||+++++++.....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~---~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 81 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL---RPVD----VQMREFEVLKKLNHKNIVKLFAIEEETTT 81 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG---SCHH----HHHHHHHHHHHCCCTTBCCEEEEEECTTT
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEecccccc---chHH----HHHHHHHHHHhcCCCCcceEEEEeecCCC
Confidence 46999999999999999999996 667888876432211 1122 23789999999999999999999876431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
...++||||+++++|.+++.... ....+++..++.|+.||+.||.|||++||+||||||+|||+..
T Consensus 82 ------------~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~ 147 (319)
T 4euu_A 82 ------------RHKVLIMEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147 (319)
T ss_dssp ------------CCEEEEEECCTTCBHHHHHHSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE
T ss_pred ------------ceEEEEEeCCCCCCHHHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEec
Confidence 14599999999999999998632 2234999999999999999999999999999999999999822
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc----CCCCCCchhhHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH----KPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~~~~~s~ksDVWSLGviL 1039 (1141)
.. ...+.+||+|||+++....... .....||+.|+|||++.... ....++.++|||||||++
T Consensus 148 ~~---~~~~~~kL~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il 213 (319)
T 4euu_A 148 GE---DGQSVYKLTDFGAARELEDDEQ-----------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213 (319)
T ss_dssp CT---TSCEEEEECCCTTCEECCTTCC-----------BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHH
T ss_pred cC---CCCceEEEccCCCceecCCCCc-----------eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHH
Confidence 10 1127899999999976543221 12346899999999986311 125678999999999999
Q ss_pred HHHHhCCCCCCCCC----HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1040 LELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|||++|+.||.... ..+....+..+..+............... + ..... .........+..+.+++.+||+.|
T Consensus 214 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~-~~~~~-~~~~~~~~~~~~l~~ll~~~L~~d 290 (319)
T 4euu_A 214 YHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPID-W-SGDMP-VSCSLSRGLQVLLTPVLANILEAD 290 (319)
T ss_dssp HHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEE-E-ESSCC-TTCSSCHHHHHHHHHHHHHHSCCC
T ss_pred HHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccc-c-CccCC-cccccchhHHHHhHHHHHHhccCC
Confidence 99999999996422 23344444433332221111100000000 0 00000 011122367788999999999999
Q ss_pred CCCCCCHHHHHHHHHhhc
Q 001143 1116 PTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~~ 1133 (1141)
|++|||++|+++|+.-..
T Consensus 291 P~~R~s~~ell~h~~d~~ 308 (319)
T 4euu_A 291 QEKCWGFDQFFAETSDIL 308 (319)
T ss_dssp TTTSCCHHHHHHHHHHHT
T ss_pred hhhhccHHHhhhccHHHh
Confidence 999999999999997653
No 98
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=2.8e-38 Score=351.55 Aligned_cols=265 Identities=23% Similarity=0.325 Sum_probs=193.8
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
..++|++.+.||+|+||+||+|++ .+..+|+|+.... .. ...... .+..+...++.++||||+++++++.+.
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~-~~~~~~---~~~~~~~~~~~~~h~~iv~~~~~~~~~ 78 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT--VN-SQEQKR---LLMDLDISMRTVDCPFTVTFYGALFRE 78 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC-----C-HHHHHH---HHHHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecc--cC-cHHHHH---HHHHHHHHHHhCCCCeEEEEeeeeecc
Confidence 356799999999999999999998 5667788875422 11 122121 124455557888999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCCee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENIL 960 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~NIL 960 (1141)
+. .++||||++ ++|.+++...... ...+++..++.|+.||+.||.|||++ ||+||||||+||+
T Consensus 79 ~~--------------~~lv~e~~~-~~l~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil 142 (290)
T 3fme_A 79 GD--------------VWICMELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVL 142 (290)
T ss_dssp SS--------------EEEEEECCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCE
T ss_pred CC--------------EEEEEehhc-cchHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEE
Confidence 53 499999997 6998888764333 35799999999999999999999998 9999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||++........ .....||+.|+|||++........++.++|||||||++|
T Consensus 143 ~~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~ 204 (290)
T 3fme_A 143 INAL-------GQVKMCDFGISGYLVDDVA-----------KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 204 (290)
T ss_dssp ECTT-------CCEEBCCC--------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHH
T ss_pred ECCC-------CCEEEeecCCccccccccc-----------ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHH
Confidence 9887 7899999999976543211 123358999999999853323456889999999999999
Q ss_pred HHHhCCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1041 ELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1041 ELLTGk~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|++|+.||... ..............+.... ...+..+.+++.+||+.||.+|
T Consensus 205 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~~p~~R 258 (290)
T 3fme_A 205 ELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA--------------------------DKFSAEFVDFTSQCLKKNSKER 258 (290)
T ss_dssp HHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCT--------------------------TTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHCCCCccccCchHHHHHHHhccCCCCccc--------------------------ccCCHHHHHHHHHHhhcChhhC
Confidence 999999999753 3333333332222221110 1445679999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
||+.|+++|+|+...
T Consensus 259 pt~~e~l~hp~f~~~ 273 (290)
T 3fme_A 259 PTYPELMQHPFFTLH 273 (290)
T ss_dssp CCHHHHTTSHHHHHH
T ss_pred cCHHHHHhCcccccC
Confidence 999999999999753
No 99
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=4.8e-38 Score=349.46 Aligned_cols=258 Identities=21% Similarity=0.336 Sum_probs=194.5
Q ss_pred CCCCceEeeeecccCceEEEEEEECC---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~---~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
...+|++.+.||+|+||.||+|.+.. ....++++..... ......+ .+.+|+.++++++||||+++++++.+
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~----~~~~e~~~l~~l~h~~iv~~~~~~~~ 87 (281)
T 1mp8_A 13 QRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVRE----KFLQEALTMRQFDHPHIVKLIGVITE 87 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHH----HHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred ehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHH----HHHHHHHHHHhCCCCccceEEEEEcc
Confidence 34679999999999999999999843 2233333333322 1222223 34899999999999999999999753
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
. ..++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 88 ~---------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil 148 (281)
T 1mp8_A 88 N---------------PVWIIMELCTLGELRSFLQV----RKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVL 148 (281)
T ss_dssp S---------------SCEEEEECCTTEEHHHHHHH----TTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred C---------------ccEEEEecCCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEE
Confidence 2 23899999999999999975 1336999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||+++........ ......+|+.|+|||++.+ ..++.++|||||||++|
T Consensus 149 ~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l~ 208 (281)
T 1mp8_A 149 VSSN-------DCVKLGDFGLSRYMEDSTYY---------KASKGKLPIKWMAPESINF----RRFTSASDVWMFGVCMW 208 (281)
T ss_dssp EEET-------TEEEECC----------------------------CCGGGCCHHHHHH----CCCSHHHHHHHHHHHHH
T ss_pred ECCC-------CCEEECccccccccCccccc---------ccccCCCcccccChhhccc----CCCCCccCchHHHHHHH
Confidence 9987 78999999999765432111 1123347789999999976 56889999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1041 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1041 ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|++ |..||.+....+....+..+..+..+ ...++.+.+++.+||+.||.+|
T Consensus 209 ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~p~~R 261 (281)
T 1mp8_A 209 EILMHGVKPFQGVKNNDVIGRIENGERLPMP---------------------------PNCPPTLYSLMTKCWAYDPSRR 261 (281)
T ss_dssp HHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGS
T ss_pred HHHhcCCCCCCcCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHccCChhhC
Confidence 9997 99999887776666666554432221 1455679999999999999999
Q ss_pred CCHHHHHHHHHhh
Q 001143 1120 PTAGDLYEMFVAR 1132 (1141)
Q Consensus 1120 PSa~ElL~~L~~~ 1132 (1141)
||+.|+++++...
T Consensus 262 ps~~~l~~~l~~~ 274 (281)
T 1mp8_A 262 PRFTELKAQLSTI 274 (281)
T ss_dssp CCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHH
Confidence 9999999998754
No 100
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1.6e-38 Score=359.67 Aligned_cols=280 Identities=24% Similarity=0.281 Sum_probs=200.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+.+|++.+.||+|+||.||+|++. +..||+|+..... .....+. +.+|+.++++++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~---~~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~ 77 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN---RELAREK----VMREVKALAKLEHPGIVRYFNAWLETP 77 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS---TTTHHHH----HHHHHHHHTSCCCTTBCCEEEEEEECC
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC---chhHHHH----HHHHHHHHHhCCCCCEeeEEEEEEEec
Confidence 356899999999999999999984 6678888865432 1122233 489999999999999999999986543
Q ss_pred CCC-----------C--------------------------------CCCCCccccceEEEEEeeccCCCHHHHHHHhhh
Q 001143 883 WLP-----------S--------------------------------ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE 919 (1141)
Q Consensus 883 ~~~-----------~--------------------------------~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~ 919 (1141)
... . ............++||||+++++|.+++....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~- 156 (332)
T 3qd2_B 78 PEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRC- 156 (332)
T ss_dssp SCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCC-
T ss_pred cchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhccc-
Confidence 100 0 00000111234799999999999999998622
Q ss_pred cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccc--cC
Q 001143 920 TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA--HR 997 (1141)
Q Consensus 920 ~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~--~~ 997 (1141)
.....++..++.|+.||+.||.|||++||+||||||+|||++.+ +.+||+|||+++............ ..
T Consensus 157 -~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-------~~~kL~DfG~a~~~~~~~~~~~~~~~~~ 228 (332)
T 3qd2_B 157 -SLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMD-------DVVKVGDFGLVTAMDQDEEEQTVLTPMP 228 (332)
T ss_dssp -SGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTT-------CCEEECCCTTCEECSCC-----------
T ss_pred -CccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCC-------CCEEEeecCcccccccchhhcccccccc
Confidence 22346777899999999999999999999999999999999887 789999999998765432110000 00
Q ss_pred CCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhc
Q 001143 998 GIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALG 1077 (1141)
Q Consensus 998 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~ 1077 (1141)
.........||+.|+|||++.+ ..++.++|||||||++|+|++|..|+.. .......+.....+.
T Consensus 229 ~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~~~~--------- 293 (332)
T 3qd2_B 229 AYATHTGQVGTKLYMSPEQIHG----NNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLKFPL--------- 293 (332)
T ss_dssp ---CCCSCC-CGGGSCHHHHHC----CCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTCCCH---------
T ss_pred ccccccccCCCcCccChHHhcC----CCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccCCCc---------
Confidence 0112234569999999999986 5688999999999999999998766531 122223333222211
Q ss_pred cCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1078 SCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1078 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.....++.+.+++.+||+.||.+|||+.|+++|+|+..
T Consensus 294 ------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~ 331 (332)
T 3qd2_B 294 ------------------LFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN 331 (332)
T ss_dssp ------------------HHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred ------------------ccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence 11244566899999999999999999999999999863
No 101
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=3.7e-38 Score=380.84 Aligned_cols=268 Identities=22% Similarity=0.287 Sum_probs=211.4
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCC-----hHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSS-----ADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~-----~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
..+|++.++||+|+||+||+|.+. +..+|+|+......... ....+.....+.+|+.++++++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 457999999999999999999984 56788888653321110 01112233455899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+.+.. ..++||||++||+|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+
T Consensus 115 ~~~~~--------------~~~lv~e~~~gg~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~ 175 (504)
T 3q5i_A 115 FEDKK--------------YFYLVTEFYEGGELFEQIIN-----RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPE 175 (504)
T ss_dssp EECSS--------------EEEEEEECCTTCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred EEcCC--------------EEEEEEecCCCCcHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHH
Confidence 98655 35999999999999999876 246999999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||++.++ ....+||+|||++....... ......||+.|+|||++.+ .++.++||||+||
T Consensus 176 Nil~~~~~----~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~ 235 (504)
T 3q5i_A 176 NILLENKN----SLLNIKIVDFGLSSFFSKDY-----------KLRDRLGTAYYIAPEVLKK-----KYNEKCDVWSCGV 235 (504)
T ss_dssp GEEESSTT----CCSSEEECCCTTCEECCTTS-----------CBCCCCSCTTTCCHHHHTT-----CBCTHHHHHHHHH
T ss_pred HEEEecCC----CCccEEEEECCCCEEcCCCC-----------ccccccCCcCCCCHHHhcc-----CCCchHHHHHHHH
Confidence 99998752 11369999999997654321 1123469999999999864 5789999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1038 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
++|+|++|..||.+.+..++...+..+........+ ...++++.+||.+||++||.
T Consensus 236 il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~ 291 (504)
T 3q5i_A 236 IMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDW------------------------KNISDEAKELIKLMLTYDYN 291 (504)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHH------------------------TTSCHHHHHHHHHHTCSSTT
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCcccc------------------------CCCCHHHHHHHHHHcCCChh
Confidence 999999999999998888888887665543221111 14567799999999999999
Q ss_pred CCCCHHHHHHHHHhhcCC
Q 001143 1118 ERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~~s 1135 (1141)
+|||+.|+++|+|++...
T Consensus 292 ~R~t~~e~l~h~~~~~~~ 309 (504)
T 3q5i_A 292 KRCTAEEALNSRWIKKYA 309 (504)
T ss_dssp TSCCHHHHHTSHHHHHTC
T ss_pred HCCCHHHHhcCHhhhhch
Confidence 999999999999997543
No 102
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.7e-38 Score=381.53 Aligned_cols=261 Identities=24% Similarity=0.319 Sum_probs=211.8
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||.||+|++. +..+|+|+........ ....+. +.+|+.++++++||||+++++++.+..
T Consensus 26 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~- 99 (484)
T 3nyv_A 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQ-KTDKES----LLREVQLLKQLDHPNIMKLYEFFEDKG- 99 (484)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCB-SSCHHH----HHHHHHHHTTCCCTTBCCEEEEEECSS-
T ss_pred CceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhccc-chHHHH----HHHHHHHHHhCCCCCCCcEEEEEEeCC-
Confidence 46999999999999999999984 6678888865332211 112223 379999999999999999999998755
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+.+++|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|||++.
T Consensus 100 -------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~ 161 (484)
T 3nyv_A 100 -------------YFYLVGEVYTGGELFDEIIS-----RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLES 161 (484)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHT-----CSCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESS
T ss_pred -------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEec
Confidence 34999999999999999875 346999999999999999999999999999999999999954
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
.. ..+.+||+|||++........ .....||+.|+|||++.+ .++.++|||||||++|+|+
T Consensus 162 ~~----~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~~ll 221 (484)
T 3nyv_A 162 KS----KDANIRIIDFGLSTHFEASKK-----------MKDKIGTAYYIAPEVLHG-----TYDEKCDVWSTGVILYILL 221 (484)
T ss_dssp SS----TTCCEEECCTTHHHHBCCCCS-----------HHHHTTGGGTCCHHHHHT-----CCCTHHHHHHHHHHHHHHH
T ss_pred CC----CCCcEEEEeeeeeEEcccccc-----------cccCCCCccccCceeecC-----CCCCcceeHHHHHHHHHHH
Confidence 21 127899999999976543211 123469999999999875 5789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||.+.+..++...+..+........+ ...++.+.+||.+||+.||.+|||+.
T Consensus 222 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~s~~~~~li~~~L~~dp~~R~s~~ 277 (484)
T 3nyv_A 222 SGCPPFNGANEYDILKKVEKGKYTFELPQW------------------------KKVSESAKDLIRKMLTYVPSMRISAR 277 (484)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCSGGG------------------------GGSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHcCCCCCCCccc------------------------ccCCHHHHHHHHHHCCCChhHCcCHH
Confidence 999999998888888877665432211100 14567799999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001143 1124 DLYEMFVARTS 1134 (1141)
Q Consensus 1124 ElL~~L~~~~~ 1134 (1141)
|+++|+|+...
T Consensus 278 e~l~h~~~~~~ 288 (484)
T 3nyv_A 278 DALDHEWIQTY 288 (484)
T ss_dssp HHHTSHHHHHH
T ss_pred HHhhChhhccc
Confidence 99999999753
No 103
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=366.17 Aligned_cols=258 Identities=24% Similarity=0.273 Sum_probs=193.5
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
+.|++.+.||+|+||.||+|++. +..||+|+.... ...+. +.+|+.++++++||||+++++++.+..
T Consensus 53 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~------~~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~- 121 (349)
T 2w4o_A 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKT------VDKKI----VRTEIGVLLRLSHPNIIKLKEIFETPT- 121 (349)
T ss_dssp GTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------------CHHHHHCCCTTBCCEEEEEECSS-
T ss_pred CcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccc------hhHHH----HHHHHHHHHhCCCCCCcceeeeEecCC-
Confidence 45999999999999999999995 456788875422 11222 378999999999999999999998654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ...+++.++..++.||+.||.|||++||+||||||+|||++.
T Consensus 122 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~ 183 (349)
T 2w4o_A 122 -------------EISLVLELVTGGELFDRIVE-----KGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYAT 183 (349)
T ss_dssp -------------EEEEEECCCCSCBHHHHHTT-----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESS
T ss_pred -------------eEEEEEEeCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEec
Confidence 35999999999999999865 346999999999999999999999999999999999999975
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
.. ..+.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 184 ~~----~~~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ell 244 (349)
T 2w4o_A 184 PA----PDAPLKIADFGLSKIVEHQV-----------LMKTVCGTPGYCAPEILRG----CAYGPEVDMWSVGIITYILL 244 (349)
T ss_dssp SS----TTCCEEECCCC---------------------------CGGGSCHHHHTT----CCCCTHHHHHHHHHHHHHHH
T ss_pred CC----CCCCEEEccCccccccCccc-----------ccccccCCCCccCHHHhcC----CCCCcccchHHHHHHHHHHH
Confidence 21 12789999999997643311 1123468999999999986 56889999999999999999
Q ss_pred hCCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 TLQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 TGk~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+|..||......+ ....+.......... .....+..+.+||.+||+.||++|||+
T Consensus 245 ~g~~pf~~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~ 300 (349)
T 2w4o_A 245 CGFEPFYDERGDQFMFRRILNCEYYFISP------------------------WWDEVSLNAKDLVRKLIVLDPKKRLTT 300 (349)
T ss_dssp HSSCTTCCTTCHHHHHHHHHTTCCCCCTT------------------------TTTTSCHHHHHHHHTTSCSSGGGSCCH
T ss_pred hCCCCCCCCcccHHHHHHHHhCCCccCCc------------------------hhhhCCHHHHHHHHHHccCChhhCcCH
Confidence 9999997655443 444544333221110 001456679999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 001143 1123 GDLYEMFVARTSS 1135 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s 1135 (1141)
.|+++|+|+....
T Consensus 301 ~e~l~hp~~~~~~ 313 (349)
T 2w4o_A 301 FQALQHPWVTGKA 313 (349)
T ss_dssp HHHHHSTTTTSTT
T ss_pred HHHhcCcccCCCc
Confidence 9999999997654
No 104
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=5.2e-38 Score=351.35 Aligned_cols=285 Identities=19% Similarity=0.275 Sum_probs=207.6
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
++++|++.+.||+|+||.||+|++. +..+|+|+..... .... ....+.+|+.++++++||||+++++++...
T Consensus 1 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 74 (299)
T 2r3i_A 1 XMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT--ETEG----VPSTAIREISLLKELNHPNIVKLLDVIHTE 74 (299)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------------CCHHHHHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred CcchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCc--cchh----hHHHHHHHHHHHHHcCCCCeeeEEEEEecC
Confidence 3678999999999999999999985 5677777754321 1111 122347899999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+ ..++||||++ ++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 75 ~--------------~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili 136 (299)
T 2r3i_A 75 N--------------KLYLVFEFLH-QDLKKFMDA---SALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI 136 (299)
T ss_dssp T--------------EEEEEEECCS-EEHHHHHHH---TTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE
T ss_pred C--------------ceEEEEEccc-CCHHHHHHh---hhccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEE
Confidence 4 3499999998 699999976 223468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||.+........ ......+|+.|+|||++.+ ...++.++|||||||++|+
T Consensus 137 ~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~~l~~ 196 (299)
T 2r3i_A 137 NTE-------GAIKLADFGLARAFGVPVR----------TYTHEVVTLWYRAPEILLG---AKYYSTAVDIWSLGCIFAE 196 (299)
T ss_dssp CTT-------SCEEECSTTHHHHHCCCSB----------CTTSCBCCCTTCCHHHHTT---CSSCCTHHHHHHHHHHHHH
T ss_pred cCC-------CCEEECcchhhhhccCCcc----------ccCcccccccccCcHHhhc---cccCChHHHHHHHHHHHHH
Confidence 887 7899999999976543211 1123468999999999876 2347899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCc---hhhhhhHHHHHHHHHHhcccCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKP---EAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
|++|+.||.+....+....+.. ...+... .+....... ............ ......+.++.+++.+||+.||+
T Consensus 197 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 273 (299)
T 2r3i_A 197 MVTRRALFPGDSEIDQLFRIFRTLGTPDEV-VWPGVTSMP--DYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPN 273 (299)
T ss_dssp HHHSSCSCCCSSHHHHHHHHHHHHCCCCTT-TSTTGGGST--TCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTT
T ss_pred HHhCCCCCCCccHHHHHHHHHHHhCCCchh-hhhHhhcCc--ccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcc
Confidence 9999999998777665554422 1111110 000000000 000000000000 01124567899999999999999
Q ss_pred CCCCHHHHHHHHHhhcCC
Q 001143 1118 ERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~~s 1135 (1141)
+|||+.|+++|+|+....
T Consensus 274 ~Rpt~~~~l~hp~~~~~~ 291 (299)
T 2r3i_A 274 KRISAKAALAHPFFQDVT 291 (299)
T ss_dssp TSCCHHHHHTSGGGTTCC
T ss_pred cCCCHHHHhcChhhhcCC
Confidence 999999999999997543
No 105
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.6e-38 Score=355.15 Aligned_cols=251 Identities=26% Similarity=0.278 Sum_probs=194.9
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~ 882 (1141)
++|++.++||+|+||+||+|++. +..||+|+.. ............ ..|+..+.++ +||||+++++++.+..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~--~~~~~~~~~~~~----~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSM--SPFRGPKDRARK----LAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEES--SSCCSHHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEec--ccccChHHHHHH----HHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 45999999999999999999985 6677888643 222233322222 5666666555 8999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+ +++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 131 --------------~~~lv~e~~-~~~L~~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~ 191 (311)
T 3p1a_A 131 --------------ILYLQTELC-GPSLQQHCEAW----GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG 191 (311)
T ss_dssp --------------EEEEEEECC-CCBHHHHHHHH----CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEecc-CCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC
Confidence 359999999 58999998762 34699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++....... ......||+.|+|||++.+ .++.++|||||||++|||
T Consensus 192 ~~-------~~~kl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~-----~~~~~~DiwslG~il~el 248 (311)
T 3p1a_A 192 PR-------GRCKLGDFGLLVELGTAG-----------AGEVQEGDPRYMAPELLQG-----SYGTAADVFSLGLTILEV 248 (311)
T ss_dssp GG-------GCEEECCCTTCEECC-----------------CCCCCGGGCCGGGGGT-----CCSTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccceeeeecccCC-----------CCcccCCCccccCHhHhcC-----CCCchhhHHHHHHHHHHH
Confidence 87 789999999987654321 1123459999999999874 578999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|..|+.+. .....+..+..+ +......+..+.+++.+||+.||++|||+
T Consensus 249 ~~g~~~~~~~---~~~~~~~~~~~~--------------------------~~~~~~~~~~l~~li~~~L~~dP~~Rpt~ 299 (311)
T 3p1a_A 249 ACNMELPHGG---EGWQQLRQGYLP--------------------------PEFTAGLSSELRSVLVMMLEPDPKLRATA 299 (311)
T ss_dssp HHTCCCCSSH---HHHHHHTTTCCC--------------------------HHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred HhCCCCCCCc---cHHHHHhccCCC--------------------------cccccCCCHHHHHHHHHHcCCChhhCcCH
Confidence 9997766542 222333222211 11112456789999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
.|+++|+|++.
T Consensus 300 ~ell~hp~~~~ 310 (311)
T 3p1a_A 300 EALLALPVLRQ 310 (311)
T ss_dssp HHHHTSGGGSC
T ss_pred HHHHhCccccC
Confidence 99999999975
No 106
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=4.8e-38 Score=347.57 Aligned_cols=260 Identities=23% Similarity=0.258 Sum_probs=203.3
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
....+|++.+.||+|+||.||+|.+. +..+++|+..... .........+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~ 82 (276)
T 2h6d_A 8 VKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQK-----IRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST 82 (276)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred ceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEecccc-----ccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec
Confidence 34678999999999999999999985 6778888865321 1111223345899999999999999999999886
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..++||||+++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+
T Consensus 83 ~~--------------~~~lv~e~~~~~~L~~~l~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil 143 (276)
T 2h6d_A 83 PT--------------DFFMVMEYVSGGELFDYICKH-----GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVL 143 (276)
T ss_dssp SS--------------EEEEEEECCCSCBHHHHHHHH-----CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEE
T ss_pred CC--------------eEEEEEeccCCCcHHHHHhcc-----CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEE
Confidence 54 359999999999999999762 36899999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||.+....... ......||+.|+|||++.+. ...+.++||||||+++|
T Consensus 144 ~~~~-------~~~~l~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG~~l~ 202 (276)
T 2h6d_A 144 LDAH-------MNAKIADFGLSNMMSDGE-----------FLRTSCGSPNYAAPEVISGR---LYAGPEVDIWSCGVILY 202 (276)
T ss_dssp ECTT-------SCEEECCCCGGGCCCC------------------------CCTGGGTTS---CCCHHHHHHHHHHHHHH
T ss_pred ECCC-------CCEEEeecccccccCCCc-----------ceecccCCccccCHHHHcCC---CCCCccchHHHHHHHHH
Confidence 9887 789999999987654321 11234589999999998761 23368999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|+.||......+....+..+.... + ...+..+.+++.+||+.||.+||
T Consensus 203 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~-~---------------------------~~~~~~l~~li~~~l~~~p~~Rp 254 (276)
T 2h6d_A 203 ALLCGTLPFDDEHVPTLFKKIRGGVFYI-P---------------------------EYLNRSVATLLMHMLQVDPLKRA 254 (276)
T ss_dssp HHHHSSCSSCCSSHHHHHHHHHHCCCCC-C---------------------------TTSCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHhCCCCCCCCcHHHHHHHhhcCcccC-c---------------------------hhcCHHHHHHHHHHccCChhhCC
Confidence 9999999998877766666665433211 0 03455689999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001143 1121 TAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~s 1135 (1141)
|+.|+++|+|+....
T Consensus 255 s~~~~l~h~~~~~~~ 269 (276)
T 2h6d_A 255 TIKDIREHEWFKQDL 269 (276)
T ss_dssp CHHHHHHSHHHHTTC
T ss_pred CHHHHHhChhhccCc
Confidence 999999999997653
No 107
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=3.1e-38 Score=349.42 Aligned_cols=262 Identities=22% Similarity=0.238 Sum_probs=200.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~ 882 (1141)
.+|++.+.||+|+||+||+|.+. +..+|+|+.... ......... +.+|+..+.++ +||||+++++++.+.+
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~----~~~e~~~~~~l~~h~~iv~~~~~~~~~~ 84 (289)
T 1x8b_A 11 TEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP--LAGSVDEQN----ALREVYAHAVLGQHSHVVRYFSAWAEDD 84 (289)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--CTTSHHHHH----HHHHHHHHHHSCSCTTBCCEEEEEEETT
T ss_pred chhhhhhhhcCCCceEEEEEEEcCCCceEEEEEeccc--ccccHHHHH----HHHHHHHHHHhCCCCCeeeeeeeeecCC
Confidence 56999999999999999999985 677888876533 222233333 37899999999 8999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++...... ...+++..++.|+.||+.||.|||++||+||||||+|||++
T Consensus 85 --------------~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~ 149 (289)
T 1x8b_A 85 --------------HMLIQNEYCNGGSLADAISENYRI-MSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFIS 149 (289)
T ss_dssp --------------EEEEEEECCTTCBHHHHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------eEEEEEEecCCCcHHHHHHhhccc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEc
Confidence 349999999999999999864332 24699999999999999999999999999999999999998
Q ss_pred ccccc------------CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchh
Q 001143 963 LERKK------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1030 (1141)
Q Consensus 963 ~~~~~------------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1030 (1141)
.++.. ......+||+|||.+...... ....||+.|+|||++.+ ...++.++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~--------------~~~~gt~~y~aPE~~~~---~~~~~~~~ 212 (289)
T 1x8b_A 150 RTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP--------------QVEEGDSRFLANEVLQE---NYTHLPKA 212 (289)
T ss_dssp --------------------CCCEEECCCTTCEETTCS--------------CCCCCCGGGCCHHHHTT---CCTTHHHH
T ss_pred CCCCCcccccccccccccCCceEEEEcccccccccCCc--------------cccCCCccccChhHhcC---CCCCCchh
Confidence 54200 012257999999998765431 12358999999999976 23566899
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001143 1031 DIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1110 (1141)
Q Consensus 1031 DVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~ 1110 (1141)
|||||||++|+|++|.+|+.... ....+..+..+.++. ..++.+.+++.+
T Consensus 213 Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~ 262 (289)
T 1x8b_A 213 DIFALALTVVCAAGAEPLPRNGD---QWHEIRQGRLPRIPQ---------------------------VLSQEFTELLKV 262 (289)
T ss_dssp HHHHHHHHHHHHTTCCCCCSSSH---HHHHHHTTCCCCCSS---------------------------CCCHHHHHHHHH
T ss_pred hHHHHHHHHHHHhcCCCCCcchh---HHHHHHcCCCCCCCc---------------------------ccCHHHHHHHHH
Confidence 99999999999999988765432 233343333322211 445679999999
Q ss_pred hcccCCCCCCCHHHHHHHHHhhcCC
Q 001143 1111 CTEENPTERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1111 cL~~DP~~RPSa~ElL~~L~~~~~s 1135 (1141)
||+.||.+|||+.|+++|+|+...+
T Consensus 263 ~l~~dp~~Rps~~~ll~h~~~~~~~ 287 (289)
T 1x8b_A 263 MIHPDPERRPSAMALVKHSVLLSAS 287 (289)
T ss_dssp HTCSSGGGSCCHHHHHTCTTC----
T ss_pred HhCCCcccCCCHHHHhhChHhhhhc
Confidence 9999999999999999999998654
No 108
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=5.5e-38 Score=350.99 Aligned_cols=260 Identities=21% Similarity=0.280 Sum_probs=210.6
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+....+|.+.+.||+|+||.||+|.+. +..+|+|+...... ......+. +.+|+.++++++||||+++++++.
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~ 85 (294)
T 2rku_A 11 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREK----MSMEISIHRSLAHQHVVGFHGFFE 85 (294)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHHH----HHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred CCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhc-cCHHHHHH----HHHHHHHHHhCCCCCEeeeeeeec
Confidence 455678999999999999999999985 55678887653321 12223333 478999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.+ ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 86 ~~~--------------~~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Ni 146 (294)
T 2rku_A 86 DND--------------FVFVVLELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 146 (294)
T ss_dssp CSS--------------EEEEEEECCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred cCC--------------EEEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhE
Confidence 654 34999999999999999876 23699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.+||+|||.+........ ......||+.|+|||++.+ ..++.++||||||+++
T Consensus 147 l~~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~l 205 (294)
T 2rku_A 147 FLNED-------LEVKIGDFGLATKVEYDGE----------RKKVLCGTPNYIAPEVLSK----KGHSFEVDVWSIGCIM 205 (294)
T ss_dssp EECTT-------CCEEECCCTTCEECCSTTC----------CBCCCCSCCSSCCHHHHTT----SCBCTHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEEeccCceecccCcc----------ccccccCCCCcCCcchhcc----CCCCchhhHHHHHHHH
Confidence 99887 7899999999976542211 1123468999999999876 4578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|+.||......+....+...... ++ ...+..+.+++.+||+.||++|
T Consensus 206 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~~p~~R 257 (294)
T 2rku_A 206 YTLLVGKPPFETSCLKETYLRIKKNEYS-IP---------------------------KHINPVAASLIQKMLQTDPTAR 257 (294)
T ss_dssp HHHHHSSCTTCCSSHHHHHHHHHTTCCC-CC---------------------------TTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHhCCCCCCCCCHHHHHHHHhhccCC-Cc---------------------------cccCHHHHHHHHHHcccChhhC
Confidence 9999999999887766665555433211 10 0345568999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
||+.|+++|+|+...
T Consensus 258 ps~~~ll~~~~~~~~ 272 (294)
T 2rku_A 258 PTINELLNDEFFTSG 272 (294)
T ss_dssp CCGGGGGGSHHHHTS
T ss_pred cCHHHHhhChheecC
Confidence 999999999999754
No 109
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.7e-39 Score=354.66 Aligned_cols=261 Identities=22% Similarity=0.326 Sum_probs=185.2
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.+++|++.+.||+|+||.||+|++ .+..+|+|+..... ........++.+|+.++++++||||+++++++.+.
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-----~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 83 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKA-----MYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDS 83 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECS
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhh-----hhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccC
Confidence 467899999999999999999997 46678888864321 11112223458999999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+||++
T Consensus 84 ~--------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili 145 (278)
T 3cok_A 84 N--------------YVYLVLEMCHNGEMNRYLKN----RVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL 145 (278)
T ss_dssp S--------------EEEEEEECCTTEEHHHHHHT----CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE
T ss_pred C--------------eEEEEEecCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE
Confidence 4 34999999999999999875 23469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||+++|+
T Consensus 146 ~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 204 (278)
T 3cok_A 146 TRN-------MNIKIADFGLATQLKMPHE----------KHYTLCGTPNYISPEIATR----SAHGLESDVWSLGCMFYT 204 (278)
T ss_dssp CTT-------CCEEECCCTTCEECC------------------------------------------CTHHHHHHHHHHH
T ss_pred cCC-------CCEEEEeecceeeccCCCC----------cceeccCCCCcCCcchhcC----CCCCchhhHHHHHHHHHH
Confidence 887 7899999999976543211 1113468999999999876 567889999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|++|+.||......+....+..... .. ....+.++.+++.+||+.||.+|||
T Consensus 205 l~~g~~p~~~~~~~~~~~~~~~~~~-------------------------~~---~~~~~~~~~~li~~~l~~dp~~Rps 256 (278)
T 3cok_A 205 LLIGRPPFDTDTVKNTLNKVVLADY-------------------------EM---PSFLSIEAKDLIHQLLRRNPADRLS 256 (278)
T ss_dssp HHHSSCSSCCCSCC-----CCSSCC-------------------------CC---CTTSCHHHHHHHHHHSCSSGGGSCC
T ss_pred HHhCCCCCCChhHHHHHHHHhhccc-------------------------CC---ccccCHHHHHHHHHHcccCHhhCCC
Confidence 9999999976543322222111000 00 0134567999999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001143 1122 AGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1122 a~ElL~~L~~~~~s~ 1136 (1141)
+.++++|+|+.....
T Consensus 257 ~~~~l~h~~~~~~~~ 271 (278)
T 3cok_A 257 LSSVLDHPFMSRNSS 271 (278)
T ss_dssp HHHHTTSTTTC----
T ss_pred HHHHhcCccccCCCC
Confidence 999999999986544
No 110
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.7e-38 Score=367.22 Aligned_cols=295 Identities=18% Similarity=0.186 Sum_probs=208.1
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.++||+|+||+||+|.+ .+..||+|+...... .. .+|+.+++.++||||+++++++....
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~--------~~----~~E~~il~~l~hpnIv~l~~~~~~~~ 73 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR--------YK----NRELDIMKVLDHVNIIKLVDYFYTTG 73 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT--------SC----CHHHHHHTTCCCTTBCCEEEEEEEC-
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc--------hH----HHHHHHHHHcCCCCccchhheeeecC
Confidence 45799999999999999999998 456788886542211 11 47999999999999999999986532
Q ss_pred CCCC-----------CCC-------------CCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHH
Q 001143 883 WLPS-----------ADG-------------NPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVA 938 (1141)
Q Consensus 883 ~~~~-----------~~g-------------~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa 938 (1141)
.... ..+ .......+.++||||++ ++|.+.+...... ...+++..++.|+.||+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 74 DEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRS-GRSIPMNLISIYIYQLF 151 (383)
T ss_dssp ------------------------------------CCEEEEEECCCS-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhc-CCCCCHHHHHHHHHHHH
Confidence 1000 000 00012335789999998 6998888764433 35799999999999999
Q ss_pred HHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhc
Q 001143 939 AALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR 1018 (1141)
Q Consensus 939 ~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 1018 (1141)
.||.|||++||+||||||+|||++.+. +.+||+|||+|+.+.... ......||+.|+|||++.
T Consensus 152 ~aL~~LH~~gi~H~Dikp~Nil~~~~~------~~~kl~Dfg~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~ 214 (383)
T 3eb0_A 152 RAVGFIHSLGICHRDIKPQNLLVNSKD------NTLKLCDFGSAKKLIPSE-----------PSVAYICSRFYRAPELML 214 (383)
T ss_dssp HHHHHHHTTTEECSCCCGGGEEEETTT------TEEEECCCTTCEECCTTS-----------CCCCCCCCSSCCCHHHHT
T ss_pred HHHHHHHHCcCccCccCHHHEEEcCCC------CcEEEEECCCCcccCCCC-----------CCcCcccCCCccCHHHhc
Confidence 999999999999999999999998421 789999999997654321 112346899999999987
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhh
Q 001143 1019 AMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1097 (1141)
Q Consensus 1019 ~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1141)
+ ...++.++|||||||++|+|++|+.||.+.+..+....+ .....+................+.......-.....
T Consensus 215 ~---~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (383)
T 3eb0_A 215 G---ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILP 291 (383)
T ss_dssp T---CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSC
T ss_pred C---CCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCC
Confidence 6 235789999999999999999999999988777765555 333333322211111000000000000000000011
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1098 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1098 ~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
...+.++.+|+.+||+.||.+|||+.|+++|+||..
T Consensus 292 ~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~ 327 (383)
T 3eb0_A 292 EGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDH 327 (383)
T ss_dssp TTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHH
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHH
Confidence 245678999999999999999999999999999963
No 111
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=9.2e-38 Score=362.51 Aligned_cols=285 Identities=17% Similarity=0.209 Sum_probs=204.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||.||+|.+. +..||+|+.... .......+. +.+|+.+++.++||||+++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~E~~~l~~l~hpniv~~~~~~~~~~ 97 (371)
T 2xrw_A 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP--FQNQTHAKR----AYRELVLMKCVNHKNIIGLLNVFTPQK 97 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECT--TSSHHHHHH----HHHHHHHHHHCCCTTBCCEEEEECSCC
T ss_pred hhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccc--cCChHHHHH----HHHHHHHHHhcCCCCccceEEeecccc
Confidence 578999999999999999999984 566777775422 223333333 379999999999999999999987644
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ......++||||++ ++|.+++.. .+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 98 ~~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~ 161 (371)
T 2xrw_A 98 SL--------EEFQDVYIVMELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK 161 (371)
T ss_dssp ST--------TTCCEEEEEEECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred cc--------ccccceEEEEEcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEc
Confidence 21 12336799999997 688888753 589999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 162 ~~-------~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~el 219 (371)
T 2xrw_A 162 SD-------CTLKILDFGLARTAGTSF-----------MMTPYVVTRYYRAPEVILG----MGYKENVDIWSVGCIMGEM 219 (371)
T ss_dssp TT-------SCEEECCCCC---------------------------CTTCCHHHHTT----CCCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEEEeeccccccccc-----------ccCCceecCCccCHHHhcC----CCCCchHhHHHHHHHHHHH
Confidence 87 789999999997643211 1123468999999999986 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccC-----------ccccccccCCC---CCCchhhhhhHHHHHHHH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSC-----------HEHEVAQSGSG---FEKPEAELETLSFLVDVF 1108 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~-----------~~~~~~~~~~~---~~~~~~~~~~~~~L~dLI 1108 (1141)
++|+.||.+.+..+....+........+......... ....+...... ..........+..+.+||
T Consensus 220 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 299 (371)
T 2xrw_A 220 IKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLL 299 (371)
T ss_dssp HHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHH
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHH
Confidence 9999999988877766666443333322221111000 00000000000 000111223477899999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1109 RRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1109 ~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.+||+.||.+|||++|+++|+|+..
T Consensus 300 ~~mL~~dP~~R~t~~e~l~hp~~~~ 324 (371)
T 2xrw_A 300 SKMLVIDASKRISVDEALQHPYINV 324 (371)
T ss_dssp HHHSCSSGGGSCCHHHHHHSHHHHT
T ss_pred HHHCcCChhhCCCHHHHhCCcchhh
Confidence 9999999999999999999999964
No 112
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.5e-38 Score=364.66 Aligned_cols=261 Identities=25% Similarity=0.382 Sum_probs=210.9
Q ss_pred CCCceEeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 874 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~---------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 874 (1141)
.++|.+.++||+|+||.||+|++.+ ..+|+|+.+.. ......+. +.+|+++++++ +||||+++
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~hpnIv~~ 140 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD---ATEKDLSD----LISEMEMMKMIGKHKNIINL 140 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCE
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc---cCHHHHHH----HHHHHHHHHHhcCCchhhhh
Confidence 4579999999999999999999732 35777775422 22333333 37999999999 89999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 943 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----------~~~~Ls~~~i~~Ia~QIa~gL~y 943 (1141)
++++.+.+.. ++||||+++++|.+++...... ....+++..++.|+.||+.||.|
T Consensus 141 ~~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 206 (382)
T 3tt0_A 141 LGACTQDGPL--------------YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEY 206 (382)
T ss_dssp EEEECSSSSC--------------EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred eeeeccCCce--------------EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHH
Confidence 9999876544 9999999999999999873211 12459999999999999999999
Q ss_pred HHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001143 944 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1023 (1141)
Q Consensus 944 LHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1023 (1141)
||++||+||||||+|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+
T Consensus 207 LH~~~ivH~Dlkp~NIll~~~-------~~~kL~DFG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~---- 267 (382)
T 3tt0_A 207 LASKKCIHRDLAARNVLVTED-------NVMKIADFGLARDIHHIDYY--------KKTTNGRLPVKWMAPEALFD---- 267 (382)
T ss_dssp HHHTTCCCSCCCGGGEEECTT-------CCEEECSCSCCCCSSCCCTT--------CCCTTCCCGGGGSCHHHHHS----
T ss_pred HHhCCEecCCCCcceEEEcCC-------CcEEEcccCccccccccccc--------ccccCCCCCcceeCHHHhcC----
Confidence 999999999999999999887 78999999999765432211 11223457889999999986
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHH
Q 001143 1024 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1102 (1141)
Q Consensus 1024 ~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1141)
..++.++|||||||++|+|++ |..||.+....++...+..+..+..+. .+++
T Consensus 268 ~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 320 (382)
T 3tt0_A 268 RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS---------------------------NCTN 320 (382)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCS---------------------------SCCH
T ss_pred CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCH
Confidence 568899999999999999999 999999888877777776554433221 4456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1103 FLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1103 ~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
++.+|+.+||+.||.+|||+.|+++++...
T Consensus 321 ~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 321 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 799999999999999999999999998765
No 113
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1e-38 Score=377.04 Aligned_cols=269 Identities=20% Similarity=0.276 Sum_probs=200.1
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|.+.+.||+|+||.||+|.+. +..+|+|+...+...............+.+|+.++++++||||+++++++...
T Consensus 134 ~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~- 212 (419)
T 3i6u_A 134 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE- 212 (419)
T ss_dssp HTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS-
T ss_pred hccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC-
Confidence 357999999999999999999984 56788888765432222211112222357999999999999999999998542
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 213 --------------~~~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~ 273 (419)
T 3i6u_A 213 --------------DYYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 273 (419)
T ss_dssp --------------EEEEEEECCTTCBGGGGTSS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEES
T ss_pred --------------ceEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEe
Confidence 24899999999999888754 34799999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.++ ....+||+|||+++...... ......||+.|+|||++.+.. ...++.++|||||||++|+|
T Consensus 274 ~~~----~~~~~kl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~~l 337 (419)
T 3i6u_A 274 SQE----EDCLIKITDFGHSKILGETS-----------LMRTLCGTPTYLAPEVLVSVG-TAGYNRAVDCWSLGVILFIC 337 (419)
T ss_dssp SSS----SSCCEEECCSSTTTSCC----------------------CTTCCTTTTC-----CTTHHHHHHHHHHHHHHHH
T ss_pred cCC----CcceEEEeecccceecCCCc-----------cccccCCCCCccCceeeecCC-CCCCCchhhhHhHHHHHHHH
Confidence 542 12569999999997654321 112456999999999985321 24678899999999999999
Q ss_pred HhCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++|+.||...... .+...+..+.....+... ...++.+.+|+.+||+.||.+|||
T Consensus 338 ltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~------------------------~~~~~~~~~li~~~L~~dP~~Rps 393 (419)
T 3i6u_A 338 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVW------------------------AEVSEKALDLVKKLLVVDPKARFT 393 (419)
T ss_dssp HHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHH------------------------TTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred HHCCCCCCCCcchHHHHHHHhcCCCCCCchhh------------------------cccCHHHHHHHHHHccCChhHCcC
Confidence 9999999764322 234444444433222211 145677999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001143 1122 AGDLYEMFVART 1133 (1141)
Q Consensus 1122 a~ElL~~L~~~~ 1133 (1141)
+.|+++|+|+..
T Consensus 394 ~~e~l~hp~~~~ 405 (419)
T 3i6u_A 394 TEEALRHPWLQD 405 (419)
T ss_dssp HHHHHHSGGGCC
T ss_pred HHHHhCCcccCC
Confidence 999999999964
No 114
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=372.90 Aligned_cols=267 Identities=24% Similarity=0.265 Sum_probs=210.3
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
..++|++.++||+|+||.||+|++. +..+|+|+..... .........+.+|..++.+++||||+++++++.+.
T Consensus 59 ~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~-----~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 133 (412)
T 2vd5_A 59 QRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD-----MLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDE 133 (412)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHH-----HHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred ChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH-----hhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeC
Confidence 3568999999999999999999984 6678888754211 11111223457899999999999999999999875
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. +.|+||||++||+|.+++.+. ...+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus 134 ~--------------~~~lVmE~~~gg~L~~~l~~~----~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl 195 (412)
T 2vd5_A 134 N--------------YLYLVMEYYVGGDLLTLLSKF----GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195 (412)
T ss_dssp S--------------EEEEEECCCCSCBHHHHHHHH----SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred C--------------EEEEEEcCCCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee
Confidence 5 359999999999999999762 2369999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc---CCCCCCchhhHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~~s~ksDVWSLGvi 1038 (1141)
+.+ +++||+|||+|+........ .....+||+.|+|||++.... ....++.++|||||||+
T Consensus 196 d~~-------g~vkL~DFGla~~~~~~~~~---------~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvi 259 (412)
T 2vd5_A 196 DRC-------GHIRLADFGSCLKLRADGTV---------RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVF 259 (412)
T ss_dssp CTT-------SCEEECCCTTCEECCTTSCE---------ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHH
T ss_pred cCC-------CCEEEeechhheeccCCCcc---------ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHH
Confidence 987 88999999999765432111 112357999999999987321 12457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|||++|+.||.+.+..+....+.... ...+ +......+.++++||.+||. +|.
T Consensus 260 lyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~------------------------p~~~~~~s~~~~dli~~lL~-~p~ 314 (412)
T 2vd5_A 260 AYEMFYGQTPFYADSTAETYGKIVHYKEHLSL------------------------PLVDEGVPEEARDFIQRLLC-PPE 314 (412)
T ss_dssp HHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCC------------------------C----CCCHHHHHHHHTTSS-CGG
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhcccCcCC------------------------CccccCCCHHHHHHHHHHcC-Chh
Confidence 999999999999888877776664311 0000 00111456779999999999 999
Q ss_pred CC---CCHHHHHHHHHhhcC
Q 001143 1118 ER---PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1118 ~R---PSa~ElL~~L~~~~~ 1134 (1141)
+| |+++|+++|+||..-
T Consensus 315 ~Rlgr~~~~ei~~Hpff~~i 334 (412)
T 2vd5_A 315 TRLGRGGAGDFRTHPFFFGL 334 (412)
T ss_dssp GCTTTTTHHHHHTSGGGTTC
T ss_pred hcCCCCCHHHHhcCCCcCCC
Confidence 98 699999999999754
No 115
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2.3e-38 Score=368.61 Aligned_cols=257 Identities=25% Similarity=0.387 Sum_probs=207.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||+|+||.||+|++. +..||+|+.+ .. ......+.+ .+|+.++++++||||+++++++....
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~--~~-~~~~~~~~~----~~E~~~l~~l~hpniv~~~~~~~~~~ 185 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR--ET-LPPDLKAKF----LQEARILKQYSHPNIVRLIGVCTQKQ 185 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECC--TT-SCHHHHTTT----THHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcc--cc-CCHHHHHHH----HHHHHHHHhCCCCCEEEEEEEEecCC
Confidence 457999999999999999999995 5667777643 21 222333344 79999999999999999999997655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ++||||+++|+|.++++.. ...+++..+..++.||+.||+|||++||+||||||+|||++
T Consensus 186 ~~--------------~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~ 247 (377)
T 3cbl_A 186 PI--------------YIVMELVQGGDFLTFLRTE----GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT 247 (377)
T ss_dssp SC--------------EEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred Cc--------------EEEEEcCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc
Confidence 43 9999999999999999762 23589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++......... ......+++.|+|||++.+ ..++.++|||||||++|||
T Consensus 248 ~~-------~~~kl~DfG~s~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~il~el 308 (377)
T 3cbl_A 248 EK-------NVLKISDFGMSREEADGVYAA--------SGGLRQVPVKWTAPEALNY----GRYSSESDVWSFGILLWET 308 (377)
T ss_dssp TT-------CCEEECCGGGCEECTTSEEEC--------CSSCCEEEGGGSCHHHHHH----CEEEHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEECcCCCceecCCCceee--------cCCCCCCCcCcCCHhHhcc----CCCCchhhHHHHHHHHHHH
Confidence 87 789999999997543321110 1112235778999999986 4678999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |..||.+....+....+..+.....+. .+++.+.+++.+||+.||.+|||
T Consensus 309 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~Rps 361 (377)
T 3cbl_A 309 FSLGASPYPNLSNQQTREFVEKGGRLPCPE---------------------------LCPDAVFRLMEQCWAYEPGQRPS 361 (377)
T ss_dssp HTTSCCSSTTSCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCchhCcC
Confidence 98 999999888777777666554433221 34567999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001143 1122 AGDLYEMFVAR 1132 (1141)
Q Consensus 1122 a~ElL~~L~~~ 1132 (1141)
+.++++.+...
T Consensus 362 ~~~i~~~L~~i 372 (377)
T 3cbl_A 362 FSTIYQELQSI 372 (377)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988654
No 116
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=7.1e-38 Score=360.91 Aligned_cols=257 Identities=27% Similarity=0.416 Sum_probs=206.3
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCCh-HHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSA-DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~-~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..|++.+.||+|+||+||+|++ .+..||+|+.... .... ...+ .+.+|+.++++++||||+++++++....
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~--~~~~~~~~~----~~~~E~~~l~~l~hpniv~~~~~~~~~~ 127 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS--GKQSNEKWQ----DIIKEVRFLQKLRHPNTIQYRGCYLREH 127 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESC--SSCHHHHHH----HHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccc--cccchHHHH----HHHHHHHHHHhCCCCCEeeEEEEEEECC
Confidence 3489999999999999999997 4566777765432 2122 2223 3489999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||++ |+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 128 --------------~~~lv~e~~~-g~l~~~l~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~ 188 (348)
T 1u5q_A 128 --------------TAWLVMEYCL-GSASDLLEVH----KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS 188 (348)
T ss_dssp --------------EEEEEEECCS-EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE
T ss_pred --------------eEEEEEecCC-CCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC
Confidence 3499999997 7888888642 34699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++...... ....||+.|+|||++.+.. ...++.++|||||||++|||
T Consensus 189 ~~-------~~~kL~DfG~a~~~~~~--------------~~~~gt~~y~aPE~~~~~~-~~~~~~~~DiwslG~il~el 246 (348)
T 1u5q_A 189 EP-------GLVKLGDFGSASIMAPA--------------NSFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIEL 246 (348)
T ss_dssp TT-------TEEEECCCTTCBSSSSB--------------CCCCSCGGGCCHHHHHTTS-SCCBCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeccCceecCCC--------------CcccCCcceeCHhhhcccc-CCCCCcHHHHHHHHHHHHHH
Confidence 87 88999999999654321 1346899999999986321 24678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||.+.+..+....+.....+.... ...++.+.+||.+||+.||.+|||+
T Consensus 247 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dP~~Rps~ 300 (348)
T 1u5q_A 247 AERKPPLFNMNAMSALYHIAQNESPALQS--------------------------GHWSEYFRNFVDSCLQKIPQDRPTS 300 (348)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHSCCCCCCC--------------------------TTSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HhCCCCCCCCChHHHHHHHHhcCCCCCCC--------------------------CCCCHHHHHHHHHHcccChhhCcCH
Confidence 99999998877766655554443322110 1345678999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 001143 1123 GDLYEMFVARTSS 1135 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s 1135 (1141)
.++++|+|+....
T Consensus 301 ~~ll~h~~~~~~~ 313 (348)
T 1u5q_A 301 EVLLKHRFVLRER 313 (348)
T ss_dssp HHHTTCHHHHSCC
T ss_pred HHHhhChhhhccC
Confidence 9999999997643
No 117
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=4e-38 Score=352.32 Aligned_cols=275 Identities=23% Similarity=0.328 Sum_probs=198.5
Q ss_pred CCCceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
..+|++.++||+|+||+||+|++ .+..+|+|+... ......+.+ .+|+.++++++||||+++++++
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~----~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~ 80 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH----STEEHLRDF----EREIEILKSLQHDNIVKYKGVC 80 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC----CCHHHHHHH----HHHHHHHHTCCCTTBCCEEEEE
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc----CCHHHHHHH----HHHHHHHHhCCCCCEeeEEEEE
Confidence 45799999999999999999985 456677776532 223333444 8999999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
...+. ...++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 81 ~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~N 144 (295)
T 3ugc_A 81 YSAGR------------RNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 144 (295)
T ss_dssp CHHHH------------TSCEEEEECCTTCBHHHHHHHC----GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGG
T ss_pred ecCCC------------CceEEEEEeCCCCCHHHHHHhc----ccccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhh
Confidence 65321 1349999999999999999762 2359999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||++.......... .......++..|+|||++.+ ..++.++||||||++
T Consensus 145 il~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~~ 206 (295)
T 3ugc_A 145 ILVENE-------NRVKIGDFGLTKVLPQDKEFF-------KVKEPGESPIFWYAPESLTE----SKFSVASDVWSFGVV 206 (295)
T ss_dssp EEEEET-------TEEEECCCCSCC--------------------CTTCGGGGCCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CeEEEccCcccccccCCccee-------eeccCCCCccceeCcHHhcC----CCCChHHHHHHHHHH
Confidence 999987 789999999997654322110 11123347788999999987 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|+|++|..||... ..+....+.......... .... . .......... ...+++++.+++.+||+.||.+
T Consensus 207 l~~l~~g~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~-----~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~ 275 (295)
T 3ugc_A 207 LYELFTYIEKSKSP-PAEFMRMIGNDKQGQMIV-FHLI-----E-LLKNNGRLPR---PDGCPDEIYMIMTECWNNNVNQ 275 (295)
T ss_dssp HHHHHHTTCTTCSH-HHHHHHHHCTTCCTHHHH-HHHH-----H-HHHTTCCCCC---CTTCCHHHHHHHHHHSCSSGGG
T ss_pred HHHHHhcccccCCC-hHHHHhhhcCccccchhH-HHHH-----H-HHhccCcCCC---CcCcCHHHHHHHHHHcCCChhh
Confidence 99999999998642 222222221111100000 0000 0 0000000001 1256778999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001143 1119 RPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~ 1132 (1141)
|||+.|+++.+...
T Consensus 276 Rps~~el~~~L~~l 289 (295)
T 3ugc_A 276 RPSFRDLALRVDQI 289 (295)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999999988654
No 118
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.8e-38 Score=376.98 Aligned_cols=267 Identities=23% Similarity=0.280 Sum_probs=210.1
Q ss_pred CCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.++||+|+||+||+|++.. ..+|+|+..... .........+.+|+.++..++||||+++++++.+..
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 147 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE-----MLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN 147 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHH-----HHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHH-----hhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC
Confidence 4679999999999999999999854 567777754211 111111123478999999999999999999998765
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..|+||||++||+|.+++.+. ...+++..++.|+.||+.||.|||++||+||||||+|||++
T Consensus 148 --------------~~~lV~Ey~~gg~L~~~l~~~----~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~ 209 (437)
T 4aw2_A 148 --------------NLYLVMDYYVGGDLLTLLSKF----EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209 (437)
T ss_dssp --------------EEEEEECCCTTCBHHHHHHTT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------EEEEEEecCCCCcHHHHHHHc----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc
Confidence 359999999999999999751 34699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~E 1041 (1141)
.+ +.+||+|||+|+........ .....+||+.|+|||++.... ....++.++|||||||++||
T Consensus 210 ~~-------g~vkL~DFGla~~~~~~~~~---------~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~e 273 (437)
T 4aw2_A 210 MN-------GHIRLADFGSCLKLMEDGTV---------QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273 (437)
T ss_dssp TT-------SCEEECCCTTCEECCTTSCE---------ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEcchhhhhhcccCCCc---------ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHH
Confidence 87 88999999999765432211 112357999999999987321 12457899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCC-CCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC--
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGK-RPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE-- 1118 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~-- 1118 (1141)
|++|+.||.+.+..+....+.... ...++ ......++++.+||.+||..+|++
T Consensus 274 lltG~~Pf~~~~~~~~~~~i~~~~~~~~~p------------------------~~~~~~s~~~~dLi~~lL~~~~~r~~ 329 (437)
T 4aw2_A 274 MLYGETPFYAESLVETYGKIMNHKERFQFP------------------------TQVTDVSENAKDLIRRLICSREHRLG 329 (437)
T ss_dssp HHHSSCTTCCSSHHHHHHHHHTHHHHCCCC------------------------SSCCCSCHHHHHHHHTTSSCGGGCTT
T ss_pred HHhCCCCCCCCChhHHHHhhhhccccccCC------------------------cccccCCHHHHHHHHHHhcccccccC
Confidence 999999999888877776664211 00000 000135677999999999988888
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
||+++|+++|+||..-
T Consensus 330 r~~~~eil~Hpff~~i 345 (437)
T 4aw2_A 330 QNGIEDFKKHPFFSGI 345 (437)
T ss_dssp TTTTHHHHTSGGGTTC
T ss_pred CCCHHHHhCCCccCCC
Confidence 9999999999999753
No 119
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=8.4e-38 Score=351.80 Aligned_cols=261 Identities=21% Similarity=0.355 Sum_probs=207.9
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
..+|.+.+.||+|+||.||+|.+. +..+|+|+.. .. ......+.+ .+|+.++++++||||++++++
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~~----~~E~~~l~~l~hp~iv~~~~~ 94 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLK--EN-ASPSELRDL----LSEFNVLKQVNHPHVIKLYGA 94 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECC--TT-CCHHHHHHH----HHHHHHHTTCCCTTBCCEEEE
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEecc--CC-CCHHHHHHH----HHHHHHHhhCCCCceeeEEEE
Confidence 467999999999999999999872 2456777643 21 223333344 899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-------------------CCCCCCHHHHHHHHHHHH
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-------------------GEKHVSVKLALFIAQDVA 938 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-------------------~~~~Ls~~~i~~Ia~QIa 938 (1141)
+.+.... ++||||+++++|.+++...... ....+++..++.++.||+
T Consensus 95 ~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~ 160 (314)
T 2ivs_A 95 CSQDGPL--------------LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQIS 160 (314)
T ss_dssp ECSSSSC--------------EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHH
T ss_pred EecCCce--------------EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHH
Confidence 9865543 9999999999999999863221 123589999999999999
Q ss_pred HHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhc
Q 001143 939 AALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLR 1018 (1141)
Q Consensus 939 ~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 1018 (1141)
.||.|||++||+||||||+||+++.+ +.+||+|||++.......... ......+|+.|+|||++.
T Consensus 161 ~~l~~lH~~~ivH~dikp~NIli~~~-------~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~ 225 (314)
T 2ivs_A 161 QGMQYLAEMKLVHRDLAARNILVAEG-------RKMKISDFGLSRDVYEEDSYV--------KRSQGRIPVKWMAIESLF 225 (314)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEEETT-------TEEEECCCTTCEECTTTSCEE--------CSSCCCSCGGGCCHHHHH
T ss_pred HHHHHHHHCCCcccccchheEEEcCC-------CCEEEccccccccccccccce--------eccCCCCcccccChhhhc
Confidence 99999999999999999999999987 789999999997654322110 112335788999999998
Q ss_pred cccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhh
Q 001143 1019 AMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1097 (1141)
Q Consensus 1019 ~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1141)
+ ..++.++|||||||++|+|++ |..||.+....++...+..+..+..+
T Consensus 226 ~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------- 274 (314)
T 2ivs_A 226 D----HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHRMERP--------------------------- 274 (314)
T ss_dssp H----CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCC---------------------------
T ss_pred C----CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCcCCCC---------------------------
Confidence 6 567899999999999999999 99999887776666666554432221
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1098 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1098 ~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
...++.+.+++.+||+.||.+|||+.++++++...
T Consensus 275 ~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~ 309 (314)
T 2ivs_A 275 DNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKM 309 (314)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 14556799999999999999999999999998764
No 120
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=5.3e-38 Score=351.24 Aligned_cols=265 Identities=24% Similarity=0.363 Sum_probs=199.3
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhh--CCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~--L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||+||+|++.+..||+|++... ....+ .+|.+++.. ++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-------~~~~~----~~e~~~~~~~~l~h~niv~~~~~~~~~~ 75 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR-------DEKSW----FRETELYNTVMLRHENILGFIASDMTSR 75 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG-------GHHHH----HHHHHHHHHTCCCCTTBCCEEEEEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc-------cchhh----HHHHHHHHHhhccCcCeeeEEEeecccc
Confidence 457999999999999999999999999999986422 11222 456666655 78999999999976532
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCccccCC
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDI 954 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLH--------s~gIvHrDL 954 (1141)
. .....++||||+++|+|.++++. ..+++..++.|+.||+.||+||| ++||+||||
T Consensus 76 ~----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dl 139 (301)
T 3q4u_A 76 H----------SSTQLWLITHYHEMGSLYDYLQL------TTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDL 139 (301)
T ss_dssp T----------TEEEEEEEECCCTTCBHHHHHTT------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCC
T ss_pred C----------CCceeEEehhhccCCCHHHHHhh------cccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCC
Confidence 1 12356999999999999999954 36999999999999999999999 999999999
Q ss_pred CCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC--CCCchhhH
Q 001143 955 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDI 1032 (1141)
Q Consensus 955 KP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksDV 1032 (1141)
||+|||++.+ +.+||+|||+++.......... .......||+.|+|||++.+..... .++.++||
T Consensus 140 kp~Nill~~~-------~~~kl~Dfg~a~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dv 206 (301)
T 3q4u_A 140 KSKNILVKKN-------GQCCIADLGLAVMHSQSTNQLD------VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDI 206 (301)
T ss_dssp CGGGEEECTT-------SCEEECCCTTCEEEETTTTEEE------CCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHH
T ss_pred ChHhEEEcCC-------CCEEEeeCCCeeeccccccccc------ccccccccccceeChhhhcCcCCCCcccCCchhhH
Confidence 9999999987 7899999999976543222110 0112346999999999997632111 34579999
Q ss_pred HHHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHH-hCCCCCchhHHhhhccCccccccccCCCCCCchh
Q 001143 1033 WSYGCLLLELLTL----------QVPYMGLS-----ELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEA 1096 (1141)
Q Consensus 1033 WSLGviL~ELLTG----------k~Pf~~~~-----~~el~~~I~-~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1096 (1141)
|||||++|||++| +.||.... .......+. ....+.++.. ..
T Consensus 207 wslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 264 (301)
T 3q4u_A 207 WAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNR----------------------WF 264 (301)
T ss_dssp HHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG----------------------GG
T ss_pred HHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChh----------------------hc
Confidence 9999999999999 88885421 122222221 1122221110 11
Q ss_pred hhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Q 001143 1097 ELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1097 ~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
....+..+.+++.+||+.||.+|||+.|+++.+..
T Consensus 265 ~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~ 299 (301)
T 3q4u_A 265 SDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTK 299 (301)
T ss_dssp GSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhc
Confidence 12567889999999999999999999999998865
No 121
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5.8e-38 Score=352.00 Aligned_cols=266 Identities=22% Similarity=0.281 Sum_probs=206.8
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+.+|++.+.||+|+||.||+|.+. +..+|+|+....... ........+.+|+.++++++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 79 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLR----RIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEE 79 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHH----HSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC-
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEecccccc----ccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCC
Confidence 468999999999999999999984 556788876533211 10112234589999999999999999999985422
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
....++||||++++ |.+++.. .....+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 80 ------------~~~~~lv~e~~~~~-l~~~~~~---~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~ 143 (305)
T 2wtk_C 80 ------------KQKMYMVMEYCVCG-MQEMLDS---VPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT 143 (305)
T ss_dssp --------------CEEEEEECCSEE-HHHHHHH---STTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred ------------CCeEEEEehhccCC-HHHHHHh---CcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc
Confidence 12459999999865 8888765 2345799999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||.+......... .......||+.|+|||++.+.. ..++.++||||||+++|+|
T Consensus 144 ~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~--~~~~~~~Di~slG~il~~l 206 (305)
T 2wtk_C 144 TG-------GTLKISALGVAEALHPFAAD--------DTCRTSQGSPAFQPPEIANGLD--TFSGFKVDIWSAGVTLYNI 206 (305)
T ss_dssp TT-------CCEEECCCTTCEECCTTCSS--------CEECCCCSCGGGCCHHHHTCCS--CEESHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEeeccccccccCccccc--------cccccCCCCCCCcChhhccCcc--cCCcchhhHHHHHHHHHHH
Confidence 87 78999999999765432111 0112345899999999987521 2346899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||.+....+....+..+.... + ...+..+.+++.+||..||.+|||+
T Consensus 207 ~~g~~p~~~~~~~~~~~~i~~~~~~~-~---------------------------~~~~~~l~~li~~~l~~dp~~Rps~ 258 (305)
T 2wtk_C 207 TTGLYPFEGDNIYKLFENIGKGSYAI-P---------------------------GDCGPPLSDLLKGMLEYEPAKRFSI 258 (305)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHCCCCC-C---------------------------SSSCHHHHHHHHHHTCSSTTTSCCH
T ss_pred HhCCCCCCCchHHHHHHHHhcCCCCC-C---------------------------CccCHHHHHHHHHHccCChhhCCCH
Confidence 99999999877777766665443211 0 0345678999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 001143 1123 GDLYEMFVARTSS 1135 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s 1135 (1141)
.|+++|+|+....
T Consensus 259 ~~ll~~~~~~~~~ 271 (305)
T 2wtk_C 259 RQIRQHSWFRKKH 271 (305)
T ss_dssp HHHHHSHHHHSCC
T ss_pred HHHhcCcccccCC
Confidence 9999999997653
No 122
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.9e-38 Score=342.95 Aligned_cols=257 Identities=21% Similarity=0.343 Sum_probs=208.7
Q ss_pred CCCCceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
...+|++.+.||+|+||.||+|.+ .+..+++|+..... .. .+. +.+|+.++++++||||+++++++.+.+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~--~~---~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~ 76 (267)
T 3t9t_A 6 DPSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MS---EED----FIEEAEVMMKLSHPKLVQLYGVCLEQA 76 (267)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTT--BC---HHH----HHHHHHHHHTCCCTTBCCEEEEECSSS
T ss_pred chhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccC--CC---HHH----HHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 346799999999999999999998 45578888764321 11 123 379999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 77 ~~--------------~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~ 138 (267)
T 3t9t_A 77 PI--------------CLVTEFMEHGCLSDYLRTQ----RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG 138 (267)
T ss_dssp SC--------------EEEECCCTTCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC
T ss_pred Ce--------------EEEEeCCCCCcHHHHHhhC----cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC
Confidence 43 9999999999999999762 24689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++......... ......+|+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 139 ~~-------~~~kl~dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 198 (267)
T 3t9t_A 139 EN-------QVIKVSDFGMTRFVLDDQYT---------SSTGTKFPVKWASPEVFSF----SRYSSKSDVWSFGVLMWEV 198 (267)
T ss_dssp GG-------GCEEECCTTGGGGBCCHHHH---------STTSTTCCGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEccccccccccccccc---------ccccccccccccChhhhcC----CCccchhchhhhHHHHHHH
Confidence 87 78999999999765432111 1123357889999999976 5678999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |+.||......+....+..+..+..+. ..+..+.+++.+||+.||.+|||
T Consensus 199 ~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rps 251 (267)
T 3t9t_A 199 FSEGKIPYENRSNSEVVEDISTGFRLYKPR---------------------------LASTHVYQIMNHCWRERPEDRPA 251 (267)
T ss_dssp HTTSCCTTTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hccCCCCCCCCCHHHHHHHHhcCCcCCCCc---------------------------cCcHHHHHHHHHHccCChhhCcC
Confidence 99 899999887777776665543322111 34567899999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
+.++++++.....
T Consensus 252 ~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 252 FSRLLRQLAEIAE 264 (267)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999876543
No 123
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.6e-38 Score=357.76 Aligned_cols=260 Identities=21% Similarity=0.280 Sum_probs=211.0
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+....+|.+.+.||+|+||.||+|.+. +..+++|+...... ......+. +.+|+.++++++||||+++++++.
T Consensus 37 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~ 111 (335)
T 2owb_A 37 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLL-LKPHQREK----MSMEISIHRSLAHQHVVGFHGFFE 111 (335)
T ss_dssp TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-CSHHHHHH----HHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred cccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhh-cCHHHHHH----HHHHHHHHHhCCCCCCCeEEEEEe
Confidence 455678999999999999999999985 45678887653321 12233333 478999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.+ ..++||||+++++|.+++.. ...+++.+++.++.||+.||.|||++||+||||||+||
T Consensus 112 ~~~--------------~~~lv~e~~~~~~L~~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NI 172 (335)
T 2owb_A 112 DND--------------FVFVVLELCRRRSLLELHKR-----RKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 172 (335)
T ss_dssp CSS--------------EEEEEECCCTTCBHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred cCC--------------eEEEEEecCCCCCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhE
Confidence 654 34999999999999999876 24699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||+++
T Consensus 173 l~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 231 (335)
T 2owb_A 173 FLNED-------LEVKIGDFGLATKVEYDGE----------RKKVLCGTPNYIAPEVLSK----KGHSFEVDVWSIGCIM 231 (335)
T ss_dssp EECTT-------CCEEECCCTTCEECCSTTC----------CBCCCCSCCSSCCHHHHHT----SCBCTHHHHHHHHHHH
T ss_pred EEcCC-------CCEEEeeccCceecccCcc----------cccccCCCccccCHHHhcc----CCCCchhhHHHHHHHH
Confidence 99887 7899999999976543211 1123468999999999976 5578999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|+.||......+....+...... ++ ...+..+.+||.+||+.||.+|
T Consensus 232 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~l~~dp~~R 283 (335)
T 2owb_A 232 YTLLVGKPPFETSCLKETYLRIKKNEYS-IP---------------------------KHINPVAASLIQKMLQTDPTAR 283 (335)
T ss_dssp HHHHHSSCTTCCSSHHHHHHHHHHTCCC-CC---------------------------TTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHHHHCcCCCCCCCHHHHHHHHhcCCCC-CC---------------------------ccCCHHHHHHHHHHccCChhHC
Confidence 9999999999887766665555433211 10 0344568999999999999999
Q ss_pred CCHHHHHHHHHhhcC
Q 001143 1120 PTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~ 1134 (1141)
||+.|+++|+|+...
T Consensus 284 ps~~ell~~~~~~~~ 298 (335)
T 2owb_A 284 PTINELLNDEFFTSG 298 (335)
T ss_dssp CCGGGGGGSHHHHTS
T ss_pred cCHHHHhcCccccCC
Confidence 999999999999754
No 124
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=4.6e-38 Score=361.41 Aligned_cols=263 Identities=23% Similarity=0.358 Sum_probs=204.0
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 875 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkll 875 (1141)
..++|++.+.||+|+||.||+|++. +..||+|+.... ......+. +.+|+.++.++ +||||++++
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~hpniv~~~ 92 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHRA----LMSELKILIHIGHHLNVVNLL 92 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCEE
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc---CCHHHHHH----HHHHHHHHHhhcCCcceeeee
Confidence 3567999999999999999999853 256777775321 22233333 48999999999 799999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcC----------------------------------
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETG---------------------------------- 921 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~---------------------------------- 921 (1141)
+++.+.+. ..++||||+++|+|.++++......
T Consensus 93 ~~~~~~~~-------------~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (359)
T 3vhe_A 93 GACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSS 159 (359)
T ss_dssp EEECSTTS-------------CCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------
T ss_pred eeeecCCC-------------ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcc
Confidence 99876432 2499999999999999998632100
Q ss_pred ---------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeE
Q 001143 922 ---------------------------EKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVV 974 (1141)
Q Consensus 922 ---------------------------~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~v 974 (1141)
...+++..++.|+.||+.||.|||++||+||||||+|||++.+ +.+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~-------~~~ 232 (359)
T 3vhe_A 160 QSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEK-------NVV 232 (359)
T ss_dssp ------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG-------GCE
T ss_pred ccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCC-------CcE
Confidence 1128999999999999999999999999999999999999987 789
Q ss_pred EEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCC
Q 001143 975 KLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLS 1053 (1141)
Q Consensus 975 KL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~ 1053 (1141)
||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|+|++ |..||.+..
T Consensus 233 kl~Dfg~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~il~ellt~g~~p~~~~~ 300 (359)
T 3vhe_A 233 KICDFGLARDIYKDPDY--------VRKGDARLPLKWMAPETIFD----RVYTIQSDVWSFGVLLWEIFSLGASPYPGVK 300 (359)
T ss_dssp EECCCGGGSCTTSCTTC--------EEC--CEECGGGCCHHHHHH----CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred EEEeccceeeecccccc--------hhccccCCCceeEChhhhcC----CCCCchhhhhhHHHHHHHHHhcCCCCCCccc
Confidence 99999999765332111 01223468899999999986 568899999999999999998 999998755
Q ss_pred HH-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1054 EL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1054 ~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.. .....+..+..+..+. ..++++.+++.+||+.||.+|||+.|+++|+...
T Consensus 301 ~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 353 (359)
T 3vhe_A 301 IDEEFCRRLKEGTRMRAPD---------------------------YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 353 (359)
T ss_dssp CSHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 33 3344444433322211 3456799999999999999999999999998764
No 125
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=4.9e-38 Score=362.18 Aligned_cols=279 Identities=23% Similarity=0.314 Sum_probs=206.4
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
....+|++.+.||+|+||.||+|.+. +..+|+|+..... .....+ .+.+|+.++++++||||+++++++..
T Consensus 30 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~---~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~ 102 (360)
T 3eqc_A 30 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI---KPAIRN----QIIRELQVLHECNSPYIVGFYGAFYS 102 (360)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCC---CHHHHH----HHHHHHGGGGGCCCTTBCCEEEEEEE
T ss_pred cccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEecccc---CHHHHH----HHHHHHHHHHHCCCCCEEEEeEEEEE
Confidence 34567999999999999999999996 6678888765331 223233 34899999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCCe
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENI 959 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~NI 959 (1141)
.+ ..++||||+++++|.+++.. ...+++..+..|+.||+.||.|||++ ||+||||||+||
T Consensus 103 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Ni 163 (360)
T 3eqc_A 103 DG--------------EISICMEHMDGGSLDQVLKK-----AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 163 (360)
T ss_dssp TT--------------EEEEEECCCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGE
T ss_pred CC--------------EEEEEEECCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHE
Confidence 55 35999999999999999976 23699999999999999999999996 999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||++....... .....||+.|+|||++.+ ..++.++|||||||++
T Consensus 164 l~~~~-------~~~kl~Dfg~~~~~~~~~------------~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 220 (360)
T 3eqc_A 164 LVNSR-------GEIKLCDFGVSGQLIDSM------------ANSFVGTRSYMSPERLQG----THYSVQSDIWSMGLSL 220 (360)
T ss_dssp EECTT-------CCEEECCCCCCHHHHHHC----------------CCCCTTCCHHHHTT----CCCSHHHHHHHHHHHH
T ss_pred EECCC-------CCEEEEECCCCccccccc------------ccCCCCCCCeECHHHHcC----CCCCchhhHHHHHHHH
Confidence 99987 789999999986543211 123468999999999976 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCC---CCchhHHhhhccCcc----------------ccccccCCCCCCchhhhhh
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKR---PRLTDELEALGSCHE----------------HEVAQSGSGFEKPEAELET 1100 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~---p~l~~~l~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 1100 (1141)
|+|++|+.||......+....+..... ...+........... ...... .. ........
T Consensus 221 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~ 297 (360)
T 3eqc_A 221 VEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNE-PP--PKLPSGVF 297 (360)
T ss_dssp HHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHS-CC--CCCCTTTS
T ss_pred HHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhcc-CC--CCCCcccc
Confidence 999999999988766554433311100 000000000000000 000000 00 00011135
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1101 LSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1101 ~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
+.++.+||.+||+.||.+|||+.|+++|+|+..
T Consensus 298 ~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~ 330 (360)
T 3eqc_A 298 SLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330 (360)
T ss_dssp CHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHH
T ss_pred cHHHHHHHHHHhhcChhhCCCHHHHhhChHhhc
Confidence 678999999999999999999999999999975
No 126
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=5.1e-38 Score=374.47 Aligned_cols=253 Identities=25% Similarity=0.387 Sum_probs=208.3
Q ss_pred CCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
...+|++.++||+|+||.||+|.+.+..||+|+.+... ..+. +.+|+.+|++++||||+++++++.+...
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~------~~~~----~~~E~~~l~~l~h~niv~~~~~~~~~~~ 260 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA------TAQA----FLAEASVMTQLRHSNLVQLLGVIVEEKG 260 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT------TSHH----HHHHHHHHHTCCCTTBCCEEEEEECTTS
T ss_pred ChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch------HHHH----HHHHHHHHHhccCCCEEEEEEEEEcCCC
Confidence 45679999999999999999999999999999864221 2233 3799999999999999999999875431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++|+|.++++. .+...+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus 261 -------------~~~iv~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~ 324 (450)
T 1k9a_A 261 -------------GLYIVTEYMAKGSLVDYLRS---RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSE 324 (450)
T ss_dssp -------------CEEEEEECCTTCBHHHHHHH---HCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECT
T ss_pred -------------ceEEEEEecCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECC
Confidence 35999999999999999986 23335799999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+++...... ....+++.|+|||++.+ ..++.++|||||||++|||+
T Consensus 325 ~-------~~~kl~DfG~a~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~sDvwslG~~l~el~ 380 (450)
T 1k9a_A 325 D-------NVAKVSDFGLTKEASSTQ-------------DTGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEIY 380 (450)
T ss_dssp T-------SCEEECCCTTCEECC-------------------CCCTTTSCHHHHHS----SCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEeeCCCcccccccc-------------cCCCCCcceeCHHHhcC----CCCCcHHHHHHHHHHHHHHH
Confidence 7 789999999997533211 12247889999999976 56889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |+.||.+....++...+..+..+..+. .+++.+.++|.+||+.||.+|||+
T Consensus 381 t~g~~P~~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dp~~Rpt~ 433 (450)
T 1k9a_A 381 SFGRVPYPRIPLKDVVPRVEKGYKMDAPD---------------------------GCPPAVYDVMKNCWHLDAATRPTF 433 (450)
T ss_dssp TTTCCSSTTSCTTTHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------cCCHHHHHHHHHHcCCChhHCcCH
Confidence 8 999998877666666665554332221 456779999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
.++++.+....
T Consensus 434 ~~l~~~L~~i~ 444 (450)
T 1k9a_A 434 LQLREQLEHIR 444 (450)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887654
No 127
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=6.7e-38 Score=353.62 Aligned_cols=272 Identities=26% Similarity=0.325 Sum_probs=197.8
Q ss_pred CCCceEe-eeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001143 805 FPSLSSC-DEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 880 (1141)
Q Consensus 805 ~~~y~i~-~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~ 880 (1141)
-+.|++. +.||+|+||.||+|.+ .+..+|+|+..... . ...+ .+.+|+.++.++ +||||+++++++.+
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~--~~~~----~~~~E~~~l~~~~~h~~i~~~~~~~~~ 82 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP--G--HIRS----RVFREVEMLYQCQGHRNVLELIEFFEE 82 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS--S--CCHH----HHHHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc--c--hhHH----HHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 3568885 7899999999999987 46778888864321 1 1122 337899999985 79999999999987
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.+ ..++||||+++++|.+++.. ...+++..++.++.||+.||+|||++||+||||||+|||
T Consensus 83 ~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil 143 (316)
T 2ac3_A 83 ED--------------RFYLVFEKMRGGSILSHIHK-----RRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143 (316)
T ss_dssp TT--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred CC--------------EEEEEEEcCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEE
Confidence 55 35999999999999999976 246899999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC-CCCCCchhhHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK-PNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~~~~s~ksDVWSLGviL 1039 (1141)
++.++ ....+||+|||++............ .........||+.|+|||++.+... ...++.++|||||||++
T Consensus 144 ~~~~~----~~~~~kl~Dfg~~~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il 216 (316)
T 2ac3_A 144 CEHPN----QVSPVKICDFDLGSGIKLNGDCSPI---STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216 (316)
T ss_dssp ESCSS----SSCSEEECCTTCCC----------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHH
T ss_pred EccCC----CcCceEEEEccCccccccCCccccc---cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHH
Confidence 98762 1134999999998765432111000 0111123459999999999864110 02367899999999999
Q ss_pred HHHHhCCCCCCCCCH---------------HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHH
Q 001143 1040 LELLTLQVPYMGLSE---------------LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1104 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~---------------~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1104 (1141)
|+|++|+.||.+... ..+...+..+....... .....+..+
T Consensus 217 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~ 272 (316)
T 2ac3_A 217 YILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK------------------------DWAHISCAA 272 (316)
T ss_dssp HHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHH------------------------HHTTSCHHH
T ss_pred HHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCch------------------------hcccCCHHH
Confidence 999999999976431 22334443332211110 011456679
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1105 VDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1105 ~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.+|+.+||+.||.+|||+.|+++|+|+...
T Consensus 273 ~~li~~~L~~dP~~Rps~~e~l~hp~~~~~ 302 (316)
T 2ac3_A 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQGC 302 (316)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred HHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence 999999999999999999999999999854
No 128
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=7.3e-38 Score=352.02 Aligned_cols=259 Identities=24% Similarity=0.248 Sum_probs=206.9
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|++. +..+|+|+..... ....+. +.+|+.++++++||||+++++++.+..
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~- 79 (304)
T 2jam_A 9 KTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSP----AFRDSS----LENEIAVLKKIKHENIVTLEDIYESTT- 79 (304)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC----------H----HHHHHHHHHHCCCTTBCCEEEEEECSS-
T ss_pred ccceeeeeccCCCCceEEEEEECCCCCEEEEEEEeccc----ccchHH----HHHHHHHHHhCCCCCeeehhhhcccCC-
Confidence 46899999999999999999984 6678888765321 111222 378999999999999999999988654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||++..
T Consensus 80 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~ 141 (304)
T 2jam_A 80 -------------HYYLVMQLVSGGELFDRILE-----RGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLT 141 (304)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESS
T ss_pred -------------EEEEEEEcCCCccHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEec
Confidence 35999999999999999876 236899999999999999999999999999999999999932
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
. ...+.+||+|||++....... .....||+.|+|||++.+ ..++.++|||||||++|+|+
T Consensus 142 ~----~~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l~ 201 (304)
T 2jam_A 142 P----EENSKIMITDFGLSKMEQNGI------------MSTACGTPGYVAPEVLAQ----KPYSKAVDCWSIGVITYILL 201 (304)
T ss_dssp S----STTCCEEBCSCSTTCCCCCBT------------THHHHSCCCBCCTTTBSS----CSCCHHHHHHHHHHHHHHHH
T ss_pred C----CCCCCEEEccCCcceecCCCc------------cccccCCCCccChHHhcc----CCCCchhhHHHHHHHHHHHH
Confidence 1 111789999999986533211 123458999999999876 56889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||......+....+..+....... .....+..+.+++.+||..||.+|||+.
T Consensus 202 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~dp~~Rps~~ 257 (304)
T 2jam_A 202 CGYPPFYEETESKLFEKIKEGYYEFESP------------------------FWDDISESAKDFICHLLEKDPNERYTCE 257 (304)
T ss_dssp HSSCTTTTSCHHHHHHHHHHCCCCCCTT------------------------TTTTSCHHHHHHHHHHHCSSTTTSCCHH
T ss_pred HCCCCCCCCCHHHHHHHHHcCCCCCCcc------------------------ccccCCHHHHHHHHHHcCCChhHCcCHH
Confidence 9999999887777777765544321100 0014566799999999999999999999
Q ss_pred HHHHHHHhhcCC
Q 001143 1124 DLYEMFVARTSS 1135 (1141)
Q Consensus 1124 ElL~~L~~~~~s 1135 (1141)
|+++|+|+....
T Consensus 258 ~~l~h~~~~~~~ 269 (304)
T 2jam_A 258 KALSHPWIDGNT 269 (304)
T ss_dssp HHHTSHHHHSSC
T ss_pred HHhcCccccCCC
Confidence 999999997653
No 129
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=9.7e-38 Score=356.61 Aligned_cols=268 Identities=24% Similarity=0.339 Sum_probs=206.2
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHH-HhhCCCCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRM-LGALRHSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~i-L~~L~HpNIVkllg~~ 878 (1141)
.....+|++.+.||+|+||.||+|++ .+..||+|+.... ..... ...+ ..|+.+ ++.++||||+++++++
T Consensus 47 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~--~~~~~-~~~~----~~e~~~~~~~~~h~~iv~~~~~~ 119 (340)
T 3an0_A 47 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRAT--VNSQE-QKRL----LMDLDISMRTVDCPFTVTFYGAL 119 (340)
T ss_dssp CCCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC--CCCHH-HHHH----HHHHHHHHTTCCCTTTCCEEEEE
T ss_pred EEehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccc--cCcHH-HHHH----HHHHHHHHhhcCCCcEEEEeeEE
Confidence 34567899999999999999999998 5667888875432 22222 2222 456655 6778999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSE 957 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~ 957 (1141)
.+.+. .++||||++ ++|.+++...... ...+++..++.|+.||+.||.|||++ ||+||||||+
T Consensus 120 ~~~~~--------------~~lv~e~~~-~~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~ 183 (340)
T 3an0_A 120 FREGD--------------VWICMELMD-TSLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPS 183 (340)
T ss_dssp ECSSC--------------EEEEECCCS-EEHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCST
T ss_pred EeCCc--------------EEEEHHHhh-CcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHH
Confidence 86553 499999998 5999998764333 35799999999999999999999987 9999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||++.+ +.+||+|||++......... ....||+.|+|||++.+......++.++|||||||
T Consensus 184 NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~ 245 (340)
T 3an0_A 184 NVLINAL-------GQVKMCDFGISGYLVDSVAK-----------TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGI 245 (340)
T ss_dssp TEEECST-------TCEEECCCSHHHHHSCHHHH-----------HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHH
T ss_pred HEEECCC-------CCEEEeeCCCceeccccccc-----------ccCCCCccccCccccccccccCCCCchhhHHHHHH
Confidence 9999887 78999999999765432111 12358999999999865333456889999999999
Q ss_pred HHHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|+|++|+.||... ...+....+.....+.... ...+..+.++|.+||..||
T Consensus 246 il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~li~~~l~~dp 299 (340)
T 3an0_A 246 TMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPA--------------------------DKFSAEFVDFTSQCLKKNS 299 (340)
T ss_dssp HHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCG--------------------------GGSCHHHHHHHHHHTCSSG
T ss_pred HHHHHHHCCCCCccccchHHHHHHHhcCCCCCCCc--------------------------ccCCHHHHHHHHHHccCCc
Confidence 999999999999753 3333333333322222110 1356679999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCCC
Q 001143 1117 TERPTAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~s~ 1136 (1141)
++|||+.|+++|+|+....+
T Consensus 300 ~~Rps~~ell~hp~f~~~~~ 319 (340)
T 3an0_A 300 KERPTYPELMQHPFFTLHES 319 (340)
T ss_dssp GGSCCHHHHTTSHHHHHHTT
T ss_pred ccCcCHHHHhcCcCcccccc
Confidence 99999999999999975433
No 130
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=9.4e-38 Score=370.15 Aligned_cols=298 Identities=18% Similarity=0.223 Sum_probs=202.1
Q ss_pred CCCceEeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.++|++.+.||+|+||.||+|.+.. ..||+|+. ..........+. +.+|+.++++++||||+++++++....
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~--~~~~~~~~~~~~----~~~E~~~l~~l~h~nIv~l~~~~~~~~ 98 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKV--NRMFEDLIDCKR----ILREITILNRLKSDYIIRLYDLIIPDD 98 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEE--CSTTTSHHHHHH----HHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEe--CchhcChHHHHH----HHHHHHHHHHcCCCCcceEEEEEecCC
Confidence 4679999999999999999999854 45666654 333333333333 489999999999999999999987643
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. .....|+||||++ ++|.++++. ...+++..++.|+.||+.||.|||++||+||||||+|||++
T Consensus 99 ~~---------~~~~~~lv~e~~~-~~L~~~~~~-----~~~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~ 163 (432)
T 3n9x_A 99 LL---------KFDELYIVLEIAD-SDLKKLFKT-----PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN 163 (432)
T ss_dssp TT---------TCCCEEEEEECCS-EEHHHHHHS-----SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred CC---------cCCeEEEEEecCC-cCHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEEC
Confidence 21 1235799999996 699999975 34699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeecccccccccccccccccc------------CCCCCCCCccCCCcccchhhhccccCCCCCCchh
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH------------RGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1030 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~------------~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1030 (1141)
.+ +.+||+|||+|+............. .........+||+.|+|||++.. ...++.++
T Consensus 164 ~~-------~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~---~~~~~~~~ 233 (432)
T 3n9x_A 164 QD-------CSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL---QENYTKSI 233 (432)
T ss_dssp TT-------CCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT---CSCCCTHH
T ss_pred CC-------CCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc---CCCCCccc
Confidence 87 8899999999987643221100000 00011235579999999999754 25688999
Q ss_pred hHHHHHHHHHHHHhC-----------CCCCCCCC-----------------HHHHHHHH-HhCCCCCchhHHhhhccCcc
Q 001143 1031 DIWSYGCLLLELLTL-----------QVPYMGLS-----------------ELEIHDLI-QMGKRPRLTDELEALGSCHE 1081 (1141)
Q Consensus 1031 DVWSLGviL~ELLTG-----------k~Pf~~~~-----------------~~el~~~I-~~~~~p~l~~~l~~~~~~~~ 1081 (1141)
|||||||++|||++| .++|.+.+ ..+....+ .....|... .+........
T Consensus 234 DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~-~~~~~~~~~~ 312 (432)
T 3n9x_A 234 DIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTED-DLKNINKPEV 312 (432)
T ss_dssp HHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHH-HHHTCCCHHH
T ss_pred ccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHH-HHHhccCHHH
Confidence 999999999999984 44443322 11222222 222222211 1111000000
Q ss_pred ccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1082 HEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1082 ~~~~~---~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
..... ..............++++.+||.+||+.||.+|||++|+++|+|+..-
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~ 368 (432)
T 3n9x_A 313 IKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDV 368 (432)
T ss_dssp HHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTT
T ss_pred HHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhc
Confidence 00000 000000011112467789999999999999999999999999999753
No 131
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=6.5e-38 Score=355.16 Aligned_cols=267 Identities=20% Similarity=0.317 Sum_probs=192.4
Q ss_pred CCCCceEeeeecccCceEEEEEEECCc-----cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGSA-----DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~~-----~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
...+|++.+.||+|+||.||+|.+... .+|+|+.+.. .......+. +.+|+.++++++||||+++++++
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~ 94 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKAD--IIASSDIEE----FLREAACMKEFDHPHVAKLVGVS 94 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC--------CHHHHH----HHHHHHHHTTCCCTTBCCCCEEE
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEeccc--ccCHHHHHH----HHHHHHHHHHCCCCceehhhcee
Confidence 356799999999999999999987443 5777775422 212233333 48999999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
...... ......++||||+++++|.+++...... ....+++..++.|+.||+.||.|||++||+||||||+
T Consensus 95 ~~~~~~--------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~ 166 (323)
T 3qup_A 95 LRSRAK--------GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAAR 166 (323)
T ss_dssp ECC---------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGG
T ss_pred eccccc--------cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcc
Confidence 764421 1123458999999999999999763321 1225999999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||++.+ +.+||+|||+++........ .......+++.|+|||++.+ ..++.++|||||||
T Consensus 167 NIli~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~ 227 (323)
T 3qup_A 167 NCMLAED-------MTVCVADFGLSRKIYSGDYY--------RQGCASKLPVKWLALESLAD----NLYTVHSDVWAFGV 227 (323)
T ss_dssp GEEECTT-------SCEEECCCCC-------------------------CCGGGCCHHHHHH----CCCCHHHHHHHHHH
T ss_pred eEEEcCC-------CCEEEeeccccccccccccc--------cccccccCcccccCchhhcC----CCCCCccchhhHHH
Confidence 9999887 78999999999765432211 11123347889999999987 56889999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|+|++ |+.||.+....+....+..+..+..+ ...+..+.+++.+||+.||
T Consensus 228 il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dp 280 (323)
T 3qup_A 228 TMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQP---------------------------PECMEEVYDLMYQCWSADP 280 (323)
T ss_dssp HHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHTTCSSG
T ss_pred HHHHHHhCCCCCccccChHHHHHHHhcCCCCCCC---------------------------CccCHHHHHHHHHHccCCh
Confidence 9999999 99999987777766666544432221 1445679999999999999
Q ss_pred CCCCCHHHHHHHHH
Q 001143 1117 TERPTAGDLYEMFV 1130 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~ 1130 (1141)
.+|||+.++++.+.
T Consensus 281 ~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 281 KQRPSFTCLRMELE 294 (323)
T ss_dssp GGSCCHHHHHHHHH
T ss_pred hhCcCHHHHHHHHH
Confidence 99999555554443
No 132
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1.4e-37 Score=347.77 Aligned_cols=272 Identities=25% Similarity=0.348 Sum_probs=216.0
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCC-CChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeE
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCG-SSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK 878 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~-~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~ 878 (1141)
...++|++.+.||+|+||.||+|.+. +..+|+|+....... ......+.....+.+|+.+++++. ||||+++++++
T Consensus 14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 93 (298)
T 1phk_A 14 GFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY 93 (298)
T ss_dssp -CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred chhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeee
Confidence 34678999999999999999999984 567888886543211 122333444556689999999996 99999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.... ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 94 ~~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~N 154 (298)
T 1phk_A 94 ETNT--------------FFFLVFDLMKKGELFDYLTE-----KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPEN 154 (298)
T ss_dssp ECSS--------------EEEEEEECCTTCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred ccCC--------------eEEEEEeccCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcce
Confidence 7654 45999999999999999976 2469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc--CCCCCCchhhHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH--KPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~~s~ksDVWSLG 1036 (1141)
|+++.+ +.+||+|||.+....... ......||+.|+|||++.+.. ....++.++||||||
T Consensus 155 il~~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG 216 (298)
T 1phk_A 155 ILLDDD-------MNIKLTDFGFSCQLDPGE-----------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTG 216 (298)
T ss_dssp EEECTT-------CCEEECCCTTCEECCTTC-----------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHH
T ss_pred EEEcCC-------CcEEEecccchhhcCCCc-----------ccccccCCccccCHHHhccccccccccCCcccccHhHH
Confidence 999887 789999999997654321 112346899999999986321 124578999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1037 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+++|+|++|..||......+....+..+....... .....+..+.+++.+||+.||
T Consensus 217 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~l~~li~~~l~~dp 272 (298)
T 1phk_A 217 VIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSP------------------------EWDDYSDTVKDLVSRFLVVQP 272 (298)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT------------------------TGGGSCHHHHHHHHHHCCSSG
T ss_pred HHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcc------------------------cccccCHHHHHHHHHHccCCc
Confidence 99999999999998877777666665443221110 001456779999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001143 1117 TERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~s 1135 (1141)
.+|||+.|+++|+|+....
T Consensus 273 ~~Rps~~~ll~h~~~~~~~ 291 (298)
T 1phk_A 273 QKRYTAEEALAHPFFQQYV 291 (298)
T ss_dssp GGSCCHHHHTTSGGGCTTC
T ss_pred ccCCCHHHHHhChHhhhcc
Confidence 9999999999999997543
No 133
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=7.7e-38 Score=358.91 Aligned_cols=260 Identities=21% Similarity=0.301 Sum_probs=196.3
Q ss_pred CCceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC--CCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH--SCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H--pNIVkllg~~~~~~ 882 (1141)
..|++.+.||+|+||.||+|.+ .+..+|+|+.... .......+.+ .+|+.++.+++| |||+++++++....
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~~~~~~iv~~~~~~~~~~ 82 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSY----RNEIAYLNKLQQHSDKIIRLYDYEITDQ 82 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECT--TCCHHHHHHH----HHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeecc--ccchHHHHHH----HHHHHHHHhhhhcCCceEEEeeeEeeCC
Confidence 4699999999999999999987 4556888876543 2233333444 799999999976 99999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++|||| .+++|.+++.. ...+++.++..|+.||+.||.|||++||+||||||+|||++
T Consensus 83 --------------~~~lv~e~-~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~ 142 (343)
T 3dbq_A 83 --------------YIYMVMEC-GNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 142 (343)
T ss_dssp --------------EEEEEECC-CSEEHHHHHHH-----SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred --------------EEEEEEeC-CCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE
Confidence 35999995 57899999986 34699999999999999999999999999999999999996
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-------CCCCCCchhhHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWSY 1035 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~s~ksDVWSL 1035 (1141)
. +.+||+|||+++........ .......||+.|+|||++.+.. ....++.++|||||
T Consensus 143 ~--------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Diwsl 206 (343)
T 3dbq_A 143 D--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 206 (343)
T ss_dssp T--------TEEEECCCSSSCCC--------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHH
T ss_pred C--------CcEEEeecccccccCccccc--------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHH
Confidence 3 67999999999765432111 1122456999999999986421 12467899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHH-HHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001143 1036 GCLLLELLTLQVPYMGLSEL-EIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~~~~~-el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~ 1113 (1141)
||++|+|++|+.||...... .....+.. ......+ ...+..+.+|+.+||+
T Consensus 207 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~L~ 259 (343)
T 3dbq_A 207 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---------------------------DIPEKDLQDVLKCCLK 259 (343)
T ss_dssp HHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC---------------------------CCSCHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCc---------------------------ccCCHHHHHHHHHHcC
Confidence 99999999999999764322 22222211 1111100 0234568999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001143 1114 ENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.||.+|||+.|+++|+|+...
T Consensus 260 ~dp~~Rpt~~e~l~hp~~~~~ 280 (343)
T 3dbq_A 260 RDPKQRISIPELLAHPYVQIQ 280 (343)
T ss_dssp SSTTTSCCHHHHHTSHHHHSC
T ss_pred CChhHCCCHHHHHhCcccccc
Confidence 999999999999999999754
No 134
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=5.2e-38 Score=357.97 Aligned_cols=257 Identities=19% Similarity=0.313 Sum_probs=200.9
Q ss_pred CCCCceEeeeecccCceEEEEEEECC--ccE----EEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS--ADA----AAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~--~~v----AvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
...+|++.++||+|+||+||+|++.. ..+ ++|. +.... ..... ..+.+|+.++++++||||++++++
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~--~~~~~-~~~~~----~~~~~E~~~l~~l~h~~iv~~~~~ 85 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE--LREAT-SPKAN----KEILDEAYVMASVDNPHVCRLLGI 85 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEE--C--------CH----HHHHHHHHHHHHCCBTTBCCEEEE
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEee--ccccc-CHHHH----HHHHHHHHHHHhCCCCCEeEEEEE
Confidence 45679999999999999999999843 333 3443 22111 11122 334899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+.+.. .++||||+++|+|.+++.. ....+++..++.|+.||+.||.|||++||+||||||+
T Consensus 86 ~~~~~---------------~~~v~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~ 146 (327)
T 3poz_A 86 CLTST---------------VQLITQLMPFGCLLDYVRE----HKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAAR 146 (327)
T ss_dssp EESSS---------------EEEEEECCTTCBHHHHHHH----STTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred EecCC---------------eEEEEEecCCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChh
Confidence 87543 3899999999999999976 2346999999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||++.+ +.+||+|||+++........ .......+|+.|+|||++.+ ..++.++|||||||
T Consensus 147 NIll~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~ 207 (327)
T 3poz_A 147 NVLVKTP-------QHVKITDFGLAKLLGAEEKE--------YHAEGGKVPIKWMALESILH----RIYTHQSDVWSYGV 207 (327)
T ss_dssp GEEEEET-------TEEEECCTTHHHHHTTTCC---------------CCCGGGSCHHHHHH----CCCCHHHHHHHHHH
T ss_pred eEEECCC-------CCEEEccCcceeEccCCccc--------ccccCCCccccccChHHhcc----CCCCchhhhhhhHH
Confidence 9999987 78999999999865432211 11123357889999999987 57889999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|||++ |+.||.+....++...+..+.....+ ...+..+.+++.+||+.||
T Consensus 208 il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~~p 260 (327)
T 3poz_A 208 TVWELMTFGSKPYDGIPASEISSILEKGERLPQP---------------------------PICTIDVYMIMVKCWMIDA 260 (327)
T ss_dssp HHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCC---------------------------TTBCHHHHHHHHHHTCSCG
T ss_pred HHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCC---------------------------ccCCHHHHHHHHHHcCCCh
Confidence 9999999 99999987776666666554432221 1345679999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001143 1117 TERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~ 1132 (1141)
.+|||+.|+++++...
T Consensus 261 ~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 261 DSRPKFRELIIEFSKM 276 (327)
T ss_dssp GGSCCHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHH
Confidence 9999999999998654
No 135
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=5.8e-38 Score=370.70 Aligned_cols=284 Identities=23% Similarity=0.254 Sum_probs=206.1
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.++||+|+||.||+|++. +..||+|+..... ... .+|+.++++++|||||++++++.....
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~--------~~~----~~E~~il~~l~hpniv~l~~~~~~~~~ 121 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK--------RFK----NRELQIMRKLDHCNIVRLRYFFYSSGE 121 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT--------TSC----CHHHHHHHTCCCTTBCCEEEEEEEEET
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc--------hhH----HHHHHHHHHcCCCCccceeeEEeccCC
Confidence 36999999999999999999994 5677887653221 111 479999999999999999999865321
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.....+.++||||++ ++|.+.+...... ...+++..++.|+.||+.||.|||++||+||||||+|||++.
T Consensus 122 --------~~~~~~~~lv~e~~~-~~l~~~~~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~ 191 (420)
T 1j1b_A 122 --------KKDEVYLNLVLDYVP-ETVYRVARHYSRA-KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP 191 (420)
T ss_dssp --------TTTEEEEEEEEECCC-EEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEET
T ss_pred --------CCcceeEEeehhccc-ccHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeC
Confidence 012335689999998 5787777653332 357999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+. +.+||+|||+++.+.... ......||+.|+|||++.+ ...++.++|||||||++|||+
T Consensus 192 ~~------~~~kl~DFG~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~ell 251 (420)
T 1j1b_A 192 DT------AVLKLCDFGSAKQLVRGE-----------PNVSYICSRYYRAPELIFG---ATDYTSSIDVWSAGCVLAELL 251 (420)
T ss_dssp TT------TEEEECCCTTCEECCTTC-----------CCCSCCSCTTSCCHHHHTT---CSSCCTHHHHHHHHHHHHHHH
T ss_pred CC------CeEEeccchhhhhcccCC-----------CceeeeeCCCcCCHHHHcC---CCCCCchhhhHHHHHHHHHHH
Confidence 52 578999999997653311 1123468999999999875 236889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhcc-CccccccccCCCCCC-chhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGS-CHEHEVAQSGSGFEK-PEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|+.||.+.+..+....+ .....+... .+..... .....+..... ... .......+.++.+||.+||+.||.+||
T Consensus 252 ~G~~pf~~~~~~~~l~~i~~~lg~p~~~-~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~ 329 (420)
T 1j1b_A 252 LGQPIFPGDSGVDQLVEIIKVLGTPTRE-QIREMNPNYTEFKFPQIKA-HPWTKVFRPRTPPEAIALCSRLLEYTPTARL 329 (420)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCSCCHH-HHHHHCSCCCCCCCCCCCC-CCHHHHSCTTSCHHHHHHHHHHSCSSGGGSC
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHH-HHHhhChhhhhhccCccCC-CCHHHhcCCCCCHHHHHHHHHhccCChhHCC
Confidence 999999987766655444 333333222 1111100 00000000000 000 001124567899999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001143 1121 TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~ 1133 (1141)
|+.|+++|+||..
T Consensus 330 t~~e~l~hp~f~~ 342 (420)
T 1j1b_A 330 TPLEACAHSFFDE 342 (420)
T ss_dssp CHHHHHTSGGGGG
T ss_pred CHHHHhCCHhhcc
Confidence 9999999999964
No 136
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=7.5e-38 Score=366.59 Aligned_cols=285 Identities=22% Similarity=0.241 Sum_probs=204.2
Q ss_pred CCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
.+|++.++||+|+||+||+|++. ...+|+|...... ... .+|+.+++.++||||+++++++......
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~--------~~~----~~E~~il~~l~h~niv~l~~~~~~~~~~ 107 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK--------RFK----NRELQIMRIVKHPNVVDLKAFFYSNGDK 107 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT--------TSC----CHHHHHHHTCCCTTBCCEEEEEEEESSS
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc--------chH----HHHHHHHHhCCCCCcceEEEEEEecCCC
Confidence 46999999999999999999984 3446666542111 011 3799999999999999999998764321
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee-c
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID-L 963 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld-~ 963 (1141)
......++||||+++ ++...+..... ....+++..++.|+.||+.||.|||++||+||||||+|||++ .
T Consensus 108 --------~~~~~~~lv~e~~~~-~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~ 177 (394)
T 4e7w_A 108 --------KDEVFLNLVLEYVPE-TVYRASRHYAK-LKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPP 177 (394)
T ss_dssp --------SSCEEEEEEEECCSE-EHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETT
T ss_pred --------CCceEEEEEeeccCc-cHHHHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCC
Confidence 123356899999985 55555543222 234799999999999999999999999999999999999998 4
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+|+...... ......||+.|+|||++.+ ...++.++|||||||++|||+
T Consensus 178 ~-------~~~kL~DFG~a~~~~~~~-----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwSlG~il~ell 236 (394)
T 4e7w_A 178 S-------GVLKLIDFGSAKILIAGE-----------PNVSYICSRYYRAPELIFG---ATNYTTNIDIWSTGCVMAELM 236 (394)
T ss_dssp T-------TEEEECCCTTCEECCTTC-----------CCCSSCSCGGGCCHHHHTT---CSSCCTHHHHHHHHHHHHHHH
T ss_pred C-------CcEEEeeCCCcccccCCC-----------CCcccccCcCccCHHHHcC---CCCCCcHHHHHHHHHHHHHHH
Confidence 5 789999999997653321 1123468999999999875 245889999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 TLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+|+.||.+.+..+....+ .....+................+................++++.+||.+||+.||.+|||+
T Consensus 237 ~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 316 (394)
T 4e7w_A 237 QGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTA 316 (394)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCH
Confidence 999999988776655554 3333333221111100000000000000000000112356789999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
.|+++|+||..
T Consensus 317 ~e~l~hp~f~~ 327 (394)
T 4e7w_A 317 IEALCHPFFDE 327 (394)
T ss_dssp HHHHTSGGGST
T ss_pred HHHhcChhhhh
Confidence 99999999974
No 137
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=4e-38 Score=365.65 Aligned_cols=285 Identities=20% Similarity=0.233 Sum_probs=193.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||.||+|.+. +..||+|+ +..........+. +.+|+.+++.++||||+++++++....
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~--~~~~~~~~~~~~~----~~~E~~~l~~l~hpnIv~~~~~~~~~~ 101 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKK--LSRPFQSIIHAKR----TYRELRLLKHMKHENVIGLLDVFTPAR 101 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEE--CSSTTSSHHHHHH----HHHHHHHHHHCCCTTBCCCSEEECSCS
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEE--eCccccCHHHHHH----HHHHHHHHHhCCCCCCCcEEEEEecCC
Confidence 367999999999999999999985 45566665 4332223333333 479999999999999999999987543
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ......++||||+ +++|.++++. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 102 ~~--------~~~~~~~lv~e~~-~~~L~~~~~~------~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~ 166 (367)
T 2fst_X 102 SL--------EEFNDVYLVTHLM-GADLNNIVKC------QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN 166 (367)
T ss_dssp SG--------GGCCCCEEEEECC-CEECC-----------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC
T ss_pred cc--------ccCCeEEEEeccc-CCCHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC
Confidence 21 1123459999999 6899998864 3699999999999999999999999999999999999999
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++..... .....||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 167 ~~-------~~~kL~DFG~a~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el 223 (367)
T 2fst_X 167 ED-------CELKILDFGLARHTADE-------------MTGYVATRWYRAPEIMLN---WMHYNQTVDIWSVGCIMAEL 223 (367)
T ss_dssp TT-------CCEEECC----------------------------CCCTTCCHHHHTT---CCSCCTTHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeecccccccccc-------------CCCcCcCcCccChHHHcC---CcCCCchhhHHHHHHHHHHH
Confidence 87 78999999999754321 123468999999999875 24678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCC---CCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGS---GFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
++|+.||.+.+..+....+......+....+............+... ...........++.+.+||.+||+.||.+|
T Consensus 224 l~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R 303 (367)
T 2fst_X 224 LTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKR 303 (367)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGS
T ss_pred HhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccC
Confidence 99999999888777666553321111111111110000000000000 000111112456789999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
||+.|+++|+|+..
T Consensus 304 ~t~~e~L~hp~~~~ 317 (367)
T 2fst_X 304 ITAAQALAHAYFAQ 317 (367)
T ss_dssp CCHHHHHTSGGGTT
T ss_pred cCHHHHhcChhhhh
Confidence 99999999999974
No 138
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=9.1e-38 Score=355.19 Aligned_cols=268 Identities=25% Similarity=0.394 Sum_probs=208.4
Q ss_pred CCCCCCCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccc
Q 001143 797 CSGLDPGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVE 873 (1141)
Q Consensus 797 ~~~~~~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVk 873 (1141)
...++...+.+|++.+.||+|+||.||+|++. +..+.++++.+.... .....+. +.+|+.+++++ +||||++
T Consensus 16 ~~~~p~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~----~~~E~~~l~~l~~hp~iv~ 90 (327)
T 1fvr_A 16 PTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA-SKDDHRD----FAGELEVLCKLGHHPNIIN 90 (327)
T ss_dssp CCCSSBCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CH----HHHHHHHHTTCCCCTTBCC
T ss_pred CcccccccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeecccc-chHHHHH----HHHHHHHHHhccCCCchhh
Confidence 34567778899999999999999999999874 444433444343211 1222233 47999999999 8999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-----------cCCCCCCHHHHHHHHHHHHHHHH
Q 001143 874 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-----------TGEKHVSVKLALFIAQDVAAALV 942 (1141)
Q Consensus 874 llg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-----------~~~~~Ls~~~i~~Ia~QIa~gL~ 942 (1141)
+++++.+.+ ..++||||+++++|.+++..... .....+++..++.++.||+.||.
T Consensus 91 ~~~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~ 156 (327)
T 1fvr_A 91 LLGACEHRG--------------YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMD 156 (327)
T ss_dssp EEEEEEETT--------------EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHH
T ss_pred hceeeeeCC--------------ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 999998655 34999999999999999976320 11246999999999999999999
Q ss_pred HHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001143 943 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1022 (1141)
Q Consensus 943 yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1022 (1141)
|||++||+||||||+|||++.+ +.+||+|||+++...... ......+++.|+|||++.+
T Consensus 157 ~LH~~~ivH~dlkp~NIl~~~~-------~~~kL~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~--- 215 (327)
T 1fvr_A 157 YLSQKQFIHRDLAARNILVGEN-------YVAKIADFGLSRGQEVYV-----------KKTMGRLPVRWMAIESLNY--- 215 (327)
T ss_dssp HHHHTTEECSCCSGGGEEECGG-------GCEEECCTTCEESSCEEC-----------CC----CCTTTCCHHHHHH---
T ss_pred HHHhCCccCCCCccceEEEcCC-------CeEEEcccCcCccccccc-----------cccCCCCCccccChhhhcc---
Confidence 9999999999999999999887 789999999986432211 1123357889999999976
Q ss_pred CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhH
Q 001143 1023 PNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1101 (1141)
Q Consensus 1023 ~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1141)
..++.++|||||||++|+|++ |..||.+....+....+..+..+..+ ...+
T Consensus 216 -~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 267 (327)
T 1fvr_A 216 -SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKP---------------------------LNCD 267 (327)
T ss_dssp -CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCC---------------------------TTBC
T ss_pred -ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCCCCCC---------------------------CCCC
Confidence 457899999999999999998 99999988777766665444322111 1455
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1102 SFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1102 ~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
+.+.+++.+||..||.+|||+.|+++++...
T Consensus 268 ~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 268 DEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 6799999999999999999999999998764
No 139
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.7e-38 Score=370.11 Aligned_cols=262 Identities=24% Similarity=0.274 Sum_probs=194.6
Q ss_pred CCCceEe-eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhh-CCCCCccceeeeEec
Q 001143 805 FPSLSSC-DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA-LRHSCIVEMYGHKIS 880 (1141)
Q Consensus 805 ~~~y~i~-~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~-L~HpNIVkllg~~~~ 880 (1141)
+.+|.+. ++||+|+||+||+|.+. +..||+|+.. . . .. +.+|+.++.+ .+||||+++++++..
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~--~---~----~~----~~~E~~~~~~~~~hp~iv~l~~~~~~ 126 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQ--D---C----PK----ARREVELHWRASQCPHIVRIVDVYEN 126 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEE--C---S----HH----HHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeC--c---c----hh----HHHHHHHHHHhcCCCCcceEeEEEee
Confidence 5678776 78999999999999985 5668888753 1 1 11 2578888754 489999999999864
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ....+.|+||||++||+|.+++.. .+...+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus 127 ~~----------~~~~~~~lv~E~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nil 193 (400)
T 1nxk_A 127 LY----------AGRKCLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 193 (400)
T ss_dssp EE----------TTEEEEEEEEECCCSEEHHHHHHC---C---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEE
T ss_pred cc----------cCCcEEEEEEEeCCCCcHHHHHHH---hCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEE
Confidence 11 012256999999999999999975 22346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+. ..+.+||+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|
T Consensus 194 l~~~~----~~~~~kl~DFG~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ 254 (400)
T 1nxk_A 194 YTSKR----PNAILKLTDFGFAKETTSHN-----------SLTTPCYTPYYVAPEVLGP----EKYDKSCDMWSLGVIMY 254 (400)
T ss_dssp ESSSS----TTCCEEECCCTTCEECC----------------------CTTCCGGGSCC----CCSSSHHHHHHHHHHHH
T ss_pred EecCC----CCccEEEEecccccccCCCC-----------ccccCCCCCCccCHhhcCC----CCCCCcccHHHHHHHHH
Confidence 98731 12789999999997543211 1124468999999999865 57889999999999999
Q ss_pred HHHhCCCCCCCCCHHH----HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1041 ELLTLQVPYMGLSELE----IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~e----l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+|++|..||.+..... ....+..+..... .+. ....+.++.+||.+||+.||
T Consensus 255 ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~-----------------------~~~-~~~~s~~~~~li~~~L~~dP 310 (400)
T 1nxk_A 255 ILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFP-----------------------NPE-WSEVSEEVKMLIRNLLKTEP 310 (400)
T ss_dssp HHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCC-----------------------TTT-TTTSCHHHHHHHHTTSCSSG
T ss_pred HHHhCCCCCCCCccccccHHHHHHHHcCcccCC-----------------------Ccc-cccCCHHHHHHHHHHCCCCh
Confidence 9999999997643221 2233322221100 000 01456779999999999999
Q ss_pred CCCCCHHHHHHHHHhhcCC
Q 001143 1117 TERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~s 1135 (1141)
.+|||+.|+++|+|+....
T Consensus 311 ~~Rpt~~eil~hp~~~~~~ 329 (400)
T 1nxk_A 311 TQRMTITEFMNHPWIMQST 329 (400)
T ss_dssp GGSCCHHHHHHSHHHHTTT
T ss_pred hHCcCHHHHhcCccccCCC
Confidence 9999999999999998643
No 140
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1e-37 Score=372.26 Aligned_cols=258 Identities=22% Similarity=0.378 Sum_probs=209.5
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
...+|++.++||+|+||.||+|.+. +..||+|+.+.. . ...+.+ .+|+.+|++++|||||++++++.. .
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~--~---~~~~~~----~~E~~~l~~l~h~~iv~l~~~~~~-~ 255 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--S---MSVEAF----LAEANVMKTLQHDKLVKLHAVVTK-E 255 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTT--S---BCHHHH----HHHHHHHTTCCCTTBCCEEEEECS-S
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCC--C---ccHHHH----HHHHHHHhhCCCCCEeeEEEEEeC-C
Confidence 3457999999999999999999985 566888875422 1 122333 899999999999999999999863 2
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++|+|.++++... ...+++..+..|+.||+.||.|||++||+||||||+|||++
T Consensus 256 --------------~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~ 318 (454)
T 1qcf_A 256 --------------PIYIITEFMAKGSLLDFLKSDE---GSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS 318 (454)
T ss_dssp --------------SCEEEECCCTTCBHHHHHHSHH---HHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC
T ss_pred --------------ccEEEEeecCCCcHHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEC
Confidence 2399999999999999997521 23588999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++........ ......+|+.|+|||++.. ..++.++|||||||++|||
T Consensus 319 ~~-------~~~kl~DFG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwslG~~l~el 378 (454)
T 1qcf_A 319 AS-------LVCKIADFGLARVIEDNEYT---------AREGAKFPIKWTAPEAINF----GSFTIKSDVWSFGILLMEI 378 (454)
T ss_dssp TT-------CCEEECSTTGGGGBCCHHHH---------TTCSSSSCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEeeCCCceEcCCCcee---------ccCCCcccccccCHHHhcc----CCCCcHHHHHhHHHHHHHH
Confidence 87 78999999999865432111 1112346789999999986 5688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |+.||.+....++...+..+.....+. .+++.+.+||.+||+.||++|||
T Consensus 379 ~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dp~~RPt 431 (454)
T 1qcf_A 379 VTYGRIPYPGMSNPEVIRALERGYRMPRPE---------------------------NCPEELYNIMMRCWKNRPEERPT 431 (454)
T ss_dssp HTTSCCSSTTCCHHHHHHHHHHTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhHCcC
Confidence 99 999999888888777776554332211 45667999999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001143 1122 AGDLYEMFVARTSS 1135 (1141)
Q Consensus 1122 a~ElL~~L~~~~~s 1135 (1141)
+.+|++.+......
T Consensus 432 ~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 432 FEYIQSVLDDFYTA 445 (454)
T ss_dssp HHHHHHHHHTSSSS
T ss_pred HHHHHHHHHHHHhc
Confidence 99999998776443
No 141
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=8.1e-38 Score=351.14 Aligned_cols=256 Identities=28% Similarity=0.408 Sum_probs=210.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
-+.|++.+.||+|+||.||+|.+. +..+|+|+...... ....+. +.+|+.++++++||||+++++++....
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~ 93 (303)
T 3a7i_A 21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA---EDEIED----IQQEITVLSQCDSPYVTKYYGSYLKDT 93 (303)
T ss_dssp GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTC---STTHHH----HHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEeccccc---HHHHHH----HHHHHHHHHhCCCCCEeEEEEEEecCC
Confidence 456999999999999999999984 66788888654322 122233 479999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 94 --------------~~~lv~e~~~~~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~ 153 (303)
T 3a7i_A 94 --------------KLWIIMEYLGGGSALDLLEP------GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS 153 (303)
T ss_dssp --------------EEEEEEECCTTEEHHHHHTT------SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred --------------eEEEEEEeCCCCcHHHHHhc------CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC
Confidence 34999999999999999864 4699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||+++|+|
T Consensus 154 ~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 212 (303)
T 3a7i_A 154 EH-------GEVKLADFGVAGQLTDTQI----------KRNTFVGTPFWMAPEVIKQ----SAYDSKADIWSLGITAIEL 212 (303)
T ss_dssp TT-------SCEEECCCTTCEECBTTBC----------CBCCCCSCGGGCCHHHHTT----CCBCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeecccceecCcccc----------ccCccCCCcCccCHHHHhc----CCCCchhhhHHHHHHHHHH
Confidence 87 7899999999976543211 1123468999999999976 5678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||......+....+.....+.+. ...+..+.+++.+||+.||.+|||+
T Consensus 213 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dp~~Rps~ 265 (303)
T 3a7i_A 213 ARGEPPHSELHPMKVLFLIPKNNPPTLE---------------------------GNYSKPLKEFVEACLNKEPSFRPTA 265 (303)
T ss_dssp HHSSCTTTTSCHHHHHHHHHHSCCCCCC---------------------------SSCCHHHHHHHHHHCCSSGGGSCCH
T ss_pred ccCCCCCCCcCHHHHHHHhhcCCCCCCc---------------------------cccCHHHHHHHHHHcCCChhhCcCH
Confidence 9999999887776666655444332221 1345679999999999999999999
Q ss_pred HHHHHHHHhhcCC
Q 001143 1123 GDLYEMFVARTSS 1135 (1141)
Q Consensus 1123 ~ElL~~L~~~~~s 1135 (1141)
.++++|+|+....
T Consensus 266 ~~ll~~~~~~~~~ 278 (303)
T 3a7i_A 266 KELLKHKFILRNA 278 (303)
T ss_dssp HHHTTCHHHHHHC
T ss_pred HHHhhChhhhcCC
Confidence 9999999997543
No 142
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.4e-37 Score=345.34 Aligned_cols=256 Identities=21% Similarity=0.332 Sum_probs=201.2
Q ss_pred CCCCceEeeeecccCceEEEEEEECC---c--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS---A--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~---~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
...+|++.+.||+|+||.||+|.+.. . .+|+|+. ... ......+. +.+|+.++++++||||+++++++
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~--~~~-~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~ 82 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTC--KKD-CTLDNKEK----FMSEAVIMKNLDHPHIVKLIGII 82 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEEC--CTT-SCHHHHHH----HHHHHHHHHHHCCTTBCCEEEEE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEec--ccc-cCchHHHH----HHHHHHHHHhCCCCCcceEEEEE
Confidence 45679999999999999999998743 2 2666653 321 12233333 48999999999999999999997
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.. .++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 83 ~~~~---------------~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~N 143 (281)
T 3cc6_A 83 EEEP---------------TWIIMELYPYGELGHYLERN----KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRN 143 (281)
T ss_dssp CSSS---------------CEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGG
T ss_pred cCCC---------------CEEEEecCCCCCHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccce
Confidence 6432 28999999999999999762 2358999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
|+++.+ +.+||+|||++......... ......+|+.|+|||++.+ ..++.++||||||++
T Consensus 144 il~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 203 (281)
T 3cc6_A 144 ILVASP-------ECVKLGDFGLSRYIEDEDYY---------KASVTRLPIKWMSPESINF----RRFTTASDVWMFAVC 203 (281)
T ss_dssp EEEEET-------TEEEECCCCGGGCC------------------CCCCCGGGCCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEECCC-------CcEEeCccCCCccccccccc---------ccccCCCCcceeCchhhcc----CCCCchhccHHHHHH
Confidence 999987 78999999999765432111 1123357889999999976 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|+|++ |+.||......+....+..+..+..+. ..++.+.+++.+||..||.
T Consensus 204 l~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~ 256 (281)
T 3cc6_A 204 MWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD---------------------------LCPPVLYTLMTRCWDYDPS 256 (281)
T ss_dssp HHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHHHHHccCCch
Confidence 999998 999998766666665555443322211 3456799999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001143 1118 ERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~ 1132 (1141)
+|||+.|+++++...
T Consensus 257 ~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 257 DRPRFTELVCSLSDV 271 (281)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999998654
No 143
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=3.2e-37 Score=349.04 Aligned_cols=262 Identities=21% Similarity=0.325 Sum_probs=208.3
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
...+|++.+.||+|+||.||+|.+. +..+|+|+.. .. ........ +.+|+.++++++||||+++++
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~--~~-~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~ 95 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN--EA-ASMRERIE----FLNEASVMKEFNCHHVVRLLG 95 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECC--TT-SCHHHHHH----HHHHHHHGGGCCCTTBCCEEE
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecc--cc-cCHHHHHH----HHHHHHHHHhcCCCCEeeeEE
Confidence 3457999999999999999999874 3456776643 21 12222333 479999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----CCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----GEKHVSVKLALFIAQDVAAALVELHSKHIMH 951 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvH 951 (1141)
++.+.... ++||||+++++|.+++...... ....+++..++.++.||+.||.|||++||+|
T Consensus 96 ~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H 161 (322)
T 1p4o_A 96 VVSQGQPT--------------LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVH 161 (322)
T ss_dssp EECSSSSC--------------EEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBC
T ss_pred EEccCCcc--------------EEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 99765543 9999999999999999764321 1235799999999999999999999999999
Q ss_pred cCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhh
Q 001143 952 RDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVD 1031 (1141)
Q Consensus 952 rDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksD 1031 (1141)
|||||+||+++.+ +.+||+|||++.......... ......+|+.|+|||++.+ ..++.++|
T Consensus 162 ~dikp~NIli~~~-------~~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~----~~~~~~~D 222 (322)
T 1p4o_A 162 RDLAARNCMVAED-------FTVKIGDFGMTRDIYETDYYR--------KGGKGLLPVRWMSPESLKD----GVFTTYSD 222 (322)
T ss_dssp SCCSGGGEEECTT-------CCEEECCTTCCCGGGGGGCEE--------GGGSSEECGGGCCHHHHHH----CCCCHHHH
T ss_pred CCCccceEEEcCC-------CeEEECcCccccccccccccc--------cccCCCCCCCccChhhhcc----CCCCchhh
Confidence 9999999999987 789999999997654322110 1112357889999999986 56889999
Q ss_pred HHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001143 1032 IWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1110 (1141)
Q Consensus 1032 VWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~ 1110 (1141)
||||||++|+|++ |..||.+....+....+..+..+..+ ...+..+.+++.+
T Consensus 223 i~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~ 275 (322)
T 1p4o_A 223 VWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP---------------------------DNCPDMLFELMRM 275 (322)
T ss_dssp HHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCC---------------------------CCCCHHHHHHHHH
Confidence 9999999999999 89999988777777666554432221 1455679999999
Q ss_pred hcccCCCCCCCHHHHHHHHHhh
Q 001143 1111 CTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1111 cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
||+.||.+|||+.|+++++...
T Consensus 276 ~l~~dp~~Rps~~e~l~~L~~~ 297 (322)
T 1p4o_A 276 CWQYNPKMRPSFLEIISSIKEE 297 (322)
T ss_dssp HTCSSGGGSCCHHHHHHHHGGG
T ss_pred HcCCCcccCcCHHHHHHHHHHh
Confidence 9999999999999999998765
No 144
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1e-37 Score=389.58 Aligned_cols=259 Identities=24% Similarity=0.292 Sum_probs=211.1
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~ 878 (1141)
...+.+|++.++||+|+||.||+|++. +..+|+|+.+.... ........+..|..++..+ +||||+++++++
T Consensus 337 ~~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~-----~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~ 411 (674)
T 3pfq_A 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVV-----IQDDDVECTMVEKRVLALPGKPPFLTQLHSCF 411 (674)
T ss_dssp ---CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHH-----HHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC
T ss_pred cccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEecccc-----ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE
Confidence 346789999999999999999999985 45588887653211 0111122347899999888 699999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.+ ..||||||++||+|.++++.. ..+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 412 ~~~~--------------~~~lV~E~~~gg~L~~~l~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~N 472 (674)
T 3pfq_A 412 QTMD--------------RLYFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDN 472 (674)
T ss_dssp BCSS--------------EEEEEEECCCSCBHHHHHHHH-----SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTT
T ss_pred EeCC--------------EEEEEEeCcCCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhh
Confidence 8655 359999999999999999862 469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||+|+...... .......||+.|+|||++.+ ..|+.++|||||||+
T Consensus 473 ILl~~~-------g~ikL~DFGla~~~~~~~----------~~~~~~~GT~~Y~APE~l~~----~~~~~~~DvwSlGvi 531 (674)
T 3pfq_A 473 VMLDSE-------GHIKIADFGMCKENIWDG----------VTTKTFCGTPDYIAPEIIAY----QPYGKSVDWWAFGVL 531 (674)
T ss_dssp EEECSS-------SCEEECCCTTCEECCCTT----------CCBCCCCSCSSSCCHHHHTC----CCBSTHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEeecceeeccccCC----------cccccccCCCcccCHhhhcC----CCCCccceEechHHH
Confidence 999988 889999999997532211 11234579999999999976 578999999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|||++|+.||.+.+..++...|...... ++ ...+.++.+||.+||+.||.+
T Consensus 532 lyelltG~~Pf~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~dP~~ 583 (674)
T 3pfq_A 532 LYEMLAGQAPFEGEDEDELFQSIMEHNVA-YP---------------------------KSMSKEAVAICKGLMTKHPGK 583 (674)
T ss_dssp HHHHHHSSCSSCCSSHHHHHHHHHSSCCC-CC---------------------------TTSCHHHHHHHHHHSCSSSTT
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHhCCCC-CC---------------------------ccCCHHHHHHHHHHccCCHHH
Confidence 99999999999998888888877654321 11 145567999999999999999
Q ss_pred CCCH-----HHHHHHHHhhc
Q 001143 1119 RPTA-----GDLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa-----~ElL~~L~~~~ 1133 (1141)
||++ +||++|+||..
T Consensus 584 R~~~~~~~~~ei~~h~ff~~ 603 (674)
T 3pfq_A 584 RLGCGPEGERDIKEHAFFRY 603 (674)
T ss_dssp CTTCSTTHHHHHHSSGGGSS
T ss_pred CCCCCCCcHHHHhcCccccC
Confidence 9997 99999999974
No 145
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.3e-37 Score=345.05 Aligned_cols=257 Identities=22% Similarity=0.308 Sum_probs=206.2
Q ss_pred CCCceEee-eecccCceEEEEEEE----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 805 FPSLSSCD-EAGKSVSSSLFRCKF----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~-~LG~GsfG~Vy~a~~----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
..+|.+.+ .||+|+||.||+|.+ .+..+|+|+.... ......+. +.+|+.++++++||||+++++++.
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~ 80 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG---TEKADTEE----MMREAQIMHQLDNPYIVRLIGVCQ 80 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS---CCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc---cchhHHHH----HHHHHHHHHhCCCCCEeEEEEEec
Confidence 35677776 999999999999986 3455777775422 12333333 489999999999999999999984
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.. ..++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||
T Consensus 81 ~~---------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni 141 (287)
T 1u59_A 81 AE---------------ALMLVMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNV 141 (287)
T ss_dssp SS---------------SEEEEEECCTTEEHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred CC---------------CcEEEEEeCCCCCHHHHHHh----CCccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheE
Confidence 32 24999999999999999864 234699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||+++
T Consensus 142 li~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 203 (287)
T 1u59_A 142 LLVNR-------HYAKISDFGLSKALGADDSYY-------TARSAGKWPLKWYAPECINF----RKFSSRSDVWSYGVTM 203 (287)
T ss_dssp EEEET-------TEEEECCCTTCEECTTCSCEE-------CCCCSSCCCGGGCCHHHHHH----CEECHHHHHHHHHHHH
T ss_pred EEcCC-------CCEEECcccceeeeccCccee-------eccccccccccccCHHHhcc----CCCCchhhHHHHHHHH
Confidence 99987 789999999998664322110 11123357899999999976 4578999999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+|++ |+.||......+....+..+..+..+. ..++.+.+++.+||..||.+
T Consensus 204 ~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~ 256 (287)
T 1u59_A 204 WEALSYGQKPYKKMKGPEVMAFIEQGKRMECPP---------------------------ECPPELYALMSDCWIYKWED 256 (287)
T ss_dssp HHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSGGG
T ss_pred HHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCC---------------------------CcCHHHHHHHHHHcCCChhh
Confidence 99999 999998877777777666554332221 45567999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001143 1119 RPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~ 1132 (1141)
||++.+++++++..
T Consensus 257 Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 257 RPDFLTVEQRMRAC 270 (287)
T ss_dssp SCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHH
Confidence 99999999998875
No 146
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=7.2e-38 Score=381.88 Aligned_cols=260 Identities=23% Similarity=0.321 Sum_probs=208.3
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
+....+|++.++||+|+||.||+|++. +..+|+|+...... ........+.+|+.++++++|||||++++++.
T Consensus 180 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~-----~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~ 254 (576)
T 2acx_A 180 PVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI-----KKRKGEAMALNEKQILEKVNSRFVVSLAYAYE 254 (576)
T ss_dssp CCCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHH-----HHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred CccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhh-----hhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEe
Confidence 345678999999999999999999984 66788887643211 11111233478999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.. ..|+||||++||+|.+++.. .+...+++..++.|+.||+.||+|||++||+||||||+||
T Consensus 255 ~~~--------------~l~lVmEy~~gg~L~~~l~~---~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNI 317 (576)
T 2acx_A 255 TKD--------------ALCLVLTLMNGGDLKFHIYH---MGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENI 317 (576)
T ss_dssp CSS--------------EEEEEECCCCSCBHHHHHHS---SSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred eCC--------------EEEEEEEcCCCCcHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheE
Confidence 655 35999999999999999875 2334599999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||+|+....... .....||+.|+|||++.+ ..++.++|||||||++
T Consensus 318 Lld~~-------g~vKL~DFGla~~~~~~~~-----------~~~~~GT~~Y~APEvl~~----~~~~~~~DiwSLGvil 375 (576)
T 2acx_A 318 LLDDH-------GHIRISDLGLAVHVPEGQT-----------IKGRVGTVGYMAPEVVKN----ERYTFSPDWWALGCLL 375 (576)
T ss_dssp EECTT-------SCEEECCCTTCEECCTTCC-----------EECCCSCGGGCCHHHHTT----CEESSHHHHHHHHHHH
T ss_pred EEeCC-------CCeEEEecccceecccCcc-----------ccccCCCccccCHHHHcC----CCCCccchHHHHHHHH
Confidence 99987 8899999999976543211 113469999999999986 5678999999999999
Q ss_pred HHHHhCCCCCCCCC----HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1040 LELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|||++|+.||.+.. ..++...+..... .++ ...+.++.+||.+||+.|
T Consensus 376 yeLltG~~PF~~~~~~~~~~~i~~~i~~~~~-~~p---------------------------~~~s~~~~dLI~~lL~~d 427 (576)
T 2acx_A 376 YEMIAGQSPFQQRKKKIKREEVERLVKEVPE-EYS---------------------------ERFSPQARSLCSQLLCKD 427 (576)
T ss_dssp HHHHHSSCSSSCSSSCCCHHHHHHHHHHCCC-CCC---------------------------TTSCHHHHHHHHHHTCSS
T ss_pred HHHHhCCCCCcccccchhHHHHHHHhhcccc-cCC---------------------------ccCCHHHHHHHHHhccCC
Confidence 99999999998643 2334444432211 111 145667999999999999
Q ss_pred CCCCC-----CHHHHHHHHHhhc
Q 001143 1116 PTERP-----TAGDLYEMFVART 1133 (1141)
Q Consensus 1116 P~~RP-----Sa~ElL~~L~~~~ 1133 (1141)
|.+|| +++|+++|+||..
T Consensus 428 P~~R~g~~~~sa~eil~HpfF~~ 450 (576)
T 2acx_A 428 PAERLGCRGGSAREVKEHPLFKK 450 (576)
T ss_dssp GGGSTTCSSSHHHHHHTSGGGTT
T ss_pred HHHcCCCCCCCHHHHHhChhhcc
Confidence 99999 8999999999975
No 147
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=2.4e-37 Score=357.76 Aligned_cols=289 Identities=18% Similarity=0.220 Sum_probs=209.9
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|.+. +..||+|+.. .. ......+ .+.+|+.++++++||||+++++++.....
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~--~~-~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 99 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS--PF-EHQTYCQ----RTLREIKILLRFRHENIIGINDIIRAPTI 99 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC--CT-TCHHHHH----HHHHHHHHHHHCCCTTBCCCCEEECCSST
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEec--cc-cCcHHHH----HHHHHHHHHHhcCCCCCccceeEEecCCc
Confidence 57999999999999999999985 4456666543 21 1222223 34799999999999999999999875431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. .....++||||++ ++|.++++. ..+++..+..|+.||+.||.|||++||+||||||+|||++.
T Consensus 100 ~---------~~~~~~iv~e~~~-~~L~~~l~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~ 163 (364)
T 3qyz_A 100 E---------QMKDVYIVQDLME-TDLYKLLKT------QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNT 163 (364)
T ss_dssp T---------TCCCEEEEEECCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECT
T ss_pred c---------ccceEEEEEcccC-cCHHHHHHh------CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECC
Confidence 1 2235699999997 699999875 35999999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++......... ........||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 164 ~-------~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~il~ell 226 (364)
T 3qyz_A 164 T-------CDLKICDFGLARVADPDHDH-------TGFLTEYVATRWYRAPEIMLN---SKGYTKSIDIWSVGCILAEML 226 (364)
T ss_dssp T-------CCEEECCCTTCEECCGGGCB-------CCTTCCCCSCGGGCCHHHHHT---BCSCSTHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEeCcceEecCCCCCc-------cccccccccccCCCCCHHhcC---CCCCCcchhHHHHHHHHHHHH
Confidence 7 78999999999765432211 011224579999999998765 245789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcccc-ccc--cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHE-VAQ--SGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|+.||.+....+....+...........+.......... ... ..............+.++.+||.+||+.||.+||
T Consensus 227 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 306 (364)
T 3qyz_A 227 SNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 306 (364)
T ss_dssp HSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSC
T ss_pred HCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCC
Confidence 9999998877666655553221111111111100000000 000 0000001111124567899999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
|+.|+++|+|+...
T Consensus 307 t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 307 EVEQALAHPYLEQY 320 (364)
T ss_dssp CHHHHHTSGGGTTT
T ss_pred CHHHHhcCcchhhc
Confidence 99999999999753
No 148
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=1.5e-37 Score=350.46 Aligned_cols=259 Identities=25% Similarity=0.380 Sum_probs=203.8
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
....+|++.+.||+|+||.||+|.+. +..+|+|+..... ..+. +.+|+.++++++||||+++++++..
T Consensus 26 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~------~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~ 95 (314)
T 3com_A 26 QPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES------DLQE----IIKEISIMQQCDSPHVVKYYGSYFK 95 (314)
T ss_dssp ----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS------CCHH----HHHHHHHHHTCCCTTBCCEEEEEEE
T ss_pred cchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH------HHHH----HHHHHHHHHhCCCCCCccEEEEEEe
Confidence 34567999999999999999999985 6678888765321 1122 3789999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+
T Consensus 96 ~~--------------~~~lv~e~~~~~~L~~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil 157 (314)
T 3com_A 96 NT--------------DLWIVMEYCGAGSVSDIIRLR----NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNIL 157 (314)
T ss_dssp TT--------------EEEEEEECCTTEEHHHHHHHH----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred CC--------------EEEEEeecCCCCCHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEE
Confidence 54 349999999999999999741 346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||.+........ ......||+.|+|||++.+ ..++.++||||||+++|
T Consensus 158 ~~~~-------~~~kl~dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~ 216 (314)
T 3com_A 158 LNTE-------GHAKLADFGVAGQLTDTMA----------KRNTVIGTPFWMAPEVIQE----IGYNCVADIWSLGITAI 216 (314)
T ss_dssp ECTT-------CCEEECCCTTCEECBTTBS----------CBCCCCSCGGGCCHHHHSS----SCBCTTHHHHHHHHHHH
T ss_pred ECCC-------CCEEEeecccchhhhhhcc----------ccCccCCCCCccChhhcCC----CCCCccccHHHHHHHHH
Confidence 9887 7899999999976543211 1123468999999999876 46789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|+.||...........+.....+.... ....+..+.+++.+||..||.+||
T Consensus 217 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rp 271 (314)
T 3com_A 217 EMAEGKPPYADIHPMRAIFMIPTNPPPTFRK-------------------------PELWSDNFTDFVKQCLVKSPEQRA 271 (314)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSS-------------------------GGGSCHHHHHHHHHHTCSCTTTSC
T ss_pred HHHhCCCCCCCCChHHHHHHHhcCCCcccCC-------------------------cccCCHHHHHHHHHHccCChhhCc
Confidence 9999999998777665554443333222110 113456799999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001143 1121 TAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~s 1135 (1141)
|+.++++|+|+....
T Consensus 272 t~~~ll~~~~~~~~~ 286 (314)
T 3com_A 272 TATQLLQHPFVRSAK 286 (314)
T ss_dssp CHHHHTTSHHHHTCC
T ss_pred CHHHHHhCHHHhcCC
Confidence 999999999998654
No 149
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-38 Score=364.08 Aligned_cols=263 Identities=22% Similarity=0.273 Sum_probs=203.7
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE-----CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKF-----GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 875 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~-----~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkll 875 (1141)
...+.+|++.++||+|+||.||+|++ .+..+|+|+.+...........+.+ .+|+.+++++ +||||++++
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~----~~E~~~l~~l~~h~~iv~~~ 125 (355)
T 1vzo_A 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHT----RTERQVLEHIRQSPFLVTLH 125 (355)
T ss_dssp CCCGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGC----CCHHHHHHHHHTCTTBCCEE
T ss_pred cccccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHH----HHHHHHHHHccCCCceeEEE
Confidence 44568899999999999999999998 5677899986432111111112223 6799999999 699999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 955 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLK 955 (1141)
+++.... ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+|||||
T Consensus 126 ~~~~~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlk 186 (355)
T 1vzo_A 126 YAFQTET--------------KLHLILDYINGGELFTHLSQ-----RERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIK 186 (355)
T ss_dssp EEEEETT--------------EEEEEECCCCSCBHHHHHHH-----HSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCC
T ss_pred EEEeeCc--------------eEEEEeecCCCCCHHHHHHH-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 9998655 34999999999999999976 2369999999999999999999999999999999
Q ss_pred CCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1035 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1035 (1141)
|+|||++.+ +.+||+|||+++........ ......||+.|+|||++.+. ...++.++|||||
T Consensus 187 p~NIll~~~-------~~~kl~DfG~a~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~--~~~~~~~~Dvwsl 248 (355)
T 1vzo_A 187 LENILLDSN-------GHVVLTDFGLSKEFVADETE---------RAYDFCGTIEYMAPDIVRGG--DSGHDKAVDWWSL 248 (355)
T ss_dssp GGGEEECTT-------SCEEESCSSEEEECCGGGGG---------GGCGGGSCCTTCCHHHHTTC--C---CTHHHHHHH
T ss_pred HHHEEECCC-------CcEEEeeCCCCeecccCCCC---------cccCcccCcCccChhhhcCC--CCCCCchhhHHHH
Confidence 999999887 78999999999765432111 11234699999999999752 1346899999999
Q ss_pred HHHHHHHHhCCCCCCCCC----HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHh
Q 001143 1036 GCLLLELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRC 1111 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~c 1111 (1141)
||++|+|++|+.||.... ...+...+.....+ .+ ...+..+.+||.+|
T Consensus 249 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~---------------------------~~~~~~~~~li~~~ 300 (355)
T 1vzo_A 249 GVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPP-YP---------------------------QEMSALAKDLIQRL 300 (355)
T ss_dssp HHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCC-CC---------------------------cccCHHHHHHHHHH
Confidence 999999999999996432 22333333222111 10 14456789999999
Q ss_pred cccCCCCCC-----CHHHHHHHHHhhc
Q 001143 1112 TEENPTERP-----TAGDLYEMFVART 1133 (1141)
Q Consensus 1112 L~~DP~~RP-----Sa~ElL~~L~~~~ 1133 (1141)
|..||.+|| ++.|+++|+|+..
T Consensus 301 L~~dP~~R~~~~~~s~~ell~h~~f~~ 327 (355)
T 1vzo_A 301 LMKDPKKRLGCGPRDADEIKEHLFFQK 327 (355)
T ss_dssp TCSSGGGSTTSSTTTHHHHHTSGGGTT
T ss_pred hhhCHHHhcCCCCCCHHHHHcCcchhc
Confidence 999999999 9999999999974
No 150
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=353.35 Aligned_cols=269 Identities=24% Similarity=0.369 Sum_probs=204.7
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEec
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKIS 880 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~ 880 (1141)
...+|++.+.||+|+||.||+|++ .+..+|+|+..... . ..+. +.+|+.+++++ +||||+++++++..
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~---~~~~----~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--D---EEEE----IKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--S---TTHH----HHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--c---cHHH----HHHHHHHHHhccCCCCeeeeeeEEee
Confidence 456799999999999999999998 56778888865331 1 1123 37899999999 79999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.... ......++||||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+|||
T Consensus 93 ~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl 161 (326)
T 2x7f_A 93 KNPP--------GMDDQLWLVMEFCGAGSVTDLIKNT---KGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161 (326)
T ss_dssp CC----------CCCCEEEEEEECCTTEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEE
T ss_pred ccCc--------cccceEEEEEEcCCCCcHHHHHHhc---ccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEE
Confidence 4310 1123579999999999999999862 2346899999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL 1039 (1141)
++.+ +.+||+|||++........ ......||+.|+|||++.... ....++.++|||||||++
T Consensus 162 ~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il 224 (326)
T 2x7f_A 162 LTEN-------AEVKLVDFGVSAQLDRTVG----------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITA 224 (326)
T ss_dssp ECTT-------CCEEECCCTTTC-----------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHH
T ss_pred EcCC-------CCEEEeeCcCceecCcCcc----------ccccccCCccccChhhhccccccCcCCCccchHHHHHHHH
Confidence 9877 7899999999876543111 112346899999999986321 124678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|..||...........+.....+.... ...+..+.++|.+||..||.+|
T Consensus 225 ~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dp~~R 278 (326)
T 2x7f_A 225 IEMAEGAPPLCDMHPMRALFLIPRNPAPRLKS--------------------------KKWSKKFQSFIESCLVKNHSQR 278 (326)
T ss_dssp HHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSC--------------------------SCSCHHHHHHHHHHCCSSGGGS
T ss_pred HHHHhCCCCCCCCcHHHHHHHhhcCccccCCc--------------------------cccCHHHHHHHHHHhccChhhC
Confidence 99999999998877666555554433222110 1345679999999999999999
Q ss_pred CCHHHHHHHHHhhcCC
Q 001143 1120 PTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~s 1135 (1141)
||+.++++|+|+....
T Consensus 279 ps~~~ll~hp~~~~~~ 294 (326)
T 2x7f_A 279 PATEQLMKHPFIRDQP 294 (326)
T ss_dssp CCHHHHHTSHHHHCCT
T ss_pred CCHHHHhhChHHhhCc
Confidence 9999999999997543
No 151
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=6.8e-38 Score=348.70 Aligned_cols=262 Identities=20% Similarity=0.312 Sum_probs=197.4
Q ss_pred CCCCceEeeeecccCceEEEEEEECC---------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccce
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS---------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 874 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~---------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl 874 (1141)
..++|++.+.||+|+||+||+|.+.. ..+++|+.... .... ...+.+|+.++++++||||+++
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~----~~~~----~~~~~~E~~~l~~l~h~~iv~~ 77 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA----HRNY----SESFFEAASMMSKLSHKHLVLN 77 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG----GGGG----HHHHHHHHHHHHTSCCTTBCCE
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc----cHHH----HHHHHHHHHHHHhCCCCCEeEE
Confidence 45679999999999999999998743 34777775321 1122 2334899999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 954 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDL 954 (1141)
++++.+.+.. ++||||+++++|.+++... ...+++..++.|+.||+.||.|||++||+||||
T Consensus 78 ~~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dl 139 (289)
T 4fvq_A 78 YGVCVCGDEN--------------ILVQEFVKFGSLDTYLKKN----KNCINILWKLEVAKQLAAAMHFLEENTLIHGNV 139 (289)
T ss_dssp EEEECCTTCC--------------EEEEECCTTCBHHHHHHHT----GGGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCC
T ss_pred EEEEEeCCCC--------------EEEEECCCCCCHHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHhhCCeECCCc
Confidence 9999875543 8999999999999999862 234999999999999999999999999999999
Q ss_pred CCCCeeeeccccc-CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHH
Q 001143 955 KSENILIDLERKK-ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIW 1033 (1141)
Q Consensus 955 KP~NILld~~~~~-~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVW 1033 (1141)
||+|||++.+... ....+.+||+|||.+....... ...||+.|+|||++.+. ..++.++|||
T Consensus 140 kp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~y~aPE~~~~~---~~~~~~~Diw 202 (289)
T 4fvq_A 140 CAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD--------------ILQERIPWVPPECIENP---KNLNLATDKW 202 (289)
T ss_dssp CGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHH--------------HHHHTTTTSCHHHHHCG---GGCCHHHHHH
T ss_pred CcceEEEecCCcccccccceeeeccCcccccccCcc--------------ccCCcCcccCHHHhCCC---CCCCchhHHH
Confidence 9999999877210 0111239999999986543211 23478899999998752 3578999999
Q ss_pred HHHHHHHHHHhC-CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001143 1034 SYGCLLLELLTL-QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1112 (1141)
Q Consensus 1034 SLGviL~ELLTG-k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL 1112 (1141)
||||++|+|++| .+||................. .+. ..+..+.+++.+||
T Consensus 203 slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~--~~~---------------------------~~~~~l~~li~~~l 253 (289)
T 4fvq_A 203 SFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQ--LPA---------------------------PKAAELANLINNCM 253 (289)
T ss_dssp HHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCC--CCC---------------------------CSSCTTHHHHHHHS
T ss_pred HHHHHHHHHHcCCCCCccccchHHHHHHhhccCC--CCC---------------------------CCCHHHHHHHHHHc
Confidence 999999999995 555655444443333222111 000 12334889999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhcCCCC
Q 001143 1113 EENPTERPTAGDLYEMFVARTSSSI 1137 (1141)
Q Consensus 1113 ~~DP~~RPSa~ElL~~L~~~~~s~~ 1137 (1141)
+.||.+|||+.++++++....++..
T Consensus 254 ~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 254 DYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp CSSGGGSCCHHHHHHHHHTCC----
T ss_pred CCChhHCcCHHHHHHHHHHhcCCCC
Confidence 9999999999999999988766544
No 152
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=1.5e-37 Score=347.14 Aligned_cols=263 Identities=24% Similarity=0.410 Sum_probs=195.2
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~ 884 (1141)
-.+|++.++||+|+||+||+|++.+ .+|+|+.+.. .......+.+ .+|+.++++++||||++++++....
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~-~vavK~~~~~--~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~--- 92 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG-DVAVKMLNVT--APTPQQLQAF----KNEVGVLRKTRHVNILLFMGYSTAP--- 92 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS-EEEEEEESCS--SCCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEECSS---
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC-ceEEEEEecc--CCCHHHHHHH----HHHHHHHHhCCCCcEEEEEeeccCC---
Confidence 4569999999999999999999765 4888876543 3333444444 8999999999999999999975432
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..++||||+++++|.+++.. ....+++..++.|+.||+.||.|||++||+||||||+||+++.+
T Consensus 93 ------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~ 156 (289)
T 3og7_A 93 ------------QLAIVTQWCEGSSLYHHLHA----SETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHED 156 (289)
T ss_dssp ------------SCEEEEECCCEEEHHHHHTT----C---CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETT
T ss_pred ------------ccEEEEEecCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCC
Confidence 23899999999999999864 23469999999999999999999999999999999999999987
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+.+||+|||++......... .......||+.|+|||++... ....++.++||||||+++|+|++
T Consensus 157 -------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~-~~~~~~~~~Di~slG~il~el~~ 220 (289)
T 3og7_A 157 -------NTVKIGDFGLATEKSRWSGS--------HQFEQLSGSILWMAPEVIRMQ-DSNPYSFQSDVYAFGIVLYELMT 220 (289)
T ss_dssp -------TEEEECCCC--------------------------CCCTTCCHHHHC-----CCSCHHHHHHHHHHHHHHHHH
T ss_pred -------CCEEEccceecccccccccc--------ccccccCCCccccCchhhccc-CCCCCCcccchHHHHHHHHHHHH
Confidence 78999999999754432111 112234689999999998632 12567889999999999999999
Q ss_pred CCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 LQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 Gk~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|+.||.+....+ +...+..+....... .....+++.+.+++.+||+.||.+|||+.
T Consensus 221 g~~p~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 277 (289)
T 3og7_A 221 GQLPYSNINNRDQIIEMVGRGSLSPDLS-----------------------KVRSNCPKRMKRLMAECLKKKRDERPSFP 277 (289)
T ss_dssp SSCTTSSCCCHHHHHHHHHHTSCCCCTT-----------------------SSCTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred CCCCccccchHHHHHHHhcccccCcchh-----------------------hccccCCHHHHHHHHHHccCChhhCCCHH
Confidence 999998754433 444444333221110 00114567899999999999999999999
Q ss_pred HHHHHHHhh
Q 001143 1124 DLYEMFVAR 1132 (1141)
Q Consensus 1124 ElL~~L~~~ 1132 (1141)
++++.+...
T Consensus 278 ell~~L~~l 286 (289)
T 3og7_A 278 RILAEIEEL 286 (289)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 999988754
No 153
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.1e-38 Score=356.29 Aligned_cols=258 Identities=22% Similarity=0.294 Sum_probs=202.0
Q ss_pred CCCCCceEeeeecccCceEEEEEEECC--cc----EEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGS--AD----AAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~--~~----vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
....+|++.++||+|+||+||+|.+.. .. +++|+.. ... .....+.+ .+|+.++++++||||+++++
T Consensus 10 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~--~~~-~~~~~~~~----~~e~~~l~~l~h~~iv~~~~ 82 (325)
T 3kex_A 10 FKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIE--DKS-GRQSFQAV----TDHMLAIGSLDHAHIVRLLG 82 (325)
T ss_dssp CCTTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEEC--CTT-SCSCBCSC----CHHHHHHHTCCCTTBCCEEE
T ss_pred cCHhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEecc--ccc-cHHHHHHH----HHHHHHHhcCCCCCcCeEEE
Confidence 345689999999999999999999843 33 4555432 111 11112223 68999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
++.+. ..++||||+++|+|.+++... ...+++..+..|+.||+.||.|||++||+||||||
T Consensus 83 ~~~~~---------------~~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp 143 (325)
T 3kex_A 83 LCPGS---------------SLQLVTQYLPLGSLLDHVRQH----RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAA 143 (325)
T ss_dssp EECBS---------------SEEEEEECCTTCBSHHHHHSS----GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSS
T ss_pred EEcCC---------------ccEEEEEeCCCCCHHHHHHHc----cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccch
Confidence 88632 248999999999999998751 24689999999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
+|||++.+ +.+||+|||+++........ .......||+.|+|||++.+ ..++.++||||||
T Consensus 144 ~Nil~~~~-------~~~kl~Dfg~a~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG 204 (325)
T 3kex_A 144 RNVLLKSP-------SQVQVADFGVADLLPPDDKQ--------LLYSEAKTPIKWMALESIHF----GKYTHQSDVWSYG 204 (325)
T ss_dssp TTEEESSS-------SCEEECSCSGGGGSCCCTTC--------CC-----CCTTTSCHHHHHH----CCCCHHHHHHHHH
T ss_pred heEEECCC-------CeEEECCCCcccccCccccc--------ccccCCCCcccccChHHhcc----CCCChhhHhHHhH
Confidence 99999887 78999999999875432211 11224468889999999986 5688999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1037 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1037 viL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|++|+|++ |..||.+....++...+..+..+..+. ..+..+.+++.+||..|
T Consensus 205 ~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~li~~~l~~d 257 (325)
T 3kex_A 205 VTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQ---------------------------ICTIDVYMVMVKCWMID 257 (325)
T ss_dssp HHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCCCT---------------------------TBCTTTTHHHHHHTCSC
T ss_pred HHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCCC---------------------------cCcHHHHHHHHHHcCCC
Confidence 99999999 999998877666666665544332221 23345788999999999
Q ss_pred CCCCCCHHHHHHHHHhh
Q 001143 1116 PTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~ 1132 (1141)
|.+|||+.++++++...
T Consensus 258 p~~Rps~~el~~~l~~~ 274 (325)
T 3kex_A 258 ENIRPTFKELANEFTRM 274 (325)
T ss_dssp TTTSCCHHHHHHHHHHH
T ss_pred hhhCcCHHHHHHHHHHH
Confidence 99999999999998764
No 154
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=9.8e-38 Score=350.80 Aligned_cols=270 Identities=25% Similarity=0.348 Sum_probs=205.2
Q ss_pred ceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
|...++||+|+||.||+|.+.+..+|+|+.............+ .+.+|+.++++++||||+++++++.+....
T Consensus 33 ~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~--- 105 (307)
T 2nru_A 33 SVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQ----QFDQEIKVMAKCQHENLVELLGFSSDGDDL--- 105 (307)
T ss_dssp TTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHH----HHHHHHHHHHHCCCTTBCCEEEEECSSSSC---
T ss_pred cccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHH----HHHHHHHHHHhcCCCCeEEEEEEEecCCce---
Confidence 5667999999999999999999999999865332222222223 348999999999999999999999865543
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 967 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~ 967 (1141)
++||||+++++|.+++.... ....+++..+..++.||+.||.|||++||+||||||+||+++.+
T Consensus 106 -----------~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~--- 169 (307)
T 2nru_A 106 -----------CLVYVYMPNGSLLDRLSCLD--GTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEA--- 169 (307)
T ss_dssp -----------EEEEECCTTCBHHHHHHTGG--GCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTT---
T ss_pred -----------EEEEEecCCCcHHHHHHhcc--CCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCC---
Confidence 99999999999999997532 23469999999999999999999999999999999999999887
Q ss_pred CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCC
Q 001143 968 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQV 1047 (1141)
Q Consensus 968 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~ 1047 (1141)
+.+||+|||++......... .......||+.|+|||++.+ .++.++||||||+++|+|++|..
T Consensus 170 ----~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~g~~~y~aPE~~~~-----~~~~~~Dv~slG~il~~l~~g~~ 232 (307)
T 2nru_A 170 ----FTAKISDFGLARASEKFAQT--------VMTSRIVGTTAYMAPEALRG-----EITPKSDIYSFGVVLLEIITGLP 232 (307)
T ss_dssp ----CCEEECCCTTCEECCSCSSC--------EECSSCCSCGGGCCHHHHTT-----EECTHHHHHHHHHHHHHHHHCCC
T ss_pred ----CcEEEeeccccccccccccc--------ccccccCCCcCcCChHHhcC-----CCCccchhHHHHHHHHHHHHCCC
Confidence 78999999999765432211 01123468999999999865 36789999999999999999999
Q ss_pred CCCCCCHHH----HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1048 PYMGLSELE----IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1048 Pf~~~~~~e----l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
||......+ +...+... ...+..... .. ........+..+.+++.+||+.||.+|||+.
T Consensus 233 p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------~~-----~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ 295 (307)
T 2nru_A 233 AVDEHREPQLLLDIKEEIEDE-EKTIEDYID-----------KK-----MNDADSTSVEAMYSVASQCLHEKKNKRPDIK 295 (307)
T ss_dssp SBCTTBSSSBTTHHHHHHHTT-SCCHHHHSC-----------SS-----CSCCCHHHHHHHHHHHHHHTCSSTTTSCCHH
T ss_pred CcccCcchHHHHHHHHHhhhh-hhhhhhhcc-----------cc-----ccccchHHHHHHHHHHHHHcCCCcccCcCHH
Confidence 997643322 12222111 111111000 00 0111235678899999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001143 1124 DLYEMFVARTS 1134 (1141)
Q Consensus 1124 ElL~~L~~~~~ 1134 (1141)
++++++.....
T Consensus 296 ~l~~~L~~l~~ 306 (307)
T 2nru_A 296 KVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhc
Confidence 99999987654
No 155
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-37 Score=350.11 Aligned_cols=253 Identities=25% Similarity=0.464 Sum_probs=196.3
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
..+..+|++.+.||+|+||.||+|++.+..+|+|+.. . ....+. +.+|+.++++++||||+++++++.+.
T Consensus 4 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~--~----~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~~~~ 73 (307)
T 2eva_A 4 MIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIE--S----ESERKA----FIVELRQLSRVNHPNIVKLYGACLNP 73 (307)
T ss_dssp BCCGGGEEEEEEEECCSSSEEEEEEETTEEEEEEECS--S----TTHHHH----HHHHHHHHHHCCCTTBCCEEEBCTTT
T ss_pred cCCHhHeeeeeEeecCCCceEEEEEECCeeEEEEEec--C----hhHHHH----HHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence 3456789999999999999999999999888888743 1 122333 37999999999999999999987532
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCCCC
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---KHIMHRDIKSEN 958 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs---~gIvHrDLKP~N 958 (1141)
.++||||+++++|.+++... .....+++..+..++.||+.||.|||+ +||+||||||+|
T Consensus 74 ----------------~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~N 135 (307)
T 2eva_A 74 ----------------VCLVMEYAEGGSLYNVLHGA--EPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135 (307)
T ss_dssp ----------------TEEEEECCTTCBHHHHHHCS--SSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGG
T ss_pred ----------------cEEEEEcCCCCCHHHHHhcc--CCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhH
Confidence 28999999999999999752 112247899999999999999999999 899999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.++ ..+||+|||++....... ....||+.|+|||++.+ ..++.++|||||||+
T Consensus 136 Ill~~~~------~~~kl~Dfg~~~~~~~~~-------------~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~i 192 (307)
T 2eva_A 136 LLLVAGG------TVLKICDFGTACDIQTHM-------------TNNKGSAAWMAPEVFEG----SNYSEKCDVFSWGII 192 (307)
T ss_dssp EEEETTT------TEEEECCCCC-------------------------CCTTSSCHHHHTC----CCCCTHHHHHHHHHH
T ss_pred EEEeCCC------CEEEEccccccccccccc-------------ccCCCCCceEChhhhCC----CCCCcHHHHHHHHHH
Confidence 9998762 248999999986543211 12358999999999976 568899999999999
Q ss_pred HHHHHhCCCCCCCCC--HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1039 LLELLTLQVPYMGLS--ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~--~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+|+|++|+.||.... .......+..+..+... ...+..+.+++.+||+.||
T Consensus 193 l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dp 245 (307)
T 2eva_A 193 LWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLI---------------------------KNLPKPIESLMTRCWSKDP 245 (307)
T ss_dssp HHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCB---------------------------TTCCHHHHHHHHHHTCSSG
T ss_pred HHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcc---------------------------cccCHHHHHHHHHHhcCCh
Confidence 999999999997532 22333333333322211 1445679999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001143 1117 TERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~ 1132 (1141)
.+|||+.++++++...
T Consensus 246 ~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 246 SQRPSMEEIVKIMTHL 261 (307)
T ss_dssp GGSCCHHHHHHHHHHH
T ss_pred hhCcCHHHHHHHHHHH
Confidence 9999999999988764
No 156
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.6e-38 Score=355.54 Aligned_cols=268 Identities=21% Similarity=0.280 Sum_probs=201.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
++|++.+.||+|+||.||+|.+. +..||+|+...................+.+|+.++++++||||+++++++....
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 88 (322)
T 2ycf_A 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED- 88 (322)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-
T ss_pred hceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-
Confidence 46999999999999999999985 467888875433211111111111223479999999999999999999986432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.
T Consensus 89 --------------~~lv~e~~~~~~L~~~~~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~ 149 (322)
T 2ycf_A 89 --------------YYIVLELMEGGELFDKVVG-----NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS 149 (322)
T ss_dssp --------------EEEEEECCTTEETHHHHST-----TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESS
T ss_pred --------------eEEEEecCCCCcHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEec
Confidence 4999999999999998864 347999999999999999999999999999999999999986
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
++ ....+||+|||++......... ....||+.|+|||++.+.. ...++.++|||||||++|+|+
T Consensus 150 ~~----~~~~~kl~Dfg~~~~~~~~~~~-----------~~~~gt~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~~l~ 213 (322)
T 2ycf_A 150 QE----EDCLIKITDFGHSKILGETSLM-----------RTLCGTPTYLAPEVLVSVG-TAGYNRAVDCWSLGVILFICL 213 (322)
T ss_dssp SS----SSCCEEECCCTTCEECCCCHHH-----------HHHHSCCTTCCHHHHHHTT-TTTCTTHHHHHHHHHHHHHHH
T ss_pred CC----CCCeEEEccCccceeccccccc-----------ccccCCcCccCchhhccCC-CCCCCchhhHHHHHHHHHHHH
Confidence 52 1146999999999765432111 1235899999999985311 246789999999999999999
Q ss_pred hCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 TLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 TGk~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+|..||...... .+...+..+.....+. .....+..+.+++.+||..||.+|||+
T Consensus 214 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~li~~~l~~dP~~Rps~ 269 (322)
T 2ycf_A 214 SGYPPFSEHRTQVSLKDQITSGKYNFIPE------------------------VWAEVSEKALDLVKKLLVVDPKARFTT 269 (322)
T ss_dssp HSSCSSCSTTCSSCHHHHHHHTCCCCCHH------------------------HHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred hCCCCCcccchHHHHHHHHHhCccccCch------------------------hhhhcCHHHHHHHHHHcccCHhhCCCH
Confidence 999999754322 2334444433322221 111456779999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
.++++|+|+..
T Consensus 270 ~~~l~h~~~~~ 280 (322)
T 2ycf_A 270 EEALRHPWLQD 280 (322)
T ss_dssp HHHHTSGGGCC
T ss_pred HHHhhCcCcCC
Confidence 99999999853
No 157
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.9e-37 Score=350.96 Aligned_cols=260 Identities=21% Similarity=0.334 Sum_probs=201.9
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCc------cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceee
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGSA------DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYG 876 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~~------~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg 876 (1141)
....+|++.+.||+|+||.||+|.+... .+|+|+.... ........ +.+|+.++++++||||+++++
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~ 113 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG---YTEKQRVD----FLGEAGIMGQFSHHNIIRLEG 113 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT---CCHHHHHH----HHHHHHHHHTCCCTTBCCEEE
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC---CCHHHHHH----HHHHHHHHHhCCCCCCCcEEE
Confidence 3456799999999999999999987432 3777765422 12233333 489999999999999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
++..... .++||||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||
T Consensus 114 ~~~~~~~--------------~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp 175 (333)
T 1mqb_A 114 VISKYKP--------------MMIITEYMENGALDKFLRE----KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAA 175 (333)
T ss_dssp EECSSSS--------------EEEEEECCTTEEHHHHHHH----TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCG
T ss_pred EEecCCC--------------cEEEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence 9876543 4999999999999999975 234699999999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
+|||++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||
T Consensus 176 ~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG 237 (333)
T 1mqb_A 176 RNILVNSN-------LVCKVSDFGLSRVLEDDPEAT-------YTTSGGKIPIRWTAPEAISY----RKFTSASDVWSFG 237 (333)
T ss_dssp GGEEECTT-------CCEEECCCCC------------------------CCCGGGSCHHHHHS----CCCCHHHHHHHHH
T ss_pred heEEECCC-------CcEEECCCCcchhhccccccc-------cccCCCCccccccCchhccc----CCCCchhhhHHHH
Confidence 99999887 789999999997654321110 01112346889999999976 5688999999999
Q ss_pred HHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1037 CLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1037 viL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|++|+|++ |+.||.+....++...+..+..+..+ ...+..+.+++.+||+.|
T Consensus 238 ~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~ 290 (333)
T 1mqb_A 238 IVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP---------------------------MDCPSAIYQLMMQCWQQE 290 (333)
T ss_dssp HHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC---------------------------TTCBHHHHHHHHHHTCSS
T ss_pred HHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCc---------------------------ccCCHHHHHHHHHHcCCC
Confidence 99999999 99999888877777776554332211 144567999999999999
Q ss_pred CCCCCCHHHHHHHHHhh
Q 001143 1116 PTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~ 1132 (1141)
|.+||++.++++++...
T Consensus 291 p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 291 RARRPKFADIVSILDKL 307 (333)
T ss_dssp TTTSCCHHHHHHHHHHH
T ss_pred hhhCcCHHHHHHHHHHH
Confidence 99999999999998654
No 158
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1e-37 Score=362.97 Aligned_cols=259 Identities=21% Similarity=0.353 Sum_probs=195.9
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~-----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
...+|++.+.||+|+||.||+|++. +..||+|+.+.. ......+. +.+|+.++++++||||+++++++
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~---~~~~~~~~----~~~E~~~l~~l~h~niv~~~~~~ 115 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVG---YTEKQRRD----FLGEASIMGQFDHPNIIRLEGVV 115 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTT---CCHHHHHH----HHHHHHHHTTCCCTTBCCEEEEE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCc---cCHHHHHH----HHHHHHHHHhCCCCCCCeEEEEE
Confidence 3567999999999999999999864 445777764322 12333333 48999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+.... ++||||+++++|.++++. ....+++..+..|+.||+.||.|||++||+||||||+|
T Consensus 116 ~~~~~~--------------~lv~e~~~~~sL~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~N 177 (373)
T 2qol_A 116 TKSKPV--------------MIVTEYMENGSLDSFLRK----HDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARN 177 (373)
T ss_dssp CSSSSC--------------EEEEECCTTCBHHHHHHT----TTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred eeCCce--------------EEEEeCCCCCcHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcce
Confidence 865543 999999999999999975 23469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||+++......... .......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 178 Ill~~~-------~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~SlG~i 239 (373)
T 2qol_A 178 ILINSN-------LVCKVSDFGLGRVLEDDPEAA-------YTTRGGKIPIRWTSPEAIAY----RKFTSASDVWSYGIV 239 (373)
T ss_dssp EEECTT-------CCEEECCC-----------------------------CTTSCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEECcCccccccccCCccc-------eeccCCCcCCCccChhhhcc----CCcCchhcHHHHHHH
Confidence 999887 789999999997654322110 01112235788999999986 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|||++ |+.||......++...+..+.....+ ..++..+.+++.+||+.||.
T Consensus 240 l~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dp~ 292 (373)
T 2qol_A 240 LWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP---------------------------MDCPAALYQLMLDCWQKDRN 292 (373)
T ss_dssp HHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCC---------------------------TTCBHHHHHHHHHHTCSSGG
T ss_pred HHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------ccccHHHHHHHHHHhCcChh
Confidence 999998 99999988877777666543222111 14556799999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001143 1118 ERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~ 1132 (1141)
+||++.++++.+...
T Consensus 293 ~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 293 NRPKFEQIVSILDKL 307 (373)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999988654
No 159
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=5.2e-37 Score=345.52 Aligned_cols=300 Identities=21% Similarity=0.238 Sum_probs=206.4
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|.+. +..+|+|+.... .....+.+ .+|+.++++++||||+++++++.....
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~~~ 82 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT----DPQSVKHA----LREIKIIRRLDHDNIVKVFEILGPSGS 82 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC----SHHHHHHH----HHHHHHHHTCCCTTBCCEEEEECTTSC
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC----ChHHHHHH----HHHHHHHHhcCCCCeeEEEEecccccc
Confidence 57999999999999999999986 566777765422 23333333 799999999999999999999865321
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
....+..........++||||++ ++|.+++.. ..+++..++.++.||+.||+|||++||+||||||+||+++.
T Consensus 83 ~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~ 155 (320)
T 2i6l_A 83 QLTDDVGSLTELNSVYIVQEYME-TDLANVLEQ------GPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT 155 (320)
T ss_dssp BCCC----CCSCSEEEEEEECCS-EEHHHHHTT------CCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET
T ss_pred ccccccccccccCceeEEeeccC-CCHHHHhhc------CCccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC
Confidence 10000001122346799999998 699998854 46899999999999999999999999999999999999974
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
++ +.+||+|||++......... ........+|..|+|||++.+ ...++.++|||||||++|+|+
T Consensus 156 ~~------~~~kl~Dfg~~~~~~~~~~~-------~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il~el~ 219 (320)
T 2i6l_A 156 ED------LVLKIGDFGLARIMDPHYSH-------KGHLSEGLVTKWYRSPRLLLS---PNNYTKAIDMWAAGCIFAEML 219 (320)
T ss_dssp TT------TEEEECCCTTCBCC---------------CCCGGGSCCTTCCHHHHHC---TTCCCHHHHHHHHHHHHHHHH
T ss_pred CC------CeEEEccCccccccCCCccc-------ccccccccccccccCcHHhcC---cccCCchhhhHhHHHHHHHHH
Confidence 32 68999999999765432111 011223457999999999865 246789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCC-C-CCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGS-G-FEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
+|+.||.+....+....+............................ . ..........+.++.+++.+||+.||.+|||
T Consensus 220 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 299 (320)
T 2i6l_A 220 TGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLT 299 (320)
T ss_dssp HSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCC
T ss_pred hCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCC
Confidence 9999999887776666654333222221111110000000000000 0 0001111246778999999999999999999
Q ss_pred HHHHHHHHHhhcCCC
Q 001143 1122 AGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1122 a~ElL~~L~~~~~s~ 1136 (1141)
+.|+++|+|+.....
T Consensus 300 ~~ell~hp~~~~~~~ 314 (320)
T 2i6l_A 300 AEEALSHPYMSIYSF 314 (320)
T ss_dssp HHHHHTSHHHHTTCC
T ss_pred HHHHhCCcccccccC
Confidence 999999999986543
No 160
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1.3e-37 Score=346.27 Aligned_cols=255 Identities=23% Similarity=0.392 Sum_probs=206.2
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+|++.+.||+|+||.||+|.+. +..+|+|+.. .. ....+.+ .+|+.++++++||||+++++++.+.
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~---~~~~~~~----~~E~~~l~~l~h~~i~~~~~~~~~~ 81 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--ED---TMEVEEF----LKEAAVMKEIKHPNLVQLLGVCTRE 81 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEEC--SC---STHHHHH----HHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecC--cC---HHHHHHH----HHHHHHHHhCCCCCEeeEEEEEccC
Confidence 3567999999999999999999996 4556666643 21 1223333 7999999999999999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. .++||||+++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+||++
T Consensus 82 ~~--------------~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~ 144 (288)
T 3kfa_A 82 PP--------------FYIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV 144 (288)
T ss_dssp SS--------------EEEEEECCTTEEHHHHHHH---CCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEE
T ss_pred CC--------------EEEEEEcCCCCcHHHHHHh---cccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEE
Confidence 53 4999999999999999976 334569999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||.+......... ......+|+.|+|||++.+ ..++.++||||||+++|+
T Consensus 145 ~~~-------~~~~l~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 204 (288)
T 3kfa_A 145 GEN-------HLVKVADFGLSRLMTGDTYT---------AHAGAKFPIKWTAPESLAY----NKFSIKSDVWAFGVLLWE 204 (288)
T ss_dssp CGG-------GCEEECCCCGGGTSCSSSSE---------EETTEEECGGGCCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEccCccceeccCCccc---------cccCCccccCcCChhhhcc----CCCCchhhHHHHHHHHHH
Confidence 887 78999999999765432211 1123347889999999986 568899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++ |..||.+....+....+.....+..+ ...++.+.+++.+||..||.+||
T Consensus 205 ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~dp~~Rp 257 (288)
T 3kfa_A 205 IATYGMSPYPGIDLSQVYELLEKDYRMERP---------------------------EGCPEKVYELMRACWQWNPSDRP 257 (288)
T ss_dssp HHTTSCCSSTTCCGGGHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHhCCCCCCCCCCHHHHHHHHhccCCCCCC---------------------------CCCCHHHHHHHHHHhCCChhhCc
Confidence 999 99999887766666665544332211 14556799999999999999999
Q ss_pred CHHHHHHHHHh
Q 001143 1121 TAGDLYEMFVA 1131 (1141)
Q Consensus 1121 Sa~ElL~~L~~ 1131 (1141)
|+.++++.+..
T Consensus 258 s~~~~~~~l~~ 268 (288)
T 3kfa_A 258 SFAEIHQAFET 268 (288)
T ss_dssp CHHHHHHHHHH
T ss_pred CHHHHHHHHHH
Confidence 99999998754
No 161
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.7e-37 Score=350.88 Aligned_cols=264 Identities=21% Similarity=0.213 Sum_probs=200.1
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~ 882 (1141)
.+|++.+.||+|+||.||+|++ .+..||+|+...... .+. +.+|+.+++++ +||||+++++++....
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~----~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 78 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR------APQ----LHLEYRFYKQLGSGDGIPQVYYFGPCGK 78 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS------SCC----HHHHHHHHHHHCSCTTSCCEEEEEEETT
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc------hHH----HHHHHHHHHHhhCCCCCCEEEEEEecCC
Confidence 5799999999999999999997 566788887653321 112 37899999999 8999999999988754
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+ +++|.+++... ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 79 --------------~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~ 139 (330)
T 2izr_A 79 --------------YNAMVLELL-GPSLEDLFDLC----DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIG 139 (330)
T ss_dssp --------------EEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred --------------ccEEEEEeC-CCCHHHHHHHc----CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeec
Confidence 349999999 89999999862 34799999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.++. .....+||+|||+++.+........ ..........||+.|+|||++.+ ..++.++|||||||++|||
T Consensus 140 ~~~~--~~~~~~kl~DFg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el 210 (330)
T 2izr_A 140 RPGN--KTQQVIHIIDFALAKEYIDPETKKH---IPYREHKSLTGTARYMSINTHLG----KEQSRRDDLEALGHMFMYF 210 (330)
T ss_dssp CGGG--TCTTSEEECCCTTCEESBCTTTCCB---CCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHHHHH
T ss_pred cCCC--CCCceEEEEEcccceeeecCCCCcc---ccccccCCcCCCccccChHHHcC----CCCCchhHHHHHHHHHHHH
Confidence 7721 1112399999999987544221110 01112235679999999999986 5688999999999999999
Q ss_pred HhCCCCCCCCC---HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1043 LTLQVPYMGLS---ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1043 LTGk~Pf~~~~---~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
++|+.||.+.. ..+....+.....+..... .....+ ++.+++..||..||.+|
T Consensus 211 l~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~-----------------------~~~~~p-~~~~li~~~l~~~p~~R 266 (330)
T 2izr_A 211 LRGSLPWQGLKADTLKERYQKIGDTKRATPIEV-----------------------LCENFP-EMATYLRYVRRLDFFEK 266 (330)
T ss_dssp HHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHH-----------------------HTTTCH-HHHHHHHHHHHCCTTCC
T ss_pred hcCCCCccccccccHHHHHHHHHhhhccCCHHH-----------------------HhccCh-HHHHHHHHHHhCCCCCC
Confidence 99999998743 3333333322111100000 001234 79999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001143 1120 PTAGDLYEMFVA 1131 (1141)
Q Consensus 1120 PSa~ElL~~L~~ 1131 (1141)
|++++|++.+..
T Consensus 267 P~~~~l~~~l~~ 278 (330)
T 2izr_A 267 PDYDYLRKLFTD 278 (330)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999987753
No 162
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=3.7e-37 Score=347.26 Aligned_cols=267 Identities=22% Similarity=0.304 Sum_probs=198.3
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...+|++.++||+|+||+||+|.+. +..+|+|+. .. ......+.+ .+|+.++++++||||+++++++.+.
T Consensus 8 ~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~--~~--~~~~~~~~~----~~E~~~l~~l~hp~iv~~~~~~~~~ 79 (310)
T 3s95_A 8 RPSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKEL--IR--FDEETQRTF----LKEVKVMRCLEHPNVLKFIGVLYKD 79 (310)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEE--SC--CCHHHHHHH----HHHHHHHTTCCCTTBCCEEEEEEET
T ss_pred ChhHeeccceecCCCCEEEEEEEECCCCcEEEEEEe--cc--CCHHHHHHH----HHHHHHHHhCCCcCcccEEEEEecC
Confidence 3567999999999999999999985 556666654 21 233333444 8999999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+++++|.++++. ....+++.++..|+.||+.||+|||++||+||||||+|||+
T Consensus 80 ~--------------~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~ 141 (310)
T 3s95_A 80 K--------------RLNFITEYIKGGTLRGIIKS----MDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV 141 (310)
T ss_dssp T--------------EEEEEEECCTTCBHHHHHHH----CCTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE
T ss_pred C--------------eeEEEEEecCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE
Confidence 5 34999999999999999976 23469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeecccccccccccccccc----ccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCI----AHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~----~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
+.+ +.+||+|||+++........... ............||+.|+|||++.+ ..++.++|||||||
T Consensus 142 ~~~-------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~ 210 (310)
T 3s95_A 142 REN-------KNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMING----RSYDEKVDVFSFGI 210 (310)
T ss_dssp CTT-------SCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTT----CCCCTHHHHHHHHH
T ss_pred CCC-------CCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcC----CCCCcHHHHHHHHH
Confidence 887 78999999999865432211000 0000001124569999999999976 56889999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1038 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
++|+|++|..||.......... ........... ....+++.+.+++.+||+.||+
T Consensus 211 ~l~el~~g~~~~~~~~~~~~~~------~~~~~~~~~~~-------------------~~~~~~~~l~~li~~~l~~dP~ 265 (310)
T 3s95_A 211 VLCEIIGRVNADPDYLPRTMDF------GLNVRGFLDRY-------------------CPPNCPPSFFPITVRCCDLDPE 265 (310)
T ss_dssp HHHHHHHTCCSSTTTSCBCTTS------SBCHHHHHHHT-------------------CCTTCCTTHHHHHHHHTCSSGG
T ss_pred HHHHHhcCCCCCcchhhhHHHH------hhhhhcccccc-------------------CCCCCCHHHHHHHHHHccCChh
Confidence 9999999999986432110000 00000000000 0013445689999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001143 1118 ERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~ 1132 (1141)
+|||+.++++.+...
T Consensus 266 ~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 266 KRPSFVKLEHWLETL 280 (310)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999987653
No 163
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=3.3e-37 Score=354.41 Aligned_cols=292 Identities=19% Similarity=0.193 Sum_probs=200.0
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+++|++.+.||+|+||.||+|++. +..+|+|+....... .. +..+|+..+..++||||+++++++..
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-----~~----~~~~~~~~l~~l~h~niv~~~~~~~~ 90 (360)
T 3e3p_A 20 KEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-----RN----RELQIMQDLAVLHHPNIVQLQSYFYT 90 (360)
T ss_dssp HHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTTC-----CC----HHHHHHHHHHHHCCTTBCCEEEEEEE
T ss_pred hhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-----cH----HHHHHHHHHHhcCCCCcccHHHhhhc
Confidence 34678999999999999999999985 567888875432111 11 12578888888999999999999876
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--HCCccccCCCCCC
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--SKHIMHRDIKSEN 958 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLH--s~gIvHrDLKP~N 958 (1141)
... ........++||||++ ++|...+..... ....+++..+..++.||+.||.||| ++||+||||||+|
T Consensus 91 ~~~-------~~~~~~~~~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~N 161 (360)
T 3e3p_A 91 LGE-------RDRRDIYLNVVMEYVP-DTLHRCCRNYYR-RQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHN 161 (360)
T ss_dssp ECS-------SCTTCEEEEEEEECCS-CBHHHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGG
T ss_pred ccc-------ccccceeEEEEeeccc-ccHHHHHHHHhh-cccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHH
Confidence 332 1112335789999998 566666654322 3457899999999999999999999 9999999999999
Q ss_pred eeeec-ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 959 ILIDL-ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 959 ILld~-~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
||++. + +.+||+|||++....... ......||+.|+|||++.+ ...++.++|||||||
T Consensus 162 Ill~~~~-------~~~kl~Dfg~a~~~~~~~-----------~~~~~~gt~~y~aPE~~~~---~~~~~~~~Di~slG~ 220 (360)
T 3e3p_A 162 VLVNEAD-------GTLKLCDFGSAKKLSPSE-----------PNVAYICSRYYRAPELIFG---NQHYTTAVDIWSVGC 220 (360)
T ss_dssp EEEETTT-------TEEEECCCTTCBCCCTTS-----------CCCSTTSCGGGCCHHHHTT---CSSCCTHHHHHHHHH
T ss_pred EEEeCCC-------CcEEEeeCCCceecCCCC-----------CcccccCCcceeCHHHHcC---CCCCCcHHHHHHHHH
Confidence 99986 5 789999999997654321 1123468999999999865 235789999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCc-cccccccCCCCCC----chhhhhhHHHHHHHHHHhc
Q 001143 1038 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH-EHEVAQSGSGFEK----PEAELETLSFLVDVFRRCT 1112 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~L~dLI~~cL 1112 (1141)
++|+|++|+.||.+.+..+....+...........+....... ...... ...... +......+.++.+||.+||
T Consensus 221 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~li~~~L 299 (360)
T 3e3p_A 221 IFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYN-SKGIPWSNVFSDHSLKDAKEAYDLLSALL 299 (360)
T ss_dssp HHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGC-CCCCCHHHHTTTCCCTTHHHHHHHHHHHT
T ss_pred HHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccc-cccCCcccccchhhccccHHHHHHHHHHh
Confidence 9999999999999887777666553322222111111110000 000000 000000 0011135788999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhcC
Q 001143 1113 EENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1113 ~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
+.||.+|||+.|+++|+|+...
T Consensus 300 ~~dP~~Rpt~~e~l~hp~f~~~ 321 (360)
T 3e3p_A 300 QYLPEERMKPYEALCHPYFDEL 321 (360)
T ss_dssp CSSGGGSCCHHHHTTSGGGGGG
T ss_pred ccCccccCCHHHHhcCcccccc
Confidence 9999999999999999999754
No 164
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.7e-37 Score=343.80 Aligned_cols=267 Identities=21% Similarity=0.308 Sum_probs=202.9
Q ss_pred CCCCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 800 LDPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 800 ~~~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
.+.....+|++.+.||+|+||.||+|++ .+..+|+|+............. .....+.+|+.++++++||||++++++
T Consensus 13 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~ 91 (287)
T 4f0f_A 13 LPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMI-EKFQEFQREVFIMSNLNHPNIVKLYGL 91 (287)
T ss_dssp CCBCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHH-CCSHHHHHHHHHHTTCCCTTBCCEEEE
T ss_pred hhhhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHH-HHHHHHHHHHHHHHhCCCCCchhhhee
Confidence 3445567899999999999999999998 4667888875443322222211 111345899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIK 955 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g--IvHrDLK 955 (1141)
+.+.. ++||||+++++|.+++.. ....+++..++.++.||+.||.|||++| |+|||||
T Consensus 92 ~~~~~----------------~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dik 151 (287)
T 4f0f_A 92 MHNPP----------------RMVMEFVPCGDLYHRLLD----KAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLR 151 (287)
T ss_dssp ETTTT----------------EEEEECCTTCBHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCS
T ss_pred ecCCC----------------eEEEEecCCCCHHHHHhc----ccCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCC
Confidence 86432 799999999999998864 2347999999999999999999999999 9999999
Q ss_pred CCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHH
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSY 1035 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSL 1035 (1141)
|+|||++.++. .....+||+|||+++..... .....||+.|+|||++.+. ...++.++|||||
T Consensus 152 p~Nil~~~~~~--~~~~~~kl~Dfg~~~~~~~~-------------~~~~~g~~~y~aPE~~~~~--~~~~~~~~Di~sl 214 (287)
T 4f0f_A 152 SPNIFLQSLDE--NAPVCAKVADFGLSQQSVHS-------------VSGLLGNFQWMAPETIGAE--EESYTEKADTYSF 214 (287)
T ss_dssp GGGEEESCCCT--TCSCCEEECCCTTCBCCSSC-------------EECCCCCCTTSCGGGSSCS--SCEECHHHHHHHH
T ss_pred cceEEEeccCC--CCceeEEeCCCCcccccccc-------------ccccCCCccccCchhhccC--CCCcCchhhHHHH
Confidence 99999987621 12234999999998643321 1234689999999998431 2457899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHHH--HHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001143 1036 GCLLLELLTLQVPYMGLSELE--IHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1112 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~~~~~e--l~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL 1112 (1141)
||++|+|++|+.||......+ ....+.. ...+..+ ...++.+.+++.+||
T Consensus 215 G~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l 267 (287)
T 4f0f_A 215 AMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIP---------------------------EDCPPRLRNVIELCW 267 (287)
T ss_dssp HHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCC---------------------------TTSCHHHHHHHHHHT
T ss_pred HHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCC---------------------------cccCHHHHHHHHHHh
Confidence 999999999999997654332 2333322 2111111 145667999999999
Q ss_pred ccCCCCCCCHHHHHHHHHh
Q 001143 1113 EENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1113 ~~DP~~RPSa~ElL~~L~~ 1131 (1141)
+.||.+|||+.|+++.+..
T Consensus 268 ~~dp~~Rps~~~ll~~L~~ 286 (287)
T 4f0f_A 268 SGDPKKRPHFSYIVKELSE 286 (287)
T ss_dssp CSSGGGSCCHHHHHHHHHT
T ss_pred cCChhhCcCHHHHHHHHHh
Confidence 9999999999999998753
No 165
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=5.5e-38 Score=357.70 Aligned_cols=261 Identities=20% Similarity=0.247 Sum_probs=204.2
Q ss_pred CceEe-eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCC
Q 001143 807 SLSSC-DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 882 (1141)
Q Consensus 807 ~y~i~-~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~ 882 (1141)
.|.+. +.||+|+||.||+|.+. +..+|+|+...... ....... +.+|+.++.++. ||||+++++++.+..
T Consensus 29 ~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~----~~~e~~~l~~l~~~~~iv~~~~~~~~~~ 102 (327)
T 3lm5_A 29 FYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRR--GQDCRAE----ILHEIAVLELAKSCPRVINLHEVYENTS 102 (327)
T ss_dssp HEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEET--TEECHHH----HHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred EEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhc--chHHHHH----HHHHHHHHHhccCCCCEEEEEEEEEeCC
Confidence 36676 89999999999999985 67788887654321 2222223 379999999995 799999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. .....+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 103 --------------~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~ 165 (327)
T 3lm5_A 103 --------------EIILILEYAAGGEIFSLCLP---ELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165 (327)
T ss_dssp --------------EEEEEEECCTTEEGGGGGSS---CC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEES
T ss_pred --------------eEEEEEEecCCCcHHHHHHH---hcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEe
Confidence 35999999999999988753 2335799999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
... ..+.+||+|||+++....... .....||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 166 ~~~----~~~~~kL~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~~l 226 (327)
T 3lm5_A 166 SIY----PLGDIKIVDFGMSRKIGHACE-----------LREIMGTPEYLAPEILNY----DPITTATDMWNIGIIAYML 226 (327)
T ss_dssp CBT----TBCCEEECCGGGCEEC--------------------CCCGGGCCHHHHTT----CCCCTHHHHHHHHHHHHHH
T ss_pred cCC----CCCcEEEeeCccccccCCccc-----------cccccCCcCccCCeeecC----CCCCchhhHHHHHHHHHHH
Confidence 721 117899999999976543211 123469999999999976 5688999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|+.||.+....+....+.......... .....+..+.++|.+||+.||.+|||+
T Consensus 227 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~------------------------~~~~~~~~~~~li~~~L~~dP~~Rpt~ 282 (327)
T 3lm5_A 227 LTHTSPFVGEDNQETYLNISQVNVDYSEE------------------------TFSSVSQLATDFIQSLLVKNPEKRPTA 282 (327)
T ss_dssp HHSSCSSCCSSHHHHHHHHHHTCCCCCTT------------------------TTTTSCHHHHHHHHHHSCSSGGGSCCH
T ss_pred HhCCCCCCCCCchHHHHHHHhcccccCch------------------------hhcccCHHHHHHHHHHcCCChhhCcCH
Confidence 99999999887777666654433221110 001456679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
+|+++|+|++.
T Consensus 283 ~~ll~h~~~~~ 293 (327)
T 3lm5_A 283 EICLSHSWLQQ 293 (327)
T ss_dssp HHHTTCGGGCC
T ss_pred HHHhCCHhhcc
Confidence 99999999964
No 166
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.8e-37 Score=347.39 Aligned_cols=263 Identities=24% Similarity=0.369 Sum_probs=204.7
Q ss_pred CCCCceEeeeecccCceEEEEEEE-------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 875 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~-------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkll 875 (1141)
...+|++.+.||+|+||.||+|++ .+..+|+|+.... ......+. +.+|+.+++++ +||||++++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~h~~i~~~~ 93 (313)
T 1t46_A 21 PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS---AHLTEREA----LMSELKVLSYLGNHMNIVNLL 93 (313)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCEE
T ss_pred ChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc---hhHHHHHH----HHHHHHHHhhcccCCCeeeEE
Confidence 346799999999999999999986 2356777775422 22233333 48999999999 899999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-------------cCCCCCCHHHHHHHHHHHHHHHH
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-------------TGEKHVSVKLALFIAQDVAAALV 942 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-------------~~~~~Ls~~~i~~Ia~QIa~gL~ 942 (1141)
+++...+.. ++||||+++++|.+++..... .....+++..++.++.||+.||.
T Consensus 94 ~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~ 159 (313)
T 1t46_A 94 GACTIGGPT--------------LVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMA 159 (313)
T ss_dssp EEECSSSSC--------------EEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHH
T ss_pred EEEecCCCc--------------EEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 999875543 999999999999999986321 11235899999999999999999
Q ss_pred HHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC
Q 001143 943 ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK 1022 (1141)
Q Consensus 943 yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 1022 (1141)
|||++||+||||||+||+++.+ +.+||+|||++......... .......+|+.|+|||++.+
T Consensus 160 ~lH~~~i~H~dlkp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~--- 221 (313)
T 1t46_A 160 FLASKNCIHRDLAARNILLTHG-------RITKICDFGLARDIKNDSNY--------VVKGNARLPVKWMAPESIFN--- 221 (313)
T ss_dssp HHHHTTCCCSCCSGGGEEEETT-------TEEEECCCGGGSCTTSCTTS--------EECSSSEECGGGCCHHHHHH---
T ss_pred HHHHCCeecCCCccceEEEcCC-------CCEEEccccccccccccccc--------eeccCCCCcceeeChHHhcC---
Confidence 9999999999999999999887 78999999999765432211 01123457889999999876
Q ss_pred CCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHH-HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhh
Q 001143 1023 PNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELE-IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET 1100 (1141)
Q Consensus 1023 ~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~e-l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1100 (1141)
..++.++||||||+++|+|++ |..||.+..... ....+.....+..+ ...
T Consensus 222 -~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~ 273 (313)
T 1t46_A 222 -CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSP---------------------------EHA 273 (313)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCC---------------------------TTS
T ss_pred -CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhccCCCCCCc---------------------------ccC
Confidence 568899999999999999999 999998755433 33333332221111 144
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1101 LSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1101 ~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
+..+.+++.+||+.||.+|||+.|+++++....
T Consensus 274 ~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 274 PAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 567999999999999999999999999987654
No 167
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=2.2e-37 Score=373.40 Aligned_cols=256 Identities=23% Similarity=0.401 Sum_probs=207.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.++||+|+||.||+|.+. +..||+|+ ++.... ..+.+ .+|+.+|++++|||||++++++....
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~--~~~~~~---~~~~~----~~E~~~l~~l~hpniv~l~~~~~~~~ 289 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTM---EVEEF----LKEAAVMKEIKHPNLVQLLGVCTREP 289 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEE--CCSSSS---CHHHH----HHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEE--ecCccc---chHHH----HHHHHHHHhcCCCCEeeEEEEEecCC
Confidence 456999999999999999999996 45566665 333221 22333 79999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.+ ++||||+++|+|.++++. .....+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 290 ~~--------------~lv~E~~~~g~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~ 352 (495)
T 1opk_A 290 PF--------------YIITEFMTYGNLLDYLRE---CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG 352 (495)
T ss_dssp SC--------------EEEEECCTTCBHHHHHHH---SCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred cE--------------EEEEEccCCCCHHHHHHh---cCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC
Confidence 43 999999999999999976 2334699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++........ ......+++.|+|||++.+ ..++.++|||||||++|||
T Consensus 353 ~~-------~~~kl~DFG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwSlG~~l~el 412 (495)
T 1opk_A 353 EN-------HLVKVADFGLSRLMTGDTYT---------AHAGAKFPIKWTAPESLAY----NKFSIKSDVWAFGVLLWEI 412 (495)
T ss_dssp GG-------GCEEECCTTCEECCTTCCEE---------CCTTCCCCGGGCCHHHHHH----CEECHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEeecccceeccCCcee---------ecCCCcCCcceeCHhHHhc----CCCCcHHhHHhHHHHHHHH
Confidence 87 78999999999865432111 1123346789999999986 5678999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |..||.+.+..++...+..+.....+ ..+++.+.+||.+||+.||.+|||
T Consensus 413 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~cl~~dP~~RPs 465 (495)
T 1opk_A 413 ATYGMSPYPGIDLSQVYELLEKDYRMERP---------------------------EGCPEKVYELMRACWQWNPSDRPS 465 (495)
T ss_dssp HTTSCCSSTTCCGGGHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcCcChhHCcC
Confidence 99 99999987776666666544332211 145667999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001143 1122 AGDLYEMFVART 1133 (1141)
Q Consensus 1122 a~ElL~~L~~~~ 1133 (1141)
+.+|++.+....
T Consensus 466 ~~el~~~L~~~~ 477 (495)
T 1opk_A 466 FAEIHQAFETMF 477 (495)
T ss_dssp HHHHHHHHHTSC
T ss_pred HHHHHHHHHHHH
Confidence 999999887653
No 168
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-37 Score=355.70 Aligned_cols=264 Identities=25% Similarity=0.341 Sum_probs=202.8
Q ss_pred CCCCceEeeeecccCceEEEEEEE-------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF-------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 875 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~-------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkll 875 (1141)
...+|++.+.||+|+||.||+|.+ .+..+|+|+..... ..... ..+.+|+.+++++ +||||++++
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~----~~~~~E~~~l~~l~~hp~iv~~~ 115 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA---DSSER----EALMSELKMMTQLGSHENIVNLL 115 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC---------C----HHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc---CHHHH----HHHHHHHHHHHhhcCCCCeeeEE
Confidence 456899999999999999999997 23357777754221 11222 2348999999999 899999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc------------------CCCCCCHHHHHHHHHHH
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET------------------GEKHVSVKLALFIAQDV 937 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~------------------~~~~Ls~~~i~~Ia~QI 937 (1141)
+++...+.. ++||||+++|+|.+++...... ....+++..++.|+.||
T Consensus 116 ~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi 181 (344)
T 1rjb_A 116 GACTLSGPI--------------YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQV 181 (344)
T ss_dssp EEECSSSSC--------------EEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHH
T ss_pred EEEeeCCcc--------------EEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHH
Confidence 999875543 9999999999999999763210 01348999999999999
Q ss_pred HHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhh
Q 001143 938 AAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVL 1017 (1141)
Q Consensus 938 a~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 1017 (1141)
+.||.|||++||+||||||+|||++.+ +.+||+|||++......... .......||+.|+|||++
T Consensus 182 ~~aL~~LH~~~ivH~Dikp~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~~t~~y~aPE~~ 246 (344)
T 1rjb_A 182 AKGMEFLEFKSCVHRDLAARNVLVTHG-------KVVKICDFGLARDIMSDSNY--------VVRGNARLPVKWMAPESL 246 (344)
T ss_dssp HHHHHHHHHTTEEETTCSGGGEEEETT-------TEEEECCCGGGSCGGGCTTS--------EEETTEEECGGGCCHHHH
T ss_pred HHHHHHHHhCCcccCCCChhhEEEcCC-------CcEEeCCCccCcccccCccc--------eeccCccCccCccCHHHh
Confidence 999999999999999999999999987 78999999999765432211 011234578899999999
Q ss_pred ccccCCCCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHH-HHHHHhCCCCCchhHHhhhccCccccccccCCCCCCch
Q 001143 1018 RAMHKPNLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEI-HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPE 1095 (1141)
Q Consensus 1018 ~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el-~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 1095 (1141)
.+ ..++.++|||||||++|+|+| |..||.+...... ...+..+..+..+
T Consensus 247 ~~----~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~------------------------- 297 (344)
T 1rjb_A 247 FE----GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQP------------------------- 297 (344)
T ss_dssp HH----CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCC-------------------------
T ss_pred cc----CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCCCCCC-------------------------
Confidence 76 568899999999999999998 9999987654333 3333333222111
Q ss_pred hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1096 AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1096 ~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
...++.+.+++.+||..||.+|||+.++++++.....
T Consensus 298 --~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 298 --FYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp --TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred --CCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 1345679999999999999999999999999987643
No 169
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=3.7e-37 Score=353.00 Aligned_cols=297 Identities=20% Similarity=0.224 Sum_probs=207.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..+|++.+.||+|+||.||+|.+. +..+|+|+.. . ......... +.+|+.++++++||||+++++++....
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~-~~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~ 82 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIE--P-FDKPLFALR----TLREIKILKHFKHENIITIFNIQRPDS 82 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC--C-CSSHHHHHH----HHHHHHHHHHCCCTTBCCEEEECCCSC
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeec--c-cccchHHHH----HHHHHHHHHhCcCCCcCCeeeeecccc
Confidence 467999999999999999999986 5667777653 2 122222233 479999999999999999999876532
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. .....++||||+. ++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 83 ~~---------~~~~~~lv~e~~~-~~L~~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~ 146 (353)
T 2b9h_A 83 FE---------NFNEVYIIQELMQ-TDLHRVIST------QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN 146 (353)
T ss_dssp ST---------TCCCEEEEECCCS-EEHHHHHHH------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred cC---------ccceEEEEEeccC-ccHHHHHhh------cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc
Confidence 11 1235699999997 799999875 3699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++........................||+.|+|||++.+ ...++.++|||||||++|+|
T Consensus 147 ~~-------~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~Di~slG~il~~l 216 (353)
T 2b9h_A 147 SN-------CDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLT---SAKYSRAMDVWSCGCILAEL 216 (353)
T ss_dssp TT-------CCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHS---CCCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEEecccccccccccccccCccccccchhhccccccccCCeeecc---CCCccchhhHHHHHHHHHHH
Confidence 87 789999999998765322111000000111223468999999998764 24678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHH-hCCCCCchhHHhhhccCccccccccCCCC---CCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGF---EKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~-~~~~p~l~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
++|+.||.+.+..+....+. ....+........................ .........++++.+||.+||+.||.+
T Consensus 217 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~ 296 (353)
T 2b9h_A 217 FLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAK 296 (353)
T ss_dssp HHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGG
T ss_pred HhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCccc
Confidence 99999999877665544442 11111111000000000000000000000 001111256778999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
|||+.|+++|+|+...
T Consensus 297 Rpt~~ell~hp~~~~~ 312 (353)
T 2b9h_A 297 RITAKEALEHPYLQTY 312 (353)
T ss_dssp SCCHHHHHTSGGGTTT
T ss_pred CCCHHHHhcCcccccc
Confidence 9999999999999754
No 170
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=3.6e-37 Score=344.73 Aligned_cols=263 Identities=22% Similarity=0.339 Sum_probs=201.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~---~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
...|++.++||+|+||+||+|.+. +..++++++.+... ......+.+ .+|+.++++++||||+++++++.+.
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~-~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~ 98 (298)
T 3f66_A 24 SLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQF----LTEGIIMKDFSHPNVLSLLGICLRS 98 (298)
T ss_dssp GEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTC-CSHHHHHHH----HHHHHHHHTCCCTTBCCCCEEECCS
T ss_pred ceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccC-CCHHHHHHH----HHHHHHHHhCCCCCEeeeeeEEEcC
Confidence 346899999999999999999863 33344444444432 223333334 7999999999999999999986543
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. ..++||||+++++|.++++. ....+++..+..|+.||+.||.|||++||+||||||+||++
T Consensus 99 ~~-------------~~~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~ 161 (298)
T 3f66_A 99 EG-------------SPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML 161 (298)
T ss_dssp SS-------------CCEEEEECCTTCBHHHHHHC----TTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CC-------------ceEEEEeCCCCCCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE
Confidence 21 24899999999999999974 23468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+++......... ........+|+.|+|||.+.+ ..++.++||||||+++|+
T Consensus 162 ~~~-------~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 224 (298)
T 3f66_A 162 DEK-------FTVKVADFGLARDMYDKEYYS------VHNKTGAKLPVKWMALESLQT----QKFTTKSDVWSFGVLLWE 224 (298)
T ss_dssp CTT-------CCEEECSCGGGCCCSCGGGCB------C-----CCBCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred CCC-------CCEEECcccccccccccchhc------cccccCCCCCccccChHHhcC----CCCChHHHHHHHHHHHHH
Confidence 887 789999999997654422111 111223457889999999976 568899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++ |.+||......+....+..+..+..+. ..++.+.+++.+||+.||.+||
T Consensus 225 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rp 277 (298)
T 3f66_A 225 LMTRGAPPYPDVNTFDITVYLLQGRRLLQPE---------------------------YCPDPLYEVMLKCWHPKAEMRP 277 (298)
T ss_dssp HHTTSCCSSTTSCTTTHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHhCCCCCCccCCHHHHHHHHhcCCCCCCCc---------------------------cCCHHHHHHHHHHcCCChhhCc
Confidence 999 677777666555555554443322111 3456799999999999999999
Q ss_pred CHHHHHHHHHhhc
Q 001143 1121 TAGDLYEMFVART 1133 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~ 1133 (1141)
|+.|+++.+....
T Consensus 278 s~~ell~~L~~~~ 290 (298)
T 3f66_A 278 SFSELVSRISAIF 290 (298)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999887653
No 171
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=4.1e-37 Score=349.37 Aligned_cols=282 Identities=20% Similarity=0.233 Sum_probs=202.6
Q ss_pred CCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeE
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHK 878 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~ 878 (1141)
....++|++.++||+|+||.||+|.+ .+..+|+|+.... . .+. +.+|+.++++++ ||||+++++++
T Consensus 32 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~---~~~----~~~E~~~l~~l~~~~~i~~~~~~~ 100 (330)
T 3nsz_A 32 WGNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----K---KKK----IKREIKILENLRGGPNIITLADIV 100 (330)
T ss_dssp CEEGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----C---HHH----HHHHHHHHHHHTTSTTBCCEEEEE
T ss_pred ccCCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----c---hHH----HHHHHHHHHHcCCCCCEEEeeeee
Confidence 33456799999999999999999987 4667888875311 1 122 379999999997 99999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.+... ...++||||+++++|.++++. +++..++.++.||+.||+|||++||+||||||+|
T Consensus 101 ~~~~~------------~~~~lv~e~~~~~~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~N 160 (330)
T 3nsz_A 101 KDPVS------------RTPALVFEHVNNTDFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHN 160 (330)
T ss_dssp ECTTT------------CCEEEEEECCCCCCHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGG
T ss_pred ccCCC------------CceEEEEeccCchhHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHH
Confidence 86321 245999999999999988743 8999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.++ ..+||+|||+++...... ......||+.|+|||++.+ ...++.++|||||||+
T Consensus 161 il~~~~~------~~~kl~Dfg~a~~~~~~~-----------~~~~~~~~~~y~aPE~~~~---~~~~~~~~DiwslG~i 220 (330)
T 3nsz_A 161 VMIDHEH------RKLRLIDWGLAEFYHPGQ-----------EYNVRVASRYFKGPELLVD---YQMYDYSLDMWSLGCM 220 (330)
T ss_dssp EEEETTT------TEEEECCCTTCEECCTTC-----------CCCSCCSCGGGCCHHHHTT---CCCCCTHHHHHHHHHH
T ss_pred EEEcCCC------CEEEEEeCCCceEcCCCC-----------ccccccccccccChhhhcC---CCcCCchhhHHHHHHH
Confidence 9998662 389999999997654321 1123468999999999875 2467899999999999
Q ss_pred HHHHHhCCCCCCCC-CHHHHHHHH-HhCCCCCchhHHhhhccCcc--------ccccccCCCCCCchhhhhhHHHHHHHH
Q 001143 1039 LLELLTLQVPYMGL-SELEIHDLI-QMGKRPRLTDELEALGSCHE--------HEVAQSGSGFEKPEAELETLSFLVDVF 1108 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~-~~~el~~~I-~~~~~p~l~~~l~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~L~dLI 1108 (1141)
+|+|++|+.||... ...+....+ .....+.............. ...................++++.+||
T Consensus 221 l~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 300 (330)
T 3nsz_A 221 LASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFL 300 (330)
T ss_dssp HHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHH
T ss_pred HHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHH
Confidence 99999999999542 332222222 11111000000000000000 000000000001111224678899999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1109 RRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1109 ~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.+||++||.+|||++|+++|+||...
T Consensus 301 ~~~L~~dP~~Rpta~e~l~hp~f~~~ 326 (330)
T 3nsz_A 301 DKLLRYDHQSRLTAREAMEHPYFYTV 326 (330)
T ss_dssp HTTSCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHhcCCcccCCCHHHHhcCccHhhh
Confidence 99999999999999999999999854
No 172
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=352.88 Aligned_cols=260 Identities=19% Similarity=0.322 Sum_probs=199.6
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEE--EecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKV--RTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI--~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
....+|++.++||+|+||.||+|.+. +..+++|+ +.+.... .....+. +.+|+.++++++||||+++++++
T Consensus 12 l~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~-~~~~~~~----~~~E~~~l~~l~hp~iv~~~~~~ 86 (327)
T 3lzb_A 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT-SPKANKE----ILDEAYVMASVDNPHVCRLLGIC 86 (327)
T ss_dssp CCTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCS-SCCCHHH----HHHHHHHHTTCCBTTBCCCCEEE
T ss_pred cCHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeecccc-CHHHHHH----HHHHHHHHHhCCCCCeeEEEEEE
Confidence 34578999999999999999999984 34443332 2222111 1112223 47999999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.... .++||||+++++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+|
T Consensus 87 ~~~~---------------~~~v~~~~~~g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N 147 (327)
T 3lzb_A 87 LTST---------------VQLITQLMPFGCLLDYVREH----KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARN 147 (327)
T ss_dssp ESSS---------------EEEEECCCSSCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGG
T ss_pred ecCC---------------ceEEEEecCCCcHHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHH
Confidence 7543 38999999999999999762 3469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||+++........ .......+|+.|+|||++.+ ..++.++|||||||+
T Consensus 148 Il~~~~-------~~~kL~DfG~a~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~i 208 (327)
T 3lzb_A 148 VLVKTP-------QHVKITDFGLAKLLGAEEKE--------YHAEGGKVPIKWMALESILH----RIYTHQSDVWSYGVT 208 (327)
T ss_dssp EEEEET-------TEEEECCTTC------------------------CCCGGGSCHHHHHH----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEccCcceeEccCcccc--------ccccCCCccccccCHHHHcC----CCCChHHHHHHHHHH
Confidence 999887 78999999999765432211 11123347889999999987 568899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|+|++ |..||.+....++...+..+.....+. ..+..+.+++.+||+.||.
T Consensus 209 l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~ 261 (327)
T 3lzb_A 209 VWELMTFGSKPYDGIPASEISSILEKGERLPQPP---------------------------ICTIDVYMIMRKCWMIDAD 261 (327)
T ss_dssp HHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT---------------------------TBCHHHHHHHHHHTCSSGG
T ss_pred HHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cCCHHHHHHHHHHcCCChh
Confidence 999999 999999877776666665544332211 3456799999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001143 1118 ERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~ 1132 (1141)
+|||+.|+++.+...
T Consensus 262 ~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 262 SRPKFRELIIEFSKM 276 (327)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred HCcCHHHHHHHHHHH
Confidence 999999999988764
No 173
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.2e-37 Score=348.85 Aligned_cols=264 Identities=28% Similarity=0.437 Sum_probs=206.1
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
..+.|++.+.||+|+||.||+|.+. +..+++|+.... .....+. +.+|+.++++++||||+++++++...
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~----~~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~ 88 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETK----SEEELED----YIVEIEILATCDHPYIVKLLGAYYHD 88 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC--------CCHHH----HHHHHHHHHHCCCTTBCCEEEEEECC
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCC----CHHHHHH----HHHHHHHHhcCCCCCEeeeeeeeeeC
Confidence 3467999999999999999999995 566777775422 1112233 37899999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 89 ~--------------~~~lv~e~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~ 150 (302)
T 2j7t_A 89 G--------------KLWIMIEFCPGGAVDAIMLEL----DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM 150 (302)
T ss_dssp ---------------CEEEEEECCTTEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE
T ss_pred C--------------eEEEEEEeCCCCcHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE
Confidence 4 349999999999999998752 2469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGviL~ 1040 (1141)
+.+ +.+||+|||++........ ......||+.|+|||++.... ....++.++||||||+++|
T Consensus 151 ~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~ 213 (302)
T 2j7t_A 151 TLE-------GDIRLADFGVSAKNLKTLQ----------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI 213 (302)
T ss_dssp CTT-------SCEEECCCHHHHHHHHHHH----------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHH
T ss_pred CCC-------CCEEEEECCCCcccccccc----------ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHH
Confidence 877 7899999998754322110 112346899999999985211 1256789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|+.||...+.......+.....+.... ....+..+.+++.+||+.||.+||
T Consensus 214 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~l~~li~~~l~~dp~~Rp 268 (302)
T 2j7t_A 214 EMAQIEPPHHELNPMRVLLKIAKSDPPTLLT-------------------------PSKWSVEFRDFLKIALDKNPETRP 268 (302)
T ss_dssp HHHHSSCTTTTSCHHHHHHHHHHSCCCCCSS-------------------------GGGSCHHHHHHHHHHSCSCTTTSC
T ss_pred HHhcCCCCCccCCHHHHHHHHhccCCcccCC-------------------------ccccCHHHHHHHHHHcccChhhCC
Confidence 9999999999877766665554443322110 114556799999999999999999
Q ss_pred CHHHHHHHHHhhcCC
Q 001143 1121 TAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~s 1135 (1141)
|+.++++|+|+....
T Consensus 269 s~~~ll~h~~~~~~~ 283 (302)
T 2j7t_A 269 SAAQLLEHPFVSSIT 283 (302)
T ss_dssp CHHHHTTSTTTTTCC
T ss_pred CHHHHhcChHHhhhc
Confidence 999999999997543
No 174
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.3e-38 Score=360.56 Aligned_cols=251 Identities=22% Similarity=0.266 Sum_probs=198.5
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCCh----HHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSA----DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~----~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
.+|++.+.||+|+||.||+|.+ .+..||+|+.......... ...+. +.+|+.++++++||||+++++++.
T Consensus 24 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~----~~~E~~~l~~l~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 24 QKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGK----VTLEIAILSRVEHANIIKVLDIFE 99 (335)
T ss_dssp HHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEE----EEHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHH----HHHHHHHHHhCCCCCEeeEEEEEe
Confidence 4699999999999999999987 4566888876543221110 11222 368999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCC-CHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGG-SVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~gg-SL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
+.+ ..++||||+.+| +|.+++.. ...+++..+..|+.||+.||.|||++||+||||||+|
T Consensus 100 ~~~--------------~~~lv~e~~~~g~~l~~~~~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~N 160 (335)
T 3dls_A 100 NQG--------------FFQLVMEKHGSGLDLFAFIDR-----HPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDEN 160 (335)
T ss_dssp CSS--------------EEEEEEECCTTSCBHHHHHHT-----CCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGG
T ss_pred eCC--------------EEEEEEEeCCCCccHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHH
Confidence 655 349999999766 99999875 3469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||++........ .....||+.|+|||++.+ ...++.++|||||||+
T Consensus 161 Ill~~~-------~~~kL~Dfg~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwslG~i 219 (335)
T 3dls_A 161 IVIAED-------FTIKLIDFGSAAYLERGKL-----------FYTFCGTIEYCAPEVLMG---NPYRGPELEMWSLGVT 219 (335)
T ss_dssp EEECTT-------SCEEECCCTTCEECCTTCC-----------BCEECSCGGGCCHHHHTT---CCBCSHHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEeecccceECCCCCc-----------eeccCCCccccChhhhcC---CCCCCCcccchhHHHH
Confidence 999887 7899999999976543211 123468999999999976 1234789999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|+|++|..||..... .+.... .. ....++++.+||.+||+.||.+
T Consensus 220 l~el~~g~~pf~~~~~-----~~~~~~--------------------------~~---~~~~~~~l~~li~~~L~~dP~~ 265 (335)
T 3dls_A 220 LYTLVFEENPFCELEE-----TVEAAI--------------------------HP---PYLVSKELMSLVSGLLQPVPER 265 (335)
T ss_dssp HHHHHHSSCSCSSGGG-----GTTTCC--------------------------CC---SSCCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHhCCCchhhHHH-----HHhhcc--------------------------CC---CcccCHHHHHHHHHHccCChhh
Confidence 9999999999975211 000000 00 0134567999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
|||+.++++|+|+...
T Consensus 266 Rps~~ell~hp~~~~~ 281 (335)
T 3dls_A 266 RTTLEKLVTDPWVTQP 281 (335)
T ss_dssp SCCHHHHHHCTTTTCC
T ss_pred CcCHHHHhcCccccCC
Confidence 9999999999998653
No 175
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.1e-37 Score=345.87 Aligned_cols=253 Identities=23% Similarity=0.352 Sum_probs=200.6
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
....+|++.+.||+|+||.||+|.+.+..+|+|+.... ...+. +.+|+.++++++||||+++++++.+..
T Consensus 18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~------~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~~ 87 (278)
T 1byg_A 18 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND------ATAQA----FLAEASVMTQLRHSNLVQLLGVIVEEK 87 (278)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC------C--HH----HHHTHHHHTTCCCTTBCCEEEEECCC-
T ss_pred CChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecch------hHHHH----HHHHHHHHHhCCCCCEeeEEEEEEcCC
Confidence 45678999999999999999999999999999985421 12223 378999999999999999999875432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. ..++||||+++++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 88 ~-------------~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~ 151 (278)
T 1byg_A 88 G-------------GLYIVTEYMAKGSLVDYLRSRG---RSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS 151 (278)
T ss_dssp --------------CCEEEECCCTTEEHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred C-------------ceEEEEecCCCCCHHHHHHhcc---cccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe
Confidence 1 2499999999999999997631 22489999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||++....... ....+++.|+|||++.+ ..++.++||||||+++|+|
T Consensus 152 ~~-------~~~~l~Dfg~~~~~~~~~-------------~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~l 207 (278)
T 1byg_A 152 ED-------NVAKVSDFGLTKEASSTQ-------------DTGKLPVKWTAPEALRE----KKFSTKSDVWSFGILLWEI 207 (278)
T ss_dssp TT-------SCEEECCCCC-------------------------CCTTTSCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEeeccccccccccc-------------cCCCccccccCHHHhCC----CCCCchhcHHHHHHHHHHH
Confidence 87 789999999987543211 12347889999999976 5678999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |..||......+....+..+..+..+ ...++.+.+++.+||+.||.+|||
T Consensus 208 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~p~~Rps 260 (278)
T 1byg_A 208 YSFGRVPYPRIPLKDVVPRVEKGYKMDAP---------------------------DGCPPAVYEVMKNCWHLDAAMRPS 260 (278)
T ss_dssp HTTSCCSCTTSCGGGHHHHHTTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHhcCCCCCCc---------------------------ccCCHHHHHHHHHHhcCChhhCCC
Confidence 98 99999877666666555443322211 145667999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001143 1122 AGDLYEMFVAR 1132 (1141)
Q Consensus 1122 a~ElL~~L~~~ 1132 (1141)
+.|+++.+...
T Consensus 261 ~~~l~~~L~~i 271 (278)
T 1byg_A 261 FLQLREQLEHI 271 (278)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988664
No 176
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=2.1e-37 Score=376.39 Aligned_cols=263 Identities=21% Similarity=0.286 Sum_probs=209.0
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
....++|++.++||+|+||.||+|++. +..+|+|+..... .........+.+|+.++++++||||+++++++.
T Consensus 181 ~~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~-----~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~ 255 (543)
T 3c4z_A 181 PMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKR-----LKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255 (543)
T ss_dssp CCCGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHH-----HHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred cCChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHH-----hhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 345678999999999999999999984 6678888764321 111111234478999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
+.. ..|+||||++||+|.+++..... ....+++..++.|+.||+.||.|||++||+||||||+||
T Consensus 256 ~~~--------------~l~lVmE~~~gg~L~~~l~~~~~-~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NI 320 (543)
T 3c4z_A 256 TKT--------------DLCLVMTIMNGGDIRYHIYNVDE-DNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENV 320 (543)
T ss_dssp CSS--------------EEEEEECCCTTCBHHHHHHTSST-TSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred eCC--------------EEEEEEEeccCCCHHHHHHHhhc-ccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHE
Confidence 655 35999999999999999975321 134699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||+++.+..... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 321 Ll~~~-------g~vkL~DFGla~~~~~~~~----------~~~~~~GT~~Y~APE~l~~----~~~~~~~DiwSlGvil 379 (543)
T 3c4z_A 321 LLDDD-------GNVRISDLGLAVELKAGQT----------KTKGYAGTPGFMAPELLLG----EEYDFSVDYFALGVTL 379 (543)
T ss_dssp EECTT-------SCEEECCCTTCEECCTTCC----------CBCCCCSCTTTSCHHHHTT----CCBCTHHHHHHHHHHH
T ss_pred EEeCC-------CCEEEeecceeeeccCCCc----------ccccccCCccccChhhhcC----CCCChHHhcCcchHHH
Confidence 99987 8899999999976543211 1123479999999999986 5688999999999999
Q ss_pred HHHHhCCCCCCCCC----HHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1040 LELLTLQVPYMGLS----ELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~----~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|||++|+.||.+.. ..++...+...... .+ ...+..+.+||.+||+.|
T Consensus 380 yelltG~~PF~~~~~~~~~~~~~~~i~~~~~~-~p---------------------------~~~s~~~~~li~~lL~~d 431 (543)
T 3c4z_A 380 YEMIAARGPFRARGEKVENKELKQRVLEQAVT-YP---------------------------DKFSPASKDFCEALLQKD 431 (543)
T ss_dssp HHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCC-CC---------------------------TTSCHHHHHHHHHHSCSS
T ss_pred HHHHhCCCCCCCCccchhHHHHHHHHhhcccC-CC---------------------------cccCHHHHHHHHHhccCC
Confidence 99999999997642 34444444332211 10 145667999999999999
Q ss_pred CCCCCC-----HHHHHHHHHhhc
Q 001143 1116 PTERPT-----AGDLYEMFVART 1133 (1141)
Q Consensus 1116 P~~RPS-----a~ElL~~L~~~~ 1133 (1141)
|.+||+ ++++++|+||+.
T Consensus 432 P~~R~~~~~~~a~ei~~Hpff~~ 454 (543)
T 3c4z_A 432 PEKRLGFRDGSCDGLRTHPLFRD 454 (543)
T ss_dssp GGGSCCCBTTBSHHHHTSGGGTT
T ss_pred HhHCCCCcccCHHHHHcCccccC
Confidence 999996 589999999975
No 177
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=8.4e-38 Score=345.22 Aligned_cols=263 Identities=24% Similarity=0.288 Sum_probs=204.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
+++|++.+.||+|+||.||+|.+. +..+|+|+...... ....+ .+.+|+.+++.++||||+++++++.+..
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 78 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA---VDCPE----NIKKEICINKMLNHENVVKFYGHRREGN 78 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGC---TTHHH----HHHHHHHHHHTCCCTTBCCEEEEEEETT
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccc---hhhhH----HHHHHHHHHHhcCCCCceeeeeEEEcCC
Confidence 356999999999999999999985 66788887654321 11222 3479999999999999999999988654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus 79 --------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~ 139 (276)
T 2yex_A 79 --------------IQYLFLEYCSGGELFDRIEP-----DIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD 139 (276)
T ss_dssp --------------EEEEEEECCTTEEGGGGSBT-----TTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred --------------EEEEEEEecCCCcHHHHHhh-----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc
Confidence 34999999999999988754 34699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||.+......... .......||+.|+|||++.+. ..++.++||||||+++|+|
T Consensus 140 ~~-------~~~kl~dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG~il~~l 201 (276)
T 2yex_A 140 ER-------DNLKISDFGLATVFRYNNRE--------RLLNKMCGTLPYVAPELLKRR---EFHAEPVDVWSCGIVLTAM 201 (276)
T ss_dssp TT-------CCEEECCCTTCEECEETTEE--------CCBCCCCSCGGGCCGGGGTCS---SBCHHHHHHHHHHHHHHHH
T ss_pred cC-------CCEEEeeCCCccccCCCcch--------hcccCCccccCccChHHHhcC---CCCCCcchHHHHHHHHHHH
Confidence 87 78999999999765432111 011234689999999998751 2346899999999999999
Q ss_pred HhCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++|+.||...... .....+...... .. .....+..+.+++.+||+.||.+|||
T Consensus 202 ~~g~~p~~~~~~~~~~~~~~~~~~~~-~~-------------------------~~~~~~~~~~~li~~~l~~~p~~Rps 255 (276)
T 2yex_A 202 LAGELPWDQPSDSCQEYSDWKEKKTY-LN-------------------------PWKKIDSAPLALLHKILVENPSARIT 255 (276)
T ss_dssp HHSSCCCSCSCTTSHHHHHHHTTCTT-ST-------------------------TGGGSCHHHHHHHHHHSCSSTTTSCC
T ss_pred HhCCCCCCCCchHHHHHHHhhhcccc-cC-------------------------chhhcCHHHHHHHHHHCCCCchhCCC
Confidence 9999999765432 122222211110 00 00145667899999999999999999
Q ss_pred HHHHHHHHHhhcCCCC
Q 001143 1122 AGDLYEMFVARTSSSI 1137 (1141)
Q Consensus 1122 a~ElL~~L~~~~~s~~ 1137 (1141)
+.|+++|+|+......
T Consensus 256 ~~~il~~~~~~~~~~~ 271 (276)
T 2yex_A 256 IPDIKKDRWYNKPLKK 271 (276)
T ss_dssp HHHHTTCTTTTCCCC-
T ss_pred HHHHhcCccccChhhc
Confidence 9999999999865443
No 178
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=4.3e-37 Score=346.84 Aligned_cols=268 Identities=22% Similarity=0.346 Sum_probs=201.3
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-----ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS-----ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~-----~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
...+|.+.+.||+|+||.||+|.+.. ..+|+|+.. .........+.+ .+|+.++++++||||+++++++
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~--~~~~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~ 105 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMK--LDNSSQREIEEF----LSEAACMKDFSHPNVIRLLGVC 105 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC-----CCCHHHHHHH----HHHHHHHHTCCCTTBCCCCEEE
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEe--ccccchhHHHHH----HHHHHHHhcCCCCCeeeeeEEE
Confidence 34579999999999999999998732 257777643 223333333444 8999999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh-cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE-TGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~-~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
.+.... .....++||||+++++|.+++..... .....+++..++.|+.||+.||.|||++||+||||||+
T Consensus 106 ~~~~~~---------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~ 176 (313)
T 3brb_A 106 IEMSSQ---------GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAAR 176 (313)
T ss_dssp EC----------------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGG
T ss_pred eecccc---------CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcc
Confidence 864321 12346999999999999999964321 23457999999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
||+++.+ +.+||+|||++......... .......+++.|+|||++.+ ..++.++||||||+
T Consensus 177 NIli~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~ 237 (313)
T 3brb_A 177 NCMLRDD-------MTVCVADFGLSKKIYSGDYY--------RQGRIAKMPVKWIAIESLAD----RVYTSKSDVWAFGV 237 (313)
T ss_dssp GEEECTT-------SCEEECSCSCC------------------------CCGGGSCHHHHHS----SCCCHHHHHHHHHH
T ss_pred eEEEcCC-------CcEEEeecCcceeccccccc--------CcccccCCCccccCchhhcC----CCccchhhhHHHHH
Confidence 9999887 78999999999765432111 11123457889999999976 56889999999999
Q ss_pred HHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|+|++ |..||.+....+....+..+..+..+. ..++.+.+++.+||..||
T Consensus 238 il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp 290 (313)
T 3brb_A 238 TMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQPE---------------------------DCLDELYEIMYSCWRTDP 290 (313)
T ss_dssp HHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCBT---------------------------TCCHHHHHHHHHTTCSSG
T ss_pred HHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCCCc---------------------------cccHHHHHHHHHHcCCCh
Confidence 9999999 899998877766666665544332221 455679999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001143 1117 TERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~ 1132 (1141)
.+|||+.++++++...
T Consensus 291 ~~Rps~~~l~~~L~~l 306 (313)
T 3brb_A 291 LDRPTFSVLRLQLEKL 306 (313)
T ss_dssp GGSCCHHHHHHHHHHH
T ss_pred hhCcCHHHHHHHHHHH
Confidence 9999999999998754
No 179
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=3.3e-37 Score=357.87 Aligned_cols=282 Identities=19% Similarity=0.202 Sum_probs=205.4
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|.+.+.||+|+||.||+|.+. +..||+|+.. .........+ ++.+|+.++++++||||+++++++.....
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~--~~~~~~~~~~----~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 115 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS--RPFQSEIFAK----RAYRELLLLKHMQHENVIGLLDVFTPASS 115 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC--STTSSHHHHH----HHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEec--ccccchhHHH----HHHHHHHHHHhcCCCCchhhhhheeccCC
Confidence 57999999999999999999985 5667777653 2222333233 34799999999999999999999986543
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. ......++||||+. ++|.+++.. .+++..+..++.||+.||.|||++||+||||||+|||++.
T Consensus 116 ~--------~~~~~~~lv~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~ 179 (371)
T 4exu_A 116 L--------RNFYDFYLVMPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE 179 (371)
T ss_dssp S--------TTCCCCEEEEECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred c--------ccceeEEEEEcccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECC
Confidence 2 12234599999997 788877632 5999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+++..... .....||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 180 ~-------~~~kL~Dfg~a~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~el~ 236 (371)
T 4exu_A 180 D-------CELKILDFGLARHADAE-------------MTGYVVTRWYRAPEVILS---WMHYNQTVDIWSVGCIMAEML 236 (371)
T ss_dssp T-------CCEEECSTTCC---------------------CTTCCCTTSCHHHHSC---CSCCCTTHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEecCcccccccC-------------cCCcccCccccCHHHhcC---CCCCCcHHhHHHHHHHHHHHH
Confidence 7 78999999999754321 123468999999999875 246789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccC---CCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSG---SGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|+.||.+.+..+....+.. ...+. ................... ............++.+.+||.+||+.||.+|
T Consensus 237 ~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 315 (371)
T 4exu_A 237 TGKTLFKGKDYLDQLTQILKVTGVPG-TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR 315 (371)
T ss_dssp HSSCSCCCSSHHHHHHHHHHHHCCCC-HHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTS
T ss_pred hCCCCCCCCChHHHHHHHHHHhCCCc-HHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhc
Confidence 99999998877776655532 22221 1111110000000000000 0000011112457789999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
||+.|+++|+|+..
T Consensus 316 pt~~ell~hp~f~~ 329 (371)
T 4exu_A 316 LTAAQALTHPFFEP 329 (371)
T ss_dssp CCHHHHHTSGGGTT
T ss_pred CCHHHHhcCccccc
Confidence 99999999999974
No 180
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=5.3e-37 Score=342.82 Aligned_cols=256 Identities=21% Similarity=0.322 Sum_probs=203.0
Q ss_pred CCCceEee-eecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 805 FPSLSSCD-EAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 805 ~~~y~i~~-~LG~GsfG~Vy~a~~~----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
..+|++.+ .||+|+||.||+|.+. +..+|+|+.... .......+ .+.+|+.++++++||||+++++++.
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~--~~~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~ 88 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE--ANDPALKD----ELLAEANVMQQLDNPYIVRMIGICE 88 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-------CHHHH----HHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeeccc--ccCHHHHH----HHHHHHHHHHhCCCCCEEEEEEEEC
Confidence 45789988 9999999999999752 456777775432 11222223 3489999999999999999999984
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
. . ..++||||+++++|.+++.. ...+++..+..++.||+.||.|||++||+||||||+||
T Consensus 89 ~-~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Ni 148 (291)
T 1xbb_A 89 A-E--------------SWMLVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNV 148 (291)
T ss_dssp S-S--------------SEEEEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred C-C--------------CcEEEEEeCCCCCHHHHHHh-----CcCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceE
Confidence 3 2 24899999999999999986 34699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.+||+|||++........... ......+|+.|+|||++.+ ..++.++||||||+++
T Consensus 149 l~~~~-------~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 210 (291)
T 1xbb_A 149 LLVTQ-------HYAKISDFGLSKALRADENYYK-------AQTHGKWPVKWYAPECINY----YKFSSKSDVWSFGVLM 210 (291)
T ss_dssp EEEET-------TEEEECCCTTCEECCTTCSEEE-------C----CCCGGGCCHHHHHH----CEEEHHHHHHHHHHHH
T ss_pred EEeCC-------CcEEEccCCcceeeccCCCccc-------ccccCCCCceeeChHHhcc----CCCChhhhHHHHHHHH
Confidence 99987 7899999999976543221100 1112346789999999976 4577899999999999
Q ss_pred HHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+|++ |+.||.+....++...+..+..+..+. ..+..+.+++.+||+.||.+
T Consensus 211 ~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dp~~ 263 (291)
T 1xbb_A 211 WEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPA---------------------------GCPREMYDLMNLCWTYDVEN 263 (291)
T ss_dssp HHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSTTT
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhh
Confidence 99999 999999888877777766554433221 45567999999999999999
Q ss_pred CCCHHHHHHHHHh
Q 001143 1119 RPTAGDLYEMFVA 1131 (1141)
Q Consensus 1119 RPSa~ElL~~L~~ 1131 (1141)
||++.++++.+..
T Consensus 264 Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 264 RPGFAAVELRLRN 276 (291)
T ss_dssp SCCHHHHHHHHHH
T ss_pred CcCHHHHHHHHHH
Confidence 9999999988754
No 181
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=9.3e-37 Score=340.70 Aligned_cols=267 Identities=16% Similarity=0.176 Sum_probs=203.1
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~ 881 (1141)
-.+|++.+.||+|+||.||+|.+ .+..+|+|+..... ..+. +.+|+.+++++ +|+||+++++++...
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~----~~~e~~~~~~l~~~~~i~~~~~~~~~~ 78 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS------DAPQ----LRDEYRTYKLLAGCTGIPNVYYFGQEG 78 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT------TSCC----HHHHHHHHHHTTTCTTCCCEEEEEEET
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC------ccHH----HHHHHHHHHHHhcCCCCCeEEeecCCC
Confidence 35699999999999999999996 56778888754221 1122 36899999999 799999999998765
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..++||||+ +++|.+++... ...+++..+..|+.||+.||.|||++||+||||||+|||+
T Consensus 79 ~--------------~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~ 139 (298)
T 1csn_A 79 L--------------HNVLVIDLL-GPSLEDLLDLC----GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLI 139 (298)
T ss_dssp T--------------EEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE
T ss_pred c--------------eeEEEEEec-CCCHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEe
Confidence 4 349999999 89999999862 2369999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.++. .....+||+|||++........... ..........||+.|+|||++.+ ..++.++|||||||++|+
T Consensus 140 ~~~~~--~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~e 210 (298)
T 1csn_A 140 GRPNS--KNANMIYVVDFGMVKFYRDPVTKQH---IPYREKKNLSGTARYMSINTHLG----REQSRRDDLEALGHVFMY 210 (298)
T ss_dssp CCSSS--TTTTCEEECCCTTCEESBCTTTCCB---CCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHHHH
T ss_pred ccCCC--CCCCeEEEEECcccccccccccccc---ccccCccCCCCCcccCCchhhcC----CCCChHHHHHHHHHHHHH
Confidence 87621 1224599999999987654321110 01112335579999999999876 567899999999999999
Q ss_pred HHhCCCCCCCC---CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1042 LLTLQVPYMGL---SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1042 LLTGk~Pf~~~---~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|++|+.||.+. ...+....+......... +......++.+.+++.+||+.||.+
T Consensus 211 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~dp~~ 267 (298)
T 1csn_A 211 FLRGSLPWQGLKAATNKQKYERIGEKKQSTPL-----------------------RELCAGFPEEFYKYMHYARNLAFDA 267 (298)
T ss_dssp HHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH-----------------------HHHTTTSCHHHHHHHHHHHHCCTTC
T ss_pred HHcCCCCcchhhccccHHHHHHHHhhccCccH-----------------------HHHHhhCcHHHHHHHHHHhcCCccc
Confidence 99999999863 233333333221110000 0011145678999999999999999
Q ss_pred CCCHHHHHHHHHhh
Q 001143 1119 RPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~ 1132 (1141)
||++.+|++.+...
T Consensus 268 RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 268 TPDYDYLQGLFSKV 281 (298)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 99999999987654
No 182
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.3e-37 Score=365.29 Aligned_cols=281 Identities=22% Similarity=0.249 Sum_probs=203.5
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC------CCCCccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL------RHSCIVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L------~HpNIVkllg 876 (1141)
..+|++.++||+|+||.||+|.+. +..||+|+... ....... +.+|+.+++.+ .|+||+++++
T Consensus 96 ~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~-----~~~~~~~----~~~E~~~l~~l~~~~~~~~~~iv~~~~ 166 (429)
T 3kvw_A 96 AYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN-----EKRFHRQ----AAEEIRILEHLRKQDKDNTMNVIHMLE 166 (429)
T ss_dssp TTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS-----CHHHHHH----HHHHHHHHHHHHTTCTTSCSCBCCEEE
T ss_pred cCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC-----ccchHHH----HHHHHHHHHHHhhccccCCcCEEEEEe
Confidence 346999999999999999999985 45677777532 1222222 36788887776 5789999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKS 956 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP 956 (1141)
++.... +.++||||+. ++|.+++.. .....+++..++.|+.||+.||+|||++||+||||||
T Consensus 167 ~~~~~~--------------~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp 228 (429)
T 3kvw_A 167 NFTFRN--------------HICMTFELLS-MNLYELIKK---NKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKP 228 (429)
T ss_dssp EEEETT--------------EEEEEECCCC-CBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSG
T ss_pred ecccCC--------------eEEEEEeccC-CCHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCH
Confidence 998655 4599999996 799999986 2334599999999999999999999999999999999
Q ss_pred CCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 957 ENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 957 ~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
+|||++.++. ..+||+|||++...... .....||+.|+|||++.+ ..++.++||||||
T Consensus 229 ~NILl~~~~~-----~~vkL~DFG~a~~~~~~-------------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwSlG 286 (429)
T 3kvw_A 229 ENILLKQQGR-----SGIKVIDFGSSCYEHQR-------------VYTYIQSRFYRAPEVILG----ARYGMPIDMWSLG 286 (429)
T ss_dssp GGEEESSTTS-----CCEEECCCTTCEETTCC-------------CCSSCSCGGGCCHHHHHT----BCCCTHHHHHHHH
T ss_pred HHeEEccCCC-----cceEEeecccceecCCc-------------ccccCCCCCccChHHHhC----CCCCchHHHHhHH
Confidence 9999987721 23999999998653321 123468999999999986 5688999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCc----cccc--------------------cccC---C
Q 001143 1037 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCH----EHEV--------------------AQSG---S 1089 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~----~~~~--------------------~~~~---~ 1089 (1141)
|++|||++|..||.+.+..+....+...........+....... .... .... .
T Consensus 287 ~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (429)
T 3kvw_A 287 CILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRG 366 (429)
T ss_dssp HHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEEC
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCcccccccccccccccccccccchhhccC
Confidence 99999999999999888777665553222211111111100000 0000 0000 0
Q ss_pred CCCCch----hhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1090 GFEKPE----AELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1090 ~~~~~~----~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
...... .....++.+.+||.+||++||++|||+.|+++|+|++..
T Consensus 367 ~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~ 415 (429)
T 3kvw_A 367 PPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415 (429)
T ss_dssp STTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred CccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence 000000 011235779999999999999999999999999999864
No 183
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=3.9e-37 Score=348.95 Aligned_cols=285 Identities=20% Similarity=0.229 Sum_probs=205.9
Q ss_pred CCCceEeeeecccCceEEEEEEE---CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCC------Ccccee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF---GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS------CIVEMY 875 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~---~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp------NIVkll 875 (1141)
..+|++.+.||+|+||.||+|.+ .+..||+|+... .....+ .+.+|+.+++.++|+ +|++++
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~-----~~~~~~----~~~~e~~~l~~l~~~~~~~~~~i~~~~ 83 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN-----VDRYCE----AARSEIQVLEHLNTTDPNSTFRCVQML 83 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS-----SHHHHH----HHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec-----CCchhH----HHHHHHHHHHHhhhcCCCCceeeEeee
Confidence 35799999999999999999987 356788887531 122222 337899999888655 499999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 955 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLK 955 (1141)
+++...+ +.++||||+ +++|.+++.. .+...+++..+..++.||+.||+|||++||+|||||
T Consensus 84 ~~~~~~~--------------~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlk 145 (339)
T 1z57_A 84 EWFEHHG--------------HICIVFELL-GLSTYDFIKE---NGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLK 145 (339)
T ss_dssp EEEEETT--------------EEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCC
T ss_pred cccccCC--------------cEEEEEcCC-CCCHHHHHHh---cCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCC
Confidence 9988655 459999999 7999999976 333468999999999999999999999999999999
Q ss_pred CCCeeeeccccc------------CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001143 956 SENILIDLERKK------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1023 (1141)
Q Consensus 956 P~NILld~~~~~------------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1023 (1141)
|+|||++..... ....+.+||+|||++...... .....||+.|+|||++.+
T Consensus 146 p~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~---- 208 (339)
T 1z57_A 146 PENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEH-------------HSTLVSTRHYRAPEVILA---- 208 (339)
T ss_dssp GGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTSC-------------CCSSCSCGGGCCHHHHTT----
T ss_pred HHHEEEeccccccccCCccccccccccCCCceEeeCcccccCccc-------------cccccCCccccChHHhhC----
Confidence 999999763100 000267999999998753321 123468999999999976
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCcc-c--c------------ccccC
Q 001143 1024 NLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHE-H--E------------VAQSG 1088 (1141)
Q Consensus 1024 ~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~-~--~------------~~~~~ 1088 (1141)
..++.++|||||||++|||++|..||...+..+....+.....+.............. . . .....
T Consensus 209 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (339)
T 1z57_A 209 LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRAC 288 (339)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHC
T ss_pred CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcC
Confidence 5688999999999999999999999998777665555433222211111111000000 0 0 00000
Q ss_pred CCC-CCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1089 SGF-EKPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1089 ~~~-~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
... .........++.+.+|+.+||+.||.+|||+.|+++|+|+..
T Consensus 289 ~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~ 334 (339)
T 1z57_A 289 KPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDL 334 (339)
T ss_dssp CCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred cchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHH
Confidence 000 000001245778999999999999999999999999999975
No 184
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=4.2e-37 Score=354.37 Aligned_cols=295 Identities=16% Similarity=0.164 Sum_probs=207.3
Q ss_pred CCCceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCCh---HHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSA---DEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~---~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+|++.+.||+|+||.||+|.+ .+..+|+|+.......... .........+.+|+.++++++||||+++++++..
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~ 100 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVH 100 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEe
Confidence 35799999999999999999987 4667888876433221110 1111222445899999999999999999999865
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
... ......++||||++ ++|.+++.. ....+++..+..|+.||+.||.|||++||+||||||+|||
T Consensus 101 ~~~---------~~~~~~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl 166 (362)
T 3pg1_A 101 FEE---------PAMHKLYLVTELMR-TDLAQVIHD----QRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNIL 166 (362)
T ss_dssp CCT---------TTCCEEEEEEECCS-EEHHHHHHC----TTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred ccC---------CCcceEEEEEccCC-CCHHHHHHh----cccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEE
Confidence 321 12336799999998 789888874 2346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||++....... ......||+.|+|||++.+ ...++.++|||||||++|
T Consensus 167 ~~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~t~~y~aPE~~~~---~~~~~~~~DiwslG~il~ 225 (362)
T 3pg1_A 167 LADN-------NDITICDFNLAREDTADA-----------NKTHYVTHRWYRAPELVMQ---FKGFTKLVDMWSAGCVMA 225 (362)
T ss_dssp ECTT-------CCEEECCTTC--------------------------CGGGCCHHHHTT---CTTCCTHHHHHHHHHHHH
T ss_pred EcCC-------CCEEEEecCccccccccc-----------ccceecccceecCcHHhcC---CCCCCcHhHHHhHHHHHH
Confidence 9887 789999999997533211 1123468999999999875 245789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCC---CCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGF---EKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+|++|+.||.+....+....+ .....+........................ .........++.+.+||.+||+.||
T Consensus 226 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 305 (362)
T 3pg1_A 226 EMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNP 305 (362)
T ss_dssp HHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSG
T ss_pred HHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCCh
Confidence 999999999988777666555 333333332211100000000000000000 0011122456779999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001143 1117 TERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~ 1134 (1141)
.+|||+.|+++|+|+..-
T Consensus 306 ~~Rpt~~ell~hp~f~~~ 323 (362)
T 3pg1_A 306 QRRISTEQALRHPYFESL 323 (362)
T ss_dssp GGSCCHHHHHTSGGGTTT
T ss_pred hhCCCHHHHHcCchhhhc
Confidence 999999999999999753
No 185
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=4.1e-37 Score=349.78 Aligned_cols=271 Identities=21% Similarity=0.337 Sum_probs=209.4
Q ss_pred CCCCCCCCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCc
Q 001143 799 GLDPGSFPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI 871 (1141)
Q Consensus 799 ~~~~~~~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI 871 (1141)
.+......+|++.+.||+|+||.||+|++. +..+|+|+.. .. ........ +.+|+.++++++||||
T Consensus 23 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~----~~~E~~~l~~l~h~~i 95 (327)
T 2yfx_A 23 DLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLP--EV-CSEQDELD----FLMEALIISKFNHQNI 95 (327)
T ss_dssp GSCBCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECC--SS-CCHHHHHH----HHHHHHHHHHCCCTTB
T ss_pred hcccCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEec--cc-cchhhHHH----HHHHHHHHhhCCCCCC
Confidence 344455678999999999999999999842 3457777643 21 12233333 4799999999999999
Q ss_pred cceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCc
Q 001143 872 VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSKHI 949 (1141)
Q Consensus 872 Vkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~--~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gI 949 (1141)
+++++++.+.... ++||||+++++|.+++...... ....+++..++.++.||+.||.|||++||
T Consensus 96 v~~~~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i 161 (327)
T 2yfx_A 96 VRCIGVSLQSLPR--------------FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHF 161 (327)
T ss_dssp CCEEEEECSSSSC--------------EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CeEEEEEcCCCCc--------------EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCe
Confidence 9999999875543 9999999999999999873221 11358999999999999999999999999
Q ss_pred cccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCch
Q 001143 950 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLE 1029 (1141)
Q Consensus 950 vHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~k 1029 (1141)
+||||||+|||++.++ ....+||+|||++......... .......||+.|+|||++.+ ..++.+
T Consensus 162 ~H~dlkp~NIli~~~~----~~~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~~~~ 225 (327)
T 2yfx_A 162 IHRDIAARNCLLTCPG----PGRVAKIGDFGMARDIYRASYY--------RKGGCAMLPVKWMPPEAFME----GIFTSK 225 (327)
T ss_dssp CCSCCCGGGEEESCSS----TTCCEEECCCHHHHHHHC--------------CCGGGSCGGGCCHHHHHH----CCCCHH
T ss_pred ecCcCCHhHEEEecCC----CcceEEECcccccccccccccc--------ccCCCcCCCcceeCHhHhcC----CCCCch
Confidence 9999999999998541 1157999999999754332111 11223458899999999976 568899
Q ss_pred hhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHH
Q 001143 1030 VDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF 1108 (1141)
Q Consensus 1030 sDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI 1108 (1141)
+||||||+++|+|++ |..||......+....+..+..+..+. ..+..+.+++
T Consensus 226 ~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li 278 (327)
T 2yfx_A 226 TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK---------------------------NCPGPVYRIM 278 (327)
T ss_dssp HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCC---------------------------CCCHHHHHHH
Confidence 999999999999998 999999877777777665554332211 4456799999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1109 RRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1109 ~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.+||+.||.+|||+.++++++++..
T Consensus 279 ~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 279 TQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp HHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhcCChhhCcCHHHHHHHHHHHh
Confidence 9999999999999999999999863
No 186
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=4e-37 Score=360.05 Aligned_cols=260 Identities=21% Similarity=0.301 Sum_probs=197.3
Q ss_pred CCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC--CCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--HpNIVkllg~~~~~~ 882 (1141)
..|++.+.||+|+||.||+|.+. +..+|+|+.... .......+.+ .+|+.++.+++ ||||+++++++....
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~--~~~~~~~~~~----~~Ei~~l~~l~~~~~~iv~~~~~~~~~~ 129 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLE--EADNQTLDSY----RNEIAYLNKLQQHSDKIIRLYDYEITDQ 129 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECT--TCCHHHHHHH----HHHHHHHHHHTTTCTTBCCEEEEEECSS
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecc--cccHHHHHHH----HHHHHHHHHcccCCCeEEEEEEEEecCC
Confidence 35999999999999999999874 566888876543 2233333444 89999999996 599999999988655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||| +.+++|.+++.. ...+++.++..|+.||+.||.|||++||+||||||+|||++
T Consensus 130 --------------~~~lv~E-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~ 189 (390)
T 2zmd_A 130 --------------YIYMVME-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 189 (390)
T ss_dssp --------------EEEEEEE-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES
T ss_pred --------------EEEEEEe-cCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE
Confidence 3599999 557899999986 34689999999999999999999999999999999999995
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-------CCCCCCchhhHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWSY 1035 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~s~ksDVWSL 1035 (1141)
. +.+||+|||+++.+...... ......+||+.|+|||++.+.. ....++.++|||||
T Consensus 190 ~--------~~~kl~DFG~a~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSl 253 (390)
T 2zmd_A 190 D--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 253 (390)
T ss_dssp S--------SCEEECCCSSSCCC-----------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHH
T ss_pred C--------CeEEEEecCccccccCCCcc--------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHH
Confidence 3 67999999999765432111 1122456999999999987521 11358899999999
Q ss_pred HHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCC-CCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001143 1036 GCLLLELLTLQVPYMGLSE-LEIHDLIQMGKR-PRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~~~~-~el~~~I~~~~~-p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~ 1113 (1141)
||++|+|++|+.||..... ......+..... ...+ ...+..+.+||.+||+
T Consensus 254 Gvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~L~ 306 (390)
T 2zmd_A 254 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---------------------------DIPEKDLQDVLKCCLK 306 (390)
T ss_dssp HHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCC---------------------------CCSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCC---------------------------ccchHHHHHHHHHHcc
Confidence 9999999999999976432 223333322111 0000 0224568999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcC
Q 001143 1114 ENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.||.+|||+.|+++|+|+...
T Consensus 307 ~dP~~Rps~~ell~hp~~~~~ 327 (390)
T 2zmd_A 307 RDPKQRISIPELLAHPYVQIQ 327 (390)
T ss_dssp SSTTTSCCHHHHHTSHHHHSC
T ss_pred cChhhCCCHHHHhhCcCcccc
Confidence 999999999999999999754
No 187
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.1e-37 Score=344.02 Aligned_cols=260 Identities=26% Similarity=0.321 Sum_probs=209.0
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|++. +..+++|+....... ....+. +.+|+.++++++||||+++++++.+..
T Consensus 22 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~--~~~~~~----~~~e~~~l~~l~h~~i~~~~~~~~~~~- 94 (287)
T 2wei_A 22 ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAK--NKDTST----ILREVELLKKLDHPNIMKLFEILEDSS- 94 (287)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBS--SSCHHH----HHHHHHHHHTCCCTTBCCEEEEEECSS-
T ss_pred hcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccc--hHHHHH----HHHHHHHHHhccCCCccEEEEEEeCCC-
Confidence 46999999999999999999984 677888886543221 122223 379999999999999999999988654
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 95 -------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~ 156 (287)
T 2wei_A 95 -------------SFYIVGELYTGGELFDEIIK-----RKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156 (287)
T ss_dssp -------------EEEEEECCCCSCBHHHHHHH-----HSSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESC
T ss_pred -------------eEEEEEEccCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEec
Confidence 34999999999999998875 236999999999999999999999999999999999999976
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
++ ..+.+||+|||++....... ......||+.|+|||++.+ .++.++||||||+++|+|+
T Consensus 157 ~~----~~~~~kL~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~-----~~~~~~Di~slG~~l~~l~ 216 (287)
T 2wei_A 157 KE----KDCDIKIIDFGLSTCFQQNT-----------KMKDRIGTAYYIAPEVLRG-----TYDEKCDVWSAGVILYILL 216 (287)
T ss_dssp SS----TTCCEEECSTTGGGTBCCCS-----------SCSCHHHHHTTCCHHHHTT-----CCCTHHHHHHHHHHHHHHH
T ss_pred CC----CcccEEEeccCcceeecCCC-----------ccccccCcccccChHHhcC-----CCCCchhhHhHHHHHHHHH
Confidence 42 12579999999987543321 1123358899999999875 4789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1044 TLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
+|..||.+....+....+..+........ ....+..+.+++.+||..||.+|||+.
T Consensus 217 ~g~~p~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~li~~~l~~dp~~Rps~~ 272 (287)
T 2wei_A 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQ------------------------WRTISDDAKDLIRKMLTFHPSLRITAT 272 (287)
T ss_dssp HSSCSSCCSSHHHHHHHHHHCCCCCCSGG------------------------GTTSCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred hCCCCCCCCCHHHHHHHHHcCCCCCCchh------------------------hhhcCHHHHHHHHHHcccChhhCcCHH
Confidence 99999998887777776655443211100 014566799999999999999999999
Q ss_pred HHHHHHHhhcC
Q 001143 1124 DLYEMFVARTS 1134 (1141)
Q Consensus 1124 ElL~~L~~~~~ 1134 (1141)
|+++|+|+...
T Consensus 273 ell~hp~~~~~ 283 (287)
T 2wei_A 273 QCLEHPWIQKY 283 (287)
T ss_dssp HHHHSHHHHHH
T ss_pred HHhcCHHHhcc
Confidence 99999999754
No 188
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=6.8e-37 Score=344.75 Aligned_cols=267 Identities=25% Similarity=0.419 Sum_probs=199.3
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
....+.+|++.+.||+|+||.||+|.+ .+..+|+|+..... .......+. +.+|+.++++++||||+++++++
T Consensus 27 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~ 101 (310)
T 2wqm_A 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFD-LMDAKARAD----CIKEIDLLKQLNHPNVIKYYASF 101 (310)
T ss_dssp TTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTS-SCCHHHHHH----HHHHHHHHHTCCCTTBCCEEEEE
T ss_pred ccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhh-ccCHHHHHH----HHHHHHHHHhCCCCCEeeEEEEE
Confidence 455678899999999999999999997 46678888764322 122233333 47999999999999999999999
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
...+ ..++||||+++++|.+++...... ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 102 ~~~~--------------~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~N 166 (310)
T 2wqm_A 102 IEDN--------------ELNIVLELADAGDLSRMIKHFKKQ-KRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPAN 166 (310)
T ss_dssp EETT--------------EEEEEEECCCSCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred EcCC--------------cEEEEEecCCCCCHHHHHHHhccc-ccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHH
Confidence 8655 349999999999999999764332 3469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
|+++.+ +.+||+|||++........ ......||+.|+|||++.+ ..++.++||||||++
T Consensus 167 Il~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Dv~slG~i 225 (310)
T 2wqm_A 167 VFITAT-------GVVKLGDLGLGRFFSSKTT----------AAHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCL 225 (310)
T ss_dssp EEECTT-------SCEEECCC----------------------------CCSSCCHHHHTT----CCCCHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEEeccceeeecCCCc----------cccccCCCeeEeChHHhCC----CCCCchhhHHHHHHH
Confidence 999877 7899999999876543211 1123468999999999876 568899999999999
Q ss_pred HHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1039 LLELLTLQVPYMGL--SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~--~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+|+|++|+.||.+. ...+....+.....+.... ...+.++.+++.+||..||
T Consensus 226 l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~dp 279 (310)
T 2wqm_A 226 LYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS--------------------------DHYSEELRQLVNMCINPDP 279 (310)
T ss_dssp HHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCT--------------------------TTSCHHHHHHHHHHTCSSG
T ss_pred HHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcc--------------------------cccCHHHHHHHHHHcCCCh
Confidence 99999999999753 2333444444333222110 1455679999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001143 1117 TERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~ 1134 (1141)
.+|||+.++++++.....
T Consensus 280 ~~Rps~~~il~~l~~l~~ 297 (310)
T 2wqm_A 280 EKRPDVTYVYDVAKRMHA 297 (310)
T ss_dssp GGSCCHHHHHHHHHHHHH
T ss_pred hhCCCHHHHHHHHHHHHH
Confidence 999999999999877643
No 189
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=6.8e-38 Score=350.37 Aligned_cols=278 Identities=23% Similarity=0.330 Sum_probs=193.1
Q ss_pred CCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
....+|++.+.||+|+||.||+|.+ .+..||+|+..... . ....+ .+.+|+.++++++||||+++++++..
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~-~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~~~ 84 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEK--C-QTSMD----ELLKEIQAMSQCHHPNIVSYYTSFVV 84 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------------CCCCCCCTTBCCEEEEEES
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhh--c-chhHH----HHHHHHHHHhhcCCCCEeeEEEEEee
Confidence 3457899999999999999999987 45667777643221 1 11222 34789999999999999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~---~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
.+. .++||||+++++|.+++...... ....+++..+..++.||+.||.|||++||+||||||+
T Consensus 85 ~~~--------------~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ 150 (303)
T 2vwi_A 85 KDE--------------LWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAG 150 (303)
T ss_dssp SSC--------------EEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGG
T ss_pred cCC--------------cEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChh
Confidence 553 49999999999999999754322 2346999999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
||+++.+ +.+||+|||++.......... .........||+.|+|||++.+. ..++.++|||||||
T Consensus 151 Nil~~~~-------~~~kl~dfg~~~~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG~ 215 (303)
T 2vwi_A 151 NILLGED-------GSVQIADFGVSAFLATGGDIT-----RNKVRKTFVGTPCWMAPEVMEQV---RGYDFKADIWSFGI 215 (303)
T ss_dssp GEEECTT-------CCEEECCCHHHHHCC--------------------CCCTTCCHHHHHHH---HCCCTHHHHHHHHH
T ss_pred hEEEcCC-------CCEEEEeccchheeccCCCcc-----chhhhcccCCCccccCHHHhccc---cCCCchhhHHHHHH
Confidence 9999887 789999999987654321110 00112245689999999998652 24679999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1038 LLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
++|+|++|+.||.................+........ +......+..+.+++.+||+.||.
T Consensus 216 il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~li~~~l~~dp~ 277 (303)
T 2vwi_A 216 TAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQD------------------KEMLKKYGKSFRKMISLCLQKDPE 277 (303)
T ss_dssp HHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----------------------CCCCCCCHHHHHHHHHHCCSSGG
T ss_pred HHHHHHhCCCCCccCchhhHHHHHhccCCCcccccccc------------------chhhhhhhHHHHHHHHHHccCChh
Confidence 99999999999987665554443333333222211100 000114556799999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001143 1118 ERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~~ 1134 (1141)
+|||+.++++|+|+...
T Consensus 278 ~Rps~~~ll~h~~~~~~ 294 (303)
T 2vwi_A 278 KRPTAAELLRHKFFQKA 294 (303)
T ss_dssp GSCCHHHHHTSTTC---
T ss_pred hCcCHHHHhhChhhhcC
Confidence 99999999999999753
No 190
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=4.1e-37 Score=366.83 Aligned_cols=255 Identities=26% Similarity=0.359 Sum_probs=203.0
Q ss_pred CCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
..+|++.++||+|+||.||+|.+.+ ..||+|+.+ ..... .+.+ .+|+.+|++++||||+++++++.+ ..
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~--~~~~~---~~~~----~~E~~~l~~l~hp~iv~~~~~~~~-~~ 252 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLK--PGTMS---PEAF----LQEAQVMKKLRHEKLVQLYAVVSE-EP 252 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECC--TTSSC---HHHH----HHHHHHHHHCCCTTBCCEEEEECS-SS
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEec--cCCCC---HHHH----HHHHHHHHhCCCCCEeeEEEEEcC-Cc
Confidence 4579999999999999999999965 457777643 22211 2233 799999999999999999999864 22
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++|+|.++++.. ....+++..+..|+.||+.||+|||++||+||||||+|||++.
T Consensus 253 --------------~~iv~e~~~~gsL~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~ 315 (452)
T 1fmk_A 253 --------------IYIVTEYMSKGSLLDFLKGE---TGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE 315 (452)
T ss_dssp --------------CEEEECCCTTCBHHHHHSHH---HHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECG
T ss_pred --------------eEEEehhhcCCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECC
Confidence 38999999999999999752 1235899999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+++........ ......+++.|+|||++.+ ..++.++|||||||++|||+
T Consensus 316 ~-------~~~kl~DfG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwslG~~l~el~ 375 (452)
T 1fmk_A 316 N-------LVCKVADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELT 375 (452)
T ss_dssp G-------GCEEECCCCTTC-----------------------CCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEECCCccceecCCCcee---------cccCCcccccccCHhHHhc----CCCCccccHHhHHHHHHHHH
Confidence 7 78999999999765432111 1123347889999999986 56889999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |+.||.+....++...+..+.....+. .+++.+.++|.+||+.||++|||+
T Consensus 376 t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~Rpt~ 428 (452)
T 1fmk_A 376 TKGRVPYPGMVNREVLDQVERGYRMPCPP---------------------------ECPESLHDLMCQCWRKEPEERPTF 428 (452)
T ss_dssp TTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TSCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHccCChhhCcCH
Confidence 9 999999888888777776554332221 456679999999999999999999
Q ss_pred HHHHHHHHhhc
Q 001143 1123 GDLYEMFVART 1133 (1141)
Q Consensus 1123 ~ElL~~L~~~~ 1133 (1141)
+++++.+....
T Consensus 429 ~~l~~~L~~~~ 439 (452)
T 1fmk_A 429 EYLQAFLEDYF 439 (452)
T ss_dssp HHHHHHHHTTT
T ss_pred HHHHHHHHHHh
Confidence 99999887654
No 191
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.5e-37 Score=348.48 Aligned_cols=261 Identities=23% Similarity=0.365 Sum_probs=207.2
Q ss_pred CCCceEeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccce
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEM 874 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~---------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkl 874 (1141)
.++|++.+.||+|+||.||+|++. +..||+|+.. .. ......+. +.+|+.+++++ +||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~--~~-~~~~~~~~----~~~E~~~l~~l~~hp~iv~~ 106 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK--DD-ATEKDLSD----LVSEMEMMKMIGKHKNIINL 106 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECC--TT-CCHHHHHH----HHHHHHHHHHHCCCTTBCCE
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeec--cC-CcHHHHHH----HHHHHHHHHHhhcCCCEeeE
Confidence 467999999999999999999974 3457777643 21 12233333 47999999999 89999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHH
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVE 943 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----------~~~~Ls~~~i~~Ia~QIa~gL~y 943 (1141)
++++.+.+.+ ++||||+++++|.+++...... ....+++..++.++.||+.||.|
T Consensus 107 ~~~~~~~~~~--------------~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 172 (334)
T 2pvf_A 107 LGACTQDGPL--------------YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEY 172 (334)
T ss_dssp EEEECSSSCC--------------EEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEccCCce--------------EEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHH
Confidence 9999865543 9999999999999999863211 12348999999999999999999
Q ss_pred HHHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001143 944 LHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1023 (1141)
Q Consensus 944 LHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1023 (1141)
||++||+||||||+|||++.+ +.+||+|||++.......... ......+|+.|+|||++.+
T Consensus 173 LH~~~ivH~Dlkp~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~---- 233 (334)
T 2pvf_A 173 LASQKCIHRDLAARNVLVTEN-------NVMKIADFGLARDINNIDYYK--------KTTNGRLPVKWMAPEALFD---- 233 (334)
T ss_dssp HHHTTEECSCCSGGGEEECTT-------CCEEECCCTTCEECTTTSSEE--------CCSCCCCCGGGCCHHHHHH----
T ss_pred HHhCCeeCCCCccceEEEcCC-------CCEEEcccccccccccccccc--------ccCCCCcccceeChHHhcC----
Confidence 999999999999999999887 789999999997654322110 1123357889999999876
Q ss_pred CCCCchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHH
Q 001143 1024 NLYGLEVDIWSYGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLS 1102 (1141)
Q Consensus 1024 ~~~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1102 (1141)
..++.++|||||||++|+|++ |..||.+....++...+..+..+..+. .++.
T Consensus 234 ~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 286 (334)
T 2pvf_A 234 RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA---------------------------NCTN 286 (334)
T ss_dssp CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCT---------------------------TCCH
T ss_pred CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCc---------------------------cCCH
Confidence 457899999999999999999 999999888777777665544332211 4456
Q ss_pred HHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1103 FLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1103 ~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.+.+++.+||+.||.+|||+.|+++++...
T Consensus 287 ~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 287 ELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 799999999999999999999999998754
No 192
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=9.8e-38 Score=353.98 Aligned_cols=273 Identities=23% Similarity=0.294 Sum_probs=203.9
Q ss_pred CCCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
...+|++.+.||+|+||.||+|++. +..+|+|+.... .....+.+ .+|+.++++++||||+++++++.+.+
T Consensus 37 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~----~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 37 ATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPE----SSQGIEEF----ETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp CCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSC----CSSHHHHH----HHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred HHhccCccceeecCCCeeEEEEEECCCCEEEEEEeccc----ChHHHHHH----HHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 4568999999999999999999974 567788764322 12223333 79999999999999999999987655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. ++||||+++++|.+++.... .....+++..++.++.||+.||.|||++||+||||||+||+++
T Consensus 109 ~~--------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~ 173 (321)
T 2qkw_B 109 EM--------------ILIYKYMENGNLKRHLYGSD-LPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD 173 (321)
T ss_dssp CC--------------EEEEECCTTCBTGGGSSSSC-CCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC
T ss_pred eE--------------EEEEEcCCCCcHHHHHhccC-CCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC
Confidence 33 99999999999999886421 1223699999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++........ .......||+.|+|||++.+ ..++.++|||||||++|+|
T Consensus 174 ~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il~el 234 (321)
T 2qkw_B 174 EN-------FVPKITDFGISKKGTELDQT--------HLSTVVKGTLGYIDPEYFIK----GRLTEKSDVYSFGVVLFEV 234 (321)
T ss_dssp TT-------CCEEECCCTTCEECSSSSCC--------CCBCCCEEETTTCCHHHHHH----CBCCTHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeeccccccccccccc--------ccccccCCCccccCHHHhcC----CCCCcccchHhHHHHHHHH
Confidence 87 78999999999764332111 11123458999999999976 4678999999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHH----hCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1043 LTLQVPYMGLSELEIHDLIQ----MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~----~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
++|+.||.+....+....+. ......+. .... ...........+..+.+++.+||+.||++
T Consensus 235 l~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~---~~~~~~~~~~~~~~l~~li~~~l~~dP~~ 299 (321)
T 2qkw_B 235 LCARSAIVQSLPREMVNLAEWAVESHNNGQLE------------QIVD---PNLADKIRPESLRKFGDTAVKCLALSSED 299 (321)
T ss_dssp HHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCC------------SSSS---SSCTTCSCHHHHHHHHHHHHHHTCSSGGG
T ss_pred HhCCCcccccCcHHHHHHHHHhhhccccccHH------------HhcC---hhhccccCHHHHHHHHHHHHHHcCCCccc
Confidence 99999997543221110000 00000000 0000 00011122367788999999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001143 1119 RPTAGDLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~ 1133 (1141)
|||+.|+++++....
T Consensus 300 Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 300 RPSMGDVLWKLEYAL 314 (321)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHh
Confidence 999999999998653
No 193
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-36 Score=345.05 Aligned_cols=267 Identities=24% Similarity=0.364 Sum_probs=196.1
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC--CCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL--RHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L--~HpNIVkllg~~~~~~~ 883 (1141)
++|++.++||+|+||.||+|++.+..||+|++... . ...+ .+|.+++..+ +||||+++++++.....
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~------~-~~~~----~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 105 (337)
T 3mdy_A 37 KQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTT------E-EASW----FRETEIYQTVLMRHENILGFIAADIKGTG 105 (337)
T ss_dssp HHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGG------G-HHHH----HHHHHHHTSTTCCCTTBCCEEEEEEESCG
T ss_pred cceEEEeEeecCCCeEEEEEEECCceEEEEEEecc------c-cchh----hhHHHHHHHHhhcCCCeeeEEEEEccCCC
Confidence 46999999999999999999999999999986422 1 1111 4566666554 89999999999876421
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCC
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK--------HIMHRDIK 955 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~--------gIvHrDLK 955 (1141)
.....++||||+++++|.++++. ..+++..++.++.||+.||.|||++ ||+|||||
T Consensus 106 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dik 169 (337)
T 3mdy_A 106 ----------SWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169 (337)
T ss_dssp ----------GGCEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCC
T ss_pred ----------CCCceEEEEeccCCCcHHHHhhc------cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccc
Confidence 12356999999999999999976 3699999999999999999999998 99999999
Q ss_pred CCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC--CCchhhHH
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL--YGLEVDIW 1033 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~--~s~ksDVW 1033 (1141)
|+|||++.+ +.+||+|||+++.+....... ........||+.|+|||++.+...... ++.++|||
T Consensus 170 p~Nill~~~-------~~~kl~Dfg~a~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw 236 (337)
T 3mdy_A 170 SKNILVKKN-------GTCCIADLGLAVKFISDTNEV------DIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMY 236 (337)
T ss_dssp GGGEEECTT-------SCEEECCCTTCEECC---------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHH
T ss_pred hHHEEECCC-------CCEEEEeCCCceeeccccccc------cCCCCCCccCcceeChhhcccccCCccccCccccchH
Confidence 999999887 789999999997654322110 111224569999999999976321111 01249999
Q ss_pred HHHHHHHHHHhC----------CCCCCCCC-----HHHHHHHHH-hCCCCCchhHHhhhccCccccccccCCCCCCchhh
Q 001143 1034 SYGCLLLELLTL----------QVPYMGLS-----ELEIHDLIQ-MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1097 (1141)
Q Consensus 1034 SLGviL~ELLTG----------k~Pf~~~~-----~~el~~~I~-~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1141)
||||++|||++| +.||.... .......+. ....+..+.. ...
T Consensus 237 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~ 294 (337)
T 3mdy_A 237 SFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNR----------------------WSS 294 (337)
T ss_dssp HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGG----------------------GGG
T ss_pred HHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCcccccc----------------------chh
Confidence 999999999999 66665321 122222221 1111111111 011
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1098 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1098 ~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
..+++.+.+++.+||+.||.+|||+.|+++++.....
T Consensus 295 ~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~ 331 (337)
T 3mdy_A 295 DECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSE 331 (337)
T ss_dssp SHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHh
Confidence 2677889999999999999999999999999977543
No 194
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.9e-37 Score=341.12 Aligned_cols=253 Identities=23% Similarity=0.382 Sum_probs=203.5
Q ss_pred CCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.++|++.+.||+|+||.||+|.+.+ ..+|+|+.... ... .+. +.+|+.++++++||||+++++++.+..
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~---~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~- 81 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG--SMS---PDA----FLAEANLMKQLQHQRLVRLYAVVTQEP- 81 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTT--SSC---HHH----HHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCC--ccc---HHH----HHHHHHHHHhCCCcCcceEEEEEcCCC-
Confidence 4679999999999999999999864 46888875422 111 223 379999999999999999999876422
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.++||||+++++|.+++... ....+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 82 --------------~~~v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~ 144 (279)
T 1qpc_A 82 --------------IYIITEYMENGSLVDFLKTP---SGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSD 144 (279)
T ss_dssp --------------CEEEEECCTTCBHHHHTTSH---HHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECT
T ss_pred --------------cEEEEecCCCCCHHHHHhcC---CCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcC
Confidence 38999999999999998642 1125899999999999999999999999999999999999987
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||.+......... ......+++.|+|||++.+ ..++.++||||||+++|+|+
T Consensus 145 ~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~el~ 204 (279)
T 1qpc_A 145 T-------LSCKIADFGLARLIEDNEYT---------AREGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTEIV 204 (279)
T ss_dssp T-------SCEEECCCTTCEECSSSCEE---------CCTTCCCCTTTSCHHHHHH----CEECHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEECCCcccccccCcccc---------cccCCCCccCccChhhhcc----CCCCchhhhHHHHHHHHHHH
Confidence 7 78999999999765432211 1123347889999999976 45789999999999999999
Q ss_pred h-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1044 T-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1044 T-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
+ |+.||.+....+....+..+..+..+ ...+..+.+++.+||..||++|||+
T Consensus 205 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~~~p~~Rps~ 257 (279)
T 1qpc_A 205 THGRIPYPGMTNPEVIQNLERGYRMVRP---------------------------DNCPEELYQLMRLCWKERPEDRPTF 257 (279)
T ss_dssp TTTCCSSTTCCHHHHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred hCCCCCCcccCHHHHHHHHhcccCCCCc---------------------------ccccHHHHHHHHHHhccChhhCCCH
Confidence 9 99999988777776666544332211 1445679999999999999999999
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.++++.+..
T Consensus 258 ~~l~~~l~~ 266 (279)
T 1qpc_A 258 DYLRSVLED 266 (279)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999987754
No 195
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=6.9e-37 Score=348.22 Aligned_cols=262 Identities=23% Similarity=0.339 Sum_probs=203.5
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCcccee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMY 875 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkll 875 (1141)
...+|++.+.||+|+||.||+|.+.. ..+|+|+.... ......+. +.+|+.+++++ +||||++++
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~h~~iv~~~ 116 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKST---AHADEKEA----LMSELKIMSHLGQHENIVNLL 116 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCEE
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccc---cChHHHHH----HHHHHHHHHhhcCCCCeeeEE
Confidence 45789999999999999999999843 25777775322 12233333 48999999999 899999999
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc---------CCCCCCHHHHHHHHHHHHHHHHHHHH
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET---------GEKHVSVKLALFIAQDVAAALVELHS 946 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~---------~~~~Ls~~~i~~Ia~QIa~gL~yLHs 946 (1141)
+++.+.+.. ++||||+++|+|.+++...... ....+++..++.++.||+.||.|||+
T Consensus 117 ~~~~~~~~~--------------~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 182 (333)
T 2i1m_A 117 GACTHGGPV--------------LVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS 182 (333)
T ss_dssp EEECSSSSC--------------EEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCce--------------EEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc
Confidence 999865543 9999999999999999764321 12358999999999999999999999
Q ss_pred CCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCC
Q 001143 947 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLY 1026 (1141)
Q Consensus 947 ~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~ 1026 (1141)
+||+||||||+|||++.+ +.+||+|||++......... .......+|+.|+|||++.+ ..+
T Consensus 183 ~~ivH~Dlkp~NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~----~~~ 243 (333)
T 2i1m_A 183 KNCIHRDVAARNVLLTNG-------HVAKIGDFGLARDIMNDSNY--------IVKGNARLPVKWMAPESIFD----CVY 243 (333)
T ss_dssp TTEECSCCSGGGCEEEGG-------GEEEBCCCGGGCCGGGCTTS--------EECSSCEECGGGSCHHHHHH----CCC
T ss_pred CCcccCCcccceEEECCC-------CeEEECccccccccccccce--------eecCCCCCCccccCHHHhcc----CCC
Confidence 999999999999999987 78999999999765432211 01123457889999999886 568
Q ss_pred CchhhHHHHHHHHHHHHh-CCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHH
Q 001143 1027 GLEVDIWSYGCLLLELLT-LQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1104 (1141)
Q Consensus 1027 s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1104 (1141)
+.++|||||||++|+|++ |..||.+....... ..+.....+..+ ...+..+
T Consensus 244 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l 296 (333)
T 2i1m_A 244 TVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP---------------------------AFAPKNI 296 (333)
T ss_dssp CHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCCCCC---------------------------TTCCHHH
T ss_pred ChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhcCCCCCCC---------------------------CCCCHHH
Confidence 899999999999999999 99999875543333 332322221111 1345679
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1105 VDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1105 ~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.+++.+||+.||.+|||+.|+++++...
T Consensus 297 ~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 297 YSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 9999999999999999999999988654
No 196
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.6e-38 Score=369.42 Aligned_cols=270 Identities=13% Similarity=0.109 Sum_probs=191.4
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHH---HHhhCCCCCcccee----
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR---MLGALRHSCIVEMY---- 875 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~---iL~~L~HpNIVkll---- 875 (1141)
..+|++.+.||+|+||.||+|++ .+..||+|+....... .....+. +.+|+. ++++++|||||+++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~-~~~~~~~----~~~E~~~l~~l~~l~hpniv~~~~~~~ 146 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERP-PSNAIKQ----MKEEVLRLRLLRGIKNQKQAKVHLRFI 146 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-C-CTTHHHH----HHHHHHGGGGSTTCCSHHHHHHHHCBC
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeecccc-chHHHHH----HHHHHHHHHhccccCCHHHHHHHhhhh
Confidence 45799999999999999999996 4778999986543221 1222333 378994 55555799999998
Q ss_pred ---eeEecCCCC---CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 001143 876 ---GHKISSKWL---PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET--GEKHVSVKLALFIAQDVAAALVELHSK 947 (1141)
Q Consensus 876 ---g~~~~~~~~---~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~--~~~~Ls~~~i~~Ia~QIa~gL~yLHs~ 947 (1141)
+++...+.. ....++........|+||||+ +|+|.+++...... ....+++..++.|+.||+.||+|||++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 225 (377)
T 3byv_A 147 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 225 (377)
T ss_dssp CCSEEEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhhhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC
Confidence 444432110 000001111122468999999 58999999863221 113455688889999999999999999
Q ss_pred CccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc------
Q 001143 948 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH------ 1021 (1141)
Q Consensus 948 gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------ 1021 (1141)
||+||||||+|||++.+ +.+||+|||+|+...... ....| +.|+|||++.+..
T Consensus 226 ~ivHrDikp~NIll~~~-------~~~kL~DFG~a~~~~~~~-------------~~~~g-~~y~aPE~~~~~~~~~~~~ 284 (377)
T 3byv_A 226 GLVHTYLRPVDIVLDQR-------GGVFLTGFEHLVRDGARV-------------VSSVS-RGFEPPELEARRATISYHR 284 (377)
T ss_dssp TEECSCCCGGGEEECTT-------CCEEECCGGGCEETTCEE-------------ECCCC-TTCCCHHHHHHHTSTHHHH
T ss_pred CeecCCCCHHHEEEcCC-------CCEEEEechhheecCCcc-------------cCCCC-cCccChhhhcccccccccc
Confidence 99999999999999987 789999999997533211 13357 9999999998720
Q ss_pred -CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhh
Q 001143 1022 -KPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELET 1100 (1141)
Q Consensus 1022 -~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1100 (1141)
....++.++|||||||++|||++|+.||.+....+....+... . ...
T Consensus 285 ~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~-----------------------~---------~~~ 332 (377)
T 3byv_A 285 DRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRS-----------------------C---------KNI 332 (377)
T ss_dssp CCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGSS-----------------------C---------CCC
T ss_pred cccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhhh-----------------------c---------cCC
Confidence 0015789999999999999999999999754322111111000 0 144
Q ss_pred HHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1101 LSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1101 ~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
++.+.+||.+||+.||.+|||+.|+++|+|+..
T Consensus 333 ~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~ 365 (377)
T 3byv_A 333 PQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQ 365 (377)
T ss_dssp CHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHH
T ss_pred CHHHHHHHHHHcCCCchhCCCHHHHhhChHHHH
Confidence 567999999999999999999999999999864
No 197
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.7e-37 Score=358.41 Aligned_cols=262 Identities=22% Similarity=0.338 Sum_probs=193.8
Q ss_pred CCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~---~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
..|++.++||+|+||.||+|.+. +..+.++++.++... .....+.+ .+|+.++++++||||+++++++....
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~----~~E~~il~~l~hpnIv~~~~~~~~~~ 163 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRIT-DIGEVSQF----LTEGIIMKDFSHPNVLSLLGICLRSE 163 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCS-CSHHHHHH----HHHHTTSTTCCCTTBCCCCEEECCCS
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCC-CHHHHHHH----HHHHHHHHhCCCCCcceEEEEEEcCC
Confidence 34789999999999999999873 233444444444322 22333444 89999999999999999999875432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. ..++||||+++++|.++++. ....+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 164 ~-------------~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~ 226 (373)
T 3c1x_A 164 G-------------SPLVVLPYMKHGDLRNFIRN----ETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD 226 (373)
T ss_dssp S-------------CCEEEEECCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC
T ss_pred C-------------CeEEEEECCCCCCHHHHHhh----cccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEEC
Confidence 1 23899999999999999975 234689999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++.+....... ........+|+.|+|||++.+ ..++.++|||||||++|||
T Consensus 227 ~~-------~~~kL~DFG~a~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~----~~~~~~~DvwSlG~il~el 289 (373)
T 3c1x_A 227 EK-------FTVKVADFGLARDMYDKEFDS------VHNKTGAKLPVKWMALESLQT----QKFTTKSDVWSFGVLLWEL 289 (373)
T ss_dssp TT-------CCEEECCC---------------------------CCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CCEEEeecccccccccccccc------ccccCCCCCcccccChHHhcC----CCCCcHHHHHHHHHHHHHH
Confidence 87 789999999997654321110 011123457889999999986 5688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |.+||......+....+..+..+..+ ..++..+.+++.+||+.||++|||
T Consensus 290 lt~~~~p~~~~~~~~~~~~~~~~~~~~~p---------------------------~~~~~~l~~li~~cl~~dp~~RPs 342 (373)
T 3c1x_A 290 MTRGAPPYPDVNTFDITVYLLQGRRLLQP---------------------------EYCPDPLYEVMLKCWHPKAEMRPS 342 (373)
T ss_dssp HTTSCCSCTTSCSSCHHHHHHTTCCCCCC---------------------------TTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCcCCCCCCCCHHHHHHHHHcCCCCCCC---------------------------CCCCHHHHHHHHHHcCCChhhCcC
Confidence 99 78888766555555555444332211 145567999999999999999999
Q ss_pred HHHHHHHHHhhc
Q 001143 1122 AGDLYEMFVART 1133 (1141)
Q Consensus 1122 a~ElL~~L~~~~ 1133 (1141)
+.|+++++....
T Consensus 343 ~~ell~~L~~i~ 354 (373)
T 3c1x_A 343 FSELVSRISAIF 354 (373)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999987654
No 198
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=4.7e-37 Score=342.55 Aligned_cols=263 Identities=25% Similarity=0.356 Sum_probs=198.7
Q ss_pred CCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.+++|.....||+|+||.||+|.+. +..||+|+.... . ....+. +.+|+.++++++||||+++++++...
T Consensus 20 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~--~~~~~~----~~~e~~~l~~l~h~~iv~~~~~~~~~ 91 (295)
T 2clq_A 20 EYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPER--D--SRYSQP----LHEEIALHKHLKHKNIVQYLGSFSEN 91 (295)
T ss_dssp CBCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECC--C--C---HH----HHHHHHHHHTCCCTTBCCEEEEEEET
T ss_pred cccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCC--c--hHHHHH----HHHHHHHHHhCCCCCEeeEeeEEEeC
Confidence 3455666679999999999999984 455677764322 1 122233 37999999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+ ..++||||+++++|.+++... .+...+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 92 ~--------------~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~ 155 (295)
T 2clq_A 92 G--------------FIKIFMEQVPGGSLSALLRSK--WGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLI 155 (295)
T ss_dssp T--------------EEEEEEECCSEEEHHHHHHHT--TCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE
T ss_pred C--------------cEEEEEEeCCCCCHHHHHHhh--ccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEE
Confidence 4 349999999999999999762 223457899999999999999999999999999999999999
Q ss_pred ec-ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 962 DL-ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 962 d~-~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
+. + +.+||+|||++........ ......||+.|+|||++.+.. ..++.++||||||+++|
T Consensus 156 ~~~~-------~~~kl~Dfg~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~--~~~~~~~Di~slG~il~ 216 (295)
T 2clq_A 156 NTYS-------GVLKISDFGTSKRLAGINP----------CTETFTGTLQYMAPEIIDKGP--RGYGKAADIWSLGCTII 216 (295)
T ss_dssp ETTT-------CCEEECCTTTCEESCC---------------CCCCCCGGGCCHHHHHHGG--GGCSHHHHHHHHHHHHH
T ss_pred ECCC-------CCEEEeecccccccCCCCC----------cccccCCCccccChhhhcCCC--CCCCcHHHHHHHHHHHH
Confidence 87 4 7899999999976543211 112346899999999987521 23679999999999999
Q ss_pred HHHhCCCCCCCCCHHH-H-HHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1041 ELLTLQVPYMGLSELE-I-HDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~e-l-~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|++|+.||....... . .........+.++ ...+..+.+++.+||+.||++
T Consensus 217 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~li~~~l~~dp~~ 269 (295)
T 2clq_A 217 EMATGKPPFYELGEPQAAMFKVGMFKVHPEIP---------------------------ESMSAEAKAFILKCFEPDPDK 269 (295)
T ss_dssp HHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCC---------------------------TTSCHHHHHHHHHTTCSSTTT
T ss_pred HHHHCCCCccCCCchhHHHHhhcccccccccc---------------------------ccCCHHHHHHHHHHccCChhh
Confidence 9999999997543222 1 1111111111111 145567999999999999999
Q ss_pred CCCHHHHHHHHHhhcCCC
Q 001143 1119 RPTAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~s~ 1136 (1141)
|||+.++++|+|+.....
T Consensus 270 Rps~~~ll~~~~~~~~~~ 287 (295)
T 2clq_A 270 RACANDLLVDEFLKVSSK 287 (295)
T ss_dssp SCCHHHHHTSGGGCC---
T ss_pred CCCHHHHhcChhhhhccc
Confidence 999999999999986544
No 199
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=6e-37 Score=348.42 Aligned_cols=274 Identities=23% Similarity=0.353 Sum_probs=202.2
Q ss_pred CCCCceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeee
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGH 877 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~ 877 (1141)
...+|++.+.||+|+||.||+|++ .+..+|+|+.... .....+. +.+|+.++++++||||++++++
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~----~~~E~~~l~~l~h~~i~~~~~~ 92 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS----GPDQQRD----FQREIQILKALHSDFIVKYRGV 92 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC----CHHHHHH----HHHHHHHHHTCCCTTBCCEEEE
T ss_pred chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC----CHHHHHH----HHHHHHHHHhcCCCceeEEEEE
Confidence 346799999999999999999995 3556777765321 2333333 4899999999999999999999
Q ss_pred EecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 878 KISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 878 ~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
+..... ...++||||+++++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+
T Consensus 93 ~~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~ 156 (327)
T 3lxl_A 93 SYGPGR------------QSLRLVMEYLPSGCLRDFLQRH----RARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAAR 156 (327)
T ss_dssp EECSSS------------CEEEEEEECCTTCBHHHHHHHH----GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGG
T ss_pred EecCCC------------ceEEEEEeecCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChh
Confidence 874321 2469999999999999999763 235999999999999999999999999999999999
Q ss_pred CeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHH
Q 001143 958 NILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGC 1037 (1141)
Q Consensus 958 NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGv 1037 (1141)
|||++.+ +.+||+|||++........... ......||+.|+|||++.+ ..++.++|||||||
T Consensus 157 NIl~~~~-------~~~kl~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~ 218 (327)
T 3lxl_A 157 NILVESE-------AHVKIADFGLAKLLPLDKDYYV-------VREPGQSPIFWYAPESLSD----NIFSRQSDVWSFGV 218 (327)
T ss_dssp GEEEEET-------TEEEECCGGGCEECCTTCSEEE-------CSSCCCSCGGGSCHHHHHH----CEEEHHHHHHHHHH
T ss_pred hEEECCC-------CCEEEcccccceecccCCccce-------eeccCCccccccCHHHhcc----CCCChHHhHHHHHH
Confidence 9999887 8899999999986543221110 1123458889999999976 45789999999999
Q ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1038 LLLELLTLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1038 iL~ELLTGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
++|+|++|+.||...... ....... ...+......... ...... .....+++.+.+++.+||+.||
T Consensus 219 il~~ll~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---------~~~~~~---~~~~~~~~~l~~li~~~l~~dP 285 (327)
T 3lxl_A 219 VLYELFTYCDKSCSPSAE-FLRMMGCERDVPALSRLLELL---------EEGQRL---PAPPACPAEVHELMKLCWAPSP 285 (327)
T ss_dssp HHHHHHTTTCGGGSHHHH-HHHHCC----CCHHHHHHHHH---------HTTCCC---CCCTTCCHHHHHHHHHHTCSSG
T ss_pred HHHHHHhCCCCCccccch-hhhhcccccccccHHHHHHHh---------hcccCC---CCCCcccHHHHHHHHHHcCCCh
Confidence 999999999998753221 1111100 0000000000000 000000 0112566789999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001143 1117 TERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~ 1132 (1141)
.+|||+.|+++++...
T Consensus 286 ~~Rps~~ell~~L~~~ 301 (327)
T 3lxl_A 286 QDRPSFSALGPQLDML 301 (327)
T ss_dssp GGSCCHHHHHHHHHHC
T ss_pred hhCcCHHHHHHHHHHH
Confidence 9999999999988765
No 200
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=7.7e-37 Score=346.12 Aligned_cols=287 Identities=21% Similarity=0.235 Sum_probs=207.7
Q ss_pred CCCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC---CCCCccceeeeE
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL---RHSCIVEMYGHK 878 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~---~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpNIVkllg~~ 878 (1141)
..+|++.+.||+|+||.||+|++. +..||+|+......... .... +.+|+.+++.+ +||||+++++++
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~--~~~~----~~~e~~~l~~l~~~~h~~i~~~~~~~ 83 (326)
T 1blx_A 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEG--MPLS----TIREVAVLRHLETFEHPNVVRLFDVC 83 (326)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTS--CBCT----HHHHHHHHHHHHHTCCTTBCCEEEEE
T ss_pred hhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCccccc--CCch----hhHHHHHHHhhhccCCCCeEeeeeee
Confidence 367999999999999999999983 56788888654432111 1112 25677777666 899999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
..... ......++||||++ ++|.+++.. .....+++..+..++.||+.||.|||++||+||||||+|
T Consensus 84 ~~~~~---------~~~~~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~N 150 (326)
T 1blx_A 84 TVSRT---------DRETKLTLVFEHVD-QDLTTYLDK---VPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 150 (326)
T ss_dssp EEEEC---------SSEEEEEEEEECCS-CBHHHHHHH---SCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred eeccc---------CCCceEEEEEecCC-CCHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHH
Confidence 73210 01235699999998 699999976 233459999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
|+++.+ +.+||+|||++........ .....||+.|+|||++.+ ..++.++|||||||+
T Consensus 151 ili~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 208 (326)
T 1blx_A 151 ILVTSS-------GQIKLADFGLARIYSFQMA-----------LTSVVVTLWYRAPEVLLQ----SSYATPVDLWSVGCI 208 (326)
T ss_dssp EEECTT-------CCEEECSCCSCCCCCGGGG-----------GCCCCCCCTTCCHHHHTT----CCCCTHHHHHHHHHH
T ss_pred eEEcCC-------CCEEEecCcccccccCCCC-----------ccccccccceeCHHHHhc----CCCCcchhHHHHHHH
Confidence 999887 7899999999976543211 123468999999999976 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhC-CCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMG-KRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~-~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|+|++|+.||.+....+....+... ..+... .+....... ...................+..+.+|+.+||..||.
T Consensus 209 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 286 (326)
T 1blx_A 209 FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE-DWPRDVALP-RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPA 286 (326)
T ss_dssp HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGG-GSCTTCSSC-GGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTT
T ss_pred HHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcc-cCccccccc-hhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcc
Confidence 99999999999987776665555321 111111 100000000 000000000001111225677899999999999999
Q ss_pred CCCCHHHHHHHHHhhcC
Q 001143 1118 ERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~~ 1134 (1141)
+|||+.|+++|+|+...
T Consensus 287 ~Rpt~~e~l~hp~~~~~ 303 (326)
T 1blx_A 287 KRISAYSALSHPYFQDL 303 (326)
T ss_dssp TSCCHHHHHTSGGGTTC
T ss_pred cCCCHHHHhcCcccccc
Confidence 99999999999999743
No 201
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=8.7e-37 Score=341.94 Aligned_cols=273 Identities=23% Similarity=0.329 Sum_probs=197.9
Q ss_pred CCceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
..|++.++||+|+||.||+|++ .+..+|+|+..... .....+ .+.+|+.++++++||||+++++++.
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~----~~~~E~~~l~~l~h~~i~~~~~~~~ 93 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES---GGNHIA----DLKKEIEILRNLYHENIVKYKGICT 93 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC--------CCHH----HHHHHHHHHHTCCCTTBCCEEEEEE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc---cchhHH----HHHHHHHHHHhCCCCCeeeeeeEEe
Confidence 3489999999999999999995 46678888764332 111122 3479999999999999999999988
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.... ...++||||+++++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+||
T Consensus 94 ~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Ni 157 (302)
T 4e5w_A 94 EDGG------------NGIKLIMEFLPSGSLKEYLPKN----KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNV 157 (302)
T ss_dssp C---------------CCEEEEEECCTTCBHHHHHHHH----TTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred cCCC------------ceEEEEEEeCCCCcHHHHHHhc----cccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheE
Confidence 6421 1458999999999999999652 24699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+++.+ +.+||+|||++.......... .......||..|+|||++.+ ..++.++||||||+++
T Consensus 158 l~~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 219 (302)
T 4e5w_A 158 LVESE-------HQVKIGDFGLTKAIETDKEYY-------TVKDDRDSPVFWYAPECLMQ----SKFYIASDVWSFGVTL 219 (302)
T ss_dssp EEEET-------TEEEECCCTTCEECCTTCCEE-------ECCCCTTCCGGGCCHHHHHH----CEEEHHHHHHHHHHHH
T ss_pred EEcCC-------CCEEECcccccccccCCCcce-------eccCCCCCCccccCCeeecC----CCCCcchhHHHHHHHH
Confidence 99887 789999999997654432110 11223458889999999976 4577999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|..|+.. ................. .... .. ......... .....++.+.+++.+||+.||.+|
T Consensus 220 ~~l~~g~~p~~~--~~~~~~~~~~~~~~~~~--~~~~----~~-~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~R 287 (302)
T 4e5w_A 220 HELLTYCDSDSS--PMALFLKMIGPTHGQMT--VTRL----VN-TLKEGKRLP---CPPNCPDEVYQLMRKCWEFQPSNR 287 (302)
T ss_dssp HHHHTTTCGGGS--HHHHHHHHHCSCCGGGH--HHHH----HH-HHHTTCCCC---CCTTCCHHHHHHHHHTTCSSGGGS
T ss_pred HHHHHccCCCcc--hhhHHhhccCCcccccC--HHHH----HH-HHhccCCCC---CCCCCCHHHHHHHHHHcCCCCCCC
Confidence 999999998753 22111111111000000 0000 00 000000000 112556789999999999999999
Q ss_pred CCHHHHHHHHHh
Q 001143 1120 PTAGDLYEMFVA 1131 (1141)
Q Consensus 1120 PSa~ElL~~L~~ 1131 (1141)
||+.++++.+..
T Consensus 288 ps~~~ll~~L~~ 299 (302)
T 4e5w_A 288 TSFQNLIEGFEA 299 (302)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999998864
No 202
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=3.8e-37 Score=349.35 Aligned_cols=274 Identities=21% Similarity=0.260 Sum_probs=203.4
Q ss_pred CCCCceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
...+|++.+.||+|+||.||+|++ .+..+|+|+...... .... ..+.+|+.++++++||||+++++++....
T Consensus 28 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~---~~~~----~~~~~e~~~l~~l~h~~iv~~~~~~~~~~ 100 (326)
T 3uim_A 28 ASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERT---QGGE----LQFQTEVEMISMAVHRNLLRLRGFCMTPT 100 (326)
T ss_dssp TTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC--------CC----CHHHHHHHGGGTCCCTTBCCCCEEECCSS
T ss_pred HhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccC---chHH----HHHHHHHHHHHhccCCCccceEEEEecCC
Confidence 346799999999999999999987 467788887543211 1111 13479999999999999999999998655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCCCCe
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---HIMHRDIKSENI 959 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~---gIvHrDLKP~NI 959 (1141)
.. ++||||+++++|.+++.... .....+++..+..|+.||+.||.|||++ ||+||||||+||
T Consensus 101 ~~--------------~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Ni 165 (326)
T 3uim_A 101 ER--------------LLVYPYMANGSVASCLRERP-ESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANI 165 (326)
T ss_dssp CC--------------EEEEECCTTCBHHHHHHCCS-TTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGE
T ss_pred ce--------------EEEEEeccCCCHHHHHHhcc-ccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhE
Confidence 43 89999999999999998632 2234699999999999999999999999 999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||++......... ......||+.|+|||++.+ ..++.++|||||||++
T Consensus 166 l~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 225 (326)
T 3uim_A 166 LLDEE-------FEAVVGDFGLAKLMDYKDTH---------VTTAVRGTIGHIAPEYLST----GKSSEKTDVFGYGVML 225 (326)
T ss_dssp EECTT-------CCEEECCCSSCEECCSSSSC---------EECCCCSCGGGCCHHHHHH----SEECHHHHHHHHHHHH
T ss_pred EECCC-------CCEEeccCccccccCccccc---------ccccccCCcCccCHHHhcc----CCCCccccchhHHHHH
Confidence 99887 78999999999765432211 1123458999999999976 4578999999999999
Q ss_pred HHHHhCCCCCCCC-----CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhccc
Q 001143 1040 LELLTLQVPYMGL-----SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEE 1114 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~-----~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~ 1114 (1141)
|+|++|+.||... ........+......... ..... ...........+..+.+++.+||+.
T Consensus 226 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~---~~~~~~~~~~~~~~l~~li~~cl~~ 291 (326)
T 3uim_A 226 LELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKL-----------EALVD---VDLQGNYKDEEVEQLIQVALLCTQS 291 (326)
T ss_dssp HHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCS-----------TTSSC---TTCTTSCCHHHHHHHHHHHHHHTCS
T ss_pred HHHHhCCCcccccccccccchhHHHHHHHHhhchhh-----------hhhcC---hhhccccCHHHHHHHHHHHHHHhCc
Confidence 9999999999521 000011111110000000 00000 0001112236678899999999999
Q ss_pred CCCCCCCHHHHHHHHHhhc
Q 001143 1115 NPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1115 DP~~RPSa~ElL~~L~~~~ 1133 (1141)
||.+|||+.||+++++...
T Consensus 292 dP~~Rps~~ell~~L~~~~ 310 (326)
T 3uim_A 292 SPMERPKMSEVVRMLEGDG 310 (326)
T ss_dssp CGGGSCCHHHHHHHHHTSS
T ss_pred CCccCCCHHHHHHHhcCcc
Confidence 9999999999999998654
No 203
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=7.2e-37 Score=344.51 Aligned_cols=262 Identities=23% Similarity=0.361 Sum_probs=203.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC-------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg 876 (1141)
..+|++.+.||+|+||.||+|++. +..+|+|+.... ......+. +.+|+.++.++ +||||+++++
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~~hp~iv~~~~ 98 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG---ATHSEHRA----LMSELKILIHIGHHLNVVNLLG 98 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHHCCCTTBCCEEE
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC---CCcHHHHH----HHHHHHHHHhcccCCCeeeEEE
Confidence 467999999999999999999862 356777775422 22233333 48999999999 6999999999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc-----------CCCCCCHHHHHHHHHHHHHHHHHHH
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET-----------GEKHVSVKLALFIAQDVAAALVELH 945 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~-----------~~~~Ls~~~i~~Ia~QIa~gL~yLH 945 (1141)
++...+. ..++||||+++++|.+++...... ....+++..++.++.||+.||.|||
T Consensus 99 ~~~~~~~-------------~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 165 (316)
T 2xir_A 99 ACTKPGG-------------PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA 165 (316)
T ss_dssp EECCTTS-------------CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCC-------------ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH
Confidence 9875432 249999999999999999762210 0123899999999999999999999
Q ss_pred HCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCC
Q 001143 946 SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNL 1025 (1141)
Q Consensus 946 s~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 1025 (1141)
++||+||||||+||+++.+ +.+||+|||+++........ .......||+.|+|||++.+ ..
T Consensus 166 ~~~i~H~dikp~Nil~~~~-------~~~kl~Dfg~~~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~----~~ 226 (316)
T 2xir_A 166 SRKCIHRDLAARNILLSEK-------NVVKICDFGLARDIYKDPDY--------VRKGDARLPLKWMAPETIFD----RV 226 (316)
T ss_dssp HTTCCCSCCSGGGEEECGG-------GCEEECCCGGGSCTTTCTTS--------EEETTEEECGGGCCHHHHHH----CC
T ss_pred hCCcccccCccceEEECCC-------CCEEECCCccccccccCccc--------eeccCCCcceeecCchhhcc----cc
Confidence 9999999999999999887 78999999999765432111 01123457889999999976 56
Q ss_pred CCchhhHHHHHHHHHHHHh-CCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHH
Q 001143 1026 YGLEVDIWSYGCLLLELLT-LQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSF 1103 (1141)
Q Consensus 1026 ~s~ksDVWSLGviL~ELLT-Gk~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1141)
++.++|||||||++|+|++ |..||.+.... .....+..+.....+. ..++.
T Consensus 227 ~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~ 279 (316)
T 2xir_A 227 YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPD---------------------------YTTPE 279 (316)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCCCCCT---------------------------TCCHH
T ss_pred ccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhccCccCCCCC---------------------------CCCHH
Confidence 8899999999999999998 99999765432 3344444433222111 34567
Q ss_pred HHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1104 LVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1104 L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
+.+++.+||+.||.+|||+.|+++++...
T Consensus 280 l~~li~~~l~~dp~~Rps~~ell~~L~~~ 308 (316)
T 2xir_A 280 MYQTMLDCWHGEPSQRPTFSELVEHLGNL 308 (316)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 99999999999999999999999998764
No 204
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=9.5e-37 Score=337.85 Aligned_cols=261 Identities=22% Similarity=0.290 Sum_probs=200.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|.+. +..+|+|+..... +.+ .+|+.++++++||||+++++++.....
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--------~~~----~~e~~~l~~l~h~~i~~~~~~~~~~~~ 78 (284)
T 2a19_B 11 MDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN--------EKA----EREVKALAKLDHVNIVHYNGCWDGFDY 78 (284)
T ss_dssp HHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS--------GGG----HHHHHHHHHCCCTTBCCEEEEEEEEEE
T ss_pred cccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc--------HHH----HHHHHHHHhCCCCCEEEEeeeEecccc
Confidence 46899999999999999999985 6778888765321 123 689999999999999999998865221
Q ss_pred CCCCC--CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 884 LPSAD--GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 884 ~~~~~--g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.+... ..........++||||+++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+||++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~ 155 (284)
T 2a19_B 79 DPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR---RGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFL 155 (284)
T ss_dssp C---------CCEEEEEEEEECCCCSCBHHHHHHHG---GGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CcccccccccccCcceEEEEEeccCCCCHHHHHhhc---cCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEE
Confidence 10000 00001233579999999999999999862 23469999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||++....... ......||+.|+|||++.+ ..++.++||||||+++|+
T Consensus 156 ~~~-------~~~kl~Dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 213 (284)
T 2a19_B 156 VDT-------KQVKIGDFGLVTSLKNDG-----------KRTRSKGTLRYMSPEQISS----QDYGKEVDLYALGLILAE 213 (284)
T ss_dssp EET-------TEEEECCCTTCEESSCCS-----------CCCCCCSCCTTSCHHHHHC----SCCCTHHHHHHHHHHHHH
T ss_pred cCC-------CCEEECcchhheeccccc-----------cccccCCcccccChhhhcc----CCCcchhhhHHHHHHHHH
Confidence 987 789999999987654321 1123458999999999976 567899999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|++|..||.. .......+.....+ ...+..+.+++.+||+.||.+|||
T Consensus 214 l~~~~~~~~~--~~~~~~~~~~~~~~------------------------------~~~~~~~~~li~~~l~~dp~~Rps 261 (284)
T 2a19_B 214 LLHVCDTAFE--TSKFFTDLRDGIIS------------------------------DIFDKKEKTLLQKLLSKKPEDRPN 261 (284)
T ss_dssp HHSCCSSHHH--HHHHHHHHHTTCCC------------------------------TTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhcCCcchh--HHHHHHHhhccccc------------------------------ccCCHHHHHHHHHHccCChhhCcC
Confidence 9999988742 12222222221110 034456899999999999999999
Q ss_pred HHHHHHHHHhhcCC
Q 001143 1122 AGDLYEMFVARTSS 1135 (1141)
Q Consensus 1122 a~ElL~~L~~~~~s 1135 (1141)
+.|++++++....+
T Consensus 262 ~~e~l~~l~~~~~~ 275 (284)
T 2a19_B 262 TSEILRTLTVWKKS 275 (284)
T ss_dssp HHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999987654
No 205
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-36 Score=336.86 Aligned_cols=258 Identities=22% Similarity=0.336 Sum_probs=200.8
Q ss_pred CceEeeeecccCceEEEEEEECC--c---cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 807 SLSSCDEAGKSVSSSLFRCKFGS--A---DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~~~--~---~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.|.+.++||+|+||+||+|.+.. . .+|+|+. .. .......+.+ .+|+.++++++||||+++++++.+.
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~--~~-~~~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~~~~ 94 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSL--SR-ITEMQQVEAF----LREGLLMRGLNHPNVLALIGIMLPP 94 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEE--TT-CCSHHHHHHH----HHHHHHHHTCCCTTBCCCCEEECCS
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeec--cc-cccHHHHHHH----HHHHHHHHhCCCCCeeeEEEEEecC
Confidence 46778999999999999998732 2 3566654 32 2223333444 7999999999999999999998754
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+. ..++||||+.+++|.+++.. ....+++..+..|+.||+.||.|||++||+||||||+||++
T Consensus 95 ~~-------------~~~~v~e~~~~~~L~~~~~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili 157 (298)
T 3pls_A 95 EG-------------LPHVLLPYMCHGDLLQFIRS----PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML 157 (298)
T ss_dssp SS-------------CCEEEECCCTTCBHHHHHHC----TTCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred CC-------------CcEEEEecccCCCHHHHHhc----cccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE
Confidence 32 23899999999999999975 23468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+++........ .........+|+.|+|||.+.+ ..++.++||||||+++|+
T Consensus 158 ~~~-------~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 220 (298)
T 3pls_A 158 DES-------FTVKVADFGLARDILDREYY------SVQQHRHARLPVKWTALESLQT----YRFTTKSDVWSFGVLLWE 220 (298)
T ss_dssp CTT-------CCEEECCTTSSCTTTTGGGG------CSCCSSCTTCGGGGSCHHHHTT----CCCCHHHHHHHHHHHHHH
T ss_pred cCC-------CcEEeCcCCCcccccCCccc------ccccCcCCCCCccccChhhhcc----CCCChhhchhhHHHHHHH
Confidence 887 78999999999765432211 1112234468899999999976 568899999999999999
Q ss_pred HHhC-CCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLTL-QVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLTG-k~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++| .+||......+....+........+. ..++.+.+++.+||+.||.+||
T Consensus 221 l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~~p~~Rp 273 (298)
T 3pls_A 221 LLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE---------------------------YCPDSLYQVMQQCWEADPAVRP 273 (298)
T ss_dssp HHHTSCCTTTTSCGGGHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred HhhCCCCCCccCCHHHHHHHhhcCCCCCCCc---------------------------cchHHHHHHHHHHccCChhhCc
Confidence 9994 55566656655666555444322211 3456799999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001143 1121 TAGDLYEMFVAR 1132 (1141)
Q Consensus 1121 Sa~ElL~~L~~~ 1132 (1141)
|+.++++.+...
T Consensus 274 s~~~ll~~l~~~ 285 (298)
T 3pls_A 274 TFRVLVGEVEQI 285 (298)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999988764
No 206
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=7.4e-37 Score=358.88 Aligned_cols=290 Identities=21% Similarity=0.257 Sum_probs=186.4
Q ss_pred ceE-eeeecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 808 LSS-CDEAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 808 y~i-~~~LG~GsfG~Vy~a~~~----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
|++ .++||+|+||+||+|++. +..+|+|+.. ..... . .+.+|+.++++++||||+++++++....
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~--~~~~~----~----~~~~E~~~l~~l~hpniv~~~~~~~~~~ 91 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIE--GTGIS----M----SACREIALLRELKHPNVISLQKVFLSHA 91 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECS--SSSCC----H----HHHHHHHHHHHCCCTTBCCCCEEEEETT
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEEC--CCCCC----H----HHHHHHHHHHhcCCCCeeeEeeEEecCC
Confidence 555 568999999999999974 4567777643 22111 1 2368999999999999999999986532
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSET----GEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~----~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
. ...++||||++ ++|.+++...... ....+++..++.|+.||+.||.|||++||+||||||+|
T Consensus 92 ~------------~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~N 158 (405)
T 3rgf_A 92 D------------RKVWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPAN 158 (405)
T ss_dssp T------------TEEEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGG
T ss_pred C------------CeEEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHH
Confidence 1 25699999997 6898888643321 12259999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||+..+. ...+.+||+|||+|+........ ........||+.|+|||++.+ ...++.++|||||||+
T Consensus 159 Ill~~~~---~~~~~~kl~Dfg~a~~~~~~~~~-------~~~~~~~~gt~~y~aPE~~~~---~~~~~~~~DiwSlG~i 225 (405)
T 3rgf_A 159 ILVMGEG---PERGRVKIADMGFARLFNSPLKP-------LADLDPVVVTFWYRAPELLLG---ARHYTKAIDIWAIGCI 225 (405)
T ss_dssp EEECCSS---TTTTCEEECCTTCCC-----------------------CCCTTCCHHHHTT---CCSCCHHHHHHHHHHH
T ss_pred eEEecCC---CCCCcEEEEECCCceecCCCCcc-------cccCCCceecCcccCchhhcC---CCcccchhhhHHHHHH
Confidence 9994320 11278999999999765432111 011224569999999999876 2358899999999999
Q ss_pred HHHHHhCCCCCCCCCH---------HHHHHHH-HhCCCCCchhHHhhhccCcccc-cc-ccC-CCCCCch-------hhh
Q 001143 1039 LLELLTLQVPYMGLSE---------LEIHDLI-QMGKRPRLTDELEALGSCHEHE-VA-QSG-SGFEKPE-------AEL 1098 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~---------~el~~~I-~~~~~p~l~~~l~~~~~~~~~~-~~-~~~-~~~~~~~-------~~~ 1098 (1141)
+|+|++|+.||.+... .+....+ .....+.... +.......... .. ... ..+.... ...
T Consensus 226 l~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (405)
T 3rgf_A 226 FAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKD-WEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKV 304 (405)
T ss_dssp HHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTT-CGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTC
T ss_pred HHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhh-cchhhcCcchhhhhhhccccCCCcchhhhhHhhcCC
Confidence 9999999999976443 1222222 2222221110 00000000000 00 000 0000000 000
Q ss_pred hhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1099 ETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1099 ~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
..+..+.+||.+||++||.+|||++|+++|+||...
T Consensus 305 ~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~ 340 (405)
T 3rgf_A 305 KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED 340 (405)
T ss_dssp CTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSS
T ss_pred CCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccC
Confidence 124568999999999999999999999999999764
No 207
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=6.9e-37 Score=351.88 Aligned_cols=282 Identities=19% Similarity=0.203 Sum_probs=204.2
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|.+.+.||+|+||.||+|.+. +..||+|+.. .........+ ++.+|+.++++++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 97 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLS--RPFQSEIFAK----RAYRELLLLKHMQHENVIGLLDVFTPASS 97 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEES--STTSSHHHHH----HHHHHHHHHHHCCCTTBCCCSEEECSCSS
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEec--ccccchHHHH----HHHHHHHHHHhcCCCCcccHhheEecccc
Confidence 57999999999999999999985 5667777643 2222322233 34799999999999999999999876542
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
. ......++||||++ ++|.+++. ..+++..+..++.||+.||.|||++||+||||||+||+++.
T Consensus 98 ~--------~~~~~~~lv~e~~~-~~l~~~~~-------~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~ 161 (353)
T 3coi_A 98 L--------RNFYDFYLVMPFMQ-TDLQKIMG-------LKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNE 161 (353)
T ss_dssp G--------GGCCCCEEEEECCS-EEGGGTTT-------SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECT
T ss_pred c--------ccceeEEEEecccc-CCHHHHhc-------CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECC
Confidence 2 12234599999997 68877653 25999999999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||++...... .....||+.|+|||++.+ ...++.++|||||||++|+|+
T Consensus 162 ~-------~~~kl~Dfg~~~~~~~~-------------~~~~~~t~~y~aPE~~~~---~~~~~~~~Di~slG~il~el~ 218 (353)
T 3coi_A 162 D-------CELKILDFGLARHADAE-------------MTGYVVTRWYRAPEVILS---WMHYNQTVDIWSVGCIMAEML 218 (353)
T ss_dssp T-------CCEEECSTTCTTC---------------------CCSBCCSCHHHHSC---CSCCCTTHHHHHHHHHHHHHH
T ss_pred C-------CcEEEeecccccCCCCC-------------ccccccCcCcCCHHHHhC---cCCCCchhhHHHHHHHHHHHH
Confidence 7 78999999999754321 123468999999999875 245789999999999999999
Q ss_pred hCCCCCCCCCHHHHHHHHHh-CCCCCchhHHhhhccCccccccc---cCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1044 TLQVPYMGLSELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQ---SGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|+.||.+.+..+....+.. ...+. ................+ ..............+..+.+||.+||+.||.+|
T Consensus 219 ~g~~pf~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R 297 (353)
T 3coi_A 219 TGKTLFKGKDYLDQLTQILKVTGVPG-TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR 297 (353)
T ss_dssp HSSCSSBSSCHHHHHHHHHHHHCBCC-HHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTS
T ss_pred hCCCCCCCCCHHHHHHHHHHHhCCCC-HHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccC
Confidence 99999998777666555532 12111 11110000000000000 000000111112567789999999999999999
Q ss_pred CCHHHHHHHHHhhc
Q 001143 1120 PTAGDLYEMFVART 1133 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~ 1133 (1141)
||+.|+++|+|+..
T Consensus 298 pt~~e~l~hp~f~~ 311 (353)
T 3coi_A 298 LTAAQALTHPFFEP 311 (353)
T ss_dssp CCHHHHHTSGGGTT
T ss_pred CCHHHHhcCcchhh
Confidence 99999999999974
No 208
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=8.2e-37 Score=353.21 Aligned_cols=279 Identities=14% Similarity=0.130 Sum_probs=199.9
Q ss_pred CCCceEeeeecccCceEEEEEEECC-------ccEEEEEEecccCCCChHHHHHh----HHhHHHHHHHHhhCCCCCccc
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS-------ADAAAKVRTLKVCGSSADEIRNF----EYSCLGEVRMLGALRHSCIVE 873 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~-------~~vAvKI~~l~~~~~~~~~~~~~----~~~~~~Ei~iL~~L~HpNIVk 873 (1141)
-.+|++.++||+|+||.||+|.+.. ..+|+|+....... ...+.+.+ ...+..|+..+..++||||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~-~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGP-LFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHH-HHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchh-HHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 4579999999999999999999843 57889886533110 00011100 112346777788889999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Q 001143 874 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRD 953 (1141)
Q Consensus 874 llg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrD 953 (1141)
+++++..... ...+.++||||+ |++|.+++.. ....+++..++.|+.||+.||.|||++||+|||
T Consensus 113 ~~~~~~~~~~----------~~~~~~lv~e~~-g~~L~~~~~~----~~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrD 177 (364)
T 3op5_A 113 YWGSGLHDKN----------GKSYRFMIMDRF-GSDLQKIYEA----NAKRFSRKTVLQLSLRILDILEYIHEHEYVHGD 177 (364)
T ss_dssp EEEEEEEEET----------TEEEEEEEEECE-EEEHHHHHHH----TTSCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred EEeeeeeccC----------CcceEEEEEeCC-CCCHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCeEEec
Confidence 9999876321 123569999999 8999999976 234699999999999999999999999999999
Q ss_pred CCCCCeeee--cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhh
Q 001143 954 IKSENILID--LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVD 1031 (1141)
Q Consensus 954 LKP~NILld--~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksD 1031 (1141)
|||+|||++ .+ +.+||+|||+++.+........ ..........||+.|+|||++.+ ..++.++|
T Consensus 178 lkp~Nill~~~~~-------~~~kl~DFG~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~D 243 (364)
T 3op5_A 178 IKASNLLLNYKNP-------DQVYLVDYGLAYRYCPEGVHKA---YAADPKRCHDGTIEFTSIDAHNG----VAPSRRGD 243 (364)
T ss_dssp CCGGGEEEESSCT-------TCEEECCCTTCEESSGGGCCCC---SSCCSSCCCCCCTTTCCHHHHTT----CCCCHHHH
T ss_pred CCHHHEEEecCCC-------CeEEEEECCcceecccCCcccc---cccCcccccCCCCCccCHHHhCC----CCCCchhh
Confidence 999999998 44 7899999999987654321110 01111234569999999999986 56899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001143 1032 IWSYGCLLLELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1110 (1141)
Q Consensus 1032 VWSLGviL~ELLTGk~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~ 1110 (1141)
||||||++|||++|+.||.+... ............+.+....... .. ....+.++.+++..
T Consensus 244 i~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~~li~~ 305 (364)
T 3op5_A 244 LEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKC--------FP----------AANAPGEIAKYMET 305 (364)
T ss_dssp HHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHH--------SC----------TTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHh--------cc----------cccCHHHHHHHHHH
Confidence 99999999999999999985322 2222222111111111111100 00 01446789999999
Q ss_pred hcccCCCCCCCHHHHHHHHHh
Q 001143 1111 CTEENPTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1111 cL~~DP~~RPSa~ElL~~L~~ 1131 (1141)
||..||.+||++.+|++.+..
T Consensus 306 cl~~~p~~RP~~~~l~~~l~~ 326 (364)
T 3op5_A 306 VKLLDYTEKPLYENLRDILLQ 326 (364)
T ss_dssp HHTCCTTCCCCHHHHHHHHHH
T ss_pred HhcCCCCCCCCHHHHHHHHHH
Confidence 999999999999999988754
No 209
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=9.6e-37 Score=339.41 Aligned_cols=264 Identities=22% Similarity=0.321 Sum_probs=198.0
Q ss_pred CCCCceEeeeecccCceEEEEEEEC---Cc--cEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFG---SA--DAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~---~~--~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
...+|++.+.||+|+||+||+|++. +. .+|+|+....... .....+ .+.+|+.++++++||||+++++++
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~-~~~~~~----~~~~e~~~l~~l~h~~i~~~~~~~ 90 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLS-QPEAMD----DFIREVNAMHSLDHRNLIRLYGVV 90 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC---------CHHHH----HHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccC-CHHHHH----HHHHHHHHHHhCCCCCcccEEEEE
Confidence 3467999999999999999999863 22 3566654322111 112223 348999999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
.... .++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 91 ~~~~---------------~~~v~e~~~~~~L~~~l~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~N 151 (291)
T 1u46_A 91 LTPP---------------MKMVTELAPLGSLLDRLRKH----QGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARN 151 (291)
T ss_dssp CSSS---------------CEEEEECCTTCBHHHHHHHH----GGGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred ccCC---------------ceeeEecccCCCHHHHHHhc----cCCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchhe
Confidence 7543 38999999999999999762 2358999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
|+++.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||++
T Consensus 152 ili~~~-------~~~kl~Dfg~~~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 213 (291)
T 1u46_A 152 LLLATR-------DLVKIGDFGLMRALPQNDDHY-------VMQEHRKVPFAWCAPESLKT----RTFSHASDTWMFGVT 213 (291)
T ss_dssp EEEEET-------TEEEECCCTTCEECCC-CCEE-------EC-----CCGGGCCHHHHHH----CEEEHHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEccccccccccccccch-------hhhccCCCCceeeCchhhcC----CCCCchhhHHHHHHH
Confidence 999887 789999999997654322110 01123457889999999976 457899999999999
Q ss_pred HHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|+|++ |+.||.+....+....+......... ....+..+.+++.+||..||.
T Consensus 214 l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~l~~li~~~l~~~p~ 267 (291)
T 1u46_A 214 LWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR--------------------------PEDCPQDIYNVMVQCWAHKPE 267 (291)
T ss_dssp HHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCC--------------------------CTTCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHhCCCCCcccCCHHHHHHHHHccCCCCCC--------------------------CcCcCHHHHHHHHHHccCCcc
Confidence 999999 99999988877776666443221100 014566799999999999999
Q ss_pred CCCCHHHHHHHHHhhcCC
Q 001143 1118 ERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~~s 1135 (1141)
+|||+.++++++......
T Consensus 268 ~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 268 DRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp GSCCHHHHHHHHHHHC--
T ss_pred cCcCHHHHHHHHHHhCcc
Confidence 999999999998876543
No 210
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=1.5e-36 Score=352.66 Aligned_cols=286 Identities=22% Similarity=0.220 Sum_probs=200.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC--------CCCccce
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--------HSCIVEM 874 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--------HpNIVkl 874 (1141)
..+|++.++||+|+||+||+|++. +..||+|+... .....+ .+.+|+.++++++ ||||+++
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~-----~~~~~~----~~~~E~~~l~~l~~~~~~~~~~~~iv~~ 106 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS-----AEHYTE----TALDEIRLLKSVRNSDPNDPNREMVVQL 106 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-----CHHHHH----HHHHHHHHHHHHHHSCTTCGGGGGBCCE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec-----CCcchH----HHHHHHHHHHHHhhcCCCCCCcceeeee
Confidence 367999999999999999999984 56677877531 122223 3478999999885 7889999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccC
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRD 953 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrD 953 (1141)
++++..... ...+.++||||+ +++|.+++.. .....+++..++.|+.||+.||.|||++ ||+|||
T Consensus 107 ~~~~~~~~~----------~~~~~~lv~e~~-~~~l~~~~~~---~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrD 172 (397)
T 1wak_A 107 LDDFKISGV----------NGTHICMVFEVL-GHHLLKWIIK---SNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTD 172 (397)
T ss_dssp EEEEEEEET----------TEEEEEEEECCC-CCBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCC
T ss_pred ecceeecCC----------CCceEEEEEecc-CccHHHHHHh---cccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCC
Confidence 999874211 123569999999 5777777765 2334699999999999999999999998 999999
Q ss_pred CCCCCeeeecccc------------------------------------------cCCCCCeEEEeeccccccccccccc
Q 001143 954 IKSENILIDLERK------------------------------------------KADGKPVVKLCDFDRAVPLRSFLHT 991 (1141)
Q Consensus 954 LKP~NILld~~~~------------------------------------------~~~~~~~vKL~DFGlA~~l~~~~~~ 991 (1141)
|||+|||++.++. .......+||+|||.+......
T Consensus 173 ikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--- 249 (397)
T 1wak_A 173 IKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--- 249 (397)
T ss_dssp CSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC---
T ss_pred CCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc---
Confidence 9999999986520 0001137999999999765431
Q ss_pred cccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH-HhC
Q 001143 992 CCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYMGLS------ELEIHDLI-QMG 1064 (1141)
Q Consensus 992 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~------~~el~~~I-~~~ 1064 (1141)
.....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+ ..+....+ ...
T Consensus 250 ----------~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 315 (397)
T 1wak_A 250 ----------FTEDIQTRQYRSLEVLIG----SGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELL 315 (397)
T ss_dssp ----------SCSCCSCGGGCCHHHHHT----SCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHH
T ss_pred ----------CccCCCCCcccCChhhcC----CCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhc
Confidence 123468999999999986 568899999999999999999999997543 22222222 111
Q ss_pred CCCCchhHHhhhccCcccccccc-----CCCCCC----------chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHH
Q 001143 1065 KRPRLTDELEALGSCHEHEVAQS-----GSGFEK----------PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMF 1129 (1141)
Q Consensus 1065 ~~p~l~~~l~~~~~~~~~~~~~~-----~~~~~~----------~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L 1129 (1141)
..++.. ...........+... ...... .......+..+.+||.+||+.||++|||+.|+++|+
T Consensus 316 ~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp 393 (397)
T 1wak_A 316 GKVPRK--LIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHP 393 (397)
T ss_dssp CSCCHH--HHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSG
T ss_pred CCCChH--HhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCc
Confidence 111111 000000000000000 000000 011235677899999999999999999999999999
Q ss_pred Hhh
Q 001143 1130 VAR 1132 (1141)
Q Consensus 1130 ~~~ 1132 (1141)
|+.
T Consensus 394 ~~~ 396 (397)
T 1wak_A 394 WLN 396 (397)
T ss_dssp GGG
T ss_pred ccc
Confidence 986
No 211
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.6e-37 Score=355.33 Aligned_cols=287 Identities=19% Similarity=0.209 Sum_probs=211.9
Q ss_pred CCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHH---------HHHhHHhHHHHHHHHhhCCCCCccc
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADE---------IRNFEYSCLGEVRMLGALRHSCIVE 873 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~---------~~~~~~~~~~Ei~iL~~L~HpNIVk 873 (1141)
....+|++.+.||+|+||.||+|.+.+..+|+|+............ .......+.+|+.++++++||||++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~ 107 (348)
T 2pml_X 28 KYINDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLT 107 (348)
T ss_dssp EEETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCC
T ss_pred cccCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcce
Confidence 3467899999999999999999999888999998764422111000 0000033489999999999999999
Q ss_pred eeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHh---hhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCc
Q 001143 874 MYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKL---SETGEKHVSVKLALFIAQDVAAALVELHS-KHI 949 (1141)
Q Consensus 874 llg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~---~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gI 949 (1141)
+++++.+.+ ..++||||+++++|.+++... .......+++..++.++.||+.||.|||+ +||
T Consensus 108 ~~~~~~~~~--------------~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i 173 (348)
T 2pml_X 108 CEGIITNYD--------------EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNI 173 (348)
T ss_dssp CSEEEESSS--------------EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCE
T ss_pred EEEEEeeCC--------------eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCE
Confidence 999998654 459999999999999883210 01224579999999999999999999999 999
Q ss_pred cccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCc-
Q 001143 950 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGL- 1028 (1141)
Q Consensus 950 vHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~- 1028 (1141)
+||||||+||+++.+ +.+||+|||.+....... .....||+.|+|||++.+. ..++.
T Consensus 174 ~H~dl~p~Nil~~~~-------~~~kl~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~---~~~~~~ 231 (348)
T 2pml_X 174 CHRDVKPSNILMDKN-------GRVKLSDFGESEYMVDKK------------IKGSRGTYEFMPPEFFSNE---SSYNGA 231 (348)
T ss_dssp ECCCCCGGGEEECTT-------SCEEECCCTTCEECBTTE------------ECSSCSCGGGCCGGGGSSC---CCEEHH
T ss_pred eecCCChHhEEEcCC-------CcEEEecccccccccccc------------ccCCCCCcCccCchhhcCC---CCCCcc
Confidence 999999999999887 789999999997654321 1234689999999998762 24445
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHH
Q 001143 1029 EVDIWSYGCLLLELLTLQVPYMGLSE-LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDV 1107 (1141)
Q Consensus 1029 ksDVWSLGviL~ELLTGk~Pf~~~~~-~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dL 1107 (1141)
++|||||||++|+|++|..||..... .+....+..+.... +..... .................+..+.+|
T Consensus 232 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~l 302 (348)
T 2pml_X 232 KVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEY-PLDRNH--------FLYPLTNKKSTCSNNFLSNEDIDF 302 (348)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCC-CCSSSS--------STTTTCC--------CCCHHHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCC-ccchhh--------hhccccccccccchhhcCHHHHHH
Confidence 99999999999999999999987655 55666665443221 100000 000000000001112566789999
Q ss_pred HHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1108 FRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1108 I~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
+.+||+.||.+|||+.|+++|+|+...
T Consensus 303 i~~~L~~dP~~Rps~~e~l~hp~f~~~ 329 (348)
T 2pml_X 303 LKLFLRKNPAERITSEDALKHEWLADT 329 (348)
T ss_dssp HHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred HHHHccCChhhCCCHHHHhcCccccCC
Confidence 999999999999999999999999754
No 212
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.5e-36 Score=344.23 Aligned_cols=270 Identities=22% Similarity=0.323 Sum_probs=198.0
Q ss_pred ceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 808 LSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
|++.++||+|+||+||++.+ .+..+|+|+.... ......+. +.+|+.++++++||||+++++++.+.
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD---AGPQHRSG----WKQEIDILRTLYHEHIIKYKGCCEDA 105 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT---CCHHHHHH----HHHHHHHHHHCCCTTBCCEEEEEEET
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc---cChHHHHH----HHHHHHHHHhCCCcchhhEEEEEecC
Confidence 49999999999999999876 4567888876432 22233333 48999999999999999999999864
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
+. ...++||||+++++|.+++.. ..+++..++.|+.||+.||.|||++||+||||||+||++
T Consensus 106 ~~------------~~~~lv~e~~~~~~L~~~l~~------~~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~ 167 (318)
T 3lxp_A 106 GA------------ASLQLVMEYVPLGSLRDYLPR------HSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL 167 (318)
T ss_dssp TT------------TEEEEEECCCTTCBHHHHGGG------SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE
T ss_pred CC------------ceEEEEEecccCCcHHHHHhh------CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE
Confidence 31 256999999999999999865 249999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||++.......... .......+|+.|+|||++.+ ..++.++||||||+++|+
T Consensus 168 ~~~-------~~~kl~Dfg~a~~~~~~~~~~-------~~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il~~ 229 (318)
T 3lxp_A 168 DND-------RLVKIGDFGLAKAVPEGHEYY-------RVREDGDSPVFWYAPECLKE----YKFYYASDVWSFGVTLYE 229 (318)
T ss_dssp CTT-------CCEEECCGGGCEECCTTCSEE-------EC---CCCCGGGCCHHHHHH----CEEEHHHHHHHHHHHHHH
T ss_pred cCC-------CCEEECCcccccccccccccc-------ccccCCCCCceeeChHHhcC----CCCCcHHHHHHHHHHHHH
Confidence 887 789999999998764422110 01123458889999999986 457799999999999999
Q ss_pred HHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1042 LLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
|++|..||..... ....... .... ....... ........... ....++..+.+|+.+||+.||.+|||
T Consensus 230 ll~g~~p~~~~~~-~~~~~~~-~~~~--~~~~~~~-----~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps 297 (318)
T 3lxp_A 230 LLTHCDSSQSPPT-KFLELIG-IAQG--QMTVLRL-----TELLERGERLP---RPDKCPAEVYHLMKNCWETEASFRPT 297 (318)
T ss_dssp HHTTTCGGGSHHH-HHHHHHC-SCCH--HHHHHHH-----HHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhCCCcccccch-hhhhhhc-cccc--chhHHHH-----HHHHhcccCCC---CCccccHHHHHHHHHHcCCCcccCcC
Confidence 9999999975221 1111110 0000 0000000 00000000000 11256678999999999999999999
Q ss_pred HHHHHHHHHhh
Q 001143 1122 AGDLYEMFVAR 1132 (1141)
Q Consensus 1122 a~ElL~~L~~~ 1132 (1141)
+.|+++.+...
T Consensus 298 ~~ell~~L~~l 308 (318)
T 3lxp_A 298 FENLIPILKTV 308 (318)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999887654
No 213
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=2.4e-37 Score=349.27 Aligned_cols=269 Identities=22% Similarity=0.307 Sum_probs=206.1
Q ss_pred CCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.....+|++.+.||+|+||.||+|.+.+ .+++|+..... ......+.+ .+|+.++++++||||+++++++.+.
T Consensus 29 ~i~~~~~~~~~~lg~G~~g~V~~~~~~~-~~avk~~~~~~--~~~~~~~~~----~~e~~~l~~l~h~~iv~~~~~~~~~ 101 (319)
T 2y4i_B 29 DIPFEQLEIGELIGKGRFGQVYHGRWHG-EVAIRLIDIER--DNEDQLKAF----KREVMAYRQTRHENVVLFMGACMSP 101 (319)
T ss_dssp SSCCSCEECCCBCCCSSSSEEEEEEESS-SEEEEECCCCS--CCCCCCCCC----CTTGGGGTTCCCTTBCCCCEEEECS
T ss_pred cCCHHHeEEeeEeccCCceEEEEEEEcC-eEEEEEeecCC--CCHHHHHHH----HHHHHHHhcCCCCCEeEEEEEEecC
Confidence 3457889999999999999999999876 47888754432 222222333 6899999999999999999999865
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. .++||||+++++|.+++.. ....+++..+..++.||+.||.|||++||+||||||+||++
T Consensus 102 ~~--------------~~iv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~ 163 (319)
T 2y4i_B 102 PH--------------LAIITSLCKGRTLYSVVRD----AKIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY 163 (319)
T ss_dssp SC--------------EEEECBCCCSEEHHHHTTS----SCCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEE
T ss_pred Cc--------------eEEEeecccCCcHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEE
Confidence 53 4999999999999999864 23468999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-----CCCCCCchhhHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-----KPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-----~~~~~s~ksDVWSLG 1036 (1141)
+ + +.+||+|||++......... ..........||+.|+|||++.+.. ....++.++||||||
T Consensus 164 ~-~-------~~~~l~Dfg~~~~~~~~~~~-----~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG 230 (319)
T 2y4i_B 164 D-N-------GKVVITDFGLFSISGVLQAG-----RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALG 230 (319)
T ss_dssp C----------CCEECCCSCCC---------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHH
T ss_pred e-C-------CCEEEeecCCcccccccccc-----ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHH
Confidence 7 3 67999999998754322111 0111223445899999999987522 123578999999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1037 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|++|+|++|+.||......+....+..+..+.... ...+..+.+++.+||..||
T Consensus 231 ~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~l~~li~~~l~~~p 284 (319)
T 2y4i_B 231 TIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQ--------------------------IGMGKEISDILLFCWAFEQ 284 (319)
T ss_dssp HHHHHHHHSSCSSSSCCHHHHHHHHHTTCCCCCCC--------------------------SSCCTTHHHHHHHHHCSST
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHhccCCCCCCCc--------------------------CCCCHHHHHHHHHHhcCCh
Confidence 99999999999999887777776665554433211 0234458999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001143 1117 TERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~ 1134 (1141)
.+|||+.++++.+.....
T Consensus 285 ~~Rpt~~~l~~~l~~l~~ 302 (319)
T 2y4i_B 285 EERPTFTKLMDMLEKLPK 302 (319)
T ss_dssp TTSCCHHHHHHHHTTC--
T ss_pred hhCcCHHHHHHHHHHHHH
Confidence 999999999999876543
No 214
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.5e-36 Score=345.45 Aligned_cols=295 Identities=19% Similarity=0.217 Sum_probs=198.0
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
+...+++|++.+.||+|+||.||+|++.+..||+|++.... ...+ ....|+..+..++||||+++++.+..
T Consensus 8 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~-------~~~~--~~e~~~~~~~~~~h~~i~~~~~~~~~ 78 (336)
T 3g2f_A 8 PSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFAN-------RQNF--INEKNIYRVPLMEHDNIARFIVGDER 78 (336)
T ss_dssp -CCCTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGG-------HHHH--HHHHHHHTSTTCCCTTBCCEEEEEEE
T ss_pred CCcChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccc-------hhhH--HHHHHHHHHHhccCcchhhheecccc
Confidence 34568899999999999999999999999999999875321 1122 01234444456799999999987654
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---------Cccc
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---------HIMH 951 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~---------gIvH 951 (1141)
... ......++||||+++|+|.+++.. ...++..+..|+.||+.||.|||++ ||+|
T Consensus 79 ~~~---------~~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH 143 (336)
T 3g2f_A 79 VTA---------DGRMEYLLVMEYYPNGSLXKYLSL------HTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISH 143 (336)
T ss_dssp ECT---------TSCEEEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEEC
T ss_pred ccc---------CCCceEEEEEecCCCCcHHHHHhh------cccchhHHHHHHHHHHHHHHHHHhhhccccccccceee
Confidence 221 112356899999999999999976 2468999999999999999999999 9999
Q ss_pred cCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC---CCCCc
Q 001143 952 RDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP---NLYGL 1028 (1141)
Q Consensus 952 rDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~---~~~s~ 1028 (1141)
|||||+|||++.+ +.+||+|||+++.+......... ..........||+.|+|||++.+.... ..++.
T Consensus 144 ~Dikp~Nill~~~-------~~~kL~DFG~a~~~~~~~~~~~~--~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~ 214 (336)
T 3g2f_A 144 RDLNSRNVLVKND-------GTCVISDFGLSMRLTGNRLVRPG--EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALK 214 (336)
T ss_dssp SSCSGGGEEECTT-------SCEEECCCTTCEECSSSSCC-----------CCTTSCGGGCCHHHHTTCCCGGGHHHHHH
T ss_pred cccccceEEEcCC-------CcEEEeeccceeecccccccCcc--ccccccccCCCccceeCchhhcCCccccccccccc
Confidence 9999999999887 78999999999865432211000 001112244699999999998752110 23557
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCCCCH-HH--HHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHH
Q 001143 1029 EVDIWSYGCLLLELLTLQVPYMGLSE-LE--IHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLV 1105 (1141)
Q Consensus 1029 ksDVWSLGviL~ELLTGk~Pf~~~~~-~e--l~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 1105 (1141)
++|||||||++|||++|..||..... .+ ..........+............ .........+. .....++.+.
T Consensus 215 ~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~l~ 289 (336)
T 3g2f_A 215 QVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSRE--KQRPKFPEAWK---ENSLAVRSLK 289 (336)
T ss_dssp HHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTS--CCCCCCCTTCC---CCSHHHHHHH
T ss_pred ccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhccc--ccCCCCCcccc---cccchHHHHH
Confidence 89999999999999999776643211 00 00000111111111100000000 00000000000 0124677899
Q ss_pred HHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1106 DVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1106 dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
+||.+||+.||.+|||+.|+++.+....
T Consensus 290 ~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 290 ETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp HHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 9999999999999999999999887653
No 215
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=2.1e-36 Score=337.41 Aligned_cols=278 Identities=21% Similarity=0.293 Sum_probs=196.3
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|++. +..+|+|+.... ....+. +.+|+.++++++||||+++++++.+...
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~----~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 76 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-----EEKLST----ILSEVMLLASLNHQYVVRYYAAWLERRN 76 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-----HHHHHH----HHHHHHHHTTCCCTTBCCEEEEEEECCC
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-----HHHHHH----HHHHHHHHHhcCchHHHHHHHHHHhhcc
Confidence 36899999999999999999984 667888875421 222333 4799999999999999999999876432
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
+... -.........++||||+++++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 77 ~~~~-~~~~~~~~~~~lv~e~~~~~~L~~~l~~----~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~ 151 (303)
T 1zy4_A 77 FVKP-MTAVKKKSTLFIQMEYCENGTLYDLIHS----ENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDE 151 (303)
T ss_dssp CCC-------CEEEEEEEEECCCSCBHHHHHHH----SCGGGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECT
T ss_pred hhhh-hcccccCCceEEEEecCCCCCHHHhhhc----cccccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcC
Confidence 1000 0011123467999999999999999985 2346889999999999999999999999999999999999988
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccc----cCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIA----HRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~----~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+ +.+||+|||.+............. ...........||+.|+|||++.+ ...++.++|||||||++
T Consensus 152 ~-------~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---~~~~~~~~Di~slG~il 221 (303)
T 1zy4_A 152 S-------RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG---TGHYNEKIDMYSLGIIF 221 (303)
T ss_dssp T-------SCEEECCCCCCSCTTC-------------------------CTTSCHHHHTS---CSCCCTHHHHHHHHHHH
T ss_pred C-------CCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccC---CCCCcchhhHHHHHHHH
Confidence 7 789999999997654321100000 000111234568999999999875 23578999999999999
Q ss_pred HHHHhCCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1040 LELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
|+|++ ||... ...+....+..... .++ +......+..+.+++.+||+.||.+
T Consensus 222 ~~l~~---p~~~~~~~~~~~~~~~~~~~-~~~-----------------------~~~~~~~~~~~~~li~~~l~~dp~~ 274 (303)
T 1zy4_A 222 FEMIY---PFSTGMERVNILKKLRSVSI-EFP-----------------------PDFDDNKMKVEKKIIRLLIDHDPNK 274 (303)
T ss_dssp HHHHS---CCSSHHHHHHHHHHHHSTTC-CCC-----------------------TTCCTTTSHHHHHHHHHHTCSSGGG
T ss_pred HHHHh---ccCCchhHHHHHHhcccccc-ccC-----------------------ccccccchHHHHHHHHHHHhcCccc
Confidence 99998 56432 22223333332211 111 0011145567899999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
|||+.++++|+|+...
T Consensus 275 Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 275 RPGARTLLNSGWLPVK 290 (303)
T ss_dssp SCCHHHHHHSSCSCCC
T ss_pred CcCHHHHhCCCCcCCC
Confidence 9999999999999643
No 216
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.7e-36 Score=342.51 Aligned_cols=263 Identities=24% Similarity=0.263 Sum_probs=195.3
Q ss_pred CCCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEe
Q 001143 802 PGSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 802 ~~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~ 879 (1141)
...+.+|++.+.||+|+||.||+|.+. +..+|+|+..... .. .......+.+|+.++++++||||+++++++.
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~---~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~ 104 (309)
T 2h34_A 30 GTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETL--SS---DPVFRTRMQREARTAGRLQEPHVVPIHDFGE 104 (309)
T ss_dssp ----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGG--GG---SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEE
T ss_pred CcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCccc--cc---CHHHHHHHHHHHHHHhhcCCCCeeEEEEEEe
Confidence 345789999999999999999999985 5567777643221 11 1122334589999999999999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
..+ ..++||||+++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus 105 ~~~--------------~~~lv~e~~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NI 165 (309)
T 2h34_A 105 IDG--------------QLYVDMRLINGVDLAAMLRR-----QGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENI 165 (309)
T ss_dssp ETT--------------EEEEEEECCCCEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGE
T ss_pred eCC--------------eEEEEEEecCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHE
Confidence 655 34999999999999999986 23699999999999999999999999999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
|++.+ +.+||+|||++......... ......||+.|+|||++.+ ..++.++||||||+++
T Consensus 166 l~~~~-------~~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~il 225 (309)
T 2h34_A 166 LVSAD-------DFAYLVDFGIASATTDEKLT---------QLGNTVGTLYYMAPERFSE----SHATYRADIYALTCVL 225 (309)
T ss_dssp EECTT-------SCEEECSCCC-------------------------CCGGGCCGGGTCC--------CCCHHHHHHHHH
T ss_pred EEcCC-------CCEEEecCccCccccccccc---------cccccCCCcCccCHHHHcC----CCCCchHhHHHHHHHH
Confidence 99887 78999999998765432111 1123468999999999876 5678999999999999
Q ss_pred HHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1040 LELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|+|++|+.||.+.....+...+.... +.... .....+..+.+++.+||+.||.+|
T Consensus 226 ~~l~~g~~pf~~~~~~~~~~~~~~~~-~~~~~------------------------~~~~~~~~l~~li~~~l~~dP~~R 280 (309)
T 2h34_A 226 YECLTGSPPYQGDQLSVMGAHINQAI-PRPST------------------------VRPGIPVAFDAVIARGMAKNPEDR 280 (309)
T ss_dssp HHHHHSSCSSCSCHHHHHHHHHHSCC-CCGGG------------------------TSTTCCTHHHHHHHHHTCSSGGGS
T ss_pred HHHHHCCCCCCCchHHHHHHHhccCC-CCccc------------------------cCCCCCHHHHHHHHHhccCCHHHH
Confidence 99999999998765543333333221 11100 011455679999999999999999
Q ss_pred C-CHHHHHHHHHhhc
Q 001143 1120 P-TAGDLYEMFVART 1133 (1141)
Q Consensus 1120 P-Sa~ElL~~L~~~~ 1133 (1141)
| +++++++.+....
T Consensus 281 p~s~~~l~~~l~~~l 295 (309)
T 2h34_A 281 YVTCGDLSAAAHAAL 295 (309)
T ss_dssp CSSHHHHHHHHHHTC
T ss_pred HHhHHHHHHHHHHHH
Confidence 9 9999999887653
No 217
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.4e-36 Score=370.03 Aligned_cols=257 Identities=26% Similarity=0.363 Sum_probs=208.3
Q ss_pred CCCCceEeeeecccCceEEEEEEECC-ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKFGS-ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~~~-~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
...+|++.++||+|+||.||+|.+.+ ..||+|+.+.. ... .+.+ .+|+.+|++++||||+++++++.+ .
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~--~~~---~~~~----~~E~~~l~~l~hpniv~~~~~~~~-~ 334 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG--TMS---PEAF----LQEAQVMKKLRHEKLVQLYAVVSE-E 334 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTT--SSC---HHHH----HHHHHHHHHCCCTTBCCEEEEECS-S
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCC--CCC---HHHH----HHHHHHHHhCCCCCEeeEEEEEee-c
Confidence 34569999999999999999999965 46888875432 111 2233 799999999999999999999864 2
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
. .+|||||+++|+|.++++... ...+++..++.|+.||+.||+|||++||+||||||+|||++
T Consensus 335 ~--------------~~lv~e~~~~gsL~~~l~~~~---~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~ 397 (535)
T 2h8h_A 335 P--------------IYIVTEYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG 397 (535)
T ss_dssp S--------------CEEEECCCTTEEHHHHHSHHH---HTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC
T ss_pred c--------------ceEeeehhcCCcHHHHHhhcC---CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc
Confidence 2 399999999999999997521 23589999999999999999999999999999999999998
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ +.+||+|||+++........ ......++..|+|||++.+ ..++.++|||||||++|||
T Consensus 398 ~~-------~~~kl~DFG~a~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~----~~~~~~sDvwSlGv~l~el 457 (535)
T 2h8h_A 398 EN-------LVCKVADFGLARLIEDNEYT---------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTEL 457 (535)
T ss_dssp GG-------GCEEECCTTSTTTCCCHHHH---------TTCSTTSCGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHH
T ss_pred CC-------CcEEEcccccceecCCCcee---------cccCCcCcccccCHHHhcc----CCCCchhhHHHHHHHHHHH
Confidence 87 78999999999765432111 1112346789999999986 5688999999999999999
Q ss_pred Hh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCC
Q 001143 1043 LT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPT 1121 (1141)
Q Consensus 1043 LT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPS 1121 (1141)
++ |+.||.+....++...+..+.....+. .++..+.+||.+||+.||++|||
T Consensus 458 ~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~cl~~dP~~RPt 510 (535)
T 2h8h_A 458 TTKGRVPYPGMVNREVLDQVERGYRMPCPP---------------------------ECPESLHDLMCQCWRKEPEERPT 510 (535)
T ss_dssp TTTTCCSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HhCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCChhHCcC
Confidence 99 999999888888777776554332211 45667999999999999999999
Q ss_pred HHHHHHHHHhhcC
Q 001143 1122 AGDLYEMFVARTS 1134 (1141)
Q Consensus 1122 a~ElL~~L~~~~~ 1134 (1141)
+.+|++.+.....
T Consensus 511 ~~~l~~~L~~~~~ 523 (535)
T 2h8h_A 511 FEYLQAFLEDYFT 523 (535)
T ss_dssp HHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHhh
Confidence 9999998876543
No 218
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=3.9e-36 Score=343.40 Aligned_cols=283 Identities=18% Similarity=0.193 Sum_probs=202.8
Q ss_pred CCCceEeeeecccCceEEEEEEECC---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCC------cccee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC------IVEMY 875 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~---~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpN------IVkll 875 (1141)
..+|++.+.||+|+||+||+|.+.. ..||+|+... .....+. +.+|+.++++++|++ ++.++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~-----~~~~~~~----~~~E~~~l~~l~~~~~~~~~~~~~~~ 88 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN-----VGKYREA----ARLEINVLKKIKEKDKENKFLCVLMS 88 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS-----CHHHHHH----HHHHHHHHHHHHHHCTTSCSCBCCEE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc-----cccchhH----HHHHHHHHHHHhhcCCCCceeEEEee
Confidence 4679999999999999999999842 4688887542 1222233 378999999887655 88888
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 955 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLK 955 (1141)
+++.... +.++||||+ +++|.+++.. .....+++..++.|+.||+.||.|||++||+|||||
T Consensus 89 ~~~~~~~--------------~~~lv~e~~-~~~l~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlk 150 (355)
T 2eu9_A 89 DWFNFHG--------------HMCIAFELL-GKNTFEFLKE---NNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLK 150 (355)
T ss_dssp EEEEETT--------------EEEEEEECC-CCBHHHHHHH---TTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCC
T ss_pred eeeeeCC--------------eEEEEEecc-CCChHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 8887654 459999999 5778777765 233469999999999999999999999999999999
Q ss_pred CCCeeeecccc------------cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCC
Q 001143 956 SENILIDLERK------------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKP 1023 (1141)
Q Consensus 956 P~NILld~~~~------------~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 1023 (1141)
|+|||++.... .....+.+||+|||+++..... .....||+.|+|||++.+
T Consensus 151 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------~~~~~gt~~y~aPE~~~~---- 213 (355)
T 2eu9_A 151 PENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEH-------------HTTIVATRHYRPPEVILE---- 213 (355)
T ss_dssp GGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTSC-------------CCSSCSCGGGCCHHHHTT----
T ss_pred HHHEEEecccccccccccccccccccCCCcEEEeecCcccccccc-------------ccCCcCCCcccCCeeeec----
Confidence 99999943210 0011278999999999753321 123468999999999976
Q ss_pred CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCC----------
Q 001143 1024 NLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEK---------- 1093 (1141)
Q Consensus 1024 ~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~---------- 1093 (1141)
..++.++|||||||++|+|++|..||......+....+.....+........... ...+......+..
T Consensus 214 ~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 291 (355)
T 2eu9_A 214 LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGGLVWDENSSDGRYVKE 291 (355)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSC--GGGEETTEECCCTTSHHHHHHHH
T ss_pred CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccc--hhhhcccccccccccchhccccc
Confidence 5688999999999999999999999998777665554433222211111111000 0000000000000
Q ss_pred --------chhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1094 --------PEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1094 --------~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.......+..+.+||.+||+.||++|||+.|+++|+|+..
T Consensus 292 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 339 (355)
T 2eu9_A 292 NCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAG 339 (355)
T ss_dssp HCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGG
T ss_pred cCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcC
Confidence 0001134668999999999999999999999999999975
No 219
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=3.7e-36 Score=342.90 Aligned_cols=266 Identities=27% Similarity=0.363 Sum_probs=203.2
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhh--CCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~--L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|++.+..+|+|++... .... +.+|++++.. ++||||+++++++.....
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~-------~~~~----~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~ 110 (342)
T 1b6c_B 42 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERS----WFREAEIYQTVMLRHENILGFIAADNKDNG 110 (342)
T ss_dssp HHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG-------GHHH----HHHHHHHHHHSCCCCTTBCCEEEEEECCCS
T ss_pred ccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch-------hHHH----HHHHHHHHHHhhcCCCcEEEEEeeecccCC
Confidence 46999999999999999999999999999986421 1222 3678888877 689999999999876431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCccccCCC
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDIK 955 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLH--------s~gIvHrDLK 955 (1141)
.....++||||+++++|.+++.+ ..+++..++.++.||+.||.||| ++||+|||||
T Consensus 111 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk 174 (342)
T 1b6c_B 111 ----------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174 (342)
T ss_dssp ----------SCCCEEEEECCCTTCBHHHHHHH------CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCS
T ss_pred ----------ccceeEEEEeecCCCcHHHHHhc------cCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCC
Confidence 12256999999999999999976 35999999999999999999999 8999999999
Q ss_pred CCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC--CCCchhhHH
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDIW 1033 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksDVW 1033 (1141)
|+|||++.+ +.+||+|||++........... .......||+.|+|||++.+..... .++.++|||
T Consensus 175 p~NIll~~~-------~~~kL~Dfg~~~~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~ 241 (342)
T 1b6c_B 175 SKNILVKKN-------GTCCIADLGLAVRHDSATDTID------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY 241 (342)
T ss_dssp GGGEEECTT-------SCEEECCCTTCEEEETTTTEEE------ECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHH
T ss_pred HHHEEECCC-------CCEEEEECCCceeccccccccc------cccccCCcCcccCCHhhhcccccccccccCCcccHH
Confidence 999999887 7899999999976544221100 0122446999999999997632111 233789999
Q ss_pred HHHHHHHHHHhC----------CCCCCCC-----CHHHHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhh
Q 001143 1034 SYGCLLLELLTL----------QVPYMGL-----SELEIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1097 (1141)
Q Consensus 1034 SLGviL~ELLTG----------k~Pf~~~-----~~~el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1141)
||||++|+|++| ..||... ....+...+.. ...+.++..+ ..
T Consensus 242 slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 299 (342)
T 1b6c_B 242 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QS 299 (342)
T ss_dssp HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGG----------------------GT
T ss_pred HHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccc----------------------cc
Confidence 999999999999 7888653 22333333322 2222222111 11
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1098 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1098 ~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
...++.+.+|+.+||+.||.+|||+.++++++....
T Consensus 300 ~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~ 335 (342)
T 1b6c_B 300 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLS 335 (342)
T ss_dssp SHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 256778999999999999999999999999987654
No 220
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=5.5e-36 Score=370.32 Aligned_cols=254 Identities=22% Similarity=0.315 Sum_probs=198.7
Q ss_pred CCceEee-eecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 806 PSLSSCD-EAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 806 ~~y~i~~-~LG~GsfG~Vy~a~~~----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
.++.+.+ +||+|+||.||+|.+. +..||+|+. +... .....+.+ .+|+.+|++++|||||++++++..
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~--~~~~-~~~~~~~~----~~E~~il~~l~hpniv~l~~~~~~ 407 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVL--KQGT-EKADTEEM----MREAQIMHQLDNPYIVRLIGVCQA 407 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEEC--CCCC-SSTTHHHH----HHHHHHHTTCCCTTBCCEEEEEES
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEc--CCCC-ChHHHHHH----HHHHHHHHhCCCCCEeeEEEEecc
Confidence 4456666 8999999999999873 334666664 3221 11223334 899999999999999999999874
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
+ ..++||||+++|+|.+++.. ....+++..+..|+.||+.||+|||++||+||||||+|||
T Consensus 408 ~---------------~~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NIL 468 (613)
T 2ozo_A 408 E---------------ALMLVMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVL 468 (613)
T ss_dssp S---------------SEEEEEECCTTCBHHHHHTT----CTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred C---------------CeEEEEEeCCCCcHHHHHhh----ccCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEE
Confidence 2 24999999999999999864 2346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+ +.+||+|||+++.+....... .......+|+.|+|||++.+ ..++.++|||||||++|
T Consensus 469 l~~~-------~~vkL~DFGla~~~~~~~~~~-------~~~~~~~~~~~y~APE~~~~----~~~~~~sDvwSlGv~l~ 530 (613)
T 2ozo_A 469 LVNR-------HYAKISDFGLSKALGADDSYY-------TARSAGKWPLKWYAPECINF----RKFSSRSDVWSYGVTMW 530 (613)
T ss_dssp EEET-------TEEEECCCSTTTTCC---------------------CCTTSCHHHHHH----CCCCHHHHHHHHHHHHH
T ss_pred EcCC-------CcEEEeeccCcccccCCCcee-------eeccCCCCccceeCHhhhcC----CCCCcHHHHHHHHHHHH
Confidence 9987 889999999997654322110 01112346789999999976 57889999999999999
Q ss_pred HHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1041 ELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1041 ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
||++ |+.||.+....++...+..+..+..+. .+++++.+||.+||+.||++|
T Consensus 531 ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dP~~R 583 (613)
T 2ozo_A 531 EALSYGQKPYKKMKGPEVMAFIEQGKRMECPP---------------------------ECPPELYALMSDCWIYKWEDR 583 (613)
T ss_dssp HHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHTTCSSTTTS
T ss_pred HHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCC---------------------------cCCHHHHHHHHHHcCCChhHC
Confidence 9998 999999888888887776665433221 456779999999999999999
Q ss_pred CCHHHHHHHHH
Q 001143 1120 PTAGDLYEMFV 1130 (1141)
Q Consensus 1120 PSa~ElL~~L~ 1130 (1141)
|++.+|++.+.
T Consensus 584 Ps~~~l~~~L~ 594 (613)
T 2ozo_A 584 PDFLTVEQRMR 594 (613)
T ss_dssp CCHHHHHHHHH
T ss_pred cCHHHHHHHHH
Confidence 99999976653
No 221
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=5e-36 Score=349.09 Aligned_cols=281 Identities=20% Similarity=0.255 Sum_probs=203.9
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CC-----Cccceee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HS-----CIVEMYG 876 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-Hp-----NIVkllg 876 (1141)
..+|++.++||+|+||+||+|.+. +..||+|+... ...... .+..|+.+++.++ |+ +|+++++
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~----~~~~e~~~l~~l~~~~~~~~~~iv~~~~ 123 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN-----KKAFLN----QAQIEVRLLELMNKHDTEMKYYIVHLKR 123 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS-----SHHHHH----HHHHHHHHHHHHHHCSSGGGGGBCCEEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec-----cHHHHH----HHHHHHHHHHHHHhcccccceeEEEeee
Confidence 578999999999999999999985 55677777542 122222 3367888888885 55 4899999
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--HCCccccCC
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--SKHIMHRDI 954 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLH--s~gIvHrDL 954 (1141)
++.... +.++||||++ ++|.+++.. .....+++..++.++.||+.||.||| +.||+||||
T Consensus 124 ~~~~~~--------------~~~lv~e~~~-~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDl 185 (382)
T 2vx3_A 124 HFMFRN--------------HLCLVFEMLS-YNLYDLLRN---TNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDL 185 (382)
T ss_dssp EEEETT--------------EEEEEEECCC-CBHHHHHHH---TTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCC
T ss_pred eeccCC--------------ceEEEEecCC-CCHHHHHhh---cCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCC
Confidence 988654 4599999996 699999986 22346999999999999999999999 579999999
Q ss_pred CCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001143 955 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1034 (1141)
Q Consensus 955 KP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWS 1034 (1141)
||+|||++.+.. +.+||+|||+++..... .....||+.|+|||++.+ ..++.++||||
T Consensus 186 kp~NIll~~~~~-----~~~kL~DFG~a~~~~~~-------------~~~~~~t~~y~aPE~~~~----~~~~~~~DiwS 243 (382)
T 2vx3_A 186 KPENILLCNPKR-----SAIKIVDFGSSCQLGQR-------------IYQYIQSRFYRSPEVLLG----MPYDLAIDMWS 243 (382)
T ss_dssp SGGGEEESSTTS-----CCEEECCCTTCEETTCC-------------CCSSCSCGGGCCHHHHTT----CCCCTHHHHHH
T ss_pred CcccEEEecCCC-----CcEEEEeccCceecccc-------------cccccCCccccChHHHcC----CCCCcHHHHHH
Confidence 999999964321 78999999999765321 123468999999999986 56889999999
Q ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhcc-------Cccccc-----cccCCCCCCc--------
Q 001143 1035 YGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGS-------CHEHEV-----AQSGSGFEKP-------- 1094 (1141)
Q Consensus 1035 LGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~-------~~~~~~-----~~~~~~~~~~-------- 1094 (1141)
|||++|||++|+.||.+.+..+....+................. .....+ ......+..+
T Consensus 244 lG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 323 (382)
T 2vx3_A 244 LGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNI 323 (382)
T ss_dssp HHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHH
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhccccccccccccccccccCCcchhhHHHH
Confidence 99999999999999998887776666633222221111111000 000000 0000000000
Q ss_pred ----------------hhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1095 ----------------EAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1095 ----------------~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
.......+.+.+||.+||++||++|||++|+++|+|+...
T Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~ 379 (382)
T 2vx3_A 324 LGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKT 379 (382)
T ss_dssp HTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC-
T ss_pred hhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccC
Confidence 0011234579999999999999999999999999999754
No 222
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=6.8e-36 Score=332.97 Aligned_cols=263 Identities=17% Similarity=0.160 Sum_probs=194.7
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
-++|++.+.||+|+||.||+|++ .+..+|+|+...... ... +.+|+.+++.++|++++..+..+....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~------~~~----~~~e~~~l~~l~~~~~i~~~~~~~~~~ 77 (296)
T 4hgt_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK------HPQ----LHIESKIYKMMQGGVGIPTIRWCGAEG 77 (296)
T ss_dssp ---CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---------CCC----HHHHHHHHHHHTTSTTCCCEEEEEEET
T ss_pred CCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc------chH----HHHHHHHHHHhcCCCCCCeeeeecCCC
Confidence 36799999999999999999997 466788887543321 112 378999999999888887777664422
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee-
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI- 961 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl- 961 (1141)
...++||||+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 78 -------------~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~ 139 (296)
T 4hgt_A 78 -------------DYNVMVMELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG 139 (296)
T ss_dssp -------------TEEEEEEECC-CCBHHHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC
T ss_pred -------------CceEEEEEcc-CCCHHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeee
Confidence 1459999999 89999999752 3469999999999999999999999999999999999999
Q ss_pred --ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 962 --DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 962 --d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
+.+ +.+||+|||+++.......... ..........||+.|+|||++.+ ..++.++|||||||++
T Consensus 140 ~~~~~-------~~~kL~Dfg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 205 (296)
T 4hgt_A 140 LGKKG-------NLVYIIDFGLAKKYRDARTHQH---IPYRENKNLTGTARYASINTHLG----IEQSRRDDLESLGYVL 205 (296)
T ss_dssp CGGGT-------TCEEECCCTTCEECBCTTTCCB---CCCCCSCCCCSCGGGCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred ccCCC-------CeEEEecCccceeccCcccCcc---CCCCcccccCCCccccchHHhcC----CCCCchhHHHHHHHHH
Confidence 444 7899999999987654322110 01112234579999999999986 5688999999999999
Q ss_pred HHHHhCCCCCCCCCHH---HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1040 LELLTLQVPYMGLSEL---EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~~---el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|+|++|+.||.+.... +....+.....+... +......++.+.+++.+||+.||
T Consensus 206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~~p 262 (296)
T 4hgt_A 206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----------------------EVLCKGYPSEFATYLNFCRSLRF 262 (296)
T ss_dssp HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----------------------HHHTTTSCHHHHHHHHHHHTSCT
T ss_pred HHHhcCCCCCcccchhhhhhhhhhhhcccccchh-----------------------hhhhccCCHHHHHHHHHHHhcCC
Confidence 9999999999764321 112221111000000 00011446789999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001143 1117 TERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~ 1132 (1141)
++|||+.++++.+...
T Consensus 263 ~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 263 DDKPDYSYLRQLFRNL 278 (296)
T ss_dssp TCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHH
Confidence 9999999999887553
No 223
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=1e-36 Score=346.27 Aligned_cols=268 Identities=23% Similarity=0.321 Sum_probs=183.6
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHH-HHhhCCCCCccceeeeEe
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVR-MLGALRHSCIVEMYGHKI 879 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpNIVkllg~~~ 879 (1141)
...++|++.+.||+|+||.||+|.+. +..||+|+.... . .......+ ..|+. +++.++||||+++++++.
T Consensus 19 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~-~~~~~~~~----~~e~~~~~~~~~h~niv~~~~~~~ 91 (327)
T 3aln_A 19 FTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRST--V-DEKEQKQL----LMDLDVVMRSSDCPYIVQFYGALF 91 (327)
T ss_dssp CCSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECC--C-CHHHHHHH----HHHHHHHHSSCCCTTBCCEEEEEE
T ss_pred cCHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecc--c-CchHHHHH----HHHHHHHHHcCCCCcEeeeeeEEE
Confidence 34678999999999999999999985 667888876432 1 22222222 45665 667779999999999998
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCC
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSEN 958 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~N 958 (1141)
..+ ..++||||++ ++|.+++..........+++..+..++.|++.||.|||++ ||+||||||+|
T Consensus 92 ~~~--------------~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~N 156 (327)
T 3aln_A 92 REG--------------DCWICMELMS-TSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSN 156 (327)
T ss_dssp CSS--------------EEEEEECCCS-EEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGG
T ss_pred eCC--------------ceEEEEeecC-CChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHH
Confidence 654 3499999998 5898888754444456799999999999999999999999 99999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
||++.+ +.+||+|||++........ .....||+.|+|||++........++.++|||||||+
T Consensus 157 Ill~~~-------~~~kl~Dfg~~~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i 218 (327)
T 3aln_A 157 ILLDRS-------GNIKLCDFGISGQLVDSIA-----------KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218 (327)
T ss_dssp EEEETT-------TEEEECCCSSSCC-----------------------------------------CCSHHHHHHHHHH
T ss_pred EEEcCC-------CCEEEccCCCceecccccc-----------cccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence 999887 8899999999976543211 1123589999999998532223567899999999999
Q ss_pred HHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLTLQVPYMGLSEL-EIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~-el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|+|++|+.||...... +....+..+..+.+.. ......+..+.+|+.+||+.||.
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~l~~li~~~l~~dp~ 275 (327)
T 3aln_A 219 LYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSN-----------------------SEEREFSPSFINFVNLCLTKDES 275 (327)
T ss_dssp HHHHHHSCCCSSCC-------CCCCCSCCCCCCC-----------------------CSSCCCCHHHHHHHHHHTCSSGG
T ss_pred HHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCC-----------------------cccccCCHHHHHHHHHHhhCChh
Confidence 99999999999764321 1111111111111100 00014567799999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001143 1118 ERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~ 1133 (1141)
+|||+.++++|+|+..
T Consensus 276 ~Rps~~ell~hp~~~~ 291 (327)
T 3aln_A 276 KRPKYKELLKHPFILM 291 (327)
T ss_dssp GSCCHHHHTTSHHHHH
T ss_pred hCcCHHHHHhChHHHH
Confidence 9999999999999964
No 224
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.4e-36 Score=372.44 Aligned_cols=249 Identities=21% Similarity=0.334 Sum_probs=199.0
Q ss_pred eeecccCceEEEEEEEC----CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFG----SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~----~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~ 887 (1141)
++||+|+||.||+|.+. +..||||+.+.. .......+ .+.+|+.++++++|||||++++++....
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~--~~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 443 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE--ANDPALKD----ELLAEANVMQQLDNPYIVRMIGICEAES----- 443 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGG--GGCGGGHH----HHHHHHHHHHHCCCTTBCCEEEEEESSS-----
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccc--cCCHHHHH----HHHHHHHHHHhCCCCCEeeEEEEEecCC-----
Confidence 48999999999999762 356788875432 11222223 3489999999999999999999986432
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeeccccc
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKK 967 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~ 967 (1141)
.++||||+++|+|.++++. ...+++..++.|+.||+.||+|||++||+||||||+|||++.+
T Consensus 444 ----------~~lv~E~~~~g~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~--- 505 (635)
T 4fl3_A 444 ----------WMLVMEMAELGPLNKYLQQ-----NRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQ--- 505 (635)
T ss_dssp ----------EEEEEECCTTEEHHHHHHH-----CTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEET---
T ss_pred ----------EEEEEEccCCCCHHHHHhh-----CCCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCC---
Confidence 3899999999999999976 3469999999999999999999999999999999999999987
Q ss_pred CCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh-CC
Q 001143 968 ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT-LQ 1046 (1141)
Q Consensus 968 ~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT-Gk 1046 (1141)
+.+||+|||+++.+....... .......+|+.|+|||++.+ ..++.++|||||||++|||++ |+
T Consensus 506 ----~~~kL~DFGla~~~~~~~~~~-------~~~~~~~~t~~y~APE~~~~----~~~~~~sDvwSlGv~l~ellt~G~ 570 (635)
T 4fl3_A 506 ----HYAKISDFGLSKALRADENYY-------KAQTHGKWPVKWYAPECINY----YKFSSKSDVWSFGVLMWEAFSYGQ 570 (635)
T ss_dssp ----TEEEECCTTHHHHTTC--------------------CGGGSCHHHHHH----CCCCHHHHHHHHHHHHHHHHTTTC
T ss_pred ----CCEEEEEcCCccccccCcccc-------ccccCCCCceeeeChhhhcC----CCCCcHHHHHHHHHHHHHHHhCCC
Confidence 789999999998654322110 01123346889999999976 568899999999999999998 99
Q ss_pred CCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH
Q 001143 1047 VPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY 1126 (1141)
Q Consensus 1047 ~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL 1126 (1141)
.||.+....++...+..+..+..+. .+++++.+||.+||+.||++||++.+|+
T Consensus 571 ~Pf~~~~~~~~~~~i~~~~~~~~p~---------------------------~~~~~l~~li~~cl~~dP~~RPs~~~l~ 623 (635)
T 4fl3_A 571 KPYRGMKGSEVTAMLEKGERMGCPA---------------------------GCPREMYDLMNLCWTYDVENRPGFAAVE 623 (635)
T ss_dssp CSSTTCCHHHHHHHHHTTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CCCCCCCHHHHHHHHHcCCCCCCCC---------------------------CCCHHHHHHHHHHcCCCHhHCcCHHHHH
Confidence 9999988888888777665443321 4566799999999999999999999999
Q ss_pred HHHHh
Q 001143 1127 EMFVA 1131 (1141)
Q Consensus 1127 ~~L~~ 1131 (1141)
+.+..
T Consensus 624 ~~L~~ 628 (635)
T 4fl3_A 624 LRLRN 628 (635)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88754
No 225
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=5.6e-36 Score=334.05 Aligned_cols=263 Identities=17% Similarity=0.160 Sum_probs=197.6
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
-++|++.+.||+|+||.||+|++ .+..+|+|+...... . +. +.+|+.+++.++|++++..+.++....
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~----~~----~~~e~~~l~~l~~~~~i~~~~~~~~~~ 77 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--H----PQ----LHIESKIYKMMQGGVGIPTIRWCGAEG 77 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--C----CH----HHHHHHHHHHHTTSTTCCCEEEEEEET
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--h----hH----HHHHHHHHHHhhcCCCCCccccccCCC
Confidence 46799999999999999999997 567788887543321 1 12 378999999999888777776664322
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
...++||||+ +++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++
T Consensus 78 -------------~~~~lv~e~~-~~~L~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~ 139 (296)
T 3uzp_A 78 -------------DYNVMVMELL-GPSLEDLFNFC----SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG 139 (296)
T ss_dssp -------------TEEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC
T ss_pred -------------CceEEEEEec-CCCHHHHHHhh----ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEe
Confidence 1459999999 89999999752 34699999999999999999999999999999999999995
Q ss_pred ---cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHH
Q 001143 963 ---LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 963 ---~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL 1039 (1141)
.+ +.+||+|||++........... ..........||+.|+|||++.+ ..++.++|||||||++
T Consensus 140 ~~~~~-------~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~slG~il 205 (296)
T 3uzp_A 140 LGKKG-------NLVYIIDFGLAKKYRDARTHQH---IPYRENKNLTGTARYASINTHLG----IEQSRRDDLESLGYVL 205 (296)
T ss_dssp CGGGT-------TCEEECCCTTCEECBCTTTCCB---CCCCCSCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHHH
T ss_pred cCCCC-------CeEEEeeCCCcccccccccccc---cccccccccccccccCChhhhcC----CCCCcchhhHHHHHHH
Confidence 33 7899999999987654322110 01112235579999999999986 5688999999999999
Q ss_pred HHHHhCCCCCCCCCH---HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1040 LELLTLQVPYMGLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~~~~---~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|+|++|+.||.+... .+....+......... +......++.+.+++.+||+.||
T Consensus 206 ~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~l~~li~~~l~~dp 262 (296)
T 3uzp_A 206 MYFNLGSLPWQGLKAATKRQKYERISEKKMSTPI-----------------------EVLCKGYPSEFATYLNFCRSLRF 262 (296)
T ss_dssp HHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCH-----------------------HHHTTTSCHHHHHHHHHHHTSCT
T ss_pred HHHHhCCCCCCCcCchhhhhhhhhhcccccCCch-----------------------HHHHhhCCHHHHHHHHHHHhcCc
Confidence 999999999976322 1122222111000000 00011456779999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001143 1117 TERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~ 1132 (1141)
.+|||+.++++.+...
T Consensus 263 ~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 263 DDKPDYSYLRQLFRNL 278 (296)
T ss_dssp TCCCCHHHHHHHHHHH
T ss_pred CcCCCHHHHHHHHHHH
Confidence 9999999999887654
No 226
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.4e-38 Score=352.80 Aligned_cols=267 Identities=26% Similarity=0.371 Sum_probs=186.2
Q ss_pred CCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhh--CCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGA--LRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~--L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|++.+..+|+|++... ....+ .+|.+++.. ++||||+++++++.....
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~-------~~~~~----~~e~~~~~~~~~~h~~i~~~~~~~~~~~~ 71 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR-------EERSW----FREAEIYQTVMLRHENILGFIAADNKDNG 71 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-T-------THHHH----HHHHHHHTSTTCCC-CBCCEEEEEEEECS
T ss_pred ceeeehhhccCCCCeEEEEEEEcCcceEEEEeccc-------chhhH----HHHHHHHHHHhccCcceeeeeeecccCCC
Confidence 46899999999999999999999999999985311 11222 578888877 689999999999876431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCccccCCC
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELH--------SKHIMHRDIK 955 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLH--------s~gIvHrDLK 955 (1141)
.....++||||+++|+|.+++++ ..+++..++.++.|++.||.||| ++||+|||||
T Consensus 72 ----------~~~~~~lv~e~~~~g~L~~~l~~------~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlk 135 (303)
T 3gxj_A 72 ----------TWTQLWLVSDYHEHGSLFDYLNR------YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135 (303)
T ss_dssp ----------SSEEEEEEEECCTTCCHHHHHHH------CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCC
T ss_pred ----------ccceeEEEEeccCCCCHHHHHhc------cCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCC
Confidence 12356999999999999999976 25888999999999999999999 9999999999
Q ss_pred CCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC--CCCchhhHH
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN--LYGLEVDIW 1033 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~--~~s~ksDVW 1033 (1141)
|+|||++.+ +.+||+|||++.......... ........||+.|+|||++.+..... .++.++|||
T Consensus 136 p~Nil~~~~-------~~~kl~DFg~a~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diw 202 (303)
T 3gxj_A 136 SKNILVKKN-------GTCCIADLGLAVRHDSATDTI------DIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIY 202 (303)
T ss_dssp GGGC-CCTT-------CCC-BCCCCC-CCEETTTTEE------SCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHH
T ss_pred HHHeEECCC-------CCEEEeecCcceeccCCCccc------ccccCCCCcCccccCHhhhcCcccccccccCcchhHH
Confidence 999999887 789999999997654432211 01122346999999999987632111 334789999
Q ss_pred HHHHHHHHHHhC----------CCCCCCCCH-----HHHHHHH-HhCCCCCchhHHhhhccCccccccccCCCCCCchhh
Q 001143 1034 SYGCLLLELLTL----------QVPYMGLSE-----LEIHDLI-QMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAE 1097 (1141)
Q Consensus 1034 SLGviL~ELLTG----------k~Pf~~~~~-----~el~~~I-~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1097 (1141)
||||++|||++| +.||..... .+....+ .....+..+..+ ..
T Consensus 203 slG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 260 (303)
T 3gxj_A 203 AMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW----------------------QS 260 (303)
T ss_dssp C-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-CHHHHTTSCCCCCCCGGG----------------------GS
T ss_pred HHHHHHHHHHhcCCCccccceeeccccccCCCCccHHHHHHHHHHhhcCCCccccc----------------------cc
Confidence 999999999999 666643211 1112222 111111111110 11
Q ss_pred hhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1098 LETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1098 ~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
...++.+.+++.+||+.||.+|||+.++++.+.....
T Consensus 261 ~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~ 297 (303)
T 3gxj_A 261 CEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQ 297 (303)
T ss_dssp SHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CC
T ss_pred hhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhh
Confidence 2566789999999999999999999999999877644
No 227
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=5.5e-36 Score=338.09 Aligned_cols=261 Identities=21% Similarity=0.299 Sum_probs=195.7
Q ss_pred CCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC--CCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--HpNIVkllg~~~~~~ 882 (1141)
.+|++.+.||+|+||.||+|.+. +..+|+|+..... ......+.+ .+|+.++.+++ ||||+++++++....
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~----~~E~~~l~~l~~~~~~iv~~~~~~~~~~ 101 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEE--ADNQTLDSY----RNEIAYLNKLQQHSDKIIRLYDYEITDQ 101 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSS--CCHHHHHHH----HHHHHHHHHHGGGCTTBCCEEEEEECSS
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEecccc--ccccchHHH----HHHHHHHHhccccCCceEEEEEEeecCC
Confidence 45999999999999999999874 5668888865432 233333444 89999999996 699999999988655
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
..++||| +.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 102 --------------~~~lv~e-~~~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~ 161 (313)
T 3cek_A 102 --------------YIYMVME-CGNIDLNSWLKK-----KKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV 161 (313)
T ss_dssp --------------EEEEEEC-CCSEEHHHHHHH-----CSSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE
T ss_pred --------------EEEEEEe-cCCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE
Confidence 3599999 457899999986 34689999999999999999999999999999999999996
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-------CCCCCCchhhHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-------KPNLYGLEVDIWSY 1035 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-------~~~~~s~ksDVWSL 1035 (1141)
. +.+||+|||++......... .......||+.|+|||++.+.. ....++.++|||||
T Consensus 162 ~--------~~~kL~Dfg~~~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~sl 225 (313)
T 3cek_A 162 D--------GMLKLIDFGIANQMQPDTTS--------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSL 225 (313)
T ss_dssp T--------TEEEECCCSSSCC----------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHH
T ss_pred C--------CeEEEeeccccccccCcccc--------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHH
Confidence 4 68999999999765432111 1112346899999999987521 11367899999999
Q ss_pred HHHHHHHHhCCCCCCCCCHH-HHHHHHHh-CCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001143 1036 GCLLLELLTLQVPYMGLSEL-EIHDLIQM-GKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1036 GviL~ELLTGk~Pf~~~~~~-el~~~I~~-~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~ 1113 (1141)
||++|+|++|+.||...... .....+.. ......+ ...+..+.+++.+||+
T Consensus 226 G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~l~~li~~~l~ 278 (313)
T 3cek_A 226 GCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFP---------------------------DIPEKDLQDVLKCCLK 278 (313)
T ss_dssp HHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCC---------------------------CCSCHHHHHHHHHHTC
T ss_pred HHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCc---------------------------ccchHHHHHHHHHHcc
Confidence 99999999999999764322 22222211 1111000 0234578999999999
Q ss_pred cCCCCCCCHHHHHHHHHhhcCC
Q 001143 1114 ENPTERPTAGDLYEMFVARTSS 1135 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~~~s 1135 (1141)
.||.+|||+.|+++|+|+....
T Consensus 279 ~dp~~Rps~~ell~h~~~~~~~ 300 (313)
T 3cek_A 279 RDPKQRISIPELLAHPYVQIQT 300 (313)
T ss_dssp SSTTTSCCHHHHHTSHHHHCC-
T ss_pred CCcccCcCHHHHhcCccccCCC
Confidence 9999999999999999998654
No 228
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=5.1e-36 Score=345.81 Aligned_cols=288 Identities=18% Similarity=0.234 Sum_probs=202.8
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-----------CCC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-----------HSC 870 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-----------HpN 870 (1141)
...+|++.+.||+|+||+||+|++ .+..+|+|+... .....+. +.+|+.+++++. |||
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~----~~~e~~~l~~l~~~~~~~~~~~~~~~ 87 (373)
T 1q8y_A 17 KDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG-----DKVYTEA----AEDEIKLLQRVNDADNTKEDSMGANH 87 (373)
T ss_dssp TTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS-----CHHHHHH----HHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred cCCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC-----Cccchhh----hhHHHHHHHHhhcccccchhccccch
Confidence 456899999999999999999997 466778887542 1222233 378999988886 899
Q ss_pred ccceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-Cc
Q 001143 871 IVEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HI 949 (1141)
Q Consensus 871 IVkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gI 949 (1141)
|+++++++..... .....++||||+ +++|.+++... ....+++..+..|+.||+.||.|||++ ||
T Consensus 88 i~~~~~~~~~~~~----------~~~~~~lv~e~~-~~~L~~~~~~~---~~~~~~~~~~~~i~~qi~~aL~~lH~~~~i 153 (373)
T 1q8y_A 88 ILKLLDHFNHKGP----------NGVHVVMVFEVL-GENLLALIKKY---EHRGIPLIYVKQISKQLLLGLDYMHRRCGI 153 (373)
T ss_dssp BCCCCEEEEEEET----------TEEEEEEEECCC-CEEHHHHHHHT---TTSCCCHHHHHHHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhhccCC----------CCceEEEEEecC-CCCHHHHHHHh---hccCCcHHHHHHHHHHHHHHHHHHHhcCCE
Confidence 9999999876331 123569999999 79999999862 234599999999999999999999998 99
Q ss_pred cccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCch
Q 001143 950 MHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLE 1029 (1141)
Q Consensus 950 vHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~k 1029 (1141)
+||||||+|||++.++. ....+.+||+|||++...... .....||+.|+|||++.+ ..++.+
T Consensus 154 vH~Dikp~NIll~~~~~-~~~~~~~kl~Dfg~a~~~~~~-------------~~~~~~t~~y~aPE~~~~----~~~~~~ 215 (373)
T 1q8y_A 154 IHTDIKPENVLMEIVDS-PENLIQIKIADLGNACWYDEH-------------YTNSIQTREYRSPEVLLG----APWGCG 215 (373)
T ss_dssp ECSCCSGGGEEEEEEET-TTTEEEEEECCCTTCEETTBC-------------CCSCCSCGGGCCHHHHHT----CCCCTH
T ss_pred EecCCChHHeEEeccCC-CcCcceEEEcccccccccCCC-------------CCCCCCCccccCcHHHhC----CCCCch
Confidence 99999999999965421 012258999999999765431 113468999999999986 568899
Q ss_pred hhHHHHHHHHHHHHhCCCCCCCCC------HHHHHHHH-HhCCCCCchhHHhhhccCc-----cccccccCCCCC-----
Q 001143 1030 VDIWSYGCLLLELLTLQVPYMGLS------ELEIHDLI-QMGKRPRLTDELEALGSCH-----EHEVAQSGSGFE----- 1092 (1141)
Q Consensus 1030 sDVWSLGviL~ELLTGk~Pf~~~~------~~el~~~I-~~~~~p~l~~~l~~~~~~~-----~~~~~~~~~~~~----- 1092 (1141)
+|||||||++|+|++|+.||.+.. ..+....+ .....++ ..+....... ............
T Consensus 216 ~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (373)
T 1q8y_A 216 ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP--SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLE 293 (373)
T ss_dssp HHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCC--HHHHHHCTTHHHHBCC--CBSSCCCCCBCCHH
T ss_pred HhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCC--HHHHhccchhhhhcCCcchhcccccccccchh
Confidence 999999999999999999997543 22222222 1111111 1110000000 000000000000
Q ss_pred -----CchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHHHHHHhhcC
Q 001143 1093 -----KPEAELETLSFLVDVFRRCTEENPTERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1093 -----~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~~~ 1134 (1141)
........+.++.+||.+||+.||.+|||+.|+++|+|+...
T Consensus 294 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~ 340 (373)
T 1q8y_A 294 DVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 340 (373)
T ss_dssp HHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred hhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhcc
Confidence 000113567889999999999999999999999999999864
No 229
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=346.73 Aligned_cols=280 Identities=13% Similarity=0.089 Sum_probs=196.4
Q ss_pred CCCceEeeeecccCceEEEEEEEC-----CccEEEEEEecccCCCCh-HHHHH----hHHhHHHHHHHHhhCCCCCccce
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-----SADAAAKVRTLKVCGSSA-DEIRN----FEYSCLGEVRMLGALRHSCIVEM 874 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-----~~~vAvKI~~l~~~~~~~-~~~~~----~~~~~~~Ei~iL~~L~HpNIVkl 874 (1141)
-.+|++.+.||+|+||.||+|.+. +..+|+|+..... ... .+.+. ....+.+|+.++..++||||+++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~--~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~ 113 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQEN--GPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLF 113 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC---CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCC--cchHHHHHHHHHHhhhHHHHHHHhhccccccCccee
Confidence 457999999999999999999984 4567777754321 111 11111 11234688999999999999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 954 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDL 954 (1141)
++++..... .....++||||+ +++|.+++.. ...+++..++.|+.||+.||+|||++||+||||
T Consensus 114 ~~~~~~~~~----------~~~~~~lv~e~~-~~~L~~~l~~-----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dl 177 (345)
T 2v62_A 114 YGSGLTEFK----------GRSYRFMVMERL-GIDLQKISGQ-----NGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDI 177 (345)
T ss_dssp EEEEEEESS----------SCEEEEEEEECE-EEEHHHHCBG-----GGBCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred ecccccccC----------CCcEEEEEEecc-CCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCc
Confidence 999876210 123569999999 8999999875 237999999999999999999999999999999
Q ss_pred CCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHH
Q 001143 955 KSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWS 1034 (1141)
Q Consensus 955 KP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWS 1034 (1141)
||+|||++.++. +.+||+|||+++.+........ ..........||+.|+|||++.+ ..++.++||||
T Consensus 178 kp~NIll~~~~~-----~~~kL~Dfg~a~~~~~~~~~~~---~~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di~s 245 (345)
T 2v62_A 178 KAANLLLGYKNP-----DQVYLADYGLSYRYCPNGNHKQ---YQENPRKGHNGTIEFTSLDAHKG----VALSRRSDVEI 245 (345)
T ss_dssp SGGGEEEESSST-----TSEEECCCTTCEESSGGGCCCC---CCCCGGGCSCSCTTTCCHHHHHT----CCCCHHHHHHH
T ss_pred CHHHEEEccCCC-----CcEEEEeCCCceeccccccccc---chhccccccCCCccccCHHHhcC----CCCCchhhHHH
Confidence 999999987621 3899999999987653221100 00111134569999999999986 56889999999
Q ss_pred HHHHHHHHHhCCCCCCCC--CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhc
Q 001143 1035 YGCLLLELLTLQVPYMGL--SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCT 1112 (1141)
Q Consensus 1035 LGviL~ELLTGk~Pf~~~--~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL 1112 (1141)
|||++|+|++|+.||.+. ......... ....+.++...... . .....+.++.+++.+||
T Consensus 246 lG~il~ell~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----------~-------~~~~~~~~l~~li~~~l 306 (345)
T 2v62_A 246 LGYCMLRWLCGKLPWEQNLKDPVAVQTAK-TNLLDELPQSVLKW-----------A-------PSGSSCCEIAQFLVCAH 306 (345)
T ss_dssp HHHHHHHHHHSSCTTGGGTTCHHHHHHHH-HHHHHTTTHHHHHH-----------S-------CTTSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCccccccccHHHHHHH-HhhcccccHHHHhh-----------c-------cccccHHHHHHHHHHHh
Confidence 999999999999999642 222222111 11111111111100 0 00145667999999999
Q ss_pred ccCCCCCCCHHHHHHHHHhhc
Q 001143 1113 EENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1113 ~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
..||.+|||+.+|++.+....
T Consensus 307 ~~dp~~Rps~~~l~~~L~~~~ 327 (345)
T 2v62_A 307 SLAYDEKPNYQALKKILNPHG 327 (345)
T ss_dssp TCCTTCCCCHHHHHHHHCTTC
T ss_pred hcCcccCCCHHHHHHHHhccC
Confidence 999999999999999987643
No 230
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=338.13 Aligned_cols=263 Identities=24% Similarity=0.375 Sum_probs=187.3
Q ss_pred CCCCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 803 GSFPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 803 ~~~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
..+.+|++.+.||+|+||.||+|.+. +..+|+|+.... . .......+ +..+..+++.++||||+++++++.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~-~~~~~~~~---~~~~~~~~~~~~h~~i~~~~~~~~~ 95 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRS--G-NKEENKRI---LMDLDVVLKSHDCPYIVQCFGTFIT 95 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETT--S-CHHHHHHH---HHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEeccc--c-cchHHHHH---HHHHHHHHHhcCCCceeeEEEEEec
Confidence 45778999999999999999999984 667888876432 1 12222221 2445556778899999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCCe
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-HIMHRDIKSENI 959 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-gIvHrDLKP~NI 959 (1141)
.+ ..++||||+ ++.+..+.... ...+++..+..++.||+.||.|||++ ||+||||||+||
T Consensus 96 ~~--------------~~~lv~e~~-~~~~~~l~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Ni 156 (318)
T 2dyl_A 96 NT--------------DVFIAMELM-GTCAEKLKKRM----QGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNI 156 (318)
T ss_dssp SS--------------EEEEEECCC-SEEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGE
T ss_pred CC--------------cEEEEEecc-CCcHHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHE
Confidence 54 359999999 56666665531 34699999999999999999999995 999999999999
Q ss_pred eeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc-CCCCCCchhhHHHHHHH
Q 001143 960 LIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH-KPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 960 Lld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~~~s~ksDVWSLGvi 1038 (1141)
+++.+ +.+||+|||++....... ......||+.|+|||++.... ....++.++|||||||+
T Consensus 157 l~~~~-------~~~kl~dfg~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~i 218 (318)
T 2dyl_A 157 LLDER-------GQIKLCDFGISGRLVDDK-----------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218 (318)
T ss_dssp EECTT-------SCEEECCCTTC-------------------------CCTTCCHHHHC--------CCTHHHHHHHHHH
T ss_pred EECCC-------CCEEEEECCCchhccCCc-----------cccccCCCccccChhhcccccccccCCccccchhhHHHH
Confidence 99887 789999999987553321 112345899999999985321 12467899999999999
Q ss_pred HHHHHhCCCCCCCC-CHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLTLQVPYMGL-SELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~-~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|+|++|+.||... ...+....+.....+..+.. ...+..+.+++.+||+.||.
T Consensus 219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~l~~li~~~l~~dp~ 273 (318)
T 2dyl_A 219 LVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGH-------------------------MGFSGDFQSFVKDCLTKDHR 273 (318)
T ss_dssp HHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSS-------------------------SCCCHHHHHHHHHHTCSCTT
T ss_pred HHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCcc-------------------------CCCCHHHHHHHHHHccCChh
Confidence 99999999999763 34445555544433322110 03456799999999999999
Q ss_pred CCCCHHHHHHHHHhhc
Q 001143 1118 ERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~~ 1133 (1141)
+|||+.++++|+|+..
T Consensus 274 ~Rps~~~ll~h~~~~~ 289 (318)
T 2dyl_A 274 KRPKYNKLLEHSFIKR 289 (318)
T ss_dssp TSCCHHHHTTSHHHHH
T ss_pred HCcCHHHHhhCHHHHh
Confidence 9999999999999863
No 231
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-36 Score=352.11 Aligned_cols=290 Identities=20% Similarity=0.225 Sum_probs=206.7
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.++||+|+||+||+|++. +..||+|+....... ...+ .+.+|+.++++++||||+++++++.....
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~---~~~~----~~~~E~~~l~~l~hpnIv~~~~~~~~~~~ 81 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFL---RPVD----VQMREFEVLKKLNHKNIVKLFAIEEETTT 81 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGG---SCHH----HHHHHHHHHHHCCCTTBCCEEEEEECTTT
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEecccccc---chHH----HHHHHHHHHHhcCCCCCCeEEEeeccCCC
Confidence 46999999999999999999985 667888876432111 1122 23789999999999999999999876431
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
...++||||+++++|.++++... ....+++..++.|+.||+.||+|||++||+||||||+|||+..
T Consensus 82 ------------~~~~lv~e~~~~g~L~~~l~~~~--~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~ 147 (396)
T 4eut_A 82 ------------RHKVLIMEFCPCGSLYTVLEEPS--NAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVI 147 (396)
T ss_dssp ------------CCEEEEECCCTTEEHHHHTTSGG--GTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEE
T ss_pred ------------CeeEEEEecCCCCCHHHHHHhhh--cccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEee
Confidence 14599999999999999997532 1234999999999999999999999999999999999999822
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccC----CCCCCchhhHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHK----PNLYGLEVDIWSYGCLL 1039 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~----~~~~s~ksDVWSLGviL 1039 (1141)
. ..+.+.+||+|||+++....... .....||+.|+|||++.+... ...++.++|||||||++
T Consensus 148 ~---~~~~~~~kL~DFG~a~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il 213 (396)
T 4eut_A 148 G---EDGQSVYKLTDFGAARELEDDEQ-----------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTF 213 (396)
T ss_dssp C---TTSCEEEEECCGGGCEECCCGGG-----------SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHH
T ss_pred c---CCCceeEEEecCCCceEccCCCc-----------cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHH
Confidence 1 01126799999999976543221 113469999999999864210 02456899999999999
Q ss_pred HHHHhCCCCCCC----CCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1040 LELLTLQVPYMG----LSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1040 ~ELLTGk~Pf~~----~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
|||++|+.||.. ....+....+..+..+............... + ....+ .........+..+.+++.+||+.|
T Consensus 214 ~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~-~~~~~-~~~~l~~~~~~~l~~ll~~~L~~d 290 (396)
T 4eut_A 214 YHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPID-W-SGDMP-VSCSLSRGLQVLLTPVLANILEAD 290 (396)
T ss_dssp HHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEE-E-ESSCC-TTCSSCHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcc-c-CccCC-cccccchHHHhhchHHHHHhhccC
Confidence 999999999963 2233455555544443322111100000000 0 00000 011122367788999999999999
Q ss_pred CCCCCCHHHHHHHHHhhc
Q 001143 1116 PTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~~~ 1133 (1141)
|++||++.|+++++....
T Consensus 291 P~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 291 QEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp TTTSCCHHHHHHHHHHHH
T ss_pred hhhhccHHHHHHHHHHHh
Confidence 999999999999886643
No 232
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=5.4e-36 Score=339.69 Aligned_cols=273 Identities=21% Similarity=0.280 Sum_probs=183.8
Q ss_pred CCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~ 882 (1141)
.+|++.++||+|+||.||+|++ .+..+|+|+.... .....+. +.+|+.++.++. ||||+++++++....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~----~~~e~~~l~~l~~h~~iv~~~~~~~~~~ 99 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN----EEEKNRA----IIQEVCFMKKLSGHPNIVQFCSAASIGK 99 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES----SHHHHHH----HHHHHHHHHHHTTSTTBCCEEEEEEECT
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC----chHHHHH----HHHHHHHHHHhccCCChhhccccccccc
Confidence 3699999999999999999998 5667888875322 2233333 379999999996 999999999986432
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCCee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH--IMHRDIKSENIL 960 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g--IvHrDLKP~NIL 960 (1141)
.. ........++||||+. |+|.+++..... ...+++..++.|+.||+.||.|||++| |+||||||+|||
T Consensus 100 ~~------~~~~~~~~~lv~e~~~-g~L~~~l~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl 170 (337)
T 3ll6_A 100 EE------SDTGQAEFLLLTELCK-GQLVEFLKKMES--RGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLL 170 (337)
T ss_dssp TT------STTSSEEEEEEEECCS-EEHHHHHHHHHT--TCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCE
T ss_pred cc------cccCCceEEEEEEecC-CCHHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEE
Confidence 21 1122345799999996 799999876432 346999999999999999999999999 999999999999
Q ss_pred eecccccCCCCCeEEEeecccccccccccccccccc--CCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAH--RGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~--~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
++.+ +.+||+|||+++............. ..........||+.|+|||++... ....++.++|||||||+
T Consensus 171 ~~~~-------~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~~~~~Dv~slG~i 242 (337)
T 3ll6_A 171 LSNQ-------GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLY-SNFPIGEKQDIWALGCI 242 (337)
T ss_dssp ECTT-------SCEEBCCCTTCBCCSSCC-------------------------------CC-TTSCSSHHHHHHHHHHH
T ss_pred ECCC-------CCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhcc-ccCCCChHHhHHHHHHH
Confidence 9987 7899999999986544221110000 000111234589999999998421 12567899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|+|++|+.||............ ..... ....+..+.+|+.+||+.||.+
T Consensus 243 l~el~~g~~p~~~~~~~~~~~~~---~~~~~---------------------------~~~~~~~~~~li~~~l~~~p~~ 292 (337)
T 3ll6_A 243 LYLLCFRQHPFEDGAKLRIVNGK---YSIPP---------------------------HDTQYTVFHSLIRAMLQVNPEE 292 (337)
T ss_dssp HHHHHHSSCCC---------------CCCCT---------------------------TCCSSGGGHHHHHHHSCSSGGG
T ss_pred HHHHHhCCCCCcchhHHHhhcCc---ccCCc---------------------------ccccchHHHHHHHHHccCChhh
Confidence 99999999999754332221110 00000 0022344889999999999999
Q ss_pred CCCHHHHHHHHHhhc
Q 001143 1119 RPTAGDLYEMFVART 1133 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~ 1133 (1141)
|||+.|++++++...
T Consensus 293 Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 293 RLSIAEVVHQLQEIA 307 (337)
T ss_dssp SCCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHH
Confidence 999999999997753
No 233
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=5.3e-36 Score=344.66 Aligned_cols=278 Identities=15% Similarity=0.120 Sum_probs=197.3
Q ss_pred CCCceEeeeecccCceEEEEEEEC----------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccce
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG----------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEM 874 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~----------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkl 874 (1141)
-.+|++.+.||+|+||.||+|++. +..+|+|+.... +. +.+|+.++++++||||+++
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~---------~~----~~~E~~~l~~l~h~niv~~ 107 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD---------GR----LFNEQNFFQRAAKPLQVNK 107 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT---------ST----HHHHHHHHHHHCCHHHHHH
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc---------ch----HHHHHHHHHHhcccchhhh
Confidence 367999999999999999999985 467888886422 12 3789999999999999984
Q ss_pred eeeEecCCCC--CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 001143 875 YGHKISSKWL--PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHR 952 (1141)
Q Consensus 875 lg~~~~~~~~--~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHr 952 (1141)
++.+...... +...+.........++||||+ +++|.+++... ....+++..++.|+.||+.||.|||++||+||
T Consensus 108 ~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~ 183 (352)
T 2jii_A 108 WKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS---PKHVLSERSVLQVACRLLDALEFLHENEYVHG 183 (352)
T ss_dssp HHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS---GGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCS
T ss_pred hhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhC---CcCCCCHHHHHHHHHHHHHHHHHHHhCCccCC
Confidence 4332211000 000000000112569999999 89999999862 12469999999999999999999999999999
Q ss_pred CCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhH
Q 001143 953 DIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDI 1032 (1141)
Q Consensus 953 DLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDV 1032 (1141)
||||+|||++.++. ..+||+|||+++.+......... .........||+.|+|||++.+ ..++.++||
T Consensus 184 Dikp~NIl~~~~~~-----~~~kl~Dfg~a~~~~~~~~~~~~---~~~~~~~~~gt~~y~aPE~~~~----~~~~~~~Di 251 (352)
T 2jii_A 184 NVTAENIFVDPEDQ-----SQVTLAGYGFAFRYCPSGKHVAY---VEGSRSPHEGDLEFISMDLHKG----CGPSRRSDL 251 (352)
T ss_dssp CCCGGGEEEETTEE-----EEEEECCGGGCBCSSGGGCCCCC---CTTSSCTTCSCTTTCCHHHHTT----CCCCHHHHH
T ss_pred CCCHHHEEEcCCCC-----ceEEEecCcceeeccCCCccccc---cccccccccCCccccCHHHHcc----CCCCchhhH
Confidence 99999999998721 28999999999876543211100 0111234479999999999986 568899999
Q ss_pred HHHHHHHHHHHhCCCCCCCCC--HHHHHHHHH--hCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHH
Q 001143 1033 WSYGCLLLELLTLQVPYMGLS--ELEIHDLIQ--MGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVF 1108 (1141)
Q Consensus 1033 WSLGviL~ELLTGk~Pf~~~~--~~el~~~I~--~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI 1108 (1141)
|||||++|+|++|+.||.... ...+..... ....+.+... .. .....+..+.+++
T Consensus 252 ~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~------~~~~~~~~l~~li 310 (352)
T 2jii_A 252 QSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGP---------------CG------HWIRPSETLQKYL 310 (352)
T ss_dssp HHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECT---------------TS------CEECCCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhh---------------cc------ccCCCcHHHHHHH
Confidence 999999999999999997642 333332221 1111111000 00 0013457799999
Q ss_pred HHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1109 RRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1109 ~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.+||..||.+|||+.++++.+...
T Consensus 311 ~~~l~~dp~~Rps~~~l~~~L~~~ 334 (352)
T 2jii_A 311 KVVMALTYEEKPPYAMLRNNLEAL 334 (352)
T ss_dssp HHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHHhCChhhCCCHHHHHHHHHHH
Confidence 999999999999999999988664
No 234
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1e-35 Score=335.99 Aligned_cols=278 Identities=18% Similarity=0.179 Sum_probs=201.3
Q ss_pred CCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 804 SFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 804 ~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
.-.+|++.+.||+|+||.||+|++ .+..+|+|+.... .....+. +.+|+.++++++||||+++++++...
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~----~~~E~~~l~~l~h~~iv~~~~~~~~~ 98 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH----EQQDREE----AQREADMHRLFNHPNILRLVAYCLRE 98 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES----SHHHHHH----HHHHHHHHHTCCCTTBCCCCEEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC----CHHHHHH----HHHHHHHHhhcCCCCeeeEEEEEEec
Confidence 345799999999999999999997 4667888875432 2233333 37999999999999999999998742
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
.. .....++||||+++++|.+++...... ...+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 99 ~~----------~~~~~~lv~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~ 167 (317)
T 2buj_A 99 RG----------AKHEAWLLLPFFKRGTLWNEIERLKDK-GNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL 167 (317)
T ss_dssp ET----------TEEEEEEEEECCTTCBHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred cC----------CCceeEEEEEeCCCCcHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE
Confidence 11 123569999999999999999874333 3579999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||.+.............. .........||+.|+|||++.+.. ...++.++|||||||++|+
T Consensus 168 ~~~-------~~~kl~dfg~~~~~~~~~~~~~~~~-~~~~~~~~~gt~~y~aPE~~~~~~-~~~~~~~~Di~slG~il~e 238 (317)
T 2buj_A 168 GDE-------GQPVLMDLGSMNQACIHVEGSRQAL-TLQDWAAQRCTISYRAPELFSVQS-HCVIDERTDVWSLGCVLYA 238 (317)
T ss_dssp CTT-------SCEEECCCSSCEESCEEEESHHHHH-HHHHHHHHHSCGGGCCGGGSSCCS-EEEECTHHHHHHHHHHHHH
T ss_pred cCC-------CCEEEEecCcchhcccccccccccc-cccccccccCCcccCCHhHhccCC-CcCCCchhhHHHHHHHHHH
Confidence 887 7899999999875432111000000 000001234799999999986521 1235789999999999999
Q ss_pred HHhCCCCCCCCCH--HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1042 LLTLQVPYMGLSE--LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1042 LLTGk~Pf~~~~~--~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
|++|+.||..... ......+....... . ....+..+.+++.+||+.||.+|
T Consensus 239 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------------------~---~~~~~~~l~~li~~~l~~dp~~R 291 (317)
T 2buj_A 239 MMFGEGPYDMVFQKGDSVALAVQNQLSIP------------------------Q---SPRHSSALWQLLNSMMTVDPHQR 291 (317)
T ss_dssp HHHSSCTTHHHHHTTSCHHHHHHCC--CC------------------------C---CTTSCHHHHHHHHHHTCSSGGGS
T ss_pred HHhCCCChhhhhcccchhhHHhhccCCCC------------------------c---cccCCHHHHHHHHHHhhcChhhC
Confidence 9999999953100 01111111110000 0 01455679999999999999999
Q ss_pred CCHHHHHHHHHhhcCCC
Q 001143 1120 PTAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~s~ 1136 (1141)
||+.++++++.......
T Consensus 292 ps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 292 PHIPLLLSQLEALQPPA 308 (317)
T ss_dssp CCHHHHHHHHHHTCCCC
T ss_pred CCHHHHHHHhhhcCCCC
Confidence 99999999998875543
No 235
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.4e-36 Score=345.93 Aligned_cols=264 Identities=25% Similarity=0.279 Sum_probs=176.3
Q ss_pred CCCceEee-eecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHH-HHHhhCCCCCccceeeeEec
Q 001143 805 FPSLSSCD-EAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEV-RMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 805 ~~~y~i~~-~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei-~iL~~L~HpNIVkllg~~~~ 880 (1141)
.++|.+.+ +||+|+||+||+|.+. +..+|+|+.... ... .+|+ ..++.++||||+++++++..
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~--------~~e~~~~~~~~~h~~i~~~~~~~~~ 93 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKA--------RQEVDHHWQASGGPHIVCILDVYEN 93 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHH--------HHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHH--------HHHHHHHHHhcCCCChHHHHHHHhh
Confidence 45798855 6999999999999985 677888875321 111 2333 33566789999999999875
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
... .....++||||+++|+|.+++.. .....+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus 94 ~~~----------~~~~~~lv~e~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIl 160 (336)
T 3fhr_A 94 MHH----------GKRCLLIIMECMEGGELFSRIQE---RGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLL 160 (336)
T ss_dssp EET----------TEEEEEEEEECCTTEEHHHHHHT---C-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEE
T ss_pred ccC----------CCceEEEEEeccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence 221 12246999999999999999976 33346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.++ ..+.+||+|||++....... .....||+.|+|||++.+ ..++.++|||||||++|
T Consensus 161 l~~~~----~~~~~kl~Dfg~~~~~~~~~------------~~~~~~t~~y~aPE~~~~----~~~~~~~Di~slG~il~ 220 (336)
T 3fhr_A 161 YTSKE----KDAVLKLTDFGFAKETTQNA------------LQTPCYTPYYVAPEVLGP----EKYDKSCDMWSLGVIMY 220 (336)
T ss_dssp ESCSS----TTCCEEECCCTTCEEC--------------------------------------CHHHHHHHHHHHHHHHH
T ss_pred EEecC----CCceEEEeccccceeccccc------------cccCCCCcCccChhhhCC----CCCCchhhHHHHHHHHH
Confidence 97641 12679999999997543211 123468999999999865 56789999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|++|..||...........+....... ......+ .....+..+.+|+.+||+.||.+||
T Consensus 221 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~~~~~~li~~~L~~dP~~Rp 280 (336)
T 3fhr_A 221 ILLCGFPPFYSNTGQAISPGMKRRIRLG-------------------QYGFPNP-EWSEVSEDAKQLIRLLLKTDPTERL 280 (336)
T ss_dssp HHHHSSCCC----------------------------------------CCCTT-TSTTCCHHHHHHHHHHSCSSGGGSC
T ss_pred HHHHCCCCCCCccchhhhhhHHHhhhcc-------------------ccccCch-hhccCCHHHHHHHHHHCCCChhHCc
Confidence 9999999997644332211110000000 0000000 0014567799999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
|+.|+++|+|+...
T Consensus 281 t~~ell~hp~~~~~ 294 (336)
T 3fhr_A 281 TITQFMNHPWINQS 294 (336)
T ss_dssp CHHHHHHSHHHHTG
T ss_pred CHHHHhcCcccccc
Confidence 99999999999754
No 236
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=4.7e-36 Score=338.20 Aligned_cols=253 Identities=22% Similarity=0.258 Sum_probs=190.5
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC----CCCCccceeeeE
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL----RHSCIVEMYGHK 878 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L----~HpNIVkllg~~ 878 (1141)
..+|++.+.||+|+||.||+|++ .+..+|+|+..... ............+.+|+.++.++ +||||+++++++
T Consensus 30 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 30 EAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNR--VLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp ---CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTT--TC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEeccc--ccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 45799999999999999999988 45568888754322 11111001112236799999988 899999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEee-ccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEY-VKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSE 957 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy-~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~ 957 (1141)
...+.. ++|||| +.+++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+
T Consensus 108 ~~~~~~--------------~~v~e~~~~~~~L~~~l~~-----~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~ 168 (312)
T 2iwi_A 108 ETQEGF--------------MLVLERPLPAQDLFDYITE-----KGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDE 168 (312)
T ss_dssp -----C--------------EEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGG
T ss_pred ecCCeE--------------EEEEEecCCCCCHHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChh
Confidence 765533 999999 789999999976 236999999999999999999999999999999999
Q ss_pred Ceeee-cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHH
Q 001143 958 NILID-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYG 1036 (1141)
Q Consensus 958 NILld-~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLG 1036 (1141)
||+++ .+ +.+||+|||++....... .....||+.|+|||++.+. ...+.++||||||
T Consensus 169 Nil~~~~~-------~~~kl~dfg~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~---~~~~~~~Di~slG 226 (312)
T 2iwi_A 169 NILIDLRR-------GCAKLIDFGSGALLHDEP------------YTDFDGTRVYSPPEWISRH---QYHALPATVWSLG 226 (312)
T ss_dssp GEEEETTT-------TEEEECCCSSCEECCSSC------------BCCCCSCTTTSCHHHHHHS---CBCHHHHHHHHHH
T ss_pred hEEEeCCC-------CeEEEEEcchhhhcccCc------------ccccCCcccccCceeeecC---CCCCccchHHHHH
Confidence 99998 55 789999999997654321 1234589999999998762 2334689999999
Q ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCC
Q 001143 1037 CLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1037 viL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
|++|+|++|+.||... .+.. .... .++ ...+..+.++|.+||+.||
T Consensus 227 ~il~~l~~g~~pf~~~--~~~~----~~~~-~~~---------------------------~~~~~~~~~li~~~l~~~p 272 (312)
T 2iwi_A 227 ILLYDMVCGDIPFERD--QEIL----EAEL-HFP---------------------------AHVSPDCCALIRRCLAPKP 272 (312)
T ss_dssp HHHHHHHHSSCSCCSH--HHHH----HTCC-CCC---------------------------TTSCHHHHHHHHHHTCSST
T ss_pred HHHHHHHHCCCCCCCh--HHHh----hhcc-CCc---------------------------ccCCHHHHHHHHHHccCCh
Confidence 9999999999999742 1111 1110 000 1445678999999999999
Q ss_pred CCCCCHHHHHHHHHhhcC
Q 001143 1117 TERPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~~~ 1134 (1141)
++|||+.|+++|+|+...
T Consensus 273 ~~Rps~~e~l~~~~~~~~ 290 (312)
T 2iwi_A 273 SSRPSLEEILLDPWMQTP 290 (312)
T ss_dssp TTSCCHHHHHHSTTTCC-
T ss_pred hhCcCHHHHhcChhhcCc
Confidence 999999999999999864
No 237
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.7e-35 Score=336.62 Aligned_cols=274 Identities=23% Similarity=0.321 Sum_probs=199.3
Q ss_pred CCCceEeeeecccCceEEEEEEE------CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF------GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~------~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
..+|++.+.||+|+||.||+|++ .+..||+|+.... .....+.+ .+|+.++++++||||+++++++
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~~----~~E~~~l~~l~h~~iv~~~~~~ 111 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS----TEEHLRDF----EREIEILKSLQHDNIVKYKGVC 111 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC----CSHHHHHH----HHHHHHHHTCCCTTBCCEEEEE
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC----CHHHHHHH----HHHHHHHHhCCCCCeeeEEEEE
Confidence 45699999999999999999985 3566777775321 22333334 8999999999999999999998
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
..... ...++||||+++++|.+++... ...+++..+..++.||+.||.|||++||+||||||+|
T Consensus 112 ~~~~~------------~~~~lv~e~~~~~~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~N 175 (326)
T 2w1i_A 112 YSAGR------------RNLKLIMEYLPYGSLRDYLQKH----KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRN 175 (326)
T ss_dssp CC----------------CCEEEECCCTTCBHHHHHHHS----TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred EecCC------------CceEEEEECCCCCCHHHHHHhc----ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcce
Confidence 65321 1349999999999999999762 2469999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
|+++.+ +.+||+|||++........... ......++..|+|||++.+ ..++.++||||||++
T Consensus 176 Ili~~~-------~~~kL~Dfg~~~~~~~~~~~~~-------~~~~~~~~~~y~aPE~~~~----~~~~~~~Di~slG~i 237 (326)
T 2w1i_A 176 ILVENE-------NRVKIGDFGLTKVLPQDKEYYK-------VKEPGESPIFWYAPESLTE----SKFSVASDVWSFGVV 237 (326)
T ss_dssp EEEEET-------TEEEECCCTTCEECCSSCSEEE-------CSSCCSCCGGGCCHHHHHH----CEEEHHHHHHHHHHH
T ss_pred EEEcCC-------CcEEEecCcchhhccccccccc-------cccCCCCceeEECchhhcC----CCCCchhhHHHHHHH
Confidence 999987 7899999999976544221100 1123357888999999976 457899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchh-HHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTD-ELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPT 1117 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~ 1117 (1141)
+|+|++|..||... ..+....+.......... .+.. .......... ...++.++.+++.+||..||.
T Consensus 238 l~el~tg~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~ 305 (326)
T 2w1i_A 238 LYELFTYIEKSKSP-PAEFMRMIGNDKQGQMIVFHLIE--------LLKNNGRLPR---PDGCPDEIYMIMTECWNNNVN 305 (326)
T ss_dssp HHHHHHTTCGGGSH-HHHHHHHHCTTCCTHHHHHHHHH--------HHHTTCCCCC---CTTCCHHHHHHHHHHSCSSGG
T ss_pred HHHHHhcCCCCCCC-HHHHHHhhccccchhhhHHHHHH--------HhhcCCCCCC---CCcccHHHHHHHHHHcCCChh
Confidence 99999999998642 112222211111000000 0000 0000000000 125667899999999999999
Q ss_pred CCCCHHHHHHHHHhh
Q 001143 1118 ERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1118 ~RPSa~ElL~~L~~~ 1132 (1141)
+|||+.|+++.+...
T Consensus 306 ~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 306 QRPSFRDLALRVDQI 320 (326)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCcCHHHHHHHHHHH
Confidence 999999999987654
No 238
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=3.3e-36 Score=342.02 Aligned_cols=253 Identities=21% Similarity=0.232 Sum_probs=197.2
Q ss_pred CCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC--CCCccceeeeEec
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKIS 880 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--HpNIVkllg~~~~ 880 (1141)
..+|++.+.||+|+||.||+|.+ .+..||+|+........... . ....++.+|+.++++++ ||||+++++++..
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~-~-~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~ 119 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGE-L-PNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER 119 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEE-C-TTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhh-h-hhhhHHHHHHHHHHhhccCCCCceEEEEEEec
Confidence 46799999999999999999998 45668888765442211000 0 00112368999999996 6999999999986
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccC-CCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCe
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKG-GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENI 959 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~g-gSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NI 959 (1141)
.+ ..++||||+.+ ++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus 120 ~~--------------~~~lv~e~~~~~~~L~~~l~~-----~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NI 180 (320)
T 3a99_A 120 PD--------------SFVLILERPEPVQDLFDFITE-----RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENI 180 (320)
T ss_dssp SS--------------EEEEEEECCSSEEEHHHHHHH-----HCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGE
T ss_pred CC--------------cEEEEEEcCCCCccHHHHHhc-----cCCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHE
Confidence 55 34999999976 899999976 24689999999999999999999999999999999999
Q ss_pred eee-cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 960 LID-LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 960 Lld-~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
|++ .+ +.+||+|||++....... .....||+.|+|||++.+. ..++.++|||||||+
T Consensus 181 ll~~~~-------~~~kL~Dfg~~~~~~~~~------------~~~~~gt~~y~aPE~~~~~---~~~~~~~Di~slG~i 238 (320)
T 3a99_A 181 LIDLNR-------GELKLIDFGSGALLKDTV------------YTDFDGTRVYSPPEWIRYH---RYHGRSAAVWSLGIL 238 (320)
T ss_dssp EEETTT-------TEEEECCCTTCEECCSSC------------BCCCCSCGGGSCHHHHHHS---CBCHHHHHHHHHHHH
T ss_pred EEeCCC-------CCEEEeeCcccccccccc------------ccCCCCCccCCChHHhccC---CCCCccchHHhHHHH
Confidence 998 44 789999999997654321 1134589999999998762 234688999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCC
Q 001143 1039 LLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTE 1118 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~ 1118 (1141)
+|+|++|+.||... .+ +...... . ....+.++.++|.+||+.||.+
T Consensus 239 l~el~~g~~pf~~~--~~----~~~~~~~-~---------------------------~~~~~~~~~~li~~~l~~dp~~ 284 (320)
T 3a99_A 239 LYDMVCGDIPFEHD--EE----IIRGQVF-F---------------------------RQRVSSECQHLIRWCLALRPSD 284 (320)
T ss_dssp HHHHHHSSCSCCSH--HH----HHHCCCC-C---------------------------SSCCCHHHHHHHHHHTCSSGGG
T ss_pred HHHHHHCCCCCCCh--hh----hhccccc-c---------------------------cccCCHHHHHHHHHHccCChhh
Confidence 99999999999752 11 1111100 0 0134567999999999999999
Q ss_pred CCCHHHHHHHHHhhcC
Q 001143 1119 RPTAGDLYEMFVARTS 1134 (1141)
Q Consensus 1119 RPSa~ElL~~L~~~~~ 1134 (1141)
|||+.|+++|+|+...
T Consensus 285 Rps~~~ll~hp~~~~~ 300 (320)
T 3a99_A 285 RPTFEEIQNHPWMQDV 300 (320)
T ss_dssp SCCHHHHHTSGGGSSC
T ss_pred CcCHHHHhcCHhhcCc
Confidence 9999999999999753
No 239
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.3e-35 Score=365.95 Aligned_cols=257 Identities=21% Similarity=0.338 Sum_probs=203.0
Q ss_pred CCCceEeeeecccCceEEEEEEECC---ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGS---ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~---~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~ 881 (1141)
..+|++.+.||+|+||.||+|.+.. ...+++++..+.. ......+ .+.+|+.++++++||||+++++++.+.
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~----~~~~E~~~l~~l~HpnIv~l~~~~~~~ 463 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVRE----KFLQEALTMRQFDHPHIVKLIGVITEN 463 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHH----HHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHH----HHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 4579999999999999999999843 2334444434322 1222223 348999999999999999999998532
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
..++||||+++|+|.++++. ....+++..++.++.||+.||.|||++||+||||||+|||+
T Consensus 464 ---------------~~~lv~E~~~~g~L~~~l~~----~~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl 524 (656)
T 2j0j_A 464 ---------------PVWIIMELCTLGELRSFLQV----RKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLV 524 (656)
T ss_dssp ---------------SCEEEEECCTTCBHHHHHHH----TTTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred ---------------ceEEEEEcCCCCcHHHHHHh----ccCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEE
Confidence 23899999999999999975 23368999999999999999999999999999999999999
Q ss_pred ecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHH
Q 001143 962 DLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLE 1041 (1141)
Q Consensus 962 d~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~E 1041 (1141)
+.+ +.+||+|||+++........ ......+|+.|+|||++.+ ..++.++|||||||++||
T Consensus 525 ~~~-------~~vkL~DFG~a~~~~~~~~~---------~~~~~~~t~~y~aPE~~~~----~~~~~~~DiwSlG~il~e 584 (656)
T 2j0j_A 525 SSN-------DCVKLGDFGLSRYMEDSTYY---------KASKGKLPIKWMAPESINF----RRFTSASDVWMFGVCMWE 584 (656)
T ss_dssp EET-------TEEEECCCCCCCSCCC-------------------CCGGGCCHHHHHH----CCCCHHHHHHHHHHHHHH
T ss_pred eCC-------CCEEEEecCCCeecCCCcce---------eccCCCCCcceeCHHHhcC----CCCCchhhHHHHHHHHHH
Confidence 987 88999999999765432111 1123357889999999976 568899999999999999
Q ss_pred HHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1042 LLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1042 LLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
|++ |..||.+....+....+..+..+..+. .+++.+.+++.+||..||.+||
T Consensus 585 llt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~l~~li~~~l~~dP~~RP 637 (656)
T 2j0j_A 585 ILMHGVKPFQGVKNNDVIGRIENGERLPMPP---------------------------NCPPTLYSLMTKCWAYDPSRRP 637 (656)
T ss_dssp HHTTSCCTTTTCCHHHHHHHHHHTCCCCCCT---------------------------TCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHcCCCCCCCCCHHHHHHHHHcCCCCCCCc---------------------------cccHHHHHHHHHHcCCChhHCc
Confidence 997 999999888887777776554433221 4556799999999999999999
Q ss_pred CHHHHHHHHHhh
Q 001143 1121 TAGDLYEMFVAR 1132 (1141)
Q Consensus 1121 Sa~ElL~~L~~~ 1132 (1141)
|+.++++.+...
T Consensus 638 s~~el~~~L~~i 649 (656)
T 2j0j_A 638 RFTELKAQLSTI 649 (656)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 999999988653
No 240
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=5.5e-36 Score=347.16 Aligned_cols=278 Identities=14% Similarity=0.076 Sum_probs=182.4
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC--CCCCcccee-----
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL--RHSCIVEMY----- 875 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L--~HpNIVkll----- 875 (1141)
...|++.++||+|+||+||+|.+. +..+|+|+...... ......+ .+.+|+.++..+ +||||++++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~----~~~~E~~~~~~l~~~hp~iv~~~~~~~~ 135 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAE-NSRSELE----RLHEATFAAARLLGESPEEARDRRRLLL 135 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCST-THHHHHH----HHHHHHHHHHHHHC----------CBCC
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEeccc-ccccHHH----HHHHHHHHHHHhcccChhhhhhceeEEe
Confidence 345999999999999999999985 56688887654321 1112222 336775444444 699988765
Q ss_pred --eeEecCCCCC---CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHH------HHHHHHHHHHHHHH
Q 001143 876 --GHKISSKWLP---SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLA------LFIAQDVAAALVEL 944 (1141)
Q Consensus 876 --g~~~~~~~~~---~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i------~~Ia~QIa~gL~yL 944 (1141)
+++...+.-. ..++.........++||||++ ++|.+++.... ..+++..+ ..++.||+.||+||
T Consensus 136 p~d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~vk~~i~~qi~~aL~~L 210 (371)
T 3q60_A 136 PSDAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLD----FVYVFRGDEGILALHILTAQLIRLAANL 210 (371)
T ss_dssp CCEEEEETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHH----HSCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eehheecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhc----cccchhhhhhhhhHHHHHHHHHHHHHHH
Confidence 3433322100 000000111245799999998 89999998632 13444455 67789999999999
Q ss_pred HHCCccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCC
Q 001143 945 HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPN 1024 (1141)
Q Consensus 945 Hs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 1024 (1141)
|++||+||||||+|||++.+ +.+||+|||+|+....... ...+|+.|+|||++.+. ..
T Consensus 211 H~~~ivHrDikp~NIll~~~-------~~~kL~DFG~a~~~~~~~~-------------~~~~t~~y~aPE~~~~~--~~ 268 (371)
T 3q60_A 211 QSKGLVHGHFTPDNLFIMPD-------GRLMLGDVSALWKVGTRGP-------------ASSVPVTYAPREFLNAS--TA 268 (371)
T ss_dssp HHTTEEETTCSGGGEEECTT-------SCEEECCGGGEEETTCEEE-------------GGGSCGGGCCHHHHTCS--EE
T ss_pred HHCCCccCcCCHHHEEECCC-------CCEEEEecceeeecCCCcc-------------CccCCcCCcChhhccCC--CC
Confidence 99999999999999999987 7899999999976543210 23467999999999641 13
Q ss_pred CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHH
Q 001143 1025 LYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFL 1104 (1141)
Q Consensus 1025 ~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L 1104 (1141)
.++.++|||||||++|+|++|+.||.+....... .. ..... ..........+. ....++.+
T Consensus 269 ~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~-~~---~~~~~--------------~~~~~~~~~~~~-~~~~~~~~ 329 (371)
T 3q60_A 269 TFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKG-SW---KRPSL--------------RVPGTDSLAFGS-CTPLPDFV 329 (371)
T ss_dssp ECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTT-CC---CBCCT--------------TSCCCCSCCCTT-SSCCCHHH
T ss_pred CcCccccHHHHHHHHHHHHhCCCCCCCcCccccc-ch---hhhhh--------------hhccccccchhh-ccCCCHHH
Confidence 5789999999999999999999999765321100 00 00000 000000000110 11556789
Q ss_pred HHHHHHhcccCCCCCCCHHHHHHHHHhhc
Q 001143 1105 VDVFRRCTEENPTERPTAGDLYEMFVART 1133 (1141)
Q Consensus 1105 ~dLI~~cL~~DP~~RPSa~ElL~~L~~~~ 1133 (1141)
.+||.+||+.||++|||+.|+++|+|+..
T Consensus 330 ~~li~~~L~~dP~~Rpt~~e~l~hp~f~~ 358 (371)
T 3q60_A 330 KTLIGRFLNFDRRRRLLPLEAMETPEFLQ 358 (371)
T ss_dssp HHHHHHHTCSSTTTCCCHHHHTTSHHHHH
T ss_pred HHHHHHHcCCChhhCCCHHHHhcCHHHHH
Confidence 99999999999999999999999999974
No 241
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=343.05 Aligned_cols=256 Identities=14% Similarity=0.145 Sum_probs=191.4
Q ss_pred CCCceEeeeecccCceEEEEEE-------ECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC---CCCccce
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCK-------FGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEM 874 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~-------~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~---HpNIVkl 874 (1141)
-.+|.+.++||+|+||+||+|. ..+..+|+|+.... . ...+ .+|+.++..++ |+||+++
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~---~~~~----~~e~~~~~~l~~~~~~~iv~~ 132 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----N---PWEF----YIGTQLMERLKPSMQHMFMKF 132 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----C---HHHH----HHHHHHHHHSCGGGGGGBCCE
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----C---hhHH----HHHHHHHHHhhhhhhhhhhhh
Confidence 4569999999999999999994 25678888885421 1 1223 67888888886 9999999
Q ss_pred eeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 001143 875 YGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDI 954 (1141)
Q Consensus 875 lg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDL 954 (1141)
++++...+. .++||||+++|+|.+++..........+++..++.|+.||+.||+|||++||+||||
T Consensus 133 ~~~~~~~~~--------------~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDi 198 (365)
T 3e7e_A 133 YSAHLFQNG--------------SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDI 198 (365)
T ss_dssp EEEEECSSC--------------EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCC
T ss_pred heeeecCCC--------------cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCC
Confidence 999987553 499999999999999998755444567999999999999999999999999999999
Q ss_pred CCCCeeeecccc----cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchh
Q 001143 955 KSENILIDLERK----KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEV 1030 (1141)
Q Consensus 955 KP~NILld~~~~----~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ks 1030 (1141)
||+|||++.... .....+.+||+|||+|+.+....... ......||+.|+|||++.+ ..++.++
T Consensus 199 Kp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~----~~~~~~~ 266 (365)
T 3e7e_A 199 KPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGT--------IFTAKCETSGFQCVEMLSN----KPWNYQI 266 (365)
T ss_dssp SGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCTTE--------EECCSSCTTSCCCHHHHTT----CCBSTHH
T ss_pred CHHHEEecccccCccccccccCCEEEeeCchhhhhhccCCCc--------eeeeecCCCCCCChHHhcC----CCCCccc
Confidence 999999987100 00112789999999997654221110 1123469999999999986 5688999
Q ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHH
Q 001143 1031 DIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRR 1110 (1141)
Q Consensus 1031 DVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~ 1110 (1141)
|||||||++|||++|+.||........ ........ ....+.+.+++..
T Consensus 267 DiwslG~il~elltg~~pf~~~~~~~~-------------------------~~~~~~~~-------~~~~~~~~~~~~~ 314 (365)
T 3e7e_A 267 DYFGVAATVYCMLFGTYMKVKNEGGEC-------------------------KPEGLFRR-------LPHLDMWNEFFHV 314 (365)
T ss_dssp HHHHHHHHHHHHHHSSCCCEEEETTEE-------------------------EECSCCTT-------CSSHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCccccCCCCce-------------------------eechhccc-------cCcHHHHHHHHHH
Confidence 999999999999999999864211000 00000000 0235568899999
Q ss_pred hcccCCCCCC-CHHHHHHHH
Q 001143 1111 CTEENPTERP-TAGDLYEMF 1129 (1141)
Q Consensus 1111 cL~~DP~~RP-Sa~ElL~~L 1129 (1141)
||+.+|.+|+ ++.++.+.+
T Consensus 315 ~l~~~p~~r~~~~~~l~~~l 334 (365)
T 3e7e_A 315 MLNIPDCHHLPSLDLLRQKL 334 (365)
T ss_dssp HHCCCCTTCCCCHHHHHHHH
T ss_pred HcCCCCCCcchHHHHHHHHH
Confidence 9999999994 566555443
No 242
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=352.06 Aligned_cols=262 Identities=22% Similarity=0.305 Sum_probs=190.6
Q ss_pred CceEeeeecccCceE-EEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCC
Q 001143 807 SLSSCDEAGKSVSSS-LFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWL 884 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~-Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~ 884 (1141)
+|.+.++||+|+||+ ||++.+.+..||||+..... ...+ .+|+.+++++ +|||||++++++.+..
T Consensus 25 ~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~-------~~~~----~~E~~~l~~l~~HpnIv~l~~~~~~~~-- 91 (432)
T 3p23_A 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC-------FSFA----DREVQLLRESDEHPNVIRYFCTEKDRQ-- 91 (432)
T ss_dssp EEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT-------EEEC----HHHHHHHHHSCCCTTBCCEEEEEEETT--
T ss_pred EEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH-------HHHH----HHHHHHHHhccCCCCcCeEEEEEecCC--
Confidence 589999999999998 55556678889999753211 1122 6899999999 7999999999988655
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecc
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLE 964 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~ 964 (1141)
..|+||||++ |+|.+++... ...+++..+..|+.||+.||.|||++||+||||||+|||++.+
T Consensus 92 ------------~~~lv~E~~~-g~L~~~l~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~ 154 (432)
T 3p23_A 92 ------------FQYIAIELCA-ATLQEYVEQK----DFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP 154 (432)
T ss_dssp ------------EEEEEEECCS-EEHHHHHHSS----SCCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCC
T ss_pred ------------EEEEEEECCC-CCHHHHHHhc----CCCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecC
Confidence 3499999997 6999999751 2245556678999999999999999999999999999999643
Q ss_pred cccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHh
Q 001143 965 RKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLT 1044 (1141)
Q Consensus 965 ~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLT 1044 (1141)
+ ..+...+||+|||+|+........ ........||+.|+|||++.+.. ...++.++|||||||++|||++
T Consensus 155 ~--~~~~~~~kL~DFG~a~~~~~~~~~-------~~~~~~~~gt~~y~APE~l~~~~-~~~~t~~~DiwSlG~il~ellt 224 (432)
T 3p23_A 155 N--AHGKIKAMISDFGLCKKLAVGRHS-------FSRRSGVPGTEGWIAPEMLSEDC-KENPTYTVDIFSAGCVFYYVIS 224 (432)
T ss_dssp B--TTTBCCEEECCTTEEECC-------------------CCSCTTSCCGGGTSCC----CCCTHHHHHHHHHHHHHHHT
T ss_pred C--CCCceeEEEecccceeeccCCCcc-------eeeccccCCCcCccChhhhhccc-ccCCCcHHHHHHHHHHHHHHHc
Confidence 1 122357899999999765432111 01122456999999999987421 2456789999999999999999
Q ss_pred -CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHH
Q 001143 1045 -LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAG 1123 (1141)
Q Consensus 1045 -Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ 1123 (1141)
|..||......+....+........ ......+..+.+||.+||+.||.+|||+.
T Consensus 225 ~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~li~~~L~~dP~~Rps~~ 279 (432)
T 3p23_A 225 EGSHPFGKSLQRQANILLGACSLDCL-------------------------HPEKHEDVIARELIEKMIAMDPQKRPSAK 279 (432)
T ss_dssp TSCBTTBSTTTHHHHHHTTCCCCTTS-------------------------CTTCHHHHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCCCCcchhhHHHHHHHhccCCcccc-------------------------CccccccHHHHHHHHHHHhCCHhhCCCHH
Confidence 9999975443332222111110000 00114566689999999999999999999
Q ss_pred HHHHHHHhhc
Q 001143 1124 DLYEMFVART 1133 (1141)
Q Consensus 1124 ElL~~L~~~~ 1133 (1141)
|+++|+||..
T Consensus 280 evl~hp~f~~ 289 (432)
T 3p23_A 280 HVLKHPFFWS 289 (432)
T ss_dssp HHHTSTTTCC
T ss_pred HHHhCccccC
Confidence 9999999853
No 243
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=2.2e-34 Score=346.00 Aligned_cols=261 Identities=19% Similarity=0.218 Sum_probs=195.9
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCC-CccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS-CIVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp-NIVkllg~~~~~ 881 (1141)
.++|++.++||+|+||.||+|.+. +..||+|+....... .. +.+|+.+++.++|+ +|+.+..++...
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~------~~----~~~E~~il~~L~~~~~i~~i~~~~~~~ 75 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH------PQ----LLYESKIYRILQGGTGIPNVRWFGVEG 75 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS------CC----HHHHHHHHHHTTTSTTCCCEEEEEEET
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc------HH----HHHHHHHHHHhcCCCCCCeEEEEEeeC
Confidence 467999999999999999999984 677888876543211 12 36899999999864 555554444433
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeee
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILI 961 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILl 961 (1141)
. ..+|||||+ +++|.+++... ...+++..++.|+.||+.||.|||++||+||||||+||||
T Consensus 76 ~--------------~~~lvme~~-g~sL~~ll~~~----~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl 136 (483)
T 3sv0_A 76 D--------------YNVLVMDLL-GPSLEDLFNFC----SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLM 136 (483)
T ss_dssp T--------------EEEEEEECC-CCBHHHHHHHT----TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE
T ss_pred C--------------EEEEEEECC-CCCHHHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEE
Confidence 3 459999999 89999999752 3469999999999999999999999999999999999999
Q ss_pred e---cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 962 D---LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 962 d---~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
+ .+ +.+||+|||+++.+....... ...........||+.|+|||++.+ ..++.++|||||||+
T Consensus 137 ~~~~~~-------~~vkL~DFGla~~~~~~~~~~---~~~~~~~~~~~gt~~Y~aPE~~~~----~~~s~~sDvwSlGvi 202 (483)
T 3sv0_A 137 GLGRRA-------NQVYIIDFGLAKKYRDTSTHQ---HIPYRENKNLTGTARYASVNTHLG----IEQSRRDDLESLGYV 202 (483)
T ss_dssp CCGGGT-------TCEEECCCTTCEECBCTTTCC---BCCCCCCCCCCSCTTTCCHHHHTT----CCCCHHHHHHHHHHH
T ss_pred ecCCCC-------CeEEEEeCCcceeccCCcccc---ccccccccccCCCccccCHHHhcC----CCCChHHHHHHHHHH
Confidence 4 44 789999999998765432111 001112235679999999999986 568899999999999
Q ss_pred HHHHHhCCCCCCCCCH---HHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccC
Q 001143 1039 LLELLTLQVPYMGLSE---LEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEEN 1115 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~---~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~D 1115 (1141)
+|||++|+.||.+... .+.+..+.......... .....++.++.+|+..||+.|
T Consensus 203 l~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~-----------------------~l~~~~p~~l~~li~~cl~~d 259 (483)
T 3sv0_A 203 LMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIE-----------------------ALCRGYPTEFASYFHYCRSLR 259 (483)
T ss_dssp HHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHH-----------------------HHHTTSCHHHHHHHHHHHTCC
T ss_pred HHHHHhCCCCCccccchhHHHHHHHHhhccccccHH-----------------------HHhcCCcHHHHHHHHHHhcCC
Confidence 9999999999986433 23333322111000000 011145678999999999999
Q ss_pred CCCCCCHHHHHHHHHh
Q 001143 1116 PTERPTAGDLYEMFVA 1131 (1141)
Q Consensus 1116 P~~RPSa~ElL~~L~~ 1131 (1141)
|++||++.+|++.+..
T Consensus 260 P~~RPs~~el~~~L~~ 275 (483)
T 3sv0_A 260 FDDKPDYSYLKRLFRD 275 (483)
T ss_dssp TTCCCCHHHHHHHHHH
T ss_pred hhhCcCHHHHHHHHHH
Confidence 9999999999887654
No 244
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=5.1e-35 Score=347.00 Aligned_cols=270 Identities=21% Similarity=0.280 Sum_probs=188.0
Q ss_pred ceEeeeecccCceEEEEE-EECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCCCC
Q 001143 808 LSSCDEAGKSVSSSLFRC-KFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKWLP 885 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a-~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~~~ 885 (1141)
|.+.++||+|+||+||.+ ...+..||+|+...+. .+ .+.+|+.+++++ +|||||++++++.+..
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~-------~~----~~~~E~~~l~~l~~HpnIv~~~~~~~~~~--- 82 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF-------CD----IALMEIKLLTESDDHPNVIRYYCSETTDR--- 82 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG-------HH----HHHHHHHHHHHHTTSTTBCCEEEEEECSS---
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH-------HH----HHHHHHHHHHhccCCCCcCeEEEEEecCC---
Confidence 567889999999999755 4467889999764321 12 236899999876 8999999999987654
Q ss_pred CCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 886 SADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGE--KHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 886 ~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~--~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..++||||++ |+|.+++........ ...++..++.|+.||+.||+|||++||+||||||+|||++.
T Consensus 83 -----------~~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~ 150 (434)
T 2rio_A 83 -----------FLYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVST 150 (434)
T ss_dssp -----------EEEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEC
T ss_pred -----------eEEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEec
Confidence 3599999996 699999975211110 01133456789999999999999999999999999999976
Q ss_pred ccc------cCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc---CCCCCCchhhHHH
Q 001143 964 ERK------KADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH---KPNLYGLEVDIWS 1034 (1141)
Q Consensus 964 ~~~------~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~~s~ksDVWS 1034 (1141)
++. .....+.+||+|||+++......... ........||+.|+|||++.+.. ....++.++||||
T Consensus 151 ~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwS 224 (434)
T 2rio_A 151 SSRFTADQQTGAENLRILISDFGLCKKLDSGQSSF------RTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFS 224 (434)
T ss_dssp CHHHHSCCTTCCCSCEEEECCCTTCEECCC--------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHH
T ss_pred CcccccccccCCCceEEEEcccccceecCCCCccc------eeeecCCCCCCCccCHHHhccccccccccCcchhhhhHh
Confidence 420 01123689999999998764422110 00112346999999999997521 1246789999999
Q ss_pred HHHHHHHHHh-CCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcc
Q 001143 1035 YGCLLLELLT-LQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTE 1113 (1141)
Q Consensus 1035 LGviL~ELLT-Gk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~ 1113 (1141)
|||++|||++ |+.||......+ ..+..+.... .. . ........+.++.++|.+||+
T Consensus 225 lG~il~ellt~g~~Pf~~~~~~~--~~i~~~~~~~-~~-------------------~-~~~~~~~~~~~~~~li~~~L~ 281 (434)
T 2rio_A 225 MGCVFYYILSKGKHPFGDKYSRE--SNIIRGIFSL-DE-------------------M-KCLHDRSLIAEATDLISQMID 281 (434)
T ss_dssp HHHHHHHHHTTSCCTTCSTTTHH--HHHHHTCCCC-CC-------------------C-TTCCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCCCCCCCCchhhH--HHHhcCCCCc-cc-------------------c-cccccccchHHHHHHHHHHhh
Confidence 9999999999 999997644332 1222211110 00 0 000012567789999999999
Q ss_pred cCCCCCCCHHHHHHHHHhh
Q 001143 1114 ENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1114 ~DP~~RPSa~ElL~~L~~~ 1132 (1141)
.||.+|||+.++++|+|+.
T Consensus 282 ~dP~~Rps~~eil~hp~f~ 300 (434)
T 2rio_A 282 HDPLKRPTAMKVLRHPLFW 300 (434)
T ss_dssp SSGGGSCCHHHHHTSGGGS
T ss_pred CChhhCCCHHHHHhCCccC
Confidence 9999999999999999985
No 245
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=3.5e-34 Score=321.71 Aligned_cols=245 Identities=22% Similarity=0.251 Sum_probs=181.6
Q ss_pred CCCceEe-eeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHH-hhCCCCCccceeeeEec
Q 001143 805 FPSLSSC-DEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRML-GALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 805 ~~~y~i~-~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL-~~L~HpNIVkllg~~~~ 880 (1141)
+.+|.+. +.||+|+||.||+|.+. +..+|+|+.... .. +.+|+.++ +.++||||+++++++..
T Consensus 16 ~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---------~~----~~~e~~~~~~~~~h~~i~~~~~~~~~ 82 (299)
T 3m2w_A 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC---------PK----ARREVELHWRASQCPHIVRIVDVYEN 82 (299)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS---------HH----HHHHHHHHHHHTTSTTBCCEEEEEEE
T ss_pred ccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc---------HH----HHHHHHHHHHhccCCCchhHHhhhhh
Confidence 5678887 78999999999999984 567888875311 11 25788888 55589999999999875
Q ss_pred CCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCee
Q 001143 881 SKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENIL 960 (1141)
Q Consensus 881 ~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NIL 960 (1141)
.. ......++||||+++++|.+++.. .....+++..++.|+.||+.||.|||++||+||||||+|||
T Consensus 83 ~~----------~~~~~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil 149 (299)
T 3m2w_A 83 LY----------AGRKCLLIVMECLDGGELFSRIQD---RGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL 149 (299)
T ss_dssp EE----------TTEEEEEEEECCCCSCBHHHHHHH---CTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEE
T ss_pred hc----------CCCceEEEEEeecCCCcHHHHHHh---ccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence 11 012256999999999999999986 33346999999999999999999999999999999999999
Q ss_pred eecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHH
Q 001143 961 IDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLL 1040 (1141)
Q Consensus 961 ld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ 1040 (1141)
++.+. ..+.+||+|||++..... ..++.++|||||||++|
T Consensus 150 ~~~~~----~~~~~kl~Dfg~a~~~~~------------------------------------~~~~~~~DiwslG~il~ 189 (299)
T 3m2w_A 150 YTSKR----PNAILKLTDFGFAKETTG------------------------------------EKYDKSCDMWSLGVIMY 189 (299)
T ss_dssp ESSSS----TTCCEEECCCTTCEECTT------------------------------------CGGGGHHHHHHHHHHHH
T ss_pred EecCC----CCCcEEEecccccccccc------------------------------------ccCCchhhHHHHHHHHH
Confidence 98731 127899999998853211 23458999999999999
Q ss_pred HHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCc-hhhhhhHHHHHHHHHHhcccCCCCC
Q 001143 1041 ELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKP-EAELETLSFLVDVFRRCTEENPTER 1119 (1141)
Q Consensus 1041 ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~L~dLI~~cL~~DP~~R 1119 (1141)
+|++|+.||.+....+....+... .. . .....+ ......++++.+++.+||+.||.+|
T Consensus 190 el~tg~~pf~~~~~~~~~~~~~~~----~~---------------~--~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R 248 (299)
T 3m2w_A 190 ILLCGYPPFYSNHGLAISPGMKTR----IR---------------M--GQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQR 248 (299)
T ss_dssp HHHHSSCSCCC-------CCSCCS----SC---------------T--TCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTS
T ss_pred HHHHCCCCCCCCcchhhhHHHHHH----Hh---------------h--ccccCCchhcccCCHHHHHHHHHHcccChhhC
Confidence 999999999764432221110000 00 0 000011 1112567789999999999999999
Q ss_pred CCHHHHHHHHHhhcCCC
Q 001143 1120 PTAGDLYEMFVARTSSS 1136 (1141)
Q Consensus 1120 PSa~ElL~~L~~~~~s~ 1136 (1141)
||+.|+++|+|+.....
T Consensus 249 ps~~e~l~hp~~~~~~~ 265 (299)
T 3m2w_A 249 MTITEFMNHPWIMQSTK 265 (299)
T ss_dssp CCHHHHHTSHHHHTGGG
T ss_pred CCHHHHhcChhhccccc
Confidence 99999999999976543
No 246
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=3.1e-35 Score=335.87 Aligned_cols=274 Identities=17% Similarity=0.102 Sum_probs=186.2
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC---------CCCcccee
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---------HSCIVEMY 875 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~---------HpNIVkll 875 (1141)
..+|++.++||+|+||+||+|++.+..||+|+...................+.+|+.+++.++ |||||+++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 457999999999999999999999999999987654321100000011122368888888775 66666665
Q ss_pred eeE-----------------ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHH
Q 001143 876 GHK-----------------ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVA 938 (1141)
Q Consensus 876 g~~-----------------~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa 938 (1141)
+.+ .+.... ..+........+.|+||||+++|++.+.+.+ ..+++..++.|+.||+
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~-~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~------~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGS-ANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT------KLSSLATAKSILHQLT 171 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCC-SSCCSCCCCTTCEEEEEEEECCCEETGGGTT------TCCCHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccc-cccCccccccCeEEEEEEecCCCccHHHHHh------cCCCHHHHHHHHHHHH
Confidence 553 321000 0000000012357999999999976655532 3689999999999999
Q ss_pred HHHHHHH-HCCccccCCCCCCeeeeccccc-------------CCCCCeEEEeeccccccccccccccccccCCCCCCCC
Q 001143 939 AALVELH-SKHIMHRDIKSENILIDLERKK-------------ADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDV 1004 (1141)
Q Consensus 939 ~gL~yLH-s~gIvHrDLKP~NILld~~~~~-------------~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~ 1004 (1141)
.||+||| ++||+||||||+|||++.++.. ......+||+|||+|+..... .
T Consensus 172 ~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---------------~ 236 (336)
T 2vuw_A 172 ASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---------------I 236 (336)
T ss_dssp HHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---------------E
T ss_pred HHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---------------c
Confidence 9999999 9999999999999999876200 000128999999999765421 3
Q ss_pred ccCCCcccchhhhccccCCCCCCchhhHHHHHHH-HHHHHhCCCCCCCCCH-HHHHHHHHhC-CCCCchhHHhhhccCcc
Q 001143 1005 CVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL-LLELLTLQVPYMGLSE-LEIHDLIQMG-KRPRLTDELEALGSCHE 1081 (1141)
Q Consensus 1005 ~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi-L~ELLTGk~Pf~~~~~-~el~~~I~~~-~~p~l~~~l~~~~~~~~ 1081 (1141)
..||+.|+|||++.+ .. +.++||||+|++ .+++++|..||.+... ......+... ....
T Consensus 237 ~~gt~~y~aPE~~~g----~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~------------- 298 (336)
T 2vuw_A 237 VVFCDVSMDEDLFTG----DG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKT------------- 298 (336)
T ss_dssp EECCCCTTCSGGGCC----CS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSS-------------
T ss_pred EEEeecccChhhhcC----CC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCc-------------
Confidence 469999999999986 22 789999998777 7778889998853111 1122222211 1100
Q ss_pred ccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCHHHHH-HHHHhh
Q 001143 1082 HEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTAGDLY-EMFVAR 1132 (1141)
Q Consensus 1082 ~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa~ElL-~~L~~~ 1132 (1141)
..........++++.+||.+||+.| |++|++ +|+|++
T Consensus 299 ---------~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 299 ---------KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp ---------CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred ---------ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 0011122367889999999999976 999999 999984
No 247
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.5e-34 Score=338.92 Aligned_cols=269 Identities=14% Similarity=0.117 Sum_probs=188.0
Q ss_pred CCCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC-CCcccee------
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH-SCIVEMY------ 875 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H-pNIVkll------ 875 (1141)
...|.+.++||+|+||+||+|.+. +..||||+...... ......+. +.+|+.+++.++| +|.....
T Consensus 77 ~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~-~~~~~~~~----~~~E~~~~~~l~~~~~~~~~~~~~~~~ 151 (413)
T 3dzo_A 77 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTER-PPSNAIKQ----MKEEVLRLRLLRGIKNQKQAKVHLRFI 151 (413)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC-----CCHH----HHHHHHGGGGSTTCCSHHHHHHHTCBC
T ss_pred ceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCC-ccHHHHHH----HHHHHHHHHhhccCCCHHHHHHhcccc
Confidence 345889999999999999999985 77899998653221 11112233 4799999999976 3322211
Q ss_pred ---eeEecCCCC---CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhh--cCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 001143 876 ---GHKISSKWL---PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSE--TGEKHVSVKLALFIAQDVAAALVELHSK 947 (1141)
Q Consensus 876 ---g~~~~~~~~---~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~--~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~ 947 (1141)
+.....+.. ....+.........+++|+++ +++|.++++.... .....+++..++.|+.||+.||+|||++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 230 (413)
T 3dzo_A 152 FPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY 230 (413)
T ss_dssp CCCEEEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cchhhcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 111111000 000000111234568888877 5899999864321 2244688899999999999999999999
Q ss_pred CccccCCCCCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcccc------
Q 001143 948 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMH------ 1021 (1141)
Q Consensus 948 gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------ 1021 (1141)
||+||||||+|||++.+ +.+||+|||+++...... ....| +.|+|||++.+..
T Consensus 231 ~iiHrDiKp~NILl~~~-------~~~kL~DFG~a~~~~~~~-------------~~~~g-~~y~aPE~~~~~~~~~~~~ 289 (413)
T 3dzo_A 231 GLVHTYLRPVDIVLDQR-------GGVFLTGFEHLVRDGASA-------------VSPIG-RGFAPPETTAERMLPFGQH 289 (413)
T ss_dssp TEECSCCCGGGEEECTT-------CCEEECCGGGCEETTEEE-------------CCCCC-TTTCCHHHHHHHTSTTGGG
T ss_pred CcccCCcccceEEEecC-------CeEEEEeccceeecCCcc-------------ccCCC-CceeCchhhhccccccccc
Confidence 99999999999999988 789999999987654321 13357 9999999994321
Q ss_pred CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhH
Q 001143 1022 KPNLYGLEVDIWSYGCLLLELLTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETL 1101 (1141)
Q Consensus 1022 ~~~~~s~ksDVWSLGviL~ELLTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1101 (1141)
....++.++|||||||++|||++|+.||......+....+. ... ...+
T Consensus 290 ~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~-----------------------~~~---------~~~~ 337 (413)
T 3dzo_A 290 HPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIF-----------------------RSC---------KNIP 337 (413)
T ss_dssp CCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGG-----------------------SSC---------CCCC
T ss_pred cCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHH-----------------------hhc---------ccCC
Confidence 23457889999999999999999999997643221111100 000 0345
Q ss_pred HHHHHHHHHhcccCCCCCCCHHHHHHHHHhh
Q 001143 1102 SFLVDVFRRCTEENPTERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1102 ~~L~dLI~~cL~~DP~~RPSa~ElL~~L~~~ 1132 (1141)
+.+.+||.+||+.||.+||++.++++|+|+.
T Consensus 338 ~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~ 368 (413)
T 3dzo_A 338 QPVRALLEGFLRYPKEDRLLPLQAMETPEYE 368 (413)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTTSHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHHhCHHHH
Confidence 6799999999999999999999999999985
No 248
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=1.6e-34 Score=356.33 Aligned_cols=290 Identities=19% Similarity=0.181 Sum_probs=198.6
Q ss_pred CCCCCCCceEeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeE
Q 001143 801 DPGSFPSLSSCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHK 878 (1141)
Q Consensus 801 ~~~~~~~y~i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~ 878 (1141)
+...+.+|++.++||+|+||+||+|.+ .+..||+|+.... ......+. +.+|+.++++++||||+++++++
T Consensus 9 pg~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~---~~~~~~~~----~~~Ei~iL~~L~HpnIV~l~~v~ 81 (676)
T 3qa8_A 9 PTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE---LSPKNRER----WCLEIQIMKKLNHPNVVSAREVP 81 (676)
T ss_dssp --------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC---CCHHHHHH----HHHHHHHHHHCCBTTBCCEEECC
T ss_pred CCCCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc---CCHHHHHH----HHHHHHHHHhCCCCCCCceeeee
Confidence 344568899999999999999999997 4567888864321 22333333 48999999999999999999987
Q ss_pred ecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCC
Q 001143 879 ISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSEN 958 (1141)
Q Consensus 879 ~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~N 958 (1141)
...... ......++||||++|++|.+++... .....+++..++.|+.||+.||.|||++||+||||||+|
T Consensus 82 ~~~~~~--------~~~~~~~LVmEy~~ggsL~~~L~~~--~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~N 151 (676)
T 3qa8_A 82 DGLQKL--------APNDLPLLAMEYCEGGDLRKYLNQF--ENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPEN 151 (676)
T ss_dssp TTTCCC--------CTTSSCCCEEECCSSCBHHHHHHSS--SCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTT
T ss_pred cccccc--------cCCCeEEEEEEeCCCCCHHHHHHhc--ccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHH
Confidence 652211 1122458999999999999999762 222358999999999999999999999999999999999
Q ss_pred eeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHH
Q 001143 959 ILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCL 1038 (1141)
Q Consensus 959 ILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGvi 1038 (1141)
|+++.++ ....+||+|||.+....... ......||+.|+|||++.+ ..++.++|||||||+
T Consensus 152 ILl~~~g----~~~~vKL~DFG~a~~~~~~~-----------~~~~~~gt~~Y~APE~l~~----~~~s~ksDIwSLGvi 212 (676)
T 3qa8_A 152 IVLQPGP----QRLIHKIIDLGYAKELDQGE-----------LCTEFVGTLQYLAPELLEQ----KKYTVTVDYWSFGTL 212 (676)
T ss_dssp EEEECCS----SSCEEEECSCCCCCBTTSCC-----------CCCCCCSCCTTCSSCSSCC----SCCSTTHHHHHHHHH
T ss_pred eEeecCC----CceeEEEccccccccccccc-----------ccccccCCcccCChHHhcc----CCCCchhHHHHHHHH
Confidence 9998652 12469999999997654321 1123468999999999875 568899999999999
Q ss_pred HHHHHhCCCCCCCCCHHHHH-HHHHhCCCCCchhHHhhhccCccccccccCCCCC-CchhhhhhHHHHHHHHHHhcccCC
Q 001143 1039 LLELLTLQVPYMGLSELEIH-DLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFE-KPEAELETLSFLVDVFRRCTEENP 1116 (1141)
Q Consensus 1039 L~ELLTGk~Pf~~~~~~el~-~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~dLI~~cL~~DP 1116 (1141)
+|+|++|..||......... ..+........ ................. ........++.+.+++.+||.+||
T Consensus 213 LyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~------~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP 286 (676)
T 3qa8_A 213 AFECITGFRPFLPNWQPVQWHGKVREKSNEHI------VVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQ 286 (676)
T ss_dssp HHHHHSSCSSCCSSCHHHHSSTTCC------C------CSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSC
T ss_pred HHHHHHCCCCCCcccchhhhhhhhhcccchhh------hhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCH
Confidence 99999999999764332111 00000000000 00000000000000000 111223578899999999999999
Q ss_pred CCCCCHHHHHHHHHhh
Q 001143 1117 TERPTAGDLYEMFVAR 1132 (1141)
Q Consensus 1117 ~~RPSa~ElL~~L~~~ 1132 (1141)
++|||+.|+++|+||.
T Consensus 287 ~kRPTa~elL~hp~F~ 302 (676)
T 3qa8_A 287 RQRGTDPQNPNVGCFQ 302 (676)
T ss_dssp C---CCTTCCCCTTHH
T ss_pred hhCcCHHHHhcCHHHH
Confidence 9999999999999985
No 249
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=6.5e-33 Score=310.75 Aligned_cols=230 Identities=14% Similarity=0.079 Sum_probs=176.5
Q ss_pred CCceEeeeecccCceEEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~ 883 (1141)
.+|++.+.||+|+||.||+|++. +..||+|+..... .......+. +.+|+.++.+++||||+++++++.+.+
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~-~~~~~~~~~----~~~e~~~l~~l~hp~iv~~~~~~~~~~- 104 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQG-VLPDDVLQE----TLSRTLRLSRIDKPGVARVLDVVHTRA- 104 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTC-CSCHHHHHH----HHHHHHHHHTCCCTTBCCEEEEEEETT-
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECccc-ccCHHHHHH----HHHHHHHHhcCCCCCcceeeEEEEECC-
Confidence 56999999999999999999996 5677787754221 111222333 489999999999999999999998755
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
..|+||||++|++|.++++. .....++.+|+.||+.||+|||++||+||||||+|||++.
T Consensus 105 -------------~~~lv~e~~~g~~L~~~l~~-------~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~ 164 (286)
T 3uqc_A 105 -------------GGLVVAEWIRGGSLQEVADT-------SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI 164 (286)
T ss_dssp -------------EEEEEEECCCEEEHHHHHTT-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEET
T ss_pred -------------cEEEEEEecCCCCHHHHHhc-------CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcC
Confidence 34999999999999999853 2456678999999999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+++| |++ .++.++|||||||++|+|+
T Consensus 165 ~-------g~~kl~~~~------------------------------~~~-----------~~~~~~Di~slG~il~ell 196 (286)
T 3uqc_A 165 D-------GDVVLAYPA------------------------------TMP-----------DANPQDDIRGIGASLYALL 196 (286)
T ss_dssp T-------SCEEECSCC------------------------------CCT-----------TCCHHHHHHHHHHHHHHHH
T ss_pred C-------CCEEEEecc------------------------------ccC-----------CCCchhHHHHHHHHHHHHH
Confidence 7 788887544 222 2458999999999999999
Q ss_pred hCCCCCCCCCHHHHHH---HHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCC
Q 001143 1044 TLQVPYMGLSELEIHD---LIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERP 1120 (1141)
Q Consensus 1044 TGk~Pf~~~~~~el~~---~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RP 1120 (1141)
+|+.||.+.+..+... .......+. ........++.+.+++.+||+.||.+|
T Consensus 197 tg~~Pf~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~l~~li~~~l~~dP~~R- 251 (286)
T 3uqc_A 197 VNRWPLPEAGVRSGLAPAERDTAGQPIE------------------------PADIDRDIPFQISAVAARSVQGDGGIR- 251 (286)
T ss_dssp HSEECSCCCSBCCCSEECCBCTTSCBCC------------------------HHHHCTTSCHHHHHHHHHHHCTTSSCC-
T ss_pred HCCCCCCcCCcchhhHHHHHHhccCCCC------------------------hhhcccCCCHHHHHHHHHHcccCCccC-
Confidence 9999998644321110 000000000 001112566789999999999999999
Q ss_pred CHHHHHHHHHhhcC
Q 001143 1121 TAGDLYEMFVARTS 1134 (1141)
Q Consensus 1121 Sa~ElL~~L~~~~~ 1134 (1141)
|+.|+++.+.....
T Consensus 252 s~~el~~~L~~~~~ 265 (286)
T 3uqc_A 252 SASTLLNLMQQATA 265 (286)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHhc
Confidence 99999999887543
No 250
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.2e-32 Score=344.63 Aligned_cols=242 Identities=22% Similarity=0.247 Sum_probs=186.6
Q ss_pred CCceEeeeecccCceEEEEEEEC---CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCC
Q 001143 806 PSLSSCDEAGKSVSSSLFRCKFG---SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSK 882 (1141)
Q Consensus 806 ~~y~i~~~LG~GsfG~Vy~a~~~---~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~ 882 (1141)
.+|++.++||+|+||.||+|.+. +..|++|+.. .. ....... .+.+|+.++++++|||||++++++...+
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~--~~-~~~~~~~----~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 152 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLV--HS-GDAEAQA----MAMAERQFLAEVVHPSIVQIFNFVEHTD 152 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESC--SS-CCHHHHH----HHHHHHGGGGGCCCTTBCCEEEEEEEEC
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeC--cc-CCHHHHH----HHHHHHHHHHhcCCCCcCeEeeeEeecC
Confidence 67999999999999999999984 5667777642 21 1222223 3479999999999999999999998654
Q ss_pred CCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeee
Q 001143 883 WLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILID 962 (1141)
Q Consensus 883 ~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld 962 (1141)
.. .....||||||++|++|.+++.. .+++.+++.|+.||+.||.|||++||+||||||+|||++
T Consensus 153 ~~---------~~~~~~lv~E~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~ 216 (681)
T 2pzi_A 153 RH---------GDPVGYIVMEYVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216 (681)
T ss_dssp TT---------SCEEEEEEEECCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC
T ss_pred CC---------CCceeEEEEEeCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEe
Confidence 21 12235999999999999887643 699999999999999999999999999999999999997
Q ss_pred cccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHH
Q 001143 963 LERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLEL 1042 (1141)
Q Consensus 963 ~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~EL 1042 (1141)
.+ .+||+|||+++..... ....||+.|+|||++.+ .++.++|||||||++|+|
T Consensus 217 ~~--------~~kl~DFG~a~~~~~~--------------~~~~gt~~y~aPE~~~~-----~~~~~sDi~slG~~l~~l 269 (681)
T 2pzi_A 217 EE--------QLKLIDLGAVSRINSF--------------GYLYGTPGFQAPEIVRT-----GPTVATDIYTVGRTLAAL 269 (681)
T ss_dssp SS--------CEEECCCTTCEETTCC--------------SCCCCCTTTSCTTHHHH-----CSCHHHHHHHHHHHHHHH
T ss_pred CC--------cEEEEecccchhcccC--------------CccCCCccccCHHHHcC-----CCCCceehhhhHHHHHHH
Confidence 63 6999999999765331 23469999999999876 237899999999999999
Q ss_pred HhCCCCCCCCCHHHHHHHHHhCCCCCchhHHhhhccCccccccccCCCCCCchhhhhhHHHHHHHHHHhcccCCCCCCCH
Q 001143 1043 LTLQVPYMGLSELEIHDLIQMGKRPRLTDELEALGSCHEHEVAQSGSGFEKPEAELETLSFLVDVFRRCTEENPTERPTA 1122 (1141)
Q Consensus 1043 LTGk~Pf~~~~~~el~~~I~~~~~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~dLI~~cL~~DP~~RPSa 1122 (1141)
++|..||.+.... ..+. .......++.+.++|.+||+.||.+||+.
T Consensus 270 ~~g~~~~~~~~~~---------~~~~-------------------------~~~~~~~~~~l~~li~~~l~~dP~~R~~~ 315 (681)
T 2pzi_A 270 TLDLPTRNGRYVD---------GLPE-------------------------DDPVLKTYDSYGRLLRRAIDPDPRQRFTT 315 (681)
T ss_dssp HSCCCEETTEECS---------SCCT-------------------------TCHHHHHCHHHHHHHHHHTCSSGGGSCSS
T ss_pred HhCCCCCcccccc---------cccc-------------------------cccccccCHHHHHHHhhhccCChhhCCCH
Confidence 9999888642100 0000 00111344678999999999999999987
Q ss_pred HHHHHHHHh
Q 001143 1123 GDLYEMFVA 1131 (1141)
Q Consensus 1123 ~ElL~~L~~ 1131 (1141)
.+.+.+.|+
T Consensus 316 ~~~l~~~l~ 324 (681)
T 2pzi_A 316 AEEMSAQLT 324 (681)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777766654
No 251
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.98 E-value=8e-32 Score=341.63 Aligned_cols=296 Identities=21% Similarity=0.193 Sum_probs=244.6
Q ss_pred CcccccCCCCCccccCCCCCCC--CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcCCc
Q 001143 18 IKEKLPSEANKINNEKNGSVND--DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLR 94 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~--l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~L~ 94 (1141)
.++.|.+..|++++..+..+.. +++|++|+|++|++++.+|..++.+ ++|++|+|++|+++ .+|..|.++++|+
T Consensus 369 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l---~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 445 (768)
T 3rgz_A 369 SLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNC---SELVSLHLSFNYLSGTIPSSLGSLSKLR 445 (768)
T ss_dssp TCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGC---TTCCEEECCSSEEESCCCGGGGGCTTCC
T ss_pred CCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcC---CCCCEEECcCCcccCcccHHHhcCCCCC
Confidence 4556666666666555555554 6677788888887777777766555 78888888888887 6677888888888
Q ss_pred EEEccCCCCC-cCchhhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEcc
Q 001143 95 NLKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC 172 (1141)
Q Consensus 95 ~L~Ls~N~L~-~lP~~~~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls 172 (1141)
.|+|++|+++ .+|..+..+++|+.|+|++|.+. .+|..+.++++|++|+|++|.+ .+.+|..++.+++|+.|+++
T Consensus 446 ~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l---~~~~p~~~~~l~~L~~L~L~ 522 (768)
T 3rgz_A 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRL---TGEIPKWIGRLENLAILKLS 522 (768)
T ss_dssp EEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC---CSCCCGGGGGCTTCCEEECC
T ss_pred EEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCcc---CCcCChHHhcCCCCCEEECC
Confidence 8888888887 67888888888888888888855 6777888888888888888544 45667788888888888888
Q ss_pred CCCCC-ccCccccCCCCCCEEEccCCccc-cccccc--------------------------------------------
Q 001143 173 HFSIR-YLPPEIGCLSNLEQLDLSFNKMK-YLPTEI-------------------------------------------- 206 (1141)
Q Consensus 173 ~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~-~iP~~l-------------------------------------------- 206 (1141)
+|+++ .+|..++.+++|++|+|++|.++ .+|..+
T Consensus 523 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (768)
T 3rgz_A 523 NNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSE 602 (768)
T ss_dssp SSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGG
T ss_pred CCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccch
Confidence 88888 67888888888888888888887 666543
Q ss_pred --------------------------cCCCCCCEEEccCCCCC-cCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCC
Q 001143 207 --------------------------CYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNL 259 (1141)
Q Consensus 207 --------------------------~~l~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L 259 (1141)
+.+++|+.|+|++|+|+ .||.+++++++|+.|+|++|+|+|.+|..|..+++|
T Consensus 603 ~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L 682 (768)
T 3rgz_A 603 QLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGL 682 (768)
T ss_dssp GGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTC
T ss_pred hhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCC
Confidence 34578999999999998 889999999999999999999999999999999999
Q ss_pred CEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcccccccCCCCCCCCCCCCcCCCC-CCCc
Q 001143 260 QNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPMLENDGNVSFSESD-AGSR 326 (1141)
Q Consensus 260 ~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~l~~~~~~sf~~n~-~~~~ 326 (1141)
+.|||++|++++ .+|..+..+..+..+++++|.+.|.+|. ...+.+|...+|.||+ +|+.
T Consensus 683 ~~LdLs~N~l~g--~ip~~l~~l~~L~~L~ls~N~l~g~iP~-----~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 683 NILDLSSNKLDG--RIPQAMSALTMLTEIDLSNNNLSGPIPE-----MGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp CEEECCSSCCEE--CCCGGGGGCCCCSEEECCSSEEEEECCS-----SSSGGGSCGGGGCSCTEEEST
T ss_pred CEEECCCCcccC--cCChHHhCCCCCCEEECcCCcccccCCC-----chhhccCCHHHhcCCchhcCC
Confidence 999999999998 6999999999999999999999999984 4567889999999995 6743
No 252
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=1.2e-30 Score=331.00 Aligned_cols=274 Identities=20% Similarity=0.231 Sum_probs=242.2
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcCCcE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLRN 95 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~L~~ 95 (1141)
+.++.|.+..|++++..+..|.++++|++|+|++|++++.+|..++.+ ++|++|+|++|.++ .+|..|..+++|++
T Consensus 394 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l---~~L~~L~L~~n~l~~~~p~~~~~l~~L~~ 470 (768)
T 3rgz_A 394 NTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSL---SKLRDLKLWLNMLEGEIPQELMYVKTLET 470 (768)
T ss_dssp CCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC---TTCCEEECCSSCCCSCCCGGGGGCTTCCE
T ss_pred CCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcC---CCCCEEECCCCcccCcCCHHHcCCCCceE
Confidence 479999999999999999999999999999999999999999887666 99999999999998 78999999999999
Q ss_pred EEccCCCCC-cCchhhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC
Q 001143 96 LKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1141)
Q Consensus 96 L~Ls~N~L~-~lP~~~~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1141)
|+|++|+|+ .+|..|.++++|++|+|++|++. .+|..+..+++|++|+|++| .+.+.+|..+..+++|+.|++++
T Consensus 471 L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N---~l~~~~p~~l~~l~~L~~L~Ls~ 547 (768)
T 3rgz_A 471 LILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN---SFSGNIPAELGDCRSLIWLDLNT 547 (768)
T ss_dssp EECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS---CCEEECCGGGGGCTTCCEEECCS
T ss_pred EEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCC---cccCcCCHHHcCCCCCCEEECCC
Confidence 999999998 78999999999999999999966 78889999999999999995 45678889999999999999999
Q ss_pred CCCC-ccCccc---------------------------------------------------------------------
Q 001143 174 FSIR-YLPPEI--------------------------------------------------------------------- 183 (1141)
Q Consensus 174 N~L~-~iP~~l--------------------------------------------------------------------- 183 (1141)
|.++ .+|..+
T Consensus 548 N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~ 627 (768)
T 3rgz_A 548 NLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPT 627 (768)
T ss_dssp SEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCS
T ss_pred CccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchh
Confidence 9987 666543
Q ss_pred -cCCCCCCEEEccCCccc-cccccccCCCCCCEEEccCCCCC-cCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCC
Q 001143 184 -GCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQ 260 (1141)
Q Consensus 184 -~~l~~L~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~ 260 (1141)
+.+++|+.|+|++|+|+ .+|..|+.+++|+.|+|++|+|+ .||..++++++|+.|||++|+|+|.+|..+..+++|+
T Consensus 628 ~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~ 707 (768)
T 3rgz_A 628 FDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLT 707 (768)
T ss_dssp CSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCS
T ss_pred hhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCC
Confidence 33578999999999999 89999999999999999999998 8999999999999999999999999999999999999
Q ss_pred EEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccC
Q 001143 261 NLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 261 ~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~ 298 (1141)
.|+|++|+|+| +||..-............++.+||.
T Consensus 708 ~L~ls~N~l~g--~iP~~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 708 EIDLSNNNLSG--PIPEMGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp EEECCSSEEEE--ECCSSSSGGGSCGGGGCSCTEEEST
T ss_pred EEECcCCcccc--cCCCchhhccCCHHHhcCCchhcCC
Confidence 99999999999 6786533222222222344456654
No 253
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=4.6e-30 Score=288.91 Aligned_cols=272 Identities=20% Similarity=0.202 Sum_probs=237.7
Q ss_pred cccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc---CccccCCcCCcEEE
Q 001143 21 KLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI---PKSVGRYEKLRNLK 97 (1141)
Q Consensus 21 ~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i---P~~l~~L~~L~~L~ 97 (1141)
.+....++|+.++...+ ++|++|+|++|+|+...+..|+ ++++|++|+|++|.|+.+ |..+..+++|++|+
T Consensus 11 ~l~c~~~~l~~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~---~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 11 EIRCNSKGLTSVPTGIP---SSATRLELESNKLQSLPHGVFD---KLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp EEECCSSCCSSCCSCCC---TTCCEEECCSSCCCCCCTTTTT---TCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred EEEcCCCCcccCCCCCC---CCCCEEECCCCccCccCHhHhh---ccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 57778888998887544 6899999999999977665554 459999999999999865 56788899999999
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc--cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001143 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF--ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1141)
Q Consensus 98 Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~--~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1141)
|++|.|+.+|..+.++++|+.|+|++|.+..++. .+..+++|++|++++|.+ ....+..+..+++|+.|++++|.
T Consensus 85 Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l---~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 85 LSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT---RVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp CCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCC---EECSTTTTTTCTTCCEEECTTCE
T ss_pred CCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcC---CccchhhcccCcCCCEEECCCCc
Confidence 9999999999999999999999999999877764 799999999999999654 44556778999999999999999
Q ss_pred CCc--cCccccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCCc-CccCCCCCCEEeCCCCCCCCCCcc
Q 001143 176 IRY--LPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSL 251 (1141)
Q Consensus 176 L~~--iP~~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lt~~~p~ 251 (1141)
++. +|..+..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++|+|++.+|.
T Consensus 162 l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 241 (306)
T 2z66_A 162 FQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQ 241 (306)
T ss_dssp EGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSS
T ss_pred cccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHH
Confidence 985 688999999999999999999976 6789999999999999999998865 678899999999999999999998
Q ss_pred cccCCC-CCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCccc
Q 001143 252 DLCLMH-NLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAE 301 (1141)
Q Consensus 252 ~l~~L~-~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~~ 301 (1141)
.+..++ +|+.|+|++|+|+|.|++++...|......+....+.+.|..|.
T Consensus 242 ~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~~~C~~p~ 292 (306)
T 2z66_A 242 ELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVERMECATPS 292 (306)
T ss_dssp SCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGGCBEEESG
T ss_pred HHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccccccCCch
Confidence 999985 99999999999999988887777777776666667777777664
No 254
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=7.5e-29 Score=282.29 Aligned_cols=267 Identities=22% Similarity=0.288 Sum_probs=214.3
Q ss_pred CCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001143 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1141)
Q Consensus 16 ~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1141)
++.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..|..|+. +++|++|+|++|.|+.+|..+. ++|+.
T Consensus 51 ~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---l~~L~~L~Ls~n~l~~l~~~~~--~~L~~ 125 (330)
T 1xku_A 51 PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAP---LVKLERLYLSKNQLKELPEKMP--KTLQE 125 (330)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTT---CTTCCEEECCSSCCSBCCSSCC--TTCCE
T ss_pred CCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcC---CCCCCEEECCCCcCCccChhhc--ccccE
Confidence 457888899999999998888999999999999999999887776654 4889999999999998887765 68999
Q ss_pred EEccCCCCCcCch-hhcCCCCCCEEEccCCCCC---CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEc
Q 001143 96 LKFFGNEINLFPS-EVGNLLGLECLQIKISSPG---VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1141)
Q Consensus 96 L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~---~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~L 171 (1141)
|+|++|+|+.++. .|.++++|+.|+|++|.+. ..+..+..+++|++|++++|.+.. +|..+. ++|+.|++
T Consensus 126 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~----l~~~~~--~~L~~L~l 199 (330)
T 1xku_A 126 LRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITT----IPQGLP--PSLTELHL 199 (330)
T ss_dssp EECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCS----CCSSCC--TTCSEEEC
T ss_pred EECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCcccc----CCcccc--ccCCEEEC
Confidence 9999999987754 4888999999999998876 445678889999999999876653 444432 78899999
Q ss_pred cCCCCCcc-CccccCCCCCCEEEccCCcccccc-ccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCC
Q 001143 172 CHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLG 249 (1141)
Q Consensus 172 s~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~ 249 (1141)
++|+++.+ |..+..+++|+.|+|++|.|+.++ ..+..+++|+.|+|++|+|+.+|..+..+++|+.|+|++|+|++++
T Consensus 200 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~i~~~~ 279 (330)
T 1xku_A 200 DGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIG 279 (330)
T ss_dssp TTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCTTTTTCSSCCEEECCSSCCCCCC
T ss_pred CCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCChhhccCCCcCEEECCCCcCCccC
Confidence 99999866 567888999999999999998765 4788889999999999999999988888999999999999999988
Q ss_pred cccccCC------CCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCC
Q 001143 250 SLDLCLM------HNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSND 293 (1141)
Q Consensus 250 p~~l~~L------~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n 293 (1141)
+..|+.. +.|..|++++|++..+.-.|..+.+......+++++|
T Consensus 280 ~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 280 SNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp TTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred hhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 8777643 6788999999998765444555555555555554443
No 255
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.96 E-value=5.7e-29 Score=294.93 Aligned_cols=280 Identities=19% Similarity=0.143 Sum_probs=198.1
Q ss_pred CCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCc
Q 001143 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLR 94 (1141)
Q Consensus 16 ~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~ 94 (1141)
++.++.|.+..|+|+.+.+..|.++++|++|+|++|.+.+.++. ..|.++++|++|+|++|.++.+ |..|.++++|+
T Consensus 29 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~--~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 106 (455)
T 3v47_A 29 PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRN--NTFRGLSSLIILKLDYNQFLQLETGAFNGLANLE 106 (455)
T ss_dssp CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECT--TTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCC
T ss_pred CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECc--ccccccccCCEEeCCCCccCccChhhccCcccCC
Confidence 35788889999999988888888999999999999888765533 2234558888888888888866 66788888888
Q ss_pred EEEccCCCCCc-Cchh--hcCCCCCCEEEccCCCCCCC-ccc-ccCCCCCCEEECCCCCCCCCcccc-------------
Q 001143 95 NLKFFGNEINL-FPSE--VGNLLGLECLQIKISSPGVN-GFA-LNKLKGLKELELSKVPPRPSVLTL------------- 156 (1141)
Q Consensus 95 ~L~Ls~N~L~~-lP~~--~~~L~~L~~L~Ls~N~l~~~-~~~-~~~L~~L~~L~Ls~N~ln~~~~~l------------- 156 (1141)
+|+|++|+|+. +|.. |.++++|++|+|++|.+..+ |.. +.++++|++|++++|.+.......
T Consensus 107 ~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~ 186 (455)
T 3v47_A 107 VLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLR 186 (455)
T ss_dssp EEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEE
T ss_pred EEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccc
Confidence 88888888874 4444 78888888888888887665 433 778888888888887654332110
Q ss_pred ------------------------------------------hhhhc---------------------------------
Q 001143 157 ------------------------------------------LSEIA--------------------------------- 161 (1141)
Q Consensus 157 ------------------------------------------p~~l~--------------------------------- 161 (1141)
|..+.
T Consensus 187 l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~ 266 (455)
T 3v47_A 187 LSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDN 266 (455)
T ss_dssp CTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCT
T ss_pred cccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcc
Confidence 00000
Q ss_pred ------CCCCCcEEEccCCCCCcc-CccccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcC-CcCccCC
Q 001143 162 ------GLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYLL 232 (1141)
Q Consensus 162 ------~L~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L 232 (1141)
..++|+.|++++|.++.+ |..++.+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |..+..+
T Consensus 267 ~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l 346 (455)
T 3v47_A 267 FTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENL 346 (455)
T ss_dssp TTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTC
T ss_pred cccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCc
Confidence 013455555555555533 55567777777777777777755 45677777777777777777755 4556667
Q ss_pred CCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCch-hhhhcccCCCCCCCCCCcccCcc
Q 001143 233 QRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPS-WICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 233 ~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~-~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
++|+.|+|++|+|++++|..|..+++|+.|+|++|++++ +|. .+........+++.+|.+.|..|
T Consensus 347 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 347 DKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKS---VPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSC---CCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred ccCCEEECCCCcccccChhhccccccccEEECCCCcccc---CCHhHhccCCcccEEEccCCCcccCCC
Confidence 777777777777777777777777777777777777776 443 33455566677777777776655
No 256
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.96 E-value=8.5e-29 Score=282.27 Aligned_cols=264 Identities=21% Similarity=0.308 Sum_probs=175.8
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1141)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|.|+.+|..+. ++|++|
T Consensus 54 ~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~--~~L~~L 128 (332)
T 2ft3_A 54 PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPL---RKLQKLYISKNHLVEIPPNLP--SSLVEL 128 (332)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTC---TTCCEEECCSSCCCSCCSSCC--TTCCEE
T ss_pred CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCc---CCCCEEECCCCcCCccCcccc--ccCCEE
Confidence 456777777777777777777777777777777777777666555433 777777777777777776554 567777
Q ss_pred EccCCCCCcCchh-hcCCCCCCEEEccCCCCC---CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEcc
Q 001143 97 KFFGNEINLFPSE-VGNLLGLECLQIKISSPG---VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC 172 (1141)
Q Consensus 97 ~Ls~N~L~~lP~~-~~~L~~L~~L~Ls~N~l~---~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls 172 (1141)
+|++|+|+.+|.. |.++++|+.|+|++|.++ ..+..+..+ +|++|++++|.+.. +|..+. ++|+.|+++
T Consensus 129 ~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~----l~~~~~--~~L~~L~l~ 201 (332)
T 2ft3_A 129 RIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG----IPKDLP--ETLNELHLD 201 (332)
T ss_dssp ECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS----CCSSSC--SSCSCCBCC
T ss_pred ECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc----cCcccc--CCCCEEECC
Confidence 7777777766543 667777777777777754 344455556 77777777755543 333332 567777777
Q ss_pred CCCCCccC-ccccCCCCCCEEEccCCcccccc-ccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCc
Q 001143 173 HFSIRYLP-PEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 173 ~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
+|.++.++ ..+..+++|+.|+|++|+|+.++ ..+..+++|+.|+|++|+|+.+|..+..+++|+.|+|++|+|+++++
T Consensus 202 ~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~L~~L~l~~N~l~~~~~ 281 (332)
T 2ft3_A 202 HNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPAGLPDLKLLQVVYLHTNNITKVGV 281 (332)
T ss_dssp SSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCTTGGGCTTCCEEECCSSCCCBCCT
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecChhhhcCccCCEEECCCCCCCccCh
Confidence 77777654 46677777777777777777654 35777777777777777777777777777777777777777777776
Q ss_pred ccccCC------CCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCC
Q 001143 251 LDLCLM------HNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSN 292 (1141)
Q Consensus 251 ~~l~~L------~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~ 292 (1141)
..|..+ +.|+.|++++|++....-.|..+........+.+.+
T Consensus 282 ~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l~~ 329 (332)
T 2ft3_A 282 NDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQFGN 329 (332)
T ss_dssp TSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC--
T ss_pred hHccccccccccccccceEeecCcccccccCcccccccchhhhhhccc
Confidence 666543 467777777777764323444444444444444433
No 257
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=2.4e-28 Score=289.64 Aligned_cols=256 Identities=20% Similarity=0.283 Sum_probs=225.3
Q ss_pred cccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEE
Q 001143 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLK 97 (1141)
Q Consensus 19 l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~ 97 (1141)
...+....++|+.++.... .+++.|+|++|+|++..+..|..+ ++|++|+|++|.|+.++ ..|.++++|++|+
T Consensus 45 ~~~v~c~~~~l~~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l---~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~ 118 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGIS---TNTRLLNLHENQIQIIKVNSFKHL---RHLEILQLSRNHIRTIEIGAFNGLANLNTLE 118 (440)
T ss_dssp SCEEECCSCCCSSCCSCCC---TTCSEEECCSCCCCEECTTTTSSC---SSCCEEECCSSCCCEECGGGGTTCSSCCEEE
T ss_pred CCEEEeCCCCcCcCCCCCC---CCCcEEEccCCcCCeeCHHHhhCC---CCCCEEECCCCcCCccChhhccCCccCCEEE
Confidence 4467777888999887554 688999999999999888766554 99999999999999886 5799999999999
Q ss_pred ccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchh-hhcCCCCCcEEEccCC
Q 001143 98 FFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLS-EIAGLKCLTKLSVCHF 174 (1141)
Q Consensus 98 Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp~-~l~~L~~L~~L~Ls~N 174 (1141)
|++|+|+.+|. .|.++++|+.|+|++|.+..++. .|..+++|++|+|++| +....++. .|.++++|+.|+|++|
T Consensus 119 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~---~~l~~i~~~~~~~l~~L~~L~L~~n 195 (440)
T 3zyj_A 119 LFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGEL---KRLSYISEGAFEGLSNLRYLNLAMC 195 (440)
T ss_dssp CCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC---TTCCEECTTTTTTCSSCCEEECTTS
T ss_pred CCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCC---CCcceeCcchhhcccccCeecCCCC
Confidence 99999999876 58999999999999999887775 7999999999999984 33444444 6889999999999999
Q ss_pred CCCccCccccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEeCCCCCCCCCCccc
Q 001143 175 SIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLD 252 (1141)
Q Consensus 175 ~L~~iP~~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~Lt~~~p~~ 252 (1141)
+|+.+|. +..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |..+.++++|+.|+|++|+|+++++..
T Consensus 196 ~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 274 (440)
T 3zyj_A 196 NLREIPN-LTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDL 274 (440)
T ss_dssp CCSSCCC-CTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTTT
T ss_pred cCccccc-cCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChhH
Confidence 9999985 78999999999999999976 67899999999999999999977 567888999999999999999999988
Q ss_pred ccCCCCCCEEEccCCcCCCCCCCchhhhhccc
Q 001143 253 LCLMHNLQNLNLQYNKLLSYCQVPSWICCNLE 284 (1141)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~ 284 (1141)
|..+++|+.|+|++|+|.|+|.+-+...|...
T Consensus 275 ~~~l~~L~~L~L~~Np~~CdC~l~~l~~~~~~ 306 (440)
T 3zyj_A 275 FTPLHHLERIHLHHNPWNCNCDILWLSWWIKD 306 (440)
T ss_dssp TSSCTTCCEEECCSSCEECSSTTHHHHHHHHT
T ss_pred hccccCCCEEEcCCCCccCCCCchHHHHHHHh
Confidence 99999999999999999999998765555443
No 258
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=6.6e-30 Score=289.89 Aligned_cols=248 Identities=20% Similarity=0.225 Sum_probs=215.8
Q ss_pred CCCCEEEccCCCCCC--CCcccccCCCCCCCccEEEeec-CCCC-ccCccccCCcCCcEEEccCCCCC-cCchhhcCCCC
Q 001143 41 DDDSVIDVSGKTVDF--PLIESYGNRGGDNSVEGLYLYK-NVLN-LIPKSVGRYEKLRNLKFFGNEIN-LFPSEVGNLLG 115 (1141)
Q Consensus 41 ~~L~~LdLs~N~Ls~--~~p~~~~~l~~L~~L~~L~Ls~-N~Lt-~iP~~l~~L~~L~~L~Ls~N~L~-~lP~~~~~L~~ 115 (1141)
..++.|+|++|+|++ .+|..++.+ ++|++|+|++ |.++ .+|..|.++++|++|+|++|+|+ .+|..|.++++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l---~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~ 126 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANL---PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGC---TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTT
T ss_pred ceEEEEECCCCCccCCcccChhHhCC---CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCC
Confidence 579999999999998 788777655 9999999994 8887 78889999999999999999998 78999999999
Q ss_pred CCEEEccCCCCC-CCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCC-CCcEEEccCCCCC-ccCccccCCCCCCEE
Q 001143 116 LECLQIKISSPG-VNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLK-CLTKLSVCHFSIR-YLPPEIGCLSNLEQL 192 (1141)
Q Consensus 116 L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~-~L~~L~Ls~N~L~-~iP~~l~~l~~L~~L 192 (1141)
|++|+|++|.+. .+|..+..+++|++|++++|. +.+.+|..+..++ +|+.|++++|+++ .+|..+..+. |+.|
T Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR---ISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC---CEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEE
T ss_pred CCEEeCCCCccCCcCChHHhcCCCCCeEECcCCc---ccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEE
Confidence 999999999966 788889999999999999954 4557788899998 9999999999999 7788888887 9999
Q ss_pred EccCCccc-cccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 001143 193 DLSFNKMK-YLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 193 ~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
+|++|+|+ .+|..+..+++|+.|+|++|+++..++.+..+++|+.|+|++|+|++.+|..|..+++|+.|+|++|++++
T Consensus 203 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred ECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 99999998 56788999999999999999998665568889999999999999998888899999999999999999997
Q ss_pred CCCCchhhhhcccCCCCCCCCCC-cccC
Q 001143 272 YCQVPSWICCNLEGNGKDSSNDD-FISS 298 (1141)
Q Consensus 272 ~~~iP~~~~~~l~~~~l~~~~n~-l~~~ 298 (1141)
.+|.. ..+.....+.+.+|. +|+.
T Consensus 283 --~ip~~-~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 283 --EIPQG-GNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp --ECCCS-TTGGGSCGGGTCSSSEEEST
T ss_pred --cCCCC-ccccccChHHhcCCCCccCC
Confidence 47765 556667778888887 4543
No 259
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.96 E-value=2.5e-28 Score=299.75 Aligned_cols=133 Identities=16% Similarity=0.092 Sum_probs=117.7
Q ss_pred CCCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcC
Q 001143 14 PEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEK 92 (1141)
Q Consensus 14 ~~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~ 92 (1141)
+-|++++.|++..|+|+.|.+.+|.++++|++|||++|+|+++.+..|+ +|++|++|+|++|+|+.+|. .|.++++
T Consensus 49 ~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~---~L~~L~~L~Ls~N~l~~l~~~~f~~L~~ 125 (635)
T 4g8a_A 49 NLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQ---SLSHLSTLILTGNPIQSLALGAFSGLSS 125 (635)
T ss_dssp SSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTT---TCTTCCEEECTTCCCCEECGGGGTTCTT
T ss_pred CCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhc---CCCCCCEEEccCCcCCCCCHHHhcCCCC
Confidence 3456799999999999999999999999999999999999998887665 45999999999999999986 5899999
Q ss_pred CcEEEccCCCCCcCch-hhcCCCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCCC
Q 001143 93 LRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVPP 149 (1141)
Q Consensus 93 L~~L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~~--~~~~~~~L~~L~~L~Ls~N~l 149 (1141)
|++|+|++|+|+.+|. .|++|++|++|+|++|.+.. .|..+..+++|++|+|++|.+
T Consensus 126 L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l 185 (635)
T 4g8a_A 126 LQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKI 185 (635)
T ss_dssp CCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCC
T ss_pred CCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccc
Confidence 9999999999998876 48999999999999999765 456788899999999988764
No 260
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.96 E-value=3.7e-29 Score=283.70 Aligned_cols=247 Identities=17% Similarity=0.183 Sum_probs=223.9
Q ss_pred CCcccccCCCCCccc--cCCCCCCCCCCCCEEEccC-CCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcC
Q 001143 17 PIKEKLPSEANKINN--EKNGSVNDDDDDSVIDVSG-KTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEK 92 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~--i~~~~f~~l~~L~~LdLs~-N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~ 92 (1141)
..+..|.+..|+|++ ..+..|.++++|++|+|++ |++++.+|..|+.+ ++|++|+|++|.|+ .+|..|.++++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l---~~L~~L~Ls~n~l~~~~p~~~~~l~~ 126 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKL---TQLHYLYITHTNVSGAIPDFLSQIKT 126 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGC---TTCSEEEEEEECCEEECCGGGGGCTT
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcC---CCCCEEECcCCeeCCcCCHHHhCCCC
Confidence 368889999999998 6778999999999999995 99999999887665 99999999999998 78999999999
Q ss_pred CcEEEccCCCCC-cCchhhcCCCCCCEEEccCCCCC-CCcccccCCC-CCCEEECCCCCCCCCcccchhhhcCCCCCcEE
Q 001143 93 LRNLKFFGNEIN-LFPSEVGNLLGLECLQIKISSPG-VNGFALNKLK-GLKELELSKVPPRPSVLTLLSEIAGLKCLTKL 169 (1141)
Q Consensus 93 L~~L~Ls~N~L~-~lP~~~~~L~~L~~L~Ls~N~l~-~~~~~~~~L~-~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L 169 (1141)
|++|+|++|.|+ .+|..|.++++|++|+|++|.+. .+|..+..++ +|++|++++|. +.+.+|..+..++ |+.|
T Consensus 127 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~---l~~~~~~~~~~l~-L~~L 202 (313)
T 1ogq_A 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR---LTGKIPPTFANLN-LAFV 202 (313)
T ss_dssp CCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSE---EEEECCGGGGGCC-CSEE
T ss_pred CCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCe---eeccCChHHhCCc-ccEE
Confidence 999999999998 78999999999999999999987 7888999998 99999999954 4567788888887 9999
Q ss_pred EccCCCCC-ccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCC-cCCcCccCCCCCCEEeCCCCCCCC
Q 001143 170 SVCHFSIR-YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 170 ~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
++++|+++ .+|..+..+++|+.|+|++|+|+..+..+..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++
T Consensus 203 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 282 (313)
T 1ogq_A 203 DLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCG 282 (313)
T ss_dssp ECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred ECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccc
Confidence 99999999 5577889999999999999999966666889999999999999998 889999999999999999999999
Q ss_pred CCcccccCCCCCCEEEccCCcCCC
Q 001143 248 LGSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 248 ~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
.+|.. ..+++|+.|++++|+.-|
T Consensus 283 ~ip~~-~~l~~L~~l~l~~N~~lc 305 (313)
T 1ogq_A 283 EIPQG-GNLQRFDVSAYANNKCLC 305 (313)
T ss_dssp ECCCS-TTGGGSCGGGTCSSSEEE
T ss_pred cCCCC-ccccccChHHhcCCCCcc
Confidence 88854 889999999999999444
No 261
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.8e-28 Score=288.99 Aligned_cols=255 Identities=20% Similarity=0.249 Sum_probs=223.9
Q ss_pred cccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEE
Q 001143 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLK 97 (1141)
Q Consensus 19 l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~ 97 (1141)
...+....++++.++.... ++|++|+|++|+|++..+..|+.+ ++|++|+|++|.|+.++ ..|.++++|++|+
T Consensus 56 ~~~v~c~~~~l~~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 129 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIP---SNTRYLNLMENNIQMIQADTFRHL---HHLEVLQLGRNSIRQIEVGAFNGLASLNTLE 129 (452)
T ss_dssp SCEEECCSSCCSSCCSCCC---TTCSEEECCSSCCCEECTTTTTTC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CcEEEECCCCcCccCCCCC---CCccEEECcCCcCceECHHHcCCC---CCCCEEECCCCccCCcChhhccCcccCCEEE
Confidence 4567777888888876443 689999999999999988776555 99999999999999886 5799999999999
Q ss_pred ccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchh-hhcCCCCCcEEEccCC
Q 001143 98 FFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLS-EIAGLKCLTKLSVCHF 174 (1141)
Q Consensus 98 Ls~N~L~~lP~~-~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp~-~l~~L~~L~~L~Ls~N 174 (1141)
|++|+|+.+|.. |.++++|+.|+|++|.+..++. .|..+++|++|++++| +....++. .|.++++|+.|+|++|
T Consensus 130 L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~---~~l~~i~~~~~~~l~~L~~L~L~~n 206 (452)
T 3zyi_A 130 LFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGEL---KKLEYISEGAFEGLFNLKYLNLGMC 206 (452)
T ss_dssp CCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCC---TTCCEECTTTTTTCTTCCEEECTTS
T ss_pred CCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCC---CCccccChhhccCCCCCCEEECCCC
Confidence 999999988765 8889999999999999887775 7999999999999983 33444544 6889999999999999
Q ss_pred CCCccCccccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEeCCCCCCCCCCccc
Q 001143 175 SIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLD 252 (1141)
Q Consensus 175 ~L~~iP~~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~Lt~~~p~~ 252 (1141)
+|+.+|. +..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+++++..
T Consensus 207 ~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 285 (452)
T 3zyi_A 207 NIKDMPN-LTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDL 285 (452)
T ss_dssp CCSSCCC-CTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTS
T ss_pred ccccccc-ccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHH
Confidence 9999874 78999999999999999966 77899999999999999999976 677888999999999999999999988
Q ss_pred ccCCCCCCEEEccCCcCCCCCCCchhhhhcc
Q 001143 253 LCLMHNLQNLNLQYNKLLSYCQVPSWICCNL 283 (1141)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l 283 (1141)
|..+++|+.|+|++|+|.|+|.+-+...|..
T Consensus 286 ~~~l~~L~~L~L~~Np~~CdC~~~~l~~~l~ 316 (452)
T 3zyi_A 286 FTPLRYLVELHLHHNPWNCDCDILWLAWWLR 316 (452)
T ss_dssp STTCTTCCEEECCSSCEECSTTTHHHHHHHH
T ss_pred hccccCCCEEEccCCCcCCCCCchHHHHHHH
Confidence 9999999999999999999999875554443
No 262
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=3e-28 Score=291.16 Aligned_cols=276 Identities=19% Similarity=0.159 Sum_probs=223.2
Q ss_pred CCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCC
Q 001143 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKL 93 (1141)
Q Consensus 15 ~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L 93 (1141)
.++.+..|.+..|+|+.+.+..|.++++|++|+|++|.|++..|..|+. +++|++|+|++|+|+.+|. .|.++++|
T Consensus 30 ~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L 106 (477)
T 2id5_A 30 IPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNN---LFNLRTLGLRSNRLKLIPLGVFTGLSNL 106 (477)
T ss_dssp CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTT---CTTCCEEECCSSCCCSCCTTSSTTCTTC
T ss_pred CCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhC---CccCCEEECCCCcCCccCcccccCCCCC
Confidence 3457999999999999999999999999999999999999988876654 4999999999999999986 47899999
Q ss_pred cEEEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEc
Q 001143 94 RNLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1141)
Q Consensus 94 ~~L~Ls~N~L~~l-P~~~~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~L 171 (1141)
++|+|++|+|+.+ |..|.++++|+.|+|++|.+..++ ..|..+++|+.|+|++|.+... .+..|.++++|+.|+|
T Consensus 107 ~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~l~~L~~L~l 183 (477)
T 2id5_A 107 TKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSI---PTEALSHLHGLIVLRL 183 (477)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSC---CHHHHTTCTTCCEEEE
T ss_pred CEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCccc---ChhHhcccCCCcEEeC
Confidence 9999999999966 667999999999999999977654 5799999999999999766432 3446888999999999
Q ss_pred cCCCCCccCc-cccCCCCCCEEEccCCccc-cccccccCCCCCCEEEccCCCCCcCC-cCccCCCCCCEEeCCCCCCCCC
Q 001143 172 CHFSIRYLPP-EIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNKLVELP-SGLYLLQRLENLDLSNNRLTSL 248 (1141)
Q Consensus 172 s~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~~IP-~~l~~L~~L~~L~Ls~N~Lt~~ 248 (1141)
++|.++.++. .|..+++|+.|+|++|.+. .+|..+....+|+.|+|++|+|+.+| ..+..+++|+.|+|++|+|+++
T Consensus 184 ~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 263 (477)
T 2id5_A 184 RHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTI 263 (477)
T ss_dssp ESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEE
T ss_pred CCCcCcEeChhhcccCcccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCcc
Confidence 9999997654 6788888888888887654 66766666667788888888777776 3566677777888887777777
Q ss_pred CcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccC
Q 001143 249 GSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 249 ~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~ 298 (1141)
++..|..+++|+.|+|++|++++. .|..+.....+..+++++|.+...
T Consensus 264 ~~~~~~~l~~L~~L~L~~n~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~ 311 (477)
T 2id5_A 264 EGSMLHELLRLQEIQLVGGQLAVV--EPYAFRGLNYLRVLNVSGNQLTTL 311 (477)
T ss_dssp CTTSCTTCTTCCEEECCSSCCSEE--CTTTBTTCTTCCEEECCSSCCSCC
T ss_pred ChhhccccccCCEEECCCCccceE--CHHHhcCcccCCEEECCCCcCcee
Confidence 777777777777777777777762 455555566666666776666543
No 263
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.96 E-value=6.7e-28 Score=288.09 Aligned_cols=272 Identities=18% Similarity=0.183 Sum_probs=185.1
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRN 95 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~ 95 (1141)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..+..|+ ++++|++|+|++|+|+.+ |..|.++++|+.
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~---~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~ 132 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFT---GLSNLTKLDISENKIVILLDYMFQDLYNLKS 132 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSST---TCTTCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCccccc---CCCCCCEEECCCCccccCChhHccccccCCE
Confidence 4788888999999999889999999999999999999887766554 448899999999988866 456888888999
Q ss_pred EEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC
Q 001143 96 LKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1141)
Q Consensus 96 L~Ls~N~L~~l-P~~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1141)
|+|++|.|+.+ |..|.++++|+.|+|++|.++.++. .+..+++|+.|+|++|.+.. ..+..|..+++|+.|++++
T Consensus 133 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~---~~~~~~~~l~~L~~L~l~~ 209 (477)
T 2id5_A 133 LEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINA---IRDYSFKRLYRLKVLEISH 209 (477)
T ss_dssp EEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCE---ECTTCSCSCTTCCEEEEEC
T ss_pred EECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcE---eChhhcccCcccceeeCCC
Confidence 99999988866 5568888888888888888777664 57888888888888865533 2233566666666666666
Q ss_pred CCCC-ccCccccCCCCCCEEEccCCcccccc-ccccCCCCCCEEEccCCCCCcCC-cCccCCCCCCEEeCCCCCCCCCCc
Q 001143 174 FSIR-YLPPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELP-SGLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 174 N~L~-~iP~~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~IP-~~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
|.+. .+|..+....+|+.|+|++|+|+.+| ..+..+++|+.|+|++|+|+.+| ..+..+++|+.|+|++|+|++++|
T Consensus 210 ~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 289 (477)
T 2id5_A 210 WPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEP 289 (477)
T ss_dssp CTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECT
T ss_pred CccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECH
Confidence 5433 45554444456666666666666555 34555666666666666666543 334556666666666666666655
Q ss_pred ccccCCCCCCEEEccCCcCCCCCCCch-hhhhcccCCCCCCCCCCccc
Q 001143 251 LDLCLMHNLQNLNLQYNKLLSYCQVPS-WICCNLEGNGKDSSNDDFIS 297 (1141)
Q Consensus 251 ~~l~~L~~L~~L~Ls~N~L~~~~~iP~-~~~~~l~~~~l~~~~n~l~~ 297 (1141)
..|..+++|+.|+|++|+|+. +|. .+.....+..+++.+|.+.|
T Consensus 290 ~~~~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~l~~N~l~c 334 (477)
T 2id5_A 290 YAFRGLNYLRVLNVSGNQLTT---LEESVFHSVGNLETLILDSNPLAC 334 (477)
T ss_dssp TTBTTCTTCCEEECCSSCCSC---CCGGGBSCGGGCCEEECCSSCEEC
T ss_pred HHhcCcccCCEEECCCCcCce---eCHhHcCCCcccCEEEccCCCccC
Confidence 556666666666666666655 332 22333344445555555443
No 264
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=1.9e-27 Score=277.07 Aligned_cols=267 Identities=18% Similarity=0.157 Sum_probs=194.9
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNL 96 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~L 96 (1141)
.++.|.+..|+|+.+.+..|.++++|++|+|++|++++.+|..|+.+ ++|++|+|++|.|+.+|.. |.++++|++|
T Consensus 70 ~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 146 (390)
T 3o6n_A 70 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNV---PLLTVLVLERNDLSSLPRGIFHNTPKLTTL 146 (390)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCC---CCCCEEECCCCccCcCCHHHhcCCCCCcEE
Confidence 57777777777777777777777777777777777777766655443 7777777777777777765 4677777777
Q ss_pred EccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCC---------------cccchhhh
Q 001143 97 KFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPS---------------VLTLLSEI 160 (1141)
Q Consensus 97 ~Ls~N~L~~l-P~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~---------------~~~lp~~l 160 (1141)
+|++|.|+.+ |..|.++++|+.|+|++|.++.++ +..+++|+.|++++|.+... ...+|..
T Consensus 147 ~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~- 223 (390)
T 3o6n_A 147 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGP- 223 (390)
T ss_dssp ECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECC-
T ss_pred ECCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccccccccCCCCcceEEECCCCeeeecccc-
Confidence 7777777766 344777777777777777766554 34444554444444333211 1111221
Q ss_pred cCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEe
Q 001143 161 AGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGLYLLQRLENLD 239 (1141)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~ 239 (1141)
..++|+.|++++|.++.+ ..+..+++|+.|+|++|.|+.+ |..+..+++|+.|+|++|+|+.+|..+..+++|+.|+
T Consensus 224 -~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~ 301 (390)
T 3o6n_A 224 -VNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLD 301 (390)
T ss_dssp -CCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEE
T ss_pred -ccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEE
Confidence 235788889999998876 4678889999999999999855 7788889999999999999998888888889999999
Q ss_pred CCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccC
Q 001143 240 LSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 240 Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~ 298 (1141)
|++|+|+++++ .+..+++|+.|+|++|+++. +| +........+++.+|.+.|.
T Consensus 302 L~~n~l~~~~~-~~~~l~~L~~L~L~~N~i~~---~~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 302 LSHNHLLHVER-NQPQFDRLENLYLDHNSIVT---LK--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CCSSCCCCCGG-GHHHHTTCSEEECCSSCCCC---CC--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCcceecCc-cccccCcCCEEECCCCccce---eC--chhhccCCEEEcCCCCccch
Confidence 99999987765 67788899999999999886 44 44455667788888888764
No 265
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=1.4e-28 Score=305.58 Aligned_cols=272 Identities=16% Similarity=0.157 Sum_probs=169.6
Q ss_pred CCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCC-CCC-CCcccccCC---CCCCCccEEEeecCCCCccCc--ccc
Q 001143 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKT-VDF-PLIESYGNR---GGDNSVEGLYLYKNVLNLIPK--SVG 88 (1141)
Q Consensus 16 ~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~-Ls~-~~p~~~~~l---~~L~~L~~L~Ls~N~Lt~iP~--~l~ 88 (1141)
-+.++.|.+..|++.+..+..|.++++|++|+|++|+ +++ .+|..++.+ ..+++|++|+|++|+|+.||. .|.
T Consensus 248 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~ 327 (636)
T 4eco_A 248 LKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQ 327 (636)
T ss_dssp CTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHT
T ss_pred cCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhc
Confidence 3578899999999999889999999999999999998 998 777766542 233678888888888888887 788
Q ss_pred CCcCCcEEEccCCCCC-cCchhhcCCCCCCEEEccCCCCCCCcccccCCCC-CCEEECCCCCCCCCcccchhhhcC----
Q 001143 89 RYEKLRNLKFFGNEIN-LFPSEVGNLLGLECLQIKISSPGVNGFALNKLKG-LKELELSKVPPRPSVLTLLSEIAG---- 162 (1141)
Q Consensus 89 ~L~~L~~L~Ls~N~L~-~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~-L~~L~Ls~N~ln~~~~~lp~~l~~---- 162 (1141)
++++|+.|+|++|+|+ .+| .|+++++|+.|+|++|.+..+|..+..+++ |++|++++|.+. .+|..+..
T Consensus 328 ~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~~lp~~l~~l~~~L~~L~Ls~N~l~----~lp~~~~~~~l~ 402 (636)
T 4eco_A 328 KMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQITEIPANFCGFTEQVENLSFAHNKLK----YIPNIFDAKSVS 402 (636)
T ss_dssp TCTTCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEEECCTTSEEECTTCCEEECCSSCCS----SCCSCCCTTCSS
T ss_pred cCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccccccHhhhhhcccCcEEEccCCcCc----ccchhhhhcccC
Confidence 8888888888888887 777 677777777777777776666666777777 777777775543 33433333
Q ss_pred -----------------------------CCCCcEEEccCCCCCccCccc-cCCCCCCEEEccCCccccccccccCC---
Q 001143 163 -----------------------------LKCLTKLSVCHFSIRYLPPEI-GCLSNLEQLDLSFNKMKYLPTEICYL--- 209 (1141)
Q Consensus 163 -----------------------------L~~L~~L~Ls~N~L~~iP~~l-~~l~~L~~L~Ls~N~L~~iP~~l~~l--- 209 (1141)
+++|+.|+|++|+|+.+|..+ ..+++|+.|+|++|+|+.+|..+...
T Consensus 403 ~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~ 482 (636)
T 4eco_A 403 VMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENE 482 (636)
T ss_dssp CEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTE
T ss_pred ccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccc
Confidence 334444444444444444432 23445555555555555444332221
Q ss_pred -----CCCCEEEccCCCCCcCCcCcc--CCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEcc------CCcCCCCCCCc
Q 001143 210 -----KALISLKVANNKLVELPSGLY--LLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQ------YNKLLSYCQVP 276 (1141)
Q Consensus 210 -----~~L~~L~Ls~N~L~~IP~~l~--~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls------~N~L~~~~~iP 276 (1141)
++|+.|+|++|+|+.||..++ .+++|+.|+|++|+|+++ |..+..+++|+.|+|+ +|++.+ .+|
T Consensus 483 ~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~i-p~~~~~l~~L~~L~Ls~N~~ls~N~l~~--~~p 559 (636)
T 4eco_A 483 NFKNTYLLTSIDLRFNKLTKLSDDFRATTLPYLVGIDLSYNSFSKF-PTQPLNSSTLKGFGIRNQRDAQGNRTLR--EWP 559 (636)
T ss_dssp ECTTGGGCCEEECCSSCCCBCCGGGSTTTCTTCCEEECCSSCCSSC-CCGGGGCSSCCEEECCSCBCTTCCBCCC--CCC
T ss_pred cccccCCccEEECcCCcCCccChhhhhccCCCcCEEECCCCCCCCc-ChhhhcCCCCCEEECCCCcccccCcccc--cCh
Confidence 145555555555555555544 455555555555555552 3344455555555552 333333 345
Q ss_pred hhhhhcccCCCCCCCCCCc
Q 001143 277 SWICCNLEGNGKDSSNDDF 295 (1141)
Q Consensus 277 ~~~~~~l~~~~l~~~~n~l 295 (1141)
..+.....+..+++++|.+
T Consensus 560 ~~l~~l~~L~~L~Ls~N~l 578 (636)
T 4eco_A 560 EGITLCPSLTQLQIGSNDI 578 (636)
T ss_dssp TTGGGCSSCCEEECCSSCC
T ss_pred HHHhcCCCCCEEECCCCcC
Confidence 5555444555555555554
No 266
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=6.3e-28 Score=275.59 Aligned_cols=224 Identities=19% Similarity=0.176 Sum_probs=190.1
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEE
Q 001143 40 DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECL 119 (1141)
Q Consensus 40 l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L 119 (1141)
...++.|+|++|+|+. +|..++.+ ++|++|+|++|.|+.+|..|.++++|++|+|++|+|+.+|..|+++++|++|
T Consensus 80 ~~~l~~L~L~~n~l~~-lp~~l~~l---~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L 155 (328)
T 4fcg_A 80 QPGRVALELRSVPLPQ-FPDQAFRL---SHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPASIASLNRLREL 155 (328)
T ss_dssp STTCCEEEEESSCCSS-CCSCGGGG---TTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEE
T ss_pred ccceeEEEccCCCchh-cChhhhhC---CCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEE
Confidence 4689999999999994 55555544 8999999999999999999999999999999999999999999999999999
Q ss_pred EccCCC-CCCCcccccC---------CCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCC
Q 001143 120 QIKISS-PGVNGFALNK---------LKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNL 189 (1141)
Q Consensus 120 ~Ls~N~-l~~~~~~~~~---------L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L 189 (1141)
+|++|+ ++.+|..+.. +++|++|+|++|.+. .+|..+..+++|+.|+|++|+++.+|..++.+++|
T Consensus 156 ~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~----~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L 231 (328)
T 4fcg_A 156 SIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR----SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKL 231 (328)
T ss_dssp EEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC----CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTC
T ss_pred ECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC----cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCC
Confidence 999966 7777776554 888888888886554 66777888888888888888888888888888888
Q ss_pred CEEEccCCccc-cccccccCCCCCCEEEccCCCCC-cCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCC
Q 001143 190 EQLDLSFNKMK-YLPTEICYLKALISLKVANNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1141)
Q Consensus 190 ~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N 267 (1141)
+.|+|++|++. .+|..++.+++|+.|+|++|++. .+|..+.++++|+.|+|++|++.+.+|..+..|++|+.+++..|
T Consensus 232 ~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~ 311 (328)
T 4fcg_A 232 EELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPH 311 (328)
T ss_dssp CEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGG
T ss_pred CEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHH
Confidence 88888888776 77888888888888888887665 77888888888888888888888888888888888888888888
Q ss_pred cCCC
Q 001143 268 KLLS 271 (1141)
Q Consensus 268 ~L~~ 271 (1141)
.+..
T Consensus 312 ~~~~ 315 (328)
T 4fcg_A 312 LQAQ 315 (328)
T ss_dssp GSCC
T ss_pred HHHH
Confidence 7665
No 267
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=2.3e-28 Score=311.47 Aligned_cols=271 Identities=16% Similarity=0.154 Sum_probs=187.6
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCC-CCC-CCcccccCC----CCCCCccEEEeecCCCCccCc--ccc
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKT-VDF-PLIESYGNR----GGDNSVEGLYLYKNVLNLIPK--SVG 88 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~-Ls~-~~p~~~~~l----~~L~~L~~L~Ls~N~Lt~iP~--~l~ 88 (1141)
++++.|.+..|++....+..|.++++|+.|+|++|+ |++ .+|..++.+ ..+++|++|+|++|.|+.||. .|.
T Consensus 491 ~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~ 570 (876)
T 4ecn_A 491 KDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQ 570 (876)
T ss_dssp TTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHT
T ss_pred CCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhh
Confidence 478899999999888888999999999999999998 988 777766533 355689999999999999988 889
Q ss_pred CCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCC-CCEEECCCCCCCCCcccchhhhcCCC---
Q 001143 89 RYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKG-LKELELSKVPPRPSVLTLLSEIAGLK--- 164 (1141)
Q Consensus 89 ~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~-L~~L~Ls~N~ln~~~~~lp~~l~~L~--- 164 (1141)
++++|+.|+|++|+|+.|| .|+++++|+.|+|++|.+..+|..+..+++ |+.|+|++|.+. .+|..+..+.
T Consensus 571 ~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~L~Ls~N~l~~lp~~l~~l~~~L~~L~Ls~N~L~----~lp~~~~~~~~~~ 645 (876)
T 4ecn_A 571 KMVKLGLLDCVHNKVRHLE-AFGTNVKLTDLKLDYNQIEEIPEDFCAFTDQVEGLGFSHNKLK----YIPNIFNAKSVYV 645 (876)
T ss_dssp TCTTCCEEECTTSCCCBCC-CCCTTSEESEEECCSSCCSCCCTTSCEECTTCCEEECCSSCCC----SCCSCCCTTCSSC
T ss_pred cCCCCCEEECCCCCcccch-hhcCCCcceEEECcCCccccchHHHhhccccCCEEECcCCCCC----cCchhhhccccCC
Confidence 9999999999999999888 888889999999998888888888888888 888888887654 3344443332
Q ss_pred ----------------------------CCcEEEccCCCCCccCccc-cCCCCCCEEEccCCccccccccccCC------
Q 001143 165 ----------------------------CLTKLSVCHFSIRYLPPEI-GCLSNLEQLDLSFNKMKYLPTEICYL------ 209 (1141)
Q Consensus 165 ----------------------------~L~~L~Ls~N~L~~iP~~l-~~l~~L~~L~Ls~N~L~~iP~~l~~l------ 209 (1141)
+|+.|+|++|+|+.+|..+ ..+++|+.|+|++|+|+.+|..+...
T Consensus 646 L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~ 725 (876)
T 4ecn_A 646 MGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYK 725 (876)
T ss_dssp EEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCT
T ss_pred CCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhcccccccc
Confidence 4455555555555555443 24555566666666555555443332
Q ss_pred --CCCCEEEccCCCCCcCCcCcc--CCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccC------CcCCCCCCCchhh
Q 001143 210 --KALISLKVANNKLVELPSGLY--LLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQY------NKLLSYCQVPSWI 279 (1141)
Q Consensus 210 --~~L~~L~Ls~N~L~~IP~~l~--~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~------N~L~~~~~iP~~~ 279 (1141)
++|+.|+|++|+|+.||..++ .+++|+.|+|++|+|+++ |..+..+++|+.|+|++ |++.+ .+|..+
T Consensus 726 nl~~L~~L~Ls~N~L~~lp~~l~~~~l~~L~~L~Ls~N~L~~l-p~~l~~L~~L~~L~Ls~N~~ls~N~l~~--~ip~~l 802 (876)
T 4ecn_A 726 NTYLLTTIDLRFNKLTSLSDDFRATTLPYLSNMDVSYNCFSSF-PTQPLNSSQLKAFGIRHQRDAEGNRILR--QWPTGI 802 (876)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGSTTTCTTCCEEECCSSCCSSC-CCGGGGCTTCCEEECCCCBCTTCCBCCC--CCCTTG
T ss_pred ccCCccEEECCCCCCccchHHhhhccCCCcCEEEeCCCCCCcc-chhhhcCCCCCEEECCCCCCcccccccc--cChHHH
Confidence 256666666666665555555 556666666666666653 33555566666666544 34443 355555
Q ss_pred hhcccCCCCCCCCCCc
Q 001143 280 CCNLEGNGKDSSNDDF 295 (1141)
Q Consensus 280 ~~~l~~~~l~~~~n~l 295 (1141)
..+..+..+++++|.+
T Consensus 803 ~~L~~L~~L~Ls~N~L 818 (876)
T 4ecn_A 803 TTCPSLIQLQIGSNDI 818 (876)
T ss_dssp GGCSSCCEEECCSSCC
T ss_pred hcCCCCCEEECCCCCC
Confidence 5555555555555555
No 268
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.95 E-value=1.6e-28 Score=304.96 Aligned_cols=270 Identities=17% Similarity=0.173 Sum_probs=228.7
Q ss_pred CCcccccCCCCCcccc-----------------CCCCCC--CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeec
Q 001143 17 PIKEKLPSEANKINNE-----------------KNGSVN--DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYK 77 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i-----------------~~~~f~--~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~ 77 (1141)
+.++.|.+..|+|++. -+..+. ++++|++|+|++|++.+.+|..++.+ ++|++|+|++
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l---~~L~~L~Ls~ 282 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL---PEMQLINVAC 282 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC---SSCCEEECTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC---CCCCEEECcC
Confidence 4788899999999994 567777 99999999999999999999776554 9999999999
Q ss_pred CC-CC--ccCccccCC------cCCcEEEccCCCCCcCch--hhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECC
Q 001143 78 NV-LN--LIPKSVGRY------EKLRNLKFFGNEINLFPS--EVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELS 145 (1141)
Q Consensus 78 N~-Lt--~iP~~l~~L------~~L~~L~Ls~N~L~~lP~--~~~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls 145 (1141)
|+ |+ .+|..++++ ++|++|+|++|+|+.+|. .|+++++|+.|+|++|.+. .+| .+..+++|++|+++
T Consensus 283 n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~ 361 (636)
T 4eco_A 283 NRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLASLNLA 361 (636)
T ss_dssp CTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEESEEECC
T ss_pred CCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCCEEECC
Confidence 98 88 489888876 899999999999999998 8999999999999999987 888 89999999999999
Q ss_pred CCCCCCCcccchhhhcCCCC-CcEEEccCCCCCccCccccCCC--CCCEEEccCCccc-ccccccc-------CCCCCCE
Q 001143 146 KVPPRPSVLTLLSEIAGLKC-LTKLSVCHFSIRYLPPEIGCLS--NLEQLDLSFNKMK-YLPTEIC-------YLKALIS 214 (1141)
Q Consensus 146 ~N~ln~~~~~lp~~l~~L~~-L~~L~Ls~N~L~~iP~~l~~l~--~L~~L~Ls~N~L~-~iP~~l~-------~l~~L~~ 214 (1141)
+|.+. .+|..+..+++ |+.|++++|+|+.+|..+..+. +|+.|+|++|+|+ .+|..+. .+++|+.
T Consensus 362 ~N~l~----~lp~~l~~l~~~L~~L~Ls~N~l~~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~ 437 (636)
T 4eco_A 362 YNQIT----EIPANFCGFTEQVENLSFAHNKLKYIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSS 437 (636)
T ss_dssp SSEEE----ECCTTSEEECTTCCEEECCSSCCSSCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEE
T ss_pred CCccc----cccHhhhhhcccCcEEEccCCcCcccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCE
Confidence 96543 78888999999 9999999999999998877655 8999999999988 5677777 7778888
Q ss_pred EEccCCCCCcCCcCccC-CCCCCEEeCCCCCCCCCCcccccCCC-------CCCEEEccCCcCCCCCCCchhhh--hccc
Q 001143 215 LKVANNKLVELPSGLYL-LQRLENLDLSNNRLTSLGSLDLCLMH-------NLQNLNLQYNKLLSYCQVPSWIC--CNLE 284 (1141)
Q Consensus 215 L~Ls~N~L~~IP~~l~~-L~~L~~L~Ls~N~Lt~~~p~~l~~L~-------~L~~L~Ls~N~L~~~~~iP~~~~--~~l~ 284 (1141)
|+|++|+|+.+|..++. +++|+.|+|++|+|+.+++..+..+. +|+.|+|++|+++. +|..+. .+..
T Consensus 438 L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~---lp~~~~~~~l~~ 514 (636)
T 4eco_A 438 INLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLTK---LSDDFRATTLPY 514 (636)
T ss_dssp EECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCCB---CCGGGSTTTCTT
T ss_pred EECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCCc---cChhhhhccCCC
Confidence 99999988888877654 88888888888888876665554433 88888888888885 787776 6677
Q ss_pred CCCCCCCCCCccc
Q 001143 285 GNGKDSSNDDFIS 297 (1141)
Q Consensus 285 ~~~l~~~~n~l~~ 297 (1141)
...+++++|.+.+
T Consensus 515 L~~L~Ls~N~l~~ 527 (636)
T 4eco_A 515 LVGIDLSYNSFSK 527 (636)
T ss_dssp CCEEECCSSCCSS
T ss_pred cCEEECCCCCCCC
Confidence 7778888887776
No 269
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.95 E-value=8.1e-28 Score=306.44 Aligned_cols=270 Identities=17% Similarity=0.169 Sum_probs=200.2
Q ss_pred CCcccccCCCCCcccc-----------------CCCCCC--CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeec
Q 001143 17 PIKEKLPSEANKINNE-----------------KNGSVN--DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYK 77 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i-----------------~~~~f~--~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~ 77 (1141)
++++.|.+..|+|++. -|..+. ++++|++|+|++|++.+.+|..++.+ ++|+.|+|++
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L---~~L~~L~Ls~ 524 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDL---PELQSLNIAC 524 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGC---SSCCEEECTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCC---CCCCEEECcC
Confidence 4789999999999991 345555 99999999999999999999887666 9999999999
Q ss_pred CC-CCc--cCccccCCc-------CCcEEEccCCCCCcCch--hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECC
Q 001143 78 NV-LNL--IPKSVGRYE-------KLRNLKFFGNEINLFPS--EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELS 145 (1141)
Q Consensus 78 N~-Lt~--iP~~l~~L~-------~L~~L~Ls~N~L~~lP~--~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls 145 (1141)
|+ |+. +|..|++++ +|+.|+|++|+|+.||. .|+++++|+.|+|++|.+..+| .+..+++|+.|+|+
T Consensus 525 N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~~lp-~~~~L~~L~~L~Ls 603 (876)
T 4ecn_A 525 NRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVRHLE-AFGTNVKLTDLKLD 603 (876)
T ss_dssp CTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCCBCC-CCCTTSEESEEECC
T ss_pred CCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEECCCCCcccch-hhcCCCcceEEECc
Confidence 98 884 898777665 99999999999999999 8999999999999999998888 89999999999999
Q ss_pred CCCCCCCcccchhhhcCCCC-CcEEEccCCCCCccCccccCCCC--CCEEEccCCccccc-c---cccc--CCCCCCEEE
Q 001143 146 KVPPRPSVLTLLSEIAGLKC-LTKLSVCHFSIRYLPPEIGCLSN--LEQLDLSFNKMKYL-P---TEIC--YLKALISLK 216 (1141)
Q Consensus 146 ~N~ln~~~~~lp~~l~~L~~-L~~L~Ls~N~L~~iP~~l~~l~~--L~~L~Ls~N~L~~i-P---~~l~--~l~~L~~L~ 216 (1141)
+|.+. .+|..+.++++ |+.|+|++|+|+.+|..+..++. |+.|+|++|+|+.. | ..+. .+++|+.|+
T Consensus 604 ~N~l~----~lp~~l~~l~~~L~~L~Ls~N~L~~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~ 679 (876)
T 4ecn_A 604 YNQIE----EIPEDFCAFTDQVEGLGFSHNKLKYIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVT 679 (876)
T ss_dssp SSCCS----CCCTTSCEECTTCCEEECCSSCCCSCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEE
T ss_pred CCccc----cchHHHhhccccCCEEECcCCCCCcCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEE
Confidence 97664 67888999999 99999999999999987766543 77777777766522 2 1222 223555666
Q ss_pred ccCCCCCcCCcCcc-CCCCCCEEeCCCCCCCCCCcccccCC-------CCCCEEEccCCcCCCCCCCchhhh--hcccCC
Q 001143 217 VANNKLVELPSGLY-LLQRLENLDLSNNRLTSLGSLDLCLM-------HNLQNLNLQYNKLLSYCQVPSWIC--CNLEGN 286 (1141)
Q Consensus 217 Ls~N~L~~IP~~l~-~L~~L~~L~Ls~N~Lt~~~p~~l~~L-------~~L~~L~Ls~N~L~~~~~iP~~~~--~~l~~~ 286 (1141)
|++|+|+.+|..++ .+++|+.|+|++|+|+.+++..+..+ ++|+.|+|++|+|+. +|..+. .+..+.
T Consensus 680 Ls~N~L~~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~~---lp~~l~~~~l~~L~ 756 (876)
T 4ecn_A 680 LSYNEIQKFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLTS---LSDDFRATTLPYLS 756 (876)
T ss_dssp CCSSCCCSCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCCC---CCGGGSTTTCTTCC
T ss_pred ccCCcCCccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCcc---chHHhhhccCCCcC
Confidence 66666655555544 45555555555555554444332221 155555555555553 555544 444455
Q ss_pred CCCCCCCCccc
Q 001143 287 GKDSSNDDFIS 297 (1141)
Q Consensus 287 ~l~~~~n~l~~ 297 (1141)
.+++++|.+.+
T Consensus 757 ~L~Ls~N~L~~ 767 (876)
T 4ecn_A 757 NMDVSYNCFSS 767 (876)
T ss_dssp EEECCSSCCSS
T ss_pred EEEeCCCCCCc
Confidence 55555555544
No 270
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=3e-27 Score=290.58 Aligned_cols=276 Identities=18% Similarity=0.161 Sum_probs=230.3
Q ss_pred CCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCC
Q 001143 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKL 93 (1141)
Q Consensus 15 ~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L 93 (1141)
-++.++.|.+..|+|+.+.+..|.++++|++|||++|+|++..|..|+. +++|++|+|++|+|+.+ |..|.++++|
T Consensus 31 l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~---l~~L~~L~Ls~n~l~~~~~~~~~~l~~L 107 (606)
T 3t6q_A 31 LPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQS---QHRLDTLVLTANPLIFMAETALSGPKAL 107 (606)
T ss_dssp SCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTT---CTTCCEEECTTCCCSEECTTTTSSCTTC
T ss_pred CCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccC---ccccCeeeCCCCcccccChhhhcccccc
Confidence 4557999999999999999999999999999999999999988877655 49999999999999976 6689999999
Q ss_pred cEEEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc--EE
Q 001143 94 RNLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT--KL 169 (1141)
Q Consensus 94 ~~L~Ls~N~L~~l-P~~~~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~--~L 169 (1141)
++|+|++|+|+.+ |..|+++++|++|+|++|.+..++ ..+..+++|++|++++|.+. ...|..|+.+++|+ .|
T Consensus 108 ~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~---~~~~~~~~~l~~L~~l~L 184 (606)
T 3t6q_A 108 KHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIH---YLSKEDMSSLQQATNLSL 184 (606)
T ss_dssp CEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCC---EECHHHHHTTTTCCSEEE
T ss_pred cEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCccc---ccChhhhhhhcccceeEE
Confidence 9999999999988 677999999999999999988764 45666999999999996654 44466788889998 89
Q ss_pred EccCCCCCccCccccCCC----------------------------------------------------CCCEEEccCC
Q 001143 170 SVCHFSIRYLPPEIGCLS----------------------------------------------------NLEQLDLSFN 197 (1141)
Q Consensus 170 ~Ls~N~L~~iP~~l~~l~----------------------------------------------------~L~~L~Ls~N 197 (1141)
++++|.++.+++...... +|+.|+|++|
T Consensus 185 ~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n 264 (606)
T 3t6q_A 185 NLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKH 264 (606)
T ss_dssp ECTTCCCCEECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTC
T ss_pred ecCCCccCccChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecC
Confidence 999999997654332222 5778888888
Q ss_pred ccccccc-cccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCc
Q 001143 198 KMKYLPT-EICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVP 276 (1141)
Q Consensus 198 ~L~~iP~-~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP 276 (1141)
.++.+|. .|..+++|+.|+|++|+++.+|..+..+++|+.|+|++|++++++|..+..+++|+.|++++|.+.+ .+|
T Consensus 265 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~--~~~ 342 (606)
T 3t6q_A 265 YFFNISSNTFHCFSGLQELDLTATHLSELPSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRL--ELG 342 (606)
T ss_dssp CCSSCCTTTTTTCTTCSEEECTTSCCSCCCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCC--BCC
T ss_pred ccCccCHHHhccccCCCEEeccCCccCCCChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCccc--ccc
Confidence 8887754 4888899999999999999999889889999999999999998888888899999999999998875 354
Q ss_pred hh-hhhcccCCCCCCCCCCcccC
Q 001143 277 SW-ICCNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 277 ~~-~~~~l~~~~l~~~~n~l~~~ 298 (1141)
.. +........++++.|.+.+.
T Consensus 343 ~~~~~~l~~L~~L~l~~n~l~~~ 365 (606)
T 3t6q_A 343 TGCLENLENLRELDLSHDDIETS 365 (606)
T ss_dssp SSTTTTCTTCCEEECCSSCCCEE
T ss_pred hhhhhccCcCCEEECCCCccccc
Confidence 43 55556666777777766543
No 271
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=2.1e-27 Score=292.64 Aligned_cols=267 Identities=18% Similarity=0.165 Sum_probs=165.8
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNL 96 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~L 96 (1141)
.+..|.+..|+|+.+.+..|.++++|++|+|++|.|++.+|..|+.+ ++|++|+|++|.|+.+|.. |.++++|++|
T Consensus 76 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 152 (597)
T 3oja_B 76 QVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNV---PLLTVLVLERNDLSSLPRGIFHNTPKLTTL 152 (597)
T ss_dssp CCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC---TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCC---CCCCEEEeeCCCCCCCCHHHhccCCCCCEE
Confidence 46666666666666666666666666666666666666665544333 6666666666666666554 4566666666
Q ss_pred EccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCC---------------cccchhhh
Q 001143 97 KFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPS---------------VLTLLSEI 160 (1141)
Q Consensus 97 ~Ls~N~L~~l-P~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~---------------~~~lp~~l 160 (1141)
+|++|.|+.+ |..|+++++|+.|+|++|.++.++ +..+++|+.|++++|.+..+ +..+|..+
T Consensus 153 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~ 230 (597)
T 3oja_B 153 SMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPV 230 (597)
T ss_dssp ECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC--GGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSC
T ss_pred EeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC--hhhhhhhhhhhcccCccccccCCchhheeeccCCccccccccc
Confidence 6666666654 334666666666666666655443 33444444444444333211 00111111
Q ss_pred cCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEe
Q 001143 161 AGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGLYLLQRLENLD 239 (1141)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~ 239 (1141)
.++|+.|+|++|.++.+ ..++.+++|+.|+|++|.|+.+ |..|+.+++|+.|+|++|+|+.+|..+..+++|+.|+
T Consensus 231 --~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~ 307 (597)
T 3oja_B 231 --NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLD 307 (597)
T ss_dssp --CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEE
T ss_pred --CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEE
Confidence 13566666666666653 4566777777777777777744 6677777777777777777777777777777777777
Q ss_pred CCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccC
Q 001143 240 LSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 240 Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~ 298 (1141)
|++|+|+++++ .+..+++|+.|+|++|+|++ +| +..+..+..+++++|.+.|.
T Consensus 308 Ls~N~l~~i~~-~~~~l~~L~~L~L~~N~l~~---~~--~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 308 LSHNHLLHVER-NQPQFDRLENLYLDHNSIVT---LK--LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CCSSCCCCCGG-GHHHHTTCSEEECCSSCCCC---CC--CCTTCCCSEEECCSSCEEHH
T ss_pred CCCCCCCccCc-ccccCCCCCEEECCCCCCCC---cC--hhhcCCCCEEEeeCCCCCCh
Confidence 77777776544 56777777777777777766 33 33344556666777776654
No 272
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.95 E-value=1.3e-27 Score=278.39 Aligned_cols=272 Identities=17% Similarity=0.165 Sum_probs=229.1
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRN 95 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~ 95 (1141)
+++..+.+..|.|+.++...|.++++|++|+|++|.|++..+..|+. +++|++|+|++|.|+.+|+ .|.++++|++
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 121 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAY---AHTIQKLYMGFNAIRYLPPHVFQNVPLLTV 121 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTT---CTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccC---CCCcCEEECCCCCCCcCCHHHhcCCCCCCE
Confidence 46788889999999999999999999999999999999888766654 5999999999999998864 5899999999
Q ss_pred EEccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhh-------------h
Q 001143 96 LKFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSE-------------I 160 (1141)
Q Consensus 96 L~Ls~N~L~~lP~~-~~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~-------------l 160 (1141)
|+|++|+|+.+|.. |.++++|++|+|++|.+..++ ..+..+++|++|++++|.+.......... +
T Consensus 122 L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 122 LVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp EECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE
T ss_pred EECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccccc
Confidence 99999999999877 589999999999999977765 56999999999999998775442111101 1
Q ss_pred cCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEe
Q 001143 161 AGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLD 239 (1141)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~ 239 (1141)
...++|+.|++++|.++.+|.. .+++|+.|+|++|.|+.+ ..+..+++|+.|+|++|.|+.+ |..+..+++|+.|+
T Consensus 202 ~~~~~L~~L~l~~n~l~~~~~~--~~~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 278 (390)
T 3o6n_A 202 AIPIAVEELDASHNSINVVRGP--VNVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLY 278 (390)
T ss_dssp ECCSSCSEEECCSSCCCEEECC--CCSSCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEE
T ss_pred CCCCcceEEECCCCeeeecccc--ccccccEEECCCCCCccc-HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEE
Confidence 2224566666677776666543 357899999999999987 4789999999999999999966 88899999999999
Q ss_pred CCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccC
Q 001143 240 LSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 240 Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~ 298 (1141)
|++|+|++++. .+..+++|+.|+|++|+++. +|..+..+.....+++.+|.+...
T Consensus 279 L~~n~l~~~~~-~~~~l~~L~~L~L~~n~l~~---~~~~~~~l~~L~~L~L~~N~i~~~ 333 (390)
T 3o6n_A 279 ISNNRLVALNL-YGQPIPTLKVLDLSHNHLLH---VERNQPQFDRLENLYLDHNSIVTL 333 (390)
T ss_dssp CCSSCCCEEEC-SSSCCTTCCEEECCSSCCCC---CGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CCCCcCcccCc-ccCCCCCCCEEECCCCccee---cCccccccCcCCEEECCCCcccee
Confidence 99999999754 67889999999999999986 888888888888899998887654
No 273
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1.1e-27 Score=273.55 Aligned_cols=223 Identities=22% Similarity=0.213 Sum_probs=204.9
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N 147 (1141)
.+++.|+|++|.|+.||..++++++|++|+|++|.|+.+|..|+++++|++|+|++|.+..+|..+..+++|++|+|++|
T Consensus 81 ~~l~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~n~l~~lp~~~~~l~~L~~L~Ls~n~l~~lp~~l~~l~~L~~L~L~~n 160 (328)
T 4fcg_A 81 PGRVALELRSVPLPQFPDQAFRLSHLQHMTIDAAGLMELPDTMQQFAGLETLTLARNPLRALPASIASLNRLRELSIRAC 160 (328)
T ss_dssp TTCCEEEEESSCCSSCCSCGGGGTTCSEEEEESSCCCCCCSCGGGGTTCSEEEEESCCCCCCCGGGGGCTTCCEEEEEEE
T ss_pred cceeEEEccCCCchhcChhhhhCCCCCEEECCCCCccchhHHHhccCCCCEEECCCCccccCcHHHhcCcCCCEEECCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999994
Q ss_pred CCCCCcccchhhhc---------CCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEcc
Q 001143 148 PPRPSVLTLLSEIA---------GLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVA 218 (1141)
Q Consensus 148 ~ln~~~~~lp~~l~---------~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls 218 (1141)
+..+.+|..+. ++++|+.|+|++|+|+.+|..++.+++|+.|+|++|+|+.+|..++.+++|+.|+|+
T Consensus 161 ---~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls 237 (328)
T 4fcg_A 161 ---PELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIRSLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLR 237 (328)
T ss_dssp ---TTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCCCCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECT
T ss_pred ---CCccccChhHhhccchhhhccCCCCCEEECcCCCcCcchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECc
Confidence 44556666554 499999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCC-cCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCc
Q 001143 219 NNKLV-ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDF 295 (1141)
Q Consensus 219 ~N~L~-~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l 295 (1141)
+|++. .+|..++.+++|+.|+|++|++.+.+|..+..+++|+.|+|++|++.+ .+|.++..+.....+.+..+.+
T Consensus 238 ~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~--~iP~~l~~L~~L~~l~l~~~~~ 313 (328)
T 4fcg_A 238 GCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLS--RLPSLIAQLPANCIILVPPHLQ 313 (328)
T ss_dssp TCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCC--CCCGGGGGSCTTCEEECCGGGS
T ss_pred CCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchh--hccHHHhhccCceEEeCCHHHH
Confidence 99886 789999999999999999999999999999999999999999999988 6999998877776666554433
No 274
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=1.4e-27 Score=288.32 Aligned_cols=268 Identities=18% Similarity=0.136 Sum_probs=193.6
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1141)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..|..|+.+ ++|++|+|++|+|+.||.. .+++|++|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~lp~~--~l~~L~~L 95 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFN---QELEYLDLSHNKLVKISCH--PTVNLKHL 95 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTC---TTCCEEECCSSCCCEEECC--CCCCCSEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcc---cCCCEEecCCCceeecCcc--ccCCccEE
Confidence 589999999999999999999999999999999999999888777555 9999999999999999877 89999999
Q ss_pred EccCCCCCc--CchhhcCCCCCCEEEccCCCCCCCcccccCCCCC--CEEECCCCCC-----------------------
Q 001143 97 KFFGNEINL--FPSEVGNLLGLECLQIKISSPGVNGFALNKLKGL--KELELSKVPP----------------------- 149 (1141)
Q Consensus 97 ~Ls~N~L~~--lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L--~~L~Ls~N~l----------------------- 149 (1141)
+|++|+|+. +|..|+++++|++|+|++|.+.. ..+..+++| ++|++++|.+
T Consensus 96 ~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~--~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~ 173 (520)
T 2z7x_B 96 DLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK--SSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFP 173 (520)
T ss_dssp ECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG--GGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECC
T ss_pred eccCCccccccchhhhccCCcceEEEecCcccch--hhccccccceeeEEEeecccccccccccccccccccceEEEEec
Confidence 999999985 57899999999999999988653 223334444 4444444332
Q ss_pred --------------------------------------------------------------------------------
Q 001143 150 -------------------------------------------------------------------------------- 149 (1141)
Q Consensus 150 -------------------------------------------------------------------------------- 149 (1141)
T Consensus 174 ~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~ 253 (520)
T 2z7x_B 174 TNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFS 253 (520)
T ss_dssp SSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEE
T ss_pred cCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEE
Confidence
Q ss_pred ---CCCcccchhhh-----------------------------------------------------cCCCCCcEEEccC
Q 001143 150 ---RPSVLTLLSEI-----------------------------------------------------AGLKCLTKLSVCH 173 (1141)
Q Consensus 150 ---n~~~~~lp~~l-----------------------------------------------------~~L~~L~~L~Ls~ 173 (1141)
+.+.+.+|..+ ..+++|+.|++++
T Consensus 254 l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~~~p~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~l~~L~~L~Ls~ 333 (520)
T 2z7x_B 254 ISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVFGFPQSYIYEIFSNMNIKNFTVSGTRMVHMLCPSKISPFLHLDFSN 333 (520)
T ss_dssp EEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCCCSCTHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCS
T ss_pred eecccccCccccchhhcccccCceeEeccccccceecchhhhhcccccCceeEEEcCCCccccccchhhCCcccEEEeEC
Confidence 00111222222 4556666777777
Q ss_pred CCCCc-cCccccCCCCCCEEEccCCcccc---ccccccCCCCCCEEEccCCCCCc-CCcC-ccCCCCCCEEeCCCCCCCC
Q 001143 174 FSIRY-LPPEIGCLSNLEQLDLSFNKMKY---LPTEICYLKALISLKVANNKLVE-LPSG-LYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 174 N~L~~-iP~~l~~l~~L~~L~Ls~N~L~~---iP~~l~~l~~L~~L~Ls~N~L~~-IP~~-l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
|+++. +|..++.+++|++|+|++|+|+. +|..++.+++|+.|+|++|+++. +|.. +..+++|+.|+|++|+|++
T Consensus 334 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~ 413 (520)
T 2z7x_B 334 NLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTD 413 (520)
T ss_dssp SCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCG
T ss_pred CccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCc
Confidence 77664 56666667777777777777763 34556667777777777777765 6654 5556677777777777766
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcc
Q 001143 248 LGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFI 296 (1141)
Q Consensus 248 ~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~ 296 (1141)
..|..+. ++|+.|+|++|+++. +|..+........+++.+|.+.
T Consensus 414 ~~~~~l~--~~L~~L~Ls~N~l~~---ip~~~~~l~~L~~L~L~~N~l~ 457 (520)
T 2z7x_B 414 TIFRCLP--PRIKVLDLHSNKIKS---IPKQVVKLEALQELNVASNQLK 457 (520)
T ss_dssp GGGGSCC--TTCCEEECCSSCCCC---CCGGGGGCTTCCEEECCSSCCC
T ss_pred chhhhhc--ccCCEEECCCCcccc---cchhhhcCCCCCEEECCCCcCC
Confidence 5554432 577777777777764 7776666666777777777666
No 275
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=3.2e-27 Score=288.52 Aligned_cols=270 Identities=19% Similarity=0.136 Sum_probs=198.3
Q ss_pred CCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001143 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1141)
Q Consensus 16 ~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1141)
++.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..|..|+. +++|++|+|++|+|+.||.. .+++|++
T Consensus 51 ~~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~---l~~L~~L~Ls~N~l~~lp~~--~l~~L~~ 125 (562)
T 3a79_B 51 PPRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLF---NQDLEYLDVSHNRLQNISCC--PMASLRH 125 (562)
T ss_dssp CTTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTT---CTTCCEEECTTSCCCEECSC--CCTTCSE
T ss_pred CCCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCC---CCCCCEEECCCCcCCccCcc--ccccCCE
Confidence 358999999999999999999999999999999999999988876654 49999999999999999987 8999999
Q ss_pred EEccCCCCCcC--chhhcCCCCCCEEEccCCCCCCCcccccCCCCC--CEEECCCCCC--CC------------------
Q 001143 96 LKFFGNEINLF--PSEVGNLLGLECLQIKISSPGVNGFALNKLKGL--KELELSKVPP--RP------------------ 151 (1141)
Q Consensus 96 L~Ls~N~L~~l--P~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L--~~L~Ls~N~l--n~------------------ 151 (1141)
|+|++|+|+.+ |..|+++++|++|+|++|.+... .+..+++| ++|++++|.+ ..
T Consensus 126 L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l 203 (562)
T 3a79_B 126 LDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--DLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVF 203 (562)
T ss_dssp EECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--TTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEE
T ss_pred EECCCCCccccCchHhhcccCcccEEecCCCccccC--chhhhhhceeeEEEeecccccccccCcccccccCcceEEEEe
Confidence 99999999976 47899999999999999986642 34444444 6666665544 10
Q ss_pred --------------------------------------------------------------------------------
Q 001143 152 -------------------------------------------------------------------------------- 151 (1141)
Q Consensus 152 -------------------------------------------------------------------------------- 151 (1141)
T Consensus 204 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l 283 (562)
T 3a79_B 204 HPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNI 283 (562)
T ss_dssp CSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEE
T ss_pred cCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEE
Confidence
Q ss_pred ----Ccccchhhh-----------------------------------------------------cCCCCCcEEEccCC
Q 001143 152 ----SVLTLLSEI-----------------------------------------------------AGLKCLTKLSVCHF 174 (1141)
Q Consensus 152 ----~~~~lp~~l-----------------------------------------------------~~L~~L~~L~Ls~N 174 (1141)
+.+.+|..+ ..+++|+.|++++|
T Consensus 284 ~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~l~~L~~L~l~~n 363 (562)
T 3a79_B 284 YNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMVCPPSPSSFTFLNFTQN 363 (562)
T ss_dssp EEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCCCCSSCCCCCEEECCSS
T ss_pred eccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCcccccCccCCCCceEEECCCC
Confidence 001223222 45666777777777
Q ss_pred CCCc-cCccccCCCCCCEEEccCCccccc---cccccCCCCCCEEEccCCCCCc-CCcC-ccCCCCCCEEeCCCCCCCCC
Q 001143 175 SIRY-LPPEIGCLSNLEQLDLSFNKMKYL---PTEICYLKALISLKVANNKLVE-LPSG-LYLLQRLENLDLSNNRLTSL 248 (1141)
Q Consensus 175 ~L~~-iP~~l~~l~~L~~L~Ls~N~L~~i---P~~l~~l~~L~~L~Ls~N~L~~-IP~~-l~~L~~L~~L~Ls~N~Lt~~ 248 (1141)
+++. +|..++.+++|++|+|++|+|+.+ |..+..+++|+.|+|++|+++. +|.. +..+++|+.|+|++|+|++.
T Consensus 364 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 443 (562)
T 3a79_B 364 VFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGS 443 (562)
T ss_dssp CCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGG
T ss_pred ccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcc
Confidence 7774 566667777777777777777744 3456677777777777777764 6654 45567777777777777665
Q ss_pred CcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCccc
Q 001143 249 GSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFIS 297 (1141)
Q Consensus 249 ~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~ 297 (1141)
.|..+. ++|+.|+|++|+++. ||..+........+++++|.+..
T Consensus 444 ~~~~l~--~~L~~L~L~~N~l~~---ip~~~~~l~~L~~L~L~~N~l~~ 487 (562)
T 3a79_B 444 VFRCLP--PKVKVLDLHNNRIMS---IPKDVTHLQALQELNVASNQLKS 487 (562)
T ss_dssp GGSSCC--TTCSEEECCSSCCCC---CCTTTTSSCCCSEEECCSSCCCC
T ss_pred hhhhhc--CcCCEEECCCCcCcc---cChhhcCCCCCCEEECCCCCCCC
Confidence 553332 577777777777764 77766666666777777777663
No 276
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.95 E-value=2.6e-27 Score=285.88 Aligned_cols=82 Identities=16% Similarity=0.111 Sum_probs=61.6
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCc--cCccccCCcCCc
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNL--IPKSVGRYEKLR 94 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~--iP~~l~~L~~L~ 94 (1141)
+.++.|.+..|+|+.+.+..|.++++|++|||++|+|+. +|.. .+++|++|+|++|.|+. +|..|.++++|+
T Consensus 45 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~-----~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~ 118 (520)
T 2z7x_B 45 SKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH-----PTVNLKHLDLSFNAFDALPICKEFGNMSQLK 118 (520)
T ss_dssp TTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC-----CCCCCSEEECCSSCCSSCCCCGGGGGCTTCC
T ss_pred ccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc-----ccCCccEEeccCCccccccchhhhccCCcce
Confidence 368888888888888888888888888888888888874 3432 34778888888888775 456777777777
Q ss_pred EEEccCCCCC
Q 001143 95 NLKFFGNEIN 104 (1141)
Q Consensus 95 ~L~Ls~N~L~ 104 (1141)
+|+|++|.|+
T Consensus 119 ~L~L~~n~l~ 128 (520)
T 2z7x_B 119 FLGLSTTHLE 128 (520)
T ss_dssp EEEEEESSCC
T ss_pred EEEecCcccc
Confidence 7777777653
No 277
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=5.4e-27 Score=261.33 Aligned_cols=247 Identities=20% Similarity=0.210 Sum_probs=204.0
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcC-chhhcCCCCCCEEE
Q 001143 43 DSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLF-PSEVGNLLGLECLQ 120 (1141)
Q Consensus 43 L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~l-P~~~~~L~~L~~L~ 120 (1141)
.+++++++++++.++.. + .++|++|+|++|.|+.+|. .|.++++|++|+|++|.|+.+ |..|.++++|++|+
T Consensus 13 ~~~~~c~~~~l~~ip~~-~-----~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 86 (285)
T 1ozn_A 13 KVTTSCPQQGLQAVPVG-I-----PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLD 86 (285)
T ss_dssp SCEEECCSSCCSSCCTT-C-----CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CeEEEcCcCCcccCCcC-C-----CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEe
Confidence 36788888888865432 1 2678888888888888764 588888888888888888866 66788888888888
Q ss_pred ccCCC-CCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-cccCCCCCCEEEccCC
Q 001143 121 IKISS-PGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFN 197 (1141)
Q Consensus 121 Ls~N~-l~~~-~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N 197 (1141)
|++|. ++.+ +..+..+++|++|++++|.+.. ..|..|.++++|+.|++++|+++.+|. .+..+++|+.|+|++|
T Consensus 87 l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~---~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 163 (285)
T 1ozn_A 87 LSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQE---LGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGN 163 (285)
T ss_dssp CCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCC---CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCCCCccccCHHHhcCCcCCCEEECCCCcCCE---ECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCC
Confidence 88886 7766 5678888899999999866543 335678889999999999999998876 4789999999999999
Q ss_pred ccccccc-cccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCC
Q 001143 198 KMKYLPT-EICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQV 275 (1141)
Q Consensus 198 ~L~~iP~-~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~i 275 (1141)
+|+.+|. .+..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+++++..+..+++|+.|+|++|+|.|.|++
T Consensus 164 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 164 RISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred cccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 9998875 588999999999999999966 88899999999999999999999998899999999999999999998887
Q ss_pred chhhhhcccCCCCCCCCCCcccCccc
Q 001143 276 PSWICCNLEGNGKDSSNDDFISSSAE 301 (1141)
Q Consensus 276 P~~~~~~l~~~~l~~~~n~l~~~~~~ 301 (1141)
.+...|..... ...+.+.|..|.
T Consensus 244 ~~~~~~l~~~~---~~~~~~~c~~p~ 266 (285)
T 1ozn_A 244 RPLWAWLQKFR---GSSSEVPCSLPQ 266 (285)
T ss_dssp HHHHHHHHHCC---SEECCCBEEESG
T ss_pred HHHHHHHHhcc---cccCccccCCch
Confidence 76555544332 445666666654
No 278
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.95 E-value=1.4e-26 Score=263.53 Aligned_cols=242 Identities=19% Similarity=0.230 Sum_probs=211.3
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNL 96 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L 96 (1141)
.+..+.+..+.++.++.... ++|++|+|++|+|++..+..|+. +++|++|+|++|.|+.+ |..|.++++|++|
T Consensus 32 ~l~~l~~~~~~l~~lp~~~~---~~l~~L~L~~n~i~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (330)
T 1xku_A 32 HLRVVQCSDLGLEKVPKDLP---PDTALLDLQNNKITEIKDGDFKN---LKNLHTLILINNKISKISPGAFAPLVKLERL 105 (330)
T ss_dssp ETTEEECTTSCCCSCCCSCC---TTCCEEECCSSCCCCBCTTTTTT---CTTCCEEECCSSCCCCBCTTTTTTCTTCCEE
T ss_pred CCeEEEecCCCccccCccCC---CCCeEEECCCCcCCEeChhhhcc---CCCCCEEECCCCcCCeeCHHHhcCCCCCCEE
Confidence 46677888888988875443 68999999999999988766654 49999999999999987 7789999999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001143 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1141)
Q Consensus 97 ~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1141)
+|++|+|+.+|..+. ++|+.|++++|.++.++. .+..+++|++|++++|.+.. .+..+..+.++++|+.|++++|.
T Consensus 106 ~Ls~n~l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 106 YLSKNQLKELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKS-SGIENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp ECCSSCCSBCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCG-GGBCTTGGGGCTTCCEEECCSSC
T ss_pred ECCCCcCCccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCc-cCcChhhccCCCCcCEEECCCCc
Confidence 999999999998775 899999999999887764 68999999999999977632 33556788999999999999999
Q ss_pred CCccCccccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCC-cCccCCCCCCEEeCCCCCCCCCCcccc
Q 001143 176 IRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELP-SGLYLLQRLENLDLSNNRLTSLGSLDL 253 (1141)
Q Consensus 176 L~~iP~~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP-~~l~~L~~L~~L~Ls~N~Lt~~~p~~l 253 (1141)
++.+|..+. ++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+.++ ..+..+++|+.|+|++|+|+.++. .+
T Consensus 183 l~~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~l 259 (330)
T 1xku_A 183 ITTIPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPG-GL 259 (330)
T ss_dssp CCSCCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCSSCCT-TT
T ss_pred cccCCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCccCCh-hh
Confidence 999988664 8999999999999966 678999999999999999999775 478889999999999999997654 78
Q ss_pred cCCCCCCEEEccCCcCCC
Q 001143 254 CLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 254 ~~L~~L~~L~Ls~N~L~~ 271 (1141)
..+++|+.|+|++|+|++
T Consensus 260 ~~l~~L~~L~l~~N~i~~ 277 (330)
T 1xku_A 260 ADHKYIQVVYLHNNNISA 277 (330)
T ss_dssp TTCSSCCEEECCSSCCCC
T ss_pred ccCCCcCEEECCCCcCCc
Confidence 999999999999999987
No 279
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.95 E-value=5.6e-27 Score=286.40 Aligned_cols=82 Identities=21% Similarity=0.137 Sum_probs=70.9
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC--ccccCCcCCc
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP--KSVGRYEKLR 94 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP--~~l~~L~~L~ 94 (1141)
+.++.|.+..|+|+.+.+..|.++++|++|||++|+|+.. |.. .+++|++|+|++|+|+.+| ..|.++++|+
T Consensus 76 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l-p~~-----~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~ 149 (562)
T 3a79_B 76 SELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQNI-SCC-----PMASLRHLDLSFNDFDVLPVCKEFGNLTKLT 149 (562)
T ss_dssp TTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCCEE-CSC-----CCTTCSEEECCSSCCSBCCCCGGGGGCTTCC
T ss_pred CCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCCcc-Ccc-----ccccCCEEECCCCCccccCchHhhcccCccc
Confidence 4799999999999999999999999999999999999854 432 4589999999999998764 6788999999
Q ss_pred EEEccCCCCC
Q 001143 95 NLKFFGNEIN 104 (1141)
Q Consensus 95 ~L~Ls~N~L~ 104 (1141)
+|+|++|+|+
T Consensus 150 ~L~L~~n~l~ 159 (562)
T 3a79_B 150 FLGLSAAKFR 159 (562)
T ss_dssp EEEEECSBCC
T ss_pred EEecCCCccc
Confidence 9999888875
No 280
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.95 E-value=4.3e-27 Score=289.20 Aligned_cols=279 Identities=17% Similarity=0.128 Sum_probs=184.6
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRN 95 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~ 95 (1141)
+.+..|.+..|+|+.+.+..|.++++|++|||++|+|++..|..|+. +++|++|+|++|.|+.+ |..|.++++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~---l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~ 108 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHG---LHHLSNLILTGNPIQSFSPGSFSGLTSLEN 108 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTT---CTTCCEEECTTCCCCCCCTTSSTTCTTCCE
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhc---hhhcCEeECCCCcccccChhhcCCcccCCE
Confidence 45777777777777777777777777777777777777766655543 37777777777777765 556777777777
Q ss_pred EEccCCCCCcCc-hhhcCCCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCCCCCCccc-----------------
Q 001143 96 LKFFGNEINLFP-SEVGNLLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVPPRPSVLT----------------- 155 (1141)
Q Consensus 96 L~Ls~N~L~~lP-~~~~~L~~L~~L~Ls~N~l~~--~~~~~~~L~~L~~L~Ls~N~ln~~~~~----------------- 155 (1141)
|+|++|.|+.+| ..|+++++|++|+|++|.+.. +|..+.++++|++|++++|.+......
T Consensus 109 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l 188 (606)
T 3vq2_A 109 LVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDM 188 (606)
T ss_dssp EECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEEC
T ss_pred EEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeec
Confidence 777777776664 456777777777777777553 466677777777777666654321100
Q ss_pred --------------------------------------------------------------------------------
Q 001143 156 -------------------------------------------------------------------------------- 155 (1141)
Q Consensus 156 -------------------------------------------------------------------------------- 155 (1141)
T Consensus 189 ~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l 268 (606)
T 3vq2_A 189 SLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRL 268 (606)
T ss_dssp TTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEE
T ss_pred cCCCcceeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheec
Confidence
Q ss_pred -----------------------------------------------------c--------------------hhhhcC
Q 001143 156 -----------------------------------------------------L--------------------LSEIAG 162 (1141)
Q Consensus 156 -----------------------------------------------------l--------------------p~~l~~ 162 (1141)
+ +..+..
T Consensus 269 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~l~~l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~ 348 (606)
T 3vq2_A 269 TYTNDFSDDIVKFHCLANVSAMSLAGVSIKYLEDVPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVA 348 (606)
T ss_dssp CCCTTCCGGGGSCGGGTTCSEEEEESCCCCCCCCCCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCC
T ss_pred cccccccccccccccCCCCCEEEecCccchhhhhccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhcc
Confidence 0 001223
Q ss_pred CCCCcEEEccCCCCCcc---CccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCC--cCccCCCCCCE
Q 001143 163 LKCLTKLSVCHFSIRYL---PPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELP--SGLYLLQRLEN 237 (1141)
Q Consensus 163 L~~L~~L~Ls~N~L~~i---P~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP--~~l~~L~~L~~ 237 (1141)
+++|+.|++++|+++.+ |..+..+++|+.|+|++|.++.+|..+..+++|+.|+|++|+++.++ ..+..+++|+.
T Consensus 349 l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 428 (606)
T 3vq2_A 349 LPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLY 428 (606)
T ss_dssp CTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCE
T ss_pred CCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccCCccChhhhhccccCCE
Confidence 44556666666666543 55666777788888888887777777777777777777777777553 36667777777
Q ss_pred EeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCc
Q 001143 238 LDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSS 299 (1141)
Q Consensus 238 L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~ 299 (1141)
|+|++|++++.+|..+..+++|+.|++++|++++. .+|..+........+++++|.+.+..
T Consensus 429 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~~l~~L~~L~Ls~n~l~~~~ 489 (606)
T 3vq2_A 429 LDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDN-TLSNVFANTTNLTFLDLSKCQLEQIS 489 (606)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGG-EECSCCTTCTTCCEEECTTSCCCEEC
T ss_pred EECcCCCCCccchhhhcCCCCCCEEECCCCcCCCc-chHHhhccCCCCCEEECCCCcCCccC
Confidence 77777777777776777777777777777777651 14555555566666666666665543
No 281
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=3.7e-28 Score=279.36 Aligned_cols=244 Identities=18% Similarity=0.212 Sum_probs=138.2
Q ss_pred ccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEEccC
Q 001143 22 LPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLKFFG 100 (1141)
Q Consensus 22 L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~Ls~ 100 (1141)
.....|+++.++...+ ++|++|+|++|+|++..+..|. ++++|++|+|++|.|+.++ ..|.++++|++|+|++
T Consensus 36 c~~~~~~l~~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~---~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (353)
T 2z80_A 36 CKGSSGSLNSIPSGLT---EAVKSLDLSNNRITYISNSDLQ---RCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSY 109 (353)
T ss_dssp EECCSTTCSSCCTTCC---TTCCEEECTTSCCCEECTTTTT---TCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred eeCCCCCccccccccc---ccCcEEECCCCcCcccCHHHhc---cCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCC
Confidence 4444455555544322 2455555555555544443332 2255555555555555442 3355555555555555
Q ss_pred CCCCcCchh-hcCCCCCCEEEccCCCCCCCcc--cccCCCCCCEEECCCCCCCCCcccc-hhhhcCCCCCcEEEccCCCC
Q 001143 101 NEINLFPSE-VGNLLGLECLQIKISSPGVNGF--ALNKLKGLKELELSKVPPRPSVLTL-LSEIAGLKCLTKLSVCHFSI 176 (1141)
Q Consensus 101 N~L~~lP~~-~~~L~~L~~L~Ls~N~l~~~~~--~~~~L~~L~~L~Ls~N~ln~~~~~l-p~~l~~L~~L~~L~Ls~N~L 176 (1141)
|+|+.+|.. |.++++|++|+|++|.++.+|. .+..+++|++|++++|. ....+ +..|.++++|+.|++++|++
T Consensus 110 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~---~~~~~~~~~~~~l~~L~~L~l~~n~l 186 (353)
T 2z80_A 110 NYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMD---TFTKIQRKDFAGLTFLEELEIDASDL 186 (353)
T ss_dssp SCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESS---SCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCc---cccccCHHHccCCCCCCEEECCCCCc
Confidence 555555443 4555555555555555544443 44555555555555531 11122 23445555555555555555
Q ss_pred Ccc-CccccCCCCCCEEEccCCccccccccc-cCCCCCCEEEccCCCCCc------------------------------
Q 001143 177 RYL-PPEIGCLSNLEQLDLSFNKMKYLPTEI-CYLKALISLKVANNKLVE------------------------------ 224 (1141)
Q Consensus 177 ~~i-P~~l~~l~~L~~L~Ls~N~L~~iP~~l-~~l~~L~~L~Ls~N~L~~------------------------------ 224 (1141)
+.+ |..+..+++|+.|+|++|+++.+|..+ ..+++|+.|+|++|+++.
T Consensus 187 ~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l 266 (353)
T 2z80_A 187 QSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESL 266 (353)
T ss_dssp CEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHH
T ss_pred CccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcch
Confidence 533 444555555555555555555444332 234555555555555543
Q ss_pred --CCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001143 225 --LPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1141)
Q Consensus 225 --IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1141)
+|..+..+++|+.|+|++|+|+.+++..|..+++|+.|+|++|+|.|.|+
T Consensus 267 ~~l~~~l~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 267 FQVMKLLNQISGLLELEFSRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhhHHHHhcccCCCEEECCCCCCCccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 45667789999999999999998887667999999999999999999653
No 282
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.95 E-value=8.7e-27 Score=265.65 Aligned_cols=241 Identities=18% Similarity=0.235 Sum_probs=200.3
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNL 96 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L 96 (1141)
.+..+.+..++++.++...+ ++|++|+|++|+|++..+..|.. +++|++|+|++|.|+.+ |..|.++++|++|
T Consensus 34 ~l~~l~~~~~~l~~ip~~~~---~~l~~L~l~~n~i~~~~~~~~~~---l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 107 (332)
T 2ft3_A 34 HLRVVQCSDLGLKAVPKEIS---PDTTLLDLQNNDISELRKDDFKG---LQHLYALVLVNNKISKIHEKAFSPLRKLQKL 107 (332)
T ss_dssp ETTEEECCSSCCSSCCSCCC---TTCCEEECCSSCCCEECTTTTTT---CTTCCEEECCSSCCCEECGGGSTTCTTCCEE
T ss_pred cCCEEECCCCCccccCCCCC---CCCeEEECCCCcCCccCHhHhhC---CCCCcEEECCCCccCccCHhHhhCcCCCCEE
Confidence 36777888888888876543 68899999999999887766654 48999999999999977 6678999999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001143 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1141)
Q Consensus 97 ~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1141)
+|++|+|+.+|..+. ++|++|+|++|.++.++. .+..+++|++|++++|.+.. .+..|..+..+ +|+.|++++|+
T Consensus 108 ~L~~n~l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~~~l-~L~~L~l~~n~ 183 (332)
T 2ft3_A 108 YISKNHLVEIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN-SGFEPGAFDGL-KLNYLRISEAK 183 (332)
T ss_dssp ECCSSCCCSCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG-GGSCTTSSCSC-CCSCCBCCSSB
T ss_pred ECCCCcCCccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc-CCCCcccccCC-ccCEEECcCCC
Confidence 999999999988766 889999999999887775 58889999999999976532 23456677777 89999999999
Q ss_pred CCccCccccCCCCCCEEEccCCcccccc-ccccCCCCCCEEEccCCCCCcCCc-CccCCCCCCEEeCCCCCCCCCCcccc
Q 001143 176 IRYLPPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDL 253 (1141)
Q Consensus 176 L~~iP~~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lt~~~p~~l 253 (1141)
++.+|..+. ++|+.|+|++|.|+.++ ..+..+++|+.|+|++|+|+.++. .+..+++|+.|+|++|+|+.+++ .+
T Consensus 184 l~~l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~lp~-~l 260 (332)
T 2ft3_A 184 LTGIPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLSRVPA-GL 260 (332)
T ss_dssp CSSCCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCCBCCT-TG
T ss_pred CCccCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCeecCh-hh
Confidence 999888654 78999999999999765 678889999999999999997754 68889999999999999996654 68
Q ss_pred cCCCCCCEEEccCCcCCC
Q 001143 254 CLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 254 ~~L~~L~~L~Ls~N~L~~ 271 (1141)
..+++|+.|+|++|++++
T Consensus 261 ~~l~~L~~L~l~~N~l~~ 278 (332)
T 2ft3_A 261 PDLKLLQVVYLHTNNITK 278 (332)
T ss_dssp GGCTTCCEEECCSSCCCB
T ss_pred hcCccCCEEECCCCCCCc
Confidence 889999999999999987
No 283
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.95 E-value=3.7e-27 Score=286.06 Aligned_cols=136 Identities=21% Similarity=0.203 Sum_probs=106.2
Q ss_pred cCCCCCcEEEccCCCCCc-cCc---cccCCCCCCEEEccCCcccccc---ccccCCCCCCEEEccCCCCCcCCcCccCCC
Q 001143 161 AGLKCLTKLSVCHFSIRY-LPP---EIGCLSNLEQLDLSFNKMKYLP---TEICYLKALISLKVANNKLVELPSGLYLLQ 233 (1141)
Q Consensus 161 ~~L~~L~~L~Ls~N~L~~-iP~---~l~~l~~L~~L~Ls~N~L~~iP---~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~ 233 (1141)
..+++|+.|++++|+++. +|. .++.+++|+.|+|++|+|+.+| ..+..+++|+.|+|++|+|+.+|..+..++
T Consensus 331 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~~~ 410 (549)
T 2z81_A 331 QHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFHPMPDSCQWPE 410 (549)
T ss_dssp HHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCCCCCSCCCCCT
T ss_pred hcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCccCChhhcccc
Confidence 357889999999999884 332 3677888889999988888775 347888888888888888888888888888
Q ss_pred CCCEEeCCCCCCCCCCccc-----------------ccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcc
Q 001143 234 RLENLDLSNNRLTSLGSLD-----------------LCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFI 296 (1141)
Q Consensus 234 ~L~~L~Ls~N~Lt~~~p~~-----------------l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~ 296 (1141)
+|+.|+|++|+|+.++... +..+++|+.|+|++|+|+. ||.. ........++++.|.+.
T Consensus 411 ~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~~l~~L~~L~Ls~N~l~~---ip~~-~~l~~L~~L~Ls~N~l~ 486 (549)
T 2z81_A 411 KMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSLFLPRLQELYISRNKLKT---LPDA-SLFPVLLVMKISRNQLK 486 (549)
T ss_dssp TCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCCCCTTCCEEECCSSCCSS---CCCG-GGCTTCCEEECCSSCCC
T ss_pred cccEEECCCCCcccccchhcCCceEEECCCCChhhhcccCChhcEEECCCCccCc---CCCc-ccCccCCEEecCCCccC
Confidence 8888888888777654321 1368899999999999986 7873 45667888889999888
Q ss_pred cCcc
Q 001143 297 SSSA 300 (1141)
Q Consensus 297 ~~~~ 300 (1141)
+..+
T Consensus 487 ~~~~ 490 (549)
T 2z81_A 487 SVPD 490 (549)
T ss_dssp CCCT
T ss_pred CcCH
Confidence 7655
No 284
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.95 E-value=1.3e-26 Score=284.89 Aligned_cols=278 Identities=14% Similarity=0.103 Sum_probs=191.3
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRN 95 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~ 95 (1141)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|++++..|..|+.+ ++|++|+|++|.|+.+ |..|.++++|++
T Consensus 57 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~L~~n~i~~l~~~~~~~l~~L~~ 133 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGP---KALKHLFFIQTGISSIDFIPLHNQKTLES 133 (606)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSC---TTCCEEECTTSCCSCGGGSCCTTCTTCCE
T ss_pred ccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhccc---ccccEeeccccCcccCCcchhccCCcccE
Confidence 479999999999999999999999999999999999999888776554 9999999999999988 567999999999
Q ss_pred EEccCCCCCcCc-hhhcCCCCCCEEEccCCCCCCC-cccccCCCCCC--EEECCCCCCCCCcccch--------------
Q 001143 96 LKFFGNEINLFP-SEVGNLLGLECLQIKISSPGVN-GFALNKLKGLK--ELELSKVPPRPSVLTLL-------------- 157 (1141)
Q Consensus 96 L~Ls~N~L~~lP-~~~~~L~~L~~L~Ls~N~l~~~-~~~~~~L~~L~--~L~Ls~N~ln~~~~~lp-------------- 157 (1141)
|+|++|+|+.++ ..+..+++|++|+|++|.+..+ +..+..+++|+ .|++++|.+........
T Consensus 134 L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~ 213 (606)
T 3t6q_A 134 LYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQ 213 (606)
T ss_dssp EECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCS
T ss_pred EECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCch
Confidence 999999999763 3455699999999999997766 45788999999 88999876543221110
Q ss_pred --------------------------------hhhcCCC--CCcEEEccCCCCCccCc-cccCCCCCCEEEccCCccccc
Q 001143 158 --------------------------------SEIAGLK--CLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYL 202 (1141)
Q Consensus 158 --------------------------------~~l~~L~--~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~i 202 (1141)
..+..+. +|+.|++++|.++.+|. .|..+++|++|+|++|+|+.+
T Consensus 214 ~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~l 293 (606)
T 3t6q_A 214 NLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSEL 293 (606)
T ss_dssp CHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSCC
T ss_pred hHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCCC
Confidence 0000000 45556666666665543 356666666666666666666
Q ss_pred cccccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEeCCCCCCCCCCc-ccccCCCCCCEEEccCCcCCCCCCCchhhh
Q 001143 203 PTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGS-LDLCLMHNLQNLNLQYNKLLSYCQVPSWIC 280 (1141)
Q Consensus 203 P~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~Lt~~~p-~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1141)
|..++.+++|++|+|++|+++.+ |..+..+++|+.|+|++|.+++..+ ..+..+++|+.|++++|.+++....|..+.
T Consensus 294 p~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~ 373 (606)
T 3t6q_A 294 PSGLVGLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLR 373 (606)
T ss_dssp CSSCCSCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTT
T ss_pred ChhhcccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcc
Confidence 66666666666666666666644 4455556666666666666653332 235566666666666666654211234444
Q ss_pred hcccCCCCCCCCCCccc
Q 001143 281 CNLEGNGKDSSNDDFIS 297 (1141)
Q Consensus 281 ~~l~~~~l~~~~n~l~~ 297 (1141)
.......+.++.|.+.+
T Consensus 374 ~l~~L~~L~l~~n~l~~ 390 (606)
T 3t6q_A 374 NLSHLQSLNLSYNEPLS 390 (606)
T ss_dssp TCTTCCEEECCSCSCEE
T ss_pred cCCCCCEEECCCCcCCc
Confidence 44445555555554433
No 285
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.94 E-value=7.6e-27 Score=286.97 Aligned_cols=265 Identities=15% Similarity=0.088 Sum_probs=147.5
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccccCCcCCcE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSVGRYEKLRN 95 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l~~L~~L~~ 95 (1141)
++++.+.+..|.++.++ .+..+++|+.|+|++|.+ +.+|. + .+++|++|+|++|... .+ .+..+++|++
T Consensus 285 ~~L~~L~l~~~~~~~l~--~l~~~~~L~~L~l~~n~l-~~lp~-~----~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~ 354 (606)
T 3vq2_A 285 ANVSAMSLAGVSIKYLE--DVPKHFKWQSLSIIRCQL-KQFPT-L----DLPFLKSLTLTMNKGSISF--KKVALPSLSY 354 (606)
T ss_dssp TTCSEEEEESCCCCCCC--CCCTTCCCSEEEEESCCC-SSCCC-C----CCSSCCEEEEESCSSCEEC--CCCCCTTCCE
T ss_pred CCCCEEEecCccchhhh--hccccccCCEEEcccccC-ccccc-C----CCCccceeeccCCcCccch--hhccCCCCCE
Confidence 35667777777777765 677777778888887777 44443 2 3355666666665332 22 3445555666
Q ss_pred EEccCCCCCcC---chhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccch-hhhcCCCCCcEEEc
Q 001143 96 LKFFGNEINLF---PSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLL-SEIAGLKCLTKLSV 171 (1141)
Q Consensus 96 L~Ls~N~L~~l---P~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp-~~l~~L~~L~~L~L 171 (1141)
|+|++|+|+.+ |..+..+++|+.|+|++|.+..+|..+..+++|+.|++++|.+. +..| ..+..+++|+.|++
T Consensus 355 L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~l~~n~l~---~~~~~~~~~~l~~L~~L~l 431 (606)
T 3vq2_A 355 LDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAIIMSANFMGLEELQHLDFQHSTLK---RVTEFSAFLSLEKLLYLDI 431 (606)
T ss_dssp EECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEEECCCCTTCTTCCEEECTTSEEE---STTTTTTTTTCTTCCEEEC
T ss_pred EECcCCccCCCcchhhhhccCCcccEeECCCCccccchhhccCCCCCCeeECCCCccC---CccChhhhhccccCCEEEC
Confidence 66666655533 45555556666666665555555555555555666666553322 1222 34555555555555
Q ss_pred cCCCCCc-cCccccCCCCCCEEEccCCcccc--ccccccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEeCCCCCCCC
Q 001143 172 CHFSIRY-LPPEIGCLSNLEQLDLSFNKMKY--LPTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 172 s~N~L~~-iP~~l~~l~~L~~L~Ls~N~L~~--iP~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
++|.++. +|..+..+++|++|+|++|+++. +|..++.+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|++++
T Consensus 432 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 511 (606)
T 3vq2_A 432 SYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLF 511 (606)
T ss_dssp TTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSC
T ss_pred cCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCC
Confidence 5555553 34445555555555555555553 455555555555555555555533 3445555555555555555555
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcc-cCCCCCCCCCCccc
Q 001143 248 LGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNL-EGNGKDSSNDDFIS 297 (1141)
Q Consensus 248 ~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l-~~~~l~~~~n~l~~ 297 (1141)
.+|..|..+++|+.|+|++|+|+. +|..+.... ....+++.+|.+.|
T Consensus 512 ~~~~~~~~l~~L~~L~l~~N~l~~---~p~~~~~l~~~L~~l~l~~N~~~c 559 (606)
T 3vq2_A 512 LDSSHYNQLYSLSTLDCSFNRIET---SKGILQHFPKSLAFFNLTNNSVAC 559 (606)
T ss_dssp EEGGGTTTCTTCCEEECTTSCCCC---EESCGGGSCTTCCEEECCSCCCCC
T ss_pred cCHHHccCCCcCCEEECCCCcCcc---cCHhHhhhcccCcEEEccCCCccc
Confidence 555555555555555555555553 554444333 24455555555544
No 286
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=5.8e-26 Score=259.57 Aligned_cols=263 Identities=18% Similarity=0.178 Sum_probs=210.3
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1141)
+.++.|.+..|+|+.+.+ |.++++|++|+|++|.++.. + . +.++++|++|+|++|.++.+|. +..+++|+.|
T Consensus 66 ~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~~-~-~---~~~l~~L~~L~l~~n~i~~~~~-~~~l~~L~~L 137 (347)
T 4fmz_A 66 TNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITDI-S-A---LQNLTNLRELYLNEDNISDISP-LANLTKMYSL 137 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-G-G---GTTCTTCSEEECTTSCCCCCGG-GTTCTTCCEE
T ss_pred CCccEEEccCCccccchh--hhcCCcCCEEEccCCcccCc-h-H---HcCCCcCCEEECcCCcccCchh-hccCCceeEE
Confidence 478999999999999877 99999999999999999874 2 2 4556999999999999998876 8899999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCC
Q 001143 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1141)
Q Consensus 97 ~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1141)
+|++|.....+..+..+++|+.|++++|.+...+. +..+++|++|++++|.+... +. +..+++|+.|++++|.+
T Consensus 138 ~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~-~~~l~~L~~L~l~~n~l~~~----~~-~~~l~~L~~L~l~~n~l 211 (347)
T 4fmz_A 138 NLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP-IANLTDLYSLSLNYNQIEDI----SP-LASLTSLHYFTAYVNQI 211 (347)
T ss_dssp ECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGG-GGGCTTCSEEECTTSCCCCC----GG-GGGCTTCCEEECCSSCC
T ss_pred ECCCCCCcccccchhhCCCCcEEEecCCCcCCchh-hccCCCCCEEEccCCccccc----cc-ccCCCccceeecccCCC
Confidence 99999655444458899999999999999777766 88899999999998766433 22 66778888888888888
Q ss_pred CccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCC
Q 001143 177 RYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1141)
Q Consensus 177 ~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L 256 (1141)
+.++. +..+++|+.|+|++|+++.+|. +..+++|+.|+|++|.++.++ .+..+++|+.|+|++|+++++ + .+..+
T Consensus 212 ~~~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~-~~~~l~~L~~L~l~~n~l~~~-~-~~~~l 286 (347)
T 4fmz_A 212 TDITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDIN-AVKDLTKLKMLNVGSNQISDI-S-VLNNL 286 (347)
T ss_dssp CCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCG-GGTTCTTCCEEECCSSCCCCC-G-GGGGC
T ss_pred CCCch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCCh-hHhcCCCcCEEEccCCccCCC-h-hhcCC
Confidence 87655 6778888888888888887766 777888888888888888774 577788888888888888876 2 57778
Q ss_pred CCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcc
Q 001143 257 HNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 257 ~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
++|+.|+|++|++++ ..|..+........+++.+|.+.+..|
T Consensus 287 ~~L~~L~L~~n~l~~--~~~~~l~~l~~L~~L~L~~n~l~~~~~ 328 (347)
T 4fmz_A 287 SQLNSLFLNNNQLGN--EDMEVIGGLTNLTTLFLSQNHITDIRP 328 (347)
T ss_dssp TTCSEEECCSSCCCG--GGHHHHHTCTTCSEEECCSSSCCCCGG
T ss_pred CCCCEEECcCCcCCC--cChhHhhccccCCEEEccCCccccccC
Confidence 888888888888876 355666666777777777777766544
No 287
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.94 E-value=2.8e-26 Score=271.73 Aligned_cols=268 Identities=16% Similarity=0.134 Sum_probs=220.4
Q ss_pred cccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccC-ccccCCcCCcEEEc
Q 001143 21 KLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIP-KSVGRYEKLRNLKF 98 (1141)
Q Consensus 21 ~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP-~~l~~L~~L~~L~L 98 (1141)
.+....++++.++. + .++|++|||++|+|++..|..|+.+ ++|++|+|++|.++ .+| ..|.++++|++|+|
T Consensus 14 ~~~c~~~~l~~lp~--l--~~~l~~L~Ls~n~i~~~~~~~~~~l---~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~L 86 (455)
T 3v47_A 14 NAICINRGLHQVPE--L--PAHVNYVDLSLNSIAELNETSFSRL---QDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKL 86 (455)
T ss_dssp EEECCSSCCSSCCC--C--CTTCCEEECCSSCCCEECTTTTSSC---TTCCEEECCCCSTTCEECTTTTTTCTTCCEEEC
T ss_pred ccCcCCCCcccCCC--C--CCccCEEEecCCccCcCChhHhccC---ccccEEECcCCcccceECcccccccccCCEEeC
Confidence 35566778888876 2 2789999999999999888776555 99999999999997 675 57999999999999
Q ss_pred cCCCCCcC-chhhcCCCCCCEEEccCCCCCC-Ccc--cccCCCCCCEEECCCCCCCCCcccchhh-hcCCCCCcEEEccC
Q 001143 99 FGNEINLF-PSEVGNLLGLECLQIKISSPGV-NGF--ALNKLKGLKELELSKVPPRPSVLTLLSE-IAGLKCLTKLSVCH 173 (1141)
Q Consensus 99 s~N~L~~l-P~~~~~L~~L~~L~Ls~N~l~~-~~~--~~~~L~~L~~L~Ls~N~ln~~~~~lp~~-l~~L~~L~~L~Ls~ 173 (1141)
++|+|+.+ |..|+++++|++|+|++|.+.. .+. .+..+++|++|+|++|.+... .|.. +.++++|+.|++++
T Consensus 87 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~---~~~~~~~~l~~L~~L~L~~ 163 (455)
T 3v47_A 87 DYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKI---QPASFFLNMRRFHVLDLTF 163 (455)
T ss_dssp TTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSC---CCCGGGGGCTTCCEEECTT
T ss_pred CCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCcc---CcccccCCCCcccEEeCCC
Confidence 99999966 7889999999999999999775 333 389999999999999766433 3444 78899999999999
Q ss_pred CCCCcc-CccccCC------------------------------------------------------------------
Q 001143 174 FSIRYL-PPEIGCL------------------------------------------------------------------ 186 (1141)
Q Consensus 174 N~L~~i-P~~l~~l------------------------------------------------------------------ 186 (1141)
|+++.+ |..+..+
T Consensus 164 n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~ 243 (455)
T 3v47_A 164 NKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQS 243 (455)
T ss_dssp CCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEE
T ss_pred CcccccChhhhhccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceee
Confidence 998855 3333222
Q ss_pred -------------------------------CCCCEEEccCCcccc-ccccccCCCCCCEEEccCCCCCcC-CcCccCCC
Q 001143 187 -------------------------------SNLEQLDLSFNKMKY-LPTEICYLKALISLKVANNKLVEL-PSGLYLLQ 233 (1141)
Q Consensus 187 -------------------------------~~L~~L~Ls~N~L~~-iP~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~ 233 (1141)
++|+.|+|++|+|+. +|..++.+++|+.|+|++|+|+.+ |..+..++
T Consensus 244 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 323 (455)
T 3v47_A 244 LILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLT 323 (455)
T ss_dssp EECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCT
T ss_pred EeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcc
Confidence 245555555555553 466788899999999999999976 66888999
Q ss_pred CCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcc
Q 001143 234 RLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 234 ~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
+|+.|+|++|+|++++|..|..+++|+.|+|++|++++ ..|..+........+++.+|.+.+..+
T Consensus 324 ~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~L~~N~l~~~~~ 388 (455)
T 3v47_A 324 HLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRA--LGDQSFLGLPNLKELALDTNQLKSVPD 388 (455)
T ss_dssp TCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCE--ECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccc--cChhhccccccccEEECCCCccccCCH
Confidence 99999999999999999999999999999999999988 257778888888889999998876443
No 288
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.94 E-value=4.6e-26 Score=284.03 Aligned_cols=278 Identities=22% Similarity=0.155 Sum_probs=202.2
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCC--cccccCCCCCCCccEEEeecCCCCcc-CccccCCcCC
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPL--IESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKL 93 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~--p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L 93 (1141)
+.++.|.+..|+|+.+.+..|.++++|++|+|++|.++... ...|..+ ..++|+.|+|++|+++.+ |..|..+++|
T Consensus 329 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~-~~~~L~~L~L~~n~l~~~~~~~~~~l~~L 407 (680)
T 1ziw_A 329 KCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSL-AHSPLHILNLTKNKISKIESDAFSWLGHL 407 (680)
T ss_dssp TTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGG-TTSCCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred CCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhccc-ccCcCceEECCCCCCCeEChhhhhCCCCC
Confidence 36777778888888888888888888888888877654322 2222221 124677888888888765 4567888888
Q ss_pred cEEEccCCCCC-cCc-hhhcCCCCCCEEEccCCCCCC-CcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEE
Q 001143 94 RNLKFFGNEIN-LFP-SEVGNLLGLECLQIKISSPGV-NGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLS 170 (1141)
Q Consensus 94 ~~L~Ls~N~L~-~lP-~~~~~L~~L~~L~Ls~N~l~~-~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~ 170 (1141)
+.|+|++|.|+ .+| ..|.++++|+.|+|++|.+.. .+..|..+++|+.|++++|.+... +.+|..|.++++|+.|+
T Consensus 408 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~-~~~p~~~~~l~~L~~L~ 486 (680)
T 1ziw_A 408 EVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNV-DSSPSPFQPLRNLTILD 486 (680)
T ss_dssp CEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCT-TCSSCTTTTCTTCCEEE
T ss_pred CEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccccc-ccCCcccccCCCCCEEE
Confidence 88888888886 565 567788888888888888443 345677788888888888665332 45677788888888888
Q ss_pred ccCCCCCccCc-cccCCCCCCEEEccCCccccccc---------cccCCCCCCEEEccCCCCCcCCcC-ccCCCCCCEEe
Q 001143 171 VCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPT---------EICYLKALISLKVANNKLVELPSG-LYLLQRLENLD 239 (1141)
Q Consensus 171 Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~iP~---------~l~~l~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~ 239 (1141)
+++|+|+.+|+ .+..+++|++|+|++|+|+.++. .+..+++|+.|+|++|+|+.||.. +.++++|+.|+
T Consensus 487 Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 566 (680)
T 1ziw_A 487 LSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIID 566 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeE
Confidence 88888887755 46788888888888888876532 267788888888888888888754 66788888888
Q ss_pred CCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhh-hcccCCCCCCCCCCcccC
Q 001143 240 LSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWIC-CNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 240 Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~-~~l~~~~l~~~~n~l~~~ 298 (1141)
|++|+|+++++..|..+++|+.|+|++|+|++. .|..+. .......+++.+|.+.|.
T Consensus 567 Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~--~~~~~~~~~~~L~~l~l~~N~~~c~ 624 (680)
T 1ziw_A 567 LGLNNLNTLPASVFNNQVSLKSLNLQKNLITSV--EKKVFGPAFRNLTELDMRFNPFDCT 624 (680)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBC--CHHHHHHHHTTCSEEECTTCCCCBC
T ss_pred CCCCCCCcCCHhHhCCCCCCCEEECCCCcCCcc--ChhHhcccccccCEEEccCCCcccC
Confidence 888888888887778888888888888888872 333333 455566677777766554
No 289
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.94 E-value=8.6e-27 Score=298.48 Aligned_cols=259 Identities=19% Similarity=0.168 Sum_probs=181.2
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRN 95 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~ 95 (1141)
+.++.|.+..|+|+.+.+..|.++++|+.|+|++|+|++..+..|.. +++|++|+|++|.|+.+ |..|..+++|+.
T Consensus 266 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~---l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 342 (844)
T 3j0a_A 266 SSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYG---LDNLQVLNLSYNLLGELYSSNFYGLPKVAY 342 (844)
T ss_dssp SCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTT---CSSCCEEEEESCCCSCCCSCSCSSCTTCCE
T ss_pred CCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcC---CCCCCEEECCCCCCCccCHHHhcCCCCCCE
Confidence 47888999999999999999999999999999999999888876654 48999999999999877 667999999999
Q ss_pred EEccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCcc-----------------------------------------cc
Q 001143 96 LKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGF-----------------------------------------AL 133 (1141)
Q Consensus 96 L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~~~~~-----------------------------------------~~ 133 (1141)
|+|++|+|+.++. .|.++++|+.|+|++|.++.++. .+
T Consensus 343 L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~ 422 (844)
T 3j0a_A 343 IDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFL 422 (844)
T ss_dssp EECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHH
T ss_pred EECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhh
Confidence 9999999997754 58889999999999998765542 01
Q ss_pred cCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCcc------CccccCCCCCCEEEccCCcccccc-ccc
Q 001143 134 NKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL------PPEIGCLSNLEQLDLSFNKMKYLP-TEI 206 (1141)
Q Consensus 134 ~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~i------P~~l~~l~~L~~L~Ls~N~L~~iP-~~l 206 (1141)
..+++|++|+|++|.+...... ..+..+++|+.|+|++|.++.+ |..|..+++|+.|+|++|+|+.+| ..|
T Consensus 423 ~~l~~L~~L~Ls~N~l~~~~~~--~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 500 (844)
T 3j0a_A 423 LRVPHLQILILNQNRFSSCSGD--QTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVF 500 (844)
T ss_dssp TTCTTCCEEEEESCCCCCCCSS--SSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSS
T ss_pred hcCCccceeeCCCCcccccccc--cccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHc
Confidence 1233333333333332211110 0122334444444444444322 123556667777777777777554 446
Q ss_pred cCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhccc
Q 001143 207 CYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLE 284 (1141)
Q Consensus 207 ~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~ 284 (1141)
..+++|+.|+|++|+|+.+|..... ++|+.|+|++|+|++.+|..| .+|+.|+|++|+|.|.|++.+...|...
T Consensus 501 ~~l~~L~~L~Ls~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~~---~~L~~l~l~~Np~~C~c~~~~f~~~~~~ 574 (844)
T 3j0a_A 501 SHLTALRGLSLNSNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDVF---VSLSVLDITHNKFICECELSTFINWLNH 574 (844)
T ss_dssp SSCCSCSEEEEESCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCCC---SSCCEEEEEEECCCCSSSCCSHHHHHHH
T ss_pred cchhhhheeECCCCCCCccChhhhh-ccccEEECCCCcCCCCChhHh---CCcCEEEecCCCcccccccHHHHHHHHh
Confidence 6777777777777777777655444 677777777777777777543 4677888888888888877666655443
No 290
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.6e-26 Score=284.75 Aligned_cols=271 Identities=17% Similarity=0.170 Sum_probs=223.6
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNL 96 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L 96 (1141)
++..+.+..|.++.+++..|.++++|++|+|++|.|++.++..|+.+ ++|++|+|++|.|+.+|+ .|.++++|++|
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYA---HTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTC---TTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCC---CCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 56778888999999999999999999999999999999888766544 999999999999998865 57999999999
Q ss_pred EccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchh-------------hhc
Q 001143 97 KFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLS-------------EIA 161 (1141)
Q Consensus 97 ~Ls~N~L~~lP~~-~~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~lp~-------------~l~ 161 (1141)
+|++|.|+.+|.. |+++++|++|+|++|.+..++ ..|..+++|++|+|++|.+......... .+.
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~ 208 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLA 208 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEE
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccccc
Confidence 9999999999877 689999999999999977665 4799999999999999877544211100 112
Q ss_pred CCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEeC
Q 001143 162 GLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDL 240 (1141)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~L 240 (1141)
...+|+.|++++|.++.+|..+ .++|+.|+|++|.|+.+ ..++.+++|+.|+|++|.|+.+ |..++.+++|+.|+|
T Consensus 209 ~~~~L~~L~ls~n~l~~~~~~~--~~~L~~L~L~~n~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 285 (597)
T 3oja_B 209 IPIAVEELDASHNSINVVRGPV--NVELTILKLQHNNLTDT-AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYI 285 (597)
T ss_dssp CCTTCSEEECCSSCCCEEECSC--CSCCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEEC
T ss_pred CCchhheeeccCCccccccccc--CCCCCEEECCCCCCCCC-hhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEEC
Confidence 2344556666666666554432 36788999999988875 5788899999999999999855 788999999999999
Q ss_pred CCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccC
Q 001143 241 SNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 241 s~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~ 298 (1141)
++|+|+++++ .+..+++|+.|+|++|+++. +|..+..+..+..+++.+|.+.+.
T Consensus 286 s~N~l~~l~~-~~~~l~~L~~L~Ls~N~l~~---i~~~~~~l~~L~~L~L~~N~l~~~ 339 (597)
T 3oja_B 286 SNNRLVALNL-YGQPIPTLKVLDLSHNHLLH---VERNQPQFDRLENLYLDHNSIVTL 339 (597)
T ss_dssp TTSCCCEEEC-SSSCCTTCCEEECCSSCCCC---CGGGHHHHTTCSEEECCSSCCCCC
T ss_pred CCCCCCCCCc-ccccCCCCcEEECCCCCCCc---cCcccccCCCCCEEECCCCCCCCc
Confidence 9999999754 67789999999999999986 888888888888888888887654
No 291
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.94 E-value=1.4e-25 Score=256.49 Aligned_cols=261 Identities=19% Similarity=0.236 Sum_probs=225.0
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1141)
+.+..|.+..|+++.++ .|..+++|++|+|++|++++..+ + .++++|++|+|++|.++.+| .|..+++|++|
T Consensus 44 ~~L~~L~l~~~~i~~~~--~~~~~~~L~~L~l~~n~i~~~~~--~---~~l~~L~~L~L~~n~i~~~~-~~~~l~~L~~L 115 (347)
T 4fmz_A 44 ESITKLVVAGEKVASIQ--GIEYLTNLEYLNLNGNQITDISP--L---SNLVKLTNLYIGTNKITDIS-ALQNLTNLREL 115 (347)
T ss_dssp TTCSEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--G---TTCTTCCEEECCSSCCCCCG-GGTTCTTCSEE
T ss_pred ccccEEEEeCCccccch--hhhhcCCccEEEccCCccccchh--h---hcCCcCCEEEccCCcccCch-HHcCCCcCCEE
Confidence 46788999999999885 48899999999999999997654 4 45599999999999999986 58999999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCC
Q 001143 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1141)
Q Consensus 97 ~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1141)
+|++|.|+.+|. +..+++|+.|++++|........+..+++|++|++++|.+.... . +..+++|+.|++++|.+
T Consensus 116 ~l~~n~i~~~~~-~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~----~-~~~l~~L~~L~l~~n~l 189 (347)
T 4fmz_A 116 YLNEDNISDISP-LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVT----P-IANLTDLYSLSLNYNQI 189 (347)
T ss_dssp ECTTSCCCCCGG-GTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCG----G-GGGCTTCSEEECTTSCC
T ss_pred ECcCCcccCchh-hccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcCCch----h-hccCCCCCEEEccCCcc
Confidence 999999999877 88999999999999974444445999999999999997664332 2 78899999999999999
Q ss_pred CccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCC
Q 001143 177 RYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1141)
Q Consensus 177 ~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L 256 (1141)
+.++. +..+++|+.|++++|.++.++. +..+++|+.|+|++|+++.+|. +..+++|+.|+|++|+++++ ..+..+
T Consensus 190 ~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~--~~~~~l 264 (347)
T 4fmz_A 190 EDISP-LASLTSLHYFTAYVNQITDITP-VANMTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQISDI--NAVKDL 264 (347)
T ss_dssp CCCGG-GGGCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCC--GGGTTC
T ss_pred ccccc-ccCCCccceeecccCCCCCCch-hhcCCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCccCCC--hhHhcC
Confidence 98876 8899999999999999998766 8889999999999999998876 88899999999999999987 368899
Q ss_pred CCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcc
Q 001143 257 HNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 257 ~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
++|+.|++++|+++. +| .+........+++.+|.+.+..+
T Consensus 265 ~~L~~L~l~~n~l~~---~~-~~~~l~~L~~L~L~~n~l~~~~~ 304 (347)
T 4fmz_A 265 TKLKMLNVGSNQISD---IS-VLNNLSQLNSLFLNNNQLGNEDM 304 (347)
T ss_dssp TTCCEEECCSSCCCC---CG-GGGGCTTCSEEECCSSCCCGGGH
T ss_pred CCcCEEEccCCccCC---Ch-hhcCCCCCCEEECcCCcCCCcCh
Confidence 999999999999987 54 46666778888888888765543
No 292
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.94 E-value=3.1e-26 Score=278.76 Aligned_cols=142 Identities=18% Similarity=0.167 Sum_probs=112.4
Q ss_pred hhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCcccccc--ccccCCCCCCEEEccCCCCCc-CCcCccCCC
Q 001143 157 LSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLP--TEICYLKALISLKVANNKLVE-LPSGLYLLQ 233 (1141)
Q Consensus 157 p~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP--~~l~~l~~L~~L~Ls~N~L~~-IP~~l~~L~ 233 (1141)
|..+.++++|+.|++++|.++.+|..+..+++|+.|+|++|.++.++ ..+..+++|+.|+|++|.++. +|..+..++
T Consensus 366 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 445 (570)
T 2z63_A 366 SQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLS 445 (570)
T ss_dssp EHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCT
T ss_pred cccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCC
Confidence 34566778899999999999888777888899999999999888653 367888888888888888874 566777888
Q ss_pred CCCEEeCCCCCCC-CCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcc
Q 001143 234 RLENLDLSNNRLT-SLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 234 ~L~~L~Ls~N~Lt-~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
+|+.|+|++|+++ +..|..+..+++|+.|+|++|++++ ..|..+........+++.+|.+.+..+
T Consensus 446 ~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~--~~~~~~~~l~~L~~L~l~~n~l~~~~~ 511 (570)
T 2z63_A 446 SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ--LSPTAFNSLSSLQVLNMASNQLKSVPD 511 (570)
T ss_dssp TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE--ECTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred cCcEEECcCCcCccccchhhhhcccCCCEEECCCCcccc--CChhhhhcccCCCEEeCCCCcCCCCCH
Confidence 8888888888887 4566678888888888888888887 246677777777778888887766543
No 293
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.94 E-value=2.5e-26 Score=279.70 Aligned_cols=132 Identities=16% Similarity=0.108 Sum_probs=106.7
Q ss_pred CCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCc
Q 001143 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLR 94 (1141)
Q Consensus 16 ~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~ 94 (1141)
++.+..|.+..|+|+.+.+.+|.++++|++|||++|+|++..+..|+ ++++|++|+|++|.|+.+| ..|.++++|+
T Consensus 27 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~---~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 103 (570)
T 2z63_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQ---SLSHLSTLILTGNPIQSLALGAFSGLSSLQ 103 (570)
T ss_dssp CSSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTT---TCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred cccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCccccc---CchhCCEEeCcCCcCCccCHhhhcCccccc
Confidence 45688888889999988888899999999999999988887776554 4488888888888888775 5688888888
Q ss_pred EEEccCCCCCcCch-hhcCCCCCCEEEccCCCCCC--CcccccCCCCCCEEECCCCCCC
Q 001143 95 NLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGV--NGFALNKLKGLKELELSKVPPR 150 (1141)
Q Consensus 95 ~L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~~--~~~~~~~L~~L~~L~Ls~N~ln 150 (1141)
+|+|++|+|+.+|. .|+++++|++|+|++|.+.. +|..+.++++|++|++++|.+.
T Consensus 104 ~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~ 162 (570)
T 2z63_A 104 KLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (570)
T ss_dssp EEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCC
T ss_pred cccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccc
Confidence 88888888887765 58888888888888888665 5677888888888888877643
No 294
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.94 E-value=6.6e-28 Score=295.29 Aligned_cols=194 Identities=15% Similarity=0.112 Sum_probs=129.7
Q ss_pred eEeeeecccCceEEEEEE--ECCccEEEEEEecccCCC--ChHHHHHhHHhHHHHHHHHhhC-CCCCccceeeeEecCCC
Q 001143 809 SSCDEAGKSVSSSLFRCK--FGSADAAAKVRTLKVCGS--SADEIRNFEYSCLGEVRMLGAL-RHSCIVEMYGHKISSKW 883 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~--~~~~~vAvKI~~l~~~~~--~~~~~~~~~~~~~~Ei~iL~~L-~HpNIVkllg~~~~~~~ 883 (1141)
......+.|+.|.+..++ +-+..+++|++..+.... .....+.-.+.+.+|+++|+++ .|+||++++++++++..
T Consensus 237 ~w~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~ 316 (569)
T 4azs_A 237 HWQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQS 316 (569)
T ss_dssp EEECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSE
T ss_pred hhhhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCE
Confidence 344456777777766654 368889999986543222 2222233334568999999999 69999999999998764
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeec
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDL 963 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~ 963 (1141)
.||||||++|++|.++|.+ ..+++.. +|+.||+.||+|+|++|||||||||+|||++.
T Consensus 317 --------------~yLVMEyv~G~~L~d~i~~-----~~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~ 374 (569)
T 4azs_A 317 --------------GWLVMEKLPGRLLSDMLAA-----GEEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDA 374 (569)
T ss_dssp --------------EEEEEECCCSEEHHHHHHT-----TCCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECT
T ss_pred --------------EEEEEecCCCCcHHHHHHh-----CCCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECC
Confidence 4999999999999999986 3456654 58899999999999999999999999999998
Q ss_pred ccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHH
Q 001143 964 ERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELL 1043 (1141)
Q Consensus 964 ~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELL 1043 (1141)
+ +.+||+|||+|+....... .....+||+.|||||++.+ .+..++|+||+|+++++|.
T Consensus 375 d-------g~vKL~DFGlAr~~~~~~~----------~~~t~vGTp~YmAPE~l~g-----~~~~~~d~~s~g~~~~~l~ 432 (569)
T 4azs_A 375 R-------QHARLIDFGSIVTTPQDCS----------WPTNLVQSFFVFVNELFAE-----NKSWNGFWRSAPVHPFNLP 432 (569)
T ss_dssp T-------SCEEECCCTTEESCC---C----------CSHHHHHHHHHHHHHHC----------------------CCCC
T ss_pred C-------CCEEEeecccCeeCCCCCc----------cccCceechhhccHHHhCC-----CCCCcccccccccchhhhc
Confidence 7 8899999999976543211 1234679999999999876 3567899999999988776
Q ss_pred hCC
Q 001143 1044 TLQ 1046 (1141)
Q Consensus 1044 TGk 1046 (1141)
++.
T Consensus 433 ~~~ 435 (569)
T 4azs_A 433 QPW 435 (569)
T ss_dssp TTH
T ss_pred ccc
Confidence 553
No 295
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.94 E-value=1.2e-25 Score=268.39 Aligned_cols=254 Identities=18% Similarity=0.118 Sum_probs=192.2
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1141)
+.++.|.+..|+|+.++ .|..+++|++|+|++|+|++. | ++.+++|++|+|++|.|+.+| +.++++|++|
T Consensus 42 ~~L~~L~Ls~n~l~~~~--~l~~l~~L~~L~Ls~n~l~~~-~-----~~~l~~L~~L~Ls~N~l~~~~--~~~l~~L~~L 111 (457)
T 3bz5_A 42 ATLTSLDCHNSSITDMT--GIEKLTGLTKLICTSNNITTL-D-----LSQNTNLTYLACDSNKLTNLD--VTPLTKLTYL 111 (457)
T ss_dssp TTCCEEECCSSCCCCCT--TGGGCTTCSEEECCSSCCSCC-C-----CTTCTTCSEEECCSSCCSCCC--CTTCTTCCEE
T ss_pred CCCCEEEccCCCcccCh--hhcccCCCCEEEccCCcCCeE-c-----cccCCCCCEEECcCCCCceee--cCCCCcCCEE
Confidence 35778888888888874 688888899999999988875 2 345588899999999888885 8888889999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCC
Q 001143 97 KFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSI 176 (1141)
Q Consensus 97 ~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L 176 (1141)
+|++|+|+.+| ++++++|+.|++++|.++.++ +..+++|++|++++|.. .+.+ .+..+++|+.|++++|+|
T Consensus 112 ~L~~N~l~~l~--~~~l~~L~~L~l~~N~l~~l~--l~~l~~L~~L~l~~n~~---~~~~--~~~~l~~L~~L~ls~n~l 182 (457)
T 3bz5_A 112 NCDTNKLTKLD--VSQNPLLTYLNCARNTLTEID--VSHNTQLTELDCHLNKK---ITKL--DVTPQTQLTTLDCSFNKI 182 (457)
T ss_dssp ECCSSCCSCCC--CTTCTTCCEEECTTSCCSCCC--CTTCTTCCEEECTTCSC---CCCC--CCTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCeec--CCCCCcCCEEECCCCccceec--cccCCcCCEEECCCCCc---cccc--ccccCCcCCEEECCCCcc
Confidence 99999888876 888889999999888877764 77888899999888632 3333 367788889999999988
Q ss_pred CccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCC
Q 001143 177 RYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1141)
Q Consensus 177 ~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L 256 (1141)
+.+| ++.+++|+.|+|++|+|+.++ ++.+++|+.|+|++|+|+.+| ++.+++|+.|+|++|+|+++++. .+
T Consensus 183 ~~l~--l~~l~~L~~L~l~~N~l~~~~--l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~~~~---~l 253 (457)
T 3bz5_A 183 TELD--VSQNKLLNRLNCDTNNITKLD--LNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTELDVS---TL 253 (457)
T ss_dssp CCCC--CTTCTTCCEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCCCCT---TC
T ss_pred ceec--cccCCCCCEEECcCCcCCeec--cccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCcCHH---HC
Confidence 8887 778888999999999988774 788888999999999998887 77888899999999999887654 44
Q ss_pred CCCCEEEccCCcCCCC--------CCCchhhhhcccCCCCCCCCCCcccCcc
Q 001143 257 HNLQNLNLQYNKLLSY--------CQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 257 ~~L~~L~Ls~N~L~~~--------~~iP~~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
++|+.|++++|+|..+ ..+|. ........+++++|.+.+..|
T Consensus 254 ~~L~~L~l~~n~L~~L~l~~n~~~~~~~~--~~l~~L~~L~Ls~n~~l~~l~ 303 (457)
T 3bz5_A 254 SKLTTLHCIQTDLLEIDLTHNTQLIYFQA--EGCRKIKELDVTHNTQLYLLD 303 (457)
T ss_dssp TTCCEEECTTCCCSCCCCTTCTTCCEEEC--TTCTTCCCCCCTTCTTCCEEE
T ss_pred CCCCEEeccCCCCCEEECCCCccCCcccc--cccccCCEEECCCCcccceec
Confidence 5555555554444331 02331 222445555566665554443
No 296
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.94 E-value=6e-26 Score=283.00 Aligned_cols=259 Identities=17% Similarity=0.162 Sum_probs=223.3
Q ss_pred CCcccccCCCCC--ccccCCCCCCCC--CCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccC-ccccCC
Q 001143 17 PIKEKLPSEANK--INNEKNGSVNDD--DDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIP-KSVGRY 90 (1141)
Q Consensus 17 ~~l~~L~~~~N~--i~~i~~~~f~~l--~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP-~~l~~L 90 (1141)
+.++.|.+..|. +..+....|..+ ++|+.|+|++|++++..|..|.. +++|++|+|++|.++ .+| ..|.++
T Consensus 353 ~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~---l~~L~~L~L~~N~l~~~~~~~~~~~l 429 (680)
T 1ziw_A 353 INLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSW---LGHLEVLDLGLNEIGQELTGQEWRGL 429 (680)
T ss_dssp TTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTT---CTTCCEEECCSSCCEEECCSGGGTTC
T ss_pred cCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhC---CCCCCEEeCCCCcCccccCcccccCc
Confidence 368888888886 566666777655 58999999999999998876654 499999999999997 577 579999
Q ss_pred cCCcEEEccCCCCCcC-chhhcCCCCCCEEEccCCCC---CCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCC
Q 001143 91 EKLRNLKFFGNEINLF-PSEVGNLLGLECLQIKISSP---GVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCL 166 (1141)
Q Consensus 91 ~~L~~L~Ls~N~L~~l-P~~~~~L~~L~~L~Ls~N~l---~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L 166 (1141)
++|++|+|++|+++.+ +..|..+++|+.|++++|.+ ...|..+..+++|+.|++++|.+.. ..+..|.++++|
T Consensus 430 ~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~---i~~~~~~~l~~L 506 (680)
T 1ziw_A 430 ENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIAN---INDDMLEGLEKL 506 (680)
T ss_dssp TTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCC---CCTTTTTTCTTC
T ss_pred ccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCc---CChhhhcccccc
Confidence 9999999999999866 56799999999999999985 4677889999999999999976653 334568999999
Q ss_pred cEEEccCCCCCccCc---------cccCCCCCCEEEccCCccccccc-cccCCCCCCEEEccCCCCCcCCcCc-cCCCCC
Q 001143 167 TKLSVCHFSIRYLPP---------EIGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVELPSGL-YLLQRL 235 (1141)
Q Consensus 167 ~~L~Ls~N~L~~iP~---------~l~~l~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~IP~~l-~~L~~L 235 (1141)
+.|++++|+++.++. .+..+++|+.|+|++|+|+.+|. .|..+++|+.|+|++|+|+.+|... ..+++|
T Consensus 507 ~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L 586 (680)
T 1ziw_A 507 EILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSL 586 (680)
T ss_dssp CEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCC
Confidence 999999999997632 27889999999999999999986 5899999999999999999998764 679999
Q ss_pred CEEeCCCCCCCCCCccccc-CCCCCCEEEccCCcCCCCCCC-chhhhh
Q 001143 236 ENLDLSNNRLTSLGSLDLC-LMHNLQNLNLQYNKLLSYCQV-PSWICC 281 (1141)
Q Consensus 236 ~~L~Ls~N~Lt~~~p~~l~-~L~~L~~L~Ls~N~L~~~~~i-P~~~~~ 281 (1141)
+.|+|++|+|+++++..+. .+++|+.|+|++|+|.|.|+. .+...|
T Consensus 587 ~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~~~~~~~~ 634 (680)
T 1ziw_A 587 KSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCESIAWFVNW 634 (680)
T ss_dssp CEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCCCSSEECC
T ss_pred CEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCccHHHHHHH
Confidence 9999999999999998787 789999999999999999985 544444
No 297
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.94 E-value=9.5e-27 Score=282.48 Aligned_cols=178 Identities=20% Similarity=0.212 Sum_probs=136.4
Q ss_pred CCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCc
Q 001143 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLR 94 (1141)
Q Consensus 16 ~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~ 94 (1141)
++.++.|.+..|+|+.+.+..|.++++|++|+|++|+|++..|..|+. +++|++|+|++|+|+.+|.. |.++++|+
T Consensus 25 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~---l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 101 (549)
T 2z81_A 25 TAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYS---LGSLEHLDLSDNHLSSLSSSWFGPLSSLK 101 (549)
T ss_dssp CTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTT---CTTCCEEECTTSCCCSCCHHHHTTCTTCC
T ss_pred CCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccc---cccCCEEECCCCccCccCHHHhccCCCCc
Confidence 357999999999999999999999999999999999999988876654 49999999999999988764 99999999
Q ss_pred EEEccCCCCCc--CchhhcCCCCCCEEEccCCC-CCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEE
Q 001143 95 NLKFFGNEINL--FPSEVGNLLGLECLQIKISS-PGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLS 170 (1141)
Q Consensus 95 ~L~Ls~N~L~~--lP~~~~~L~~L~~L~Ls~N~-l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~ 170 (1141)
+|+|++|.|+. +|..|+++++|++|+|++|. ++.++ ..+.++++|++|++++|.+. +..|..+..+++|+.|+
T Consensus 102 ~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~---~~~~~~l~~l~~L~~L~ 178 (549)
T 2z81_A 102 YLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR---NYQSQSLKSIRDIHHLT 178 (549)
T ss_dssp EEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC---EECTTTTTTCSEEEEEE
T ss_pred EEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc---ccChhhhhccccCceEe
Confidence 99999999985 47789999999999999998 67666 47899999999999996654 33455555544444444
Q ss_pred ccCCCCCccCccc-cCCCCCCEEEccCCcc
Q 001143 171 VCHFSIRYLPPEI-GCLSNLEQLDLSFNKM 199 (1141)
Q Consensus 171 Ls~N~L~~iP~~l-~~l~~L~~L~Ls~N~L 199 (1141)
++.|.+..+|..+ ..+++|++|+|++|++
T Consensus 179 l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l 208 (549)
T 2z81_A 179 LHLSESAFLLEIFADILSSVRYLELRDTNL 208 (549)
T ss_dssp EECSBSTTHHHHHHHSTTTBSEEEEESCBC
T ss_pred cccCcccccchhhHhhcccccEEEccCCcc
Confidence 4444444333322 2333444444444433
No 298
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.93 E-value=8.4e-26 Score=254.13 Aligned_cols=246 Identities=20% Similarity=0.224 Sum_probs=210.7
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcEEEccCCCCCcC---chhhcCCCCCCE
Q 001143 43 DSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNLKFFGNEINLF---PSEVGNLLGLEC 118 (1141)
Q Consensus 43 L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~L~Ls~N~L~~l---P~~~~~L~~L~~ 118 (1141)
-+.+++++++++..+... . ++|++|+|++|.|+.+|.. |.++++|++|+|++|+|+.+ |..+..+++|++
T Consensus 9 ~~~l~c~~~~l~~ip~~~---~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~ 82 (306)
T 2z66_A 9 GTEIRCNSKGLTSVPTGI---P---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKY 82 (306)
T ss_dssp TTEEECCSSCCSSCCSCC---C---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCE
T ss_pred CCEEEcCCCCcccCCCCC---C---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCE
Confidence 468999999999765432 1 6899999999999999875 78999999999999999865 678889999999
Q ss_pred EEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCcc-CccccCCCCCCEEEccCC
Q 001143 119 LQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFN 197 (1141)
Q Consensus 119 L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N 197 (1141)
|+|++|.+..++..+..+++|++|++++|.+..... +..+..+++|+.|++++|.++.+ |..+..+++|+.|+|++|
T Consensus 83 L~Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 83 LDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSE--FSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp EECCSCSEEEEEEEEETCTTCCEEECTTSEEESSTT--TTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTC
T ss_pred EECCCCccccChhhcCCCCCCCEEECCCCccccccc--chhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCC
Confidence 999999998899889999999999999965533221 14688999999999999999955 667899999999999999
Q ss_pred cccc--ccccccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001143 198 KMKY--LPTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1141)
Q Consensus 198 ~L~~--iP~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1141)
.++. +|..+..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+++++..+..+++|+.|+|++|++++ .
T Consensus 161 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--~ 238 (306)
T 2z66_A 161 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMT--S 238 (306)
T ss_dssp EEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCB--C
T ss_pred ccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcc--c
Confidence 9985 789999999999999999999977 7788899999999999999999998889999999999999999998 3
Q ss_pred Cchhhhhc-ccCCCCCCCCCCcccC
Q 001143 275 VPSWICCN-LEGNGKDSSNDDFISS 298 (1141)
Q Consensus 275 iP~~~~~~-l~~~~l~~~~n~l~~~ 298 (1141)
.|..+... .....+++.+|.+.|.
T Consensus 239 ~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 239 KKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CHHHHHhhhccCCEEEccCCCeecc
Confidence 55555444 2566666777766554
No 299
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.93 E-value=3.4e-25 Score=264.49 Aligned_cols=259 Identities=20% Similarity=0.243 Sum_probs=192.6
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1141)
+.++.|.+..|+|+.+.+ |.++++|++|+|++|.+++..+ + +++++|++|+|++|.++.+|. +.++++|++|
T Consensus 68 ~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~---~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L 139 (466)
T 1o6v_A 68 NNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--L---ANLTNLTGLTLFNNQITDIDP-LKNLTNLNRL 139 (466)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--G---TTCTTCCEEECCSSCCCCCGG-GTTCTTCSEE
T ss_pred cCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--h---cCCCCCCEEECCCCCCCCChH-HcCCCCCCEE
Confidence 478888888999888876 8888899999999998887665 4 445888888888888888765 7888888888
Q ss_pred EccCCCCCcCch--------------------hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccc
Q 001143 97 KFFGNEINLFPS--------------------EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTL 156 (1141)
Q Consensus 97 ~Ls~N~L~~lP~--------------------~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~l 156 (1141)
+|++|.|+.+|. .+.++++|+.|++++|.+..++ .+..+++|++|++++|.+.....
T Consensus 140 ~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~-- 216 (466)
T 1o6v_A 140 ELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDIS-VLAKLTNLESLIATNNQISDITP-- 216 (466)
T ss_dssp EEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG--
T ss_pred ECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCCh-hhccCCCCCEEEecCCccccccc--
Confidence 888888776542 2566788888888888877765 37888888888888866544321
Q ss_pred hhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCC
Q 001143 157 LSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLE 236 (1141)
Q Consensus 157 p~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~ 236 (1141)
++.+++|+.|++++|+++.++ .+..+++|+.|+|++|.++.++. +..+++|+.|+|++|+++.+|. +..+++|+
T Consensus 217 ---~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~ 290 (466)
T 1o6v_A 217 ---LGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNLAP-LSGLTKLTELKLGANQISNISP-LAGLTALT 290 (466)
T ss_dssp ---GGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCCCCGG-GTTCTTCS
T ss_pred ---ccccCCCCEEECCCCCcccch-hhhcCCCCCEEECCCCccccchh-hhcCCCCCEEECCCCccCcccc-ccCCCccC
Confidence 566777888888888877764 46777778888888887776654 7777777888888777777765 66777777
Q ss_pred EEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccC
Q 001143 237 NLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 237 ~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~ 298 (1141)
.|+|++|+++++++ +..+++|+.|+|++|++++ ++. +........+.+.+|.+.+.
T Consensus 291 ~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~---~~~-~~~l~~L~~L~l~~n~l~~~ 346 (466)
T 1o6v_A 291 NLELNENQLEDISP--ISNLKNLTYLTLYFNNISD---ISP-VSSLTKLQRLFFYNNKVSDV 346 (466)
T ss_dssp EEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSC---CGG-GGGCTTCCEEECCSSCCCCC
T ss_pred eEEcCCCcccCchh--hcCCCCCCEEECcCCcCCC---chh-hccCccCCEeECCCCccCCc
Confidence 77777777777655 6677777777777777776 333 44555566666666665544
No 300
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.93 E-value=4.1e-25 Score=263.79 Aligned_cols=260 Identities=22% Similarity=0.263 Sum_probs=225.7
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1141)
.+..|.+..+.++.++ .+..+++|++|||++|.+++..+ + +++++|++|+|++|.++.+|. +.++++|++|+
T Consensus 47 ~l~~L~l~~~~i~~l~--~~~~l~~L~~L~Ls~n~l~~~~~--~---~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~ 118 (466)
T 1o6v_A 47 QVTTLQADRLGIKSID--GVEYLNNLTQINFSNNQLTDITP--L---KNLTKLVDILMNNNQIADITP-LANLTNLTGLT 118 (466)
T ss_dssp TCCEEECCSSCCCCCT--TGGGCTTCCEEECCSSCCCCCGG--G---TTCTTCCEEECCSSCCCCCGG-GTTCTTCCEEE
T ss_pred cccEEecCCCCCccCc--chhhhcCCCEEECCCCccCCchh--h---hccccCCEEECCCCccccChh-hcCCCCCCEEE
Confidence 5778888899998876 48889999999999999998765 4 455999999999999998877 99999999999
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc--------------------cccCCCCCCEEECCCCCCCCCcccch
Q 001143 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF--------------------ALNKLKGLKELELSKVPPRPSVLTLL 157 (1141)
Q Consensus 98 Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~--------------------~~~~L~~L~~L~Ls~N~ln~~~~~lp 157 (1141)
|++|.|+.+|. +.++++|+.|+|++|.+..++. .+..+++|++|++++|.+...
T Consensus 119 L~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~----- 192 (466)
T 1o6v_A 119 LFNNQITDIDP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDI----- 192 (466)
T ss_dssp CCSSCCCCCGG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEEESCCCCGGGTTCTTCCEEECCSSCCCCC-----
T ss_pred CCCCCCCCChH-HcCCCCCCEEECCCCccCCChhhccCCcccEeecCCcccCchhhccCCCCCEEECcCCcCCCC-----
Confidence 99999999876 9999999999999998666542 256778899999999776543
Q ss_pred hhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCE
Q 001143 158 SEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLEN 237 (1141)
Q Consensus 158 ~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~ 237 (1141)
..+..+++|+.|++++|.++.+++ ++.+++|+.|+|++|+++.++ .+..+++|+.|+|++|.++.++. +..+++|+.
T Consensus 193 ~~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~ 269 (466)
T 1o6v_A 193 SVLAKLTNLESLIATNNQISDITP-LGILTNLDELSLNGNQLKDIG-TLASLTNLTDLDLANNQISNLAP-LSGLTKLTE 269 (466)
T ss_dssp GGGGGCTTCSEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCG-GGGGCTTCSEEECCSSCCCCCGG-GTTCTTCSE
T ss_pred hhhccCCCCCEEEecCCccccccc-ccccCCCCEEECCCCCcccch-hhhcCCCCCEEECCCCccccchh-hhcCCCCCE
Confidence 247889999999999999998755 788999999999999999885 68899999999999999998875 888999999
Q ss_pred EeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcc
Q 001143 238 LDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 238 L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
|+|++|+++++++ +..+++|+.|+|++|++++ ++. +........+++..|.+.+..+
T Consensus 270 L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~---~~~-~~~l~~L~~L~L~~n~l~~~~~ 326 (466)
T 1o6v_A 270 LKLGANQISNISP--LAGLTALTNLELNENQLED---ISP-ISNLKNLTYLTLYFNNISDISP 326 (466)
T ss_dssp EECCSSCCCCCGG--GTTCTTCSEEECCSSCCSC---CGG-GGGCTTCSEEECCSSCCSCCGG
T ss_pred EECCCCccCcccc--ccCCCccCeEEcCCCcccC---chh-hcCCCCCCEEECcCCcCCCchh
Confidence 9999999999876 8899999999999999987 554 5666778888888888877654
No 301
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.93 E-value=1.5e-24 Score=258.86 Aligned_cols=184 Identities=19% Similarity=0.112 Sum_probs=129.5
Q ss_pred CCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEE
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNL 96 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L 96 (1141)
+.++.|.+..|+|+.++ |..+++|++|+|++|+|++. + ++++++|++|+|++|+|+.+| +..+++|++|
T Consensus 64 ~~L~~L~Ls~n~l~~~~---~~~l~~L~~L~Ls~N~l~~~-~-----~~~l~~L~~L~L~~N~l~~l~--~~~l~~L~~L 132 (457)
T 3bz5_A 64 TGLTKLICTSNNITTLD---LSQNTNLTYLACDSNKLTNL-D-----VTPLTKLTYLNCDTNKLTKLD--VSQNPLLTYL 132 (457)
T ss_dssp TTCSEEECCSSCCSCCC---CTTCTTCSEEECCSSCCSCC-C-----CTTCTTCCEEECCSSCCSCCC--CTTCTTCCEE
T ss_pred CCCCEEEccCCcCCeEc---cccCCCCCEEECcCCCCcee-e-----cCCCCcCCEEECCCCcCCeec--CCCCCcCCEE
Confidence 47888999999999884 88899999999999999885 2 355689999999999999886 8888999999
Q ss_pred EccCCCCCcCchhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001143 97 KFFGNEINLFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1141)
Q Consensus 97 ~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1141)
+|++|+|+.+| ++++++|+.|++++|. ++.+ .+..+++|++|++++|.+.. +| +..+++|+.|++++|+
T Consensus 133 ~l~~N~l~~l~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~----l~--l~~l~~L~~L~l~~N~ 202 (457)
T 3bz5_A 133 NCARNTLTEID--VSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE----LD--VSQNKLLNRLNCDTNN 202 (457)
T ss_dssp ECTTSCCSCCC--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC----CC--CTTCTTCCEEECCSSC
T ss_pred ECCCCccceec--cccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce----ec--cccCCCCCEEECcCCc
Confidence 99999998775 6777777777777774 4444 36667777777777765543 22 4455555566666555
Q ss_pred CCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcC
Q 001143 176 IRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL 225 (1141)
Q Consensus 176 L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~I 225 (1141)
|+.++ ++.+++|+.|+|++|+|+.+| ++.+++|+.|+|++|+|+.+
T Consensus 203 l~~~~--l~~l~~L~~L~Ls~N~l~~ip--~~~l~~L~~L~l~~N~l~~~ 248 (457)
T 3bz5_A 203 ITKLD--LNQNIQLTFLDCSSNKLTEID--VTPLTQLTYFDCSVNPLTEL 248 (457)
T ss_dssp CSCCC--CTTCTTCSEEECCSSCCSCCC--CTTCTTCSEEECCSSCCSCC
T ss_pred CCeec--cccCCCCCEEECcCCcccccC--ccccCCCCEEEeeCCcCCCc
Confidence 55542 455555555555555555554 55555555555555555544
No 302
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.93 E-value=5.8e-27 Score=265.26 Aligned_cols=245 Identities=20% Similarity=0.164 Sum_probs=198.3
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCC-CCCccccc----CCCCCCCccEEEeecCCCC-ccCccc--cC
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVD-FPLIESYG----NRGGDNSVEGLYLYKNVLN-LIPKSV--GR 89 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls-~~~p~~~~----~l~~L~~L~~L~Ls~N~Lt-~iP~~l--~~ 89 (1141)
.++.+.+..|++ .++...... |+.|+|++|.|+ ..+|..+. .+.++++|++|+|++|.|+ .+|..+ ..
T Consensus 44 ~L~~l~l~~n~l-~~p~~~~~~---L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~ 119 (312)
T 1wwl_A 44 SLEYLLKRVDTE-ADLGQFTDI---IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEAT 119 (312)
T ss_dssp ECTTHHHHCCTT-CCCHHHHHH---HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCC
T ss_pred CceeEeeccccc-ccHHHHHHH---HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhc
Confidence 467777777888 444322222 888899999884 44555443 0013489999999999998 688876 89
Q ss_pred CcCCcEEEccCCCCCcCchhhcCC-----CCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhh--c
Q 001143 90 YEKLRNLKFFGNEINLFPSEVGNL-----LGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEI--A 161 (1141)
Q Consensus 90 L~~L~~L~Ls~N~L~~lP~~~~~L-----~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l--~ 161 (1141)
+++|++|+|++|+|+.+|..++.+ ++|++|+|++|+++.++ ..+..+++|++|+|++|.+....+ +|..+ .
T Consensus 120 l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-~~~~~~~~ 198 (312)
T 1wwl_A 120 GPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERG-LISALCPL 198 (312)
T ss_dssp SCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHH-HHHHSCTT
T ss_pred CCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchH-HHHHHHhc
Confidence 999999999999999888888877 99999999999987777 689999999999999976532221 34444 8
Q ss_pred CCCCCcEEEccCCCCCccC---cc-ccCCCCCCEEEccCCcccccc--ccccCCCCCCEEEccCCCCCcCCcCccCCCCC
Q 001143 162 GLKCLTKLSVCHFSIRYLP---PE-IGCLSNLEQLDLSFNKMKYLP--TEICYLKALISLKVANNKLVELPSGLYLLQRL 235 (1141)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~iP---~~-l~~l~~L~~L~Ls~N~L~~iP--~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L 235 (1141)
.+++|+.|+|++|+|+.+| .. +..+++|+.|+|++|+|+.++ ..+..+++|+.|+|++|+|+.||..+. ++|
T Consensus 199 ~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L 276 (312)
T 1wwl_A 199 KFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP--AKL 276 (312)
T ss_dssp SCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC--SEE
T ss_pred cCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc--CCc
Confidence 8999999999999999543 33 367899999999999999654 456678999999999999999999888 889
Q ss_pred CEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 001143 236 ENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 236 ~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
+.|+|++|+|+++ |. +..+++|+.|+|++|+|++
T Consensus 277 ~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 277 SVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp EEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred eEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 9999999999999 43 8999999999999999986
No 303
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=1.7e-26 Score=262.05 Aligned_cols=248 Identities=17% Similarity=0.132 Sum_probs=205.7
Q ss_pred cccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEc
Q 001143 19 KEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKF 98 (1141)
Q Consensus 19 l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~L 98 (1141)
+..+.+..+++.......+..+++|++|||++|+|++..|..|+.+ ++|++|+|++|.|+.+++ |..+++|++|+|
T Consensus 12 l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l---~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~L 87 (317)
T 3o53_A 12 YKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPF---TKLELLNLSSNVLYETLD-LESLSTLRTLDL 87 (317)
T ss_dssp EEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTC---TTCCEEECTTSCCEEEEE-ETTCTTCCEEEC
T ss_pred eeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCC---CcCCEEECCCCcCCcchh-hhhcCCCCEEEC
Confidence 4445566677777767777888899999999999999888777655 999999999999987765 899999999999
Q ss_pred cCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc
Q 001143 99 FGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1141)
Q Consensus 99 s~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1141)
++|+|+.+|. +++|+.|++++|.+..++. ..+++|++|++++|.+... .+..+..+++|+.|++++|.|+.
T Consensus 88 s~n~l~~l~~----~~~L~~L~l~~n~l~~~~~--~~~~~L~~L~l~~N~l~~~---~~~~~~~l~~L~~L~Ls~N~l~~ 158 (317)
T 3o53_A 88 NNNYVQELLV----GPSIETLHAANNNISRVSC--SRGQGKKNIYLANNKITML---RDLDEGCRSRVQYLDLKLNEIDT 158 (317)
T ss_dssp CSSEEEEEEE----CTTCCEEECCSSCCSEEEE--CCCSSCEEEECCSSCCCSG---GGBCTGGGSSEEEEECTTSCCCE
T ss_pred cCCccccccC----CCCcCEEECCCCccCCcCc--cccCCCCEEECCCCCCCCc---cchhhhccCCCCEEECCCCCCCc
Confidence 9999987763 3899999999999877664 4478899999999766543 34467788999999999999996
Q ss_pred c-Cccc-cCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCC
Q 001143 179 L-PPEI-GCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1141)
Q Consensus 179 i-P~~l-~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L 256 (1141)
+ |..+ ..+++|++|+|++|.|+.+|.. ..+++|+.|+|++|+|+.+|..+..+++|+.|+|++|+|+++++ .+..+
T Consensus 159 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l~~-~~~~l 236 (317)
T 3o53_A 159 VNFAELAASSDTLEHLNLQYNFIYDVKGQ-VVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEK-ALRFS 236 (317)
T ss_dssp EEGGGGGGGTTTCCEEECTTSCCCEEECC-CCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECT-TCCCC
T ss_pred ccHHHHhhccCcCCEEECCCCcCcccccc-cccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccchhh-HhhcC
Confidence 6 4555 4789999999999999988644 35899999999999999998889999999999999999998755 78899
Q ss_pred CCCCEEEccCCcCCCCCCCchhhhhc
Q 001143 257 HNLQNLNLQYNKLLSYCQVPSWICCN 282 (1141)
Q Consensus 257 ~~L~~L~Ls~N~L~~~~~iP~~~~~~ 282 (1141)
++|+.|+|++|++.|. .+|.++..+
T Consensus 237 ~~L~~L~l~~N~~~~~-~~~~~~~~~ 261 (317)
T 3o53_A 237 QNLEHFDLRGNGFHCG-TLRDFFSKN 261 (317)
T ss_dssp TTCCEEECTTCCCBHH-HHHHHHHTC
T ss_pred CCCCEEEccCCCccCc-CHHHHHhcc
Confidence 9999999999999852 255555543
No 304
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.93 E-value=8.7e-26 Score=259.58 Aligned_cols=250 Identities=20% Similarity=0.187 Sum_probs=208.5
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcC-chhhcCCCC
Q 001143 38 NDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLF-PSEVGNLLG 115 (1141)
Q Consensus 38 ~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~l-P~~~~~L~~ 115 (1141)
..++...+.|+++|+++.++.. +. ++|++|+|++|.|+.+|. .|.++++|+.|+|++|+|+.+ |..|.++++
T Consensus 28 ~~C~~~~~c~~~~~~l~~iP~~-~~-----~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~ 101 (353)
T 2z80_A 28 LSCDRNGICKGSSGSLNSIPSG-LT-----EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGS 101 (353)
T ss_dssp CEECTTSEEECCSTTCSSCCTT-CC-----TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred CCCCCCeEeeCCCCCccccccc-cc-----ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCC
Confidence 3445566799999999976543 22 589999999999999976 799999999999999999977 566999999
Q ss_pred CCEEEccCCCCCCCccc-ccCCCCCCEEECCCCCCCCCcccchh--hhcCCCCCcEEEccCC-CCCcc-CccccCCCCCC
Q 001143 116 LECLQIKISSPGVNGFA-LNKLKGLKELELSKVPPRPSVLTLLS--EIAGLKCLTKLSVCHF-SIRYL-PPEIGCLSNLE 190 (1141)
Q Consensus 116 L~~L~Ls~N~l~~~~~~-~~~L~~L~~L~Ls~N~ln~~~~~lp~--~l~~L~~L~~L~Ls~N-~L~~i-P~~l~~l~~L~ 190 (1141)
|++|+|++|.++.++.. +.++++|++|++++|.+. .+|. .+..+++|+.|++++| .++.+ |..+..+++|+
T Consensus 102 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~----~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 177 (353)
T 2z80_A 102 LEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK----TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLE 177 (353)
T ss_dssp CCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS----SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEE
T ss_pred CCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc----ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCC
Confidence 99999999998888865 899999999999997665 3444 6889999999999999 58877 45789999999
Q ss_pred EEEccCCccccc-cccccCCCCCCEEEccCCCCCcCCcCcc-CCCCCCEEeCCCCCCCCCCc------------------
Q 001143 191 QLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGLY-LLQRLENLDLSNNRLTSLGS------------------ 250 (1141)
Q Consensus 191 ~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP~~l~-~L~~L~~L~Ls~N~Lt~~~p------------------ 250 (1141)
.|+|++|+++.+ |..+..+++|+.|+|++|+++.+|..+. .+++|+.|+|++|++++.++
T Consensus 178 ~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~ 257 (353)
T 2z80_A 178 ELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFR 257 (353)
T ss_dssp EEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEE
T ss_pred EEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccc
Confidence 999999999965 8899999999999999999998887655 48999999999999998653
Q ss_pred -------------ccccCCCCCCEEEccCCcCCCCCCCchhh-hhcccCCCCCCCCCCcccCcc
Q 001143 251 -------------LDLCLMHNLQNLNLQYNKLLSYCQVPSWI-CCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 251 -------------~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~-~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
..+..+++|+.|+|++|+++. +|..+ ........+++.+|.+.|..+
T Consensus 258 ~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~---i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 258 NVKITDESLFQVMKLLNQISGLLELEFSRNQLKS---VPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp SCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC---CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred cccccCcchhhhHHHHhcccCCCEEECCCCCCCc---cCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 245677788888888888875 67664 455666677777777766554
No 305
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=5.2e-25 Score=244.18 Aligned_cols=212 Identities=26% Similarity=0.254 Sum_probs=153.9
Q ss_pred CccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECC
Q 001143 69 SVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELS 145 (1141)
Q Consensus 69 ~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls 145 (1141)
+|++|+|++|.|+.+|. .|.++++|++|+|++|+|+.++. .|.++++|++|+|++|.++.++ ..+.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 45555665555555543 45555556666666665554433 4555556666666655544443 345566666666666
Q ss_pred CCCCCCCcccchhhhcCCCCCcEEEccCCCCCc--cCccccCCCCCCEEEccCCcccccc-ccccCCCCCC----EEEcc
Q 001143 146 KVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY--LPPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALI----SLKVA 218 (1141)
Q Consensus 146 ~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~--iP~~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~----~L~Ls 218 (1141)
+|.+.... +..+..+++|+.|++++|+++. +|..+..+++|+.|+|++|+|+.+| ..+..+++|+ .|+|+
T Consensus 109 ~n~l~~~~---~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls 185 (276)
T 2z62_A 109 ETNLASLE---NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLS 185 (276)
T ss_dssp TSCCCCST---TCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECC
T ss_pred CCCccccC---chhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecC
Confidence 64443322 2246778889999999999986 6888999999999999999999775 5676666666 89999
Q ss_pred CCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcc
Q 001143 219 NNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNL 283 (1141)
Q Consensus 219 ~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l 283 (1141)
+|+|+.+|.......+|+.|+|++|+|+++++..|..+++|+.|+|++|+|+|.|+--.++..++
T Consensus 186 ~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l~~l~~~~ 250 (276)
T 2z62_A 186 LNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWL 250 (276)
T ss_dssp SSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTTTHHHHHHH
T ss_pred CCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCchHHHHHHH
Confidence 99999998888887899999999999999999888999999999999999999886434444333
No 306
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.93 E-value=3.1e-25 Score=284.13 Aligned_cols=273 Identities=19% Similarity=0.161 Sum_probs=182.9
Q ss_pred CCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCC-cccccCCCCCCCccEEEeecCCCCcc-CccccCCcC
Q 001143 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPL-IESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEK 92 (1141)
Q Consensus 15 ~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~-p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~ 92 (1141)
.++.+..|++..|+|+.+.+..|.++.+|++|||++|.+.+.+ |..| ++|++|++|+|++|.|+.+ |..|.++++
T Consensus 22 lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f---~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~ 98 (844)
T 3j0a_A 22 VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAF---RNLPNLRILDLGSSKIYFLHPDAFQGLFH 98 (844)
T ss_dssp SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTT---SSCTTCCEEECTTCCCCEECTTSSCSCSS
T ss_pred CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHh---cCCCCCCEEECCCCcCcccCHhHccCCcc
Confidence 4567999999999999999999999999999999999776665 5555 4559999999999999976 778999999
Q ss_pred CcEEEccCCCCCc-Cchh--hcCCCCCCEEEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCcccchhhhcCC--CC
Q 001143 93 LRNLKFFGNEINL-FPSE--VGNLLGLECLQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLTLLSEIAGL--KC 165 (1141)
Q Consensus 93 L~~L~Ls~N~L~~-lP~~--~~~L~~L~~L~Ls~N~l~~~~--~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L--~~ 165 (1141)
|++|+|++|.|+. +|.. |.+|++|+.|+|++|.+...+ ..|.++++|++|+|++|.+... .|..+..+ ++
T Consensus 99 L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~---~~~~l~~l~~~~ 175 (844)
T 3j0a_A 99 LFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLV---CEHELEPLQGKT 175 (844)
T ss_dssp CCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCC---CSGGGHHHHHCS
T ss_pred cCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCee---CHHHcccccCCc
Confidence 9999999999984 5665 899999999999999976653 4799999999999999776543 33344443 55
Q ss_pred CcEEEccCCCCC-ccCccccCCCC------CCEEEccCCccc-cccccccC-----------------------------
Q 001143 166 LTKLSVCHFSIR-YLPPEIGCLSN------LEQLDLSFNKMK-YLPTEICY----------------------------- 208 (1141)
Q Consensus 166 L~~L~Ls~N~L~-~iP~~l~~l~~------L~~L~Ls~N~L~-~iP~~l~~----------------------------- 208 (1141)
|+.|++++|.+. .+|..++.+++ |+.|+|++|.++ .+|..+..
T Consensus 176 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~ 255 (844)
T 3j0a_A 176 LSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDP 255 (844)
T ss_dssp SCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTG
T ss_pred cceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCC
Confidence 666666666555 33444443333 555555555443 22221111
Q ss_pred ---------CCCCCEEEccCCCCCcC-CcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchh
Q 001143 209 ---------LKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSW 278 (1141)
Q Consensus 209 ---------l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~ 278 (1141)
.++|+.|+|++|.++.+ |..+..+++|+.|+|++|+|++++|..|..+++|+.|+|++|+++.. .|..
T Consensus 256 ~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~--~~~~ 333 (844)
T 3j0a_A 256 DQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGEL--YSSN 333 (844)
T ss_dssp GGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCC--CSCS
T ss_pred ChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCcc--CHHH
Confidence 13455555555555533 34444455555555555555555555555555555555555555441 2334
Q ss_pred hhhcccCCCCCCCCCCc
Q 001143 279 ICCNLEGNGKDSSNDDF 295 (1141)
Q Consensus 279 ~~~~l~~~~l~~~~n~l 295 (1141)
+........++++.|.+
T Consensus 334 ~~~l~~L~~L~L~~N~i 350 (844)
T 3j0a_A 334 FYGLPKVAYIDLQKNHI 350 (844)
T ss_dssp CSSCTTCCEEECCSCCC
T ss_pred hcCCCCCCEEECCCCCC
Confidence 44444444444444443
No 307
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=3.1e-26 Score=275.68 Aligned_cols=229 Identities=17% Similarity=0.141 Sum_probs=187.1
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCC
Q 001143 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGL 116 (1141)
Q Consensus 37 f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L 116 (1141)
....++|++|||++|+|++.+|..|+.+ ++|++|+|++|.|+.+++ |..+++|++|+|++|.|+.+|.. ++|
T Consensus 30 ~~~~~~L~~L~Ls~n~l~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~l~~~----~~L 101 (487)
T 3oja_A 30 RQSAWNVKELDLSGNPLSQISAADLAPF---TKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQELLVG----PSI 101 (487)
T ss_dssp STTGGGCCEEECCSSCCCCCCGGGGTTC---TTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEEEEEC----TTC
T ss_pred cccCCCccEEEeeCCcCCCCCHHHHhCC---CCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCCCCCC----CCc
Confidence 3455589999999999998888777555 899999999999986655 88899999999999999877643 889
Q ss_pred CEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc-cCcccc-CCCCCCEEEc
Q 001143 117 ECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY-LPPEIG-CLSNLEQLDL 194 (1141)
Q Consensus 117 ~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~-iP~~l~-~l~~L~~L~L 194 (1141)
+.|+|++|.+..++. ..+++|+.|+|++|.+.. ..|..++.+++|+.|+|++|.|+. +|..+. .+++|+.|+|
T Consensus 102 ~~L~L~~N~l~~~~~--~~l~~L~~L~L~~N~l~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~L 176 (487)
T 3oja_A 102 ETLHAANNNISRVSC--SRGQGKKNIYLANNKITM---LRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (487)
T ss_dssp CEEECCSSCCCCEEE--CCCSSCEEEECCSSCCCS---GGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CEEECcCCcCCCCCc--cccCCCCEEECCCCCCCC---CCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEec
Confidence 999999999887764 357889999999966543 345577888999999999999995 466665 7899999999
Q ss_pred cCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001143 195 SFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1141)
Q Consensus 195 s~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1141)
++|.|+.+|. +..+++|+.|+|++|+|+.+|+.+..+++|+.|+|++|+|+++++ .+..+++|+.|+|++|++.|. .
T Consensus 177 s~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~-~l~~l~~L~~L~l~~N~l~c~-~ 253 (487)
T 3oja_A 177 QYNFIYDVKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEK-ALRFSQNLEHFDLRGNGFHCG-T 253 (487)
T ss_dssp TTSCCCEEEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECT-TCCCCTTCCEEECTTCCBCHH-H
T ss_pred CCCccccccc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccch-hhccCCCCCEEEcCCCCCcCc-c
Confidence 9999998864 446889999999999999998888889999999999999998765 688889999999999999852 2
Q ss_pred Cchhhhh
Q 001143 275 VPSWICC 281 (1141)
Q Consensus 275 iP~~~~~ 281 (1141)
+|.++..
T Consensus 254 ~~~~~~~ 260 (487)
T 3oja_A 254 LRDFFSK 260 (487)
T ss_dssp HHHHHTT
T ss_pred hHHHHHh
Confidence 5555543
No 308
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=258.09 Aligned_cols=243 Identities=19% Similarity=0.189 Sum_probs=206.9
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEEccCCCCCcCc-hhhcCCCCCCEE
Q 001143 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLKFFGNEINLFP-SEVGNLLGLECL 119 (1141)
Q Consensus 42 ~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~Ls~N~L~~lP-~~~~~L~~L~~L 119 (1141)
....+++++++|+.++.. +. ++|+.|+|++|+|+.++ ..|.++++|++|+|++|+|+.++ ..|.++++|+.|
T Consensus 44 ~~~~v~c~~~~l~~iP~~-~~-----~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L 117 (440)
T 3zyj_A 44 QFSKVICVRKNLREVPDG-IS-----TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTL 117 (440)
T ss_dssp TSCEEECCSCCCSSCCSC-CC-----TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEE
T ss_pred CCCEEEeCCCCcCcCCCC-CC-----CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEE
Confidence 467899999999976543 32 67999999999999886 57999999999999999999875 679999999999
Q ss_pred EccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC-CCCCccCc-cccCCCCCCEEEccC
Q 001143 120 QIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH-FSIRYLPP-EIGCLSNLEQLDLSF 196 (1141)
Q Consensus 120 ~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~-N~L~~iP~-~l~~l~~L~~L~Ls~ 196 (1141)
+|++|+++.++. .|..+++|++|+|++|.+. ...+..|.++++|+.|+|++ |.++.+|. .|..+++|+.|+|++
T Consensus 118 ~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~---~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~ 194 (440)
T 3zyj_A 118 ELFDNRLTTIPNGAFVYLSKLKELWLRNNPIE---SIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAM 194 (440)
T ss_dssp ECCSSCCSSCCTTTSCSCSSCCEEECCSCCCC---EECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTT
T ss_pred ECCCCcCCeeCHhHhhccccCceeeCCCCccc---ccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCC
Confidence 999999888875 6999999999999997654 22334788999999999999 56777766 689999999999999
Q ss_pred CccccccccccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCC
Q 001143 197 NKMKYLPTEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQV 275 (1141)
Q Consensus 197 N~L~~iP~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~i 275 (1141)
|+|+.+| .+..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|+. +
T Consensus 195 n~l~~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~ 270 (440)
T 3zyj_A 195 CNLREIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTL---L 270 (440)
T ss_dssp SCCSSCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCC---C
T ss_pred CcCcccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCc---c
Confidence 9999998 588999999999999999977 7788899999999999999999999999999999999999999997 4
Q ss_pred chh-hhhcccCCCCCCCCCCccc
Q 001143 276 PSW-ICCNLEGNGKDSSNDDFIS 297 (1141)
Q Consensus 276 P~~-~~~~l~~~~l~~~~n~l~~ 297 (1141)
|.. +..+..+..+++.+|.+.|
T Consensus 271 ~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 271 PHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CTTTTSSCTTCCEEECCSSCEEC
T ss_pred ChhHhccccCCCEEEcCCCCccC
Confidence 433 3334445555555555543
No 309
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.93 E-value=9.8e-27 Score=264.01 Aligned_cols=241 Identities=17% Similarity=0.119 Sum_probs=211.5
Q ss_pred CCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001143 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1141)
Q Consensus 16 ~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1141)
.++++.|.+..|+|+.+.+..|.++++|++|+|++|+|++.++ + ..+++|++|+|++|.|+.+|. +++|+.
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~---~~l~~L~~L~Ls~n~l~~l~~----~~~L~~ 103 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--L---ESLSTLRTLDLNNNYVQELLV----GPSIET 103 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--E---TTCTTCCEEECCSSEEEEEEE----CTTCCE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--h---hhcCCCCEEECcCCccccccC----CCCcCE
Confidence 3479999999999999999999999999999999999997664 4 555999999999999998863 379999
Q ss_pred EEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhh-cCCCCCcEEEccC
Q 001143 96 LKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEI-AGLKCLTKLSVCH 173 (1141)
Q Consensus 96 L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l-~~L~~L~~L~Ls~ 173 (1141)
|+|++|+|+.++.. .+++|+.|+|++|.++.++. .+..+++|++|+|++|.+.. ..|..+ ..+++|+.|+|++
T Consensus 104 L~l~~n~l~~~~~~--~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~---~~~~~~~~~l~~L~~L~L~~ 178 (317)
T 3o53_A 104 LHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT---VNFAELAASSDTLEHLNLQY 178 (317)
T ss_dssp EECCSSCCSEEEEC--CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCE---EEGGGGGGGTTTCCEEECTT
T ss_pred EECCCCccCCcCcc--ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCc---ccHHHHhhccCcCCEEECCC
Confidence 99999999987643 47899999999999887754 78899999999999976543 334455 4789999999999
Q ss_pred CCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCC-CCCccc
Q 001143 174 FSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLT-SLGSLD 252 (1141)
Q Consensus 174 N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt-~~~p~~ 252 (1141)
|+|+.+|.. ..+++|+.|+|++|+|+.+|..+..+++|+.|+|++|+|+.+|..+..+++|+.|+|++|+++ +.++.+
T Consensus 179 N~l~~~~~~-~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~ 257 (317)
T 3o53_A 179 NFIYDVKGQ-VVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRDF 257 (317)
T ss_dssp SCCCEEECC-CCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHHHHHHH
T ss_pred CcCcccccc-cccccCCEEECCCCcCCcchhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCcCHHHH
Confidence 999988654 469999999999999999998899999999999999999999999999999999999999999 777888
Q ss_pred ccCCCCCCEEEccCC-cCCC
Q 001143 253 LCLMHNLQNLNLQYN-KLLS 271 (1141)
Q Consensus 253 l~~L~~L~~L~Ls~N-~L~~ 271 (1141)
+..+++|+.|++++| .+++
T Consensus 258 ~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 258 FSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp HHTCHHHHHHHHHHHHHHHS
T ss_pred HhccccceEEECCCchhccC
Confidence 999999999999954 4554
No 310
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.92 E-value=4.4e-26 Score=274.32 Aligned_cols=236 Identities=17% Similarity=0.125 Sum_probs=209.0
Q ss_pred CCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCc
Q 001143 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLR 94 (1141)
Q Consensus 15 ~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~ 94 (1141)
..+++..|.+..|+|+.+.+..|.++++|++|+|++|.|++.+| ++.+++|++|+|++|.|+.+|.. ++|+
T Consensus 32 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-----l~~l~~L~~L~Ls~N~l~~l~~~----~~L~ 102 (487)
T 3oja_A 32 SAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-----LESLSTLRTLDLNNNYVQELLVG----PSIE 102 (487)
T ss_dssp TGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-----CTTCTTCCEEECCSSEEEEEEEC----TTCC
T ss_pred cCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-----cccCCCCCEEEecCCcCCCCCCC----CCcC
Confidence 44579999999999999999999999999999999999998765 45569999999999999988743 7899
Q ss_pred EEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhc-CCCCCcEEEcc
Q 001143 95 NLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIA-GLKCLTKLSVC 172 (1141)
Q Consensus 95 ~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~-~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~-~L~~L~~L~Ls 172 (1141)
.|+|++|.|+.+|.. .+++|+.|+|++|.++.+ |..+..+++|++|+|++|.+. +..|..+. .+++|+.|+|+
T Consensus 103 ~L~L~~N~l~~~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~---~~~~~~l~~~l~~L~~L~Ls 177 (487)
T 3oja_A 103 TLHAANNNISRVSCS--RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEID---TVNFAELAASSDTLEHLNLQ 177 (487)
T ss_dssp EEECCSSCCCCEEEC--CCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCC---EEEGGGGGGGTTTCCEEECT
T ss_pred EEECcCCcCCCCCcc--ccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCC---CcChHHHhhhCCcccEEecC
Confidence 999999999988653 578999999999997776 457899999999999996554 44566665 79999999999
Q ss_pred CCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCC-CCCcc
Q 001143 173 HFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLT-SLGSL 251 (1141)
Q Consensus 173 ~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt-~~~p~ 251 (1141)
+|.|+.+|. +..+++|+.|+|++|.|+.+|..+..+++|+.|+|++|.|+.||..+..+++|+.|+|++|.++ +.+|.
T Consensus 178 ~N~l~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~~~~~ 256 (487)
T 3oja_A 178 YNFIYDVKG-QVVFAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCGTLRD 256 (487)
T ss_dssp TSCCCEEEC-CCCCTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHHHHHH
T ss_pred CCccccccc-cccCCCCCEEECCCCCCCCCCHhHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCcchHH
Confidence 999998865 4569999999999999999998899999999999999999999999999999999999999998 66677
Q ss_pred cccCCCCCCEEEcc
Q 001143 252 DLCLMHNLQNLNLQ 265 (1141)
Q Consensus 252 ~l~~L~~L~~L~Ls 265 (1141)
++..++.|+.|+++
T Consensus 257 ~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 257 FFSKNQRVQTVAKQ 270 (487)
T ss_dssp HHTTCHHHHHHHHH
T ss_pred HHHhCCCCcEEecc
Confidence 88899999988887
No 311
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.92 E-value=2.9e-25 Score=247.36 Aligned_cols=249 Identities=20% Similarity=0.192 Sum_probs=207.7
Q ss_pred ccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEEEc
Q 001143 20 EKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNLKF 98 (1141)
Q Consensus 20 ~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L~L 98 (1141)
..+....+.|+.++... .++|++|+|++|+|++..+..|+.+ ++|++|+|++|.|+.+ |..|.++++|++|+|
T Consensus 14 ~~~~c~~~~l~~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 87 (285)
T 1ozn_A 14 VTTSCPQQGLQAVPVGI---PAASQRIFLHGNRISHVPAASFRAC---RNLTILWLHSNVLARIDAAAFTGLALLEQLDL 87 (285)
T ss_dssp CEEECCSSCCSSCCTTC---CTTCSEEECTTSCCCEECTTTTTTC---TTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred eEEEcCcCCcccCCcCC---CCCceEEEeeCCcCCccCHHHcccC---CCCCEEECCCCccceeCHhhcCCccCCCEEeC
Confidence 45777888898887543 4689999999999999887766554 9999999999999987 678999999999999
Q ss_pred cCCC-CCcC-chhhcCCCCCCEEEccCCCCCCC-cccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001143 99 FGNE-INLF-PSEVGNLLGLECLQIKISSPGVN-GFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1141)
Q Consensus 99 s~N~-L~~l-P~~~~~L~~L~~L~Ls~N~l~~~-~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1141)
++|. ++.+ |..|.++++|++|+|++|.+..+ +..+..+++|++|++++|.+... .+..|..+++|+.|++++|+
T Consensus 88 ~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~~~~l~~L~~L~l~~n~ 164 (285)
T 1ozn_A 88 SDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQAL---PDDTFRDLGNLTHLFLHGNR 164 (285)
T ss_dssp CSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCC---CTTTTTTCTTCCEEECCSSC
T ss_pred CCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCccccc---CHhHhccCCCccEEECCCCc
Confidence 9997 8887 67799999999999999997776 46789999999999999766432 23458899999999999999
Q ss_pred CCccCc-cccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCCc-CccCCCCCCEEeCCCCCCCCCCccc
Q 001143 176 IRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLD 252 (1141)
Q Consensus 176 L~~iP~-~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lt~~~p~~ 252 (1141)
|+.+|. .+..+++|+.|+|++|.|+.+ |..+..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++|.++...+..
T Consensus 165 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~ 244 (285)
T 1ozn_A 165 ISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR 244 (285)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH
T ss_pred ccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH
Confidence 998876 589999999999999999966 7889999999999999999998875 4888999999999999998655421
Q ss_pred ccCCCCCCEEEccCCcCCCCCCCchhhh
Q 001143 253 LCLMHNLQNLNLQYNKLLSYCQVPSWIC 280 (1141)
Q Consensus 253 l~~L~~L~~L~Ls~N~L~~~~~iP~~~~ 280 (1141)
.-+..|+.+..+.|.+.| ..|..+.
T Consensus 245 -~~~~~l~~~~~~~~~~~c--~~p~~l~ 269 (285)
T 1ozn_A 245 -PLWAWLQKFRGSSSEVPC--SLPQRLA 269 (285)
T ss_dssp -HHHHHHHHCCSEECCCBE--EESGGGT
T ss_pred -HHHHHHHhcccccCcccc--CCchHhC
Confidence 111234455577788877 5776544
No 312
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.92 E-value=1.9e-24 Score=265.19 Aligned_cols=292 Identities=21% Similarity=0.141 Sum_probs=220.8
Q ss_pred cCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCC
Q 001143 23 PSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGN 101 (1141)
Q Consensus 23 ~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N 101 (1141)
+-...+++.|+.+- -.++++|||++|+|+++.+..|..+ ++|++|+|++|+|+.||+ .|.+|++|++|+|++|
T Consensus 37 ~c~~~~l~~vP~~l---p~~~~~LdLs~N~i~~l~~~~f~~l---~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N 110 (635)
T 4g8a_A 37 QCMELNFYKIPDNL---PFSTKNLDLSFNPLRHLGSYSFFSF---PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGN 110 (635)
T ss_dssp ECTTSCCSSCCSSS---CTTCCEEECTTSCCCEECTTTTTTC---TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTC
T ss_pred ECCCCCcCccCCCC---CcCCCEEEeeCCCCCCCCHHHHhCC---CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCC
Confidence 34456788887532 2489999999999999888776555 999999999999999975 6999999999999999
Q ss_pred CCCcCch-hhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCcc
Q 001143 102 EINLFPS-EVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL 179 (1141)
Q Consensus 102 ~L~~lP~-~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~i 179 (1141)
+|+.+|. .|.+|++|++|+|++|+++.++. .|.++++|++|+|++|.+... .+|..++.+++|+.|++++|+|+.+
T Consensus 111 ~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~--~~~~~~~~l~~L~~L~L~~N~l~~~ 188 (635)
T 4g8a_A 111 PIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--KLPEYFSNLTNLEHLDLSSNKIQSI 188 (635)
T ss_dssp CCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--CCCGGGGGCTTCCEEECCSSCCCEE
T ss_pred cCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccC--CCchhhccchhhhhhcccCcccccc
Confidence 9999975 58999999999999999888775 699999999999999776432 3466777888888888888876533
Q ss_pred Cc-cc---------------------------------------------------------------------------
Q 001143 180 PP-EI--------------------------------------------------------------------------- 183 (1141)
Q Consensus 180 P~-~l--------------------------------------------------------------------------- 183 (1141)
+. .+
T Consensus 189 ~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~ 268 (635)
T 4g8a_A 189 YCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLE 268 (635)
T ss_dssp CGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCS
T ss_pred ccccccchhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccc
Confidence 21 00
Q ss_pred --------------------------------------------------------------------------------
Q 001143 184 -------------------------------------------------------------------------------- 183 (1141)
Q Consensus 184 -------------------------------------------------------------------------------- 183 (1141)
T Consensus 269 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l 348 (635)
T 4g8a_A 269 KFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKL 348 (635)
T ss_dssp CCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBC
T ss_pred cccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccc
Confidence
Q ss_pred -------------------cCCCCCCEEEccCCccc--------------------------------------------
Q 001143 184 -------------------GCLSNLEQLDLSFNKMK-------------------------------------------- 200 (1141)
Q Consensus 184 -------------------~~l~~L~~L~Ls~N~L~-------------------------------------------- 200 (1141)
..+++|+.|++++|.+.
T Consensus 349 ~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~~~~~~~~l~~L~~l~l~ 428 (635)
T 4g8a_A 349 KSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVITMSSNFLGLEQLEHLDFQ 428 (635)
T ss_dssp TTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEEECSCCTTCTTCCEEECT
T ss_pred hhhhhcccccccCCCCcccccccccccchhhccccccccccccchhhhhhhhhhhccccccccccccccccccccchhhh
Confidence 01234444555554432
Q ss_pred ------------------------------cc-cccccCCCCCCEEEccCCCCC--cCCcCccCCCCCCEEeCCCCCCCC
Q 001143 201 ------------------------------YL-PTEICYLKALISLKVANNKLV--ELPSGLYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 201 ------------------------------~i-P~~l~~l~~L~~L~Ls~N~L~--~IP~~l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
.+ |..+..+++|+.|+|++|++. .+|..+..+++|+.|+|++|+|++
T Consensus 429 ~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~ 508 (635)
T 4g8a_A 429 HSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQ 508 (635)
T ss_dssp TSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCE
T ss_pred hccccccccccccccccccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCC
Confidence 11 122334567889999999764 358888999999999999999999
Q ss_pred CCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcccccccCCCCCCCCCCCCcCCCCC-CCc
Q 001143 248 LGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAEMDVYEGPMLENDGNVSFSESDA-GSR 326 (1141)
Q Consensus 248 ~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~~~~~~~~~~l~~~~~~sf~~n~~-~~~ 326 (1141)
++|..|.++++|+.|+|++|+|++. .|..+..+..+..+++++|.+.+..|..-. .....-.....++|+. |.+
T Consensus 509 l~~~~f~~l~~L~~L~Ls~N~l~~l--~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~---~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 509 LSPTAFNSLSSLQVLNMSHNNFFSL--DTFPYKCLNSLQVLDYSLNHIMTSKKQELQ---HFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp ECTTTTTTCTTCCEEECTTSCCCBC--CCGGGTTCTTCCEEECTTSCCCBCCSSCTT---CCCTTCCEEECTTCCBCCSG
T ss_pred cChHHHcCCCCCCEEECCCCcCCCC--ChhHHhCCCCCCEEECCCCcCCCCCHHHHH---hhhCcCCEEEeeCCCCcccC
Confidence 9999999999999999999999983 355566777888999999999887664110 0011223345677776 754
Q ss_pred c
Q 001143 327 H 327 (1141)
Q Consensus 327 ~ 327 (1141)
.
T Consensus 584 ~ 584 (635)
T 4g8a_A 584 E 584 (635)
T ss_dssp G
T ss_pred C
Confidence 4
No 313
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.92 E-value=8.7e-26 Score=255.60 Aligned_cols=226 Identities=19% Similarity=0.096 Sum_probs=190.8
Q ss_pred cccccCCCCCccccCCCCCC--------CCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCC
Q 001143 19 KEKLPSEANKINNEKNGSVN--------DDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRY 90 (1141)
Q Consensus 19 l~~L~~~~N~i~~i~~~~f~--------~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L 90 (1141)
++.|.+..|+|+.+...... ++++|++|+|++|+|++.+|..+- ++.+++|++|+|++|+|+.+|..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~~~l~~L~~L~Ls~N~l~~~~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL-EATGPDLNILNLRNVSWATRDAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS-SCCSCCCSEEEEESCBCSSSSSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH-HhcCCCccEEEccCCCCcchhHHHHHH
Confidence 77888999999765433322 689999999999999998887541 245699999999999999888888877
Q ss_pred -----cCCcEEEccCCCCCcCc-hhhcCCCCCCEEEccCCCCCC---Cccc--ccCCCCCCEEECCCCCCCCCcccchhh
Q 001143 91 -----EKLRNLKFFGNEINLFP-SEVGNLLGLECLQIKISSPGV---NGFA--LNKLKGLKELELSKVPPRPSVLTLLSE 159 (1141)
Q Consensus 91 -----~~L~~L~Ls~N~L~~lP-~~~~~L~~L~~L~Ls~N~l~~---~~~~--~~~L~~L~~L~Ls~N~ln~~~~~lp~~ 159 (1141)
++|++|+|++|+|+.++ ..|+++++|+.|+|++|++.. .+.. +..+++|++|+|++|.+..........
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 223 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSAL 223 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHH
Confidence 89999999999999876 789999999999999999543 2333 389999999999998775433322344
Q ss_pred hcCCCCCcEEEccCCCCCccC--ccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCE
Q 001143 160 IAGLKCLTKLSVCHFSIRYLP--PEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLEN 237 (1141)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~iP--~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~ 237 (1141)
+..+++|+.|++++|+|+.++ ..+..+++|+.|+|++|+|+.+|..+. ++|+.|+|++|+|+.+|. +..+++|+.
T Consensus 224 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~--~~L~~L~Ls~N~l~~~p~-~~~l~~L~~ 300 (312)
T 1wwl_A 224 AAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLKQVPKGLP--AKLSVLDLSYNRLDRNPS-PDELPQVGN 300 (312)
T ss_dssp HHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCSSCCSSCC--SEEEEEECCSSCCCSCCC-TTTSCEEEE
T ss_pred HhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccChhhhhcc--CCceEEECCCCCCCCChh-HhhCCCCCE
Confidence 568899999999999999754 356778999999999999999999887 899999999999999987 899999999
Q ss_pred EeCCCCCCCCC
Q 001143 238 LDLSNNRLTSL 248 (1141)
Q Consensus 238 L~Ls~N~Lt~~ 248 (1141)
|+|++|+|++.
T Consensus 301 L~L~~N~l~~~ 311 (312)
T 1wwl_A 301 LSLKGNPFLDS 311 (312)
T ss_dssp EECTTCTTTCC
T ss_pred EeccCCCCCCC
Confidence 99999999864
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.92 E-value=1.4e-24 Score=258.18 Aligned_cols=225 Identities=22% Similarity=0.233 Sum_probs=200.4
Q ss_pred CCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCC
Q 001143 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKL 93 (1141)
Q Consensus 15 ~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L 93 (1141)
.++.+..|.+..|+|+.+.+..|.++++|++|+|++|+|++..+..|. ++++|++|+|++|+|+.+|.. |..+++|
T Consensus 73 ~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~---~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 149 (452)
T 3zyi_A 73 IPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFN---GLASLNTLELFDNWLTVIPSGAFEYLSKL 149 (452)
T ss_dssp CCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTT---TCTTCCEEECCSSCCSBCCTTTSSSCTTC
T ss_pred CCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhcc---CcccCCEEECCCCcCCccChhhhcccCCC
Confidence 345799999999999999999999999999999999999998887665 459999999999999999764 8899999
Q ss_pred cEEEccCCCCCcCch-hhcCCCCCCEEEccCCC-CCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEE
Q 001143 94 RNLKFFGNEINLFPS-EVGNLLGLECLQIKISS-PGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLS 170 (1141)
Q Consensus 94 ~~L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~-l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~ 170 (1141)
++|+|++|+|+.+|. .|.++++|+.|+|++|+ ++.++. .|.++++|++|+|++|.+... | .+..+++|+.|+
T Consensus 150 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~----~-~~~~l~~L~~L~ 224 (452)
T 3zyi_A 150 RELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM----P-NLTPLVGLEELE 224 (452)
T ss_dssp CEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC----C-CCTTCTTCCEEE
T ss_pred CEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc----c-cccccccccEEE
Confidence 999999999998866 58899999999999854 777765 699999999999999877543 3 478899999999
Q ss_pred ccCCCCCcc-CccccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCCcC-ccCCCCCCEEeCCCCCCCC
Q 001143 171 VCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 171 Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
|++|+|+.+ |..|..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|.+..
T Consensus 225 Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 304 (452)
T 3zyi_A 225 MSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWNC 304 (452)
T ss_dssp CTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEEC
T ss_pred CcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcCC
Confidence 999999977 66889999999999999999966 67799999999999999999988755 5679999999999998764
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=3.1e-24 Score=264.94 Aligned_cols=240 Identities=23% Similarity=0.204 Sum_probs=154.1
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1141)
++..|.+..|+|+.++. .+++|++|||++|+|+++.+ .+++|++|+|++|.|+.+|. .+++|+.|+
T Consensus 62 ~L~~L~L~~N~l~~lp~----~l~~L~~L~Ls~N~l~~lp~-------~l~~L~~L~Ls~N~l~~l~~---~l~~L~~L~ 127 (622)
T 3g06_A 62 HITTLVIPDNNLTSLPA----LPPELRTLEVSGNQLTSLPV-------LPPGLLELSIFSNPLTHLPA---LPSGLCKLW 127 (622)
T ss_dssp TCSEEEECSCCCSCCCC----CCTTCCEEEECSCCCSCCCC-------CCTTCCEEEECSCCCCCCCC---CCTTCCEEE
T ss_pred CCcEEEecCCCCCCCCC----cCCCCCEEEcCCCcCCcCCC-------CCCCCCEEECcCCcCCCCCC---CCCCcCEEE
Confidence 45555555555555544 34555555555555554322 22555555555555555554 344555555
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCC
Q 001143 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIR 177 (1141)
Q Consensus 98 Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~ 177 (1141)
|++|+|+.+|.. +++|+.|+|++|.++.+|. .+.+|+.|++++|.+.. +| ..+++|+.|++++|+|+
T Consensus 128 L~~N~l~~lp~~---l~~L~~L~Ls~N~l~~l~~---~~~~L~~L~L~~N~l~~----l~---~~~~~L~~L~Ls~N~l~ 194 (622)
T 3g06_A 128 IFGNQLTSLPVL---PPGLQELSVSDNQLASLPA---LPSELCKLWAYNNQLTS----LP---MLPSGLQELSVSDNQLA 194 (622)
T ss_dssp CCSSCCSCCCCC---CTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC----CC---CCCTTCCEEECCSSCCS
T ss_pred CCCCCCCcCCCC---CCCCCEEECcCCcCCCcCC---ccCCCCEEECCCCCCCC----Cc---ccCCCCcEEECCCCCCC
Confidence 555555555543 2555666666665555443 23455555555544432 22 23467777788888877
Q ss_pred ccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCC
Q 001143 178 YLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMH 257 (1141)
Q Consensus 178 ~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~ 257 (1141)
.+|.. +++|+.|+|++|.|+.+|.. +++|+.|+|++|+|+.|| ..+++|+.|+|++|+|+.+++ .++
T Consensus 195 ~l~~~---~~~L~~L~L~~N~l~~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~~lp~----~~~ 261 (622)
T 3g06_A 195 SLPTL---PSELYKLWAYNNRLTSLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLTSLPM----LPS 261 (622)
T ss_dssp CCCCC---CTTCCEEECCSSCCSSCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC----CCT
T ss_pred CCCCc---cchhhEEECcCCcccccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCCcCCc----ccc
Confidence 77653 36777777777777777653 367888888888888887 345778888888888887665 567
Q ss_pred CCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcc
Q 001143 258 NLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 258 ~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
+|+.|+|++|+|+. ||..+..+..+..+++.+|.+.+..+
T Consensus 262 ~L~~L~Ls~N~L~~---lp~~l~~l~~L~~L~L~~N~l~~~~~ 301 (622)
T 3g06_A 262 GLLSLSVYRNQLTR---LPESLIHLSSETTVNLEGNPLSERTL 301 (622)
T ss_dssp TCCEEECCSSCCCS---CCGGGGGSCTTCEEECCSCCCCHHHH
T ss_pred cCcEEeCCCCCCCc---CCHHHhhccccCEEEecCCCCCCcCH
Confidence 88888888888885 78877777777888888888876654
No 316
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.92 E-value=7e-24 Score=252.93 Aligned_cols=123 Identities=19% Similarity=0.116 Sum_probs=60.1
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEE
Q 001143 41 DDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQ 120 (1141)
Q Consensus 41 ~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~ 120 (1141)
++|++|+|++|++++ +|+ ++++++|++|+|++|+|+.+|..+ ++|++|+|++|+|+.+| .|+++++|+.|+
T Consensus 131 ~~L~~L~L~~n~l~~-lp~----~~~l~~L~~L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~ 201 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LPE----LQNSSFLKIIDVDNNSLKKLPDLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIY 201 (454)
T ss_dssp TTCCEEECCSSCCSS-CCC----CTTCTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEE
T ss_pred CCCCEEECcCCCCCC-Ccc----cCCCCCCCEEECCCCcCcccCCCc---ccccEEECcCCcCCcCc-cccCCCCCCEEE
Confidence 355555555555554 331 233355555555555555555432 24555555555555555 355555555555
Q ss_pred ccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccC
Q 001143 121 IKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLP 180 (1141)
Q Consensus 121 Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP 180 (1141)
+++|.+..+|..+ .+|++|++++|.+. .+| .++.+++|+.|++++|+++.+|
T Consensus 202 l~~N~l~~l~~~~---~~L~~L~l~~n~l~----~lp-~~~~l~~L~~L~l~~N~l~~l~ 253 (454)
T 1jl5_A 202 ADNNSLKKLPDLP---LSLESIVAGNNILE----ELP-ELQNLPFLTTIYADNNLLKTLP 253 (454)
T ss_dssp CCSSCCSSCCCCC---TTCCEEECCSSCCS----SCC-CCTTCTTCCEEECCSSCCSSCC
T ss_pred CCCCcCCcCCCCc---CcccEEECcCCcCC----ccc-ccCCCCCCCEEECCCCcCCccc
Confidence 5555544443322 24455555543332 223 2444444445555444444444
No 317
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.5e-24 Score=241.62 Aligned_cols=207 Identities=26% Similarity=0.237 Sum_probs=143.7
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCC
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSK 146 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~l-P~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~ 146 (1141)
++|+.|++++|.|+.+|..+. ++|+.|+|++|+|+.+ |..|.++++|+.|+|++|.++.++.. ..+++|++|+|++
T Consensus 10 ~~l~~l~~~~~~l~~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~~L~~L~Ls~ 86 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLPVLGTLDLSH 86 (290)
T ss_dssp TTCCEEECTTSCCSSCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCTTCCEEECCS
T ss_pred CCccEEECCCCCCCcCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCCcCCEEECCC
Confidence 444444444444444444332 2444444444444433 23344444444444444444443332 4455555555555
Q ss_pred CCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-cccCCCCCCEEEccCCcccccccc-ccCCCCCCEEEccCCCCCc
Q 001143 147 VPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVE 224 (1141)
Q Consensus 147 N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~ 224 (1141)
|.+. .+|..+..+++|+.|+|++|+|+.+|. .|..+++|+.|+|++|+|+.+|.. |..+++|+.|+|++|+|+.
T Consensus 87 N~l~----~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 87 NQLQ----SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp SCCS----SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSC
T ss_pred CcCC----cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCc
Confidence 4432 445566778889999999999998864 688999999999999999988754 6789999999999999999
Q ss_pred CCcCc-cCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhc
Q 001143 225 LPSGL-YLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCN 282 (1141)
Q Consensus 225 IP~~l-~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~ 282 (1141)
+|..+ ..+++|+.|+|++|+|+.+++ .+..+++|+.|+|++|+|.|.|.+.....|.
T Consensus 163 l~~~~~~~l~~L~~L~L~~N~l~~ip~-~~~~~~~L~~l~L~~Np~~C~c~~~~l~~wl 220 (290)
T 1p9a_G 163 LPAGLLNGLENLDTLLLQENSLYTIPK-GFFGSHLLPFAFLHGNPWLCNCEILYFRRWL 220 (290)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCT-TTTTTCCCSEEECCSCCBCCSGGGHHHHHHH
T ss_pred cCHHHhcCcCCCCEEECCCCcCCccCh-hhcccccCCeEEeCCCCccCcCccHHHHHHH
Confidence 98765 569999999999999998766 6777889999999999999988776544443
No 318
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=9.3e-24 Score=233.85 Aligned_cols=201 Identities=26% Similarity=0.352 Sum_probs=147.4
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcCchh-hcCCCCCCEE
Q 001143 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPSE-VGNLLGLECL 119 (1141)
Q Consensus 42 ~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~lP~~-~~~L~~L~~L 119 (1141)
+++.+++++|+|+.++ ..+. ++|++|+|++|+|+.+|. .|.++++|++|+|++|+|+.+|.. |.++++|++|
T Consensus 17 ~~~~l~~~~~~l~~ip-~~~~-----~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L 90 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIP-SNIP-----ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETL 90 (270)
T ss_dssp TTTEEECTTSCCSSCC-SCCC-----TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEE
T ss_pred CCCEEEccCCCCCccC-CCCC-----CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEE
Confidence 3455666666665432 2111 345566666666655543 455566666666666666555443 3445555555
Q ss_pred EccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-cccCCCCCCEEEccCCc
Q 001143 120 QIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNK 198 (1141)
Q Consensus 120 ~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~ 198 (1141)
+|++|.++.++ +..|..+++|+.|++++|+++.+|. .|..+++|++|+|++|+
T Consensus 91 ~l~~n~l~~~~--------------------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 91 WVTDNKLQALP--------------------------IGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp ECCSSCCCCCC--------------------------TTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCcCC--------------------------HhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCc
Confidence 55554433322 2346778889999999999997755 57899999999999999
Q ss_pred ccccccc-ccCCCCCCEEEccCCCCCcCCc-CccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001143 199 MKYLPTE-ICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1141)
Q Consensus 199 L~~iP~~-l~~l~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1141)
|+.+|.. |..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|.
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 9988755 7889999999999999998875 47789999999999999999999889999999999999999999886
No 319
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.92 E-value=1e-23 Score=260.33 Aligned_cols=230 Identities=22% Similarity=0.162 Sum_probs=199.1
Q ss_pred CCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCc
Q 001143 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLR 94 (1141)
Q Consensus 15 ~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~ 94 (1141)
..++++.|.+..|+|+.++. .+++|++|+|++|+|++..+ .+++|+.|+|++|+|+.||.. +++|+
T Consensus 79 ~l~~L~~L~Ls~N~l~~lp~----~l~~L~~L~Ls~N~l~~l~~-------~l~~L~~L~L~~N~l~~lp~~---l~~L~ 144 (622)
T 3g06_A 79 LPPELRTLEVSGNQLTSLPV----LPPGLLELSIFSNPLTHLPA-------LPSGLCKLWIFGNQLTSLPVL---PPGLQ 144 (622)
T ss_dssp CCTTCCEEEECSCCCSCCCC----CCTTCCEEEECSCCCCCCCC-------CCTTCCEEECCSSCCSCCCCC---CTTCC
T ss_pred cCCCCCEEEcCCCcCCcCCC----CCCCCCEEECcCCcCCCCCC-------CCCCcCEEECCCCCCCcCCCC---CCCCC
Confidence 34589999999999999876 78999999999999998654 237899999999999999975 47899
Q ss_pred EEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCC
Q 001143 95 NLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1141)
Q Consensus 95 ~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1141)
+|+|++|+|+.+|.. +++|+.|+|++|.++.+| ..+++|+.|++++|.+.. +|.. +++|+.|++++|
T Consensus 145 ~L~Ls~N~l~~l~~~---~~~L~~L~L~~N~l~~l~---~~~~~L~~L~Ls~N~l~~----l~~~---~~~L~~L~L~~N 211 (622)
T 3g06_A 145 ELSVSDNQLASLPAL---PSELCKLWAYNNQLTSLP---MLPSGLQELSVSDNQLAS----LPTL---PSELYKLWAYNN 211 (622)
T ss_dssp EEECCSSCCSCCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC----CCCC---CTTCCEEECCSS
T ss_pred EEECcCCcCCCcCCc---cCCCCEEECCCCCCCCCc---ccCCCCcEEECCCCCCCC----CCCc---cchhhEEECcCC
Confidence 999999999999863 578999999999999888 567899999999987754 3332 478999999999
Q ss_pred CCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCccccc
Q 001143 175 SIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLC 254 (1141)
Q Consensus 175 ~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~ 254 (1141)
.|+.+|.. +++|+.|+|++|+|+.+| ..+++|+.|+|++|+|+.||. .+++|+.|+|++|+|+.++ ..|.
T Consensus 212 ~l~~l~~~---~~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~~lp~---~~~~L~~L~Ls~N~L~~lp-~~l~ 281 (622)
T 3g06_A 212 RLTSLPAL---PSGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLTSLPM---LPSGLLSLSVYRNQLTRLP-ESLI 281 (622)
T ss_dssp CCSSCCCC---CTTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCCSCC-GGGG
T ss_pred cccccCCC---CCCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCCcCCc---ccccCcEEeCCCCCCCcCC-HHHh
Confidence 99999864 589999999999999998 456899999999999999997 6788999999999999765 5799
Q ss_pred CCCCCCEEEccCCcCCCCCCCchhhhhcc
Q 001143 255 LMHNLQNLNLQYNKLLSYCQVPSWICCNL 283 (1141)
Q Consensus 255 ~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l 283 (1141)
.+++|+.|+|++|+|++ .+|..+....
T Consensus 282 ~l~~L~~L~L~~N~l~~--~~~~~l~~L~ 308 (622)
T 3g06_A 282 HLSSETTVNLEGNPLSE--RTLQALREIT 308 (622)
T ss_dssp GSCTTCEEECCSCCCCH--HHHHHHHHHH
T ss_pred hccccCEEEecCCCCCC--cCHHHHHhcc
Confidence 99999999999999998 4666666544
No 320
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.91 E-value=6.1e-23 Score=244.85 Aligned_cols=203 Identities=21% Similarity=0.175 Sum_probs=150.6
Q ss_pred CCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcE
Q 001143 16 GPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRN 95 (1141)
Q Consensus 16 ~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~ 95 (1141)
++.++.|.+..|+|+.++. .+.+|++|+|++|++++.. .. .++|++|+|++|+|+.+| .|.++++|++
T Consensus 90 ~~~L~~L~l~~n~l~~lp~----~~~~L~~L~l~~n~l~~l~-~~------~~~L~~L~L~~n~l~~lp-~~~~l~~L~~ 157 (454)
T 1jl5_A 90 PPHLESLVASCNSLTELPE----LPQSLKSLLVDNNNLKALS-DL------PPLLEYLGVSNNQLEKLP-ELQNSSFLKI 157 (454)
T ss_dssp CTTCSEEECCSSCCSSCCC----CCTTCCEEECCSSCCSCCC-SC------CTTCCEEECCSSCCSSCC-CCTTCTTCCE
T ss_pred cCCCCEEEccCCcCCcccc----ccCCCcEEECCCCccCccc-CC------CCCCCEEECcCCCCCCCc-ccCCCCCCCE
Confidence 3568888888888888653 2478888888888887643 11 157888888888888888 5888888888
Q ss_pred EEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001143 96 LKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1141)
Q Consensus 96 L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1141)
|+|++|+|+.+|..+ .+|++|+|++|.++.+| .+..+++|++|++++|.+.. +|.. .++|+.|++++|.
T Consensus 158 L~l~~N~l~~lp~~~---~~L~~L~L~~n~l~~l~-~~~~l~~L~~L~l~~N~l~~----l~~~---~~~L~~L~l~~n~ 226 (454)
T 1jl5_A 158 IDVDNNSLKKLPDLP---PSLEFIAAGNNQLEELP-ELQNLPFLTAIYADNNSLKK----LPDL---PLSLESIVAGNNI 226 (454)
T ss_dssp EECCSSCCSCCCCCC---TTCCEEECCSSCCSSCC-CCTTCTTCCEEECCSSCCSS----CCCC---CTTCCEEECCSSC
T ss_pred EECCCCcCcccCCCc---ccccEEECcCCcCCcCc-cccCCCCCCEEECCCCcCCc----CCCC---cCcccEEECcCCc
Confidence 888888888887654 58888888888877777 58888888888888876643 2322 2478888888888
Q ss_pred CCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCC
Q 001143 176 IRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSL 248 (1141)
Q Consensus 176 L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~ 248 (1141)
++.+|. ++.+++|+.|+|++|+|+.+|.. +++|+.|+|++|+++.+|..+ ++|+.|+|++|+++++
T Consensus 227 l~~lp~-~~~l~~L~~L~l~~N~l~~l~~~---~~~L~~L~l~~N~l~~l~~~~---~~L~~L~ls~N~l~~l 292 (454)
T 1jl5_A 227 LEELPE-LQNLPFLTTIYADNNLLKTLPDL---PPSLEALNVRDNYLTDLPELP---QSLTFLDVSENIFSGL 292 (454)
T ss_dssp CSSCCC-CTTCTTCCEEECCSSCCSSCCSC---CTTCCEEECCSSCCSCCCCCC---TTCCEEECCSSCCSEE
T ss_pred CCcccc-cCCCCCCCEEECCCCcCCccccc---ccccCEEECCCCcccccCccc---CcCCEEECcCCccCcc
Confidence 888874 78888888888888888877753 356777777777777766532 5566666666666653
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.90 E-value=3.3e-23 Score=229.68 Aligned_cols=221 Identities=19% Similarity=0.174 Sum_probs=185.0
Q ss_pred ccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccC
Q 001143 22 LPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFG 100 (1141)
Q Consensus 22 L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~ 100 (1141)
+.....+++.++.... ++|++|+|++|+|++..+..|.. +++|++|+|++|.|+.++. .|.++++|++|+|++
T Consensus 12 ~~c~~~~l~~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~---l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~ 85 (276)
T 2z62_A 12 YQCMELNFYKIPDNLP---FSTKNLDLSFNPLRHLGSYSFFS---FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTG 85 (276)
T ss_dssp EECTTSCCSSCCSSSC---TTCCEEECTTCCCCEECTTTTTT---CTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred EEecCCCccccCCCCC---CCccEEECCCCcccccCHhHhcc---ccCCcEEECCCCcCCccCHHHccCCcCCCEEECCC
Confidence 3445566666665332 57999999999999888766654 4999999999999998865 689999999999999
Q ss_pred CCCCcCc-hhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCc
Q 001143 101 NEINLFP-SEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY 178 (1141)
Q Consensus 101 N~L~~lP-~~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~ 178 (1141)
|.|+.++ ..|.++++|+.|++++|.+..++. .+..+++|++|++++|.+... .+|..|.++++|+.|++++|+|+.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~--~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 86 NPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF--KLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp CCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC--CCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee--cCchhhccCCCCCEEECCCCCCCc
Confidence 9999775 668999999999999999777765 699999999999999766432 357789999999999999999998
Q ss_pred cCc-cccCCCCCC----EEEccCCccccccccccCCCCCCEEEccCCCCCcCCcC-ccCCCCCCEEeCCCCCCCCCCc
Q 001143 179 LPP-EIGCLSNLE----QLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 179 iP~-~l~~l~~L~----~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
+|. .+..+.+|+ .|+|++|.|+.+|.......+|+.|+|++|+|+.+|.. +..+++|+.|+|++|++++..+
T Consensus 164 ~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 164 IYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp ECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred CCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 754 666666666 89999999999988777777999999999999999866 4679999999999999986543
No 322
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=4.8e-23 Score=231.22 Aligned_cols=202 Identities=21% Similarity=0.225 Sum_probs=177.8
Q ss_pred CCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-ccccCCcCCcEEEccCCCCCcCchhhcCCC
Q 001143 36 SVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-KSVGRYEKLRNLKFFGNEINLFPSEVGNLL 114 (1141)
Q Consensus 36 ~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~ 114 (1141)
.+.++++++.|++++|+|+.+++..+ ++|+.|+|++|.|+.++ ..|.++++|+.|+|++|.|+.+|.. +.++
T Consensus 5 ~~~~l~~l~~l~~~~~~l~~ip~~~~------~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-~~l~ 77 (290)
T 1p9a_G 5 EVSKVASHLEVNCDKRNLTALPPDLP------KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-GTLP 77 (290)
T ss_dssp EEECSTTCCEEECTTSCCSSCCSCCC------TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-SCCT
T ss_pred cccccCCccEEECCCCCCCcCCCCCC------CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-CCCC
Confidence 46778899999999999997654322 67899999999999774 5799999999999999999988764 7899
Q ss_pred CCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-ccCCCCCCEEE
Q 001143 115 GLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLD 193 (1141)
Q Consensus 115 ~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~ 193 (1141)
+|+.|+|++|.++.+|..+..+++|++|+|++|.+... .|..|.++++|+.|+|++|+|+.+|.. |..+++|+.|+
T Consensus 78 ~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~l~~N~l~~l---~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 78 VLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSL---PLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp TCCEEECCSSCCSSCCCCTTTCTTCCEEECCSSCCCCC---CSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCEEECCCCcCCcCchhhccCCCCCEEECCCCcCccc---CHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 99999999999999999899999999999999766533 245789999999999999999988764 68899999999
Q ss_pred ccCCcccccccc-ccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCC
Q 001143 194 LSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 194 Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
|++|+|+.+|.. +..+++|+.|+|++|+|+.||..++.+.+|+.|+|++|.+..
T Consensus 155 L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C 209 (290)
T 1p9a_G 155 LANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLC 209 (290)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCC
T ss_pred CCCCcCCccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccC
Confidence 999999999865 577999999999999999999999999999999999999874
No 323
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.90 E-value=2.2e-23 Score=235.78 Aligned_cols=191 Identities=23% Similarity=0.311 Sum_probs=114.4
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N 147 (1141)
++|++|+|++|.++.+| .+..+++|++|+|++|.|+.++. +.++++|+.|+|++|.++.++ .+..+++|++|++++|
T Consensus 41 ~~L~~L~l~~~~i~~l~-~~~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l~~~~-~~~~l~~L~~L~l~~n 117 (308)
T 1h6u_A 41 DGITTLSAFGTGVTTIE-GVQYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPLKNVS-AIAGLQSIKTLDLTST 117 (308)
T ss_dssp HTCCEEECTTSCCCCCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCCSCCG-GGTTCTTCCEEECTTS
T ss_pred CCcCEEEeeCCCccCch-hhhccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcCCCch-hhcCCCCCCEEECCCC
Confidence 44444444444444443 34444444444444444444443 444444444444444444433 3444555555555554
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCc
Q 001143 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1141)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~ 227 (1141)
.+... + .+..+++|+.|++++|+++.+|. +..+++|+.|+|++|+|+.++. +..+++|+.|+|++|+|+.+|.
T Consensus 118 ~l~~~----~-~l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~ 190 (308)
T 1h6u_A 118 QITDV----T-PLAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNKISDISP 190 (308)
T ss_dssp CCCCC----G-GGTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCCGG
T ss_pred CCCCc----h-hhcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCccCcChh
Confidence 44321 2 25666677777777777776654 6667777777777777776655 6677777777777777776654
Q ss_pred CccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 001143 228 GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 228 ~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
+..+++|+.|+|++|+|+++++ +..+++|+.|+|++|++++
T Consensus 191 -l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 191 -LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp -GGGCTTCCEEECTTSCCCBCGG--GTTCTTCCEEEEEEEEEEC
T ss_pred -hcCCCCCCEEEccCCccCcccc--ccCCCCCCEEEccCCeeec
Confidence 6667777777777777776654 6677777777777777765
No 324
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.1e-23 Score=235.68 Aligned_cols=227 Identities=19% Similarity=0.124 Sum_probs=182.7
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCccc--cCCcCCcEEEccCCCCCc-Cc----hhhcC
Q 001143 41 DDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPKSV--GRYEKLRNLKFFGNEINL-FP----SEVGN 112 (1141)
Q Consensus 41 ~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~~l--~~L~~L~~L~Ls~N~L~~-lP----~~~~~ 112 (1141)
..++.|+++++.++...-..+..+..+++|++|+|++|.++ .+|..+ ..+++|++|+|++|.|+. +| ..+..
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~ 143 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWL 143 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTB
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhh
Confidence 35788999998886422111111122367999999999998 557777 899999999999999984 33 34568
Q ss_pred CCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccc-hhhhcCCCCCcEEEccCCCCCccCcc----ccCC
Q 001143 113 LLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTL-LSEIAGLKCLTKLSVCHFSIRYLPPE----IGCL 186 (1141)
Q Consensus 113 L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~l-p~~l~~L~~L~~L~Ls~N~L~~iP~~----l~~l 186 (1141)
+++|++|+|++|.+..++ ..+..+++|++|+|++|.+....+.. +..+..+++|++|+|++|+|+.+|.. +..+
T Consensus 144 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l 223 (310)
T 4glp_A 144 KPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAG 223 (310)
T ss_dssp CSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHT
T ss_pred ccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcC
Confidence 999999999999977665 67899999999999997653321111 12346889999999999999977653 4788
Q ss_pred CCCCEEEccCCccccc-cccccCC---CCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEE
Q 001143 187 SNLEQLDLSFNKMKYL-PTEICYL---KALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNL 262 (1141)
Q Consensus 187 ~~L~~L~Ls~N~L~~i-P~~l~~l---~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L 262 (1141)
++|++|+|++|+|+.+ |..++.+ ++|++|+|++|+|+.||..+. ++|+.|+|++|+|++++. +..+++|+.|
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L 299 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRAPQ--PDELPEVDNL 299 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSCCC--TTSCCCCSCE
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCCch--hhhCCCccEE
Confidence 9999999999999965 8888776 699999999999999998886 799999999999999843 7889999999
Q ss_pred EccCCcCCC
Q 001143 263 NLQYNKLLS 271 (1141)
Q Consensus 263 ~Ls~N~L~~ 271 (1141)
+|++|+|+.
T Consensus 300 ~L~~N~l~~ 308 (310)
T 4glp_A 300 TLDGNPFLV 308 (310)
T ss_dssp ECSSTTTSC
T ss_pred ECcCCCCCC
Confidence 999999975
No 325
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.89 E-value=4.4e-24 Score=259.99 Aligned_cols=201 Identities=19% Similarity=0.176 Sum_probs=144.6
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEecCCCCCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~~~~~~~~~ 888 (1141)
...++||+|+||.||+|.+.+..+++|....+..............++.+|+.++++++||||+++..++......
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~---- 414 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNK---- 414 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTT----
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCcc----
Confidence 4567999999999999998899999998655432222222223345568999999999999999655555443322
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccC
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKA 968 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~ 968 (1141)
|+||||++|++|.++++. +..|+.||+.||+|||++||+||||||+|||++.
T Consensus 415 ----------~lVmE~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~----- 466 (540)
T 3en9_A 415 ----------RIMMSYINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK----- 466 (540)
T ss_dssp ----------EEEEECCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS-----
T ss_pred ----------EEEEECCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC-----
Confidence 999999999999999753 5689999999999999999999999999999975
Q ss_pred CCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCC
Q 001143 969 DGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVP 1048 (1141)
Q Consensus 969 ~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~P 1048 (1141)
.+||+|||+|+............ ........||+.|||||++.... ..|+..+|+|+..+-..+.+.++.+
T Consensus 467 ----~~kL~DFGla~~~~~~~~~~~~~---~~~~~~~~GT~~y~APEv~~~~~--~~Y~~~~d~ws~vl~~l~~v~~r~r 537 (540)
T 3en9_A 467 ----DLYIIDFGLGKISNLDEDKAVDL---IVFKKAVLSTHHEKFDEIWERFL--EGYKSVYDRWEIILELMKDVERRAR 537 (540)
T ss_dssp ----SEEECCCTTCEECCCHHHHHHHH---HHHHHHHHHHCGGGHHHHHHHHH--HHHHHHCTTHHHHHHHHHHHHTCSC
T ss_pred ----eEEEEECccCEECCCccccccch---hhhhhhhcCCCCcCCHHHHHHHH--HHHHHHHhHHHHHHHHHHHHHhccc
Confidence 49999999998765422110000 00012456999999999997522 2466788999999988888877766
Q ss_pred CC
Q 001143 1049 YM 1050 (1141)
Q Consensus 1049 f~ 1050 (1141)
|.
T Consensus 538 Y~ 539 (540)
T 3en9_A 538 YV 539 (540)
T ss_dssp CC
T ss_pred cC
Confidence 63
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=7e-22 Score=218.75 Aligned_cols=199 Identities=23% Similarity=0.299 Sum_probs=163.1
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNL 96 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~L 96 (1141)
....+.+..++|+.++.... ++|+.|+|++|+|++..+..|+. +++|++|+|++|.|+.+|.. |.++++|++|
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~---l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L 90 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIP---ADTKKLDLQSNKLSSLPSKAFHR---LTKLRLLYLNDNKLQTLPAGIFKELKNLETL 90 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCC---TTCSEEECCSSCCSCCCTTSSSS---CTTCCEEECCSSCCSCCCTTTTSSCTTCCEE
T ss_pred CCCEEEccCCCCCccCCCCC---CCCCEEECcCCCCCeeCHHHhcC---CCCCCEEECCCCccCeeChhhhcCCCCCCEE
Confidence 45678899999999876443 68999999999999888766654 49999999999999999875 6889999999
Q ss_pred EccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001143 97 KFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1141)
Q Consensus 97 ~Ls~N~L~~lP~~-~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1141)
+|++|.|+.+|.. |.++++|+.|+|++|.++.++ +..|..+++|+.|+|++|.
T Consensus 91 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--------------------------~~~~~~l~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 91 WVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLP--------------------------PRVFDSLTKLTYLSLGYNE 144 (270)
T ss_dssp ECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCC--------------------------TTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCcCCHhHcccccCCCEEECCCCccCeeC--------------------------HHHhCcCcCCCEEECCCCc
Confidence 9999999988754 678888988888888765443 2245667778888888888
Q ss_pred CCccCcc-ccCCCCCCEEEccCCccccccc-cccCCCCCCEEEccCCCCCcCCcC-ccCCCCCCEEeCCCCCCCCC
Q 001143 176 IRYLPPE-IGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSL 248 (1141)
Q Consensus 176 L~~iP~~-l~~l~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~Lt~~ 248 (1141)
|+.+|.. |..+++|+.|+|++|+|+.+|. .|..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|.+...
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCC
Confidence 8877664 6788889999999998887764 477888999999999999888764 66788999999999987654
No 327
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.89 E-value=1.3e-22 Score=229.61 Aligned_cols=209 Identities=21% Similarity=0.237 Sum_probs=182.3
Q ss_pred CCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCC
Q 001143 24 SEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEI 103 (1141)
Q Consensus 24 ~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L 103 (1141)
+..++++.+ ..+.++++|+.|+|++|+++.. + .+ ..+++|++|+|++|.|+.+|. +..+++|++|+|++|+|
T Consensus 26 l~~~~~~~~--~~~~~l~~L~~L~l~~~~i~~l-~-~~---~~l~~L~~L~L~~n~i~~~~~-~~~l~~L~~L~L~~n~l 97 (308)
T 1h6u_A 26 AGKSNVTDT--VTQADLDGITTLSAFGTGVTTI-E-GV---QYLNNLIGLELKDNQITDLAP-LKNLTKITELELSGNPL 97 (308)
T ss_dssp TTCSSTTSE--ECHHHHHTCCEEECTTSCCCCC-T-TG---GGCTTCCEEECCSSCCCCCGG-GTTCCSCCEEECCSCCC
T ss_pred hCCCCcCce--ecHHHcCCcCEEEeeCCCccCc-h-hh---hccCCCCEEEccCCcCCCChh-HccCCCCCEEEccCCcC
Confidence 334444443 3455688999999999999874 3 24 445999999999999999987 99999999999999999
Q ss_pred CcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccc
Q 001143 104 NLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEI 183 (1141)
Q Consensus 104 ~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l 183 (1141)
+.+| .+..+++|+.|+|++|.++.++. +..+++|++|++++|.+... +. +..+++|+.|++++|+++.+|. +
T Consensus 98 ~~~~-~~~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~----~~-l~~l~~L~~L~l~~n~l~~~~~-l 169 (308)
T 1h6u_A 98 KNVS-AIAGLQSIKTLDLTSTQITDVTP-LAGLSNLQVLYLDLNQITNI----SP-LAGLTNLQYLSIGNAQVSDLTP-L 169 (308)
T ss_dssp SCCG-GGTTCTTCCEEECTTSCCCCCGG-GTTCTTCCEEECCSSCCCCC----GG-GGGCTTCCEEECCSSCCCCCGG-G
T ss_pred CCch-hhcCCCCCCEEECCCCCCCCchh-hcCCCCCCEEECCCCccCcC----cc-ccCCCCccEEEccCCcCCCChh-h
Confidence 9986 69999999999999999888875 89999999999999777543 32 7889999999999999998877 8
Q ss_pred cCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCc
Q 001143 184 GCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 184 ~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
..+++|+.|+|++|+|+.+|. +..+++|+.|+|++|+|+.+|+ +..+++|+.|+|++|++++.+.
T Consensus 170 ~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i~~~~~ 234 (308)
T 1h6u_A 170 ANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTITNQPV 234 (308)
T ss_dssp TTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEEECCCE
T ss_pred cCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCeeecCCe
Confidence 999999999999999998876 8899999999999999998874 8899999999999999998765
No 328
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=1.3e-21 Score=214.32 Aligned_cols=185 Identities=21% Similarity=0.266 Sum_probs=142.0
Q ss_pred CccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001143 69 SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1141)
Q Consensus 69 ~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N 147 (1141)
+.+++++++|.|+.+|..+. ++|+.|+|++|.|+.++. .|.++++|++|+|++|.++.++
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~----------------- 75 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLS----------------- 75 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCC-----------------
T ss_pred CCeEEecCCCCccccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccC-----------------
Confidence 45677777777777776654 467777777777776543 4666666666666666543322
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-cccCCCCCCEEEccCCcccccccc-ccCCCCCCEEEccCCCCCcC
Q 001143 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVEL 225 (1141)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~I 225 (1141)
|..|..+++|+.|+|++|+|+.+|. .|..+++|++|+|++|+|+.+|.. +..+++|+.|+|++|+|+.+
T Consensus 76 ---------~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 146 (251)
T 3m19_A 76 ---------AGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSI 146 (251)
T ss_dssp ---------TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred ---------HhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCcc
Confidence 2346667778888888888887754 568889999999999999988755 67899999999999999988
Q ss_pred Cc-CccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCC-CCCchhhhh
Q 001143 226 PS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSY-CQVPSWICC 281 (1141)
Q Consensus 226 P~-~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~-~~iP~~~~~ 281 (1141)
|. .+..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|.|. |.+.....|
T Consensus 147 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~l~~~ 204 (251)
T 3m19_A 147 PAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSRCEILYLSQW 204 (251)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTSTTHHHHHHH
T ss_pred CHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCccccHHHHHH
Confidence 76 578899999999999999999998899999999999999999986 554433333
No 329
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=1.7e-22 Score=228.29 Aligned_cols=203 Identities=17% Similarity=0.116 Sum_probs=170.2
Q ss_pred CCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCc-cC----ccccCCcCCcEEEccCCCCCcCc-hhhcCC
Q 001143 40 DDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNL-IP----KSVGRYEKLRNLKFFGNEINLFP-SEVGNL 113 (1141)
Q Consensus 40 l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~-iP----~~l~~L~~L~~L~Ls~N~L~~lP-~~~~~L 113 (1141)
+++|++|+|++|++++..|..+.. ..+++|++|+|++|.++. +| ..+..+++|++|+|++|+|+.+| ..|+++
T Consensus 90 ~~~L~~L~l~~n~l~~~~~~~~~~-~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l 168 (310)
T 4glp_A 90 YSRLKELTLEDLKITGTMPPLPLE-ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAF 168 (310)
T ss_dssp HSCCCEEEEESCCCBSCCCCCSSS-CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCC
T ss_pred cCceeEEEeeCCEeccchhhhhhh-ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccC
Confidence 456999999999999998876511 455999999999999984 33 24568999999999999999775 678999
Q ss_pred CCCCEEEccCCCCCC---Cc--ccccCCCCCCEEECCCCCCCCCcccchh-hhcCCCCCcEEEccCCCCCcc-CccccCC
Q 001143 114 LGLECLQIKISSPGV---NG--FALNKLKGLKELELSKVPPRPSVLTLLS-EIAGLKCLTKLSVCHFSIRYL-PPEIGCL 186 (1141)
Q Consensus 114 ~~L~~L~Ls~N~l~~---~~--~~~~~L~~L~~L~Ls~N~ln~~~~~lp~-~l~~L~~L~~L~Ls~N~L~~i-P~~l~~l 186 (1141)
++|++|+|++|++.. ++ ..+..+++|++|+|++|.+..... .+. .+..+++|++|+|++|+|+.+ |..++.+
T Consensus 169 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~ 247 (310)
T 4glp_A 169 PALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTG-VCAALAAAGVQPHSLDLSHNSLRATVNPSAPRC 247 (310)
T ss_dssp TTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHH-HHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSC
T ss_pred CCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHH-HHHHHHhcCCCCCEEECCCCCCCccchhhHHhc
Confidence 999999999999643 22 234789999999999987743322 233 357889999999999999976 8877776
Q ss_pred ---CCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCC
Q 001143 187 ---SNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 187 ---~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
++|++|+|++|+|+.+|..+. ++|+.|+|++|+|+.+|. +..+++|+.|+|++|+|+.
T Consensus 248 ~~~~~L~~L~Ls~N~l~~lp~~~~--~~L~~L~Ls~N~l~~~~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 248 MWSSALNSLNLSFAGLEQVPKGLP--AKLRVLDLSSNRLNRAPQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp CCCTTCCCEECCSSCCCSCCSCCC--SCCSCEECCSCCCCSCCC-TTSCCCCSCEECSSTTTSC
T ss_pred cCcCcCCEEECCCCCCCchhhhhc--CCCCEEECCCCcCCCCch-hhhCCCccEEECcCCCCCC
Confidence 699999999999999998886 799999999999999876 7889999999999999984
No 330
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=4e-22 Score=216.38 Aligned_cols=192 Identities=15% Similarity=0.139 Sum_probs=126.0
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC-CCccCc-cccCCcCCcEEEccC-CCCCcCch-hhcCCCCCC
Q 001143 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV-LNLIPK-SVGRYEKLRNLKFFG-NEINLFPS-EVGNLLGLE 117 (1141)
Q Consensus 42 ~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~-Lt~iP~-~l~~L~~L~~L~Ls~-N~L~~lP~-~~~~L~~L~ 117 (1141)
+|++|+|++|+|++..+..|+. +++|++|+|++|. ++.+|. .|.++++|++|+|++ |+|+.+|. .|.++++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~---l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~ 108 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSN---LPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLK 108 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTT---CTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCC
T ss_pred cccEEEEeCCcceEECHHHccC---CCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCC
Confidence 5566666666665555443332 3556666666664 555543 455566666666665 56655542 355555555
Q ss_pred EEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCc---EEEccCC-CCCccCc-cccCCCCCC-E
Q 001143 118 CLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLT---KLSVCHF-SIRYLPP-EIGCLSNLE-Q 191 (1141)
Q Consensus 118 ~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~---~L~Ls~N-~L~~iP~-~l~~l~~L~-~ 191 (1141)
.|+|++|.++.+| . |..+++|+ .|++++| +++.+|. .|..+++|+ .
T Consensus 109 ~L~l~~n~l~~lp---------------------------~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~ 160 (239)
T 2xwt_C 109 FLGIFNTGLKMFP---------------------------D-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLT 160 (239)
T ss_dssp EEEEEEECCCSCC---------------------------C-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEE
T ss_pred EEeCCCCCCcccc---------------------------c-cccccccccccEEECCCCcchhhcCcccccchhcceeE
Confidence 5555555544333 2 44555555 7888888 7887765 467788888 8
Q ss_pred EEccCCccccccccccCCCCCCEEEccCCC-CCcCCc-CccCC-CCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCC
Q 001143 192 LDLSFNKMKYLPTEICYLKALISLKVANNK-LVELPS-GLYLL-QRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1141)
Q Consensus 192 L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~-L~~IP~-~l~~L-~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N 267 (1141)
|+|++|+|+.+|......++|+.|+|++|+ |+.+|. .+..+ ++|+.|+|++|+|+++++. .+++|+.|++++|
T Consensus 161 L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 161 LKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSK---GLEHLKELIARNT 236 (239)
T ss_dssp EECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCT---TCTTCSEEECTTC
T ss_pred EEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccCChh---HhccCceeeccCc
Confidence 888888888887665555788888888884 887754 45667 8888888888888877764 5677888888776
No 331
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=2e-22 Score=223.46 Aligned_cols=192 Identities=24% Similarity=0.301 Sum_probs=97.7
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCC
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSK 146 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~ 146 (1141)
++|+.|++++|.++.++ .+..+++|++|+|++|.|+.++ .+.++++|++|+|++|.++.++. .+..+++|++|++++
T Consensus 41 ~~L~~L~l~~~~i~~~~-~l~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 118 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSVQ-GIQYLPNVRYLALGGNKLHDIS-ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVE 118 (272)
T ss_dssp TTCCEEECTTSCCCCCT-TGGGCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred cceeeeeeCCCCccccc-ccccCCCCcEEECCCCCCCCch-hhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCC
Confidence 55666666666665554 3555666666666666666543 45556666666666555444332 234444444444444
Q ss_pred CCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-ccCCCCCCEEEccCCcccccccc-ccCCCCCCEEEccCCCCCc
Q 001143 147 VPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVE 224 (1141)
Q Consensus 147 N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~ 224 (1141)
|.+. ...+..|..+++|+.|++++|+|+.+|.. +..+++|+.|+|++|+|+.+|.. ++.+++|+.|+|++|+|+.
T Consensus 119 n~l~---~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 119 NQLQ---SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp SCCC---CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CcCC---ccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 3322 11122344455555555555555544332 34555555555555555544332 3445555555555555554
Q ss_pred CCcC-ccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 001143 225 LPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 225 IP~~-l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
+|.. +..+++|+.|+|++|.+++. +++|++|++..|.++|
T Consensus 196 ~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~l~~~~n~~~g 236 (272)
T 3rfs_A 196 VPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSG 236 (272)
T ss_dssp CCTTTTTTCTTCCEEECCSSCBCCC-------TTTTHHHHHHHHHTGG
T ss_pred cCHHHHhCCcCCCEEEccCCCcccc-------CcHHHHHHHHHHhCCC
Confidence 4332 34455555555555544432 2345555555555555
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.87 E-value=7.8e-22 Score=214.06 Aligned_cols=180 Identities=17% Similarity=0.206 Sum_probs=140.2
Q ss_pred CccEEEeecCCCCccCc-cccCCcCCcEEEccCCC-CCcCch-hhcCCCCCCEEEccC-CCCCCCcccccCCCCCCEEEC
Q 001143 69 SVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNE-INLFPS-EVGNLLGLECLQIKI-SSPGVNGFALNKLKGLKELEL 144 (1141)
Q Consensus 69 ~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~-L~~lP~-~~~~L~~L~~L~Ls~-N~l~~~~~~~~~L~~L~~L~L 144 (1141)
+|++|+|++|+|+.+|. .|.++++|++|+|++|. |+.+|. .|.++++|++|+|++ |.++.++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~-------------- 97 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYID-------------- 97 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEEC--------------
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcC--------------
Confidence 45666666666665554 45566666666666664 555543 355555555555554 4433222
Q ss_pred CCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCC---EEEccCC-ccccccc-cccCCCCCC-EEEcc
Q 001143 145 SKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLE---QLDLSFN-KMKYLPT-EICYLKALI-SLKVA 218 (1141)
Q Consensus 145 s~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~---~L~Ls~N-~L~~iP~-~l~~l~~L~-~L~Ls 218 (1141)
+..|.++++|+.|++++|+++.+|. +..+++|+ +|+|++| +|+.+|. .|..+++|+ .|+|+
T Consensus 98 ------------~~~f~~l~~L~~L~l~~n~l~~lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~ 164 (239)
T 2xwt_C 98 ------------PDALKELPLLKFLGIFNTGLKMFPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLY 164 (239)
T ss_dssp ------------TTSEECCTTCCEEEEEEECCCSCCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECC
T ss_pred ------------HHHhCCCCCCCEEeCCCCCCccccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcC
Confidence 2467788999999999999999987 88889998 9999999 9998875 588999999 99999
Q ss_pred CCCCCcCCcCccCCCCCCEEeCCCCC-CCCCCcccccCC-CCCCEEEccCCcCCCCCCCchh
Q 001143 219 NNKLVELPSGLYLLQRLENLDLSNNR-LTSLGSLDLCLM-HNLQNLNLQYNKLLSYCQVPSW 278 (1141)
Q Consensus 219 ~N~L~~IP~~l~~L~~L~~L~Ls~N~-Lt~~~p~~l~~L-~~L~~L~Ls~N~L~~~~~iP~~ 278 (1141)
+|+|+.||...+..++|+.|+|++|+ |+++++..|..+ ++|+.|+|++|+++. +|..
T Consensus 165 ~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~---l~~~ 223 (239)
T 2xwt_C 165 NNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA---LPSK 223 (239)
T ss_dssp SCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC---CCCT
T ss_pred CCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc---CChh
Confidence 99999999887777899999999995 999999889999 999999999999987 6654
No 333
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1e-23 Score=245.28 Aligned_cols=237 Identities=19% Similarity=0.164 Sum_probs=193.5
Q ss_pred CCCCCCCCCCEEEccCCCCCCCCccccc-CCCCCCCccEEEeecCCCC----ccCccc-------cCCcCCcEEEccCCC
Q 001143 35 GSVNDDDDDSVIDVSGKTVDFPLIESYG-NRGGDNSVEGLYLYKNVLN----LIPKSV-------GRYEKLRNLKFFGNE 102 (1141)
Q Consensus 35 ~~f~~l~~L~~LdLs~N~Ls~~~p~~~~-~l~~L~~L~~L~Ls~N~Lt----~iP~~l-------~~L~~L~~L~Ls~N~ 102 (1141)
..+..+++|++|+|++|+|+...+..+. .+..+++|++|+|++|.+. .+|..+ ..+++|++|+|++|.
T Consensus 26 ~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~ 105 (386)
T 2ca6_A 26 AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNA 105 (386)
T ss_dssp HHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCC
T ss_pred HHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCc
Confidence 3456778999999999999877554432 2455699999999997665 445544 788999999999999
Q ss_pred CCc-----CchhhcCCCCCCEEEccCCCCCCCc-----ccccCC---------CCCCEEECCCCCCC-CCcccchhhhcC
Q 001143 103 INL-----FPSEVGNLLGLECLQIKISSPGVNG-----FALNKL---------KGLKELELSKVPPR-PSVLTLLSEIAG 162 (1141)
Q Consensus 103 L~~-----lP~~~~~L~~L~~L~Ls~N~l~~~~-----~~~~~L---------~~L~~L~Ls~N~ln-~~~~~lp~~l~~ 162 (1141)
|+. +|..+.++++|+.|+|++|.++..+ ..+..+ ++|++|+|++|.+. .....+...+..
T Consensus 106 l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~ 185 (386)
T 2ca6_A 106 FGPTAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 185 (386)
T ss_dssp CCTTTHHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHh
Confidence 986 7888999999999999999976433 234444 89999999998765 223333367888
Q ss_pred CCCCcEEEccCCCCC------ccCccccCCCCCCEEEccCCcc-----ccccccccCCCCCCEEEccCCCCCc-----CC
Q 001143 163 LKCLTKLSVCHFSIR------YLPPEIGCLSNLEQLDLSFNKM-----KYLPTEICYLKALISLKVANNKLVE-----LP 226 (1141)
Q Consensus 163 L~~L~~L~Ls~N~L~------~iP~~l~~l~~L~~L~Ls~N~L-----~~iP~~l~~l~~L~~L~Ls~N~L~~-----IP 226 (1141)
+++|+.|+|++|+|+ .+|..+..+++|+.|+|++|.| ..+|..+..+++|+.|+|++|.|+. +|
T Consensus 186 ~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 265 (386)
T 2ca6_A 186 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVV 265 (386)
T ss_dssp CTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHH
T ss_pred CCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHH
Confidence 999999999999998 2354788999999999999999 4688999999999999999999983 47
Q ss_pred cCc--cCCCCCCEEeCCCCCCCC----CCcccc-cCCCCCCEEEccCCcCCC
Q 001143 227 SGL--YLLQRLENLDLSNNRLTS----LGSLDL-CLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 227 ~~l--~~L~~L~~L~Ls~N~Lt~----~~p~~l-~~L~~L~~L~Ls~N~L~~ 271 (1141)
..+ +.+++|+.|+|++|+|++ ..|..+ .++++|+.|+|++|++++
T Consensus 266 ~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 266 DAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCT
T ss_pred HHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCc
Confidence 777 448999999999999998 345455 678999999999999997
No 334
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=8.2e-22 Score=240.77 Aligned_cols=188 Identities=19% Similarity=0.236 Sum_probs=106.7
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEc
Q 001143 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQI 121 (1141)
Q Consensus 42 ~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~L 121 (1141)
+|+.|+|++|+|++ +|..+ + ++|++|+|++|+|+.|| ..+++|++|+|++|+|+.||. |.+ +|+.|+|
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l--~---~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNL--P---PQITVLEITQNALISLP---ELPASLEYLDACDNRLSTLPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCC--C---TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSCCCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCc-cCHhH--c---CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCCcch-hhc--CCCEEEC
Confidence 55555555555554 22211 1 44555555555555555 234455555555555555554 433 4555555
Q ss_pred cCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCcccc
Q 001143 122 KISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKY 201 (1141)
Q Consensus 122 s~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~ 201 (1141)
++|.++.+| . .+++|+.|+|++|+|+.+|. .+++|+.|+|++|+|+.
T Consensus 128 s~N~l~~lp---------------------------~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~ 174 (571)
T 3cvr_A 128 DNNQLTMLP---------------------------E---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTF 174 (571)
T ss_dssp CSSCCSCCC---------------------------C---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSC
T ss_pred CCCcCCCCC---------------------------C---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCC
Confidence 444444333 2 35566666666666666665 45666666777776666
Q ss_pred ccccccCCCCCCEEEccCCCCCcCCcCccCCCCC-------CEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001143 202 LPTEICYLKALISLKVANNKLVELPSGLYLLQRL-------ENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1141)
Q Consensus 202 iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L-------~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1141)
+|. |. ++|+.|+|++|+|+.||. +.. +| +.|+|++|+|+.+++ .+..+++|+.|+|++|+|++ .
T Consensus 175 lp~-l~--~~L~~L~Ls~N~L~~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~lp~-~l~~l~~L~~L~L~~N~l~~--~ 245 (571)
T 3cvr_A 175 LPE-LP--ESLEALDVSTNLLESLPA-VPV--RNHHSEETEIFFRCRENRITHIPE-NILSLDPTCTIILEDNPLSS--R 245 (571)
T ss_dssp CCC-CC--TTCCEEECCSSCCSSCCC-CC----------CCEEEECCSSCCCCCCG-GGGGSCTTEEEECCSSSCCH--H
T ss_pred cch-hh--CCCCEEECcCCCCCchhh-HHH--hhhcccccceEEecCCCcceecCH-HHhcCCCCCEEEeeCCcCCC--c
Confidence 666 44 667777777777666666 443 45 777777777776544 45557777777777777766 4
Q ss_pred Cchhhhhcc
Q 001143 275 VPSWICCNL 283 (1141)
Q Consensus 275 iP~~~~~~l 283 (1141)
+|..+....
T Consensus 246 ~p~~l~~l~ 254 (571)
T 3cvr_A 246 IRESLSQQT 254 (571)
T ss_dssp HHHHHHHHH
T ss_pred CHHHHHHhh
Confidence 566555443
No 335
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.86 E-value=1.5e-21 Score=216.58 Aligned_cols=200 Identities=22% Similarity=0.238 Sum_probs=174.3
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N 147 (1141)
.++..+++..+.++.+ ..+..+++|+.|++++|.++.++. +..+++|++|+|++|.+..++ .+..+++|++|++++|
T Consensus 19 ~~l~~l~l~~~~~~~~-~~~~~l~~L~~L~l~~~~i~~~~~-l~~l~~L~~L~l~~n~l~~~~-~l~~l~~L~~L~L~~n 95 (272)
T 3rfs_A 19 AETIKANLKKKSVTDA-VTQNELNSIDQIIANNSDIKSVQG-IQYLPNVRYLALGGNKLHDIS-ALKELTNLTYLILTGN 95 (272)
T ss_dssp HHHHHHHHTCSCTTSE-ECHHHHTTCCEEECTTSCCCCCTT-GGGCTTCCEEECTTSCCCCCG-GGTTCTTCCEEECTTS
T ss_pred HHHHHHHhcCcccccc-cccccccceeeeeeCCCCcccccc-cccCCCCcEEECCCCCCCCch-hhcCCCCCCEEECCCC
Confidence 4567778888877755 346678899999999999998864 889999999999999988765 7899999999999997
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-ccCCCCCCEEEccCCcccccccc-ccCCCCCCEEEccCCCCCcC
Q 001143 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVEL 225 (1141)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~I 225 (1141)
.+.. ..+..|..+++|+.|++++|+++.+|.. +..+++|++|+|++|+|+.+|.. +..+++|+.|+|++|+|+.+
T Consensus 96 ~l~~---~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 172 (272)
T 3rfs_A 96 QLQS---LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSL 172 (272)
T ss_dssp CCCC---CCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCC
T ss_pred ccCc---cChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCcc
Confidence 6643 3344678999999999999999988664 78999999999999999988654 68899999999999999988
Q ss_pred CcC-ccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCC
Q 001143 226 PSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYC 273 (1141)
Q Consensus 226 P~~-l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~ 273 (1141)
|.. +..+++|+.|+|++|+|+++++..+..+++|+.|+|++|+|.|.|
T Consensus 173 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 221 (272)
T 3rfs_A 173 PEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTC 221 (272)
T ss_dssp CTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccccC
Confidence 655 578999999999999999999988999999999999999999843
No 336
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=3.3e-21 Score=235.48 Aligned_cols=182 Identities=22% Similarity=0.224 Sum_probs=143.8
Q ss_pred CCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEc
Q 001143 92 KLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV 171 (1141)
Q Consensus 92 ~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~L 171 (1141)
+|+.|+|++|.|+.||..+. ++|+.|+|++|.++.+| ..+++|++|+|++|.+.. +|. +.+ +|+.|+|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~--~~L~~L~Ls~N~l~~ip---~~l~~L~~L~Ls~N~l~~----ip~-l~~--~L~~L~L 127 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLP--PQITVLEITQNALISLP---ELPASLEYLDACDNRLST----LPE-LPA--SLKHLDV 127 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCC--TTCSEEECCSSCCSCCC---CCCTTCCEEECCSSCCSC----CCC-CCT--TCCEEEC
T ss_pred CccEEEeCCCCCCccCHhHc--CCCCEEECcCCCCcccc---cccCCCCEEEccCCCCCC----cch-hhc--CCCEEEC
Confidence 56666666666666665542 56666666666666555 345667777777755543 344 443 8999999
Q ss_pred cCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcc
Q 001143 172 CHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSL 251 (1141)
Q Consensus 172 s~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~ 251 (1141)
++|+|+.+|. .+++|+.|+|++|+|+.||. .+++|+.|+|++|+|+.||. +. ++|+.|+|++|+|+.+++
T Consensus 128 s~N~l~~lp~---~l~~L~~L~Ls~N~l~~lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~~lp~- 197 (571)
T 3cvr_A 128 DNNQLTMLPE---LPALLEYINADNNQLTMLPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLESLPA- 197 (571)
T ss_dssp CSSCCSCCCC---CCTTCCEEECCSSCCSCCCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCSSCCC-
T ss_pred CCCcCCCCCC---cCccccEEeCCCCccCcCCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCCchhh-
Confidence 9999999988 68999999999999999987 67899999999999999998 66 899999999999997765
Q ss_pred cccCCCCC-------CEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCccc
Q 001143 252 DLCLMHNL-------QNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSAE 301 (1141)
Q Consensus 252 ~l~~L~~L-------~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~~ 301 (1141)
|.. +| +.|+|++|+|+. ||..+..+..+..+++++|.+.+..|.
T Consensus 198 -~~~--~L~~~~~~L~~L~Ls~N~l~~---lp~~l~~l~~L~~L~L~~N~l~~~~p~ 248 (571)
T 3cvr_A 198 -VPV--RNHHSEETEIFFRCRENRITH---IPENILSLDPTCTIILEDNPLSSRIRE 248 (571)
T ss_dssp -CC----------CCEEEECCSSCCCC---CCGGGGGSCTTEEEECCSSSCCHHHHH
T ss_pred -HHH--hhhcccccceEEecCCCccee---cCHHHhcCCCCCEEEeeCCcCCCcCHH
Confidence 544 67 999999999996 999888888889999999999887653
No 337
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.84 E-value=5.6e-23 Score=243.60 Aligned_cols=252 Identities=17% Similarity=0.097 Sum_probs=144.3
Q ss_pred CCcccccCCCCCccccCCCCC-CCCC----CCCEEEccCCCCCC----CCcccccCCCCCCCccEEEeecCCCCcc-Ccc
Q 001143 17 PIKEKLPSEANKINNEKNGSV-NDDD----DDSVIDVSGKTVDF----PLIESYGNRGGDNSVEGLYLYKNVLNLI-PKS 86 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f-~~l~----~L~~LdLs~N~Ls~----~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~ 86 (1141)
+.++.|.+..|+|+......+ ..+. +|++|+|++|+|+. .++..+. .+++|++|+|++|.|+.. +..
T Consensus 56 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~---~~~~L~~L~Ls~n~i~~~~~~~ 132 (461)
T 1z7x_W 56 PALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLR---TLPTLQELHLSDNLLGDAGLQL 132 (461)
T ss_dssp TTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTT---SCTTCCEEECCSSBCHHHHHHH
T ss_pred CCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHc---cCCceeEEECCCCcCchHHHHH
Confidence 357777777777765433222 2233 57777777777763 3344443 337777777777777632 222
Q ss_pred c-----cCCcCCcEEEccCCCCCc-----CchhhcCCCCCCEEEccCCCCCCCcc-ccc-----CCCCCCEEECCCCCCC
Q 001143 87 V-----GRYEKLRNLKFFGNEINL-----FPSEVGNLLGLECLQIKISSPGVNGF-ALN-----KLKGLKELELSKVPPR 150 (1141)
Q Consensus 87 l-----~~L~~L~~L~Ls~N~L~~-----lP~~~~~L~~L~~L~Ls~N~l~~~~~-~~~-----~L~~L~~L~Ls~N~ln 150 (1141)
+ ..+++|+.|+|++|.|+. ++..+..+++|+.|+|++|.++..+. .+. .+++|++|++++|.+.
T Consensus 133 l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~ 212 (461)
T 1z7x_W 133 LCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVT 212 (461)
T ss_dssp HHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCB
T ss_pred HHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCc
Confidence 2 224567777777777763 34556666777777777776544321 121 2456777777775543
Q ss_pred CCc-ccchhhhcCCCCCcEEEccCCCCCcc------CccccCCCCCCEEEccCCcccc-----ccccccCCCCCCEEEcc
Q 001143 151 PSV-LTLLSEIAGLKCLTKLSVCHFSIRYL------PPEIGCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKVA 218 (1141)
Q Consensus 151 ~~~-~~lp~~l~~L~~L~~L~Ls~N~L~~i------P~~l~~l~~L~~L~Ls~N~L~~-----iP~~l~~l~~L~~L~Ls 218 (1141)
... ..++..+..+++|+.|++++|.++.. +..+..+++|+.|+|++|.|+. ++..+..+++|+.|+|+
T Consensus 213 ~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls 292 (461)
T 1z7x_W 213 SDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLA 292 (461)
T ss_dssp TTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECT
T ss_pred HHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECC
Confidence 221 12455566666777777777766632 1122346667777777777664 56666666667777777
Q ss_pred CCCCCc-----CCcCccC-CCCCCEEeCCCCCCCCC----CcccccCCCCCCEEEccCCcCCC
Q 001143 219 NNKLVE-----LPSGLYL-LQRLENLDLSNNRLTSL----GSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 219 ~N~L~~-----IP~~l~~-L~~L~~L~Ls~N~Lt~~----~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
+|.++. ++..+.. .++|+.|+|++|.+++. .+..+..+++|+.|+|++|+++.
T Consensus 293 ~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~ 355 (461)
T 1z7x_W 293 GNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLED 355 (461)
T ss_dssp TCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHH
T ss_pred CCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCcccc
Confidence 776652 1222221 24666666666666654 23344555666666666666554
No 338
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.84 E-value=2.9e-22 Score=233.06 Aligned_cols=234 Identities=15% Similarity=0.113 Sum_probs=192.7
Q ss_pred CCcccccCCCCCccccCC----CCCCCCCCCCEEEccCC---CCCCCCccccc----CCCCCCCccEEEeecCCCCc---
Q 001143 17 PIKEKLPSEANKINNEKN----GSVNDDDDDSVIDVSGK---TVDFPLIESYG----NRGGDNSVEGLYLYKNVLNL--- 82 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~----~~f~~l~~L~~LdLs~N---~Ls~~~p~~~~----~l~~L~~L~~L~Ls~N~Lt~--- 82 (1141)
+.++.|.+..|+|+.... ..|..+++|++|+|++| ++++.+|..+. .+..+++|++|+|++|.|+.
T Consensus 32 ~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~ 111 (386)
T 2ca6_A 32 DSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQ 111 (386)
T ss_dssp SCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTH
T ss_pred CCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHH
Confidence 468999999999988754 34889999999999996 45556665442 12456999999999999986
Q ss_pred --cCccccCCcCCcEEEccCCCCCc-----CchhhcCC---------CCCCEEEccCCCCC--CCc---ccccCCCCCCE
Q 001143 83 --IPKSVGRYEKLRNLKFFGNEINL-----FPSEVGNL---------LGLECLQIKISSPG--VNG---FALNKLKGLKE 141 (1141)
Q Consensus 83 --iP~~l~~L~~L~~L~Ls~N~L~~-----lP~~~~~L---------~~L~~L~Ls~N~l~--~~~---~~~~~L~~L~~ 141 (1141)
+|..|..+++|++|+|++|.|+. ++..+..+ ++|+.|+|++|.++ .++ ..+..+++|++
T Consensus 112 ~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~ 191 (386)
T 2ca6_A 112 EPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHT 191 (386)
T ss_dssp HHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCE
T ss_pred HHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCE
Confidence 78889999999999999999973 33444445 99999999999986 334 35778999999
Q ss_pred EECCCCCCC--CCcccchhhhcCCCCCcEEEccCCCC-----CccCccccCCCCCCEEEccCCcccc-----ccccc--c
Q 001143 142 LELSKVPPR--PSVLTLLSEIAGLKCLTKLSVCHFSI-----RYLPPEIGCLSNLEQLDLSFNKMKY-----LPTEI--C 207 (1141)
Q Consensus 142 L~Ls~N~ln--~~~~~lp~~l~~L~~L~~L~Ls~N~L-----~~iP~~l~~l~~L~~L~Ls~N~L~~-----iP~~l--~ 207 (1141)
|+|++|.+. +....+|..+..+++|+.|+|++|.| ..+|..+..+++|+.|+|++|.|+. +|..+ +
T Consensus 192 L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~ 271 (386)
T 2ca6_A 192 VKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKL 271 (386)
T ss_dssp EECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTC
T ss_pred EECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhc
Confidence 999997764 21123444788999999999999999 4578888999999999999999983 57777 4
Q ss_pred CCCCCCEEEccCCCCCc-----CCcCc-cCCCCCCEEeCCCCCCCCCCc
Q 001143 208 YLKALISLKVANNKLVE-----LPSGL-YLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 208 ~l~~L~~L~Ls~N~L~~-----IP~~l-~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
.+++|+.|+|++|.|+. +|..+ .++++|+.|+|++|++++..+
T Consensus 272 ~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 272 ENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp SSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred cCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 49999999999999996 89888 568999999999999998875
No 339
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.84 E-value=7e-22 Score=228.22 Aligned_cols=247 Identities=13% Similarity=0.119 Sum_probs=190.4
Q ss_pred ccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCc----ccccCCCCCC-CccEEEeecCCCCcc-CccccCC-----
Q 001143 22 LPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLI----ESYGNRGGDN-SVEGLYLYKNVLNLI-PKSVGRY----- 90 (1141)
Q Consensus 22 L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p----~~~~~l~~L~-~L~~L~Ls~N~Lt~i-P~~l~~L----- 90 (1141)
+.+..|++++..+..+....+|++|||++|+|++..+ ..+..+ + +|++|+|++|.|+.. +..|..+
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~---~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~ 79 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANT---PASVTSLNLSGNSLGFKNSDELVQILAAIP 79 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTC---CTTCCEEECCSSCGGGSCHHHHHHHHHTSC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhC---CCceeEEECcCCCCCHHHHHHHHHHHhccC
Confidence 3466788888777777777789999999999988776 555444 7 899999999999865 4456554
Q ss_pred cCCcEEEccCCCCCcCc-hh----hcCC-CCCCEEEccCCCCCCCcc-c----ccC-CCCCCEEECCCCCCCCCc-ccch
Q 001143 91 EKLRNLKFFGNEINLFP-SE----VGNL-LGLECLQIKISSPGVNGF-A----LNK-LKGLKELELSKVPPRPSV-LTLL 157 (1141)
Q Consensus 91 ~~L~~L~Ls~N~L~~lP-~~----~~~L-~~L~~L~Ls~N~l~~~~~-~----~~~-L~~L~~L~Ls~N~ln~~~-~~lp 157 (1141)
++|++|+|++|.|+..+ .. +..+ ++|+.|+|++|.++..+. . +.. .++|++|+|++|.+.... ..++
T Consensus 80 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~ 159 (362)
T 3goz_A 80 ANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELI 159 (362)
T ss_dssp TTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHH
T ss_pred CCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHH
Confidence 88999999999998553 33 4455 899999999999776664 2 334 368999999997664322 2455
Q ss_pred hhhcCCC-CCcEEEccCCCCCccCc-----cccCC-CCCCEEEccCCcccc-----ccccccCC-CCCCEEEccCCCCCc
Q 001143 158 SEIAGLK-CLTKLSVCHFSIRYLPP-----EIGCL-SNLEQLDLSFNKMKY-----LPTEICYL-KALISLKVANNKLVE 224 (1141)
Q Consensus 158 ~~l~~L~-~L~~L~Ls~N~L~~iP~-----~l~~l-~~L~~L~Ls~N~L~~-----iP~~l~~l-~~L~~L~Ls~N~L~~ 224 (1141)
..+..++ +|+.|+|++|+|+..+. .+..+ ++|+.|+|++|.|+. ++..+..+ ++|+.|+|++|.|+.
T Consensus 160 ~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~ 239 (362)
T 3goz_A 160 QILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHG 239 (362)
T ss_dssp HHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCC
T ss_pred HHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCc
Confidence 6666676 89999999999986543 33445 599999999999986 67777764 589999999999986
Q ss_pred CC-----cCccCCCCCCEEeCCCCCCCCCCcc-------cccCCCCCCEEEccCCcCCC
Q 001143 225 LP-----SGLYLLQRLENLDLSNNRLTSLGSL-------DLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 225 IP-----~~l~~L~~L~~L~Ls~N~Lt~~~p~-------~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
++ ..+..+++|+.|+|++|.++++.+. .+..+++|+.||+++|++..
T Consensus 240 ~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~ 298 (362)
T 3goz_A 240 PSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHP 298 (362)
T ss_dssp CCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCG
T ss_pred HHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCC
Confidence 54 3446688999999999997776654 46678889999999999876
No 340
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=1.8e-20 Score=215.54 Aligned_cols=233 Identities=17% Similarity=0.137 Sum_probs=165.5
Q ss_pred ccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCC-ccCc-cccCCcCCc-EEEc
Q 001143 22 LPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLN-LIPK-SVGRYEKLR-NLKF 98 (1141)
Q Consensus 22 L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt-~iP~-~l~~L~~L~-~L~L 98 (1141)
+....++|+.|+.+. ..+++.|+|++|+|+.+.+..|. +|++|++|+|++|++. .+|. .|.++++|. .+++
T Consensus 14 v~C~~~~Lt~iP~~l---~~~l~~L~Ls~N~i~~i~~~~f~---~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~ 87 (350)
T 4ay9_X 14 FLCQESKVTEIPSDL---PRNAIELRFVLTKLRVIQKGAFS---GFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIE 87 (350)
T ss_dssp EEEESTTCCSCCTTC---CTTCSEEEEESCCCSEECTTSST---TCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEE
T ss_pred EEecCCCCCccCcCc---CCCCCEEEccCCcCCCcCHHHHc---CCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcc
Confidence 455667788776543 24678888888888876665554 4488888888888874 4664 477787755 4666
Q ss_pred cCCCCCcC-chhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCCCCCcccch-hhhcCCC-CCcEEEccCC
Q 001143 99 FGNEINLF-PSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPPRPSVLTLL-SEIAGLK-CLTKLSVCHF 174 (1141)
Q Consensus 99 s~N~L~~l-P~~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~~~~lp-~~l~~L~-~L~~L~Ls~N 174 (1141)
++|+|+.+ |..|.++++|+.|++++|.+..++. .+....++..|++.++ +....+| ..|..+. .|+.|+|++|
T Consensus 88 ~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~---~~i~~l~~~~f~~~~~~l~~L~L~~N 164 (350)
T 4ay9_X 88 KANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDN---INIHTIERNSFVGLSFESVILWLNKN 164 (350)
T ss_dssp EETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESC---TTCCEECTTSSTTSBSSCEEEECCSS
T ss_pred cCCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccc---cccccccccchhhcchhhhhhccccc
Confidence 77888877 4557788888888888888776654 4556667777777652 2233333 2455553 5788889999
Q ss_pred CCCccCccccCCCCCCEEEccC-Cccccccc-cccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCC-CCCCCCCcc
Q 001143 175 SIRYLPPEIGCLSNLEQLDLSF-NKMKYLPT-EICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSN-NRLTSLGSL 251 (1141)
Q Consensus 175 ~L~~iP~~l~~l~~L~~L~Ls~-N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~-N~Lt~~~p~ 251 (1141)
+|+.||.......+|+.|+|++ |.++.||. .|..+++|+.|+|++|+|+.||... +.+|+.|.+.+ |.++.+|
T Consensus 165 ~i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~--~~~L~~L~~l~~~~l~~lP-- 240 (350)
T 4ay9_X 165 GIQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG--LENLKKLRARSTYNLKKLP-- 240 (350)
T ss_dssp CCCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS--CTTCCEEECTTCTTCCCCC--
T ss_pred cccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh--hccchHhhhccCCCcCcCC--
Confidence 9988888777778888888874 77888875 4678888999999999998888643 45666666544 4566655
Q ss_pred cccCCCCCCEEEccCC
Q 001143 252 DLCLMHNLQNLNLQYN 267 (1141)
Q Consensus 252 ~l~~L~~L~~L~Ls~N 267 (1141)
.+..+++|+.+++++|
T Consensus 241 ~l~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 241 TLEKLVALMEASLTYP 256 (350)
T ss_dssp CTTTCCSCCEEECSCH
T ss_pred CchhCcChhhCcCCCC
Confidence 3778888888888754
No 341
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.83 E-value=8.4e-20 Score=199.84 Aligned_cols=176 Identities=22% Similarity=0.271 Sum_probs=140.8
Q ss_pred CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEE
Q 001143 42 DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECL 119 (1141)
Q Consensus 42 ~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~lP~-~~~~L~~L~~L 119 (1141)
+.+.+|+++|+++..++. +. ++|+.|+|++|.|+.++. .|.++++|++|+|++|+|+.++. .|.++++|+.|
T Consensus 15 ~~~~l~~~~~~l~~~p~~-~~-----~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 88 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSG-IP-----ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTL 88 (251)
T ss_dssp GGTEEECTTCCCSSCCSC-CC-----TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEE
T ss_pred CCeEEecCCCCccccCCC-CC-----CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEE
Confidence 567899999999865543 22 578999999999997754 68899999999999999997754 47888888888
Q ss_pred EccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-ccCCCCCCEEEccCCc
Q 001143 120 QIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNK 198 (1141)
Q Consensus 120 ~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~ 198 (1141)
+|++|.++.++ +..|..+++|+.|+|++|+|+.+|.. |..+++|+.|+|++|+
T Consensus 89 ~L~~n~l~~~~--------------------------~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 142 (251)
T 3m19_A 89 GLANNQLASLP--------------------------LGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQ 142 (251)
T ss_dssp ECTTSCCCCCC--------------------------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcccccC--------------------------hhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCc
Confidence 88888765444 22455677788888888888877664 5788889999999999
Q ss_pred cccccc-cccCCCCCCEEEccCCCCCcCCc-CccCCCCCCEEeCCCCCCCCCC
Q 001143 199 MKYLPT-EICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLG 249 (1141)
Q Consensus 199 L~~iP~-~l~~l~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lt~~~ 249 (1141)
|+.+|. .|..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++|++++..
T Consensus 143 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 143 LQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTTS
T ss_pred CCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCCc
Confidence 988765 58888999999999999987765 6777899999999999998763
No 342
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.83 E-value=1.5e-20 Score=210.91 Aligned_cols=170 Identities=21% Similarity=0.235 Sum_probs=87.3
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N 147 (1141)
++|+.|++++|.++.+|. +..+++|+.|+|++|+|+.++. +.++++|+.|+|++|.++.++. +..+++|++|++++|
T Consensus 46 ~~L~~L~l~~~~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~n 122 (291)
T 1h6t_A 46 NSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDENKVKDLSS-LKDLKKLKSLSLEHN 122 (291)
T ss_dssp HTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCCGGG-GTTCTTCCEEECTTS
T ss_pred CcccEEEccCCCcccChh-HhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCCcCCCChh-hccCCCCCEEECCCC
Confidence 555666666665555542 5555566666666666655544 5555555555555555444332 444444444444443
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCc
Q 001143 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1141)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~ 227 (1141)
.+... ..+..+++|+.|++++|+++.+ ..+..+++|+.|+|++|+|+.++. +..+++|+.|+|++|+|+.+|.
T Consensus 123 ~i~~~-----~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~i~~l~~ 195 (291)
T 1h6t_A 123 GISDI-----NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNHISDLRA 195 (291)
T ss_dssp CCCCC-----GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSCCCBCGG
T ss_pred cCCCC-----hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCcCCCChh
Confidence 33221 1344455555555555555544 334555555555555555554443 5555555555555555555542
Q ss_pred CccCCCCCCEEeCCCCCCCCC
Q 001143 228 GLYLLQRLENLDLSNNRLTSL 248 (1141)
Q Consensus 228 ~l~~L~~L~~L~Ls~N~Lt~~ 248 (1141)
+..+++|+.|+|++|+++..
T Consensus 196 -l~~l~~L~~L~l~~n~i~~~ 215 (291)
T 1h6t_A 196 -LAGLKNLDVLELFSQECLNK 215 (291)
T ss_dssp -GTTCTTCSEEEEEEEEEECC
T ss_pred -hccCCCCCEEECcCCcccCC
Confidence 44555555555555555443
No 343
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.83 E-value=2.1e-22 Score=238.67 Aligned_cols=279 Identities=16% Similarity=0.123 Sum_probs=143.9
Q ss_pred CcccccCCCCCccccC----CCCCCCCCCCCEEEccCCCCCCCCcccc-cCCCCCC-CccEEEeecCCCC-----ccCcc
Q 001143 18 IKEKLPSEANKINNEK----NGSVNDDDDDSVIDVSGKTVDFPLIESY-GNRGGDN-SVEGLYLYKNVLN-----LIPKS 86 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~----~~~f~~l~~L~~LdLs~N~Ls~~~p~~~-~~l~~L~-~L~~L~Ls~N~Lt-----~iP~~ 86 (1141)
+++.|.+..|+|+... +..+..+++|++|||++|.|+...+..+ ..+.... +|++|+|++|.|+ .+|..
T Consensus 29 ~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~ 108 (461)
T 1z7x_W 29 QCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSST 108 (461)
T ss_dssp TCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHH
T ss_pred CccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHH
Confidence 4555666666655332 2334455666666666666654332222 1121111 4666666666665 23555
Q ss_pred ccCCcCCcEEEccCCCCCcC-chhh-----cCCCCCCEEEccCCCCCCC-----cccccCCCCCCEEECCCCCCCCCcc-
Q 001143 87 VGRYEKLRNLKFFGNEINLF-PSEV-----GNLLGLECLQIKISSPGVN-----GFALNKLKGLKELELSKVPPRPSVL- 154 (1141)
Q Consensus 87 l~~L~~L~~L~Ls~N~L~~l-P~~~-----~~L~~L~~L~Ls~N~l~~~-----~~~~~~L~~L~~L~Ls~N~ln~~~~- 154 (1141)
|..+++|++|+|++|.|+.. +..+ ..+++|+.|+|++|.++.. +..+..+++|++|++++|.+.....
T Consensus 109 l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~ 188 (461)
T 1z7x_W 109 LRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVR 188 (461)
T ss_dssp TTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHH
T ss_pred HccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHH
Confidence 66666666666666666521 2211 1244566666666654432 2344555666666666644321100
Q ss_pred cchhhhc-CCCCCcEEEccCCCCCc-----cCccccCCCCCCEEEccCCccccc-----ccc-ccCCCCCCEEEccCCCC
Q 001143 155 TLLSEIA-GLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKYL-----PTE-ICYLKALISLKVANNKL 222 (1141)
Q Consensus 155 ~lp~~l~-~L~~L~~L~Ls~N~L~~-----iP~~l~~l~~L~~L~Ls~N~L~~i-----P~~-l~~l~~L~~L~Ls~N~L 222 (1141)
.+...+. .+++|+.|++++|.++. +|..+..+++|+.|+|++|.|+.. ... +..+++|+.|+|++|+|
T Consensus 189 ~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l 268 (461)
T 1z7x_W 189 VLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGI 268 (461)
T ss_dssp HHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCC
T ss_pred HHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCC
Confidence 0111111 24466666666666664 344555566666666666666522 122 22456666666666666
Q ss_pred Cc-----CCcCccCCCCCCEEeCCCCCCCCCCcccccC-----CCCCCEEEccCCcCCCCC--CCchhhhhcccCCCCCC
Q 001143 223 VE-----LPSGLYLLQRLENLDLSNNRLTSLGSLDLCL-----MHNLQNLNLQYNKLLSYC--QVPSWICCNLEGNGKDS 290 (1141)
Q Consensus 223 ~~-----IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~-----L~~L~~L~Ls~N~L~~~~--~iP~~~~~~l~~~~l~~ 290 (1141)
+. +|..+..+++|+.|+|++|.++...+..+.. .++|+.|+|++|.+++.. .+|..+........+++
T Consensus 269 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 348 (461)
T 1z7x_W 269 TAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQI 348 (461)
T ss_dssp CHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEEC
T ss_pred CHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEc
Confidence 63 5555555666666666666665443333322 246666666666665421 13444444555556666
Q ss_pred CCCCcc
Q 001143 291 SNDDFI 296 (1141)
Q Consensus 291 ~~n~l~ 296 (1141)
+.|.+.
T Consensus 349 s~n~i~ 354 (461)
T 1z7x_W 349 SNNRLE 354 (461)
T ss_dssp CSSBCH
T ss_pred cCCccc
Confidence 665544
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.82 E-value=1.4e-21 Score=221.96 Aligned_cols=195 Identities=16% Similarity=0.123 Sum_probs=94.3
Q ss_pred CccEEEeecCCCCccCccccCCcCCcEEEccCCCCC-c-CchhhcCCCCCCEEEccCCCCC-CCcccccCCCCCCEEECC
Q 001143 69 SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEIN-L-FPSEVGNLLGLECLQIKISSPG-VNGFALNKLKGLKELELS 145 (1141)
Q Consensus 69 ~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~-~-lP~~~~~L~~L~~L~Ls~N~l~-~~~~~~~~L~~L~~L~Ls 145 (1141)
+|+.|+|++|.++.++..+..+++|+.|+|++|.|+ . +|..+..+++|+.|+|++|.++ ..+..+..+++|++|+++
T Consensus 71 ~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~ 150 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 150 (336)
T ss_dssp TCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred cceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECC
Confidence 445555555555544434444555555555555554 1 4444555555555555555433 223344445555555555
Q ss_pred CCCCCCCcc-cchhhhcCCCCCcEEEccCC-CCCc--cCccccCCC-CCCEEEccCCc--cc--cccccccCCCCCCEEE
Q 001143 146 KVPPRPSVL-TLLSEIAGLKCLTKLSVCHF-SIRY--LPPEIGCLS-NLEQLDLSFNK--MK--YLPTEICYLKALISLK 216 (1141)
Q Consensus 146 ~N~ln~~~~-~lp~~l~~L~~L~~L~Ls~N-~L~~--iP~~l~~l~-~L~~L~Ls~N~--L~--~iP~~l~~l~~L~~L~ 216 (1141)
+|. .+.. .++..+.++++|+.|++++| .++. +|..+..++ +|+.|+|++|. ++ .+|..+..+++|+.|+
T Consensus 151 ~~~--~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~ 228 (336)
T 2ast_B 151 GCS--GFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLD 228 (336)
T ss_dssp TCB--SCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEE
T ss_pred CCC--CCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEe
Confidence 531 1111 23334445555555555555 5552 344445555 55555555552 32 3444455555555555
Q ss_pred ccCCC-CC-cCCcCccCCCCCCEEeCCCCCCCCCCcc---cccCCCCCCEEEccCC
Q 001143 217 VANNK-LV-ELPSGLYLLQRLENLDLSNNRLTSLGSL---DLCLMHNLQNLNLQYN 267 (1141)
Q Consensus 217 Ls~N~-L~-~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~---~l~~L~~L~~L~Ls~N 267 (1141)
|++|. ++ ..+..+..+++|+.|+|++|. ++.+. .+..+++|+.|++++|
T Consensus 229 l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~--~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 229 LSDSVMLKNDCFQEFFQLNYLQHLSLSRCY--DIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp CTTCTTCCGGGGGGGGGCTTCCEEECTTCT--TCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCCcCCHHHHHHHhCCCCCCEeeCCCCC--CCCHHHHHHHhcCCCCCEEeccCc
Confidence 55555 33 334455555555555555553 22222 3445555555555555
No 345
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.82 E-value=1.5e-21 Score=225.53 Aligned_cols=251 Identities=16% Similarity=0.111 Sum_probs=190.7
Q ss_pred EEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccC-----ccccCCc-CCcEEEccCCCCCcC-chhhcCC----
Q 001143 45 VIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIP-----KSVGRYE-KLRNLKFFGNEINLF-PSEVGNL---- 113 (1141)
Q Consensus 45 ~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP-----~~l~~L~-~L~~L~Ls~N~L~~l-P~~~~~L---- 113 (1141)
.++|++|++++.+|..+... ++|++|+|++|.|+.++ ..|..++ +|++|+|++|.|+.. +..|..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~---~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~ 78 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIP---HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAI 78 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSC---TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTS
T ss_pred ccccccccchHHHHHHHhCC---CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhcc
Confidence 57899999999999876554 67999999999999876 5678898 899999999999965 5566664
Q ss_pred -CCCCEEEccCCCCCCCccc-----ccCC-CCCCEEECCCCCCCCCccc-chhhhcCC-CCCcEEEccCCCCC-----cc
Q 001143 114 -LGLECLQIKISSPGVNGFA-----LNKL-KGLKELELSKVPPRPSVLT-LLSEIAGL-KCLTKLSVCHFSIR-----YL 179 (1141)
Q Consensus 114 -~~L~~L~Ls~N~l~~~~~~-----~~~L-~~L~~L~Ls~N~ln~~~~~-lp~~l~~L-~~L~~L~Ls~N~L~-----~i 179 (1141)
++|++|+|++|.++..+.. +..+ ++|++|+|++|.+...... +...+..+ ++|+.|+|++|+|+ .+
T Consensus 79 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l 158 (362)
T 3goz_A 79 PANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDEL 158 (362)
T ss_dssp CTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHH
T ss_pred CCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHH
Confidence 9999999999998765542 5555 8999999999776443322 22334553 69999999999999 34
Q ss_pred CccccCCC-CCCEEEccCCccccc-cc----cccCC-CCCCEEEccCCCCCc-----CCcCccCC-CCCCEEeCCCCCCC
Q 001143 180 PPEIGCLS-NLEQLDLSFNKMKYL-PT----EICYL-KALISLKVANNKLVE-----LPSGLYLL-QRLENLDLSNNRLT 246 (1141)
Q Consensus 180 P~~l~~l~-~L~~L~Ls~N~L~~i-P~----~l~~l-~~L~~L~Ls~N~L~~-----IP~~l~~L-~~L~~L~Ls~N~Lt 246 (1141)
+..+..++ +|+.|+|++|+|+.. +. .+..+ ++|+.|+|++|.|+. +|..+..+ ++|+.|+|++|+|+
T Consensus 159 ~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~ 238 (362)
T 3goz_A 159 IQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLH 238 (362)
T ss_dssp HHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCC
T ss_pred HHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCC
Confidence 45556665 999999999999854 33 34455 599999999999986 67777764 58999999999999
Q ss_pred CCCcc----cccCCCCCCEEEccCCcCCCCC-----CCchhhhhcccCCCCCCCCCCcccC
Q 001143 247 SLGSL----DLCLMHNLQNLNLQYNKLLSYC-----QVPSWICCNLEGNGKDSSNDDFISS 298 (1141)
Q Consensus 247 ~~~p~----~l~~L~~L~~L~Ls~N~L~~~~-----~iP~~~~~~l~~~~l~~~~n~l~~~ 298 (1141)
+.++. .+..+++|+.|+|++|.+.... .++..+........+++.+|.+...
T Consensus 239 ~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 239 GPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp CCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred cHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 98763 3567899999999999976521 0111222233345566666665544
No 346
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=2e-20 Score=216.23 Aligned_cols=183 Identities=22% Similarity=0.214 Sum_probs=133.9
Q ss_pred cEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchh-hc-CCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001143 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSE-VG-NLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1141)
Q Consensus 71 ~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~-~~-~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ 148 (1141)
+.+++++|.|+.||..+.. .|+.|+|++|+|+.++.. |. ++++|+.|+|++|+++.++
T Consensus 21 ~~l~c~~~~l~~iP~~~~~--~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~------------------ 80 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLPS--YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFIS------------------ 80 (361)
T ss_dssp TEEECCSSCCSSCCSSCCT--TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEEC------------------
T ss_pred CEEEeCCCCcCccCccCCC--CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccC------------------
Confidence 4666777777777665443 466677777777666443 33 5566665555555543322
Q ss_pred CCCCcccchhhhcCCCCCcEEEccCCCCCccCc-cccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCC
Q 001143 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELP 226 (1141)
Q Consensus 149 ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP 226 (1141)
+..|.++++|+.|+|++|+|+.+|. .|..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|
T Consensus 81 --------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~ 152 (361)
T 2xot_A 81 --------SEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFP 152 (361)
T ss_dssp --------TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCC
T ss_pred --------hhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeC
Confidence 2345667777777777788776655 567888888888888888866 567888888999999999998888
Q ss_pred cCc----cCCCCCCEEeCCCCCCCCCCcccccCCCC--CCEEEccCCcCCCCCCCchhhhh
Q 001143 227 SGL----YLLQRLENLDLSNNRLTSLGSLDLCLMHN--LQNLNLQYNKLLSYCQVPSWICC 281 (1141)
Q Consensus 227 ~~l----~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~--L~~L~Ls~N~L~~~~~iP~~~~~ 281 (1141)
..+ ..+++|+.|+|++|+|+++++..|..++. |+.|+|++|+|.|.|.+-+++..
T Consensus 153 ~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l~~~~~~ 213 (361)
T 2xot_A 153 VELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECDCKLYQLFSH 213 (361)
T ss_dssp GGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECCHHHHHHHHH
T ss_pred HHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCCcCcHHHHHH
Confidence 766 46899999999999999999888888887 48899999999999887665443
No 347
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.82 E-value=9.7e-20 Score=209.41 Aligned_cols=221 Identities=19% Similarity=0.085 Sum_probs=180.3
Q ss_pred CCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccE-EEeecCCCCccC-ccccCCcC
Q 001143 15 EGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEG-LYLYKNVLNLIP-KSVGRYEK 92 (1141)
Q Consensus 15 ~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~-L~Ls~N~Lt~iP-~~l~~L~~ 92 (1141)
.++++++|.+..|+|+.|++++|.++++|++|||++|++.+.+|. +.|.+|++|++ +.++.|+|+.+| ..|..+++
T Consensus 28 l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~--~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~ 105 (350)
T 4ay9_X 28 LPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEA--DVFSNLPKLHEIRIEKANNLLYINPEAFQNLPN 105 (350)
T ss_dssp CCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECT--TSBCSCTTCCEEEEEEETTCCEECTTSBCCCTT
T ss_pred cCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccCh--hHhhcchhhhhhhcccCCcccccCchhhhhccc
Confidence 345799999999999999999999999999999999999876664 23455577665 677889999985 56899999
Q ss_pred CcEEEccCCCCCcCch-hhcCCCCCCEEEccC-CCCCCCcc-cccCCC-CCCEEECCCCCCCCCcccchhhhcCCCCCcE
Q 001143 93 LRNLKFFGNEINLFPS-EVGNLLGLECLQIKI-SSPGVNGF-ALNKLK-GLKELELSKVPPRPSVLTLLSEIAGLKCLTK 168 (1141)
Q Consensus 93 L~~L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~-N~l~~~~~-~~~~L~-~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~ 168 (1141)
|++|+|++|+|+.+|. .+....++..|++.. |.+..++. .|..+. .|+.|+|++|.+. .+|.......+|+.
T Consensus 106 L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~----~i~~~~f~~~~L~~ 181 (350)
T 4ay9_X 106 LQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQ----EIHNSAFNGTQLDE 181 (350)
T ss_dssp CCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCC----EECTTSSTTEEEEE
T ss_pred cccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccccc----CCChhhccccchhH
Confidence 9999999999998865 466778888999966 45776664 566665 6899999996654 56666667778999
Q ss_pred EEcc-CCCCCccCc-cccCCCCCCEEEccCCccccccccccCCCCCCEEEccC-CCCCcCCcCccCCCCCCEEeCCCCC
Q 001143 169 LSVC-HFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVAN-NKLVELPSGLYLLQRLENLDLSNNR 244 (1141)
Q Consensus 169 L~Ls-~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~-N~L~~IP~~l~~L~~L~~L~Ls~N~ 244 (1141)
|++. +|.++.||. .|..+++|+.|+|++|+|+.||... +.+|+.|.+.+ +.++.+| .+..+++|+.++++++.
T Consensus 182 l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~--~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 182 LNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYG--LENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp EECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSS--CTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred HhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhh--hccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 9997 588999987 5689999999999999999998642 55677777654 4788999 48889999999998753
No 348
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.7e-19 Score=202.43 Aligned_cols=191 Identities=24% Similarity=0.226 Sum_probs=168.7
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N 147 (1141)
.++..+.+..+.++.+. .+..+++|+.|++++|.|+.+|. +..+++|+.|+|++|.++.++. +..+++|++|++++|
T Consensus 24 ~~~~~~~l~~~~~~~~~-~~~~l~~L~~L~l~~~~i~~~~~-~~~l~~L~~L~L~~n~l~~~~~-l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 24 AETIKDNLKKKSVTDAV-TQNELNSIDQIIANNSDIKSVQG-IQYLPNVTKLFLNGNKLTDIKP-LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHHHHTTCSCTTSEE-CHHHHHTCCEEECTTSCCCCCTT-GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSS
T ss_pred HHHHHHHhcCCCccccc-chhhcCcccEEEccCCCcccChh-HhcCCCCCEEEccCCccCCCcc-cccCCCCCEEECCCC
Confidence 34555667777776552 35678899999999999999975 8999999999999999988887 999999999999997
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCc
Q 001143 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1141)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~ 227 (1141)
.+.. +| .+..+++|+.|++++|+|+.+ +.+..+++|+.|+|++|+|+.+ ..+..+++|+.|+|++|+|+.++.
T Consensus 101 ~l~~----~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~L~~N~l~~~~~ 173 (291)
T 1h6t_A 101 KVKD----LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDIVP 173 (291)
T ss_dssp CCCC----GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCCCGG
T ss_pred cCCC----Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCcc-hhhccCCCCCEEEccCCccccchh
Confidence 7654 33 488999999999999999988 4688999999999999999988 679999999999999999998876
Q ss_pred CccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 001143 228 GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 228 ~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
+..+++|+.|+|++|+|++++ .+..+++|+.|++++|+++.
T Consensus 174 -l~~l~~L~~L~L~~N~i~~l~--~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 174 -LAGLTKLQNLYLSKNHISDLR--ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp -GTTCTTCCEEECCSSCCCBCG--GGTTCTTCSEEEEEEEEEEC
T ss_pred -hcCCCccCEEECCCCcCCCCh--hhccCCCCCEEECcCCcccC
Confidence 899999999999999999874 48999999999999999986
No 349
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=5.7e-20 Score=226.49 Aligned_cols=192 Identities=19% Similarity=0.204 Sum_probs=114.9
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEcc
Q 001143 43 DSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIK 122 (1141)
Q Consensus 43 L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls 122 (1141)
+..++|+.+.++..++. . .|++|+.|+|++|.|+.+| .|..|++|+.|+|++|+|+.+|. |..|++|+.|+|+
T Consensus 23 l~~l~l~~~~i~~~~~~--~---~L~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVTQ--N---ELNSIDQIIANNSDIKSVQ-GIQYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHTTCSCTTSEECH--H---HHTTCCCCBCTTCCCCCCT-TGGGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECC
T ss_pred HHHHhccCCCcccccch--h---cCCCCCEEECcCCCCCCCh-HHccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECc
Confidence 33444555555544331 2 2356666666666666665 36666666666666666666654 6666666666666
Q ss_pred CCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccc
Q 001143 123 ISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL 202 (1141)
Q Consensus 123 ~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~i 202 (1141)
+|.+..++ .+..|++|+.|+|++|.+..+ ..+..|++|+.|+|++|+|+.+ ..+..+++|+.|+|++|+|+.+
T Consensus 96 ~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l-----~~l~~l~~L~~L~Ls~N~l~~l-~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 96 ENKIKDLS-SLKDLKKLKSLSLEHNGISDI-----NGLVHLPQLESLYLGNNKITDI-TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp SSCCCCCT-TSTTCTTCCEEECTTSCCCCC-----GGGGGCTTCSEEECCSSCCCCC-GGGGSCTTCSEEECCSSCCCCC
T ss_pred CCCCCCCh-hhccCCCCCEEEecCCCCCCC-----ccccCCCccCEEECCCCccCCc-hhhcccCCCCEEECcCCcCCCc
Confidence 66655544 355555566666655544332 2355666666666666666665 4456666666666666666655
Q ss_pred cccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCc
Q 001143 203 PTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 203 P~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
+. +..+++|+.|+|++|+|+.+| .+..|++|+.|+|++|+|++.+.
T Consensus 169 ~~-l~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 169 VP-LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp GG-GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEECCSEEEECCCC
T ss_pred hh-hccCCCCCEEECcCCCCCCCh-HHccCCCCCEEEccCCcCcCCcc
Confidence 44 666666666666666666664 46666666666666666665544
No 350
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.81 E-value=2.2e-20 Score=212.07 Aligned_cols=242 Identities=18% Similarity=0.178 Sum_probs=197.5
Q ss_pred CCcccccCCCCCccccCCCCCCCC--CCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCc--cCccccCCcC
Q 001143 17 PIKEKLPSEANKINNEKNGSVNDD--DDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNL--IPKSVGRYEK 92 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~~~f~~l--~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~--iP~~l~~L~~ 92 (1141)
.....+++..|++. +..+..+ .+++.|+|++|.+++.++.. ..+++|++|+|++|.++. +|..+..+++
T Consensus 47 ~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~----~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~ 119 (336)
T 2ast_B 47 SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEH----FSPFRVQHMDLSNSVIEVSTLHGILSQCSK 119 (336)
T ss_dssp TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSC----CCCBCCCEEECTTCEECHHHHHHHHTTBCC
T ss_pred hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhh----ccCCCCCEEEccCCCcCHHHHHHHHhhCCC
Confidence 35778888888776 4556666 89999999999999987763 345999999999999983 7888999999
Q ss_pred CcEEEccCCCCC-cCchhhcCCCCCCEEEccCC-CCCC--CcccccCCCCCCEEECCCC-CCCCCcccchhhhcCCC-CC
Q 001143 93 LRNLKFFGNEIN-LFPSEVGNLLGLECLQIKIS-SPGV--NGFALNKLKGLKELELSKV-PPRPSVLTLLSEIAGLK-CL 166 (1141)
Q Consensus 93 L~~L~Ls~N~L~-~lP~~~~~L~~L~~L~Ls~N-~l~~--~~~~~~~L~~L~~L~Ls~N-~ln~~~~~lp~~l~~L~-~L 166 (1141)
|++|+|++|.++ .+|..++.+++|+.|+|++| .++. ++..+..+++|++|++++| .+.. ..++..+..++ +|
T Consensus 120 L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~--~~~~~~~~~l~~~L 197 (336)
T 2ast_B 120 LQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE--KHVQVAVAHVSETI 197 (336)
T ss_dssp CSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH--HHHHHHHHHSCTTC
T ss_pred CCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh--HHHHHHHHhcccCC
Confidence 999999999998 67888999999999999999 5763 5667889999999999996 5432 12567788899 99
Q ss_pred cEEEccCC--CCC--ccCccccCCCCCCEEEccCCc-cc-cccccccCCCCCCEEEccCCC-CC-cCCcCccCCCCCCEE
Q 001143 167 TKLSVCHF--SIR--YLPPEIGCLSNLEQLDLSFNK-MK-YLPTEICYLKALISLKVANNK-LV-ELPSGLYLLQRLENL 238 (1141)
Q Consensus 167 ~~L~Ls~N--~L~--~iP~~l~~l~~L~~L~Ls~N~-L~-~iP~~l~~l~~L~~L~Ls~N~-L~-~IP~~l~~L~~L~~L 238 (1141)
+.|++++| .++ .+|..+..+++|+.|+|++|. ++ ..+..+..+++|+.|+|++|. ++ .....+.++++|+.|
T Consensus 198 ~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L 277 (336)
T 2ast_B 198 TQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTL 277 (336)
T ss_dssp CEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEE
T ss_pred CEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEE
Confidence 99999999 454 567778889999999999999 66 667889999999999999995 33 112357889999999
Q ss_pred eCCCCCCCCCCcccccCCC-CCCEEEccCCcCCC
Q 001143 239 DLSNNRLTSLGSLDLCLMH-NLQNLNLQYNKLLS 271 (1141)
Q Consensus 239 ~Ls~N~Lt~~~p~~l~~L~-~L~~L~Ls~N~L~~ 271 (1141)
+|++| ++ ...+..+. .|..|++++|++++
T Consensus 278 ~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~ 307 (336)
T 2ast_B 278 QVFGI-VP---DGTLQLLKEALPHLQINCSHFTT 307 (336)
T ss_dssp ECTTS-SC---TTCHHHHHHHSTTSEESCCCSCC
T ss_pred eccCc-cC---HHHHHHHHhhCcceEEecccCcc
Confidence 99999 44 32343332 36667799999998
No 351
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=4.5e-19 Score=190.75 Aligned_cols=124 Identities=19% Similarity=0.209 Sum_probs=102.7
Q ss_pred hcCCCCCcEEEccCCCCCccCc-cccCCCCCCEEEccCCccccccc-cccCCCCCCEEEccCCCCCcC-CcCccCCCCCC
Q 001143 160 IAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPT-EICYLKALISLKVANNKLVEL-PSGLYLLQRLE 236 (1141)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~ 236 (1141)
|..+++|+.|+|++|+|+.++. .|..+++|++|+|++|+|+.+|. .|..+++|++|+|++|+|+.+ |..+..+++|+
T Consensus 53 ~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 132 (220)
T 2v70_A 53 FKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVR 132 (220)
T ss_dssp GGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCS
T ss_pred hccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCC
Confidence 4455667777777777776654 67888888888888888887754 588899999999999999977 67888899999
Q ss_pred EEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcc
Q 001143 237 NLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNL 283 (1141)
Q Consensus 237 ~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l 283 (1141)
.|+|++|+|++++|..|..+++|+.|+|++|+|.|.|++.+...|..
T Consensus 133 ~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~l~~~~~ 179 (220)
T 2v70_A 133 LLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCYLAWLGEWLR 179 (220)
T ss_dssp EEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGGGHHHHHHHH
T ss_pred EEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCchHHHHHHHH
Confidence 99999999999999899999999999999999999888765555544
No 352
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.79 E-value=8.4e-20 Score=204.23 Aligned_cols=152 Identities=16% Similarity=0.145 Sum_probs=112.5
Q ss_pred CceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCCh----H------HHHHhHHhHHHHHHHHhhCCCCCcccee
Q 001143 807 SLSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSA----D------EIRNFEYSCLGEVRMLGALRHSCIVEMY 875 (1141)
Q Consensus 807 ~y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~----~------~~~~~~~~~~~Ei~iL~~L~HpNIVkll 875 (1141)
-|.+.+.||+|+||.||+|.+ .+..+|+|+.+........ . ........+.+|+.++++++ | +++.
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~ 167 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVP 167 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSC
T ss_pred EEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcC
Confidence 367889999999999999999 4667888886533211100 0 00011234589999999999 4 6666
Q ss_pred eeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 001143 876 GHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHRDIK 955 (1141)
Q Consensus 876 g~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLK 955 (1141)
+++.. + ..++||||++|++|.+ +.. .....++.||+.||.|||++||+|||||
T Consensus 168 ~~~~~-~--------------~~~lvmE~~~g~~L~~-l~~-----------~~~~~i~~qi~~~l~~lH~~giiHrDlk 220 (282)
T 1zar_A 168 KVYAW-E--------------GNAVLMELIDAKELYR-VRV-----------ENPDEVLDMILEEVAKFYHRGIVHGDLS 220 (282)
T ss_dssp CEEEE-E--------------TTEEEEECCCCEEGGG-CCC-----------SCHHHHHHHHHHHHHHHHHTTEECSCCS
T ss_pred eEEec-c--------------ceEEEEEecCCCcHHH-cch-----------hhHHHHHHHHHHHHHHHHHCCCEeCCCC
Confidence 65543 2 2299999999999987 311 2345799999999999999999999999
Q ss_pred CCCeeeecccccCCCCCeEEEeeccccccccccccccccccCCCCCCCCccCCCcccchhhhcc
Q 001143 956 SENILIDLERKKADGKPVVKLCDFDRAVPLRSFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRA 1019 (1141)
Q Consensus 956 P~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 1019 (1141)
|+|||++ + +.+||+|||+|+. +..|+|||++..
T Consensus 221 p~NILl~-~-------~~vkl~DFG~a~~-----------------------~~~~~a~e~l~r 253 (282)
T 1zar_A 221 QYNVLVS-E-------EGIWIIDFPQSVE-----------------------VGEEGWREILER 253 (282)
T ss_dssp TTSEEEE-T-------TEEEECCCTTCEE-----------------------TTSTTHHHHHHH
T ss_pred HHHEEEE-C-------CcEEEEECCCCeE-----------------------CCCCCHHHHHHH
Confidence 9999999 6 7899999999853 334789999864
No 353
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.79 E-value=4.8e-19 Score=218.20 Aligned_cols=188 Identities=20% Similarity=0.180 Sum_probs=163.0
Q ss_pred cCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCC
Q 001143 23 PSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNE 102 (1141)
Q Consensus 23 ~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~ 102 (1141)
.+..+.++.+. .+..+.+|+.|+|++|.|+... .+ ..|++|+.|+|++|.|+.+|. |..+++|+.|+|++|.
T Consensus 27 ~l~~~~i~~~~--~~~~L~~L~~L~l~~n~i~~l~--~l---~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~ 98 (605)
T 1m9s_A 27 NLKKKSVTDAV--TQNELNSIDQIIANNSDIKSVQ--GI---QYLPNVTKLFLNGNKLTDIKP-LTNLKNLGWLFLDENK 98 (605)
T ss_dssp HTTCSCTTSEE--CHHHHTTCCCCBCTTCCCCCCT--TG---GGCTTCCEEECTTSCCCCCGG-GGGCTTCCEEECCSSC
T ss_pred hccCCCccccc--chhcCCCCCEEECcCCCCCCCh--HH---ccCCCCCEEEeeCCCCCCChh-hccCCCCCEEECcCCC
Confidence 34445555443 3568889999999999998753 24 455999999999999999876 9999999999999999
Q ss_pred CCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc
Q 001143 103 INLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE 182 (1141)
Q Consensus 103 L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~ 182 (1141)
|+.+| .|..|++|+.|+|++|.+..++ .+..|++|+.|+|++|.+..+ ..+..|++|+.|+|++|+|+.+++
T Consensus 99 l~~l~-~l~~l~~L~~L~Ls~N~l~~l~-~l~~l~~L~~L~Ls~N~l~~l-----~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 99 IKDLS-SLKDLKKLKSLSLEHNGISDIN-GLVHLPQLESLYLGNNKITDI-----TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp CCCCT-TSTTCTTCCEEECTTSCCCCCG-GGGGCTTCSEEECCSSCCCCC-----GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCCh-hhccCCCCCEEEecCCCCCCCc-cccCCCccCEEECCCCccCCc-----hhhcccCCCCEEECcCCcCCCchh-
Confidence 99887 6999999999999999988875 589999999999999877654 468899999999999999998866
Q ss_pred ccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCc
Q 001143 183 IGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1141)
Q Consensus 183 l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~ 227 (1141)
+..+++|+.|+|++|+|+.+| .+..+++|+.|+|++|+|+..|.
T Consensus 171 l~~l~~L~~L~Ls~N~i~~l~-~l~~l~~L~~L~L~~N~l~~~p~ 214 (605)
T 1m9s_A 171 LAGLTKLQNLYLSKNHISDLR-ALAGLKNLDVLELFSQECLNKPI 214 (605)
T ss_dssp GTTCTTCCEEECCSSCCCBCG-GGTTCTTCSEEECCSEEEECCCC
T ss_pred hccCCCCCEEECcCCCCCCCh-HHccCCCCCEEEccCCcCcCCcc
Confidence 899999999999999999985 69999999999999999987664
No 354
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=2.5e-21 Score=236.96 Aligned_cols=195 Identities=22% Similarity=0.204 Sum_probs=143.5
Q ss_pred CCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCC-------------CC-cCchhhcCCCCCCEEE-
Q 001143 56 PLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNE-------------IN-LFPSEVGNLLGLECLQ- 120 (1141)
Q Consensus 56 ~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~-------------L~-~lP~~~~~L~~L~~L~- 120 (1141)
....++.++..++.|+.|+|++|+|+.||.+|+++++|+.|++++|. +. .+|..+++|++|+.|+
T Consensus 337 ~~~~~~~d~~~~~~L~~L~Ls~n~L~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~ 416 (567)
T 1dce_A 337 RPECWCRDSATDEQLFRCELSVEKSTVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDP 416 (567)
T ss_dssp CSEEEEECCSTTTTSSSCCCCHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCG
T ss_pred CchhhhcccccCccceeccCChhhHHhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcc
Confidence 33444544556688889999999999899889999999999987775 22 3355556666666665
Q ss_pred ccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccc
Q 001143 121 IKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMK 200 (1141)
Q Consensus 121 Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~ 200 (1141)
++.|.+ .+|..+.+++|. +..+|. ..|+.|+|++|+|+.+|. ++.+++|+.|+|++|+|+
T Consensus 417 l~~n~~----------~~L~~l~l~~n~----i~~l~~-----~~L~~L~Ls~n~l~~lp~-~~~l~~L~~L~Ls~N~l~ 476 (567)
T 1dce_A 417 MRAAYL----------DDLRSKFLLENS----VLKMEY-----ADVRVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLR 476 (567)
T ss_dssp GGHHHH----------HHHHHHHHHHHH----HHHHHH-----TTCSEEECTTSCCSSCCC-GGGGTTCCEEECCSSCCC
T ss_pred hhhccc----------chhhhhhhhccc----ccccCc-----cCceEEEecCCCCCCCcC-ccccccCcEeecCccccc
Confidence 443321 122233333321 122222 247888888888888886 888888888888888888
Q ss_pred cccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCC-cccccCCCCCCEEEccCCcCCC
Q 001143 201 YLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLG-SLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 201 ~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~-p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
.||..|+.+++|+.|+|++|+|+.|| .++.|++|+.|+|++|+|++++ |..|..|++|+.|+|++|+|++
T Consensus 477 ~lp~~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~ 547 (567)
T 1dce_A 477 ALPPALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQ 547 (567)
T ss_dssp CCCGGGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGG
T ss_pred ccchhhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCC
Confidence 88888888888888888888888888 7888888888888888888886 7788888888888888888887
No 355
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=2.8e-18 Score=184.53 Aligned_cols=162 Identities=20% Similarity=0.229 Sum_probs=132.5
Q ss_pred cEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccC
Q 001143 94 RNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCH 173 (1141)
Q Consensus 94 ~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~ 173 (1141)
+.+++++|.|+.||..+. ++|+.|+|++|.+..++ +..|..+++|+.|+|++
T Consensus 14 ~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~--------------------------~~~~~~l~~L~~L~Ls~ 65 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIP--------------------------PGAFSPYKKLRRIDLSN 65 (220)
T ss_dssp TEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEEC--------------------------TTSSTTCTTCCEEECCS
T ss_pred CEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcC--------------------------HhHhhCCCCCCEEECCC
Confidence 567888888888877654 55666666655544332 23567788888888888
Q ss_pred CCCCcc-CccccCCCCCCEEEccCCcccccccc-ccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEeCCCCCCCCCCc
Q 001143 174 FSIRYL-PPEIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVEL-PSGLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 174 N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
|+|+.+ |..|..+++|++|+|++|+|+.+|.. |..+++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+++++
T Consensus 66 N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 66 NQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp SCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred CcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 998866 67889999999999999999988865 57899999999999999977 5678889999999999999999999
Q ss_pred ccccCCCCCCEEEccCCcCCCCCCCchhhhhcc
Q 001143 251 LDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNL 283 (1141)
Q Consensus 251 ~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l 283 (1141)
..|..+++|+.|+|++|+|.|.|.+.+...|..
T Consensus 146 ~~~~~l~~L~~L~L~~N~~~c~c~l~~l~~~l~ 178 (220)
T 2v9t_B 146 GTFSPLRAIQTMHLAQNPFICDCHLKWLADYLH 178 (220)
T ss_dssp TTTTTCTTCCEEECCSSCEECSGGGHHHHHHHH
T ss_pred HHHhCCCCCCEEEeCCCCcCCCCccHHHHHHHH
Confidence 889999999999999999999998765555533
No 356
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=2.4e-19 Score=198.19 Aligned_cols=82 Identities=26% Similarity=0.391 Sum_probs=39.6
Q ss_pred CCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCC
Q 001143 164 KCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNN 243 (1141)
Q Consensus 164 ~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N 243 (1141)
++|+.|+|++|+|+.+| .+..+++|+.|+|++|+|+.+| .+..+++|+.|+|++|+|+.+ ..+..+++|+.|+|++|
T Consensus 106 ~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N 182 (263)
T 1xeu_A 106 ACLSRLFLDNNELRDTD-SLIHLKNLEILSIRNNKLKSIV-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQ 182 (263)
T ss_dssp SSCCEEECCSSCCSBSG-GGTTCTTCCEEECTTSCCCBCG-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEE
T ss_pred CcccEEEccCCccCCCh-hhcCcccccEEECCCCcCCCCh-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCC
Confidence 34445555555554443 2444555555555555555443 344445555555555555444 33444445555555555
Q ss_pred CCCCC
Q 001143 244 RLTSL 248 (1141)
Q Consensus 244 ~Lt~~ 248 (1141)
++++.
T Consensus 183 ~~~~~ 187 (263)
T 1xeu_A 183 KCVNE 187 (263)
T ss_dssp EEECC
T ss_pred cccCC
Confidence 54444
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.77 E-value=5.9e-19 Score=195.10 Aligned_cols=168 Identities=25% Similarity=0.232 Sum_probs=126.6
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N 147 (1141)
.++..|+|++|.++.++ .+..+++|+.|+|++|.|+.+| .+..++ +|++|+|++|
T Consensus 19 ~~l~~l~l~~~~i~~~~-~~~~l~~L~~L~l~~n~i~~l~-~l~~l~-----------------------~L~~L~L~~N 73 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV-SQKELSGVQNFNGDNSNIQSLA-GMQFFT-----------------------NLKELHLSHN 73 (263)
T ss_dssp HHHHHHHHTCSCTTSEE-CHHHHTTCSEEECTTSCCCCCT-TGGGCT-----------------------TCCEEECCSS
T ss_pred HHHHHHHhcCCCccccc-chhhcCcCcEEECcCCCcccch-HHhhCC-----------------------CCCEEECCCC
Confidence 34445555555555554 3445555555555555555554 344444 4555555554
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCc
Q 001143 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1141)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~ 227 (1141)
.+.. +|. +..+++|+.|+|++|+|+.+|.... ++|++|+|++|+|+.+| .+..+++|+.|+|++|+|+.+|
T Consensus 74 ~i~~----~~~-l~~l~~L~~L~L~~N~l~~l~~~~~--~~L~~L~L~~N~l~~~~-~l~~l~~L~~L~Ls~N~i~~~~- 144 (263)
T 1xeu_A 74 QISD----LSP-LKDLTKLEELSVNRNRLKNLNGIPS--ACLSRLFLDNNELRDTD-SLIHLKNLEILSIRNNKLKSIV- 144 (263)
T ss_dssp CCCC----CGG-GTTCSSCCEEECCSSCCSCCTTCCC--SSCCEEECCSSCCSBSG-GGTTCTTCCEEECTTSCCCBCG-
T ss_pred ccCC----Chh-hccCCCCCEEECCCCccCCcCcccc--CcccEEEccCCccCCCh-hhcCcccccEEECCCCcCCCCh-
Confidence 3332 222 6778889999999999998876433 99999999999999986 5999999999999999999997
Q ss_pred CccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 001143 228 GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 228 ~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
.+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|++++
T Consensus 145 ~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 145 MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEEEEEEEEEC
T ss_pred HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEeCCCCcccC
Confidence 688999999999999999998 479999999999999999987
No 358
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.76 E-value=2.2e-18 Score=182.78 Aligned_cols=165 Identities=21% Similarity=0.255 Sum_probs=71.5
Q ss_pred EEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchh-hcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCC
Q 001143 72 GLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSE-VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPR 150 (1141)
Q Consensus 72 ~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~-~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln 150 (1141)
.+++++|.++.+|..+. ++|++|+|++|+|+.+|.. |.++++|++|+|++|+++.++..
T Consensus 11 ~v~c~~~~l~~~p~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~------------------ 70 (208)
T 2o6s_A 11 TVECYSQGRTSVPTGIP--AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNG------------------ 70 (208)
T ss_dssp EEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTT------------------
T ss_pred EEEecCCCccCCCCCCC--CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChh------------------
Confidence 44555555555554332 2455555555555544332 34445555555544443332211
Q ss_pred CCcccchhhhcCCCCCcEEEccCCCCCccCcc-ccCCCCCCEEEccCCcccccccc-ccCCCCCCEEEccCCCCCcCCcC
Q 001143 151 PSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSG 228 (1141)
Q Consensus 151 ~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~IP~~ 228 (1141)
.|..+++|++|+|++|+|+.+|.. +..+++|++|+|++|+|+.+|.. +..+++|+.|+|++|+|+.+|..
T Consensus 71 --------~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 142 (208)
T 2o6s_A 71 --------VFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDG 142 (208)
T ss_dssp --------TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTT
T ss_pred --------hcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHH
Confidence 122333344444444444433322 34444444444444444443322 34444444444444444444332
Q ss_pred -ccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCC
Q 001143 229 -LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 229 -l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~ 271 (1141)
+..+++|+.|+|++|.+++ .+++|++|+++.|.+++
T Consensus 143 ~~~~l~~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g 179 (208)
T 2o6s_A 143 VFDRLTSLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSG 179 (208)
T ss_dssp TTTTCTTCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTT
T ss_pred HhccCCCccEEEecCCCeec-------CCCCHHHHHHHHHhCCc
Confidence 3334444444444443332 22344444444454444
No 359
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=4.7e-18 Score=183.76 Aligned_cols=154 Identities=23% Similarity=0.234 Sum_probs=128.6
Q ss_pred CcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEcc
Q 001143 93 LRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVC 172 (1141)
Q Consensus 93 L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls 172 (1141)
.+.+++++|.++.+|..+. ++|+.|+|++|.+..+ .|..|.++++|+.|+|+
T Consensus 21 ~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~--------------------------~~~~~~~l~~L~~L~L~ 72 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKL--------------------------EPGVFDSLINLKELYLG 72 (229)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCC--------------------------CTTTTTTCTTCCEEECC
T ss_pred CCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCcc--------------------------CHHHhhCccCCcEEECC
Confidence 5668888888888876553 5666666655553332 24467778889999999
Q ss_pred CCCCCccCc-cccCCCCCCEEEccCCcccccccc-ccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCc
Q 001143 173 HFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 173 ~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
+|+|+.+|. .|..+++|+.|+|++|+|+.+|.. |..+++|+.|+|++|+|+.||..+..+++|+.|+|++|+|+++++
T Consensus 73 ~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 73 SNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred CCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCH
Confidence 999998875 468899999999999999988754 688999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCEEEccCCcCCCCCC
Q 001143 251 LDLCLMHNLQNLNLQYNKLLSYCQ 274 (1141)
Q Consensus 251 ~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1141)
..|..+++|+.|+|++|+|.|.|+
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTTBG
T ss_pred HHHhCCCCCCEEEeeCCCccCCcc
Confidence 889999999999999999999775
No 360
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.76 E-value=4.3e-18 Score=180.56 Aligned_cols=176 Identities=17% Similarity=0.163 Sum_probs=105.7
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-ccCCcCCcEEEccCCCCCcCchh-hcCCCCCCEEEc
Q 001143 44 SVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VGRYEKLRNLKFFGNEINLFPSE-VGNLLGLECLQI 121 (1141)
Q Consensus 44 ~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~~L~~L~~L~Ls~N~L~~lP~~-~~~L~~L~~L~L 121 (1141)
+.+++++++++..+... .++|++|+|++|.|+.+|.. |..+++|++|+|++|+|+.+|.. |.++++|++|+|
T Consensus 10 ~~v~c~~~~l~~~p~~~------~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGI------PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNL 83 (208)
T ss_dssp TEEECCSSCCSSCCSCC------CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CEEEecCCCccCCCCCC------CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEEC
Confidence 56777788777654321 25678888888888877653 67788888888888888877654 567788888887
Q ss_pred cCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-ccCCCCCCEEEccCCccc
Q 001143 122 KISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMK 200 (1141)
Q Consensus 122 s~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~ 200 (1141)
++|.++.++.. .|..+++|+.|++++|+|+.+|.. +..+++|+.|+|++|+|+
T Consensus 84 s~n~l~~~~~~--------------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 137 (208)
T 2o6s_A 84 STNQLQSLPNG--------------------------VFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLK 137 (208)
T ss_dssp CSSCCCCCCTT--------------------------TTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCS
T ss_pred CCCcCCccCHh--------------------------HhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccc
Confidence 77775544421 233344455555555555544332 445555555555555555
Q ss_pred ccccc-ccCCCCCCEEEccCCCCCcCCcCccCCCCCCEEeCCCCCCCCCCcccccCCC
Q 001143 201 YLPTE-ICYLKALISLKVANNKLVELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMH 257 (1141)
Q Consensus 201 ~iP~~-l~~l~~L~~L~Ls~N~L~~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~ 257 (1141)
.+|.. +..+++|+.|+|++|.+. +.+++|+.|+++.|+++|.+|..++.++
T Consensus 138 ~~~~~~~~~l~~L~~L~l~~N~~~------~~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 138 SVPDGVFDRLTSLQYIWLHDNPWD------CTCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp CCCTTTTTTCTTCCEEECCSCCBC------CCTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred eeCHHHhccCCCccEEEecCCCee------cCCCCHHHHHHHHHhCCceeeccCcccc
Confidence 44433 445555555555555443 2234555556666666665555555444
No 361
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.7e-17 Score=179.33 Aligned_cols=153 Identities=22% Similarity=0.243 Sum_probs=118.2
Q ss_pred ccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcC-chhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001143 70 VEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLF-PSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1141)
Q Consensus 70 L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~l-P~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ 148 (1141)
.+.++.++|.++.||..+. ++|++|+|++|+|+.+ |..|.++++|+.|+|++|.++.++.
T Consensus 21 ~~~v~c~~~~l~~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~----------------- 81 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPV----------------- 81 (229)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT-----------------
T ss_pred CCEeEccCCCcCccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcCh-----------------
Confidence 4567788888888877654 5788888888888766 5567777777777777776544431
Q ss_pred CCCCcccchhhhcCCCCCcEEEccCCCCCccCcc-ccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCc
Q 001143 149 PRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS 227 (1141)
Q Consensus 149 ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~ 227 (1141)
..|..+++|+.|+|++|+|+.+|.. |..+++|+.|+|++|+|+.+|..+..+++|+.|+|++|+|+.+|.
T Consensus 82 ---------~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 82 ---------GVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp ---------TTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCSCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred ---------hhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccccCcccccCCCCCEEECCCCcCCccCH
Confidence 2345667788888888888877654 578889999999999999888888889999999999999998864
Q ss_pred -CccCCCCCCEEeCCCCCCCCCCc
Q 001143 228 -GLYLLQRLENLDLSNNRLTSLGS 250 (1141)
Q Consensus 228 -~l~~L~~L~~L~Ls~N~Lt~~~p 250 (1141)
.+..+++|+.|+|++|.+++..+
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTTBG
T ss_pred HHHhCCCCCCEEEeeCCCccCCcc
Confidence 46778999999999999887654
No 362
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.74 E-value=5.3e-19 Score=222.57 Aligned_cols=218 Identities=16% Similarity=0.075 Sum_probs=90.2
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCC--CccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCE
Q 001143 41 DDDSVIDVSGKTVDFPLIESYGNRGGDN--SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLEC 118 (1141)
Q Consensus 41 ~~L~~LdLs~N~Ls~~~p~~~~~l~~L~--~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~ 118 (1141)
+.++.|+|++|.+.......+..+ .|. +|..++++.|++...|..|..++.|+.|+|++|.|..||..+++|++|+.
T Consensus 173 ~~~~~l~L~~n~~~~~~~~~l~~l-~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~ 251 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQALLQHK-KLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTR 251 (727)
T ss_dssp --------------------------------------------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSC
T ss_pred CccceEEeeCCCCCcchhhHhhcC-ccCcccccCccccccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCE
Confidence 457778888887776432211111 111 12233344444444455677777777888888877777777777777777
Q ss_pred EEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCc
Q 001143 119 LQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNK 198 (1141)
Q Consensus 119 L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~ 198 (1141)
|+|++|.++.+|..|..|++|++|+|++|.+. .+|..|+.|++|+.|+|++|.|+.||..|+.|++|+.|+|++|.
T Consensus 252 L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~----~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 252 LYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT----SLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp CBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS----SCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSC
T ss_pred EEeeCCcCcccChhhhCCCCCCEEeCcCCcCC----ccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCc
Confidence 77777777666666666667777777665443 44566666666777777777666666666666677777777777
Q ss_pred cc-cccccccCCC-CCCEEEccCCCCC-cCCcCccCCCCCCEEeCCCC--------CCCCCCcccccCCCCCCEEEccCC
Q 001143 199 MK-YLPTEICYLK-ALISLKVANNKLV-ELPSGLYLLQRLENLDLSNN--------RLTSLGSLDLCLMHNLQNLNLQYN 267 (1141)
Q Consensus 199 L~-~iP~~l~~l~-~L~~L~Ls~N~L~-~IP~~l~~L~~L~~L~Ls~N--------~Lt~~~p~~l~~L~~L~~L~Ls~N 267 (1141)
|+ .+|..+..+. .+..|+|++|.++ .+|. .|..|+|+.| .|++..+..+..+..+....+++|
T Consensus 328 l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~N 401 (727)
T 4b8c_D 328 LEKQFLKILTEKSVTGLIFYLRDNRPEIPLPH------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYN 401 (727)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------C-----------------------------------------
T ss_pred cCCCChHHHhhcchhhhHHhhccCcccCcCcc------ccceeEeecccccccccCCccccccchhhcccccceeeeecc
Confidence 66 3444444332 1223566666665 4443 2344445554 333333333344444444455555
Q ss_pred cC
Q 001143 268 KL 269 (1141)
Q Consensus 268 ~L 269 (1141)
-+
T Consensus 402 il 403 (727)
T 4b8c_D 402 TL 403 (727)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 363
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.74 E-value=6.8e-18 Score=177.90 Aligned_cols=108 Identities=20% Similarity=0.270 Sum_probs=67.8
Q ss_pred hcCCCCCcEEEccCCCCCc-cCccccCCCCCCEEEccCCccc-cccccccCCCCCCEEEccCCC-CCcCCcCccCCCCCC
Q 001143 160 IAGLKCLTKLSVCHFSIRY-LPPEIGCLSNLEQLDLSFNKMK-YLPTEICYLKALISLKVANNK-LVELPSGLYLLQRLE 236 (1141)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~-iP~~l~~l~~L~~L~Ls~N~L~-~iP~~l~~l~~L~~L~Ls~N~-L~~IP~~l~~L~~L~ 236 (1141)
+..+++|+.|++++|+++. .|..++.+++|++|+|++|+|+ ..|..+..+++|+.|+|++|+ ++.+| .+..+++|+
T Consensus 84 l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~ 162 (197)
T 4ezg_A 84 ISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELK 162 (197)
T ss_dssp GTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCC
T ss_pred hhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCC
Confidence 4455566666666666663 4555666666666666666666 345666666667777777665 66665 466666677
Q ss_pred EEeCCCCCCCCCCcccccCCCCCCEEEccCCcCC
Q 001143 237 NLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLL 270 (1141)
Q Consensus 237 ~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~ 270 (1141)
.|+|++|++++++ .+..+++|+.|++++|++.
T Consensus 163 ~L~l~~n~i~~~~--~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 163 SLNIQFDGVHDYR--GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp EEECTTBCCCCCT--TGGGCSSCCEEEECBC---
T ss_pred EEECCCCCCcChH--HhccCCCCCEEEeeCcccC
Confidence 7777777776654 4666677777777777654
No 364
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=5.1e-20 Score=225.36 Aligned_cols=203 Identities=18% Similarity=0.180 Sum_probs=158.8
Q ss_pred CCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC-------------CC-ccCccccCCcCCcEEE-ccCC
Q 001143 37 VNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV-------------LN-LIPKSVGRYEKLRNLK-FFGN 101 (1141)
Q Consensus 37 f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~-------------Lt-~iP~~l~~L~~L~~L~-Ls~N 101 (1141)
+..+++|+.|+|++|+|+ .+|+.++.+ ++|+.|++++|. +. .+|..+.+|++|+.|+ ++.|
T Consensus 345 ~~~~~~L~~L~Ls~n~L~-~Lp~~i~~l---~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n 420 (567)
T 1dce_A 345 SATDEQLFRCELSVEKST-VLQSELESC---KELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA 420 (567)
T ss_dssp CSTTTTSSSCCCCHHHHH-HHHHHHHHH---HHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHH
T ss_pred cccCccceeccCChhhHH-hhHHHHHHH---HHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhc
Confidence 367889999999999998 567777766 899999997774 33 5567789999999999 7888
Q ss_pred CCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc
Q 001143 102 EINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP 181 (1141)
Q Consensus 102 ~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~ 181 (1141)
.+..++. +.+++|.++.++. ..|+.|+|++|.+.. +|. |+.+++|+.|+|++|+|+.+|.
T Consensus 421 ~~~~L~~----------l~l~~n~i~~l~~-----~~L~~L~Ls~n~l~~----lp~-~~~l~~L~~L~Ls~N~l~~lp~ 480 (567)
T 1dce_A 421 YLDDLRS----------KFLLENSVLKMEY-----ADVRVLHLAHKDLTV----LCH-LEQLLLVTHLDLSHNRLRALPP 480 (567)
T ss_dssp HHHHHHH----------HHHHHHHHHHHHH-----TTCSEEECTTSCCSS----CCC-GGGGTTCCEEECCSSCCCCCCG
T ss_pred ccchhhh----------hhhhcccccccCc-----cCceEEEecCCCCCC----CcC-ccccccCcEeecCcccccccch
Confidence 7654443 2334444333332 136777777765543 454 7788889999999999998898
Q ss_pred cccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcC--CcCccCCCCCCEEeCCCCCCCCCCccc---ccCC
Q 001143 182 EIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVEL--PSGLYLLQRLENLDLSNNRLTSLGSLD---LCLM 256 (1141)
Q Consensus 182 ~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~I--P~~l~~L~~L~~L~Ls~N~Lt~~~p~~---l~~L 256 (1141)
.++.+++|+.|+|++|+|+.|| .++.+++|+.|+|++|+|+.+ |..++.|++|+.|+|++|+|++.+|.. +..+
T Consensus 481 ~~~~l~~L~~L~Ls~N~l~~lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~l 559 (567)
T 1dce_A 481 ALAALRCLEVLQASDNALENVD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 559 (567)
T ss_dssp GGGGCTTCCEEECCSSCCCCCG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHC
T ss_pred hhhcCCCCCEEECCCCCCCCCc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHC
Confidence 8999999999999999999888 888999999999999999877 888999999999999999999887732 3347
Q ss_pred CCCCEEEc
Q 001143 257 HNLQNLNL 264 (1141)
Q Consensus 257 ~~L~~L~L 264 (1141)
++|+.|++
T Consensus 560 p~L~~L~l 567 (567)
T 1dce_A 560 PSVSSILT 567 (567)
T ss_dssp TTCSEEEC
T ss_pred cccCccCC
Confidence 88888875
No 365
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=1.7e-17 Score=174.78 Aligned_cols=150 Identities=19% Similarity=0.249 Sum_probs=89.1
Q ss_pred CCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCC
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKV 147 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N 147 (1141)
++|++|+|++|.|+.+| .+..+++|++|+|++|.++.++ .+..+++|++|+|++|.++
T Consensus 44 ~~L~~L~l~~n~i~~l~-~l~~l~~L~~L~l~~n~~~~~~-~l~~l~~L~~L~l~~n~l~-------------------- 101 (197)
T 4ezg_A 44 NSLTYITLANINVTDLT-GIEYAHNIKDLTINNIHATNYN-PISGLSNLERLRIMGKDVT-------------------- 101 (197)
T ss_dssp HTCCEEEEESSCCSCCT-TGGGCTTCSEEEEESCCCSCCG-GGTTCTTCCEEEEECTTCB--------------------
T ss_pred CCccEEeccCCCccChH-HHhcCCCCCEEEccCCCCCcch-hhhcCCCCCEEEeECCccC--------------------
Confidence 45555555555555555 4555555555555555554443 3444555555555444432
Q ss_pred CCCCCcccchhhhcCCCCCcEEEccCCCCCc-cCccccCCCCCCEEEccCCc-cccccccccCCCCCCEEEccCCCCCcC
Q 001143 148 PPRPSVLTLLSEIAGLKCLTKLSVCHFSIRY-LPPEIGCLSNLEQLDLSFNK-MKYLPTEICYLKALISLKVANNKLVEL 225 (1141)
Q Consensus 148 ~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~-iP~~l~~l~~L~~L~Ls~N~-L~~iP~~l~~l~~L~~L~Ls~N~L~~I 225 (1141)
...|..++.+++|+.|++++|+++. .|..++.+++|+.|+|++|. ++.+| .+..+++|+.|+|++|+++.+
T Consensus 102 ------~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~ 174 (197)
T 4ezg_A 102 ------SDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY 174 (197)
T ss_dssp ------GGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC
T ss_pred ------cccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh
Confidence 2233445566666666777776663 45566677777777777776 66665 566777777777777777766
Q ss_pred CcCccCCCCCCEEeCCCCCCCC
Q 001143 226 PSGLYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 226 P~~l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
| .+..+++|+.|+|++|++.+
T Consensus 175 ~-~l~~l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 175 R-GIEDFPKLNQLYAFSQTIGG 195 (197)
T ss_dssp T-TGGGCSSCCEEEECBC----
T ss_pred H-HhccCCCCCEEEeeCcccCC
Confidence 6 56667777777777777653
No 366
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.73 E-value=1.4e-17 Score=192.41 Aligned_cols=173 Identities=22% Similarity=0.228 Sum_probs=123.7
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCcc-cc-CCcCCcEEEccCCCCCcCc-hhhcCCCCCCEE
Q 001143 43 DSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKS-VG-RYEKLRNLKFFGNEINLFP-SEVGNLLGLECL 119 (1141)
Q Consensus 43 L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~-l~-~L~~L~~L~Ls~N~L~~lP-~~~~~L~~L~~L 119 (1141)
-+++++++|+|+.++.. +. ..|+.|+|++|+|+.+|.. |. ++++|+.|+|++|+|+.++ ..|.++++|+.|
T Consensus 20 ~~~l~c~~~~l~~iP~~-~~-----~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 93 (361)
T 2xot_A 20 SNILSCSKQQLPNVPQS-LP-----SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYL 93 (361)
T ss_dssp TTEEECCSSCCSSCCSS-CC-----TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CCEEEeCCCCcCccCcc-CC-----CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEE
Confidence 36899999999875432 32 4689999999999988764 55 8999999999999999886 458888898888
Q ss_pred EccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCcc-CccccCCCCCCEEEccCCc
Q 001143 120 QIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNK 198 (1141)
Q Consensus 120 ~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~ 198 (1141)
+|++|++..++. ..|.++++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+
T Consensus 94 ~Ls~N~l~~~~~--------------------------~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~ 147 (361)
T 2xot_A 94 DLSSNHLHTLDE--------------------------FLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQ 147 (361)
T ss_dssp ECCSSCCCEECT--------------------------TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ECCCCcCCcCCH--------------------------HHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCc
Confidence 888887655442 2345556666666666666655 4456677777777777777
Q ss_pred cccccccc----cCCCCCCEEEccCCCCCcCCc-CccCCCC--CCEEeCCCCCCCC
Q 001143 199 MKYLPTEI----CYLKALISLKVANNKLVELPS-GLYLLQR--LENLDLSNNRLTS 247 (1141)
Q Consensus 199 L~~iP~~l----~~l~~L~~L~Ls~N~L~~IP~-~l~~L~~--L~~L~Ls~N~Lt~ 247 (1141)
|+.+|..+ ..+++|+.|+|++|+|+.+|. .+..++. |+.|+|++|.+..
T Consensus 148 l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 148 ISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred CCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 77776554 457777777777777777763 4445555 3677888887763
No 367
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.71 E-value=2.2e-17 Score=181.90 Aligned_cols=142 Identities=15% Similarity=0.123 Sum_probs=103.7
Q ss_pred ceEeeeecccCceEEEEEEE--CCcc--EEEEEEecccCCCChH----------------HHHHhHHhHHHHHHHHhhCC
Q 001143 808 LSSCDEAGKSVSSSLFRCKF--GSAD--AAAKVRTLKVCGSSAD----------------EIRNFEYSCLGEVRMLGALR 867 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~--~~~~--vAvKI~~l~~~~~~~~----------------~~~~~~~~~~~Ei~iL~~L~ 867 (1141)
|++.+.||+|+||.||+|.+ .+.. +|+|+.+......... ........+.+|+.++.++.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999998 6778 9999865432111100 00111234589999999998
Q ss_pred CCCc--cceeeeEecCCCCCCCCCCCccccceEEEEEeeccC-C----CHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHH
Q 001143 868 HSCI--VEMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKG-G----SVKNYIEKLSETGEKHVSVKLALFIAQDVAAA 940 (1141)
Q Consensus 868 HpNI--Vkllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~g-g----SL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~g 940 (1141)
|+++ +.+++. . ..+|||||+.+ | +|.++... .++..+..++.||+.|
T Consensus 129 ~~~i~~p~~~~~--~----------------~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~ 182 (258)
T 1zth_A 129 EAGVSVPQPYTY--M----------------KNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVEN 182 (258)
T ss_dssp HTTCCCCCEEEE--E----------------TTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHH
T ss_pred hCCCCCCeEEEc--C----------------CCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHH
Confidence 8764 333332 1 12899999942 3 77766432 2345678899999999
Q ss_pred HHHHH-HCCccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 941 LVELH-SKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 941 L~yLH-s~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
|.||| +.||+||||||+|||++. .++|+|||+|..
T Consensus 183 l~~lH~~~givHrDlkp~NILl~~---------~~~liDFG~a~~ 218 (258)
T 1zth_A 183 VKRLYQEAELVHADLSEYNIMYID---------KVYFIDMGQAVT 218 (258)
T ss_dssp HHHHHHTSCEECSSCSTTSEEESS---------SEEECCCTTCEE
T ss_pred HHHHHHHCCEEeCCCCHHHEEEcC---------cEEEEECccccc
Confidence 99999 999999999999999974 499999999964
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=2.8e-18 Score=216.00 Aligned_cols=152 Identities=20% Similarity=0.108 Sum_probs=52.6
Q ss_pred CCccEEEeecCCCCccCccccCCcC-----CcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEE
Q 001143 68 NSVEGLYLYKNVLNLIPKSVGRYEK-----LRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKEL 142 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP~~l~~L~~-----L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L 142 (1141)
+.++.|.|.+|.+..+|..+....+ +..++++.|.+...|..|..+++|+.|+|++|.+..+|..+..+++|++|
T Consensus 173 ~~~~~l~L~~n~~~~~~~~~l~~l~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~~l~~~~~~l~~L~~L 252 (727)
T 4b8c_D 173 PLTPKIELFANGKDEANQALLQHKKLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIFNISANIFKYDFLTRL 252 (727)
T ss_dssp -------------------------------------------------CCCCCCEEECTTSCCSCCCGGGGGCCSCSCC
T ss_pred CccceEEeeCCCCCcchhhHhhcCccCcccccCccccccceecChhhhccCCCCcEEECCCCCCCCCChhhcCCCCCCEE
Confidence 4578889988888877654432222 22233333444433444555555665555555555555444444444444
Q ss_pred ECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCC
Q 001143 143 ELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKL 222 (1141)
Q Consensus 143 ~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L 222 (1141)
+|++|.+. .+|..|++|++|+.|+|++|.|+.||..|+.|++|++|+|++|.|+.||..|+.+++|+.|+|++|.|
T Consensus 253 ~Ls~N~l~----~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 253 YLNGNSLT----ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp BCTTSCCS----CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCCCCCSSTTSCTTCCCEECTTSCC
T ss_pred EeeCCcCc----ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCCccChhhhcCCCccEEeCCCCcc
Confidence 44443332 33444444444444444444444444444444444444444444444444444444444444444444
Q ss_pred C
Q 001143 223 V 223 (1141)
Q Consensus 223 ~ 223 (1141)
+
T Consensus 329 ~ 329 (727)
T 4b8c_D 329 E 329 (727)
T ss_dssp C
T ss_pred C
Confidence 4
No 369
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.69 E-value=1.8e-16 Score=170.36 Aligned_cols=149 Identities=21% Similarity=0.255 Sum_probs=122.3
Q ss_pred cEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCC
Q 001143 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPP 149 (1141)
Q Consensus 71 ~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~l 149 (1141)
+.+++++|.|+.||..+. ++|+.|+|++|+|+.+|. .|.++++|+.|+|++|.+..+
T Consensus 14 ~~v~c~~~~l~~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~-------------------- 71 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISEL-------------------- 71 (220)
T ss_dssp TEEECTTSCCSSCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEE--------------------
T ss_pred CEEEcCCCCcCcCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCc--------------------
Confidence 679999999999998775 589999999999998865 688888888888887775433
Q ss_pred CCCcccchhhhcCCCCCcEEEccCCCCCccCcc-ccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCCc
Q 001143 150 RPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPS 227 (1141)
Q Consensus 150 n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP~ 227 (1141)
.|..|.++++|+.|+|++|+|+.+|.. |..+++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.+|.
T Consensus 72 ------~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 145 (220)
T 2v9t_B 72 ------APDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAK 145 (220)
T ss_dssp ------CTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCT
T ss_pred ------CHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECH
Confidence 244567777888888888888888764 57788889999999988866 5678888899999999999988765
Q ss_pred -CccCCCCCCEEeCCCCCCCC
Q 001143 228 -GLYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 228 -~l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
.+..+++|+.|+|++|.+..
T Consensus 146 ~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 146 GTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp TTTTTCTTCCEEECCSSCEEC
T ss_pred HHHhCCCCCCEEEeCCCCcCC
Confidence 47778899999999998865
No 370
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.68 E-value=2.5e-16 Score=169.24 Aligned_cols=148 Identities=18% Similarity=0.207 Sum_probs=91.1
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc--cccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEEE
Q 001143 44 SVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK--SVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQ 120 (1141)
Q Consensus 44 ~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~--~l~~L~~L~~L~Ls~N~L~~lP~-~~~~L~~L~~L~ 120 (1141)
+.|++++|+|+.+ |..+. ..+++|+|++|+|+.++. .|..+++|+.|+|++|+|+.++. .|.++++|++|+
T Consensus 14 ~~l~~s~n~l~~i-P~~~~-----~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~ 87 (220)
T 2v70_A 14 TTVDCSNQKLNKI-PEHIP-----QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEIL 87 (220)
T ss_dssp TEEECCSSCCSSC-CSCCC-----TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEE
T ss_pred CEeEeCCCCcccC-ccCCC-----CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEE
Confidence 4666777766653 32222 345667777777766532 35666667777777777665543 466666666666
Q ss_pred ccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCcc-CccccCCCCCCEEEccCCcc
Q 001143 121 IKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKM 199 (1141)
Q Consensus 121 Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L 199 (1141)
|++|.++.++ +..|.++++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|
T Consensus 88 Ls~N~l~~~~--------------------------~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 141 (220)
T 2v70_A 88 LTSNRLENVQ--------------------------HKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQI 141 (220)
T ss_dssp CCSSCCCCCC--------------------------GGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCC
T ss_pred CCCCccCccC--------------------------HhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcC
Confidence 6666544433 23455566666666666666655 44566667777777777777
Q ss_pred ccc-cccccCCCCCCEEEccCCCCC
Q 001143 200 KYL-PTEICYLKALISLKVANNKLV 223 (1141)
Q Consensus 200 ~~i-P~~l~~l~~L~~L~Ls~N~L~ 223 (1141)
+.+ |..|..+++|+.|+|++|.++
T Consensus 142 ~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 142 TTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CEECHHHhcCCCCCCEEEecCcCCc
Confidence 655 556666777777777777665
No 371
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=2.9e-16 Score=165.10 Aligned_cols=137 Identities=18% Similarity=0.272 Sum_probs=114.5
Q ss_pred CEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCcc--ccCCCCCCEEEccCCccccc-cccccCCCCCCEEE
Q 001143 140 KELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPE--IGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLK 216 (1141)
Q Consensus 140 ~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~--l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~ 216 (1141)
+.|++++|.+. .+|..+.. +|+.|+|++|+|+.+|.. ++.+++|+.|+|++|+|+.+ |..|..+++|++|+
T Consensus 11 ~~l~~s~~~l~----~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 84 (192)
T 1w8a_A 11 TTVDCTGRGLK----EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQ 84 (192)
T ss_dssp TEEECTTSCCS----SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEE
T ss_pred CEEEcCCCCcC----cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEE
Confidence 45666664442 34443322 789999999999988763 88999999999999999976 78899999999999
Q ss_pred ccCCCCCcCCc-CccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhc
Q 001143 217 VANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCN 282 (1141)
Q Consensus 217 Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~ 282 (1141)
|++|+|+.+|. .+..+++|+.|+|++|+|++++|..|..+++|+.|+|++|+|+|.|++.+...|.
T Consensus 85 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l 151 (192)
T 1w8a_A 85 LGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWL 151 (192)
T ss_dssp CCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHH
T ss_pred CCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHH
Confidence 99999997754 5788999999999999999999999999999999999999999988766544443
No 372
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.66 E-value=7.1e-16 Score=162.46 Aligned_cols=139 Identities=20% Similarity=0.234 Sum_probs=117.2
Q ss_pred CEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCcccccc-ccccCCCCCCEEEcc
Q 001143 140 KELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVA 218 (1141)
Q Consensus 140 ~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls 218 (1141)
+.+++++|.+. .+|..+ .++|+.|+|++|+|+.+|..|..+++|+.|+|++|+|+.++ ..|..+++|+.|+|+
T Consensus 13 ~~l~~~~~~l~----~ip~~~--~~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls 86 (193)
T 2wfh_A 13 TVVRCSNKGLK----VLPKGI--PRDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86 (193)
T ss_dssp TEEECTTSCCS----SCCSCC--CTTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCCC----cCCCCC--CCCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECC
Confidence 45566654443 334333 24789999999999999999999999999999999999886 568999999999999
Q ss_pred CCCCCcCCc-CccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhccc
Q 001143 219 NNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLE 284 (1141)
Q Consensus 219 ~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~ 284 (1141)
+|+|+.+|. .|..+++|+.|+|++|+|+++++..|..+++|+.|+|++|+|.|.|.+.+...|...
T Consensus 87 ~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c~l~~l~~~~~~ 153 (193)
T 2wfh_A 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDCNMQWLSDWVKS 153 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSGGGHHHHHHHHH
T ss_pred CCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCCcCHHHHHHHHh
Confidence 999998864 688899999999999999999998899999999999999999999987665555443
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=6.5e-16 Score=175.84 Aligned_cols=100 Identities=13% Similarity=0.153 Sum_probs=79.7
Q ss_pred CCCCcEEEccCCCCCccCc-cccCCCCCCEEEccCCcccccc-ccccCCCCCC-EEEccCCCCCcCC-cCccCCCCCCEE
Q 001143 163 LKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALI-SLKVANNKLVELP-SGLYLLQRLENL 238 (1141)
Q Consensus 163 L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~-~L~Ls~N~L~~IP-~~l~~L~~L~~L 238 (1141)
+++|+.|+|++|+++.||. .|..+++|+.|+|.+| ++.|+ .+|..+++|+ .|+|.+ +++.|+ ..|.+|++|+.|
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 6788888888888888866 5778888888888887 77775 4577788888 888887 777774 566678888888
Q ss_pred eCCCCCCCCCCcccccCCCCCCEEEc
Q 001143 239 DLSNNRLTSLGSLDLCLMHNLQNLNL 264 (1141)
Q Consensus 239 ~Ls~N~Lt~~~p~~l~~L~~L~~L~L 264 (1141)
+|++|+++.+.+..|.++++|+.|+.
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred EeCCCccCccchhhhcCCcchhhhcc
Confidence 88888888888888888888888764
No 374
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.63 E-value=2.3e-17 Score=201.66 Aligned_cols=277 Identities=14% Similarity=-0.042 Sum_probs=152.6
Q ss_pred CCcccccCCCCCccccCC----CCCCCCCCCCEEEccCCCCCCCCcccc------------------------cCCCCCC
Q 001143 17 PIKEKLPSEANKINNEKN----GSVNDDDDDSVIDVSGKTVDFPLIESY------------------------GNRGGDN 68 (1141)
Q Consensus 17 ~~l~~L~~~~N~i~~i~~----~~f~~l~~L~~LdLs~N~Ls~~~p~~~------------------------~~l~~L~ 68 (1141)
+.++.|.+..|.++.+.. ..+.++++|+.|+|++|.+++ ++..+ ..+..++
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~ 270 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPR 270 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCT
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccc
Confidence 367777777777764432 234466777777777776654 22222 2333445
Q ss_pred CccEEEeecCCCCccCccccCCcCCcEEEccCCCCC--cCchhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECC
Q 001143 69 SVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEIN--LFPSEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELS 145 (1141)
Q Consensus 69 ~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~--~lP~~~~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls 145 (1141)
+|+.|+++++....+|..+..+++|+.|+|++|.++ .++..+.++++|+.|+|+++. -..++..+..+++|++|+++
T Consensus 271 ~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~ 350 (592)
T 3ogk_B 271 KLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIE 350 (592)
T ss_dssp TCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEE
T ss_pred cccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEee
Confidence 555555555544556666666777777777777765 223335667777777776222 11122234556677777777
Q ss_pred C--------CCCCCCcc-cchhhhcCCCCCcEEEccCCCCC-ccCccccC-CCCCCEEEcc----CCcccccc------c
Q 001143 146 K--------VPPRPSVL-TLLSEIAGLKCLTKLSVCHFSIR-YLPPEIGC-LSNLEQLDLS----FNKMKYLP------T 204 (1141)
Q Consensus 146 ~--------N~ln~~~~-~lp~~l~~L~~L~~L~Ls~N~L~-~iP~~l~~-l~~L~~L~Ls----~N~L~~iP------~ 204 (1141)
+ +..+.... .++..+..+++|+.|+++.|+++ ..+..++. +++|+.|+|+ .|.++..| .
T Consensus 351 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~ 430 (592)
T 3ogk_B 351 RGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRS 430 (592)
T ss_dssp CCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHH
T ss_pred cCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHH
Confidence 2 00111111 12222344667777777667666 23344433 6677777774 56666432 2
Q ss_pred cccCCCCCCEEEccCC--CCC-cCCcCccC-CCCCCEEeCCCCCCCCC-CcccccCCCCCCEEEccCCcCCCCCCCchhh
Q 001143 205 EICYLKALISLKVANN--KLV-ELPSGLYL-LQRLENLDLSNNRLTSL-GSLDLCLMHNLQNLNLQYNKLLSYCQVPSWI 279 (1141)
Q Consensus 205 ~l~~l~~L~~L~Ls~N--~L~-~IP~~l~~-L~~L~~L~Ls~N~Lt~~-~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~ 279 (1141)
.+..+++|+.|+|++| .++ ..+..++. +++|+.|+|++|++++. .+..+..+++|+.|+|++|+++. ..++...
T Consensus 431 ~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~-~~~~~~~ 509 (592)
T 3ogk_B 431 LLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE-RAIAAAV 509 (592)
T ss_dssp HHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH-HHHHHHH
T ss_pred HHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH-HHHHHHH
Confidence 2455667777777643 354 22333332 66677777777777642 23344666777777777777643 1133333
Q ss_pred hhcccCCCCCCCCCCc
Q 001143 280 CCNLEGNGKDSSNDDF 295 (1141)
Q Consensus 280 ~~~l~~~~l~~~~n~l 295 (1141)
.....+..+.+++|.+
T Consensus 510 ~~l~~L~~L~ls~n~i 525 (592)
T 3ogk_B 510 TKLPSLRYLWVQGYRA 525 (592)
T ss_dssp HHCSSCCEEEEESCBC
T ss_pred HhcCccCeeECcCCcC
Confidence 3344455555555543
No 375
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.63 E-value=7e-18 Score=206.29 Aligned_cols=245 Identities=12% Similarity=-0.032 Sum_probs=128.4
Q ss_pred CcccccCCCCCccccCCC----CCCCCCCCCEEEccCCCCCCCCcccccC-CCCCCCccEEEeecCCCCccCccccCCcC
Q 001143 18 IKEKLPSEANKINNEKNG----SVNDDDDDSVIDVSGKTVDFPLIESYGN-RGGDNSVEGLYLYKNVLNLIPKSVGRYEK 92 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~----~f~~l~~L~~LdLs~N~Ls~~~p~~~~~-l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~ 92 (1141)
+++.|.+..|.++..... .+.++++|+.|+|++|.+++.....+.. +.++++|+.|+|++|.++.+|..+.++++
T Consensus 165 ~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~ 244 (592)
T 3ogk_B 165 KIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAAN 244 (592)
T ss_dssp TCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTT
T ss_pred CCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhH
Confidence 455555555555433211 2334556666666666665322211110 12235666666666666555555555555
Q ss_pred CcEEEccCCCCC----cCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcE
Q 001143 93 LRNLKFFGNEIN----LFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTK 168 (1141)
Q Consensus 93 L~~L~Ls~N~L~----~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~ 168 (1141)
|+.|+++.+... ..+..+..+++|+.|+++++....++..+..+++|++|+|++|.+.. ..++..+..+++|+.
T Consensus 245 L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~--~~~~~~~~~~~~L~~ 322 (592)
T 3ogk_B 245 LEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLET--EDHCTLIQKCPNLEV 322 (592)
T ss_dssp CCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCH--HHHHHHHTTCTTCCE
T ss_pred HHhhcccccccccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCH--HHHHHHHHhCcCCCE
Confidence 666655532211 22233445555555555555555566667778888888888865321 122233566777777
Q ss_pred EEccCCCCC--ccCccccCCCCCCEEEcc-----------CCccc--cccccccCCCCCCEEEccCCCCC-cCCcCccC-
Q 001143 169 LSVCHFSIR--YLPPEIGCLSNLEQLDLS-----------FNKMK--YLPTEICYLKALISLKVANNKLV-ELPSGLYL- 231 (1141)
Q Consensus 169 L~Ls~N~L~--~iP~~l~~l~~L~~L~Ls-----------~N~L~--~iP~~l~~l~~L~~L~Ls~N~L~-~IP~~l~~- 231 (1141)
|+++ |.+. .++..+..+++|+.|+|+ .|.++ .++..+..+++|+.|+|+.|+++ ..+..++.
T Consensus 323 L~L~-~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~ 401 (592)
T 3ogk_B 323 LETR-NVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTY 401 (592)
T ss_dssp EEEE-GGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHH
T ss_pred Eecc-CccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhh
Confidence 7776 3333 233333456667777776 35555 23333344666666666666665 33344443
Q ss_pred CCCCCEEeCC----CCCCCCCCc-----ccccCCCCCCEEEcc
Q 001143 232 LQRLENLDLS----NNRLTSLGS-----LDLCLMHNLQNLNLQ 265 (1141)
Q Consensus 232 L~~L~~L~Ls----~N~Lt~~~p-----~~l~~L~~L~~L~Ls 265 (1141)
+++|+.|+|+ .|++++.+. ..+..+++|+.|+|+
T Consensus 402 ~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~ 444 (592)
T 3ogk_B 402 LKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFY 444 (592)
T ss_dssp CCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEE
T ss_pred CCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEe
Confidence 5666666664 556665421 123445555555554
No 376
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.61 E-value=1.6e-15 Score=155.15 Aligned_cols=134 Identities=20% Similarity=0.132 Sum_probs=83.6
Q ss_pred CCccEEEeecCCCC--ccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECC
Q 001143 68 NSVEGLYLYKNVLN--LIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELS 145 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt--~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls 145 (1141)
++|+.|+|++|.|+ .+|..+..+++|++|+|++|.|+.+ ..|..+++|++|+|++|.+..
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~----------------- 85 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFG----------------- 85 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCS-----------------
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCch-----------------
Confidence 55666777777666 6666666666677777777666655 445555555555555554332
Q ss_pred CCCCCCCcccchhhhcCCCCCcEEEccCCCCCccC--ccccCCCCCCEEEccCCccccccc----cccCCCCCCEEEccC
Q 001143 146 KVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLP--PEIGCLSNLEQLDLSFNKMKYLPT----EICYLKALISLKVAN 219 (1141)
Q Consensus 146 ~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP--~~l~~l~~L~~L~Ls~N~L~~iP~----~l~~l~~L~~L~Ls~ 219 (1141)
. +|..+..+++|+.|++++|.|+.+| ..+..+++|+.|+|++|.|+.+|. .+..+++|+.|++++
T Consensus 86 ------~---~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 86 ------G---LDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp ------C---CCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred ------H---HHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 1 3334444666666666666666654 456666677777777777766654 566667777777777
Q ss_pred CCCCcCCcC
Q 001143 220 NKLVELPSG 228 (1141)
Q Consensus 220 N~L~~IP~~ 228 (1141)
|.+..+|.+
T Consensus 157 n~~~~~~~~ 165 (168)
T 2ell_A 157 REDQEAPDS 165 (168)
T ss_dssp TTSCBCCSS
T ss_pred CChhhcccc
Confidence 776666654
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=2.2e-15 Score=154.11 Aligned_cols=136 Identities=17% Similarity=0.098 Sum_probs=99.4
Q ss_pred CCCCCEEEccCCCCC-CCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEEccCCCCCc-CchhhcCCCCCC
Q 001143 40 DDDDSVIDVSGKTVD-FPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINL-FPSEVGNLLGLE 117 (1141)
Q Consensus 40 l~~L~~LdLs~N~Ls-~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~-lP~~~~~L~~L~ 117 (1141)
.++|+.|+|++|+|+ +.+|..+..+ ++|++|+|++|.|+.+ ..|..+++|++|+|++|+|+. +|..+.++++|+
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l---~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 98 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEF---VNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLT 98 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGG---GGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCC
T ss_pred cccCCEEECCCCCCChhhHHHHHHhC---CCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCC
Confidence 378999999999998 6777766555 8999999999999988 778999999999999999997 787787899999
Q ss_pred EEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc----cccCCCCCCEEE
Q 001143 118 CLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP----EIGCLSNLEQLD 193 (1141)
Q Consensus 118 ~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~----~l~~l~~L~~L~ 193 (1141)
.|+|++|.++.++. +..+..+++|+.|++++|.++.+|. .+..+++|++|+
T Consensus 99 ~L~Ls~N~l~~~~~-------------------------~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~ 153 (168)
T 2ell_A 99 HLNLSGNKLKDIST-------------------------LEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLD 153 (168)
T ss_dssp EEECBSSSCCSSGG-------------------------GGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEET
T ss_pred EEeccCCccCcchh-------------------------HHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEec
Confidence 99999888776551 1233444455555555555554444 445555555555
Q ss_pred ccCCccccccc
Q 001143 194 LSFNKMKYLPT 204 (1141)
Q Consensus 194 Ls~N~L~~iP~ 204 (1141)
+++|.+..+|.
T Consensus 154 l~~n~~~~~~~ 164 (168)
T 2ell_A 154 GYDREDQEAPD 164 (168)
T ss_dssp TEETTSCBCCS
T ss_pred CCCCChhhccc
Confidence 55555555543
No 378
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.57 E-value=5.1e-14 Score=165.12 Aligned_cols=228 Identities=10% Similarity=0.079 Sum_probs=176.6
Q ss_pred CCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCCc
Q 001143 27 NKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEINL 105 (1141)
Q Consensus 27 N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~~ 105 (1141)
|+++.|...+|.+. +|+.++|..| ++.+....|.+ .+|+.+.|.+ .++.|+. .|.++++|+.|+|++|+|+.
T Consensus 122 ~~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~----~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~ 194 (401)
T 4fdw_A 122 NSVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN----STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITK 194 (401)
T ss_dssp TTCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT----CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSE
T ss_pred CccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC----CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceE
Confidence 57888999999985 7999998876 77666655543 3689999986 5888864 68889999999999999999
Q ss_pred CchhhcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-cc
Q 001143 106 FPSEVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EI 183 (1141)
Q Consensus 106 lP~~~~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~-~l 183 (1141)
||......++|+.+.|..| +..++ ..|.++.+|+.|.+..| +...-..+|.+ .+|+.+.+ .|.++.|+. .|
T Consensus 195 I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~----l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF 267 (401)
T 4fdw_A 195 LPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN----VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAF 267 (401)
T ss_dssp ECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT----CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTT
T ss_pred echhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC----ccCcccccccc-CCccEEEe-CCCccEEChhHh
Confidence 9877555789999999855 55444 57889999999999862 22222345666 67888888 566777744 77
Q ss_pred cCCCCCCEEEccCCccc-----ccc-ccccCCCCCCEEEccCCCCCcCCc-CccCCCCCCEEeCCCCCCCCCCcccccCC
Q 001143 184 GCLSNLEQLDLSFNKMK-----YLP-TEICYLKALISLKVANNKLVELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLM 256 (1141)
Q Consensus 184 ~~l~~L~~L~Ls~N~L~-----~iP-~~l~~l~~L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L 256 (1141)
..+++|+.|.|.+|.+. .|+ ..|..+++|+.+.|. |.++.|+. .|.+|++|+.|+|.+| ++.+.+..|.++
T Consensus 268 ~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~ 345 (401)
T 4fdw_A 268 YYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT 345 (401)
T ss_dssp TTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS
T ss_pred hCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC
Confidence 88899999999888876 564 567888999999998 55888854 5556899999999655 888888888888
Q ss_pred CCCCEEEccCCcCCC
Q 001143 257 HNLQNLNLQYNKLLS 271 (1141)
Q Consensus 257 ~~L~~L~Ls~N~L~~ 271 (1141)
+|+.|++++|.+..
T Consensus 346 -~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 346 -GIKEVKVEGTTPPQ 359 (401)
T ss_dssp -CCCEEEECCSSCCB
T ss_pred -CCCEEEEcCCCCcc
Confidence 89999999987665
No 379
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.56 E-value=3.6e-15 Score=172.75 Aligned_cols=150 Identities=18% Similarity=0.148 Sum_probs=100.0
Q ss_pred ceEeeeecccCceEEEEEEE-CCccEEEEEEecccCCCCh--------------HHHHHhHHhHHHHHHHHhhCCCCCcc
Q 001143 808 LSSCDEAGKSVSSSLFRCKF-GSADAAAKVRTLKVCGSSA--------------DEIRNFEYSCLGEVRMLGALRHSCIV 872 (1141)
Q Consensus 808 y~i~~~LG~GsfG~Vy~a~~-~~~~vAvKI~~l~~~~~~~--------------~~~~~~~~~~~~Ei~iL~~L~HpNIV 872 (1141)
|++.+.||+|++|.||+|.+ .+..+|+|+++........ ...........+|...|.++.+..+.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 89999999999999999987 5778999997643222110 00111111234566666666544432
Q ss_pred ceeeeEecCCCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 001143 873 EMYGHKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKHIMHR 952 (1141)
Q Consensus 873 kllg~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHr 952 (1141)
-..-+... ..+|||||++|++|..+. ....+..++.||+.+|.|||++|||||
T Consensus 177 vp~p~~~~----------------~~~LVME~i~G~~L~~l~-----------~~~~~~~l~~qll~~l~~lH~~gIVHr 229 (397)
T 4gyi_A 177 VPEPIAQS----------------RHTIVMSLVDALPMRQVS-----------SVPDPASLYADLIALILRLAKHGLIHG 229 (397)
T ss_dssp CCCEEEEE----------------TTEEEEECCSCEEGGGCC-----------CCSCHHHHHHHHHHHHHHHHHTTEECS
T ss_pred CCeeeecc----------------CceEEEEecCCccHhhhc-----------ccHHHHHHHHHHHHHHHHHHHCCCcCC
Confidence 11111110 127999999988875432 112346788999999999999999999
Q ss_pred CCCCCCeeeecccccCCCC---CeEEEeecccccc
Q 001143 953 DIKSENILIDLERKKADGK---PVVKLCDFDRAVP 984 (1141)
Q Consensus 953 DLKP~NILld~~~~~~~~~---~~vKL~DFGlA~~ 984 (1141)
||||.|||++.++...... ..+.|+||+.+..
T Consensus 230 DLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 230 DFNEFNILIREEKDAEDPSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp CCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCEE
T ss_pred CCCHHHEEEeCCCCcccccccccceEEEEeCCccc
Confidence 9999999998874211111 1489999998864
No 380
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.56 E-value=6.1e-14 Score=164.51 Aligned_cols=237 Identities=9% Similarity=0.074 Sum_probs=184.7
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1141)
.+..+.+..| |+.|...+|.+. +|+.|+|.. .++.+....| .++++|+.|+|++|+++.||.......+|+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF---~~c~~L~~l~l~~n~l~~I~~~aF~~~~L~~l~ 209 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIF---YYCYNLKKADLSKTKITKLPASTFVYAGIEEVL 209 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTT---TTCTTCCEEECTTSCCSEECTTTTTTCCCSEEE
T ss_pred CccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHh---hCcccCCeeecCCCcceEechhhEeecccCEEE
Confidence 4677776544 999999999994 799999986 6776655544 555899999999999999987644568899999
Q ss_pred ccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCc-ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCC
Q 001143 98 FFGNEINLFPS-EVGNLLGLECLQIKISSPGVNG-FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFS 175 (1141)
Q Consensus 98 Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~~~~-~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~ 175 (1141)
|.+| ++.|+. .|.++++|+.|.|..| +..++ ..|.+ .+|+.+.|.. ++...-..+|.+|++|+.|.+.+|.
T Consensus 210 lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp~----~i~~I~~~aF~~c~~L~~l~l~~~~ 282 (401)
T 4fdw_A 210 LPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLPN----GVTNIASRAFYYCPELAEVTTYGST 282 (401)
T ss_dssp CCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEEET----TCCEECTTTTTTCTTCCEEEEESSC
T ss_pred eCCc-hheehhhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEeCC----CccEEChhHhhCCCCCCEEEeCCcc
Confidence 9854 888855 4888999999999876 44444 46666 7899999954 3333334578899999999998887
Q ss_pred CC-----ccCc-cccCCCCCCEEEccCCcccccc-ccccCCCCCCEEEccCCCCCcCC-cCccCCCCCCEEeCCCCCCCC
Q 001143 176 IR-----YLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELP-SGLYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 176 L~-----~iP~-~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~IP-~~l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
+. .|+. .|..+++|+.|.|. |.++.|+ .+|..+++|+.|.|..| ++.|+ ..|.++ +|+.|+|++|.+..
T Consensus 283 ~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~ 359 (401)
T 4fdw_A 283 FNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQ 359 (401)
T ss_dssp CCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCB
T ss_pred ccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcc
Confidence 76 5644 77889999999998 5688886 56778899999999555 88885 556678 99999999999998
Q ss_pred CCcccccCCC-CCCEEEccCCcCC
Q 001143 248 LGSLDLCLMH-NLQNLNLQYNKLL 270 (1141)
Q Consensus 248 ~~p~~l~~L~-~L~~L~Ls~N~L~ 270 (1141)
+.+..|..++ .+..|++..|.+.
T Consensus 360 l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 360 VFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp CCCSSCCCSCTTCCEEEECGGGHH
T ss_pred cccccccCCCCCccEEEeCHHHHH
Confidence 8888888885 7888888877653
No 381
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.54 E-value=6.2e-15 Score=154.86 Aligned_cols=87 Identities=24% Similarity=0.328 Sum_probs=43.0
Q ss_pred CCCCcEEEccCCCCCcc-CccccCCCCCCEEEccCCcccccc-ccccCCCCCCEEEccCCCCCcC-CcCccCCCCCCEEe
Q 001143 163 LKCLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVEL-PSGLYLLQRLENLD 239 (1141)
Q Consensus 163 L~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~I-P~~l~~L~~L~~L~ 239 (1141)
+++|+.|+|++|+|+.+ |..|..+++|++|+|++|+|+.+| ..|..+++|+.|+|++|+|+.+ |..+..+++|+.|+
T Consensus 53 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 132 (192)
T 1w8a_A 53 LPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN 132 (192)
T ss_dssp CTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEE
T ss_pred CCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEE
Confidence 33344444444444433 334444555555555555555433 2344555555555555555533 44455555555555
Q ss_pred CCCCCCCCCC
Q 001143 240 LSNNRLTSLG 249 (1141)
Q Consensus 240 Ls~N~Lt~~~ 249 (1141)
|++|.+++..
T Consensus 133 L~~N~l~c~c 142 (192)
T 1w8a_A 133 LASNPFNCNC 142 (192)
T ss_dssp CTTCCBCCSG
T ss_pred eCCCCccCcC
Confidence 5555555443
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=2.4e-14 Score=147.76 Aligned_cols=129 Identities=27% Similarity=0.322 Sum_probs=106.7
Q ss_pred CCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-cccCCCCCCEEEccCCcccccccc-ccCCCCCCEEE
Q 001143 139 LKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLK 216 (1141)
Q Consensus 139 L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~ 216 (1141)
.+.+++++|.+. .+|..+ .++|+.|++++|+++.+|. .+..+++|++|+|++|+|+.+|.. +..+++|+.|+
T Consensus 9 ~~~l~~~~~~l~----~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 82 (177)
T 2o6r_A 9 GTEIRCNSKGLT----SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILY 82 (177)
T ss_dssp TTEEECCSSCCS----SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEEEecCCCCc----cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEE
Confidence 345666654443 233322 3578999999999998866 468899999999999999988754 68899999999
Q ss_pred ccCCCCCcCCcC-ccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCC
Q 001143 217 VANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYC 273 (1141)
Q Consensus 217 Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~ 273 (1141)
|++|+|+.+|.. +..+++|+.|+|++|+|+++++..+..+++|+.|+|++|+|.|.|
T Consensus 83 l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 83 LHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 999999988765 578999999999999999999877899999999999999999854
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.54 E-value=6.7e-15 Score=147.45 Aligned_cols=127 Identities=25% Similarity=0.249 Sum_probs=89.6
Q ss_pred CCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCcccc-ccccccCCCCCCEE
Q 001143 137 KGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKY-LPTEICYLKALISL 215 (1141)
Q Consensus 137 ~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~-iP~~l~~l~~L~~L 215 (1141)
++|+.|++++|.+.. +.+|..+..+++|+.|++++|.|+.+ ..++.+++|++|+|++|.|+. +|..+..+++|+.|
T Consensus 17 ~~l~~L~l~~n~l~~--~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 17 SDVKELVLDNSRSNE--GKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGCSEEECTTCBCBT--TBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred ccCeEEEccCCcCCh--hHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 445566666533210 24555566677777777777777766 566777778888888888775 66666677778888
Q ss_pred EccCCCCCcCC--cCccCCCCCCEEeCCCCCCCCCCc---ccccCCCCCCEEEccC
Q 001143 216 KVANNKLVELP--SGLYLLQRLENLDLSNNRLTSLGS---LDLCLMHNLQNLNLQY 266 (1141)
Q Consensus 216 ~Ls~N~L~~IP--~~l~~L~~L~~L~Ls~N~Lt~~~p---~~l~~L~~L~~L~Ls~ 266 (1141)
+|++|+|+.+| ..+..+++|+.|+|++|++++.++ ..+..+++|+.|++++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 88888887654 677777888888888888877776 4677778888877763
No 384
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=4.6e-14 Score=145.43 Aligned_cols=107 Identities=27% Similarity=0.324 Sum_probs=98.5
Q ss_pred CcEEEccCCCCCccCccccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCCcC-ccCCCCCCEEeCCCC
Q 001143 166 LTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNN 243 (1141)
Q Consensus 166 L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N 243 (1141)
.+.|++++|+|+.+|..+. ++|+.|+|++|+|+.+ |..|..+++|++|+|++|+|+.+|.. +..+++|+.|+|++|
T Consensus 11 ~~~l~~s~n~l~~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TTEEECTTSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEEeCCCCcCccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 5789999999999998764 8999999999999987 66799999999999999999999776 468999999999999
Q ss_pred CCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001143 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1141)
Q Consensus 244 ~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1141)
+|+++++..|..+++|+.|+|++|+|+|.|+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9999999889999999999999999999764
No 385
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.52 E-value=7.5e-14 Score=146.95 Aligned_cols=125 Identities=23% Similarity=0.269 Sum_probs=58.6
Q ss_pred cEEEeecCCCCccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcc-cccCCCCCCEEECCCCCC
Q 001143 71 EGLYLYKNVLNLIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGF-ALNKLKGLKELELSKVPP 149 (1141)
Q Consensus 71 ~~L~Ls~N~Lt~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~l 149 (1141)
+.+++++|.|++||..+. ++|+.|+|++|+|+.+|..|.++++|+.|+|++|.++.++. .|.++++|++|+|++|.+
T Consensus 13 ~~l~~~~~~l~~ip~~~~--~~l~~L~L~~n~i~~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l 90 (193)
T 2wfh_A 13 TVVRCSNKGLKVLPKGIP--RDVTELYLDGNQFTLVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRL 90 (193)
T ss_dssp TEEECTTSCCSSCCSCCC--TTCCEEECCSSCCCSCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CEEEcCCCCCCcCCCCCC--CCCCEEECCCCcCchhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCcc
Confidence 455556666666655443 35666666666666565555555555555555555443331 233333333333333222
Q ss_pred CCCcccchhhhcCCCCCcEEEccCCCCCccCc-cccCCCCCCEEEccCCccc
Q 001143 150 RPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMK 200 (1141)
Q Consensus 150 n~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~ 200 (1141)
.. ..|..|.++++|+.|+|++|+|+.+|. .|..+++|+.|+|++|.+.
T Consensus 91 ~~---i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 91 RC---IPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp CB---CCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CE---eCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 11 112234444445555555555554433 2344444555555554443
No 386
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.51 E-value=4.5e-16 Score=190.16 Aligned_cols=180 Identities=13% Similarity=0.013 Sum_probs=93.7
Q ss_pred cCCCCCCEEEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEc---------cCCCCCcc
Q 001143 111 GNLLGLECLQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSV---------CHFSIRYL 179 (1141)
Q Consensus 111 ~~L~~L~~L~Ls~N~l~~~~--~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~L---------s~N~L~~i 179 (1141)
..+++|+.|+|++|.++... ..+..+++|++|++++| + ....++.....+++|+.|++ ..|.++..
T Consensus 286 ~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~--~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~ 362 (594)
T 2p1m_B 286 SVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-I--EDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQ 362 (594)
T ss_dssp HHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-G--HHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHH
T ss_pred HhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-c--CHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHH
Confidence 35678888888888744321 23557778888888764 1 11122222334677777766 33444421
Q ss_pred -Cccc-cCCCCCCEEEccCCccc-ccccccc-CCCCCCEEEcc--C----CCCCcCCc------CccCCCCCCEEeCCCC
Q 001143 180 -PPEI-GCLSNLEQLDLSFNKMK-YLPTEIC-YLKALISLKVA--N----NKLVELPS------GLYLLQRLENLDLSNN 243 (1141)
Q Consensus 180 -P~~l-~~l~~L~~L~Ls~N~L~-~iP~~l~-~l~~L~~L~Ls--~----N~L~~IP~------~l~~L~~L~~L~Ls~N 243 (1141)
...+ ..+++|+.|.++.|.++ ..+..+. .+++|+.|+|+ + |.++..|. -+..+++|+.|+|++
T Consensus 363 ~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~- 441 (594)
T 2p1m_B 363 GLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG- 441 (594)
T ss_dssp HHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-
T ss_pred HHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-
Confidence 1122 23566777766666666 2233333 36667777776 3 45554332 133456666666655
Q ss_pred CCCCCCcccccC-CCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCc
Q 001143 244 RLTSLGSLDLCL-MHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDF 295 (1141)
Q Consensus 244 ~Lt~~~p~~l~~-L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l 295 (1141)
.++......+.. +++|+.|+|++|.++.. .++........+..+++.++.+
T Consensus 442 ~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~-~~~~l~~~~~~L~~L~L~~n~~ 493 (594)
T 2p1m_B 442 LLTDKVFEYIGTYAKKMEMLSVAFAGDSDL-GMHHVLSGCDSLRKLEIRDCPF 493 (594)
T ss_dssp SCCHHHHHHHHHHCTTCCEEEEESCCSSHH-HHHHHHHHCTTCCEEEEESCSC
T ss_pred cccHHHHHHHHHhchhccEeeccCCCCcHH-HHHHHHhcCCCcCEEECcCCCC
Confidence 454443334433 56666666666665431 1111112334445555555554
No 387
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=1.4e-14 Score=149.60 Aligned_cols=103 Identities=25% Similarity=0.260 Sum_probs=42.4
Q ss_pred CcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccc-cCCCCCCEEEccCCCCCcCCc--CccCCCCCCEEeCCC
Q 001143 166 LTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEI-CYLKALISLKVANNKLVELPS--GLYLLQRLENLDLSN 242 (1141)
Q Consensus 166 L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l-~~l~~L~~L~Ls~N~L~~IP~--~l~~L~~L~~L~Ls~ 242 (1141)
|+.|++++|.|+.+ ..+..+++|++|+|++|+|+.+|..+ ..+++|+.|+|++|+|+.+|. .+..+++|+.|+|++
T Consensus 44 L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~ 122 (176)
T 1a9n_A 44 FDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILR 122 (176)
T ss_dssp CSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCS
T ss_pred CCEEECCCCCCCcc-cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCCcchhhHhhhcCCCCCEEEecC
Confidence 33333333333333 23333444444444444444333222 334444444444444444433 344444444444444
Q ss_pred CCCCCCCcc---cccCCCCCCEEEccCCcC
Q 001143 243 NRLTSLGSL---DLCLMHNLQNLNLQYNKL 269 (1141)
Q Consensus 243 N~Lt~~~p~---~l~~L~~L~~L~Ls~N~L 269 (1141)
|.++..++. .+..+++|+.|++++|.+
T Consensus 123 N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 123 NPVTNKKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp SGGGGSTTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCCCCcHhHHHHHHHHCCccceeCCCcCCH
Confidence 444433321 244444455555544443
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2.2e-14 Score=148.25 Aligned_cols=134 Identities=19% Similarity=0.175 Sum_probs=104.2
Q ss_pred hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCccc-cCCC
Q 001143 109 EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEI-GCLS 187 (1141)
Q Consensus 109 ~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l-~~l~ 187 (1141)
.+.++++|+.|+|++|.++.++......++|++|++++|.+... ..|..+++|+.|++++|+|+.+|+.+ ..++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i~~~~~~~~~L~~L~Ls~N~l~~~-----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 88 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKL-----DGFPLLRRLKTLLVNNNRICRIGEGLDQALP 88 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSCCCGGGGTTCCSEEECCSSCCCEE-----CCCCCCSSCCEEECCSSCCCEECSCHHHHCT
T ss_pred hcCCcCCceEEEeeCCCCchhHHhhhcCCCCCEEECCCCCCCcc-----cccccCCCCCEEECCCCcccccCcchhhcCC
Confidence 35677888888888888777755333334888888888766532 46778888888888888888887654 7888
Q ss_pred CCCEEEccCCccccccc--cccCCCCCCEEEccCCCCCcCCcC----ccCCCCCCEEeCCCCCCCC
Q 001143 188 NLEQLDLSFNKMKYLPT--EICYLKALISLKVANNKLVELPSG----LYLLQRLENLDLSNNRLTS 247 (1141)
Q Consensus 188 ~L~~L~Ls~N~L~~iP~--~l~~l~~L~~L~Ls~N~L~~IP~~----l~~L~~L~~L~Ls~N~Lt~ 247 (1141)
+|++|+|++|+|+.+|. .+..+++|+.|+|++|.++.+|.. +..+++|+.||++.|.+..
T Consensus 89 ~L~~L~L~~N~i~~~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 89 DLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp TCCEEECCSCCCCCGGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred CCCEEECCCCcCCcchhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 88888888888888876 788888888888888888888775 7778888888888887653
No 389
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.50 E-value=3.7e-14 Score=142.00 Aligned_cols=56 Identities=18% Similarity=0.198 Sum_probs=26.3
Q ss_pred CCccEEEeecCCCC--ccCccccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCC
Q 001143 68 NSVEGLYLYKNVLN--LIPKSVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKIS 124 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt--~iP~~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N 124 (1141)
++|+.|+|++|.++ .+|..+..+++|++|+|++|.|+.+ ..++++++|++|+|++|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n 74 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDN 74 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSS
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCC
Confidence 34555555555554 4444445555555555555555444 33333444444443333
No 390
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.50 E-value=1.7e-13 Score=141.37 Aligned_cols=91 Identities=31% Similarity=0.366 Sum_probs=66.4
Q ss_pred hcCCCCCcEEEccCCCCCccCcc-ccCCCCCCEEEccCCcccccccc-ccCCCCCCEEEccCCCCCcCCcCc-cCCCCCC
Q 001143 160 IAGLKCLTKLSVCHFSIRYLPPE-IGCLSNLEQLDLSFNKMKYLPTE-ICYLKALISLKVANNKLVELPSGL-YLLQRLE 236 (1141)
Q Consensus 160 l~~L~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~iP~~-l~~l~~L~~L~Ls~N~L~~IP~~l-~~L~~L~ 236 (1141)
|..+++|++|++++|+|+.+|.. +..+++|+.|+|++|+|+.+|.. +..+++|+.|+|++|+|+.+|..+ ..+++|+
T Consensus 48 ~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~ 127 (177)
T 2o6r_A 48 FDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQ 127 (177)
T ss_dssp TTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCC
T ss_pred hcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccC
Confidence 34455666666666766666543 56777788888888888766543 577888888888888888777654 5688888
Q ss_pred EEeCCCCCCCCCCc
Q 001143 237 NLDLSNNRLTSLGS 250 (1141)
Q Consensus 237 ~L~Ls~N~Lt~~~p 250 (1141)
.|+|++|.+++..|
T Consensus 128 ~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 128 KIWLHTNPWDCSCP 141 (177)
T ss_dssp EEECCSSCBCCCHH
T ss_pred EEEecCCCeeccCc
Confidence 88888888887665
No 391
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.49 E-value=9.2e-14 Score=143.90 Aligned_cols=107 Identities=26% Similarity=0.346 Sum_probs=98.1
Q ss_pred CcEEEccCCCCCccCccccCCCCCCEEEccCCccccc-cccccCCCCCCEEEccCCCCCcCCcCc-cCCCCCCEEeCCCC
Q 001143 166 LTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYL-PTEICYLKALISLKVANNKLVELPSGL-YLLQRLENLDLSNN 243 (1141)
Q Consensus 166 L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N~L~~IP~~l-~~L~~L~~L~Ls~N 243 (1141)
-+.+++++|+|+.+|..+. ++|+.|+|++|+|+.+ |..|..+++|+.|+|++|+|+.||..+ ..+++|+.|+|++|
T Consensus 14 ~~~l~~~~n~l~~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 14 QTLVNCQNIRLASVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SSEEECCSSCCSSCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CcEEEeCCCCCCccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 4689999999999999765 8999999999999977 667999999999999999999998764 68999999999999
Q ss_pred CCCCCCcccccCCCCCCEEEccCCcCCCCCC
Q 001143 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQ 274 (1141)
Q Consensus 244 ~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~ 274 (1141)
+|+++++..|..+++|+.|+|++|+|.+.|.
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCcccccc
Confidence 9999999789999999999999999999654
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.47 E-value=2.4e-16 Score=166.14 Aligned_cols=109 Identities=19% Similarity=0.131 Sum_probs=48.0
Q ss_pred cccCCcCCcEEEccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCCC
Q 001143 86 SVGRYEKLRNLKFFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKC 165 (1141)
Q Consensus 86 ~l~~L~~L~~L~Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~ 165 (1141)
.|..+++|++|+|++|.|+.+| .+.++++|+.|+|++|.++.+|..+..+++|++|++++|.+.. +| .+..+++
T Consensus 43 ~~~~l~~L~~L~ls~n~l~~l~-~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~----l~-~~~~l~~ 116 (198)
T 1ds9_A 43 TLSTLKACKHLALSTNNIEKIS-SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIAS----LS-GIEKLVN 116 (198)
T ss_dssp HHHHTTTCSEEECSEEEESCCC-CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCC----HH-HHHHHHH
T ss_pred HHhcCCCCCEEECCCCCCcccc-ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCc----CC-ccccCCC
Confidence 4444444444444444444444 4444444444444444433333222222233333333322211 12 2444455
Q ss_pred CcEEEccCCCCCccCc--cccCCCCCCEEEccCCccc
Q 001143 166 LTKLSVCHFSIRYLPP--EIGCLSNLEQLDLSFNKMK 200 (1141)
Q Consensus 166 L~~L~Ls~N~L~~iP~--~l~~l~~L~~L~Ls~N~L~ 200 (1141)
|+.|++++|+|+.+|. .+..+++|+.|+|++|.++
T Consensus 117 L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 117 LRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp SSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred CCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccc
Confidence 5555555555554432 4455555555555555554
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=2.1e-16 Score=166.65 Aligned_cols=110 Identities=26% Similarity=0.263 Sum_probs=83.4
Q ss_pred hhcCCCCCcEEEccCCCCCccCccccCCCCCCEEEccCCccccccccccCCCCCCEEEccCCCCCcCCc--CccCCCCCC
Q 001143 159 EIAGLKCLTKLSVCHFSIRYLPPEIGCLSNLEQLDLSFNKMKYLPTEICYLKALISLKVANNKLVELPS--GLYLLQRLE 236 (1141)
Q Consensus 159 ~l~~L~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~~L~~L~Ls~N~L~~IP~--~l~~L~~L~ 236 (1141)
.+..+++|+.|++++|.|+.+|..+..+++|++|+|++|+|+.+| .+..+++|+.|+|++|+|+.+|. .+..+++|+
T Consensus 65 ~~~~l~~L~~L~l~~n~l~~l~~~~~~~~~L~~L~L~~N~l~~l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~ 143 (198)
T 1ds9_A 65 SLSGMENLRILSLGRNLIKKIENLDAVADTLEELWISYNQIASLS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLE 143 (198)
T ss_dssp CHHHHTTCCEEEEEEEEECSCSSHHHHHHHCSEEEEEEEECCCHH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCS
T ss_pred ccccCCCCCEEECCCCCcccccchhhcCCcCCEEECcCCcCCcCC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCC
Confidence 455667777777777777777776666778888888888888776 57777888888888888887654 677788888
Q ss_pred EEeCCCCCCCCCCccc----------ccCCCCCCEEEccCCcCCC
Q 001143 237 NLDLSNNRLTSLGSLD----------LCLMHNLQNLNLQYNKLLS 271 (1141)
Q Consensus 237 ~L~Ls~N~Lt~~~p~~----------l~~L~~L~~L~Ls~N~L~~ 271 (1141)
.|+|++|++++.+|.. +..+++|+.|| +|+++.
T Consensus 144 ~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~~ 186 (198)
T 1ds9_A 144 DLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVDV 186 (198)
T ss_dssp EEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGTT
T ss_pred EEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccCH
Confidence 8888888887776532 77788888876 677654
No 394
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.46 E-value=1.1e-15 Score=186.78 Aligned_cols=131 Identities=13% Similarity=0.083 Sum_probs=92.5
Q ss_pred CCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecC-CCCc--cCccccCCcCCcEEEccCCCCCcC-----chh
Q 001143 38 NDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKN-VLNL--IPKSVGRYEKLRNLKFFGNEINLF-----PSE 109 (1141)
Q Consensus 38 ~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N-~Lt~--iP~~l~~L~~L~~L~Ls~N~L~~l-----P~~ 109 (1141)
..+++|+.|+|++|.+++..+..+. ..+++|++|+|++| .++. ++..+.++++|++|+|++|.|+.. +.-
T Consensus 102 ~~~~~L~~L~L~~~~~~~~~~~~l~--~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~ 179 (594)
T 2p1m_B 102 SSYTWLEEIRLKRMVVTDDCLELIA--KSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHF 179 (594)
T ss_dssp HHCTTCCEEEEESCBCCHHHHHHHH--HHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGS
T ss_pred HhCCCCCeEEeeCcEEcHHHHHHHH--HhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHH
Confidence 4677899999999988876665553 12489999999988 6664 555556888999999999987632 222
Q ss_pred hcCCCCCCEEEccCCCCCCCc-----ccccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCC
Q 001143 110 VGNLLGLECLQIKISSPGVNG-----FALNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHF 174 (1141)
Q Consensus 110 ~~~L~~L~~L~Ls~N~l~~~~-----~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N 174 (1141)
...+++|+.|+|++|. ..++ ..+..+++|++|++++| .....+|..+..+++|+.|+++.+
T Consensus 180 ~~~~~~L~~L~l~~~~-~~~~~~~l~~l~~~~~~L~~L~L~~~---~~~~~l~~~~~~~~~L~~L~l~~~ 245 (594)
T 2p1m_B 180 PDTYTSLVSLNISCLA-SEVSFSALERLVTRCPNLKSLKLNRA---VPLEKLATLLQRAPQLEELGTGGY 245 (594)
T ss_dssp CTTCCCCCEEECTTCC-SCCCHHHHHHHHHHCTTCCEEECCTT---SCHHHHHHHHHHCTTCSEEECSBC
T ss_pred hhcCCcCcEEEecccC-CcCCHHHHHHHHHhCCCCcEEecCCC---CcHHHHHHHHhcCCcceEcccccc
Confidence 3467799999999887 2222 22345789999999885 233446667777777887775444
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.41 E-value=2.8e-13 Score=154.06 Aligned_cols=99 Identities=16% Similarity=0.110 Sum_probs=85.3
Q ss_pred CCCCCEEECCCCCCCCCcccch-hhhcCCCCCcEEEccCCCCCccCc-cccCCCCCC-EEEccCCcccccc-ccccCCCC
Q 001143 136 LKGLKELELSKVPPRPSVLTLL-SEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLE-QLDLSFNKMKYLP-TEICYLKA 211 (1141)
Q Consensus 136 L~~L~~L~Ls~N~ln~~~~~lp-~~l~~L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~-~L~Ls~N~L~~iP-~~l~~l~~ 211 (1141)
+++|+.|+|++|.+. .+| ..|.+|.+|+.|+|.+| ++.|+. .|.++++|+ .|+|.+ .++.|+ .+|..+++
T Consensus 225 ~~~L~~l~L~~n~i~----~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~ 298 (329)
T 3sb4_A 225 MPNLVSLDISKTNAT----TIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDN 298 (329)
T ss_dssp CTTCCEEECTTBCCC----EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTT
T ss_pred cCCCeEEECCCCCcc----eecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCcc
Confidence 789999999985543 343 47899999999999998 888866 789999999 999998 888885 67899999
Q ss_pred CCEEEccCCCCCcCCc-CccCCCCCCEEeC
Q 001143 212 LISLKVANNKLVELPS-GLYLLQRLENLDL 240 (1141)
Q Consensus 212 L~~L~Ls~N~L~~IP~-~l~~L~~L~~L~L 240 (1141)
|+.|+|++|+++.|+. .|.++++|+.|+.
T Consensus 299 L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 299 LRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp EEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 9999999999999965 6677999999874
No 396
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.39 E-value=8.7e-13 Score=150.69 Aligned_cols=130 Identities=20% Similarity=0.171 Sum_probs=107.0
Q ss_pred EEEccCC-CCCccCccccCCCCCCEEEccC-Ccccccc-ccccCCCCCCEEEccCCCCCcCC-cCccCCCCCCEEeCCCC
Q 001143 168 KLSVCHF-SIRYLPPEIGCLSNLEQLDLSF-NKMKYLP-TEICYLKALISLKVANNKLVELP-SGLYLLQRLENLDLSNN 243 (1141)
Q Consensus 168 ~L~Ls~N-~L~~iP~~l~~l~~L~~L~Ls~-N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~IP-~~l~~L~~L~~L~Ls~N 243 (1141)
.++++++ +|+.||. |..+++|+.|+|++ |+|+.+| ..|+.|++|+.|+|++|+|+.+| ..|.+|++|+.|+|++|
T Consensus 12 ~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N 90 (347)
T 2ifg_A 12 GLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFN 90 (347)
T ss_dssp CEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSS
T ss_pred EEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCC
Confidence 5788988 9999999 99999999999996 9999887 67999999999999999999775 46788999999999999
Q ss_pred CCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCCCCCCCCCCcccCcc
Q 001143 244 RLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGNGKDSSNDDFISSSA 300 (1141)
Q Consensus 244 ~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~~~~ 300 (1141)
+|+++++..|..++ |+.|+|++|+|.|.|++.+...|.. .....+..+.+.|..|
T Consensus 91 ~l~~~~~~~~~~~~-L~~l~l~~N~~~c~c~l~~~~~~~~-~~~~~l~~~~~~C~~~ 145 (347)
T 2ifg_A 91 ALESLSWKTVQGLS-LQELVLSGNPLHCSCALRWLQRWEE-EGLGGVPEQKLQCHGQ 145 (347)
T ss_dssp CCSCCCSTTTCSCC-CCEEECCSSCCCCCGGGHHHHHHHH-TTCSSCGGGCCCCSSS
T ss_pred ccceeCHHHcccCC-ceEEEeeCCCccCCCccHHHHHHHH-hCcccccccCCCCCCC
Confidence 99999997777776 9999999999999988765544433 3333333344555444
No 397
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.27 E-value=1.1e-11 Score=128.22 Aligned_cols=101 Identities=17% Similarity=0.229 Sum_probs=64.1
Q ss_pred CEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEEEccCCCCCcCchh-hcCCCCCCEEEc
Q 001143 44 SVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNLKFFGNEINLFPSE-VGNLLGLECLQI 121 (1141)
Q Consensus 44 ~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L~Ls~N~L~~lP~~-~~~L~~L~~L~L 121 (1141)
+.||+++|+|+.++. .+. ++|++|+|++|+|+.+ |..|.++++|++|+|++|+|+.+|.. |.++++|+.|+|
T Consensus 15 ~~l~~~~n~l~~iP~-~~~-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L 88 (174)
T 2r9u_A 15 TLVNCQNIRLASVPA-GIP-----TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDL 88 (174)
T ss_dssp SEEECCSSCCSSCCS-CCC-----TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred cEEEeCCCCCCccCC-CcC-----CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEEC
Confidence 566777776654332 221 5666777777777666 34566667777777777777766554 456777777777
Q ss_pred cCCCCCCCccc-ccCCCCCCEEECCCCCCC
Q 001143 122 KISSPGVNGFA-LNKLKGLKELELSKVPPR 150 (1141)
Q Consensus 122 s~N~l~~~~~~-~~~L~~L~~L~Ls~N~ln 150 (1141)
++|++..++.. |..+++|++|+|++|++.
T Consensus 89 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 89 NDNHLKSIPRGAFDNLKSLTHIYLYNNPWD 118 (174)
T ss_dssp CSSCCCCCCTTTTTTCTTCSEEECCSSCBC
T ss_pred CCCccceeCHHHhccccCCCEEEeCCCCcc
Confidence 77776666543 666777777777776554
No 398
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.26 E-value=1.5e-11 Score=126.53 Aligned_cols=104 Identities=23% Similarity=0.323 Sum_probs=75.9
Q ss_pred CCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCcc-CccccCCcCCcEEEccCCCCCcCchh-hcCCCCCCEEE
Q 001143 43 DSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLI-PKSVGRYEKLRNLKFFGNEINLFPSE-VGNLLGLECLQ 120 (1141)
Q Consensus 43 L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~i-P~~l~~L~~L~~L~Ls~N~L~~lP~~-~~~L~~L~~L~ 120 (1141)
.+.||+++|+|+.++.. + . ++|++|+|++|+|+.+ |..|.++++|++|+|++|+|+.+|.. |.++++|++|+
T Consensus 11 ~~~l~~s~n~l~~ip~~-~--~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~ 84 (170)
T 3g39_A 11 GTTVDCSGKSLASVPTG-I--P---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLS 84 (170)
T ss_dssp TTEEECTTSCCSSCCSC-C--C---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCEEEeCCCCcCccCcc-C--C---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEE
Confidence 46788888888764432 2 1 5678888888888877 44577888888888888888877654 57788888888
Q ss_pred ccCCCCCCCcc-cccCCCCCCEEECCCCCCCCC
Q 001143 121 IKISSPGVNGF-ALNKLKGLKELELSKVPPRPS 152 (1141)
Q Consensus 121 Ls~N~l~~~~~-~~~~L~~L~~L~Ls~N~ln~~ 152 (1141)
|++|+++.++. .|..+++|++|+|++|++...
T Consensus 85 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 85 LNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 88888777665 477788888888888776543
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.18 E-value=1.1e-12 Score=152.26 Aligned_cols=164 Identities=20% Similarity=0.170 Sum_probs=88.1
Q ss_pred CCcEEEccCCCCCcC-----chhhc-CCCCCCEEEccCCCCCCCc--ccccCCCCCCEEECCCCCCCCCccc-chhhh-c
Q 001143 92 KLRNLKFFGNEINLF-----PSEVG-NLLGLECLQIKISSPGVNG--FALNKLKGLKELELSKVPPRPSVLT-LLSEI-A 161 (1141)
Q Consensus 92 ~L~~L~Ls~N~L~~l-----P~~~~-~L~~L~~L~Ls~N~l~~~~--~~~~~L~~L~~L~Ls~N~ln~~~~~-lp~~l-~ 161 (1141)
.|+.|+|++|.|+.. ...+. +.++|+.|+|++|.++..+ .....+.+|+.|+|++|.+...... +...+ .
T Consensus 73 ~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~ 152 (372)
T 3un9_A 73 SLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLH 152 (372)
T ss_dssp TCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHS
T ss_pred hCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHh
Confidence 455566666655522 11121 1245555555555543322 1122334455555555443221111 11122 2
Q ss_pred CCCCCcEEEccCCCCCc-----cCccccCCCCCCEEEccCCcccc-----ccccccCCCCCCEEEccCCCCCc-----CC
Q 001143 162 GLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKVANNKLVE-----LP 226 (1141)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~-----iP~~l~~l~~L~~L~Ls~N~L~~-----iP~~l~~l~~L~~L~Ls~N~L~~-----IP 226 (1141)
..++|+.|+|++|.|+. ++..+..+++|++|+|++|.|+. |+..+...++|+.|+|++|.|+. ++
T Consensus 153 ~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~ 232 (372)
T 3un9_A 153 DQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALA 232 (372)
T ss_dssp TTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHH
T ss_pred cCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHH
Confidence 35567777777777753 33444566777777777777762 34556666777777777777762 33
Q ss_pred cCccCCCCCCEEeCCCCCCCCCCcccccC
Q 001143 227 SGLYLLQRLENLDLSNNRLTSLGSLDLCL 255 (1141)
Q Consensus 227 ~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~ 255 (1141)
..+...++|+.|+|++|.|+......+..
T Consensus 233 ~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 233 RAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 44445667777777777777555444443
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.14 E-value=3.1e-12 Score=148.53 Aligned_cols=157 Identities=20% Similarity=0.250 Sum_probs=104.5
Q ss_pred CCccEEEeecCCCCccC-cc----cc-CCcCCcEEEccCCCCCc--CchhhcCCCCCCEEEccCCCCCCCcc-cc-----
Q 001143 68 NSVEGLYLYKNVLNLIP-KS----VG-RYEKLRNLKFFGNEINL--FPSEVGNLLGLECLQIKISSPGVNGF-AL----- 133 (1141)
Q Consensus 68 ~~L~~L~Ls~N~Lt~iP-~~----l~-~L~~L~~L~Ls~N~L~~--lP~~~~~L~~L~~L~Ls~N~l~~~~~-~~----- 133 (1141)
+.|+.|+|++|.|+... .. +. ..++|+.|+|++|.|+. +..-+..+++|+.|+|++|.++..+. .+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 45667777777766322 11 22 22467777777777652 12212335567777777776654432 11
Q ss_pred cCCCCCCEEECCCCCCCCC-cccchhhhcCCCCCcEEEccCCCCCc-----cCccccCCCCCCEEEccCCcccc-----c
Q 001143 134 NKLKGLKELELSKVPPRPS-VLTLLSEIAGLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKY-----L 202 (1141)
Q Consensus 134 ~~L~~L~~L~Ls~N~ln~~-~~~lp~~l~~L~~L~~L~Ls~N~L~~-----iP~~l~~l~~L~~L~Ls~N~L~~-----i 202 (1141)
...++|++|+|++|.+... ...++..+..+++|+.|+|++|.|+. ++..+...++|+.|+|++|.|+. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 2456788888888655321 12355566788899999999999884 34566778899999999999983 4
Q ss_pred cccccCCCCCCEEEccCCCCCc
Q 001143 203 PTEICYLKALISLKVANNKLVE 224 (1141)
Q Consensus 203 P~~l~~l~~L~~L~Ls~N~L~~ 224 (1141)
+..+...++|+.|+|++|.|+.
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCH
T ss_pred HHHHHhCCCCCEEeccCCCCCH
Confidence 5566778999999999999984
No 401
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.08 E-value=1.2e-09 Score=127.17 Aligned_cols=244 Identities=12% Similarity=0.101 Sum_probs=118.6
Q ss_pred cCCCCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecC-------------
Q 001143 12 KSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKN------------- 78 (1141)
Q Consensus 12 ~~~~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N------------- 78 (1141)
+.+.. +++.+.+. ++|+.|...+|.++.+|+.++|..+ ++.+....| .++.+|+.+.+..+
T Consensus 67 F~~c~-~L~~i~lp-~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF---~~c~~L~~i~~p~~l~~i~~~aF~~~~ 140 (394)
T 4fs7_A 67 FQGCR-KVTEIKIP-STVREIGEFAFENCSKLEIINIPDS-VKMIGRCTF---SGCYALKSILLPLMLKSIGVEAFKGCD 140 (394)
T ss_dssp TTTCT-TEEEEECC-TTCCEECTTTTTTCTTCCEECCCTT-CCEECTTTT---TTCTTCCCCCCCTTCCEECTTTTTTCC
T ss_pred hhCCC-CceEEEeC-CCccCcchhHhhCCCCCcEEEeCCC-ceEccchhh---cccccchhhcccCceeeecceeeeccc
Confidence 44433 45566554 4577777777777777777777644 333322222 22344444333222
Q ss_pred --------CCCccC-ccccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCC
Q 001143 79 --------VLNLIP-KSVGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVP 148 (1141)
Q Consensus 79 --------~Lt~iP-~~l~~L~~L~~L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ 148 (1141)
.++.+. ..|.++++|+.+.|.++ +..|+. .|.++++|+.+.+..|-...-...|.++..|+.+.+..+.
T Consensus 141 ~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~~~~I~~~~F~~~~~L~~i~~~~~~ 219 (394)
T 4fs7_A 141 FKEITIPEGVTVIGDEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRNLKIIRDYCFAECILLENMEFPNSL 219 (394)
T ss_dssp CSEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCTTCCBCCCCTTC
T ss_pred ccccccCccccccchhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCCceEeCchhhccccccceeecCCCc
Confidence 111222 23556667777777644 444543 4667777777777655322223456666666665554321
Q ss_pred CC------------------CCcccchhhhcCCCCCcEEEccCCCCCccCcccc---------------------CCCCC
Q 001143 149 PR------------------PSVLTLLSEIAGLKCLTKLSVCHFSIRYLPPEIG---------------------CLSNL 189 (1141)
Q Consensus 149 ln------------------~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~~l~---------------------~l~~L 189 (1141)
.. .....-...|.++..|+.+.+..+...--...+. .+.+|
T Consensus 220 ~~i~~~~~~~~~l~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L 299 (394)
T 4fs7_A 220 YYLGDFALSKTGVKNIIIPDSFTELGKSVFYGCTDLESISIQNNKLRIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSL 299 (394)
T ss_dssp CEECTTTTTTCCCCEEEECTTCCEECSSTTTTCSSCCEEEECCTTCEECSCTTTTCTTCCEEEECSSEECTTTTTTCTTC
T ss_pred eEeehhhcccCCCceEEECCCceecccccccccccceeEEcCCCcceeeccccccccccceeccCceeeccccccccccc
Confidence 10 0000011234556666666665553321122233 34444
Q ss_pred CEEEccCCcccccc-ccccCCCCCCEEEccCCCCCcCC-cCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEcc
Q 001143 190 EQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELP-SGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQ 265 (1141)
Q Consensus 190 ~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~IP-~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls 265 (1141)
+.+.+..| ++.|+ .+|..+++|+.++|.++ ++.|+ .+|.++.+|+.++|..| ++.+....|.++.+|+.++|.
T Consensus 300 ~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 300 TEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELP 374 (394)
T ss_dssp CEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEE
T ss_pred cccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEEC
Confidence 44444332 44443 23444555555555422 44443 23344555555555444 454544455555555555554
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.06 E-value=1.9e-10 Score=131.31 Aligned_cols=104 Identities=21% Similarity=0.179 Sum_probs=89.5
Q ss_pred CEEEccCC-ccccccccccCCCCCCEEEccC-CCCCcCC-cCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccC
Q 001143 190 EQLDLSFN-KMKYLPTEICYLKALISLKVAN-NKLVELP-SGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQY 266 (1141)
Q Consensus 190 ~~L~Ls~N-~L~~iP~~l~~l~~L~~L~Ls~-N~L~~IP-~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~ 266 (1141)
..+++++| +|+.||. |..+++|+.|+|++ |+|+.+| ..|.+|++|+.|+|++|+|++++|..|..|++|+.|+|++
T Consensus 11 ~~v~~~~~n~l~~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 11 SGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp SCEECCSSCCCTTTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred CEEEcCCCCCCCccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 45789998 9999999 99999999999996 9999887 5688999999999999999999999999999999999999
Q ss_pred CcCCCCCCCchhhhhcccCCCCCCCCCCccc
Q 001143 267 NKLLSYCQVPSWICCNLEGNGKDSSNDDFIS 297 (1141)
Q Consensus 267 N~L~~~~~iP~~~~~~l~~~~l~~~~n~l~~ 297 (1141)
|+|++ +|......+.+..+.+.+|.+.|
T Consensus 90 N~l~~---~~~~~~~~~~L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALES---LSWKTVQGLSLQELVLSGNPLHC 117 (347)
T ss_dssp SCCSC---CCSTTTCSCCCCEEECCSSCCCC
T ss_pred Cccce---eCHHHcccCCceEEEeeCCCccC
Confidence 99997 77655544446666666666554
No 403
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.06 E-value=3.9e-10 Score=123.34 Aligned_cols=140 Identities=14% Similarity=0.112 Sum_probs=106.5
Q ss_pred CCCceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 883 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~~ 883 (1141)
+..|++...++.|+.+.||++...+..+++|+....... . ... +.+|+.+++.+. |..+.++++++...+
T Consensus 13 l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~-~---~~~----~~~E~~~l~~l~~~~~vP~v~~~~~~~~- 83 (263)
T 3tm0_A 13 IEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKG-T---TYD----VEREKDMMLWLEGKLPVPKVLHFERHDG- 83 (263)
T ss_dssp HTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTT-S---TTC----HHHHHHHHHHHTTTSCCCCEEEEEEETT-
T ss_pred hccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCC-C---HHH----HHHHHHHHHHHhcCCCCCeEEEEEecCC-
Confidence 456889999999999999999887788889886432111 1 112 378999999885 778889998877543
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-----------------
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS----------------- 946 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs----------------- 946 (1141)
..|+||||++|.+|.+.+. +......++.+++.+|..||+
T Consensus 84 -------------~~~lv~e~i~G~~l~~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~ 140 (263)
T 3tm0_A 84 -------------WSNLLMSEADGVLCSEEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLA 140 (263)
T ss_dssp -------------EEEEEEECCSSEEHHHHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHH
T ss_pred -------------ceEEEEEecCCeehhhccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHH
Confidence 3499999999999876521 112234778899999999998
Q ss_pred ------------------------------------------CCccccCCCCCCeeeecccccCCCCCeEEEeeccccc
Q 001143 947 ------------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 947 ------------------------------------------~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~ 983 (1141)
..++|||++|.||+++.+ ..+.|+||+.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~-------~~~~lIDwe~a~ 212 (263)
T 3tm0_A 141 ELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDG-------KVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETT-------EEEEECCCTTCE
T ss_pred HHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECC-------cEEEEEEchhcc
Confidence 458999999999999764 456799999763
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.01 E-value=1e-08 Score=119.47 Aligned_cols=247 Identities=8% Similarity=0.076 Sum_probs=154.3
Q ss_pred ccCCCCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCC---CCCCCcccccCCCCCCCccEEEeecCCCCccCc-c
Q 001143 11 QKSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKT---VDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-S 86 (1141)
Q Consensus 11 ~~~~~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~---Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~ 86 (1141)
++.+....++.+.+- +.++.|...+|.++.+|+.+.++.|. ++.+-... |.++.+|+.+.+..+ ++.|+. .
T Consensus 58 aF~~~~~~L~sI~iP-~svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~a---F~~c~~L~~i~~~~~-~~~I~~~a 132 (394)
T 4gt6_A 58 VFCNYKYVLTSVQIP-DTVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQA---FMFCSELTDIPILDS-VTEIDSEA 132 (394)
T ss_dssp TTTTCCSCCCEEEEC-TTCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTT---TTTCTTCCBCGGGTT-CSEECTTT
T ss_pred hccCCCCcCEEEEEC-CCeeEEhHHHhhCCccCceEeecCCCCCeeeEechhh---chhcccceeeccCCc-cceehhhh
Confidence 344432246666554 45999999999999999999998874 44333333 344466776666554 666654 4
Q ss_pred ccCCcCCcEEEccCCCCCcCch-hhcCCCCCCEEEccCCCCCCCc-----------------------ccccCCCCCCEE
Q 001143 87 VGRYEKLRNLKFFGNEINLFPS-EVGNLLGLECLQIKISSPGVNG-----------------------FALNKLKGLKEL 142 (1141)
Q Consensus 87 l~~L~~L~~L~Ls~N~L~~lP~-~~~~L~~L~~L~Ls~N~l~~~~-----------------------~~~~~L~~L~~L 142 (1141)
|..+.+|+.+.|.. .++.|+. .|.++.+|+.+.+..+- ..++ ..|..+.+|...
T Consensus 133 F~~c~~L~~i~lp~-~~~~I~~~~F~~c~~L~~i~~~~~~-~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c~~l~~~ 210 (394)
T 4gt6_A 133 FHHCEELDTVTIPE-GVTSVADGMFSYCYSLHTVTLPDSV-TAIEERAFTGTALTQIHIPAKVTRIGTNAFSECFALSTI 210 (394)
T ss_dssp TTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCCCSEEEECTTCCEECTTTTTTCTTCCEE
T ss_pred hhhhcccccccccc-eeeeecccceeccccccccccccee-eEeccccccccceeEEEECCcccccccchhhhcccccee
Confidence 66667777777753 3444433 35556666666654332 2222 233333444333
Q ss_pred ECCCCCCC-------------------------CCcccch--------hhhcCCCCCcEEEccCCCCCcc-CccccCCCC
Q 001143 143 ELSKVPPR-------------------------PSVLTLL--------SEIAGLKCLTKLSVCHFSIRYL-PPEIGCLSN 188 (1141)
Q Consensus 143 ~Ls~N~ln-------------------------~~~~~lp--------~~l~~L~~L~~L~Ls~N~L~~i-P~~l~~l~~ 188 (1141)
....+... ...-.+| .+|.++..|+.+.+.++.. .| ...|.++++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~aF~~c~~ 289 (394)
T 4gt6_A 211 TSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV-SIGTGAFMNCPA 289 (394)
T ss_dssp EECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC-EECTTTTTTCTT
T ss_pred cccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccc-eecCcccccccc
Confidence 32221100 0000112 3466777788887765543 34 335677888
Q ss_pred CCEEEccCCcccccc-ccccCCCCCCEEEccCCCCCcCC-cCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccC
Q 001143 189 LEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLVELP-SGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQY 266 (1141)
Q Consensus 189 L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~IP-~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~ 266 (1141)
|+.+.+. +.++.|+ ..|..+.+|+.+.|..| ++.|. .+|.++.+|+.+.|..+ ++.+....|.++.+|+.+++.+
T Consensus 290 L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~ 366 (394)
T 4gt6_A 290 LQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSG 366 (394)
T ss_dssp CCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESS
T ss_pred cccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECC
Confidence 8888885 5677776 45777888999988754 77775 45666888999988654 7888888888899999998888
Q ss_pred Cc
Q 001143 267 NK 268 (1141)
Q Consensus 267 N~ 268 (1141)
|.
T Consensus 367 ~~ 368 (394)
T 4gt6_A 367 SR 368 (394)
T ss_dssp CH
T ss_pred ce
Confidence 74
No 405
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=98.89 E-value=1.1e-08 Score=118.97 Aligned_cols=137 Identities=10% Similarity=0.016 Sum_probs=93.4
Q ss_pred CccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCC----
Q 001143 28 KINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNE---- 102 (1141)
Q Consensus 28 ~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~---- 102 (1141)
+++.|...+|.++.+|+.++|.. .++.+-... |.++++|+.++|.+| ++.|+. .|.++.+|+.+.+..+-
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~a---F~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l~~i~ 132 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPS-TVREIGEFA---FENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLMLKSIG 132 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCT-TCCEECTTT---TTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTCCEEC
T ss_pred eEeEhHHHHhhCCCCceEEEeCC-CccCcchhH---hhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCceeeec
Confidence 58999999999999999999975 477655544 456699999999876 888875 58888888887776441
Q ss_pred -----------------CCcC-chhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCCCCcccchhhhcCCC
Q 001143 103 -----------------INLF-PSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIAGLK 164 (1141)
Q Consensus 103 -----------------L~~l-P~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~ 164 (1141)
+..+ ...|.++++|+.+.+..+....-...|.++.+|+.+.+..+ ....-...|.++.
T Consensus 133 ~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~I~~~~F~~c~~L~~i~l~~~----~~~I~~~~F~~~~ 208 (394)
T 4fs7_A 133 VEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMETLHNGLFSGCGKLKSIKLPRN----LKIIRDYCFAECI 208 (394)
T ss_dssp TTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCBCCCCTT----CCEECTTTTTTCT
T ss_pred ceeeecccccccccCccccccchhhhcccCCCcEEecCCccceeccccccCCCCceEEEcCCC----ceEeCchhhcccc
Confidence 1112 12366777888888875554444456777888888877652 2212223455666
Q ss_pred CCcEEEccC
Q 001143 165 CLTKLSVCH 173 (1141)
Q Consensus 165 ~L~~L~Ls~ 173 (1141)
.|+.+.+..
T Consensus 209 ~L~~i~~~~ 217 (394)
T 4fs7_A 209 LLENMEFPN 217 (394)
T ss_dssp TCCBCCCCT
T ss_pred ccceeecCC
Confidence 666555543
No 406
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.87 E-value=4.4e-08 Score=113.08 Aligned_cols=239 Identities=13% Similarity=0.058 Sum_probs=141.0
Q ss_pred CcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccCCcCCcEEE
Q 001143 18 IKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGRYEKLRNLK 97 (1141)
Q Consensus 18 ~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~L~~L~~L~ 97 (1141)
+++++.+. ..|+.|...+|.++.+|+.++|..+ ++.+-...|. ++ +|+.+.+..| ++.|+.......+|+.+.
T Consensus 47 ~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~---~c-~l~~i~~~~~-l~~I~~~aF~~~~L~~i~ 119 (379)
T 4h09_A 47 RISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFA---DT-KLQSYTGMER-VKKFGDYVFQGTDLDDFE 119 (379)
T ss_dssp GCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTT---TC-CCCEEEECTT-CCEECTTTTTTCCCSEEE
T ss_pred CCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceEechhhhc---CC-CCceEECCce-eeEeccceeccCCccccc
Confidence 45555543 4689999999999999999999754 7655555554 33 6888888765 888876543445899999
Q ss_pred ccCCCCCcCchhhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCCC---------------------------
Q 001143 98 FFGNEINLFPSEVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPPR--------------------------- 150 (1141)
Q Consensus 98 Ls~N~L~~lP~~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~ln--------------------------- 150 (1141)
|.++ ++.+......-.+|+.+.+..+-...-...|..+.+|+.+.+..+...
T Consensus 120 lp~~-~~~i~~~~F~~~~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (379)
T 4h09_A 120 FPGA-TTEIGNYIFYNSSVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTE 198 (379)
T ss_dssp CCTT-CCEECTTTTTTCCCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSE
T ss_pred CCCc-cccccccccccceeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceeccccccccccc
Confidence 8764 444444322233555555543332222234555555555544432210
Q ss_pred -----CCcccchhhhcCCCCCcEEEccCCCCCccC-ccccCCCCCCEEEccCCcccccc-ccccCCCCCCEEEccCCCCC
Q 001143 151 -----PSVLTLLSEIAGLKCLTKLSVCHFSIRYLP-PEIGCLSNLEQLDLSFNKMKYLP-TEICYLKALISLKVANNKLV 223 (1141)
Q Consensus 151 -----~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~~L~~L~Ls~N~L~ 223 (1141)
.........+..+..|+.+.+..+ +..++ ..+..+.+|+.+.+..+ ++.|. ..+..+.+|+.+.+.. .++
T Consensus 199 ~~~~~~~~~i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~ 275 (379)
T 4h09_A 199 FTIPSTVKTVTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVK 275 (379)
T ss_dssp EECCTTCCEECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCS
T ss_pred cccccceeEEeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cce
Confidence 001111123444555666665443 33343 24566667777777654 55553 3455666777777753 366
Q ss_pred cCCc-CccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCC
Q 001143 224 ELPS-GLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1141)
Q Consensus 224 ~IP~-~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N 267 (1141)
.|+. .+.++.+|+.+.|.+|.++.+....|.++.+|+.+.|..|
T Consensus 276 ~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~ 320 (379)
T 4h09_A 276 TVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA 320 (379)
T ss_dssp EECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT
T ss_pred eccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc
Confidence 6643 3445677777777777777666667777777777777544
No 407
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.84 E-value=1.4e-09 Score=125.75 Aligned_cols=153 Identities=17% Similarity=0.179 Sum_probs=81.0
Q ss_pred hhhcCCCCCCEEEccCCC-CCCCcccccCCCCCCEEECCCCCCCCCcccchhhhc--CCCCCcEEEccC--CC------C
Q 001143 108 SEVGNLLGLECLQIKISS-PGVNGFALNKLKGLKELELSKVPPRPSVLTLLSEIA--GLKCLTKLSVCH--FS------I 176 (1141)
Q Consensus 108 ~~~~~L~~L~~L~Ls~N~-l~~~~~~~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~--~L~~L~~L~Ls~--N~------L 176 (1141)
..+..+++|+.|+|++|. +.. +. + .+++|+.|+|..+.++ ......++ .+++|+.|+|+. |. +
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l~l-~~-~-~~~~L~~L~L~~~~l~---~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~ 239 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNLSI-GK-K-PRPNLKSLEIISGGLP---DSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDM 239 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTCBC-CS-C-BCTTCSEEEEECSBCC---HHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCG
T ss_pred HHHhcCCCCcEEEEeCCCCcee-cc-c-cCCCCcEEEEecCCCC---hHHHHHHHHccCCCCcEEEEeccccccccchhH
Confidence 334555566666665552 221 11 2 2556666666553321 12122232 466666666542 11 1
Q ss_pred CccCccc--cCCCCCCEEEccCCccc-cccccc---cCCCCCCEEEccCCCCCc-----CCcCccCCCCCCEEeCCCCCC
Q 001143 177 RYLPPEI--GCLSNLEQLDLSFNKMK-YLPTEI---CYLKALISLKVANNKLVE-----LPSGLYLLQRLENLDLSNNRL 245 (1141)
Q Consensus 177 ~~iP~~l--~~l~~L~~L~Ls~N~L~-~iP~~l---~~l~~L~~L~Ls~N~L~~-----IP~~l~~L~~L~~L~Ls~N~L 245 (1141)
..+...+ ..+++|+.|+|.+|.+. ..+..+ ..+++|+.|+|+.|.|+. |+..+.++++|+.|+|++|.|
T Consensus 240 ~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i 319 (362)
T 2ra8_A 240 NVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYL 319 (362)
T ss_dssp GGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBC
T ss_pred HHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcC
Confidence 1121112 24677888888777776 222222 246778888888877763 455555677778888877777
Q ss_pred CCCCcccccC-CCCCCEEEccCCc
Q 001143 246 TSLGSLDLCL-MHNLQNLNLQYNK 268 (1141)
Q Consensus 246 t~~~p~~l~~-L~~L~~L~Ls~N~ 268 (1141)
+...-..+.. + ...+++++|+
T Consensus 320 ~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 320 SDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp CHHHHHHHHHHC--CSEEECCSBC
T ss_pred CHHHHHHHHHHc--CCEEEecCCc
Confidence 6433222332 2 3456777665
No 408
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.80 E-value=1.7e-07 Score=109.07 Aligned_cols=232 Identities=10% Similarity=0.120 Sum_probs=150.4
Q ss_pred CccccCCCCCCCCC-CCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC---CCccCc-cccCCcCCcEEEccCCC
Q 001143 28 KINNEKNGSVNDDD-DDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV---LNLIPK-SVGRYEKLRNLKFFGNE 102 (1141)
Q Consensus 28 ~i~~i~~~~f~~l~-~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~---Lt~iP~-~l~~L~~L~~L~Ls~N~ 102 (1141)
.++.|...+|.+.. .|+.+.|-.+ ++.+-...| .++++|+.+.+..|. ++.|+. +|.++.+|+.+.+.++
T Consensus 50 ~Vt~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF---~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~- 124 (394)
T 4gt6_A 50 PVSKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAF---YNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS- 124 (394)
T ss_dssp EEEEECTTTTTTCCSCCCEEEECTT-CCEECTTTT---TTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-
T ss_pred eeeEcCHhhccCCCCcCEEEEECCC-eeEEhHHHh---hCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-
Confidence 48899999999985 6999999764 766555544 566999999998874 778865 6888999999988765
Q ss_pred CCcCch-hhcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCCCCC---------CCC-cccch--------hhhcCC
Q 001143 103 INLFPS-EVGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSKVPP---------RPS-VLTLL--------SEIAGL 163 (1141)
Q Consensus 103 L~~lP~-~~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~N~l---------n~~-~~~lp--------~~l~~L 163 (1141)
++.|+. .|.++.+|+.+.+..+....-...|..+.+|+.+.+..+-- +.+ .-.+| ..|..+
T Consensus 125 ~~~I~~~aF~~c~~L~~i~lp~~~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~~~~l~~i~ip~~~~~i~~~af~~c 204 (394)
T 4gt6_A 125 VTEIDSEAFHHCEELDTVTIPEGVTSVADGMFSYCYSLHTVTLPDSVTAIEERAFTGTALTQIHIPAKVTRIGTNAFSEC 204 (394)
T ss_dssp CSEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCTTCCEEECCTTCCEECTTTTTTCCCSEEEECTTCCEECTTTTTTC
T ss_pred cceehhhhhhhhcccccccccceeeeecccceecccccccccccceeeEeccccccccceeEEEECCcccccccchhhhc
Confidence 777755 48899999999997655444446788899999998865310 000 00111 123344
Q ss_pred CCCcEEEccCCCCC-----------------------------ccCc--------cccCCCCCCEEEccCCccccc-ccc
Q 001143 164 KCLTKLSVCHFSIR-----------------------------YLPP--------EIGCLSNLEQLDLSFNKMKYL-PTE 205 (1141)
Q Consensus 164 ~~L~~L~Ls~N~L~-----------------------------~iP~--------~l~~l~~L~~L~Ls~N~L~~i-P~~ 205 (1141)
..|..+....+... .+|. .|..+.+|+.+.+..+.. .| ...
T Consensus 205 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~~~a 283 (394)
T 4gt6_A 205 FALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPNGVARIETHAFDSCAYLASVKMPDSVV-SIGTGA 283 (394)
T ss_dssp TTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCTTEEEECTTTTTTCSSCCEEECCTTCC-EECTTT
T ss_pred cccceecccccccccccceeecccccccccccccccccccceEEcCCcceEcccceeeecccccEEecccccc-eecCcc
Confidence 44443332222111 1121 244555666666654433 33 244
Q ss_pred ccCCCCCCEEEccCCCCCcCCcC-ccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCC
Q 001143 206 ICYLKALISLKVANNKLVELPSG-LYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1141)
Q Consensus 206 l~~l~~L~~L~Ls~N~L~~IP~~-l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N 267 (1141)
|.++++|+.+.+. +.++.|+.. |.++.+|+.++|..| ++.+....|.++.+|+.+.|..|
T Consensus 284 F~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s 344 (394)
T 4gt6_A 284 FMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS 344 (394)
T ss_dssp TTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT
T ss_pred cccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc
Confidence 6667777777774 556666543 445777777777654 66666667777777777777544
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.75 E-value=8.9e-09 Score=111.49 Aligned_cols=134 Identities=14% Similarity=0.114 Sum_probs=91.6
Q ss_pred CCCceEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCC--ccceeeeEecC
Q 001143 805 FPSLSSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC--IVEMYGHKISS 881 (1141)
Q Consensus 805 ~~~y~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpN--IVkllg~~~~~ 881 (1141)
+..|.+....+.|..+.||++... +..+++|+.... .... +.+|+.+++.+.+.+ +.+++++....
T Consensus 19 ~~~~~~~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~-------~~~~----~~~E~~~l~~l~~~~~~vP~~~~~~~~~ 87 (264)
T 1nd4_A 19 LFGYDWAQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG-------ALNE----LQDEAARLSWLATTGVPCAAVLDVVTEA 87 (264)
T ss_dssp TTTCEEEECSCTTSSCEEEEEECTTSCCEEEEEECSC-------TTSC----HHHHHHHHHHHHTTTCCBCCEEEEEECS
T ss_pred cCCCceEecccCCCCceEEEEecCCCCeEEEEeCCcc-------cchh----hhHHHHHHHHHHhCCCCCCeEEEeccCC
Confidence 445666555556777999999764 456888885321 1112 368999998885434 56688876643
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-------------
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH------------- 948 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g------------- 948 (1141)
+ ..++||||++|.+|. .. ..+ ...++.+++..|..||+..
T Consensus 88 ~--------------~~~~v~e~i~G~~l~--~~--------~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~ 140 (264)
T 1nd4_A 88 G--------------RDWLLLGEVPGQDLL--SS--------HLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHR 140 (264)
T ss_dssp S--------------CEEEEEECCSSEETT--TS--------CCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHH
T ss_pred C--------------CCEEEEEecCCcccC--cC--------cCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHH
Confidence 3 249999999998873 11 111 1245666777777777643
Q ss_pred ---------------------------------------------ccccCCCCCCeeeecccccCCCCCeEEEeeccccc
Q 001143 949 ---------------------------------------------IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 949 ---------------------------------------------IvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~ 983 (1141)
++|||++|.||+++.+ ..+.|+|||.+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~-------~~~~liD~~~a~ 213 (264)
T 1nd4_A 141 IERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENG-------RFSGFIDCGRLG 213 (264)
T ss_dssp HHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETT-------EEEEECCCTTCE
T ss_pred HHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECC-------cEEEEEcchhcc
Confidence 9999999999999765 456799999873
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.75 E-value=1.3e-08 Score=116.76 Aligned_cols=148 Identities=15% Similarity=0.179 Sum_probs=103.9
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC--CCCccceeeeEecCCCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR--HSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~--HpNIVkllg~~~~~~~~~~ 886 (1141)
.-.+.|+.|.++.||++...+..+++|+..... ........ .+.+|+.+++.+. +..+++++.++.+....
T Consensus 41 ~~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~-~~~~~~~~----~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~-- 113 (359)
T 3dxp_A 41 LSVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPK-SKLLPSAH----AIEREYRVMDALAGTDVPVAKMYALCEDESVI-- 113 (359)
T ss_dssp CEEEECCC-CCSCEEEEECSSCEEEEECCCC---------------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTT--
T ss_pred ceEEEcCCcccceEEEEEECCceEEEEeCCCCC-CCCCCcHH----HHHHHHHHHHHhhcCCCCCCcEEEECCCCCcc--
Confidence 346789999999999998877777777542001 00011112 2378999999986 55688888887654211
Q ss_pred CCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH--------------------
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-------------------- 946 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-------------------- 946 (1141)
...++||||++|..+.+.. ...++..+...++.+++.+|..||+
T Consensus 114 ---------g~~~~vme~v~G~~l~~~~-------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~ 177 (359)
T 3dxp_A 114 ---------GRAFYIMEFVSGRVLWDQS-------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQR 177 (359)
T ss_dssp ---------SSCEEEEECCCCBCCCCTT-------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHH
T ss_pred ---------CCeEEEEEecCCeecCCCc-------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHH
Confidence 1348999999987764311 1247788889999999999999997
Q ss_pred --------------------------------------CCccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 947 --------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 947 --------------------------------------~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
.+++|||+++.|||++.+.. ..+.|+||+.+..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~-----~v~~viDwe~a~~ 248 (359)
T 3dxp_A 178 QIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEP-----RVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSS-----CEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCC-----cEEEEECcccccc
Confidence 36899999999999987521 2468999999864
No 411
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.62 E-value=2.2e-08 Score=112.31 Aligned_cols=197 Identities=18% Similarity=0.211 Sum_probs=118.8
Q ss_pred eeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCC--ccceeeeEecCCCCCCCC
Q 001143 812 DEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSC--IVEMYGHKISSKWLPSAD 888 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpN--IVkllg~~~~~~~~~~~~ 888 (1141)
+.++.|.+..||++. ..+++|+... ..... .+.+|+++++.+. +.. +.+++.......
T Consensus 26 ~~~~~G~~n~v~~v~---~~~vlR~~~~------~~~~~----~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~------ 86 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN---RDFIFKFPKH------SRGST----NLFNEVNILKRIHNKLPLPIPEVVFTGMPSE------ 86 (304)
T ss_dssp CEEEECSSEEEEEST---TSEEEEEESS------HHHHH----HHHHHHHHHHHHTTSSSSCCCCEEEECCCCS------
T ss_pred EecCCCCcceEEEEC---CEEEEEecCC------cchHH----HHHHHHHHHHHHHhcCCCCCCceEeecCCCC------
Confidence 458999999999864 5677887431 12222 3478999998884 433 344444332211
Q ss_pred CCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------
Q 001143 889 GNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS---------------------- 946 (1141)
Q Consensus 889 g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs---------------------- 946 (1141)
.....|+|||+++|.+|...... .++..+...++.|++..|..||+
T Consensus 87 -----~~~~~~~vm~~i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~ 154 (304)
T 3sg8_A 87 -----TYQMSFAGFTKIKGVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDN 154 (304)
T ss_dssp -----SCSCSCEEEECCCCEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHH
T ss_pred -----CCCcceEEEcccCCeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHH
Confidence 11233899999999888654332 37778888888888888888886
Q ss_pred ------------------------------------CCccccCCCCCCeeeecccccCCCCCeEEEeecccccccccccc
Q 001143 947 ------------------------------------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLRSFLH 990 (1141)
Q Consensus 947 ------------------------------------~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~~~~~ 990 (1141)
..++|+|++|.||+++.+. ...+.|+||+.+..-.....
T Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~-----~~~~~~iD~~~~~~~~~~~D 229 (304)
T 3sg8_A 155 KKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEK-----NTICGIIDFGDAAISDPDND 229 (304)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTT-----TEEEEECCCTTCEEECTTHH
T ss_pred HHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCC-----CCEEEEEeCCCCccCChHHH
Confidence 1379999999999998731 15688999998864322110
Q ss_pred ccccccC-CCCCC---CCccCCCcccc-hhhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCC
Q 001143 991 TCCIAHR-GIPAP---DVCVGTPRWMA-PEVLRAMHKPNLYGLEVDIWSYGCLLLELLTLQVPYM 1050 (1141)
Q Consensus 991 ~~~~~~~-~~~~~---~~~~GT~~Y~A-PE~l~~~~~~~~~s~ksDVWSLGviL~ELLTGk~Pf~ 1050 (1141)
....... ....+ ........+.. |+.... .....+.|++|.++|.+.+|..+|.
T Consensus 230 l~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r------~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 230 FISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEK------YRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHH------HHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHH------HHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 0000000 00000 00000001112 333221 1134689999999999999987763
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.62 E-value=2.3e-08 Score=115.48 Aligned_cols=81 Identities=20% Similarity=0.228 Sum_probs=57.4
Q ss_pred CCCCCcEEEccCCCCCc-cCccc---cCCCCCCEEEccCCcccc-----ccccccCCCCCCEEEccCCCCCc-CCcCccC
Q 001143 162 GLKCLTKLSVCHFSIRY-LPPEI---GCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKVANNKLVE-LPSGLYL 231 (1141)
Q Consensus 162 ~L~~L~~L~Ls~N~L~~-iP~~l---~~l~~L~~L~Ls~N~L~~-----iP~~l~~l~~L~~L~Ls~N~L~~-IP~~l~~ 231 (1141)
.+++|+.|+|.+|.++. .+..+ ..+++|+.|+|+.|.|+. ++..+..+++|+.|+|++|.|+. .-..+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~ 329 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQK 329 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHH
Confidence 46788999998888872 22222 357889999999999883 45556678899999999998872 1122222
Q ss_pred -CCCCCEEeCCCCC
Q 001143 232 -LQRLENLDLSNNR 244 (1141)
Q Consensus 232 -L~~L~~L~Ls~N~ 244 (1141)
+ ...++++.|+
T Consensus 330 al--g~~~~~~~~~ 341 (362)
T 2ra8_A 330 SL--PMKIDVSDSQ 341 (362)
T ss_dssp HC--CSEEECCSBC
T ss_pred Hc--CCEEEecCCc
Confidence 2 3668999887
No 413
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.48 E-value=3.1e-06 Score=97.47 Aligned_cols=241 Identities=11% Similarity=0.093 Sum_probs=161.9
Q ss_pred cccCCCCCCcccccCCCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCCCCccCccccC
Q 001143 10 TQKSPEGPIKEKLPSEANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNVLNLIPKSVGR 89 (1141)
Q Consensus 10 ~~~~~~~~~l~~L~~~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~~l~~ 89 (1141)
.++.+.. +|+.+.+. ++++.|...+|.+. +|+.+.+..+ ++.+....|. + .+|+.+.|..+ ++.+......
T Consensus 63 ~aF~~C~-~L~~I~lp-~~v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~---~-~~L~~i~lp~~-~~~i~~~~F~ 133 (379)
T 4h09_A 63 ANFNSCY-NMTKVTVA-STVTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQ---G-TDLDDFEFPGA-TTEIGNYIFY 133 (379)
T ss_dssp TTTTTCT-TCCEEEEC-TTCCEECTTTTTTC-CCCEEEECTT-CCEECTTTTT---T-CCCSEEECCTT-CCEECTTTTT
T ss_pred HHhhCCC-CCCEEEeC-CcceEechhhhcCC-CCceEECCce-eeEeccceec---c-CCcccccCCCc-cccccccccc
Confidence 3445544 67777775 45889999999987 6777777644 5444333332 2 36888888665 5555443222
Q ss_pred CcCCcEEEccCCCCCcC-chhhcCCCCCCEEEccC------------------------------------CCCCCCccc
Q 001143 90 YEKLRNLKFFGNEINLF-PSEVGNLLGLECLQIKI------------------------------------SSPGVNGFA 132 (1141)
Q Consensus 90 L~~L~~L~Ls~N~L~~l-P~~~~~L~~L~~L~Ls~------------------------------------N~l~~~~~~ 132 (1141)
-.+|+.+.+..+ ++.+ ...|.++.+|+.+.+.. +........
T Consensus 134 ~~~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 212 (379)
T 4h09_A 134 NSSVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKTVTAYG 212 (379)
T ss_dssp TCCCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCEECTTT
T ss_pred cceeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceeccccccccccccccccceeEEeecc
Confidence 234555554432 3333 22344455555444332 222222335
Q ss_pred ccCCCCCCEEECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccCc-cccCCCCCCEEEccCCcccccc-ccccCCC
Q 001143 133 LNKLKGLKELELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLPP-EIGCLSNLEQLDLSFNKMKYLP-TEICYLK 210 (1141)
Q Consensus 133 ~~~L~~L~~L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP~-~l~~l~~L~~L~Ls~N~L~~iP-~~l~~l~ 210 (1141)
+....+|+.+.+.. +....-...|.++..|+.+.+..+ ++.|.. .+.++.+|+.+.+.. .++.++ ..|..++
T Consensus 213 f~~~~~l~~i~~~~----~~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~-~i~~i~~~aF~~c~ 286 (379)
T 4h09_A 213 FSYGKNLKKITITS----GVTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYA-KVKTVPYLLCSGCS 286 (379)
T ss_dssp TTTCSSCSEEECCT----TCCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECC-CCSEECTTTTTTCT
T ss_pred cccccccceeeecc----ceeEEccccccCCccceEEEcCCC-ccEeCccccceeehhccccccc-cceecccccccccc
Confidence 66677888888865 233333456788999999999776 777754 678889999999965 477776 4578899
Q ss_pred CCCEEEccCCCCCcCC-cCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCC
Q 001143 211 ALISLKVANNKLVELP-SGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYN 267 (1141)
Q Consensus 211 ~L~~L~Ls~N~L~~IP-~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N 267 (1141)
+|+.+.+.+|.++.|+ ..|.++.+|+.+.|..| ++.+....|.++.+|+.+.+..|
T Consensus 287 ~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 287 NLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred ccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 9999999999999996 45667999999999765 88888888999999999988655
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=1.1e-07 Score=98.96 Aligned_cols=115 Identities=14% Similarity=0.069 Sum_probs=81.7
Q ss_pred chhhhcCCCCCcEEEccCC-CCCc-----cCccccCCCCCCEEEccCCccc-----cccccccCCCCCCEEEccCCCCCc
Q 001143 156 LLSEIAGLKCLTKLSVCHF-SIRY-----LPPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLVE 224 (1141)
Q Consensus 156 lp~~l~~L~~L~~L~Ls~N-~L~~-----iP~~l~~l~~L~~L~Ls~N~L~-----~iP~~l~~l~~L~~L~Ls~N~L~~ 224 (1141)
+...+...+.|+.|+|++| .|+. +...+...++|++|+|++|.|+ .|...+...++|++|+|++|.|+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~ 107 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISG 107 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCH
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCH
Confidence 3445666777888888888 7762 3344566678888888888886 244556666788888888888872
Q ss_pred -----CCcCccCCCCCCEEeC--CCCCCCCCCc----ccccCCCCCCEEEccCCcCC
Q 001143 225 -----LPSGLYLLQRLENLDL--SNNRLTSLGS----LDLCLMHNLQNLNLQYNKLL 270 (1141)
Q Consensus 225 -----IP~~l~~L~~L~~L~L--s~N~Lt~~~p----~~l~~L~~L~~L~Ls~N~L~ 270 (1141)
|...+...++|+.|+| ++|.|+.... ..+...++|+.|+|++|.+.
T Consensus 108 ~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 108 SGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 4666777778888888 7788875432 23445578888888888764
No 415
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.32 E-value=3e-06 Score=95.73 Aligned_cols=131 Identities=21% Similarity=0.208 Sum_probs=93.9
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCC----CCccceeeeEecCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRH----SCIVEMYGHKISSKWL 884 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~H----pNIVkllg~~~~~~~~ 884 (1141)
...+.++.|....||++ +..+++|+.. ....... +.+|.+++..+.+ ..+.+++++ +
T Consensus 40 ~~v~~l~~G~~n~vy~v---g~~~vlR~~~------~~~~~~~----~~~E~~~L~~L~~~~~~~~vP~v~~~----~-- 100 (320)
T 3r70_A 40 NELRYLSSGDDSDTFLC---NEQYVVKVPK------RDSVRIS----QKRELELYRFLENCKLSYQIPAVVYQ----S-- 100 (320)
T ss_dssp SCEEEEEECSSEEEEEE---TTTEEEEEES------SHHHHHH----HHHHHHHHHHHTTSCCSSBCCCEEEE----C--
T ss_pred EEEEeCCCCCCceEEEE---CCEEEEEeCC------cHHHHHH----HHHHHHHHHHHHhcCCCCCcceEEec----C--
Confidence 45678899999999998 6778888742 1121222 3789999888865 223455444 1
Q ss_pred CCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC----------------
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSKH---------------- 948 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~g---------------- 948 (1141)
..++||||++|.++...... .++..+...++.+++..|..||+..
T Consensus 101 ------------~~~lvme~i~G~~l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~ 161 (320)
T 3r70_A 101 ------------DRFNIMKYIKGERITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKK 161 (320)
T ss_dssp ------------SSCEEEECCCCBCCCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHH
T ss_pred ------------CcEEEEeecCCccccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccch
Confidence 12899999999888643321 3677777788888888888888432
Q ss_pred -----------------------------------------------ccccCCCCCCeeeecccccCCCCCeEEEeeccc
Q 001143 949 -----------------------------------------------IMHRDIKSENILIDLERKKADGKPVVKLCDFDR 981 (1141)
Q Consensus 949 -----------------------------------------------IvHrDLKP~NILld~~~~~~~~~~~vKL~DFGl 981 (1141)
++|+|++|.||+++.+ ..+.|+||+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~-------~~~~~iD~~~ 234 (320)
T 3r70_A 162 DKFLQDKKLLISILEKEQLLTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNN-------RLFGVIDFGD 234 (320)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETT-------EEEEECCCTT
T ss_pred HHHHHHHHHHHHHHhhcccccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECC-------ceEEEECCcc
Confidence 3999999999999875 4579999999
Q ss_pred ccc
Q 001143 982 AVP 984 (1141)
Q Consensus 982 A~~ 984 (1141)
+..
T Consensus 235 ~~~ 237 (320)
T 3r70_A 235 FNV 237 (320)
T ss_dssp CEE
T ss_pred ccc
Confidence 854
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.32 E-value=9.2e-08 Score=105.60 Aligned_cols=78 Identities=24% Similarity=0.203 Sum_probs=39.1
Q ss_pred CCCCCCEEEccCCccccc---cccccCCCCCCEEEccCCCCCcCCcCccCCC--CCCEEeCCCCCCCCCCc-------cc
Q 001143 185 CLSNLEQLDLSFNKMKYL---PTEICYLKALISLKVANNKLVELPSGLYLLQ--RLENLDLSNNRLTSLGS-------LD 252 (1141)
Q Consensus 185 ~l~~L~~L~Ls~N~L~~i---P~~l~~l~~L~~L~Ls~N~L~~IP~~l~~L~--~L~~L~Ls~N~Lt~~~p-------~~ 252 (1141)
++++|+.|+|++|+|+.+ |..+..+++|+.|+|++|+|+.+ ..+..+. +|+.|+|++|.|++..| ..
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~~i 246 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSLCDTFRDQSTYISAI 246 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHHHH
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcCccccCcchhHHHHH
Confidence 455555555555555533 23444555555555555555544 2233333 55556666665554332 12
Q ss_pred ccCCCCCCEEE
Q 001143 253 LCLMHNLQNLN 263 (1141)
Q Consensus 253 l~~L~~L~~L~ 263 (1141)
+..+++|+.||
T Consensus 247 l~~~P~L~~LD 257 (267)
T 3rw6_A 247 RERFPKLLRLD 257 (267)
T ss_dssp HHHCTTCCEES
T ss_pred HHHCcccCeEC
Confidence 44555555544
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.20 E-value=4.6e-07 Score=94.33 Aligned_cols=89 Identities=15% Similarity=0.114 Sum_probs=56.1
Q ss_pred hhhcCCCCCcEEEccCCCCCc-----cCccccCCCCCCEEEccCCcccc-----ccccccCCCCCCEEEc--cCCCCCc-
Q 001143 158 SEIAGLKCLTKLSVCHFSIRY-----LPPEIGCLSNLEQLDLSFNKMKY-----LPTEICYLKALISLKV--ANNKLVE- 224 (1141)
Q Consensus 158 ~~l~~L~~L~~L~Ls~N~L~~-----iP~~l~~l~~L~~L~Ls~N~L~~-----iP~~l~~l~~L~~L~L--s~N~L~~- 224 (1141)
..+...++|++|+|++|.|+. +...+...++|++|+|++|.|+. |...+...++|+.|+| ++|.|+.
T Consensus 59 ~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~ 138 (185)
T 1io0_A 59 EALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNN 138 (185)
T ss_dssp HHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHH
T ss_pred HHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHH
Confidence 345555666777777776652 23334445667777777777762 4556666677777777 6677762
Q ss_pred ----CCcCccCCCCCCEEeCCCCCCC
Q 001143 225 ----LPSGLYLLQRLENLDLSNNRLT 246 (1141)
Q Consensus 225 ----IP~~l~~L~~L~~L~Ls~N~Lt 246 (1141)
|...+...++|+.|+|++|.+.
T Consensus 139 g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 139 VEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 3444555567777777777664
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.18 E-value=2.7e-07 Score=101.93 Aligned_cols=97 Identities=22% Similarity=0.142 Sum_probs=68.2
Q ss_pred EECCCCCCCCCcccchhhhcCCCCCcEEEccCCCCCccC---ccccCCCCCCEEEccCCccccccccccCCC--CCCEEE
Q 001143 142 LELSKVPPRPSVLTLLSEIAGLKCLTKLSVCHFSIRYLP---PEIGCLSNLEQLDLSFNKMKYLPTEICYLK--ALISLK 216 (1141)
Q Consensus 142 L~Ls~N~ln~~~~~lp~~l~~L~~L~~L~Ls~N~L~~iP---~~l~~l~~L~~L~Ls~N~L~~iP~~l~~l~--~L~~L~ 216 (1141)
++++.|..+.+...++-...++++|+.|+|++|+|+.++ ..+..+++|+.|+|++|+|+.+ ..+..++ +|+.|+
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~ 226 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELW 226 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEE
Confidence 455554333232223323356888999999999998653 4557889999999999999976 3444444 899999
Q ss_pred ccCCCCC-cCCc-------CccCCCCCCEEe
Q 001143 217 VANNKLV-ELPS-------GLYLLQRLENLD 239 (1141)
Q Consensus 217 Ls~N~L~-~IP~-------~l~~L~~L~~L~ 239 (1141)
|++|.|. .+|. .+..+++|+.||
T Consensus 227 L~~Npl~~~~~~~~~y~~~il~~~P~L~~LD 257 (267)
T 3rw6_A 227 LDGNSLCDTFRDQSTYISAIRERFPKLLRLD 257 (267)
T ss_dssp CTTSTTGGGCSSHHHHHHHHHHHCTTCCEES
T ss_pred ccCCcCccccCcchhHHHHHHHHCcccCeEC
Confidence 9999997 5652 255688888875
No 419
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=98.16 E-value=2.8e-06 Score=83.48 Aligned_cols=72 Identities=19% Similarity=0.166 Sum_probs=62.3
Q ss_pred CEEEccCCCCC--cCCcCccCCCCCCEEeCCCCCCCCCCcccccCCCCCCEEEccCCcCCCCCCCchhhhhcccCC
Q 001143 213 ISLKVANNKLV--ELPSGLYLLQRLENLDLSNNRLTSLGSLDLCLMHNLQNLNLQYNKLLSYCQVPSWICCNLEGN 286 (1141)
Q Consensus 213 ~~L~Ls~N~L~--~IP~~l~~L~~L~~L~Ls~N~Lt~~~p~~l~~L~~L~~L~Ls~N~L~~~~~iP~~~~~~l~~~ 286 (1141)
..++.+++.|+ .||..+. .+|+.|+|++|+|+.+++..|..+++|+.|+|++|+|.|.|.+-+...|.....
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~CdC~l~~l~~wl~~~~ 84 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWRCDCRLVPLRAWLAGRP 84 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCBCSGGGHHHHHHHHTSS
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCeeccCccHHHHHHHHhCc
Confidence 47888999998 8887655 569999999999999999999999999999999999999999877777665543
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.03 E-value=3.4e-05 Score=86.58 Aligned_cols=138 Identities=16% Similarity=0.141 Sum_probs=87.7
Q ss_pred eeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCC---CccceeeeEecCCCCCCC
Q 001143 811 CDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS---CIVEMYGHKISSKWLPSA 887 (1141)
Q Consensus 811 ~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp---NIVkllg~~~~~~~~~~~ 887 (1141)
.+.++.|....||+. +..+++|+.. ...... .+.+|+++|..+.+. .+.+++.+.....
T Consensus 24 v~~l~~G~~n~v~~v---g~~~VlR~~~------~~~~~~----~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~----- 85 (306)
T 3tdw_A 24 VESLGEGFRNYAILV---NGDWVFRFPK------SQQGAD----ELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD----- 85 (306)
T ss_dssp EEEEEECSSEEEEEE---TTTEEEEEES------SHHHHH----HHHHHHHHHHHHTTTCSSBCCCEEEEEECTT-----
T ss_pred eeecCCCcceeEEEE---CCEEEEEecC------CchHHH----HHHHHHHHHHHHHhcCCCCCCCeEeecccCC-----
Confidence 356789999999988 5778888732 122222 347999999999642 3556666654211
Q ss_pred CCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------------------
Q 001143 888 DGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK-------------------- 947 (1141)
Q Consensus 888 ~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~-------------------- 947 (1141)
...++||||++|.+|...... .++..+...++.++...|..||+.
T Consensus 86 --------g~~~~v~e~i~G~~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~ 150 (306)
T 3tdw_A 86 --------GNPFVGYRKVQGQILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKIL 150 (306)
T ss_dssp --------SCEEEEEECCCSEECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHH
T ss_pred --------CceEEEEeccCCeECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHH
Confidence 124899999999887653211 234444445555555555555532
Q ss_pred ----------------------------------------CccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 948 ----------------------------------------HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 948 ----------------------------------------gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
.++|+|++|.||+++.+. .....+.|+||+.+..
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~---~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 151 LLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNS---RQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTC---SSCCEEEECCCTTCEE
T ss_pred HHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCC---CCCceEEEEehhhcCC
Confidence 459999999999998620 0013458999998754
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.90 E-value=7.9e-05 Score=81.29 Aligned_cols=134 Identities=15% Similarity=0.124 Sum_probs=87.4
Q ss_pred ceEeeeecccCce-EEEEEEEC--CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCC
Q 001143 808 LSSCDEAGKSVSS-SLFRCKFG--SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKW 883 (1141)
Q Consensus 808 y~i~~~LG~GsfG-~Vy~a~~~--~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~~ 883 (1141)
|+. +.+..|.+| .||+.... +..+.+|+... .....+ .+|...|+.+. +--+.++++++.+.+
T Consensus 27 ~~~-~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-------~~~~~~----~~E~~~l~~l~~~vPVP~v~~~~~~~~- 93 (272)
T 4gkh_A 27 YRW-ARDNVGQSGATIYRLYGKPNAPELFLKHGKG-------SVANDV----TDEMVRLNWLTAFMPLPTIKHFIRTPD- 93 (272)
T ss_dssp CEE-EEEECSSSSCEEEEEECCTTCCCEEEEEEET-------HHHHHH----HHHHHHHHHHTTTSCCCCEEEEEEETT-
T ss_pred CeE-EEccCCCcCCeEEEEEecCCCeEEEEEECCC-------CCHhHH----HHHHHHHHHhccCCCcCeEEEEEEECC-
Confidence 443 344556665 68987653 45678887542 122233 68999998884 444678888776543
Q ss_pred CCCCCCCCccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHHC----------------
Q 001143 884 LPSADGNPEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHSK---------------- 947 (1141)
Q Consensus 884 ~~~~~g~~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs~---------------- 947 (1141)
..++|||+++|.++.+..... ......+..+++..|..||+.
T Consensus 94 -------------~~~lvme~l~G~~~~~~~~~~---------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~ 151 (272)
T 4gkh_A 94 -------------DAWLLTTAIPGKTAFQVLEEY---------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLA 151 (272)
T ss_dssp -------------EEEEEEECCCSEEHHHHHHHC---------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHH
T ss_pred -------------eEEEEEEeeCCccccccccCC---------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchh
Confidence 349999999998887765431 112233455555555555531
Q ss_pred ------------------------------------------CccccCCCCCCeeeecccccCCCCCeEEEeeccccc
Q 001143 948 ------------------------------------------HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 948 ------------------------------------------gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~ 983 (1141)
.++|||+.+.|||++.+ ..+-|+||+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~-------~~~~viDwe~a~ 222 (272)
T 4gkh_A 152 QAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEG-------KLIGCIDVGRVG 222 (272)
T ss_dssp HHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETT-------EEEEECCCTTCE
T ss_pred hHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECC-------eEEEEEECcccc
Confidence 27899999999999865 456799999873
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.66 E-value=0.00012 Score=84.33 Aligned_cols=76 Identities=14% Similarity=0.145 Sum_probs=53.5
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCC--ccceeeeEecCCCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSC--IVEMYGHKISSKWLPS 886 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpN--IVkllg~~~~~~~~~~ 886 (1141)
.-.+.++.|.+..+|+....+..+++|+... . . .+ .+|+.++..+.... +.+++++.....
T Consensus 44 ~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~-----~-~---~~----~~E~~~l~~L~~~gvpvP~vl~~~~~~~---- 106 (362)
T 3ovc_A 44 SDLMQLSEGEESRAFSFDVGGRGYVLRVNSC-----A-D---GF----YKDRYVYRHFASAALPIPEVLDIGEFSE---- 106 (362)
T ss_dssp EEEEEEEECSSEEEEEEEETTEEEEEEEESC-----C-H---HH----HHHHHHHHHHCCSSSCCCCEEEEEESSS----
T ss_pred ceEEECCCCCcceEEEEEECCcEEEEEeCCc-----h-h---hH----HHHHHHHHHHHhcCCCCceEEEeccCCC----
Confidence 4567889999999999988888888887531 1 1 23 68888998886433 556666655321
Q ss_pred CCCCCccccceEEEEEeeccCCCH
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSV 910 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL 910 (1141)
...++||||++|.++
T Consensus 107 ---------g~~~lv~e~l~G~~l 121 (362)
T 3ovc_A 107 ---------SLTYCISRRAQGVTL 121 (362)
T ss_dssp ---------SCEEEEEECCCSEET
T ss_pred ---------CCeEEEEEecCCCCc
Confidence 134999999997654
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.51 E-value=0.00016 Score=82.28 Aligned_cols=86 Identities=10% Similarity=-0.013 Sum_probs=51.9
Q ss_pred eEeeee-cccCceEEEEEEEC--------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C--CCccceee
Q 001143 809 SSCDEA-GKSVSSSLFRCKFG--------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H--SCIVEMYG 876 (1141)
Q Consensus 809 ~i~~~L-G~GsfG~Vy~a~~~--------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H--pNIVkllg 876 (1141)
...+.| +.|....+|+.... +..+++|+........ ..... .+.+|+.+++.+. + -.+.+++.
T Consensus 23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~-~~~~~----~~~~E~~~l~~L~~~~~vpvP~v~~ 97 (357)
T 3ats_A 23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVP-VFPTY----RLDHQFEVIRLVGELTDVPVPRVRW 97 (357)
T ss_dssp EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCC-SSSCC----CHHHHHHHHHHHHHHCCSCCCCEEE
T ss_pred EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccc-cCchh----HHHHHHHHHHHHhhcCCCCCCcEEE
Confidence 445778 89999999998764 5566777643211000 00011 2367888888884 3 35677887
Q ss_pred eEecCCCCCCCCCCCccccceEEEEEeeccCCCH
Q 001143 877 HKISSKWLPSADGNPEHHLLQSAIFMEYVKGGSV 910 (1141)
Q Consensus 877 ~~~~~~~~~~~~g~~~~~~~~~~LVmEy~~ggSL 910 (1141)
+..+.... ...++||||++|..+
T Consensus 98 ~~~~~~~~-----------g~~~~v~e~l~G~~l 120 (357)
T 3ats_A 98 IETTGDVL-----------GTPFFLMDYVEGVVP 120 (357)
T ss_dssp EECSSTTT-----------SSCEEEEECCCCBCC
T ss_pred EccCCCcc-----------CCceEEEEecCCCCh
Confidence 76543211 123899999998654
No 424
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.48 E-value=0.0005 Score=76.54 Aligned_cols=76 Identities=18% Similarity=0.122 Sum_probs=53.5
Q ss_pred eEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCC---CccceeeeEecCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHS---CIVEMYGHKISSKWL 884 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp---NIVkllg~~~~~~~~ 884 (1141)
.-.+.|+.|.++.||++... +..+++|+..... ...... +.+|++.|+.+.+. .+++++++..
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~----~~~~~~----~~~E~~~L~~L~~~~~v~vP~v~~~~~----- 84 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA----PALDGL----FRAEALGLDWLGRSFGSPVPQVAGWDD----- 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC----CCCTTH----HHHHHHHHHHHTCSTTCCSCCEEEEET-----
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCC----cchhHH----HHHHHHHHHHHHhcCCCCcCeEEEecC-----
Confidence 34678999999999999874 5678888743211 111122 37899999999764 5777776531
Q ss_pred CCCCCCCccccceEEEEEeeccCCCH
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGSV 910 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggSL 910 (1141)
.++||||++|+++
T Consensus 85 -------------~~lvme~l~g~~~ 97 (288)
T 3d1u_A 85 -------------RTLAMEWVDERPP 97 (288)
T ss_dssp -------------TEEEEECCCCCCC
T ss_pred -------------cEEEEEecccCCC
Confidence 1899999998763
No 425
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.41 E-value=0.0016 Score=72.94 Aligned_cols=30 Identities=20% Similarity=0.339 Sum_probs=26.2
Q ss_pred CCccccCCCCCCeeeecccccCCCCCeEEEeeccccc
Q 001143 947 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 947 ~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~ 983 (1141)
.+++|||+++.||+++.+ +.+.|+||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~-------~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGEN-------EQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGG-------GCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCC-------CcEEEEehhhcc
Confidence 579999999999999765 579999999774
No 426
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.19 E-value=0.00083 Score=77.80 Aligned_cols=82 Identities=12% Similarity=0.005 Sum_probs=45.4
Q ss_pred EeeeecccCceEEEEEEE--CCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C-CC-ccceeeeEecCCCC
Q 001143 810 SCDEAGKSVSSSLFRCKF--GSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H-SC-IVEMYGHKISSKWL 884 (1141)
Q Consensus 810 i~~~LG~GsfG~Vy~a~~--~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H-pN-IVkllg~~~~~~~~ 884 (1141)
-.+.||.|.++.||++.. .+..+++|.......... ........++..|.++++.+. + |. +.+++.+. ...
T Consensus 34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~-~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~~- 109 (397)
T 2olc_A 34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVG-ESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TEM- 109 (397)
T ss_dssp EEEECCSSSSEEEEEEEC----CEEEEEEECCC--------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TTT-
T ss_pred EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccC-CCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CCc-
Confidence 457899999999999954 456788886431110000 000001123367888888773 2 33 44555432 111
Q ss_pred CCCCCCCccccceEEEEEeeccCC
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGG 908 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~gg 908 (1141)
.++||||++|.
T Consensus 110 -------------~~lvmE~l~g~ 120 (397)
T 2olc_A 110 -------------AVTVMEDLSHL 120 (397)
T ss_dssp -------------TEEEECCCTTS
T ss_pred -------------cEEEEEeCCCc
Confidence 28999999863
No 427
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.91 E-value=0.0011 Score=64.83 Aligned_cols=55 Identities=18% Similarity=0.234 Sum_probs=27.8
Q ss_pred EEEccCCCCC-CCCcccccCCCCCCCccEEEeecCCCCccCc-cccCCcCCcEEEccCCCCC
Q 001143 45 VIDVSGKTVD-FPLIESYGNRGGDNSVEGLYLYKNVLNLIPK-SVGRYEKLRNLKFFGNEIN 104 (1141)
Q Consensus 45 ~LdLs~N~Ls-~~~p~~~~~l~~L~~L~~L~Ls~N~Lt~iP~-~l~~L~~L~~L~Ls~N~L~ 104 (1141)
.+|.++++|+ ..+|..+. .+|++|+|++|+|+.||. .|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp-----~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP-----VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC-----TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC-----cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5556666555 12222111 345555666665555554 2455555555555555553
No 428
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.72 E-value=0.001 Score=69.75 Aligned_cols=87 Identities=13% Similarity=0.069 Sum_probs=38.9
Q ss_pred CCCCCCCCEEEccCC-CCCCCCc-ccccCCCCCCCccEEEeecCCCC-----ccCccccCCcCCcEEEccCCCCC-----
Q 001143 37 VNDDDDDSVIDVSGK-TVDFPLI-ESYGNRGGDNSVEGLYLYKNVLN-----LIPKSVGRYEKLRNLKFFGNEIN----- 104 (1141)
Q Consensus 37 f~~l~~L~~LdLs~N-~Ls~~~p-~~~~~l~~L~~L~~L~Ls~N~Lt-----~iP~~l~~L~~L~~L~Ls~N~L~----- 104 (1141)
+.+.+.|+.|+|++| +|...-. .....+..-+.|+.|+|++|.|+ .|-..+..-+.|+.|+|++|+|+
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 344556666666654 5532100 00111122245666666666655 12223333344666666666655
Q ss_pred cCchhhcCCCCCCEEEccC
Q 001143 105 LFPSEVGNLLGLECLQIKI 123 (1141)
Q Consensus 105 ~lP~~~~~L~~L~~L~Ls~ 123 (1141)
.|-+.+..-+.|+.|+|++
T Consensus 117 ala~aL~~N~tL~~L~L~n 135 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADN 135 (197)
T ss_dssp HHHHHTTTTCCCSEEECCC
T ss_pred HHHHHHhhCCceeEEECCC
Confidence 1223333334455555543
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=96.68 E-value=0.0019 Score=66.60 Aligned_cols=82 Identities=11% Similarity=0.066 Sum_probs=45.5
Q ss_pred CCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecCC-CCcc-CccccCC----cCCcEEEccCCC-CCcC-chhhcC
Q 001143 41 DDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKNV-LNLI-PKSVGRY----EKLRNLKFFGNE-INLF-PSEVGN 112 (1141)
Q Consensus 41 ~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N~-Lt~i-P~~l~~L----~~L~~L~Ls~N~-L~~l-P~~~~~ 112 (1141)
..|+.||||++.|+. ..+..+.++++|+.|+|+++. ||.- =..+..+ ++|+.|+|+++. ||.- =..+.+
T Consensus 61 ~~L~~LDLs~~~Itd---~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~ 137 (176)
T 3e4g_A 61 YKIQAIDATDSCIMS---IGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHH 137 (176)
T ss_dssp CCEEEEEEESCCCCG---GGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGG
T ss_pred ceEeEEeCcCCCccH---HHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhc
Confidence 467777777776553 233344556777777777763 5521 1234443 257777777753 6521 123455
Q ss_pred CCCCCEEEccCCC
Q 001143 113 LLGLECLQIKISS 125 (1141)
Q Consensus 113 L~~L~~L~Ls~N~ 125 (1141)
+++|+.|+|++..
T Consensus 138 ~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 138 FRNLKYLFLSDLP 150 (176)
T ss_dssp CTTCCEEEEESCT
T ss_pred CCCCCEEECCCCC
Confidence 6666666665544
No 430
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.66 E-value=0.0074 Score=66.98 Aligned_cols=71 Identities=13% Similarity=0.117 Sum_probs=42.7
Q ss_pred eeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecCCCCCCCCC
Q 001143 811 CDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISSKWLPSADG 889 (1141)
Q Consensus 811 ~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~~~~~~~~g 889 (1141)
.+.|+.|....+|++ ..+.+|+..... ....+. .+|+.+++.+. +.-..+++++..+.
T Consensus 23 i~~l~gG~tN~~~~~----~~~vlR~~~~~~-----~~~~~r----~~E~~~l~~l~~~g~~P~~~~~~~~~-------- 81 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA----GDLCLRIPGKGT-----EEYINR----ANEAVAAREAAKAGVSPEVLHVDPAT-------- 81 (301)
T ss_dssp CEEEESCSSEEEEEE----TTEEEEEECC---------CCCH----HHHHHHHHHHHHTTSSCCEEEECTTT--------
T ss_pred eeEcCCcccccccee----eeEEEECCCCCc-----cceeCH----HHHHHHHHHHHHcCCCCceEEEECCC--------
Confidence 688999999999998 677888764211 111111 46777777764 22224555543211
Q ss_pred CCccccceEEEEEeec-cCCCH
Q 001143 890 NPEHHLLQSAIFMEYV-KGGSV 910 (1141)
Q Consensus 890 ~~~~~~~~~~LVmEy~-~ggSL 910 (1141)
.++||||+ +|.+|
T Consensus 82 --------~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 82 --------GVMVTRYIAGAQTM 95 (301)
T ss_dssp --------CCEEEECCTTCEEC
T ss_pred --------CEEEEeecCCCccC
Confidence 17899999 65443
No 431
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.66 E-value=0.0015 Score=68.47 Aligned_cols=110 Identities=16% Similarity=0.164 Sum_probs=73.8
Q ss_pred hhcCCCCCcEEEccCC-CCCc-----cCccccCCCCCCEEEccCCccc-----cccccccCCCCCCEEEccCCCCC----
Q 001143 159 EIAGLKCLTKLSVCHF-SIRY-----LPPEIGCLSNLEQLDLSFNKMK-----YLPTEICYLKALISLKVANNKLV---- 223 (1141)
Q Consensus 159 ~l~~L~~L~~L~Ls~N-~L~~-----iP~~l~~l~~L~~L~Ls~N~L~-----~iP~~l~~l~~L~~L~Ls~N~L~---- 223 (1141)
.+.+-+.|+.|+|++| +|.. |-..+..-+.|+.|+|++|+|. .|-..+..-+.|+.|+|++|.|+
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga 115 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELL 115 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHH
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHH
Confidence 3455567888888875 7662 3334555578888888888887 34455666678899999999887
Q ss_pred -cCCcCccCCCCCCEEeCCCCCCCCCC-------cccccCCCCCCEEEccCCc
Q 001143 224 -ELPSGLYLLQRLENLDLSNNRLTSLG-------SLDLCLMHNLQNLNLQYNK 268 (1141)
Q Consensus 224 -~IP~~l~~L~~L~~L~Ls~N~Lt~~~-------p~~l~~L~~L~~L~Ls~N~ 268 (1141)
.|-..+..-+.|+.|+|++|....+. ...+..-+.|..|+|+.|.
T Consensus 116 ~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 116 ARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp HHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 33445555566899999876432222 2234455788888887664
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.60 E-value=0.0068 Score=70.77 Aligned_cols=32 Identities=9% Similarity=0.351 Sum_probs=27.1
Q ss_pred HHCCccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 945 HSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 945 Hs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
+...++|||++|.|||++.+ + ++++||+.+..
T Consensus 230 ~~~~liHGDl~~~Nil~~~~-------~-~~lID~e~a~~ 261 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQD-------S-TQVIDPEFSFY 261 (420)
T ss_dssp BCCEEECSCCSGGGEEECSS-------C-EEECCCTTCEE
T ss_pred CCCeEEecCCCCCcEEEeCC-------C-CEEEeCccccc
Confidence 35679999999999999865 3 99999998864
No 433
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.17 E-value=0.017 Score=64.41 Aligned_cols=150 Identities=15% Similarity=0.131 Sum_probs=77.3
Q ss_pred eEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C-CCccceeeeEecCCCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H-SCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H-pNIVkllg~~~~~~~~~~ 886 (1141)
.-.+.|+.|....+|+....+..+++|+.... .....+ ..|+.++..+. + -.+.+++... +...+
T Consensus 25 ~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~------~~~~~l----~~e~~~l~~L~~~g~~vP~~~~~~-~g~~~-- 91 (322)
T 2ppq_A 25 TSYKGIAEGVENSNFLLHTTKDPLILTLYEKR------VEKNDL----PFFLGLMQHLAAKGLSCPLPLPRK-DGELL-- 91 (322)
T ss_dssp EEEEEECC---EEEEEEEESSCCEEEEEECC---------CCHH----HHHHHHHHHHHHTTCCCCCBCCBT-TCCSC--
T ss_pred eEeeccCCCcccceEEEEeCCccEEEEEeCCC------CCHHHH----HHHHHHHHHHHHCCCCCCcccCCC-CCCEE--
Confidence 44577888999999999887667888876421 011122 46777777664 2 1133333211 00000
Q ss_pred CCCCCccccceEEEEEeeccCCCHH-----------HH---HHHhhhc-CCC---CCC---HHHHHH------------H
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSVK-----------NY---IEKLSET-GEK---HVS---VKLALF------------I 933 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL~-----------~~---I~~~~~~-~~~---~Ls---~~~i~~------------I 933 (1141)
.......++||+|++|..+. .. ++..... ... ... +..... +
T Consensus 92 -----~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l 166 (322)
T 2ppq_A 92 -----GELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGL 166 (322)
T ss_dssp -----EEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTH
T ss_pred -----EEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhh
Confidence 00012458999999975421 11 2221100 000 011 111000 0
Q ss_pred HHHHHHHHHHHHH-------CCccccCCCCCCeeeecccccCCCCCeEEEeeccccc
Q 001143 934 AQDVAAALVELHS-------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 934 a~QIa~gL~yLHs-------~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~ 983 (1141)
...+...+++++. .+++|+|+.+.|||++.+ ..+.|+||+.+.
T Consensus 167 ~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~-------~~~~lIDf~~a~ 216 (322)
T 2ppq_A 167 REEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGD-------ELSGLIDFYFAC 216 (322)
T ss_dssp HHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETT-------EEEEECCCTTCE
T ss_pred HHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCC-------ceEEEecchhcc
Confidence 1123445566653 369999999999999865 345799999774
No 434
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=96.13 E-value=0.045 Score=61.52 Aligned_cols=76 Identities=12% Similarity=0.040 Sum_probs=55.2
Q ss_pred EeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC---CCCccceeeeEecCCCCCC
Q 001143 810 SCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR---HSCIVEMYGHKISSKWLPS 886 (1141)
Q Consensus 810 i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~---HpNIVkllg~~~~~~~~~~ 886 (1141)
-.+.|+.|.+..+|+....+..+.+|+.... .... +..|++.|+.|. ...+++++++....+
T Consensus 40 ~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~-------~~~~----~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g---- 104 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLINDEVQTVFVKINERS-------YRSM----FRAEADQLALLAKTNSINVPLVYGIGNSQG---- 104 (312)
T ss_dssp EEEEECCSSSSEEEEEESSSCEEEEEEEEGG-------GHHH----HHHHHHHHHHHHHTTSSBCCCEEEEEECSS----
T ss_pred eeEEeCCccceeeeEEEECCCeEEEEeCCcc-------cHHH----HHHHHHHHHHHHhhCCCCcceEEEEeecCC----
Confidence 4577899999999999877778888875421 1222 378988888874 356788888765432
Q ss_pred CCCCCccccceEEEEEeeccCCCH
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGSV 910 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggSL 910 (1141)
..++||||++|..+
T Consensus 105 ----------~~~lvme~l~G~~~ 118 (312)
T 3jr1_A 105 ----------HSFLLLEALNKSKN 118 (312)
T ss_dssp ----------EEEEEEECCCCCCC
T ss_pred ----------ceEEEEEeccCCCC
Confidence 35999999998753
No 435
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=95.85 E-value=0.0024 Score=65.80 Aligned_cols=33 Identities=12% Similarity=0.105 Sum_probs=15.4
Q ss_pred CCcEEEccCCCCCcc-CccccCCCCCCEEEccCC
Q 001143 165 CLTKLSVCHFSIRYL-PPEIGCLSNLEQLDLSFN 197 (1141)
Q Consensus 165 ~L~~L~Ls~N~L~~i-P~~l~~l~~L~~L~Ls~N 197 (1141)
.|+.|+++++.|+.. -..+..+++|+.|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 355555555554421 122344555555555554
No 436
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.84 E-value=0.02 Score=64.25 Aligned_cols=35 Identities=34% Similarity=0.468 Sum_probs=26.5
Q ss_pred CCccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 947 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 947 ~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
..++|||+.+.|||++.+. .+...+.|+||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~---~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPER---EGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTS---CGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCc---CCCCCeEEEeCCCcCc
Confidence 4799999999999997631 0014689999998854
No 437
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.70 E-value=0.057 Score=63.98 Aligned_cols=73 Identities=18% Similarity=0.130 Sum_probs=45.7
Q ss_pred EeeeecccCceEEEEEEECC--ccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCc-cceeeeEecCCCCCC
Q 001143 810 SCDEAGKSVSSSLFRCKFGS--ADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCI-VEMYGHKISSKWLPS 886 (1141)
Q Consensus 810 i~~~LG~GsfG~Vy~a~~~~--~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNI-Vkllg~~~~~~~~~~ 886 (1141)
-.+.|+.|-...+|++...+ ..+.+|+..-.. .. .. +. .+|..++..|...++ .++++.+. +
T Consensus 112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~--~~--~i-dR----~~E~~vl~~L~~~gl~P~ll~~~~--~---- 176 (458)
T 2qg7_A 112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKT--DE--II-NR----EREKKISCILYNKNIAKKIYVFFT--N---- 176 (458)
T ss_dssp EEEEECC--CEEEEEEEETTTTEEEEEEEECC-C--CS--CS-CH----HHHHHHHHHHTTSSSBCCEEEEET--T----
T ss_pred EEEEcCCCeEeEEEEEEECCCCceEEEEECCCCh--hh--hc-CH----HHHHHHHHHHHhcCCCCCEEEEeC--C----
Confidence 35678889999999999876 677888753211 00 00 01 478888888864344 56666552 1
Q ss_pred CCCCCccccceEEEEEeeccCCC
Q 001143 887 ADGNPEHHLLQSAIFMEYVKGGS 909 (1141)
Q Consensus 887 ~~g~~~~~~~~~~LVmEy~~ggS 909 (1141)
.+||||++|.+
T Consensus 177 ------------G~v~e~I~G~~ 187 (458)
T 2qg7_A 177 ------------GRIEEFMDGYA 187 (458)
T ss_dssp ------------EEEEECCCSEE
T ss_pred ------------eEEEEeeCCcc
Confidence 46999998743
No 438
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.30 E-value=0.018 Score=65.73 Aligned_cols=29 Identities=24% Similarity=0.398 Sum_probs=24.1
Q ss_pred CccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 948 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 948 gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
+++|+|+++.|||++.+ .+.|+||..|..
T Consensus 213 ~l~HgDl~~~Nil~~~~--------~~~lID~e~a~~ 241 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNK--------CLRLIDFEYSGF 241 (369)
T ss_dssp EEECSCCCGGGEEECC---------CEEECCCTTCEE
T ss_pred EEEeCCCCcccEEecCC--------cEEEEEecCCCC
Confidence 59999999999999754 489999998753
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=94.89 E-value=0.037 Score=63.92 Aligned_cols=143 Identities=17% Similarity=0.225 Sum_probs=77.7
Q ss_pred eeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEecC
Q 001143 812 DEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKISS 881 (1141)
Q Consensus 812 ~~LG~GsfG~Vy~a~~~---------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~~~ 881 (1141)
+.|..|-...+|++... +..+.+++. .. ........ .+|..+++.+. +.-..++++.+.+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~-g~----~~~~~~~~----~rE~~vl~~L~~~gv~P~ll~~~~~- 125 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLY-GA----ILQGVDSL----VLESVMFAILAERSLGPQLYGVFPE- 125 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEEC-C-------CCHHHH----HHHHHHHHHHHHTTSSCCEEEEETT-
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEEC-CC----ccchHHHH----HHHHHHHHHHHhcCCCCeEEEEcCC-
Confidence 56777888889998864 245666653 11 11111222 57888888874 3334666665431
Q ss_pred CCCCCCCCCCccccceEEEEEeeccCCCHH--------------HHHHHhhhcC---CCCC--CHHHHHHHHHHHHH---
Q 001143 882 KWLPSADGNPEHHLLQSAIFMEYVKGGSVK--------------NYIEKLSETG---EKHV--SVKLALFIAQDVAA--- 939 (1141)
Q Consensus 882 ~~~~~~~g~~~~~~~~~~LVmEy~~ggSL~--------------~~I~~~~~~~---~~~L--s~~~i~~Ia~QIa~--- 939 (1141)
.+||||++|..|. ..+.+..... .+.. -+.++.++..++..
T Consensus 126 -----------------g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~ 188 (379)
T 3feg_A 126 -----------------GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPP 188 (379)
T ss_dssp -----------------EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCC
T ss_pred -----------------ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccC
Confidence 4899999875432 1222211111 1112 24566666655422
Q ss_pred ----------------HHHHHHH--------CCccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 940 ----------------ALVELHS--------KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 940 ----------------gL~yLHs--------~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
.+..|.+ ..++|+|+.+.||+++.+. ...+.+.++||..|..
T Consensus 189 ~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~---~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 189 TGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEP---ENADSLMLVDFEYSSY 254 (379)
T ss_dssp CSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC------CCEEECCCTTCEE
T ss_pred cccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCC---CccCcEEEEecccCCc
Confidence 2333332 2599999999999997641 0114789999998853
No 440
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=94.87 E-value=0.23 Score=54.43 Aligned_cols=75 Identities=19% Similarity=0.117 Sum_probs=48.9
Q ss_pred eEeeeecccCceEEEEEEEC-CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-C--CCccceeeeEecCCCC
Q 001143 809 SSCDEAGKSVSSSLFRCKFG-SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-H--SCIVEMYGHKISSKWL 884 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~-~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H--pNIVkllg~~~~~~~~ 884 (1141)
.-.+.+|.|..+.||+.+.. ++.+.+|+..-... .... .+..|++.|+.|. . --+++++++..
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~----~~~~----~~~~Ea~~L~~L~~~~~vpvP~v~~~~~----- 84 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAP----ALDG----LFRAEALGLDWLGRSFGSPVPQVAGWDD----- 84 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCC----CCTT----HHHHHHHHHHHHTCSTTCCSCCEEEEET-----
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCc----chhh----HHHHHHHHHHHHHhhCCCCcceEEeccC-----
Confidence 55788999999999999974 56788886432211 1111 2368999888874 2 23455555421
Q ss_pred CCCCCCCccccceEEEEEeeccCCC
Q 001143 885 PSADGNPEHHLLQSAIFMEYVKGGS 909 (1141)
Q Consensus 885 ~~~~g~~~~~~~~~~LVmEy~~ggS 909 (1141)
.++||||++++.
T Consensus 85 -------------~~lv~e~l~~~~ 96 (288)
T 3f7w_A 85 -------------RTLAMEWVDERP 96 (288)
T ss_dssp -------------TEEEEECCCCCC
T ss_pred -------------ceEEEEeecccC
Confidence 179999998763
No 441
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=94.34 E-value=0.28 Score=52.01 Aligned_cols=99 Identities=15% Similarity=0.104 Sum_probs=61.2
Q ss_pred CCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCCeeeecccccCCCCCeEEEeecccccccc
Q 001143 908 GSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVELHS-KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVPLR 986 (1141)
Q Consensus 908 gSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~yLHs-~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~l~ 986 (1141)
-||.+.++.+ ..++++++++.++.|.+.+|.-+-. +.-..+=+-|..|++..+ |.|-+.+ +.+.
T Consensus 33 vSL~eIL~~~----~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~d-------G~V~f~~-~~s~--- 97 (229)
T 2yle_A 33 LSLEEILRLY----NQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRD-------GAVTLAP-AADD--- 97 (229)
T ss_dssp EEHHHHHHHH----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETT-------SCEEECC-C------
T ss_pred ccHHHHHHHc----CCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecC-------Cceeccc-cccc---
Confidence 3899999863 3589999999999999998877622 111122233577788776 5565543 1110
Q ss_pred ccccccccccCCCCCCCCccCCCcccchhhhccccCCCCCCchhhHHHHHHHHHHHHhC
Q 001143 987 SFLHTCCIAHRGIPAPDVCVGTPRWMAPEVLRAMHKPNLYGLEVDIWSYGCLLLELLTL 1045 (1141)
Q Consensus 987 ~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~s~ksDVWSLGviL~ELLTG 1045 (1141)
.....+.|||... ...+.+.=|||+|++||..+--
T Consensus 98 -------------------~~~~~~~~pe~~~-----~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 98 -------------------AGEPPPVAGKLGY-----SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp ----------------------------CCSS-----SSSCHHHHHHHHHHHHHHHHTT
T ss_pred -------------------ccccCCCChhhcc-----ccchHHHHHHHHHHHHHHHhhc
Confidence 0122366777753 2346889999999999988753
No 442
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=94.22 E-value=0.23 Score=58.13 Aligned_cols=71 Identities=15% Similarity=0.227 Sum_probs=45.5
Q ss_pred EeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001143 810 SCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 879 (1141)
Q Consensus 810 i~~~LG~GsfG~Vy~a~~~---------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~ 879 (1141)
-.+.|+.|....||++... +..+.+|+.... .. ...+ .+|..+++.+. +.-..++++.+.
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~----~~--~~~l----i~E~~~l~~L~~~g~~P~l~~~~~ 146 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP----ET--ESHL----VAESVIFTLLSERHLGPKLYGIFS 146 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC----CC--HHHH----HHHHHHHHHHHHTTSSSCEEEEET
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC----Cc--HHHH----HHHHHHHHHHHhCCCCCcEEEEeC
Confidence 3467888999999999874 356778776211 11 0122 46888888875 333356666542
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCC
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGG 908 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~gg 908 (1141)
+ .+||||++|.
T Consensus 147 ~------------------g~v~e~l~G~ 157 (429)
T 1nw1_A 147 G------------------GRLEEYIPSR 157 (429)
T ss_dssp T------------------EEEECCCCEE
T ss_pred C------------------CEEEEEeCCc
Confidence 1 5899999863
No 443
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=93.48 E-value=0.23 Score=55.17 Aligned_cols=29 Identities=28% Similarity=0.287 Sum_probs=24.0
Q ss_pred CCccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 947 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 947 ~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
..++|||+++.||+++ + .+.|+||+.+..
T Consensus 195 ~~l~HgD~~~~Nil~~-~--------~~~lIDfe~a~~ 223 (328)
T 1zyl_A 195 VLRLHGDCHAGNILWR-D--------GPMFVDLDDARN 223 (328)
T ss_dssp CEECCSSCSGGGEEES-S--------SEEECCCTTCCE
T ss_pred eeeeeCCCCcccEeEc-C--------CCEEEECCCCCc
Confidence 4589999999999997 3 388999998753
No 444
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=93.32 E-value=0.34 Score=56.64 Aligned_cols=73 Identities=8% Similarity=0.086 Sum_probs=45.4
Q ss_pred EeeeecccCceEEEEEEEC---------CccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCC-CCCccceeeeEe
Q 001143 810 SCDEAGKSVSSSLFRCKFG---------SADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALR-HSCIVEMYGHKI 879 (1141)
Q Consensus 810 i~~~LG~GsfG~Vy~a~~~---------~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpNIVkllg~~~ 879 (1141)
-.+.|..|-...+|+.... +..+.+++.... ....-+. .+|..+++.+. +.-..++++.+.
T Consensus 74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~-----t~~~idR----~~E~~~l~~L~~~gi~P~l~~~~~ 144 (424)
T 3mes_A 74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKH-----VGKFYDS----KVELDVFRYLSNINIAPNIIADFP 144 (424)
T ss_dssp EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCC-----C-CCCCH----HHHHHHHHHHHHTTSSCCEEEEET
T ss_pred EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCC-----cchhcCH----HHHHHHHHHHHhcCCCCCEEEEcC
Confidence 3466778889999999876 466777764211 1111111 47888888774 333456665332
Q ss_pred cCCCCCCCCCCCccccceEEEEEeeccCCC
Q 001143 880 SSKWLPSADGNPEHHLLQSAIFMEYVKGGS 909 (1141)
Q Consensus 880 ~~~~~~~~~g~~~~~~~~~~LVmEy~~ggS 909 (1141)
+ ++||||++|..
T Consensus 145 --~----------------~~I~efI~G~~ 156 (424)
T 3mes_A 145 --E----------------GRIEEFIDGEP 156 (424)
T ss_dssp --T----------------EEEEECCCSEE
T ss_pred --C----------------CEEEEEeCCcc
Confidence 1 78999999854
No 445
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=92.83 E-value=0.35 Score=54.56 Aligned_cols=31 Identities=26% Similarity=0.454 Sum_probs=26.6
Q ss_pred CCccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 947 KHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 947 ~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
..++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~-------~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNE-------ESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGG-------GCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCC-------CeEEEEECCCCee
Confidence 369999999999999876 5699999988754
No 446
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=88.15 E-value=2.5 Score=48.97 Aligned_cols=35 Identities=29% Similarity=0.368 Sum_probs=26.1
Q ss_pred CccccCCCCCCeeeecccccCCCCCeEEEeeccccc
Q 001143 948 HIMHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 948 gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~ 983 (1141)
.++|+|+.+.||+++.+.. ....+.+.|+||..|.
T Consensus 245 v~~H~Dl~~~Nil~~~~~~-~~~~~~~~lID~E~a~ 279 (401)
T 3f2s_A 245 VFCHNDCQEGNILLLEGRE-NSEKQKLMLIDFEYSS 279 (401)
T ss_dssp EEECSCCCGGGEEEETTGG-GCSSSCEEECCCTTCE
T ss_pred eEEeccCCcccEEEcCCcc-cCcccceEEEeeccCC
Confidence 5899999999999976411 0112479999999874
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=84.76 E-value=1.8 Score=49.99 Aligned_cols=35 Identities=29% Similarity=0.357 Sum_probs=25.8
Q ss_pred ccccCCCCCCeeeecccccCCCCCeEEEeecccccc
Q 001143 949 IMHRDIKSENILIDLERKKADGKPVVKLCDFDRAVP 984 (1141)
Q Consensus 949 IvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~~ 984 (1141)
++|+|+.+.|||+..+.. ......+.++||..|..
T Consensus 246 fcHnDl~~gNil~~~~~~-~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRE-NSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGG-GCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcc-cCcCCeEEEechHhccC
Confidence 689999999999954311 11226799999998854
No 448
>3isr_A Transglutaminase-like enzymes, putative cysteine; protease, hutchinsoni MCSG, structural genomics; 1.90A {Cytophaga hutchinsonii}
Probab=82.96 E-value=0.4 Score=53.27 Aligned_cols=43 Identities=30% Similarity=0.422 Sum_probs=37.6
Q ss_pred ccchhhhhHHHHHHhhhccCCCCccccccccccc----CCCCcceeEEe
Q 001143 704 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDF----QPHAWNTILVK 748 (1141)
Q Consensus 704 ~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~----~~~~~~~~~~~ 748 (1141)
..|+|++-|.||-.||-.++ ||+|.|.||..- ..|||..+-+-
T Consensus 177 ~~G~C~d~A~l~val~Ra~G--IPAR~VsGy~~~~~~~~~HAW~Evyl~ 223 (293)
T 3isr_A 177 RAGVCRDFAHLGIALCRALS--IPARYFTGYAFKLNPPDFHACFEAYIG 223 (293)
T ss_dssp CEECHHHHHHHHHHHHHHTT--CCEEEEEEEETTCSSCCEEEEEEEEET
T ss_pred CcEehHHHHHHHHHHHHHCC--CCEEEEEEECCCCCCCCeEEEEEEEEC
Confidence 47999999999999999999 999999999863 47999776653
No 449
>2f4m_A Peptide N-glycanase; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: d.3.1.4 PDB: 2f4o_A*
Probab=80.32 E-value=0.64 Score=51.34 Aligned_cols=41 Identities=20% Similarity=0.467 Sum_probs=36.8
Q ss_pred ccchhhhhHHHHHHhhhccCCCCcccccccccccCCCCcceeEEee
Q 001143 704 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDFQPHAWNTILVKK 749 (1141)
Q Consensus 704 ~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 749 (1141)
..|+|++-|.||-.||-.++ ||+|.|-|| ..|||..+-+..
T Consensus 139 r~G~C~d~A~lf~al~Ra~G--IpAR~V~Gy---~~HaW~Evy~~g 179 (295)
T 2f4m_A 139 RCGRCGEWANCFTLCCRALG--FEARYVWDY---TDHVWTEVYSPS 179 (295)
T ss_dssp CEESHHHHHHHHHHHHHHTT--CCEEEEEET---TTEEEEEEEETT
T ss_pred CCEeeHHHHHHHHHHHHHCC--CCEEEEcCC---CCEEEEEEEECC
Confidence 57999999999999999999 999999998 799997766543
No 450
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=63.35 E-value=0.75 Score=54.38 Aligned_cols=65 Identities=9% Similarity=0.043 Sum_probs=18.3
Q ss_pred eEeeeecccCceEEEEEEECC--ccEEEEE----EecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCccceeeeEec
Q 001143 809 SSCDEAGKSVSSSLFRCKFGS--ADAAAKV----RTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMYGHKIS 880 (1141)
Q Consensus 809 ~i~~~LG~GsfG~Vy~a~~~~--~~vAvKI----~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkllg~~~~ 880 (1141)
.+.++|| ||.||++.+.. ..||++. +..+......+.... +.+|..++..++|||+++.+++...
T Consensus 145 ~l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~----~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 145 PIYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTS----LVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp CSTTTSS---BCCC---------CCBGGGC---------------------------------------CBCCCEEEE
T ss_pred cccccCC---chhhhcccccccCCchhhhhccCcccccccccccccccc----ccccccccccccccccCCCcceEEe
Confidence 4456666 99999999864 3566621 111111111122223 3788899999999999999888654
No 451
>1x3z_A Peptide: N-glycanase; hydrolase-hydrolase inhibitor complex; HET: SUC; 2.80A {Saccharomyces cerevisiae} SCOP: d.3.1.4 PDB: 1x3w_A* 3esw_A*
Probab=52.16 E-value=5 Score=44.87 Aligned_cols=45 Identities=16% Similarity=0.349 Sum_probs=37.9
Q ss_pred ccchhhhhHHHHHHhhhccCCCCcccccccccccCCCCcceeEEeeCChh
Q 001143 704 QFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLDFQPHAWNTILVKKGDSW 753 (1141)
Q Consensus 704 ~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 753 (1141)
.-|.|.|=|.+|=.+|=.++ +|+|+|.| ..+|+|..+.....+-|
T Consensus 180 r~G~C~e~A~lF~~llRalG--i~aR~V~~---~~~H~W~EV~~~~~~rW 224 (335)
T 1x3z_A 180 RKGRCGEWCNLFTLILKSFG--LDVRYVWN---REDHVWCEYFSNFLNRW 224 (335)
T ss_dssp CEECHHHHHHHHHHHHHTTT--CCEEEEEE---TTTEEEEEEEETTTTEE
T ss_pred CCcChHHHHHHHHHHHHHCC--CCeEEEec---CCCcEEEEEEECCCCCE
Confidence 46999999999999999999 99999987 46899987777554434
No 452
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=50.36 E-value=3.4 Score=50.55 Aligned_cols=31 Identities=19% Similarity=0.396 Sum_probs=29.5
Q ss_pred cccchhhhhHHHHHHhhhccCCCCccccccccc
Q 001143 703 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYL 735 (1141)
Q Consensus 703 ~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~ 735 (1141)
+++|+|+|=|-+|=.+|=.++ ||+|.|-||.
T Consensus 267 V~~G~C~~fA~~~~~~lR~lG--IPaR~Vtgy~ 297 (692)
T 1vjj_A 267 VRYGQCWVFAGTLNTALRSLG--IPSRVITNFN 297 (692)
T ss_dssp EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEE
T ss_pred ccceeeHHHHHHHHHHHHhCC--CCeeEEcccc
Confidence 579999999999999999999 9999999995
No 453
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=47.05 E-value=4.8 Score=49.15 Aligned_cols=32 Identities=16% Similarity=0.345 Sum_probs=30.1
Q ss_pred cccchhhhhHHHHHHhhhccCCCCcccccccccc
Q 001143 703 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLD 736 (1141)
Q Consensus 703 ~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~ 736 (1141)
+++|.|.|=|-+|=.++=.++ ||+|.|-||..
T Consensus 267 V~~G~C~~fA~v~~t~lR~lG--IPaR~Vtgy~s 298 (695)
T 1g0d_A 267 VKYGQCWVFAAVACTVLRCLG--IPTRPITNFAS 298 (695)
T ss_dssp EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEEE
T ss_pred ccceeeHHHHHHHHHHHHhCC--CCeeEEccccc
Confidence 579999999999999999999 99999999964
No 454
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=46.85 E-value=5 Score=49.21 Aligned_cols=31 Identities=23% Similarity=0.408 Sum_probs=29.9
Q ss_pred cccchhhhhHHHHHHhhhccCCCCccccccccc
Q 001143 703 VQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYL 735 (1141)
Q Consensus 703 ~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~ 735 (1141)
.++|+|+|=|-+|=.+|-.++ ||+|.|.||.
T Consensus 272 ~k~G~C~dfA~~~~~llRalG--IPAR~VsGy~ 302 (687)
T 2q3z_A 272 VKYGQCWVFAAVACTVLRCLG--IPTRVVTNYN 302 (687)
T ss_dssp EEEECHHHHHHHHHHHHHHHT--CCEEEEEEEE
T ss_pred cceeehHHHHHHHHHHHHhCC--CCcEEEeecc
Confidence 789999999999999999999 9999999997
No 455
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=42.75 E-value=6.2 Score=48.55 Aligned_cols=33 Identities=21% Similarity=0.499 Sum_probs=30.6
Q ss_pred ccccchhhhhHHHHHHhhhccCCCCcccccccccc
Q 001143 702 SVQFGVCRHRAVLLKYLCDRVEPPVPCELVRGYLD 736 (1141)
Q Consensus 702 ~~~~g~~~hr~~l~k~~~d~~~~~~~~~~~~g~~~ 736 (1141)
.+++|.|.|=|-+|=.++=+++ ||||.|.||..
T Consensus 308 PV~~G~C~~fA~v~~~~lR~lG--IPaRvVtgy~s 340 (731)
T 1ex0_A 308 PVRYGQCWVFAGVFNTFLRCLG--IPARIVTNYFS 340 (731)
T ss_dssp CEEEECHHHHHHHHHHHHHHHT--CCEEEEEEEEE
T ss_pred ccceeeehhHHHHHHHHHHhCC--CCeeEEccccc
Confidence 3689999999999999999999 99999999974
No 456
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=34.63 E-value=35 Score=35.83 Aligned_cols=50 Identities=2% Similarity=-0.136 Sum_probs=40.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCCeeeecccccCCCCCeEEEeecccc
Q 001143 924 HVSVKLALFIAQDVAAALVELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRA 982 (1141)
Q Consensus 924 ~Ls~~~i~~Ia~QIa~gL~yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA 982 (1141)
.++....++++.+|+....+++ .-+|--|.|+||+++.+ +.+++.-.|+-
T Consensus 77 ~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL~f~~~-------~~p~i~~RGik 126 (215)
T 4ann_A 77 SFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDELFFTRD-------GLPIAKTRGLQ 126 (215)
T ss_dssp GSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGEEECTT-------SCEEESCCEET
T ss_pred hcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceEEEcCC-------CCEEEEEccCc
Confidence 4888999999999988775543 34677899999999988 78888877753
No 457
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=29.72 E-value=84 Score=33.03 Aligned_cols=50 Identities=6% Similarity=-0.029 Sum_probs=39.9
Q ss_pred CCCHHHHHHHHHHHHHHHH-HHHHCCccccCCCCCCeeeecccccCCCCCeEEEeecccc
Q 001143 924 HVSVKLALFIAQDVAAALV-ELHSKHIMHRDIKSENILIDLERKKADGKPVVKLCDFDRA 982 (1141)
Q Consensus 924 ~Ls~~~i~~Ia~QIa~gL~-yLHs~gIvHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA 982 (1141)
.++..+.++++.+|+.... ++ ..-+|--|.|+||+++.+ +.+++.-.|+-
T Consensus 81 ~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL~f~~~-------~~p~i~hRGi~ 131 (219)
T 4ano_A 81 KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENLMFNRA-------LEPFFLHVGVK 131 (219)
T ss_dssp TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGEEECTT-------CCEEESCCEET
T ss_pred hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceEEEeCC-------CcEEEEEcCCc
Confidence 3788999999988887666 44 455777899999999988 78998887753
No 458
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=25.22 E-value=6.9 Score=30.61 Aligned_cols=28 Identities=25% Similarity=0.133 Sum_probs=11.6
Q ss_pred Cceeeeecccchhh--hhhhhhhHHHHHhH
Q 001143 330 SSISTVSSSNSRSL--TARKSSKQWKRHHL 357 (1141)
Q Consensus 330 ~~~~~~~~~~~~~l--~~~~~c~~~~~~~~ 357 (1141)
+.|++.+..|+.++ ++..++++|||++.
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34444444444442 23233335544443
No 459
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=24.87 E-value=2.1e+02 Score=32.00 Aligned_cols=158 Identities=11% Similarity=0.031 Sum_probs=80.0
Q ss_pred CCCCCCCCC---ceEeeeecccCceEEEEEEECCccEEEEEEecccCCCChHHHHHhHHhHHHHHHHHhhCCCCCcccee
Q 001143 799 GLDPGSFPS---LSSCDEAGKSVSSSLFRCKFGSADAAAKVRTLKVCGSSADEIRNFEYSCLGEVRMLGALRHSCIVEMY 875 (1141)
Q Consensus 799 ~~~~~~~~~---y~i~~~LG~GsfG~Vy~a~~~~~~vAvKI~~l~~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpNIVkll 875 (1141)
.++...|.. ++.++..-.|+.|.++.+. .+..+.||- . ..... +.+-.++...-.+.-|+..-+.
T Consensus 59 ~i~~i~w~~l~~v~~I~~s~~Gstgvff~~t-d~~~~VVK~--s-----~~l~~----E~l~s~LA~~LGlpiP~~Riv~ 126 (342)
T 1cja_A 59 DIGDINWKNLQQFKGIERSEKGTEGLFFVET-ESGVFIVKR--S-----TNIES----ETFCSLLCMRLGLHAPKVRVVS 126 (342)
T ss_dssp CTTCCCTTCGGGEEEEEECCSTTSCEEEEEE-SSCEEEEEC--C-----TTHHH----HHHHHHHHHHHTCCCCCEEEEE
T ss_pred cccccccccccCeeEEEeccCCCCCeEEEEe-CCCEEEEeC--c-----HHHHH----HHHHHHHHHHhCCCCCCeeEEe
Confidence 345556666 7788888888876655555 455555552 1 11111 2234566655566677643221
Q ss_pred ee----------EecCCCCCCCCCC--CccccceEEEEEeeccCCCHHHHHHHhhhcCCCCCCHHHHHHHHHHHHHHHHH
Q 001143 876 GH----------KISSKWLPSADGN--PEHHLLQSAIFMEYVKGGSVKNYIEKLSETGEKHVSVKLALFIAQDVAAALVE 943 (1141)
Q Consensus 876 g~----------~~~~~~~~~~~g~--~~~~~~~~~LVmEy~~ggSL~~~I~~~~~~~~~~Ls~~~i~~Ia~QIa~gL~y 943 (1141)
-. ....+.. +. .........++|||.+|..|...-.... ...+..+....+.+ +-+++.
T Consensus 127 ~~~~E~~e~~~~L~~~~~~----~~~l~~l~~~~~~l~meyv~G~~L~e~~~~~~---~~~f~~~~~k~LG~--Ii~FDi 197 (342)
T 1cja_A 127 SNSEEGTNMLECLAAIDKS----FRVITTLANQANILLMELVRGITLNKLTTTSA---PEVLTKSTMQQLGS--LMALDV 197 (342)
T ss_dssp SSSHHHHHHHHHHHHHCSS----SCHHHHHTTCSEEEEEECCCEEESTTCCSSSH---HHHSCHHHHHHHHH--HHHHHH
T ss_pred eCcHHHHHHHHHHHHhhhh----hHHHHHhhcccceehhhhcCCCccccchhhhh---hhhcCHHHHHhhch--hheehh
Confidence 11 0000000 00 0000112469999999766543311000 01133333333322 456777
Q ss_pred HHHCC----c-cccCCCCCCeeeecccccCCCCCeEEEeeccccc
Q 001143 944 LHSKH----I-MHRDIKSENILIDLERKKADGKPVVKLCDFDRAV 983 (1141)
Q Consensus 944 LHs~g----I-vHrDLKP~NILld~~~~~~~~~~~vKL~DFGlA~ 983 (1141)
+..++ . .+.--.+.|||++.++ +.+.++|-+.+.
T Consensus 198 ~InN~DR~Pl~W~n~GN~~NIL~~~~n------~~~~~IDhn~af 236 (342)
T 1cja_A 198 IVNNSDRLPIAWTNEGNLDNIMLSERG------ATVVPIDSKIIP 236 (342)
T ss_dssp HHTCCSSSCSSSCSCCCGGGEEEESBT------TCEEECSCCCCC
T ss_pred hhcCCccCcccccCCCChhheEEeCCC------CeEEEEcCCccc
Confidence 77652 2 2223578899998762 468899998874
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=24.40 E-value=82 Score=28.66 Aligned_cols=50 Identities=14% Similarity=0.077 Sum_probs=30.6
Q ss_pred CCCCccccCCCCCCCCCCCCEEEccCCCCCCCCcccccCCCCCCCccEEEeecC
Q 001143 25 EANKINNEKNGSVNDDDDDSVIDVSGKTVDFPLIESYGNRGGDNSVEGLYLYKN 78 (1141)
Q Consensus 25 ~~N~i~~i~~~~f~~l~~L~~LdLs~N~Ls~~~p~~~~~l~~L~~L~~L~Ls~N 78 (1141)
++..++.|...+|.++.+|+.+.|-.+ ++.+-.. .|.++.+|+.+.|...
T Consensus 4 ~g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~---aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 4 EGEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDG---MFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTT---SSTTCTTCCCEEECCS
T ss_pred CCCccCEecHHHhcCCCCCcEEEcCCc-hheEcHH---HHhccCCccEEEEcCC
Confidence 345677777777777777777777654 3333332 3344567777777554
No 461
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=20.09 E-value=93 Score=28.27 Aligned_cols=37 Identities=8% Similarity=-0.006 Sum_probs=15.8
Q ss_pred hcCCCCCCEEEccCCCCCCCcccccCCCCCCEEECCC
Q 001143 110 VGNLLGLECLQIKISSPGVNGFALNKLKGLKELELSK 146 (1141)
Q Consensus 110 ~~~L~~L~~L~Ls~N~l~~~~~~~~~L~~L~~L~Ls~ 146 (1141)
|.++++|+.+.|-.+-...-...|.++.+|+.+.+..
T Consensus 16 F~~c~~L~~i~iP~~v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 16 FAGNTVIREITVQPNIGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp TTTCTTCCCEEECTTSSCCCTTSSTTCTTCCCEEECC
T ss_pred hcCCCCCcEEEcCCchheEcHHHHhccCCccEEEEcC
Confidence 4445555555444332222223444444444444443
Done!