BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 001149
(1138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A4IHD2|ARIP4_XENTR Helicase ARIP4 OS=Xenopus tropicalis GN=rad54l2 PE=2 SV=1
Length = 1396
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 293/838 (34%), Positives = 442/838 (52%), Gaps = 140/838 (16%)
Query: 326 VQFSSKSKLMNSVTLDGDLSAGASIEVLGDAITG------YIVNVVREKGEEAVRIPSSI 379
+Q S + N V DGD++ S + DA+ +VN+ E+ + + +
Sbjct: 208 LQISDNADSTNEV--DGDITTENSGSHVNDALNQADHLGRVLVNINHPPNEKDIFLAPQL 265
Query: 380 SAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSV 439
+ +K+HQ+ GIRF+++N+++S+ + SG G GCILAH+MGLGKT QVI+FL +
Sbjct: 266 ARAVKSHQIGGIRFLYDNLVESLERF-SGSSGFGCILAHSMGLGKTLQVISFLDVLFQHT 324
Query: 440 NLGLRTALIVTPVNVLHNWKQEFMKWRPS----------ELKPLRVFMLEDVSRDR---- 485
+ +T L + PVN L NW EF W P EL R F + ++ +
Sbjct: 325 SA--KTVLAIVPVNTLQNWLAEFNMWLPPPESLPKDHNQELVQPRAFKVHTMNDEHKTTA 382
Query: 486 -RAELLAKWRAKGGVFLIGYTAFRNLSFGKHV-----------------------KDRNM 521
RA+++ W GGV L+GY +R LS K + + M
Sbjct: 383 ARAKVVNDWATDGGVLLMGYEMYRLLSLKKSFTAGRKKKSKKAAGPVIIDLDEEDRQQEM 442
Query: 522 AREICHAL-QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 580
+ I AL + GPD+++CDE H IKN A T+QALK ++ +RR+ LTG PLQNNL+EY+C
Sbjct: 443 LKGIEKALSRPGPDVVICDEGHRIKNCHASTSQALKNIRSRRRVVLTGYPLQNNLIEYWC 502
Query: 581 MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM 640
MVDFVR FLG+ EF N F+ PI NGQ +ST +D ++M RSH+L+ L+GFVQR
Sbjct: 503 MVDFVRPDFLGTRQEFSNMFERPILNGQCVDSTPQDKRLMRYRSHVLHSLLEGFVQRRGH 562
Query: 641 NVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL--- 697
V+K LP K VI V+LS +QR LY F++ + R + +G+ L
Sbjct: 563 TVLKAQLPFKEEHVILVRLSKIQRDLYTEFMN------------RFRDAGNSGWLGLNPL 610
Query: 698 ------AQIWNHPGILQLTKDKGYPSRE---DAEDSSSD------------ENMDYNVVI 736
+IWNHP +L K + E D ED ++ E ++
Sbjct: 611 KAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEDLGTNNRCNAQSGKIKVEPNSLGALM 670
Query: 737 GEKPRNMNDFLQG-------KNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC 789
GE LQG + + +W ++L ++ +L S KMVLL ++
Sbjct: 671 GETAHTKQ--LQGIVLNPSHEKANQVVTYEWAKEILSDYIPGQLQNSPKMVLLFHLIEES 728
Query: 790 SNMGDKSLVFSQSIPTLDLIEFYLS--KLPRP----GKQGKLWKKGKDWYRLDGRTESSE 843
MGDK LVFSQS+ TL ++E +L+ K+P P G++G W + ++YRLDG T +SE
Sbjct: 729 MRMGDKILVFSQSLSTLSIMEEFLAKRKMPIPAGSDGQEGHTWIRNVNYYRLDGSTSASE 788
Query: 844 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 903
R++L+ +FN+P N++V L+STRAG LG+NL ANRV++ D SWNP +D QA+ R +RY
Sbjct: 789 RERLINQFNDPSNEKVWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRY 848
Query: 904 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDE 963
GQ KP + YRL++ T+E+KIY RQ+TK+G++ RVVD ++ E+ +L F ++E
Sbjct: 849 GQRKPCYIYRLVSDFTLEKKIYDRQITKQGMSDRVVDDLNPEVNFTRREVENLLHFVEEE 908
Query: 964 NPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLMESLLGK---HHPRWISN-YH 1019
PD S Q+ + + H E++L K +P I+
Sbjct: 909 -PD-----------ASRQHLDSSSFH--------------EAVLQKACLQYPHLITKEPF 942
Query: 1020 EHETLLQENEEERLSKEEQDMAWEVFRKSLEWEEVQRVTVD---ESISERKPASMSNL 1074
+HE+LL + +E++L+ E+ A +EE +R +V S ++ PA NL
Sbjct: 943 QHESLLLDRKEQKLTLAEKKAA------KRGYEEEKRASVPYTRPSYTQYYPAPDHNL 994
>sp|Q9Y4B4|ARIP4_HUMAN Helicase ARIP4 OS=Homo sapiens GN=RAD54L2 PE=1 SV=4
Length = 1467
Score = 451 bits (1161), Expect = e-125, Method: Compositional matrix adjust.
Identities = 271/716 (37%), Positives = 397/716 (55%), Gaps = 83/716 (11%)
Query: 355 DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 414
DA+ +VN+ EE V + ++ +K HQ+ GIRF+++N+++S+ + K+ G GC
Sbjct: 243 DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 301
Query: 415 ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 465
ILAH+MGLGKT QVI+F+ R + +T L + PVN L NW EF W
Sbjct: 302 ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPA 359
Query: 466 --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 516
+P E++P +V +L D + RA+++A W ++GGV L+GY +R L+ K
Sbjct: 360 DNKPEEVQPRFFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATG 419
Query: 517 --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 555
+ + RE AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 420 RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 479
Query: 556 KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 615
K ++ +RR+ LTG PLQNNL+EY+CMVDFVR FLG+ EF N F+ PI NGQ +ST +
Sbjct: 480 KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 539
Query: 616 DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 675
DV++M RSH+L+ L+GFVQR V+K LP K VI V+LS +QR LY +F+D
Sbjct: 540 DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLYTQFMDRF- 598
Query: 676 FTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRE---DAEDSSS------ 726
D S+ + + + +IWNHP +L K + E D E+ S
Sbjct: 599 --RDCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKESLANEQDLDVEELGSAGTSAR 656
Query: 727 ---------DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQK-------DWWNDLLHEHTY 770
E+ +GE + FLQG + F ++ +W DLL +
Sbjct: 657 CPPQGTKGKGEDSTLASSMGEA--TNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNYQT 714
Query: 771 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LPRP----GKQGK 824
L+ S KMVLL ++ +GDK LVFSQS+ TL LIE +L K +P P G+ +
Sbjct: 715 GVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQ 774
Query: 825 LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 884
W + ++RLDG T + ER++L+ +FN+P N L+STRAG LG+NL ANRV++
Sbjct: 775 KWVRNISYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVF 834
Query: 885 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV 944
D SWNP +D QA+ R +RYGQ KP + YRL+A T+E+KIY RQ++K+G++ RVVD
Sbjct: 835 DASWNPCHDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVDDLNP 894
Query: 945 HRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPLSHE 996
+++E+ +L F + E P P +++ + + S C L K P HE
Sbjct: 895 MLNFTRKEVENLLHFVEKE-PAPQVSLNVKGIKESVLQLACLKYPHLITKEPFEHE 949
>sp|Q99NG0|ARIP4_MOUSE Helicase ARIP4 OS=Mus musculus GN=Rad54l2 PE=1 SV=1
Length = 1466
Score = 448 bits (1153), Expect = e-124, Method: Compositional matrix adjust.
Identities = 273/723 (37%), Positives = 398/723 (55%), Gaps = 97/723 (13%)
Query: 355 DAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGC 414
DA+ +VN+ EE V + ++ +K HQ+ GIRF+++N+++S+ + K+ G GC
Sbjct: 242 DALGRVLVNLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKT-SSGFGC 300
Query: 415 ILAHTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKW--------- 465
ILAH+MGLGKT QVI+F+ R + +T L + PVN L NW EF W
Sbjct: 301 ILAHSMGLGKTLQVISFIDVLFR--HTPAKTVLAIVPVNTLQNWLAEFNMWLPAPEALPA 358
Query: 466 --RPSELKP--LRVFMLEDVSRD--RRAELLAKWRAKGGVFLIGYTAFRNLSFGKHV--- 516
+P E++P +V +L D + RA++ A W ++GGV L+GY +R L+ K +
Sbjct: 359 DSKPEEVQPRFFKVHILNDEHKTVASRAKVTADWVSEGGVLLMGYEMYRLLTLKKSLATS 418
Query: 517 --------------------KDRNMAREICHAL-QDGPDILVCDEAHMIKNTRADTTQAL 555
+ + RE AL + GPD+++CDE H IKN +A T+QAL
Sbjct: 419 RPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQAL 478
Query: 556 KQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSE 615
K ++ +RR+ LTG PLQNNL+EY+CMVDFVR FLG+ EF N F+ PI NGQ +ST +
Sbjct: 479 KNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQ 538
Query: 616 DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 675
DV++M RSH+L+ L+GFVQR V+K LP K VI V+LS +QR LY +F+D
Sbjct: 539 DVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDLYTQFMD--- 595
Query: 676 FTNDRVSNEKIRKSFFAGYQAL---------AQIWNHPGIL-------QLTKDKGYPSRE 719
+ R +G+ L +IWNHP +L L ++ E
Sbjct: 596 ---------RFRDCGTSGWLGLNPLKAFCVCCKIWNHPDVLYEALQKENLANEQDLDVEE 646
Query: 720 DAEDSSSDENMDYNV-VIGEK---PRNMND-----FLQGKNDDGFFQK-------DWWND 763
+S + V GE P +M + FLQG + F ++ +W +
Sbjct: 647 LGSAGTSARCPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKE 706
Query: 764 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSK--LP-RPG 820
LL + L+ S KMVLL ++ +GDK LVFSQS+ TL LIE +L K +P PG
Sbjct: 707 LLTNYQTGVLENSPKMVLLFHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCLPG 766
Query: 821 KQG---KLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHS 877
+G + W + ++RLDG T + ER++L+ +FN+P N L+STRAG LG+NL
Sbjct: 767 AEGQGTQKWVRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIG 826
Query: 878 ANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAAR 937
ANRV++ D SWNP +D QA+ R +RYGQ KP YRL+A T+E+KIY RQ++K+G++ R
Sbjct: 827 ANRVVVFDASWNPCHDAQAVCRVYRYGQKKPCHIYRLVADYTLEKKIYDRQISKQGMSDR 886
Query: 938 VVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCA----LKHKLPL 993
VVD +++E+ +L F + E P P T++ + + S C L K P
Sbjct: 887 VVDDLNPMLNFTRKEVENLLHFVEKE-PAPQTSLDIKGIKESVLQLACLKYPHLITKEPF 945
Query: 994 SHE 996
HE
Sbjct: 946 EHE 948
>sp|Q9GQN5|ATRX_DROME Transcriptional regulator ATRX homolog OS=Drosophila melanogaster
GN=XNP PE=1 SV=2
Length = 1311
Score = 444 bits (1141), Expect = e-123, Method: Compositional matrix adjust.
Identities = 282/844 (33%), Positives = 455/844 (53%), Gaps = 120/844 (14%)
Query: 287 KRKQKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSA 346
++ ++K IR+I+ +L TK E +R++R++ Q KL N + + +
Sbjct: 376 QKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQ-------KLYNRIFVKSE--- 425
Query: 347 GASIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVK 406
S+E I +++ E + +++ + KLK HQV G++FMW+ +++++ +
Sbjct: 426 --SVE-----INELVLDFDEESKKALLQVDKGLLKKLKPHQVAGVKFMWDACFETLKESQ 478
Query: 407 SGDKGLGCILAHTMGLGKTFQVIAFLYTAM-RSVNLGLRTALIVTPVNVLHNWKQEFMKW 465
G GCILAH MGLGKT QV+ +T + + G+ LI++P++ ++NW +EF W
Sbjct: 479 E-KPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISPLSTVNNWAREFTSW 537
Query: 466 -RPSELKPLRVFMLEDVSRDR----RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRN 520
+ + + V+ D+SR + R L +W +GGV ++GY +R L+ K R
Sbjct: 538 MKFANRNDIEVY---DISRYKDKPTRIFKLNEWFNEGGVCILGYDMYRILANEKAKGLRK 594
Query: 521 MARE-ICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEY 578
RE + AL D GPD++VCDE H++KN + ++A+ +++ +RRI LTG+PLQNNL EY
Sbjct: 595 KQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREY 654
Query: 579 YCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRM 638
YCM+ FV+ LG+ E+ NRF NPI NGQ+T+ST D+++M RSHIL++ L+G +QR
Sbjct: 655 YCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRR 714
Query: 639 DMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKS--FFAGYQA 696
D +V+ LPPK +V+ LS LQ++LY ++ H ++ + + K F +Q
Sbjct: 715 DYSVLAPYLPPKHEYVVYTTLSELQQKLYGYYMTTH---REQSGGDVVGKGARLFQDFQD 771
Query: 697 LAQIWNHPGILQLTKD---------------KGYPSREDAEDSSSDENMDY--------- 732
L +IW HP L++ D +G+ E ED ++ + D
Sbjct: 772 LRRIWTHPMNLRVNSDNVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDAS 831
Query: 733 --------NVVIGEKPRNMNDFLQGKNDD----------GFFQKD----WWNDLLHEHTY 770
V K RN N + D QKD WW + E
Sbjct: 832 MSGLAASSGKVKKRKTRNGNAGGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEEREL 891
Query: 771 KELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL----- 825
+ +S K+++LL +L C +GDK LVFSQS+ +LD+IE +LS + K +
Sbjct: 892 NNVHHSPKLLILLRLLQQCEAIGDKLLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVG 951
Query: 826 -----WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANR 880
W GKD++RLDG +R+ + ++FN N R + LISTRAG LGINL +ANR
Sbjct: 952 DFKGCWTSGKDYFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANR 1011
Query: 881 VIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD 940
V+I D SWNP++D Q+I+R +R+GQ KP + YRL+A GTME+K+Y+RQV K+ A RV+D
Sbjct: 1012 VVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1071
Query: 941 RQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSD 1000
QQ+ R ++ +++ L+ + + + ++P+ + D
Sbjct: 1072 EQQISRHYNQTDLMELYSY----------------------ELKPSTEREMPILPK---D 1106
Query: 1001 KLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVFRKSLEWEEVQRVTVD 1060
+L +L +H + I YHEH++LL++ E E L++EE+ AW + E E+ + V
Sbjct: 1107 RLFAEILTEHE-KLIFKYHEHDSLLEQEEHENLTEEERKSAWAEY----EAEKTRTVQAS 1161
Query: 1061 ESIS 1064
+ +S
Sbjct: 1162 QYMS 1165
>sp|P46100|ATRX_HUMAN Transcriptional regulator ATRX OS=Homo sapiens GN=ATRX PE=1 SV=5
Length = 2492
Score = 320 bits (820), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 170/385 (44%), Positives = 242/385 (62%), Gaps = 16/385 (4%)
Query: 358 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 417
T +++ E E V++ ++ KLK HQV G++FMW+ +S++K K G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593
Query: 418 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 475
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653
Query: 476 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 533
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713
Query: 534 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 593
D +VCDE H++KN + ++A+ ++ +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773
Query: 594 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 653
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833
Query: 654 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 709
V+ V+++ +Q +LY+ +LD L G N+ K F +Q L++IW HP LQL
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893
Query: 710 --TKDKGYPSREDAED----SSSDE 728
++KGY ED+ D S SDE
Sbjct: 1894 ISKENKGYFD-EDSMDEFIASDSDE 1917
Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 180/297 (60%), Gaps = 28/297 (9%)
Query: 759 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 818
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059
Query: 819 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 868
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119
Query: 869 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 928
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179
Query: 929 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALK 988
VTK+ L+ RVVD+QQV R + E+ L+ F D DP N+ K
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP--------------NSEKKKK 2225
Query: 989 HKLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVF 1045
P+ + D ++ LL + H I YHEH++LL EEE L++EE+ AW +
Sbjct: 2226 RDTPMLPK---DTILAELL-QIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEY 2278
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 152 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 206
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230
Query: 207 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 248
C C FC C+ RN+ LS + + + W C C P L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273
>sp|Q7YQM4|ATRX_PANTR Transcriptional regulator ATRX OS=Pan troglodytes GN=ATRX PE=2 SV=1
Length = 2492
Score = 320 bits (819), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 234/368 (63%), Gaps = 11/368 (2%)
Query: 358 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 417
T +++ E E V++ ++ KLK HQV G++FMW+ +S++K K G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593
Query: 418 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 475
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653
Query: 476 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 533
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713
Query: 534 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 593
D +VCDE H++KN + ++A+ ++ +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773
Query: 594 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 653
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833
Query: 654 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 709
V+ V+++ +Q +LY+ +LD L G N+ K F +Q L++IW HP LQL
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893
Query: 710 --TKDKGY 715
++KGY
Sbjct: 1894 ISKENKGY 1901
Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 180/297 (60%), Gaps = 28/297 (9%)
Query: 759 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 818
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059
Query: 819 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 868
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119
Query: 869 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 928
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179
Query: 929 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALK 988
VTK+ L+ RVVD+QQV R + E+ L+ F D DP N+ K
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP--------------NSEKKKK 2225
Query: 989 HKLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVF 1045
P+ + D ++ LL + H I YHEH++LL EEE L++EE+ AW +
Sbjct: 2226 RDTPMLPK---DTILAELL-QIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEY 2278
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 152 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 206
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230
Query: 207 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 248
C C FC C+ RN+ LS + + + W C C P L
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPL 273
>sp|Q7YQM3|ATRX_PONPY Transcriptional regulator ATRX OS=Pongo pygmaeus GN=ATRX PE=2 SV=1
Length = 2492
Score = 320 bits (819), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 170/385 (44%), Positives = 242/385 (62%), Gaps = 16/385 (4%)
Query: 358 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 417
T +++ E E V++ ++ KLK HQV G++FMW+ +S++K K G GCILA
Sbjct: 1535 TKLVLDEDEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKS-PGSGCILA 1593
Query: 418 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPS--ELKPLRV 475
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ + + L V
Sbjct: 1594 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLKDDEKLEV 1653
Query: 476 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 533
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1654 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGP 1713
Query: 534 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 593
D +VCDE H++KN + ++A+ ++ +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1714 DFVVCDEGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1773
Query: 594 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 653
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1774 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1833
Query: 654 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 709
V+ V+++ +Q +LY+ +LD L G N+ K F +Q L++IW HP LQL
Sbjct: 1834 VLAVRMTSIQCKLYQYYLDHLTGVGNNSEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1893
Query: 710 --TKDKGYPSREDAED----SSSDE 728
++KGY ED+ D S SDE
Sbjct: 1894 ISKENKGYFD-EDSMDEFIASDSDE 1917
Score = 234 bits (597), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 180/297 (60%), Gaps = 28/297 (9%)
Query: 759 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 818
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 2000 DWYKDFVTDADAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2059
Query: 819 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 868
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2060 EKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSRKKWAEEFNDETNVRGRLFIISTKA 2119
Query: 869 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 928
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2120 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2179
Query: 929 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALK 988
VTK+ L+ RVVD+QQV R + E+ L+ F D DP N+ K
Sbjct: 2180 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP--------------NSEKKKK 2225
Query: 989 HKLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVF 1045
P+ + D ++ LL + H I YHEH++LL EEE L++EE+ AW +
Sbjct: 2226 RDTPMLPK---DTILAELL-QIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEY 2278
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 6/108 (5%)
Query: 152 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 206
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 171 CTACGQQVNHFQKDSIYRHPSLQVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 230
Query: 207 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLLKRLTS 253
C C FC C+ RN+ LS + + + W C C P L L +
Sbjct: 231 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHPEPLLDLVT 278
>sp|Q61687|ATRX_MOUSE Transcriptional regulator ATRX OS=Mus musculus GN=Atrx PE=1 SV=3
Length = 2476
Score = 319 bits (817), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 164/368 (44%), Positives = 233/368 (63%), Gaps = 11/368 (2%)
Query: 358 TGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILA 417
T +++ E E V++ ++ KLK HQV G++FMW+ +S+ K K G GCILA
Sbjct: 1520 TKLVLDENEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVEKTKKS-PGSGCILA 1578
Query: 418 HTMGLGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRP--SELKPLRV 475
H MGLGKT QV++FL+T + L TAL+V P+N NW EF KW+ ++ + L V
Sbjct: 1579 HCMGLGKTLQVVSFLHTVLLCDKLDFSTALVVCPLNTALNWMNEFEKWQEGLNDNEKLEV 1638
Query: 476 FMLEDVSRDR-RAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQD-GP 533
L V R + R+ +L +W+ GGV +IGY +RNL+ G++VK R + AL D GP
Sbjct: 1639 SELATVKRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKDIFNKALVDPGP 1698
Query: 534 DILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSS 593
D +VCDE H++KN + ++A+ +K +RRI LTG+PLQNNL+EY+CMV+F++E LGS
Sbjct: 1699 DFVVCDEGHILKNEASAVSKAMNSIKSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSI 1758
Query: 594 HEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVF 653
EFRNRF NPI+NGQ +ST DV++M +R+HILYE L G VQR D + K LPPK +
Sbjct: 1759 KEFRNRFINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEY 1818
Query: 654 VITVKLSPLQRRLYKRFLD-LHGFTNDRVSNE-KIRKSFFAGYQALAQIWNHPGILQL-- 709
V+ V+++ +Q +LY+ +LD L G N K F +Q L++IW HP LQL
Sbjct: 1819 VLAVRMTAIQCKLYQYYLDHLTGVGNSTEGGRGKAGAKLFQDFQMLSRIWTHPWCLQLDY 1878
Query: 710 --TKDKGY 715
++KGY
Sbjct: 1879 ISKENKGY 1886
Score = 234 bits (596), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 132/297 (44%), Positives = 180/297 (60%), Gaps = 28/297 (9%)
Query: 759 DWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPR 818
DW+ D + + + L++SGKMVLL +IL M +GDK LVFSQS+ +LDLIE +L R
Sbjct: 1983 DWYKDFVTDTDAEVLEHSGKMVLLFEILRMAEEIGDKVLVFSQSLISLDLIEDFLELASR 2042
Query: 819 PGKQGK----------LWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 868
+ K W + D+YRLDG T + R+K E FN+ N R + +IST+A
Sbjct: 2043 EKTEDKEKPLIYKGEGKWIRNIDYYRLDGSTNAQSRKKWAEEFNDETNVRGRLFIISTKA 2102
Query: 869 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 928
GSLGINL +ANRVII D SWNP+YD+Q+I+R +R+GQTKPV+ YR +A GTME+KIY RQ
Sbjct: 2103 GSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQTKPVYVYRFLAQGTMEDKIYDRQ 2162
Query: 929 VTKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALK 988
VTK+ L+ RVVD+QQV R + E+ L+ F D DP N+ K
Sbjct: 2163 VTKQSLSFRVVDQQQVERHFTMNELTELYTFEPDLLDDP--------------NSEKKKK 2208
Query: 989 HKLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVF 1045
P+ + D ++ LL + H I YHEH++LL EEE L++EE+ AW +
Sbjct: 2209 RDTPMLPK---DTILAELL-QIHKEHIVGYHEHDSLLDHKEEEELTEEERKAAWAEY 2261
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 6/103 (5%)
Query: 152 CTACNNVA-----IEVHPHPILNVIVCKDCKCLLEKKMHVKDADCSECYCVWCGRSSDLV 206
CTAC ++ HP L V++CK+C +D+D + C WC +L+
Sbjct: 170 CTACGQQVNHFQKDSIYRHPSLKVLICKNCFKYYMSDDISRDSDGMDEQCRWCAEGGNLI 229
Query: 207 SCKSCKTLFCTTCVKRNISEACLSDEV-QASCWQCCCCSPSLL 248
C C FC C+ RN+ LS + + + W C C P L
Sbjct: 230 CCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICQPEPL 272
>sp|B4MX21|RAD54_DROWI DNA repair and recombination protein RAD54-like OS=Drosophila
willistoni GN=okr PE=3 SV=1
Length = 784
Score = 265 bits (678), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 188/606 (31%), Positives = 303/606 (50%), Gaps = 111/606 (18%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 436
+S L+ HQ G+RFM++ + G KG GCI+A MGLGKT Q + ++T +
Sbjct: 149 LSNILRPHQREGVRFMYDCV--------EGKKGNFNGCIMADEMGLGKTLQCVTLVWTLL 200
Query: 437 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 493
R + A+IV+P +++ NW++EF KW + L +E S++ + L ++
Sbjct: 201 RQSCECKPTITKAIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTIKALEQF 257
Query: 494 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 547
R V LI Y FR A +C Q+ +++CDE H +KN+
Sbjct: 258 SMNTSTRLGTPVLLISYETFRI-----------YANILC---QNEVGMVICDEGHRLKNS 303
Query: 548 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 607
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+NPI G
Sbjct: 304 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENPILKG 363
Query: 608 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 667
Q+T+S+ ++ + +++ L + + R ++ K LP K VI V+L+ +Q Y
Sbjct: 364 QNTDSSDKERERALEKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVICVRLTSVQLEFY 423
Query: 668 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 718
FL +D+V NEK + A L ++ +HP ++ L +DKG+
Sbjct: 424 TNFLK-----SDKVRRSLADCNEKASLTALADITTLKKLCSHPDLIYEKMLARDKGF--- 475
Query: 719 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 778
EN + KP+++N L GK
Sbjct: 476 ---------ENSQNILPTNYKPKDLNPELSGK---------------------------- 498
Query: 779 MVLLLDIL--TMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 836
+LLD + T+ +N DK ++ S TLDL E +L R K+ + RLD
Sbjct: 499 -FMLLDFMLATIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYTFVRLD 545
Query: 837 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 894
G +R K+V+RFN+P N C L +S++AG G+NL ANR+ + D WNP D
Sbjct: 546 GTMTIKKRSKVVDRFNDPEN---DCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 602
Query: 895 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEM 953
QA+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++
Sbjct: 603 QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDL 662
Query: 954 LHLFEF 959
LF F
Sbjct: 663 KDLFSF 668
>sp|Q9DG67|RA54B_CHICK DNA repair and recombination protein RAD54B OS=Gallus gallus
GN=RAD54B PE=2 SV=1
Length = 918
Score = 265 bits (677), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 194/594 (32%), Positives = 300/594 (50%), Gaps = 77/594 (12%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 438
I+ L+ HQ GI F++E ++ +R SG G ILA MGLGKT Q I+ ++T +R
Sbjct: 299 IANNLRPHQREGIVFLYECVM-GMRV--SGR--FGAILADEMGLGKTLQCISLVWTLLRQ 353
Query: 439 VNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWR 494
G L+ ALIVTP +++ NWK+EF KW SE ++VF V +D + E
Sbjct: 354 GVYGCKPVLKRALIVTPGSLVKNWKKEFQKWLGSER--IKVFT---VDQDHKVEEFIS-S 407
Query: 495 AKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 553
V +I Y R+L D+ A E ++L+CDE H +KN+ TT
Sbjct: 408 PLYSVMIISYEMLLRSL-------DQIQAIEF--------NLLICDEGHRLKNSSIKTTT 452
Query: 554 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 613
AL + C+RRI LTG+P+QN+L E+Y +++FV G LGS +R ++ PI + ++T
Sbjct: 453 ALTNLSCERRIILTGTPIQNDLQEFYALIEFVNPGVLGSLSTYRKIYEEPIVRSREPSAT 512
Query: 614 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLD- 672
E+ + +R+ L F+ R V+ K LPPK +I + + LQ LY++ L
Sbjct: 513 KEEKDLGEKRAAELTRLTGLFILRRTQEVINKFLPPKKENIIFCQPTALQLELYRKLLSS 572
Query: 673 --LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 730
+ R+ N AL ++ NHP +L +E D SDE++
Sbjct: 573 RVISSCLQGRLENS----PHLICIGALKKLCNHPCLL------FKALKEKCCDPKSDEHV 622
Query: 731 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 790
+ + +G D F +D+ +D T+ E+D SGK+ +L+ +L
Sbjct: 623 E------------SSLYEGLTD--VFPQDYTSD-----TFSEID-SGKLQVLVKLLAAIR 662
Query: 791 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 850
+ V L+ Y L + K + G + RLDG T S+RQ++V+
Sbjct: 663 ELSSSERVV--------LVSNYTQTLNVLLETCKCY--GYSYTRLDGNTPVSQRQQIVDS 712
Query: 851 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 910
FN + L+S++AG +G+NL A+ +I+ D WNP D+QA+ R WR GQ V
Sbjct: 713 FNSKFSPAF-IFLLSSKAGGVGLNLVGASHLILYDIDWNPATDIQAMARVWRDGQKCTVH 771
Query: 911 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEEMLHLFEFGDD 962
YRL+ GT+EEKIY+RQ++K+ L+ VVD + H S EE+ +LF ++
Sbjct: 772 IYRLLTTGTIEEKIYQRQISKQDLSGAVVDLSKTSEHIHFSVEELRNLFTLHEN 825
>sp|Q03468|ERCC6_HUMAN DNA excision repair protein ERCC-6 OS=Homo sapiens GN=ERCC6 PE=1 SV=1
Length = 1493
Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 192/636 (30%), Positives = 297/636 (46%), Gaps = 103/636 (16%)
Query: 370 EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 429
+E ++P + KL +Q G+R++WE Q G IL MGLGKT Q+I
Sbjct: 494 DEGFKVPGFLFKKLFKYQQTGVRWLWELHCQQA----------GGILGDEMGLGKTIQII 543
Query: 430 AFL----YTAMRSVNL-----GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 480
AFL Y+ +R+ GL +IV P V+H W +EF W P P RV +L +
Sbjct: 544 AFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFHTWWP----PFRVAILHE 599
Query: 481 V-SRDRRAELLAKWRAK-GGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVC 538
S + E L + A G+ + Y+ R + +++R H ++
Sbjct: 600 TGSYTHKKEKLIRDVAHCHGILITSYSYIR-------LMQDDISRYDWH-------YVIL 645
Query: 539 DEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 598
DE H I+N A T A KQ + RI L+GSP+QNNL E + + DF+ G LG+ F
Sbjct: 646 DEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLGTLPVFME 705
Query: 599 RFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGF-VQRMDMNV-VKKDLPPKTVFVIT 656
+F PI G ++N++ VK + + +L + + + ++RM +V + LP K V+
Sbjct: 706 QFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPDKNEQVLF 765
Query: 657 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 716
+L+ Q ++Y+ F+D R+ N +++ F+G AL +I NHP +
Sbjct: 766 CRLTDEQHKVYQNFVDSKEVY--RILNGEMQ--IFSGLIALRKICNHPDLF--------- 812
Query: 717 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 776
P+N+ K +D L E + S
Sbjct: 813 --------------------SGGPKNL--------------KGLPDDELEEDQFGYWKRS 838
Query: 777 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 836
GKM+++ +L + G + L+FSQS LD++E +L + + ++D
Sbjct: 839 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLR------------AQKYTYLKMD 886
Query: 837 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 896
G T + RQ L+ R+NE + + L++TR G LG+NL ANRV+I D WNP+ D QA
Sbjct: 887 GTTTIASRQPLITRYNE--DTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQA 944
Query: 897 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHL 956
RAWR GQ K V YRL+ GT+EEKIY RQ+ K+ L RV+ + R ++ L
Sbjct: 945 RERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQIFKQFLTNRVLKDPKQRRFFKSNDLYEL 1004
Query: 957 FEFGDDENPDPLTAVSKENGQGSS-QNTNCALKHKL 991
F + + G GS Q C LK ++
Sbjct: 1005 FTLTSPDASQSTETSAIFAGTGSDVQTPKCHLKRRI 1040
>sp|Q92698|RAD54_HUMAN DNA repair and recombination protein RAD54-like OS=Homo sapiens
GN=RAD54L PE=1 SV=2
Length = 747
Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 190/605 (31%), Positives = 297/605 (49%), Gaps = 88/605 (14%)
Query: 366 REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 425
+EK V + +S L+ HQ G++F+WE + R++ GCI+A MGLGKT
Sbjct: 136 KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190
Query: 426 FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 482
Q I ++T +R + A++V+P +++ NW E KW ++PL + + S
Sbjct: 191 LQCITLMWTLLRQSPECKPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAI---DGGS 247
Query: 483 RDRRAELLAKW------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DI 535
+D + L + R + +I Y FR L G LQ G +
Sbjct: 248 KDEIDQKLEGFMNQRGARVSSPILIISYETFR-LHVG--------------VLQKGSVGL 292
Query: 536 LVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHE 595
++CDE H +KN+ T QAL + RR+ ++G+P+QN+L+EY+ +V FV G LG++HE
Sbjct: 293 VICDEGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHE 352
Query: 596 FRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVI 655
F+ F+ PI G+ ++ D ++ +R L + + R +++ K LP K V+
Sbjct: 353 FKKHFELPILKGRDAAASEADRQLGEERLRELTSIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 656 TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 715
+L+PLQ LYKRFL + + K+ S + +L ++ NHP ++
Sbjct: 413 CCRLTPLQTELYKRFLR-QAKPAEELLEGKMSVSSLSSITSLKKLCNHPALI-------- 463
Query: 716 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 775
Y+ + E+ D G D F + + L E
Sbjct: 464 ----------------YDKCVEEE-----DGFVGALD--LFPPGYSSKAL------EPQL 494
Query: 776 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 833
SGKM++L IL + S DK ++ S TLDL E KL + + Y
Sbjct: 495 SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRARRYLYV 541
Query: 834 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 893
RLDG +R K+VERFN P + ++S++AG G+NL ANR+++ D WNP D
Sbjct: 542 RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
Query: 894 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 952
QA+ R WR GQ K + YRL++ GT+EEKI++RQ K+ L++ VVD +Q V R S E
Sbjct: 601 EQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660
Query: 953 MLHLF 957
+ LF
Sbjct: 661 LKELF 665
>sp|A4PBL4|RAD54_ORYSJ DNA repair and recombination protein RAD54 OS=Oryza sativa subsp.
japonica GN=RAD54 PE=1 SV=1
Length = 980
Score = 261 bits (666), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 185/605 (30%), Positives = 307/605 (50%), Gaps = 82/605 (13%)
Query: 372 AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL-GCILAHTMGLGKTFQVIA 430
A+++ + L+ HQ G++FM++ + + D G+ GCILA MGLGKT Q I
Sbjct: 224 AIKVDHLLVRYLRPHQREGVQFMFDCVSGLL-----NDDGISGCILADDMGLGKTLQSIT 278
Query: 431 FLYTAM---RSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 487
LYT + ++ A++VTP +++ NW+ E +KW ++ L + RA
Sbjct: 279 LLYTLLCQGFDAKPMVKRAVVVTPTSLVSNWESEIIKWLKGRVQ------LLALCESTRA 332
Query: 488 ELLA------KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 541
++L+ K ++ V ++ Y FR + R D+L+CDEA
Sbjct: 333 DVLSGIESFLKPLSRLQVLIVSYETFR-------MHSSKFERP------GSCDLLICDEA 379
Query: 542 HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 601
H +KN + T +AL + C+RRI L+G+P+QN+L E++ MV+F G LG + FR ++
Sbjct: 380 HRLKNDQTLTNKALAALPCKRRILLSGTPMQNDLEEFFSMVNFTNPGVLGDATYFRRYYE 439
Query: 602 NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 661
PI G+ +++E+ + ++RS L ++ F+ R ++ LPPK V V+ KL+
Sbjct: 440 APIICGREPTASAEEKNLGSERSAELSAKVNLFILRRTNALLSNHLPPKIVEVVCCKLTA 499
Query: 662 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWNHPGILQLTKDKGYPSRED 720
LQ LY F +H R+ +E ++S Y AL ++ NHP ++ D
Sbjct: 500 LQTALYNHF--IHSKNVKRLISEGTKQSKVLAYITALKKLCNHPKLIY-----------D 546
Query: 721 AEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 780
S++ ++ + P + G++ W +L SGKM
Sbjct: 547 TIKSNNSGGSGFDDCLRFFP---PELFSGRSGSWTGGGGMWVEL-----------SGKMH 592
Query: 781 LLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRT 839
+L +L + D+ ++ S TLDL ++L R ++ + RLDG T
Sbjct: 593 VLARLLGHLRLKTDDRIVLVSNYTQTLDL----FAQLCR--------ERRYPYIRLDGAT 640
Query: 840 ESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYR 899
++RQKLV +FN+P ++ L+S++AG G+NL NR+I+ D WNP D QA R
Sbjct: 641 SINKRQKLVNQFNDP-SRDEFVFLLSSKAGGCGLNLVGGNRLILFDPDWNPANDKQAAAR 699
Query: 900 AWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH-----RTISKEEML 954
WR GQ K V+ YR ++ GT+EEK+Y+RQ++KEGL +V+ ++Q ++S E++
Sbjct: 700 VWRDGQKKRVYIYRFLSTGTIEEKVYQRQMSKEGL-QKVIQQEQADGKMQGSSLSTEDLR 758
Query: 955 HLFEF 959
LF F
Sbjct: 759 DLFTF 763
>sp|B4KHL5|RAD54_DROMO DNA repair and recombination protein RAD54-like OS=Drosophila
mojavensis GN=okr PE=3 SV=1
Length = 783
Score = 259 bits (662), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 186/606 (30%), Positives = 297/606 (49%), Gaps = 111/606 (18%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 436
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + +T +
Sbjct: 145 LSNVLRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLTWTLL 196
Query: 437 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 493
R + A+IV+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 197 RQSPDCKPTISKAIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTTRALEQF 253
Query: 494 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 547
R V LI Y FR H+ +C + +++CDE H +KN+
Sbjct: 254 AMNTATRCGTPVLLISYETFR---LYAHI--------LC---KTEVGMVICDEGHRLKNS 299
Query: 548 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 607
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 300 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRG 359
Query: 608 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 667
Q+ +ST + + Q++ L + + R ++ K LP K V+ VKL+P+Q ++Y
Sbjct: 360 QNADSTDAERQRALQKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCVKLTPVQLQIY 419
Query: 668 KRFLDLHGFTNDRVS------NEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 718
FL +D+V NEK + A L ++ NHP ++ K+KG+
Sbjct: 420 TNFL-----KSDQVRRSLADCNEKASLTALADITTLKKLCNHPDLIYEKIAAKEKGF--- 471
Query: 719 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 778
EN + KP+++N L GK
Sbjct: 472 ---------ENSQNVLPPNYKPKDVNPELSGK---------------------------- 494
Query: 779 MVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 836
+LLD + +N DK ++ S TLDL E +L R K+ + RLD
Sbjct: 495 -FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYTYVRLD 541
Query: 837 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 894
G +R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D
Sbjct: 542 GTMTIKKRSKVVDRFNDP---STDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 598
Query: 895 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEM 953
QA+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++
Sbjct: 599 QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESSEKHFTRDDL 658
Query: 954 LHLFEF 959
LF F
Sbjct: 659 KDLFSF 664
>sp|P70270|RAD54_MOUSE DNA repair and recombination protein RAD54-like OS=Mus musculus
GN=Rad54l PE=1 SV=2
Length = 747
Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 190/605 (31%), Positives = 295/605 (48%), Gaps = 88/605 (14%)
Query: 366 REKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKT 425
+EK V + +S L+ HQ G++F+WE + R++ GCI+A MGLGKT
Sbjct: 136 KEKLPVHVVVDPILSKVLRPHQREGVKFLWECVTS--RRIPGSH---GCIMADEMGLGKT 190
Query: 426 FQVIAFLYTAMRS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 482
Q I ++T +R + A++V+P +++ NW E KW ++PL +
Sbjct: 191 LQCITLMWTLLRQSPECKPEIEKAVVVSPSSLVKNWYNEVEKWLGGRIQPLAIDGGSKDE 250
Query: 483 RDRRAELLAKWRA---KGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCD 539
DR+ E R + +I Y FR L G +K N+ +++CD
Sbjct: 251 IDRKLEGFMNQRGARVPSPILIISYETFR-LHVGV-LKKGNVG------------LVICD 296
Query: 540 EAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNR 599
E H +KN+ T QAL + RR+ ++G+P+QN+L+EY+ +V FV G LG++HEF+
Sbjct: 297 EGHRLKNSENQTYQALDSLNTSRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKH 356
Query: 600 FQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDM----NVVKKDLPPKTVFVI 655
F+ PI + ++ D QR +L G V R + +++ K LP K V+
Sbjct: 357 FELPILKSRDAAASEAD----RQRGEERLRELIGIVNRCLIRRTSDILSKYLPVKIEQVV 412
Query: 656 TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGY 715
+L+PLQ LYKRFL + + K+ S + +L ++ NHP ++
Sbjct: 413 CCRLTPLQTELYKRFLR-QAKPEEELREGKMSVSSLSSITSLKKLCNHPALI-------- 463
Query: 716 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 775
Y+ + E+ D +G G F + + + E
Sbjct: 464 ----------------YDKCVAEE-----DGFEGTL--GIFPPGYNSKAV------EPQL 494
Query: 776 SGKMVLLLDILTMC-SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY- 833
SGKM++L IL + S DK ++ S TLDL E KL + + Y
Sbjct: 495 SGKMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFE-------------KLCRVRRYLYV 541
Query: 834 RLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYD 893
RLDG +R K+VERFN P + ++S++AG G+NL ANR+++ D WNP D
Sbjct: 542 RLDGTMSIKKRAKVVERFNSPSSPDF-VFMLSSKAGGCGLNLIGANRLVMFDPDWNPAND 600
Query: 894 LQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEE 952
QA+ R WR GQ K + YRL++ GT+EEKI++RQ K+ L++ VVD +Q V R S E
Sbjct: 601 EQAMARVWRDGQKKICYIYRLLSAGTIEEKIFQRQSHKKALSSCVVDEEQDVERHFSLGE 660
Query: 953 MLHLF 957
+ LF
Sbjct: 661 LKELF 665
>sp|O12944|RAD54_CHICK DNA repair and recombination protein RAD54-like (Fragment)
OS=Gallus gallus GN=RAD54L PE=2 SV=1
Length = 733
Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 180/593 (30%), Positives = 288/593 (48%), Gaps = 82/593 (13%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 438
+S L+ HQ G++F+W+ + R++ GCI+A MGLGKT Q I ++T +R
Sbjct: 138 LSRVLRPHQREGVKFLWDCVTS--RRIPGSH---GCIMADEMGLGKTLQCITLMWTLLRQ 192
Query: 439 ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRV--FMLEDVSRDRRAELLAK- 492
+ A++V+P +++ NW E KW ++PL + E++ R + +
Sbjct: 193 SPDCKPEIEKAMVVSPSSLVRNWYNEVEKWLGGRIQPLAIDGGSKEEIDRKLVGSMNQRG 252
Query: 493 WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADT 551
R + +I Y FR H + ALQ G +++CDE H +KN+ T
Sbjct: 253 LRVPSPILIISYETFR-----LHAE----------ALQKGSVGLVICDEGHRLKNSENQT 297
Query: 552 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 611
QAL + RR+ ++G+P+QN+L+EY+ +V FV G LG++ EF+ F+ PI G+ +
Sbjct: 298 YQALNSLNTPRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKRHFELPILKGRDAD 357
Query: 612 STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 671
++ + + +R L + + R +++ K LP K V+ +L+PLQ LYK FL
Sbjct: 358 ASEAERQKGEERLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQAELYKNFL 417
Query: 672 DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 731
+ + KI S + +L ++ NHP ++
Sbjct: 418 K-QAKPVEELKEGKINVSSLSSITSLKKLCNHPALI------------------------ 452
Query: 732 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMC-S 790
Y+ + E ++GF + E SGKM++L IL + S
Sbjct: 453 YDKCVEE-------------EEGFMGALDLFPAGYSTKSVEPQLSGKMLVLDYILAVTKS 499
Query: 791 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWY-RLDGRTESSERQKLVE 849
DK ++ S TLDL E KL + + Y RLDG +R K+VE
Sbjct: 500 TSNDKVVLVSNYTQTLDLFE-------------KLCRNRRYLYVRLDGTMSIKKRAKVVE 546
Query: 850 RFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPV 909
RFN P + ++S++AG G+NL ANR+++ D WNP D QA+ R WR GQ K
Sbjct: 547 RFNSPSSPEF-IFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTC 605
Query: 910 FAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEFGD 961
+ YRL++ GT+EEKI++RQ K+ L++ VVD +Q V R S E+ LF +
Sbjct: 606 YIYRLLSTGTIEEKIFQRQTHKKALSSCVVDEEQDVERHFSLGELKELFSLNE 658
>sp|P41410|RAD54_SCHPO DNA repair protein rhp54 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp54 PE=1 SV=2
Length = 852
Score = 258 bits (658), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 191/606 (31%), Positives = 300/606 (49%), Gaps = 91/606 (15%)
Query: 372 AVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAF 431
AV I ++ L+ HQ+ G++F+++ + I + +G CI+A MGLGKT Q IA
Sbjct: 253 AVVIDPKLARILRPHQIEGVKFLYKCVTGRIDRCANG-----CIMADEMGLGKTLQCIAL 307
Query: 432 LYTAMR-SVNLG---LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 487
L+T ++ S G + A+I P +++ NW E +KW + + F+L+ S +
Sbjct: 308 LWTLLKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKD--AITPFILDGKSSKQEL 365
Query: 488 EL-LAKWRAKGG------VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 540
+ L +W + G V + Y R S+ +H+ + + +L+CDE
Sbjct: 366 IMALQQWASVHGRQVTRPVLIASYETLR--SYVEHLNNAEIG------------MLLCDE 411
Query: 541 AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 600
H +KN+ + T AL ++ QRR+ L+G+P+QN+L EY+ +++F G LGS EFR +
Sbjct: 412 GHRLKNSDSLTFTALDKLNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNY 471
Query: 601 QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 660
+ PI G+ + T +D + + + L + + F+ R +++ K LP K V+ LS
Sbjct: 472 EIPILKGRDADGTEKDKENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLS 531
Query: 661 PLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQA---LAQIWNHPGILQLTKDKGYPS 717
Q LYK F+ T+ + N+ +R + +A L +I NHP +L LT+D
Sbjct: 532 EFQLSLYKHFI-----TSPEI-NKILRGTGSQPLKAIGLLKKICNHPDLLNLTEDL---- 581
Query: 718 REDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSG 777
E + G PR + + +N D SG
Sbjct: 582 ----------EGCEALFPPGFIPRELRG--RDRNIDS-------------------SLSG 610
Query: 778 KMVLLLDILTMCSN-MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 836
KM++L +L DK ++ S TLDL E +L R +G RLD
Sbjct: 611 KMLVLERMLYQIKQETDDKIVLISNYTSTLDLFE----QLCR--------ARGYKALRLD 658
Query: 837 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 896
G ++RQ+LV+ FN+P K L+S++AG GINL ANR+I+ D WNP D QA
Sbjct: 659 GTMNVNKRQRLVDTFNDP-EKDAFVFLLSSKAGGCGINLIGANRLILFDPDWNPAADQQA 717
Query: 897 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR-QQVHRTISKEEMLH 955
+ R WR GQ K F YR +A GT+EEKI++RQ K+ L++ VVD Q V R S + +
Sbjct: 718 LARVWRDGQKKDCFVYRFIATGTIEEKIFQRQSHKQSLSSCVVDEAQDVERHFSLDNLRQ 777
Query: 956 LFEFGD 961
LF+ D
Sbjct: 778 LFQLND 783
>sp|B3MMA5|RAD54_DROAN DNA repair and recombination protein RAD54-like OS=Drosophila
ananassae GN=okr PE=3 SV=1
Length = 791
Score = 257 bits (656), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 186/597 (31%), Positives = 299/597 (50%), Gaps = 94/597 (15%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 438
+S L+ HQ G+RFM+E + + K GD GCI+A MGLGKT Q + ++T +R
Sbjct: 155 LSNILRPHQREGVRFMYECV-----EGKKGDFN-GCIMADEMGLGKTLQCVTLVWTLLRQ 208
Query: 439 ---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRA 495
+ A++V+P +++ NW++EF KW L L + + R E + +
Sbjct: 209 GPESKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLAMEGGTKENTIRVLEQFSMTSS 268
Query: 496 KGG--VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 553
K G V LI Y FR + EI + G +++CDE H +KN+ T Q
Sbjct: 269 KLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLTYQ 314
Query: 554 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 613
AL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I GQ+ +ST
Sbjct: 315 ALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENSILRGQNADST 374
Query: 614 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 673
+ K +++ L + + R ++ K LP K VI VKL+ +Q +LY FL+
Sbjct: 375 EGERKKAIEKTQELIGLVDQCIIRRTNQILTKYLPIKFEMVICVKLTAIQLQLYTNFLN- 433
Query: 674 HGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQL---TKDKGYPSREDAEDS 724
+D+V NEK + A L +I +HP ++ K+KG+ + ++ S
Sbjct: 434 ----SDQVRRSLADCNEKASLTALADITTLKKICSHPDLIHQKIEAKEKGFENSQNVLPS 489
Query: 725 SSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLD 784
+ KP+ + ++SGK +LL
Sbjct: 490 NY------------KPKEICP----------------------------EWSGKFMLLDF 509
Query: 785 ILTMCSNMG-DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSE 843
+L G DK ++ S TLDL E +L R K G + RLDG +
Sbjct: 510 MLAAIRAAGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMSIKK 557
Query: 844 RQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRY 903
R K+V++FN+P + ++S++AG G+NL ANR+ + D WNP D QA+ R WR
Sbjct: 558 RSKVVDKFNDP-DSECFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRD 616
Query: 904 GQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 959
GQ KP + YRL+A GT+EEKI +RQ K+ L++ ++D + + +++++ LF F
Sbjct: 617 GQKKPCYIYRLVASGTIEEKILQRQTHKKSLSSTIIDNNESSEKHFTRDDLKDLFSF 673
>sp|O76460|RAD54_DROME DNA repair and recombination protein RAD54-like OS=Drosophila
melanogaster GN=okr PE=1 SV=1
Length = 784
Score = 256 bits (654), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 184/600 (30%), Positives = 297/600 (49%), Gaps = 100/600 (16%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 436
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + ++T +
Sbjct: 152 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203
Query: 437 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 491
R + A++V+P +++ NW++EF KW L P+ E+ R +
Sbjct: 204 RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMT 263
Query: 492 KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 551
R V LI Y FR + EI + G +++CDE H +KN+ T
Sbjct: 264 SARLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309
Query: 552 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 611
QAL +K +RR+ L+G+P+QN+L EYY +V+FV LG++ F+ F++ I GQ+T+
Sbjct: 310 YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369
Query: 612 STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 671
ST ++ + +++ L + + R ++ K LP K VI KL+ +Q LY FL
Sbjct: 370 STEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFL 429
Query: 672 DLHGFTNDRVS------NEKIRKSFFAGYQALAQIWNHPGIL--QLT-KDKGYPSREDAE 722
+D+V NEK + A L +I +HP ++ +LT ++KG+ + ++
Sbjct: 430 -----KSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVL 484
Query: 723 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 782
S+ KP+++N L GK +L
Sbjct: 485 PSNY------------KPKDLNPELSGK-----------------------------FML 503
Query: 783 LDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 840
LD + + DK ++ S TLDL E +L R K G + RLDG
Sbjct: 504 LDFMLAAIRAEGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMS 551
Query: 841 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 900
+R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP D QA+ R
Sbjct: 552 IKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARV 610
Query: 901 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 959
WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++ LF F
Sbjct: 611 WRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTF 670
>sp|B4JCS7|RAD54_DROGR DNA repair and recombination protein RAD54-like OS=Drosophila
grimshawi GN=okr PE=3 SV=1
Length = 786
Score = 255 bits (651), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 182/608 (29%), Positives = 298/608 (49%), Gaps = 115/608 (18%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 436
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + +T +
Sbjct: 145 LSNVLRPHQREGVRFMYECV--------EGKRGSFNGCIMADEMGLGKTLQCVTLTWTLL 196
Query: 437 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 493
R + A++V+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 197 RQSADCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEETTRTLEQF 253
Query: 494 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 547
R V LI Y FR H+ +C + +++CDE H +KN+
Sbjct: 254 AMNTSTRCGTPVLLISYETFR---LYAHI--------LC---KTEVGMVICDEGHRLKNS 299
Query: 548 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 607
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 300 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTATDFKRNFENAILRG 359
Query: 608 QHTNSTSEDVKIMNQRSHILYEQLKGFVQ----RMDMNVVKKDLPPKTVFVITVKLSPLQ 663
Q+ +ST + +R+ + ++L G V R ++ K LP K V+ KL+ +Q
Sbjct: 360 QNADSTDTE----RERALLKTQELIGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQ 415
Query: 664 RRLYKRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKG 714
++Y FL +D+V NEK + + L ++ NHP ++ ++KG
Sbjct: 416 LQIYTNFLK-----SDQVCRSLADCNEKTSLTALSDITTLKKLCNHPDLIYEKLAAREKG 470
Query: 715 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 774
+ EN + KP+++N L GK
Sbjct: 471 F------------ENSQNVLPANYKPKDINPELSGK------------------------ 494
Query: 775 YSGKMVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDW 832
+LLD + +N DK ++ S TLDL E +L R K+ +
Sbjct: 495 -----FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYSY 537
Query: 833 YRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTY 892
RLDG +R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP
Sbjct: 538 VRLDGTMTIKKRSKVVDRFNDP-SSDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAN 596
Query: 893 DLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKE 951
D QA+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + V + +++
Sbjct: 597 DEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESVEKHFTRD 656
Query: 952 EMLHLFEF 959
++ LF F
Sbjct: 657 DLKDLFSF 664
>sp|B3NAN8|RAD54_DROER DNA repair and recombination protein RAD54-like OS=Drosophila
erecta GN=okr PE=3 SV=1
Length = 784
Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 188/607 (30%), Positives = 295/607 (48%), Gaps = 108/607 (17%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 436
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + ++T +
Sbjct: 152 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203
Query: 437 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 491
R + A++V+P +++ NW++EF KW L P+ E+ R +
Sbjct: 204 RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMT 263
Query: 492 KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 551
R V LI Y FR + EI + G +++CDE H +KN+ T
Sbjct: 264 SSRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309
Query: 552 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 611
QAL +K +RR+ L+G+P+QN+L EYY +V+FV LG++ F+ F++ I GQ+T+
Sbjct: 310 YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369
Query: 612 STSEDVKIMNQRSHILYEQLKGFVQ----RMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 667
ST + QR+ ++L G V R ++ K LP K VI KL+ +Q LY
Sbjct: 370 STDAE----RQRAIAKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELY 425
Query: 668 KRFLDLHGFTNDRVS------NEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 718
FL +D+V EK + A L +I +HP ++ +DKG+
Sbjct: 426 TNFL-----KSDQVRRSLADCKEKASLTALADITTLKKICSHPNLIYEKITARDKGF--- 477
Query: 719 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 778
E+S + +YN +++N L GK
Sbjct: 478 ---ENSQNVLPSNYNA------KDLNPELSGK---------------------------- 500
Query: 779 MVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 836
+LLD + ++ DK ++ S TLDL E +L R K G + RLD
Sbjct: 501 -FMLLDFMLAAIRADGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLD 547
Query: 837 GRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 896
G +R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP D QA
Sbjct: 548 GTMSIKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 606
Query: 897 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLH 955
+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++
Sbjct: 607 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKD 666
Query: 956 LFEFGDD 962
LF F D
Sbjct: 667 LFTFDAD 673
>sp|B4NXB8|RAD54_DROYA DNA repair and recombination protein RAD54-like OS=Drosophila
yakuba GN=okr PE=3 SV=2
Length = 784
Score = 252 bits (644), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 183/603 (30%), Positives = 295/603 (48%), Gaps = 100/603 (16%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 436
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + ++T +
Sbjct: 152 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203
Query: 437 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELK--PLRVFMLEDVSRDRRAELLA 491
R + A++V+P +++ NW++EF KW L P+ E+ R +
Sbjct: 204 RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLQGRLLCLPMEGGTKENTIRALEQFSMT 263
Query: 492 KWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADT 551
R V LI Y FR + EI + G +++CDE H +KN+ T
Sbjct: 264 SSRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNSDNLT 309
Query: 552 TQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTN 611
QAL +K +RR+ L+G+P+QN+L EYY +V+FV LG++ F+ F++ I GQ+T+
Sbjct: 310 YQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTD 369
Query: 612 STSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL 671
ST + + +++ L + + R ++ K LP K VI KL+ +Q LY FL
Sbjct: 370 STEGERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTSIQLELYTNFL 429
Query: 672 DLHGFTNDRVS------NEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSREDAE 722
+D+V NEK + A L +I +HP ++ ++KG+ E
Sbjct: 430 -----KSDQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKITAREKGF------E 478
Query: 723 DSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLL 782
+S + +YN +++N L GK +L
Sbjct: 479 NSQNVLPSNYNT------KDLNPELSGK-----------------------------FML 503
Query: 783 LDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTE 840
LD + ++ DK ++ S TLDL E +L R K G + RLDG
Sbjct: 504 LDFMLAAIRADGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGTMS 551
Query: 841 SSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRA 900
+R K+V+RFN+P + ++S++AG G+NL ANR+ + D WNP D QA+ R
Sbjct: 552 IKKRSKVVDRFNDPESDSF-LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARV 610
Query: 901 WRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLHLFEF 959
WR GQ KP + YR++A G++EEKI +RQ K+ L++ ++D + + +++++ LF F
Sbjct: 611 WRDGQKKPCYIYRMVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTF 670
Query: 960 GDD 962
D
Sbjct: 671 DAD 673
>sp|Q29KH2|RAD54_DROPS DNA repair and recombination protein RAD54-like OS=Drosophila
pseudoobscura pseudoobscura GN=okr PE=3 SV=2
Length = 782
Score = 251 bits (641), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 186/607 (30%), Positives = 303/607 (49%), Gaps = 106/607 (17%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 436
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q +A ++T +
Sbjct: 148 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVALVWTLL 199
Query: 437 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 493
+ + +IV+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 200 KQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKENTVRALEQF 256
Query: 494 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 547
R V LI Y FR + EI + G +++CDE H +KN+
Sbjct: 257 SMNASTRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNS 302
Query: 548 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 607
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 303 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRG 362
Query: 608 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 667
Q+ +ST ++ +++ L + + + R ++ K LP K VI KL+P+Q +LY
Sbjct: 363 QNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLY 422
Query: 668 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 718
FL +D+V EK + A L ++ +HP ++ ++KG+
Sbjct: 423 TNFL-----KSDQVRRSLADCKEKASLTALADITTLKKLCSHPNLICEKIAAEEKGF--- 474
Query: 719 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 778
E+S + ++YN GE +N L GK +K LD+
Sbjct: 475 ---ENSQNILPINYNPK-GE----INPELSGK-------------------FKLLDFM-- 505
Query: 779 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 838
+ + ++ DK ++ S TLDL E +L R K G + RLDG
Sbjct: 506 ------LAAIRAHGNDKVVLISNYTQTLDLFE----QLARKRKYG--------FVRLDGT 547
Query: 839 TESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 896
+R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D QA
Sbjct: 548 MSIKKRSKVVDRFNDP---ESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 604
Query: 897 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLH 955
+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++
Sbjct: 605 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKD 664
Query: 956 LFEFGDD 962
LF F D
Sbjct: 665 LFSFDPD 671
>sp|Q6PFE3|RA54B_MOUSE DNA repair and recombination protein RAD54B OS=Mus musculus
GN=Rad54b PE=2 SV=1
Length = 886
Score = 250 bits (639), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 186/601 (30%), Positives = 296/601 (49%), Gaps = 89/601 (14%)
Query: 373 VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 432
V I + L+ HQ GI F++E ++ +R V G ILA MGLGKT Q I+ +
Sbjct: 264 VVIDPHLVHHLRPHQKDGIIFLYECVM-GMRAVGK----CGAILADEMGLGKTLQCISLI 318
Query: 433 YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 488
+T G ++ LIVTP ++++NW++EF KW SE +++F V +D + E
Sbjct: 319 WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWRKEFQKWLGSER--IKIFT---VDQDHKVE 373
Query: 489 LLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTR 548
V +I Y ++ + + I L L+CDE H +KN+
Sbjct: 374 EFIN-STFHSVLIISYEML--------LRSLDQIKTIPFGL------LICDEGHRLKNSS 418
Query: 549 ADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQ 608
TT AL + C++ + LTG+P+QN+L E++ +VDFV G LGS +R ++ PI +
Sbjct: 419 IKTTTALSSLSCEKTVILTGTPVQNDLQEFFALVDFVNPGILGSLSSYRKIYEEPIIISR 478
Query: 609 HTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYK 668
+S+ E+ ++ +R+ L F+ R V+ K LPPK V+ + LQ LY+
Sbjct: 479 EPSSSKEERELGERRATELTRLTGRFILRRTQEVINKYLPPKIENVVFCRPGALQIELYR 538
Query: 669 RFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 721
+ L L G + + AL ++ NHP +L + S +
Sbjct: 539 KLLRSQSVRFCLQGLLEN--------SAHLICIGALKKLCNHPCLL-------FSSVKGK 583
Query: 722 EDSSS-DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMV 780
E SSS +EN + N+ G ++ F G N F +++ SGK+
Sbjct: 584 EFSSSCEENEERNLCQGL----LSVFPAGYNPLQFSEEE----------------SGKLQ 623
Query: 781 LLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 838
+L+ +L + + +K ++ S TL+++E + G RLDG+
Sbjct: 624 VLVKLLAVIHELRPTEKVILVSNYRQTLNVLEEVCK------------RHGYACARLDGQ 671
Query: 839 TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIY 898
T S+RQ +V+ FN + L+S++AG +G+NL + +I+ D WNP D+QA+
Sbjct: 672 TPVSQRQHIVDSFNSKYSTDF-IFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDIQAMS 730
Query: 899 RAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVD--RQQVHRTISKEEMLHL 956
R WR GQ PV YRL+ GT+EEKIY+RQ++K+GL+ VVD R H S EE+ +L
Sbjct: 731 RVWRDGQKHPVHIYRLLTTGTIEEKIYQRQISKQGLSGAVVDLTRSSEHIQFSVEELKNL 790
Query: 957 F 957
F
Sbjct: 791 F 791
>sp|B4GS98|RAD54_DROPE DNA repair and recombination protein RAD54-like OS=Drosophila
persimilis GN=okr PE=3 SV=1
Length = 782
Score = 249 bits (637), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 186/607 (30%), Positives = 301/607 (49%), Gaps = 106/607 (17%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 436
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q +A ++T +
Sbjct: 148 LSNILRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVALVWTLL 199
Query: 437 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 493
+ + +IV+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 200 KQSAECKPTINKCIIVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKENTVRALEQF 256
Query: 494 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 547
R V LI Y FR + EI + G +++CDE H +KN+
Sbjct: 257 SMNASTRLGTPVLLISYETFR------------IYAEILCKYEVG--MVICDEGHRLKNS 302
Query: 548 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 607
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG++ +F+ F+N I G
Sbjct: 303 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTAADFKRNFENCILRG 362
Query: 608 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 667
Q+ +ST ++ +++ L + + + R ++ K LP K VI KL+P+Q +LY
Sbjct: 363 QNADSTDKERDRALEKTQELIKLVDQCIIRRTNQILTKYLPVKFEMVICAKLTPIQLQLY 422
Query: 668 KRFLDLHGFTNDRV------SNEKIRKSFFAGYQALAQIWNHPGIL---QLTKDKGYPSR 718
FL +D+V EK + A L ++ +HP ++ +KG+
Sbjct: 423 TNFL-----KSDQVRRSLADCKEKASLTALADITTLKKLCSHPNLICEKIAAGEKGF--- 474
Query: 719 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 778
E+S + ++YN GE +N L GK +K LD+
Sbjct: 475 ---ENSQNILPINYNPK-GE----INPELSGK-------------------FKLLDFM-- 505
Query: 779 MVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGR 838
+ + ++ DK ++ S TLDL E L R K G + RLDG
Sbjct: 506 ------LAAIRAHGNDKVVLISNYTQTLDLFEL----LARKRKYG--------FVRLDGT 547
Query: 839 TESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDLQA 896
+R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D QA
Sbjct: 548 MSIKKRSKVVDRFNDP---ESDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQA 604
Query: 897 IYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQ-VHRTISKEEMLH 955
+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + + +++++
Sbjct: 605 MARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKD 664
Query: 956 LFEFGDD 962
LF F D
Sbjct: 665 LFSFDPD 671
>sp|Q9Y620|RA54B_HUMAN DNA repair and recombination protein RAD54B OS=Homo sapiens
GN=RAD54B PE=1 SV=1
Length = 910
Score = 249 bits (636), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 186/605 (30%), Positives = 299/605 (49%), Gaps = 97/605 (16%)
Query: 373 VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 432
V I + L+ HQ GI F++E ++ +R + G ILA MGLGKT Q I+ +
Sbjct: 286 VVIDPYLVYHLRPHQKEGIIFLYECVM-GMRM----NGRCGAILADEMGLGKTLQCISLI 340
Query: 433 YTAMRSVNLG----LRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAE 488
+T G ++ LIVTP ++++NWK+EF KW SE +++F V +D + E
Sbjct: 341 WTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSER--IKIFT---VDQDHKVE 395
Query: 489 LLAKWRAKGGVFLIGY-TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 547
K V +I Y R+L K++K D+L+CDE H +KN+
Sbjct: 396 EFIK-SIFYSVLIISYEMLLRSLDQIKNIKF---------------DLLICDEGHRLKNS 439
Query: 548 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 607
TT AL + C++RI LTG+P+QN+L E++ ++DFV G LGS +R ++ PI
Sbjct: 440 AIKTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILS 499
Query: 608 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 667
+ +++ E+ ++ +R+ L F+ R ++ K LPPK V+ + LQ LY
Sbjct: 500 REPSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELY 559
Query: 668 KRFLD-------LHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSRED 720
++ L+ L G + AL ++ NHP +L + S ++
Sbjct: 560 RKLLNSQVVRFCLQGLLEN--------SPHLICIGALKKLCNHPCLL-------FNSIKE 604
Query: 721 AEDSSS----DENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 776
E SS+ +E Y ++ P + N L F +K+ S
Sbjct: 605 KECSSTCDKNEEKSLYKGLLSVFPADYNPLL-------FTEKE----------------S 641
Query: 777 GKMVLLLDILTMCSNM--GDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 834
GK+ +L +L + + +K ++ S TL+++ Q + G + R
Sbjct: 642 GKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNIL------------QEVCKRHGYAYTR 689
Query: 835 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 894
LDG+T S+RQ++V+ FN + L+S++AG +G+NL + +I+ D WNP D+
Sbjct: 690 LDGQTPISQRQQIVDGFNSQ-HSSFFIFLLSSKAGGVGLNLIGGSHLILYDIDWNPATDI 748
Query: 895 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQV--HRTISKEE 952
QA+ R WR GQ PV YRL+ GT+EEKIY+RQ++K+GL VVD + H S EE
Sbjct: 749 QAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKTSEHIQFSVEE 808
Query: 953 MLHLF 957
+ +LF
Sbjct: 809 LKNLF 813
>sp|B4M9A8|RAD54_DROVI DNA repair and recombination protein RAD54-like OS=Drosophila
virilis GN=okr PE=3 SV=1
Length = 786
Score = 249 bits (635), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 181/606 (29%), Positives = 293/606 (48%), Gaps = 111/606 (18%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGL--GCILAHTMGLGKTFQVIAFLYTAM 436
+S L+ HQ G+RFM+E + G +G GCI+A MGLGKT Q + +T +
Sbjct: 145 LSNVLRPHQREGVRFMYECV--------EGKRGNFNGCIMADEMGLGKTLQCVTLTWTLL 196
Query: 437 RS---VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKW 493
R + A++V+P +++ NW++EF KW + L +E S++ L ++
Sbjct: 197 RQSPDCKPTISKAIVVSPSSLVKNWEKEFTKWLHGRMHCL---AMEGGSKEDTTRTLEQF 253
Query: 494 ------RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNT 547
R V LI Y FR S H+ +C + +++CDE H +KN+
Sbjct: 254 AMNTATRCGTPVLLISYETFRLYS---HI--------LC---KTEVGMVICDEGHRLKNS 299
Query: 548 RADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENG 607
T QAL +K +RR+ L+G+P+QN+L EY+ +V+FV LG+ +F+ F+N I G
Sbjct: 300 DNLTYQALMGLKTKRRVLLSGTPIQNDLTEYFSLVNFVNPEMLGTGSDFKRNFENAILRG 359
Query: 608 QHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLY 667
Q+ +ST + + +++ L + + R ++ K LP K V+ KL+ +Q +LY
Sbjct: 360 QNADSTDAERERALEKTQELVGLVNQCIIRRTNQILTKYLPVKFEMVVCAKLTAVQLQLY 419
Query: 668 KRFLDLHGFTNDRVS------NEKIRKSFFAGYQALAQIWNHPGILQ---LTKDKGYPSR 718
FL +D+V +K + A L ++ NHP ++ ++KG+
Sbjct: 420 TNFL-----KSDQVRRSLADCTDKTTLTALADITTLKKLCNHPDLIYEKIAAREKGF--- 471
Query: 719 EDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGK 778
EN + KP+++N L GK
Sbjct: 472 ---------ENSQNVLPPNYKPKDVNPELSGK---------------------------- 494
Query: 779 MVLLLDILTMC--SNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 836
+LLD + +N DK ++ S TLDL E +L R K+ + RLD
Sbjct: 495 -FMLLDFMLAAIRANSDDKVVLISNYTQTLDLFE----QLAR--------KRKYSYVRLD 541
Query: 837 GRTESSERQKLVERFNEPLNKRVKCTL--ISTRAGSLGINLHSANRVIIVDGSWNPTYDL 894
G +R K+V+RFN+P C L +S++AG G+NL ANR+ + D WNP D
Sbjct: 542 GTMTIKKRSKVVDRFNDPA---TDCFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDE 598
Query: 895 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ-QVHRTISKEEM 953
QA+ R WR GQ KP + YRL+A G++EEKI +RQ K+ L++ ++D + +++++
Sbjct: 599 QAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSSIIDNNDSAEKHFTRDDL 658
Query: 954 LHLFEF 959
LF F
Sbjct: 659 KDLFRF 664
>sp|Q9JIM3|RAD26_MOUSE Putative DNA repair and recombination protein RAD26-like OS=Mus
musculus GN=Rad26l PE=2 SV=2
Length = 699
Score = 246 bits (629), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 191/640 (29%), Positives = 287/640 (44%), Gaps = 123/640 (19%)
Query: 370 EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 429
E+ IP +I+ L+ +Q G +F++ + I+ G GCIL MGLGKT QVI
Sbjct: 109 EDGDSIPYTINRYLRDYQREGAQFLYRHYIE----------GRGCILGDDMGLGKTIQVI 158
Query: 430 AFLYTAM-----------------------RSVNLGLRTALIVTPVNVLHNWKQEFMKWR 466
+FL + + + + LIV P++VL+NWK E W
Sbjct: 159 SFLAAVLHKKGTREDIENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTW- 217
Query: 467 PSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC 526
RV +L +D ELL + K + L Y R + E
Sbjct: 218 ----GYFRVTVLHGSKKDN--ELLRLKQRKCEIALTTYETLR------------LCLEEL 259
Query: 527 HALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVR 586
++L+ ++ DEAH IKN +A T+ +K VKC+ RI LTG+ LQNN+ E +C++D+
Sbjct: 260 NSLEWSA--IIVDEAHRIKNPKARVTEVMKAVKCKVRIGLTGTVLQNNMKELWCVMDWAV 317
Query: 587 EGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKD 646
G LGS F+ +F +P+E+GQ +T ++ + H L +++ G+ R ++K
Sbjct: 318 PGLLGSRIHFKKQFSDPVEHGQRHTATKRELATGRKAMHRLAKKMSGWFLRRTKTLIKGQ 377
Query: 647 LPPKTVFVITVKLSPLQRRLYKRFLDLHGF------------------------TNDRVS 682
LP K ++ L+ Q+ +Y+ L+ TN R
Sbjct: 378 LPKKEDRMVYCSLTDFQKAVYQTVLETEDVALILTSSQPCTCGSGQKRRKCCYKTNSR-- 435
Query: 683 NEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRN 742
+ +R + L ++ NH +LQ A +S + +
Sbjct: 436 GDTVRTLCLSYLTVLQKVANHVALLQ------------AASTSKHQETVIKRICDRVFSR 483
Query: 743 MNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQS 802
DF+Q D F T + YSGKM +L +L DK L+FS S
Sbjct: 484 FPDFVQKSKDAAF------------ETLSDPKYSGKMKVLQQLLNHFRKQRDKVLLFSFS 531
Query: 803 IPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCT 862
LD+++ Y G D+ RLDG T+S ER K+V+ FN ++ V
Sbjct: 532 TKLLDVLQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--SQDVNIC 577
Query: 863 LISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEE 922
L+ST AG LG+N AN VI+ D +WNP DLQA+ RA+R GQ + V RL++ GT+EE
Sbjct: 578 LVSTMAGGLGLNFVGANVVILFDPTWNPANDLQAVDRAYRIGQCRDVKVLRLISLGTVEE 637
Query: 923 KIYKRQVTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 957
+Y RQV K+ L VV + R SKE LF
Sbjct: 638 IMYLRQVYKQQLHCVVVGSENAKRYFEAVQGSKEHRGELF 677
>sp|Q9UR24|RHP26_SCHPO DNA repair protein rhp26 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp26 PE=4 SV=1
Length = 973
Score = 246 bits (628), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 188/624 (30%), Positives = 296/624 (47%), Gaps = 119/624 (19%)
Query: 370 EEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVI 429
E IP I L +QV ++++WE Q G I+ MGLGKT Q++
Sbjct: 264 EGGFTIPGDIRPHLFRYQVTCVQWLWELYCQEA----------GGIIGDEMGLGKTIQIV 313
Query: 430 AFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFML------EDVSR 483
+FL + S + ALIV P ++ W EF W PLRV +L + SR
Sbjct: 314 SFLSSLHHSGKFQ-KPALIVCPATLMKQWVNEFHTW----WAPLRVVVLHATGSGQRASR 368
Query: 484 DRR-----AELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREIC----------HA 528
++R A +K + L G ++ SF ++ K N+ +
Sbjct: 369 EKRQYESDASESEAEESKTSIKLRGASS----SFHRYAK--NLVESVFTRGHILITTYAG 422
Query: 529 LQDGPDIL--------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYC 580
L+ D++ V DE H I+N ++ + + KQ++ RI L+G+P+QNNL E +
Sbjct: 423 LRIYGDLILPREWGYCVLDEGHKIRNPDSEISISCKQIRTVNRIILSGTPIQNNLTELWN 482
Query: 581 MVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFV-QRMD 639
+ DFV G LG+ F+N+F PI G + N+++ V+ + + +L + + ++ +RM
Sbjct: 483 LFDFVFPGRLGTLPVFQNQFALPINIGGYANASNVQVQTAYKCACMLRDLISPYLLRRMK 542
Query: 640 MNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQ 699
++V DLP K+ V+ KL+PLQR+ Y+ FL G ++ N K + G L +
Sbjct: 543 LDVAA-DLPKKSEQVLFCKLTPLQRKAYQDFL--QGSDMQKILNGK--RQMLYGIDILRK 597
Query: 700 IWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKD 759
I NHP ++ +RE +L K D
Sbjct: 598 ICNHPDLV---------TRE--------------------------YLLHKED------- 615
Query: 760 WWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRP 819
+ Y + + SGK+ ++ +LT+ G ++L+FSQ+ LD++E L LP
Sbjct: 616 --------YNYGDPEKSGKLKVIRALLTLWKKQGHRTLLFSQTRQMLDILEIGLKDLP-- 665
Query: 820 GKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSAN 879
+ R+DG T + RQ LV+ FN+ N+ L++TR G LG+NL A+
Sbjct: 666 ---------DVHYCRMDGSTSIALRQDLVDNFNK--NEYFDVFLLTTRVGGLGVNLTGAD 714
Query: 880 RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 939
RVI+ D WNP+ D QA RAWR GQ K V YRLM GT+EEKIY RQ+ K+ L +++
Sbjct: 715 RVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYHRQIFKQFLTNKIL 774
Query: 940 DRQQVHRTISKEEMLHLFEFGDDE 963
+ R ++ LF GD++
Sbjct: 775 KDPKQRRFFKMTDLHDLFTLGDNK 798
>sp|Q5T890|RAD26_HUMAN Putative DNA repair and recombination protein RAD26-like OS=Homo
sapiens GN=RAD26L PE=1 SV=1
Length = 712
Score = 243 bits (621), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 187/634 (29%), Positives = 284/634 (44%), Gaps = 120/634 (18%)
Query: 375 IPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 434
IP +I+ L+ +Q G RF++ + I G GCIL MGLGKT QVI+FL
Sbjct: 126 IPYTINRYLRDYQREGTRFLYGHYIH----------GGGCILGDDMGLGKTVQVISFLAA 175
Query: 435 AM------------------RSV------NLGLRTALIVTPVNVLHNWKQEFMKWRPSEL 470
+ RS+ + + LIV P++VL+NWK E W
Sbjct: 176 VLHKKGTREDIENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTW----- 230
Query: 471 KPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQ 530
RV +L +D EL+ + K + L Y R + + ++L+
Sbjct: 231 GYFRVTVLHGNRKDN--ELIRVKQRKCEIALTTYETLR------------LCLDELNSLE 276
Query: 531 DGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFL 590
++ DEAH IKN +A T+ +K +KC RI LTG+ LQNN+ E +C++D+ G L
Sbjct: 277 WSA--VIVDEAHRIKNPKARVTEVMKALKCNVRIGLTGTILQNNMKELWCVMDWAVPGLL 334
Query: 591 GSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPK 650
GS F+ +F +P+E+GQ +T ++ + L +++ G+ R ++K LP K
Sbjct: 335 GSGTYFKKQFSDPVEHGQRHTATKRELATGRKAMQRLAKKMSGWFLRRTKTLIKDQLPKK 394
Query: 651 TVFVITVKLSPLQRRLYKRFLDLHGFT----------------------NDRVSNEKIRK 688
++ L+ Q+ +Y+ L+ T E ++
Sbjct: 395 EDRMVYCSLTDFQKAVYQTVLETEDVTLILQSSEPCTCRSGQKRRNCCYKTNSHGETVKT 454
Query: 689 SFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQ 748
+ + L ++ NH +LQ A +S + + + DF+Q
Sbjct: 455 LYLSYLTVLQKVANHVALLQ------------AASTSKQQETLIKRICDQVFSRFPDFVQ 502
Query: 749 GKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDL 808
D F T + YSGKM +L +L C DK L+FS S LD+
Sbjct: 503 KSKDAAF------------ETLSDPKYSGKMKVLQQLLNHCRKNRDKVLLFSFSTKLLDV 550
Query: 809 IEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRA 868
++ Y G D+ RLDG T+S ER K+V+ FN + V L+ST A
Sbjct: 551 LQQY------------CMASGLDYRRLDGSTKSEERLKIVKEFNS--TQDVNICLVSTMA 596
Query: 869 GSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQ 928
G LG+N AN V++ D +WNP DLQAI RA+R GQ + V RL++ GT+EE +Y RQ
Sbjct: 597 GGLGLNFVGANVVVLFDPTWNPANDLQAIDRAYRIGQCRDVKVLRLISLGTVEEIMYLRQ 656
Query: 929 VTKEGLAARVVDRQQVHRTI-----SKEEMLHLF 957
+ K+ L VV + R SKE LF
Sbjct: 657 IYKQQLHCVVVGSENAKRYFEAVQGSKEHQGELF 690
>sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX homolog OS=Caenorhabditis elegans
GN=xnp-1 PE=1 SV=1
Length = 1359
Score = 241 bits (614), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 162/451 (35%), Positives = 242/451 (53%), Gaps = 31/451 (6%)
Query: 297 ILDDAELGEETKRKIAIEKERQERLKSLQVQFSSKSKLMNSVTLDGDLSAGASIEVLGDA 356
I+D ++L +ET EKER++RL+ Q +F+ L L L+ +S L
Sbjct: 378 IMDSSKLQKETIDAERAEKERRKRLEKKQKEFNGIV-LEEGEDLTEMLTGTSSQRKLKSV 436
Query: 357 ITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCIL 416
+ + V E+ ++ V + +S+ LK HQ GI+FM++ +S+ ++ + +G G IL
Sbjct: 437 VLDPDSSTVDEESKKPVEVHNSLVRILKPHQAHGIQFMYDCACESLDRLDT--EGSGGIL 494
Query: 417 AHTMGLGKTFQVIAFLYTAMRSVNLG--LRTALIVTPVNVLHNWKQEFMKW---RPSELK 471
AH MGLGKT QVI FL+T + +G + L+V P NV+ NW +EF KW EL
Sbjct: 495 AHCMGLGKTLQVITFLHTVLMHEKIGEKCKRVLVVVPKNVIINWFKEFQKWLVDNDEELD 554
Query: 472 PLRVFMLEDVS--RDRRAELLAKWRAKG-GVFLIGYTAFRNLSFGKHVKD---------- 518
+ V L+ DRR L A +K V +IGY FR L+ K
Sbjct: 555 TIDVNELDSYKTIEDRRRALKAWHSSKTPSVMIIGYDLFRILTVEDDPKKKKPKNRNRRL 614
Query: 519 RNMAREICHALQD-GPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLME 577
+ LQ+ GPD++VCDEAH +KN + ++ + ++ +RRI LTG+PLQNNLME
Sbjct: 615 EKAKEDFRKYLQNPGPDMVVCDEAHKLKNDDSALSKCMVKILTKRRICLTGTPLQNNLME 674
Query: 578 YYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQR 637
Y+CMV+FV+ G LG+ EF NRF N I G+ +++ +V M +R H+LY+ LK V R
Sbjct: 675 YHCMVNFVKPGLLGTKTEFANRFVNIINRGRTKDASPLEVSFMKRRCHVLYDHLKKCVDR 734
Query: 638 MDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQAL 697
D V+ + +PPK +VI V+ + Q LY FL ND V + + K Y
Sbjct: 735 KDYRVLTEAIPPKQEYVINVRQTERQCALYNAFL------NDIVGDSGLSKRLLPDYHMF 788
Query: 698 AQIWNHPGILQLTK---DKGYPSREDAEDSS 725
++IW HP L L + ++ REDAE+ +
Sbjct: 789 SRIWTHPYQLVLHEQRMERERVMREDAEEEA 819
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 167/298 (56%), Gaps = 38/298 (12%)
Query: 764 LLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLS--------- 814
L+ E + S K++LL++I+ C +GDK LVFSQS+ +L LI+ L
Sbjct: 934 LVKEEDRDDFALSNKLILLVEIIKKCEEIGDKLLVFSQSLESLTLIKRMLEYMAGTGQWF 993
Query: 815 -----KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 869
L G++ W +G+D+ +DG +S +R + FN+PLN R + LISTRAG
Sbjct: 994 ADGHEALNAEGEETWSWLEGEDYMTIDGSVQSGKRDAVQTSFNDPLNLRARLMLISTRAG 1053
Query: 870 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 929
SLG N+ +ANRVII D WNP++D Q+++R +R+GQTKPV+ YR +A GTMEE+IYKRQV
Sbjct: 1054 SLGTNMVAANRVIIFDACWNPSHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQV 1113
Query: 930 TKEGLAARVVDRQQVHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKH 989
TKE + RVVD Q+ R ++ L++F DP +S CA
Sbjct: 1114 TKESTSMRVVDEAQIQRHYLGNDLTELYQFT-PSTFDPDVEIS------------CA--- 1157
Query: 990 KLPLSHEGCSDKLMESLLGKHHPRWISNYHEHETLLQENEEERLSKEEQDMAWEVFRK 1047
D+L+ ++ K+ + +Y EH+TL E+E+L+++E AW + K
Sbjct: 1158 -------PPKDRLLADVIHKNQ-HAVVDYIEHDTLFANVEDEKLTEQEMKDAWTDYEK 1207
>sp|P32863|RAD54_YEAST DNA repair and recombination protein RAD54 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAD54 PE=1
SV=1
Length = 898
Score = 234 bits (596), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 203/690 (29%), Positives = 320/690 (46%), Gaps = 120/690 (17%)
Query: 290 QKKKIRRILDDAELGEETKRKIAIEKERQERLKSLQVQFSSK-SKLMNSVTLDGDLSAGA 348
+ K +R +L D+E E K+K A S+ V K +K++ ++G
Sbjct: 235 RNKPLRELLGDSENSAENKKKFA----------SVPVVIDPKLAKILRPHQVEG------ 278
Query: 349 SIEVLGDAITGYIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSG 408
+ L +TG +V + EA +S LK+ E + +K +
Sbjct: 279 -VRFLYRCVTG----LVMKDYLEAEAFNTSSEDPLKSD---------EKALTESQKTEQN 324
Query: 409 DKG-LGCILAHTMGLGKTFQVIAFLYTAMRSVNLGLR---TALIVTPVNVLHNWKQEFMK 464
++G GCI+A MGLGKT Q IA ++T +R G R +IV P ++++NW E +K
Sbjct: 325 NRGAYGCIMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIK 384
Query: 465 WR-PSELKPLRVFMLEDV---SRDRRAELLAKWRAKGG------VFLIGY-TAFRNLSFG 513
W P+ L PL V + ++ + W G V +I Y T RN+
Sbjct: 385 WLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVD-- 442
Query: 514 KHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQN 573
+K+ N+ +++ DE H +KN + T AL + C RR+ L+G+P+QN
Sbjct: 443 -QLKNCNVG------------LMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQN 489
Query: 574 NLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKG 633
+L EY+ ++ F G LGS EFR F+NPI G+ ++T +++ + L +
Sbjct: 490 DLSEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSK 549
Query: 634 FVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL---DLHGFTNDRVSNEKIRKSF 690
F+ R +++ K LP K VI V L PLQ LY + + ++ ++ +R
Sbjct: 550 FIIRRTNDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQPLR--- 606
Query: 691 FAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGK 750
L ++ NHP +L + ++ + DYN+ G K R++
Sbjct: 607 --AIGILKKLCNHPNLLNFEDEF-------DDEDDLELPDDYNMP-GSKARDV------- 649
Query: 751 NDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDIL-TMCSNMGDKSLVFSQSIPTLDLI 809
+ YS K +L L + + DK ++ S TLDLI
Sbjct: 650 ---------------------QTKYSAKFSILERFLHKIKTESDDKIVLISNYTQTLDLI 688
Query: 810 EFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAG 869
E K+ R K RLDG ++RQKLV+RFN+P + L+S++AG
Sbjct: 689 E----KMCR--------YKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEF-IFLLSSKAG 735
Query: 870 SLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQV 929
GINL ANR+I++D WNP D QA+ R WR GQ K F YR ++ GT+EEKI++RQ
Sbjct: 736 GCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQS 795
Query: 930 TKEGLAARVVD-RQQVHRTISKEEMLHLFE 958
K L++ VVD ++ V R S + + LF+
Sbjct: 796 MKMSLSSCVVDAKEDVERLFSSDNLRQLFQ 825
>sp|Q09772|RDH54_SCHPO Meiotic recombination protein rdh54 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rdh54 PE=1 SV=3
Length = 811
Score = 231 bits (589), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 177/604 (29%), Positives = 284/604 (47%), Gaps = 103/604 (17%)
Query: 373 VRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFL 432
V I +S L +HQ G+ F+++ ++ G G ILA MGLGKT Q I +
Sbjct: 195 VVIDPFLSKHLYSHQREGVSFLYDCLLG-----MEGKCGYSAILADEMGLGKTLQTITVV 249
Query: 433 YTAMRSVNLGLRT-----ALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRA 487
+T ++ R+ A++V PV +L NW+ EF W E + V++ R A
Sbjct: 250 WTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLGHE--RIHVYI------ARCA 301
Query: 488 ELLAKWRAKG--GVFLIGY----TAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEA 541
E ++ + + + GY T RN G + D+L+CDEA
Sbjct: 302 EDFQEFTSNKTYSIIITGYETVCTYLRNYGCGIDI-----------------DLLICDEA 344
Query: 542 HMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQ 601
H +K+ + T L ++K ++R+ LTG+PLQN+L EY+ MV+F+ G LG+ + F+ +++
Sbjct: 345 HRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNSFKAQYE 404
Query: 602 NPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSP 661
PI + N++S D+ + R L+E F R N++ K LPP+T V+ +K +
Sbjct: 405 RPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVLFIKPTH 464
Query: 662 LQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDA 721
Q +Y LD GF S+ + + L++I N +L R +
Sbjct: 465 QQENVYGHVLD--GFK----SSVDQKGYYLKILTRLSKICNSTILL----------RNEK 508
Query: 722 EDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVL 781
E+ S E D +V F+++ N LL S K+ +
Sbjct: 509 ENFLSTELQDKHV---------------------FEQE--NMLLS---------SSKLQI 536
Query: 782 LLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTES 841
L +L K+++ SQ TL+LIE +LS L + +L G T
Sbjct: 537 LAALLKSFQRGCQKAVIVSQYKETLELIELFLSIL------------HVRFCKLLGSTPF 584
Query: 842 SERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAW 901
SER +V FN K L+S++AG G+NL + R+II + SWNP DLQA+ R +
Sbjct: 585 SERDLIVHNFNTSSFKEFSVLLLSSKAGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIY 644
Query: 902 RYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR--QQVHRTISKEEMLHLFEF 959
R GQ +PV Y ++ G ++E+I+ RQ TK+GL++ +D Q + E++ LF +
Sbjct: 645 RSGQKRPVCIYTFLSSGMLDERIFIRQNTKQGLSSSFIDSDASQKKNFFTGEDIKTLFSY 704
Query: 960 GDDE 963
E
Sbjct: 705 SKTE 708
>sp|A2BGR3|ERC6L_DANRE DNA excision repair protein ERCC-6-like OS=Danio rerio GN=ercc6l PE=1
SV=1
Length = 1451
Score = 230 bits (587), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 200/695 (28%), Positives = 317/695 (45%), Gaps = 122/695 (17%)
Query: 382 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 441
KL HQ G+ F++ ++ + RK G ILA MGLGKT QVI+FL + M L
Sbjct: 104 KLYDHQKEGVAFLY-SLYRDGRK--------GGILADDMGLGKTIQVISFL-SGMYDAEL 153
Query: 442 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 501
T L+V P +++ NW +EF KW P +RV S+ R L + + KGGV +
Sbjct: 154 ANHT-LLVMPTSLIKNWVREFAKWTPG----MRVKEFHGSSKTERNRNLERIQRKGGVII 208
Query: 502 IGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 561
Y N N RE D ++ DEAH IK + T ++ + +
Sbjct: 209 TTYQMLIN---NYEQLGSNGHREFKW------DYVILDEAHKIKTSSTKTAKSAHAIPAK 259
Query: 562 RRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 620
R+ LTG+P+QNNL E + + DF +G LG+S F+ ++NPI + ++T + +
Sbjct: 260 NRVLLTGTPVQNNLREMWALFDFACQGSLLGTSKTFKTEYENPITRAREKDATPGEKALG 319
Query: 621 NQRSHILYEQLKG-FVQRMDMNVVKK----------------------------DLPPKT 651
+ S L + +K F++R +V +K L K
Sbjct: 320 LRISQNLTDIIKPYFLRRTKADVQQKKLKLEEGFEEEEDQENKCPNAREGVEMPSLTRKN 379
Query: 652 VFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHP------G 705
++ LS +Q +Y +F+ L + +S A L ++ +HP
Sbjct: 380 DLIVWTYLSSVQEDIYNKFISLDQIKELLTTT----RSPLAELTVLKKLCDHPRLLSQRA 435
Query: 706 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 765
++QL ++G D+E SDE+ I D +
Sbjct: 436 VIQLGLERG----SDSELVHSDESESAVSQI--------------------------DNI 465
Query: 766 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 825
+HT ++ SGK+ ++ ++ G ++L+FSQS LD++E L
Sbjct: 466 SDHTL--IEESGKLQFVVSLMECLREEGHRTLIFSQSRKMLDIMERVLRN---------- 513
Query: 826 WKKGKDWYRLDGR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIV 884
+ RLDG T+ +ER+K + F +KR L++T+ G +GI L ANRV+I
Sbjct: 514 --RNFRLLRLDGTVTQLAEREKRISLFQ--TDKRYTIFLLTTQVGGVGITLTGANRVVIF 569
Query: 885 DGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQ 943
D SWNP D QA+ RA+R GQT+ V YRL+ GT+EEKIY+RQV K+ L + D++
Sbjct: 570 DPSWNPATDAQAVDRAYRIGQTENVIIYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKN 629
Query: 944 VHRTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHE----GCS 999
R SK+E+ LF+ D + + + Q S+ ++ +L H + H G S
Sbjct: 630 PFRYFSKQELRELFKLEDTRSSSTQQQLQAMHAQ--SRRSDTSLDHHIARLHSMEMFGIS 687
Query: 1000 D-KLM---ESLLGKHHPRWISNYHEHETLLQENEE 1030
D LM E + P ++H +T +Q+ +E
Sbjct: 688 DHDLMFTKEPAADEDDPEDAESHHYIQTRVQKAQE 722
>sp|P40352|RAD26_YEAST DNA repair and recombination protein RAD26 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RAD26 PE=1
SV=1
Length = 1085
Score = 226 bits (577), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 186/630 (29%), Positives = 282/630 (44%), Gaps = 114/630 (18%)
Query: 363 NVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGL 422
N+ K +IP I + L +Q +++++E Q+ G I+ MGL
Sbjct: 277 NIPDAKLNSQFKIPGEIYSLLFNYQKTCVQWLYELYQQNC----------GGIIGDEMGL 326
Query: 423 GKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVS 482
GKT QVIAF+ A+ L LIV P V+ W EF W P PLR +L +
Sbjct: 327 GKTIQVIAFI-AALHHSGLLTGPVLIVCPATVMKQWCNEFQHWWP----PLRTVILHSMG 381
Query: 483 RDRRAELLAKWRAKGGVFLI--------GYTAFRNLSFGKHVKDR--NMAREICHALQDG 532
++ K LI Y ++N + K + ++ + I + DG
Sbjct: 382 SGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDG 441
Query: 533 PDIL---------------------VCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPL 571
++ V DE H I+N ++ + K++K RI L+G+P+
Sbjct: 442 HILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPI 501
Query: 572 QNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQL 631
QNNL E + + DF+ G LG+ F+ +F PI G + N+T+ V+ + + L + +
Sbjct: 502 QNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLI 561
Query: 632 KGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFF 691
++ R V KDLP K V+ KL+ QR Y FL H +++ N K ++
Sbjct: 562 SPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFL--HSSDLNQIQNGK--RNVL 617
Query: 692 AGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKN 751
G L +I NHP + L +D + N DY G+ R
Sbjct: 618 FGIDILRKICNHPDL--LDRD------------TKRHNPDY----GDPKR---------- 649
Query: 752 DDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEF 811
SGKM ++ +L + G K+L+F+QS LD++E
Sbjct: 650 ------------------------SGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEE 685
Query: 812 YLS-KLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGS 870
++S K P ++ R+DG T RQ LV+RFN N+ L++TR G
Sbjct: 686 FISTKDPDLSHL--------NYLRMDGTTNIKGRQSLVDRFN---NESFDVFLLTTRVGG 734
Query: 871 LGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVT 930
LG+NL ANR+II D WNP+ D+QA RAWR GQ + V YRLM G++EEKIY RQ+
Sbjct: 735 LGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIF 794
Query: 931 KEGLAARVVDRQQVHRTISKEEMLHLFEFG 960
K+ L R++ + R E+ LF G
Sbjct: 795 KQFLTNRILTDPKQKRFFKIHELHDLFSLG 824
>sp|Q8BHK9|ERC6L_MOUSE DNA excision repair protein ERCC-6-like OS=Mus musculus GN=Ercc6l
PE=1 SV=1
Length = 1240
Score = 223 bits (568), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 181/608 (29%), Positives = 286/608 (47%), Gaps = 96/608 (15%)
Query: 382 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 441
KL HQ GI F++ K G KG ILA MGLGKT Q+IAFL + M +L
Sbjct: 96 KLFEHQKEGIAFLYS-------LYKDGRKG--GILADDMGLGKTVQIIAFL-SGMFDASL 145
Query: 442 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 501
+ L++ P N+++ W EF KW P +RV S+ R L + + + GV +
Sbjct: 146 -VNHVLLIMPTNLINTWVNEFAKWTPG----MRVKTFHGSSKSERTRSLTRIQQRNGVVI 200
Query: 502 IGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 561
Y L+ + + N + D ++ DEAH IK+ + + +
Sbjct: 201 TTYQML--LNNWQQLASFNGQAFVW-------DYVILDEAHKIKSASTKSAVCARAIPAS 251
Query: 562 RRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 620
R+ LTG+P+QNNL E + + DF +G LG+ F+ +++PI + ++T + +
Sbjct: 252 NRLLLTGTPVQNNLQELWSLFDFACQGSLLGTLKTFKMEYEHPIIRAREKDATPGEKALG 311
Query: 621 NQRSHILYEQLKGFVQRM---DMNVVKKDLPP---------------------KTVFVIT 656
+ S L E +K + R ++ K D P K ++
Sbjct: 312 LKISENLMEIIKPYFLRRTKEEVQTKKADNPEARLGEKNPAGEAICDMFSLARKNDLIVW 371
Query: 657 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIR-KSFFAGYQALAQIWNHPGILQLTKDKGY 715
++L PLQ +Y++F+ L D + + +S A L ++ +HP +L +
Sbjct: 372 IRLLPLQEEIYRKFVSL-----DHIKELLMETRSPLAELGVLKKLCDHPRLLSARACRLL 426
Query: 716 PSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDY 775
+ A S+ DEN +V NMN D L + T +
Sbjct: 427 -NLGTATFSAQDENEQEDV------SNMNSI----------------DHLPDKTL--IQE 461
Query: 776 SGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRL 835
SGKM+ L+ +L + G ++LVFSQSI L++IE L + K +K R+
Sbjct: 462 SGKMIFLMSLLERLQDEGHQTLVFSQSIKILNIIERLL--------KNKHFKT----LRI 509
Query: 836 DGR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 894
DG T ER+K ++ F + NK L++T+ G +G+ L +A RV+I D SWNP D
Sbjct: 510 DGTVTHLWEREKRIQLFQQ--NKEYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNPATDA 567
Query: 895 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTISKEEM 953
QA+ R +R GQ + V YRL+ GT+EEKIY+RQV K+ L + +++ R +K+E+
Sbjct: 568 QAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFTKQEL 627
Query: 954 LHLFEFGD 961
LF GD
Sbjct: 628 KELFTVGD 635
>sp|Q2NKX8|ERC6L_HUMAN DNA excision repair protein ERCC-6-like OS=Homo sapiens GN=ERCC6L
PE=1 SV=1
Length = 1250
Score = 222 bits (565), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 177/615 (28%), Positives = 286/615 (46%), Gaps = 106/615 (17%)
Query: 382 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 441
+L HQ GI F++ ++ + RK G ILA MGLGKT Q+IAFL + M +L
Sbjct: 95 QLFEHQKEGIAFLY-SLYRDGRK--------GGILADDMGLGKTVQIIAFL-SGMFDASL 144
Query: 442 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 501
+ L++ P N+++ W +EF+KW P +RV S+D R L + + + GV +
Sbjct: 145 -VNHVLLIMPTNLINTWVKEFIKWTPG----MRVKTFHGPSKDERTRNLNRIQQRNGVII 199
Query: 502 IGYTAFRNLSFGKHVKDRNMAREICHALQDGP-DILVCDEAHMIKNTRADTTQALKQVKC 560
Y N N + Q+ D ++ DEAH IK + + + +
Sbjct: 200 TTYQMLIN----------NWQQLSSFRGQEFVWDYVILDEAHKIKTSSTKSAICARAIPA 249
Query: 561 QRRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKI 619
R+ LTG+P+QNNL E + + DF +G LG+ F+ ++NPI + ++T + +
Sbjct: 250 SNRLLLTGTPIQNNLQELWSLFDFACQGSLLGTLKTFKMEYENPITRAREKDATPGEKAL 309
Query: 620 MNQRSHILYEQLKG-FVQRMDMNVVKK-----------------------DLPPKTVFVI 655
+ S L +K F++R +V KK L K +I
Sbjct: 310 GFKISENLMAIIKPYFLRRTKEDVQKKKSSNPEARLNEKNPDVDAICEMPSLSRKNDLII 369
Query: 656 TVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTK---- 711
++L PLQ +Y++F+ L + +S A L ++ +HP +L
Sbjct: 370 WIRLVPLQEEIYRKFVSLDHIKELLMET----RSPLAELGVLKKLCDHPRLLSARACCLL 425
Query: 712 DKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYK 771
+ G S +D + ++D+ + DD ++
Sbjct: 426 NLGTFSAQDGNEGEDSPDVDH--------------IDQVTDDTLMEE------------- 458
Query: 772 ELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKD 831
SGKM+ L+D+L + G ++LVFSQS L++IE L + + +K
Sbjct: 459 ----SGKMIFLMDLLKRLRDEGHQTLVFSQSRQILNIIERLL--------KNRHFKT--- 503
Query: 832 WYRLDGR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNP 890
R+DG T ER+K + F + NK L++T+ G +G+ L +A RV+I D SWNP
Sbjct: 504 -LRIDGTVTHLLEREKRINLFQQ--NKDYSVFLLTTQVGGVGLTLTAATRVVIFDPSWNP 560
Query: 891 TYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTIS 949
D QA+ R +R GQ + V YRL+ GT+EEKIY+RQV K+ L + +++ R S
Sbjct: 561 ATDAQAVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGEKKNPFRYFS 620
Query: 950 KEEMLHLFEFGDDEN 964
K+E+ LF D +N
Sbjct: 621 KQELRELFTIEDLQN 635
>sp|A6QQR4|ERC6L_BOVIN DNA excision repair protein ERCC-6-like OS=Bos taurus GN=ERCC6L
PE=2 SV=1
Length = 1242
Score = 220 bits (560), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 180/610 (29%), Positives = 289/610 (47%), Gaps = 94/610 (15%)
Query: 382 KLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRSVNL 441
+L +Q GI F++ S+ + D G ILA MGLGKT Q+IAFL + M +L
Sbjct: 95 QLYEYQKEGIAFLY-----SLYR----DGRRGGILADDMGLGKTVQIIAFL-SGMFDASL 144
Query: 442 GLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGGVFL 501
+ L++ P +++ W +EF+KW P +RV S+D R L + + + GV +
Sbjct: 145 -VNHVLLIMPTSLISTWLREFVKWTPG----MRVKTFHGPSKDERTRNLCRIQQRNGVII 199
Query: 502 IGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQ 561
Y N + + N + D ++ DEAH IK++ + + +
Sbjct: 200 TTYQMLIN--NWQQLSSLNGQEFLW-------DYVILDEAHKIKSSSTKSAICARAIPAS 250
Query: 562 RRIALTGSPLQNNLMEYYCMVDFVREG-FLGSSHEFRNRFQNPIENGQHTNSTSEDVKIM 620
RI LTG+P+QNNL E + + DF +G LG+ F+ ++NPI + ++T + +
Sbjct: 251 NRILLTGTPIQNNLQELWSLFDFACQGSLLGTLRTFKMEYENPITRAREKDATPGEKALG 310
Query: 621 NQRSHILYEQLKG-FVQRMDMNVVKK-----------------------DLPPKTVFVIT 656
+ S L +K F++R V KK L K +I
Sbjct: 311 FKISENLMAIIKPYFLRRTKEEVQKKKSSNPEVQLSEKSPDVGAICEMPSLSRKNDLIIW 370
Query: 657 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYP 716
++L PLQ +Y++F+ L + +S A L ++ +HP +L + G
Sbjct: 371 IRLVPLQEEIYRKFVSLDHIKELLMET----RSPLAELGVLKKLCDHPRLLS-ARACGLL 425
Query: 717 SREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYS 776
+ A+ S DE + GE ++ D + +DD ++ S
Sbjct: 426 NLGAAKFSVQDE------IEGEDSSDV-DHIDQISDDTLMEE-----------------S 461
Query: 777 GKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLD 836
GKM+ L+D+L + G ++LVFSQS L++IE L + K+ R+D
Sbjct: 462 GKMLFLMDLLKKLRDEGHQTLVFSQSRRILNIIERLLK-----NRHFKIL-------RID 509
Query: 837 GR-TESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQ 895
G T ER+K + F + NK L++T+ G +G+ L +A+RV+I D SWNP D Q
Sbjct: 510 GTITHLVEREKRISLFQQ--NKDYSVFLLTTQVGGVGLTLTAASRVVIFDPSWNPATDAQ 567
Query: 896 AIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV-DRQQVHRTISKEEML 954
A+ R +R GQ + V YRL+ GT+EEKIY+RQV K+ L + D++ R SK+E+
Sbjct: 568 AVDRVYRIGQKENVVVYRLITCGTVEEKIYRRQVFKDSLIRQTTGDKKNPFRYFSKQELR 627
Query: 955 HLFEFGDDEN 964
LF D +N
Sbjct: 628 ELFTIEDFQN 637
>sp|P32333|MOT1_YEAST TATA-binding protein-associated factor MOT1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MOT1 PE=1 SV=1
Length = 1867
Score = 202 bits (515), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 177/678 (26%), Positives = 298/678 (43%), Gaps = 85/678 (12%)
Query: 360 YIVNVVREKGEEAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHT 419
+I ++ + ++P +I A L+ +Q G+ W + L IL
Sbjct: 1249 FIQQMMDPSKAKPFKLPIAIKATLRKYQQDGVN--WLAFLNKYH--------LHGILCDD 1298
Query: 420 MGLGKTFQVIAFL----------YTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSE 469
MGLGKT Q I + Y RSV +LI+ P ++ +W+ EF ++ P
Sbjct: 1299 MGLGKTLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPF- 1357
Query: 470 LKPLRVFMLEDVSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHAL 529
L+V + R L + + + Y RN ++
Sbjct: 1358 ---LKVVVYAGGPTVRLT--LRPQLSDADIIVTSYDVARN--------------DLAVLN 1398
Query: 530 QDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGF 589
+ + V DE H+IKN+++ +A+K++ R+ LTG+P+QNN++E + + DF+ GF
Sbjct: 1399 KTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGF 1458
Query: 590 LGSSHEFRNRFQNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPP 649
LG+ F+ RF PI +++ ++S++ + L++Q+ F+ R V DLPP
Sbjct: 1459 LGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPP 1518
Query: 650 KTVFVITVKLSPLQRRLYKRFLDLH-GFTNDRVSNEKI---RKSFFAGYQALAQIWNHPG 705
K + +L LQ++LY F + N +I ++ F Q + ++ NHP
Sbjct: 1519 KIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPA 1578
Query: 706 ILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLL 765
L +P +D +D + +I + LL
Sbjct: 1579 ---LVLSPNHPQLAQVQDYLKQTGLDLHDIINAP-----------------KLSALRTLL 1618
Query: 766 HEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKL 825
E E D K + ++L+F Q LD++E L K P
Sbjct: 1619 FECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVT--- 1675
Query: 826 WKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVD 885
+ RLDG + +RQK+V +FNE + + C L++T+ G LG+NL A+ VI V+
Sbjct: 1676 ------YMRLDGSIDPRDRQKVVRKFNE--DPSIDCLLLTTKVGGLGLNLTGADTVIFVE 1727
Query: 886 GSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVH 945
WNP DLQA+ RA R GQ K V YR++ GT+EEKI Q K +A+ VV++Q
Sbjct: 1728 HDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVNQQNSG 1787
Query: 946 -RTISKEEMLHLFEFGDDENPDPLTAVSKENGQGSSQNTNCALKHKLPLSHEGCSDKLME 1004
++ ++L LF DP S++N + ++ ++ A + + G + K E
Sbjct: 1788 LASMDTHQLLDLF--------DPDNVTSQDNEEKNNGDSQAAKGMEDIANETGLTGKAKE 1839
Query: 1005 SLLGKHHPRWISNYHEHE 1022
+ LG+ W + +E E
Sbjct: 1840 A-LGELKELWDPSQYEEE 1856
>sp|B3LN76|RDH54_YEAS1 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain RM11-1a) GN=RDH54 PE=3 SV=1
Length = 924
Score = 202 bits (515), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 171/627 (27%), Positives = 275/627 (43%), Gaps = 126/627 (20%)
Query: 383 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 427
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 428 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 472
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 473 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 525
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 526 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 585
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 586 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 643
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 544
Query: 644 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGYQALAQIWNH 703
+K LPPKT ++ K Q +K L R++ S L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQGARLDFGRLT----FSSSLGLITLLKKVCNS 600
Query: 704 PGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWND 763
PG+ +G P + K D
Sbjct: 601 PGL-----------------------------VGSDP---------------YYKSHIKD 616
Query: 764 LLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQ 822
+ +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 617 TQSQDSYSRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN-------- 668
Query: 823 GKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVI 882
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+I
Sbjct: 669 ----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRLI 722
Query: 883 IVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQ 942
+ D WNP+ DLQA+ R R GQ KP F YRL+ G ++EKI +RQ+ K L+ + +
Sbjct: 723 LFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDS 782
Query: 943 QVHR-------TISKEEMLHLFEFGDD 962
++ +KE++ LF D
Sbjct: 783 EMRNKESSNDDLFNKEDLKDLFSVHTD 809
>sp|C7GQI8|RDH54_YEAS2 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain JAY291) GN=RDH54 PE=3 SV=1
Length = 924
Score = 202 bits (515), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 173/628 (27%), Positives = 277/628 (44%), Gaps = 128/628 (20%)
Query: 383 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 427
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 428 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 472
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 473 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 525
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 526 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 585
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 586 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 643
G LGS F+ RF PI + T + E +K +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLKKGEERSKEMIEITKRFILRRTNAIL 544
Query: 644 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 702
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 599
Query: 703 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 762
PG+ +G P + K
Sbjct: 600 SPGL-----------------------------VGSDP---------------YYKSHIK 615
Query: 763 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 821
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 616 DTQSQDSYSRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 668
Query: 822 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 881
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 669 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 721
Query: 882 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 941
I+ D WNP+ DLQA+ R R GQ KP F YRL+ G ++EKI +RQ+ K L+ + +
Sbjct: 722 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781
Query: 942 QQVHR-------TISKEEMLHLFEFGDD 962
++ +KE++ LF D
Sbjct: 782 SEMRNKESSNDDLFNKEDLKDLFSVHTD 809
>sp|A6ZL17|RDH54_YEAS7 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain YJM789) GN=RDH54 PE=3 SV=1
Length = 924
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 172/628 (27%), Positives = 277/628 (44%), Gaps = 128/628 (20%)
Query: 383 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 427
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 428 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 472
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 473 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 525
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 526 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 585
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 586 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 643
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 544
Query: 644 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 702
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 599
Query: 703 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 762
PG+ +G P + K
Sbjct: 600 SPGL-----------------------------VGSDP---------------YYKSHIK 615
Query: 763 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 821
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 616 DTQSQDSYSRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 668
Query: 822 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 881
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 669 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 721
Query: 882 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 941
I+ D WNP+ DLQA+ R R GQ KP F YRL+ G ++EKI +RQ+ K L+ + +
Sbjct: 722 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781
Query: 942 QQVHR-------TISKEEMLHLFEFGDD 962
++ +KE++ LF D
Sbjct: 782 SEMRNKESSNDDLFNKEDLKDLFSVHTD 809
>sp|P38086|RDH54_YEAST DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RDH54 PE=1
SV=4
Length = 958
Score = 201 bits (511), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 172/628 (27%), Positives = 277/628 (44%), Gaps = 128/628 (20%)
Query: 383 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 427
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 296 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 355
Query: 428 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 472
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 356 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 411
Query: 473 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 525
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 412 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKL--LSVSEELEKNKHLI--- 466
Query: 526 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 585
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 467 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 518
Query: 586 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 643
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 519 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 578
Query: 644 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 702
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 579 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 633
Query: 703 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 762
PG+ +G P + K
Sbjct: 634 SPGL-----------------------------VGSDP---------------YYKSHIK 649
Query: 763 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 821
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 650 DTQSQDSYSRSLNSGKLKVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 702
Query: 822 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 881
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 703 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 755
Query: 882 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 941
I+ D WNP+ DLQA+ R R GQ KP F YRL+ G ++EKI +RQ+ K L+ + +
Sbjct: 756 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 815
Query: 942 QQVHR-------TISKEEMLHLFEFGDD 962
++ +KE++ LF D
Sbjct: 816 SEMRNKESSNDDLFNKEDLKDLFSVHTD 843
>sp|B5VE38|RDH54_YEAS6 DNA repair and recombination protein RDH54 OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=RDH54 PE=3 SV=1
Length = 924
Score = 201 bits (510), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 172/628 (27%), Positives = 277/628 (44%), Gaps = 128/628 (20%)
Query: 383 LKAHQVVGIRFMWENIIQSIRK--------------VKSGDKGL-GCILAHTMGLGKTFQ 427
L+ HQ G++FM++ ++ R V D + GC+LA MGLGKT
Sbjct: 262 LRPHQREGVKFMYDCLMGLARPTIENPDIDCTTKSLVLENDSDISGCLLADDMGLGKTLM 321
Query: 428 VIAFLYTAMRSVNLGLRTA---------------LIVTPVNVLHNWKQEFMKWRPSELKP 472
I ++T +R + + L+V PV ++ NWK+EF KW L
Sbjct: 322 SITLIWTLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKW----LNL 377
Query: 473 LRVFMLEDVSR-----DRRA-ELLAKWRAKGGVFLIGYTAFRNLSFGKHV-KDRNMAREI 525
R+ +L SR D+ A K + V +IGY LS + + K++++
Sbjct: 378 SRIGVLTLSSRNSPDMDKMAVRNFLKVQRIYQVLIIGYEKL--LSVSEELEKNKHLI--- 432
Query: 526 CHALQDGPDILVCDEAHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFV 585
D+LVCDE H +KN + LK + +R++ LTG+P+QN+L E++ ++DF+
Sbjct: 433 --------DMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFI 484
Query: 586 REGFLGSSHEFRNRFQNPIENGQHTNS--TSEDVKIMNQRSHILYEQLKGFVQRMDMNVV 643
G LGS F+ RF PI + T + E ++ +RS + E K F+ R ++
Sbjct: 485 NPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAIL 544
Query: 644 KKDLPPKTVFVITVKLSPLQRRLYKRFLDLHGFTNDRVSNEKIRKSFFAGY-QALAQIWN 702
+K LPPKT ++ K Q +K L R+ ++ S G L ++ N
Sbjct: 545 EKYLPPKTDIILFCKPYSQQILAFKDILQ-----GARLDFGQLTFSSSLGLITLLKKVCN 599
Query: 703 HPGILQLTKDKGYPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWN 762
PG+ +G P + K
Sbjct: 600 SPGL-----------------------------VGSDP---------------YYKSHIK 615
Query: 763 DLLHEHTYKELDYSGKMVLLLDILT-MCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 821
D + +Y SGK+ +L+ +L + +K +V S TLD+IE ++
Sbjct: 616 DTQSQDSYSRSLNSGKLRVLMTLLEGIRKGTKEKVVVVSNYTQTLDIIENLMN------- 668
Query: 822 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 881
G RLDG + +R +V FN N + L+S ++G +G+NL A+R+
Sbjct: 669 -----MAGMSHCRLDGSIPAKQRDSIVTSFNR--NPAIFGFLLSAKSGGVGLNLVGASRL 721
Query: 882 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 941
I+ D WNP+ DLQA+ R R GQ KP F YRL+ G ++EKI +RQ+ K L+ + +
Sbjct: 722 ILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGD 781
Query: 942 QQVHR-------TISKEEMLHLFEFGDD 962
++ +KE++ LF D
Sbjct: 782 SEMRNKESSNDDLFNKEDLKDLFSVHTD 809
>sp|P22082|SNF2_YEAST Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1
Length = 1703
Score = 200 bits (509), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 172/585 (29%), Positives = 263/585 (44%), Gaps = 102/585 (17%)
Query: 363 NVVREKGEEAVRIPSS-ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMG 421
NV E+ + PS + LK +Q+ G+++M V + L ILA MG
Sbjct: 746 NVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWM----------VSLFNNHLNGILADEMG 795
Query: 422 LGKTFQVIAFLYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDV 481
LGKT Q I+ L N+ L++ P++ L NW EF KW P+ LR +
Sbjct: 796 LGKTIQTISLLTYLYEMKNIR-GPYLVIVPLSTLSNWSSEFAKWAPT----LRTISFKGS 850
Query: 482 SRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREI--CHALQDGPDILVCD 539
+R+A+ AK RA G F + T F + +K+R + ++ H ++ D
Sbjct: 851 PNERKAKQ-AKIRA--GEFDVVLTTFEYI-----IKERALLSKVKWVH--------MIID 894
Query: 540 EAHMIKNTRADTTQALK-QVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRN 598
E H +KN ++ + L R+ LTG+PLQNNL E + +++FV S F
Sbjct: 895 EGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDE 954
Query: 599 RFQNPIEN--GQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVIT 656
F P N GQ SE+ ++ R L++ L+ F+ R V+K+LP K V+
Sbjct: 955 WFNTPFANTGGQDKIELSEEETLLVIRR--LHKVLRPFLLRRLKKDVEKELPDKVEKVVK 1012
Query: 657 VKLSPLQRRLYKRFLDLHGFTNDRVSNEKI--RKSFFAGYQALAQIWNHPGILQLTKDKG 714
K+S LQ+ +Y++ L +N+K+ + F L +I NHP + + +D+
Sbjct: 1013 CKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQI 1072
Query: 715 YPSREDAEDSSSDENMDYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELD 774
P+RE ND D W
Sbjct: 1073 NPTRE-----------------------TND-------------DIWR------------ 1084
Query: 775 YSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYR 834
+GK LL IL G + L+F Q +D++E +L + + R
Sbjct: 1085 VAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYI------------NIKYLR 1132
Query: 835 LDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDL 894
LDG T+S ER +L+ FN P ++ + C ++STRAG LG+NL +A+ VII D WNP DL
Sbjct: 1133 LDGHTKSDERSELLRLFNAPDSEYL-CFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDL 1191
Query: 895 QAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVV 939
QA RA R GQ V RL+ ++EE I +R K + +V+
Sbjct: 1192 QAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVI 1236
>sp|Q91ZW3|SMCA5_MOUSE SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Mus musculus
GN=Smarca5 PE=1 SV=1
Length = 1051
Score = 199 bits (506), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 177/591 (29%), Positives = 273/591 (46%), Gaps = 111/591 (18%)
Query: 376 PSSIS-AKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 434
PS + KL+ +QV G+ ++ + + G+ ILA MGLGKT Q I+ L
Sbjct: 171 PSYVKWGKLRDYQVRGLNWL----------ISLYENGINGILADEMGLGKTLQTISLLGY 220
Query: 435 AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLR-VFMLEDVSRDRRAELLAKW 493
N+ +++ P + LHNW EF KW P+ LR V ++ D +++RA +
Sbjct: 221 MKHYRNIP-GPHMVLVPKSTLHNWMSEFKKWVPT----LRSVCLIGD--KEQRAAFVR-- 271
Query: 494 RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 553
V L G S+ +K++++ ++ LV DEAH IKN ++ ++
Sbjct: 272 ----DVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRY------LVIDEAHRIKNEKSKLSE 321
Query: 554 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 613
+++ K R+ LTG+PLQNNL E + +++F+ S+ +F + F TN+
Sbjct: 322 IVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD--------TNNC 373
Query: 614 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 673
D K++ +R H++ L+ F+ R V+K LPPK I V LS +QR Y R L
Sbjct: 374 LGDQKLV-ERLHMV---LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-- 427
Query: 674 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 733
+ + I S AG ++ N ++QL K +P D + D +
Sbjct: 428 -------MKDIDILNS--AGKMDKMRLLNI--LMQLRKCCNHPYLFDGAEPGPPYTTDMH 476
Query: 734 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 793
+V SGKMV+L +L G
Sbjct: 477 LVTN--------------------------------------SGKMVVLDKLLPKLKEQG 498
Query: 794 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 853
+ L+FSQ LD++E Y +W+ ++ RLDG+T ERQ + +NE
Sbjct: 499 SRVLIFSQMTRVLDILEDYC-----------MWR-NYEYCRLDGQTPHDERQDSINAYNE 546
Query: 854 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYR 913
P N ++STRAG LGINL +A+ VI+ D WNP DLQA+ RA R GQTK V +R
Sbjct: 547 P-NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 605
Query: 914 LMAHGTMEEKIYKRQVTKEGLAARVVDR----QQVHRTISKEEMLHLFEFG 960
+ T+EE+I +R K L + V+ + Q I K+EML + G
Sbjct: 606 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHG 656
>sp|O60264|SMCA5_HUMAN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 OS=Homo sapiens
GN=SMARCA5 PE=1 SV=1
Length = 1052
Score = 198 bits (504), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 176/591 (29%), Positives = 273/591 (46%), Gaps = 111/591 (18%)
Query: 376 PSSIS-AKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 434
PS + KL+ +QV G+ ++ + + G+ ILA MGLGKT Q I+ L
Sbjct: 172 PSYVKWGKLRDYQVRGLNWL----------ISLYENGINGILADEMGLGKTLQTISLLGY 221
Query: 435 AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLR-VFMLEDVSRDRRAELLAKW 493
N+ +++ P + LHNW EF +W P+ LR V ++ D +++RA +
Sbjct: 222 MKHYRNIP-GPHMVLVPKSTLHNWMSEFKRWVPT----LRSVCLIGD--KEQRAAFVR-- 272
Query: 494 RAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQ 553
V L G S+ +K++++ ++ LV DEAH IKN ++ ++
Sbjct: 273 ----DVLLPGEWDVCVTSYEMLIKEKSVFKKFNWRY------LVIDEAHRIKNEKSKLSE 322
Query: 554 ALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNST 613
+++ K R+ LTG+PLQNNL E + +++F+ S+ +F + F TN+
Sbjct: 323 IVREFKTTNRLLLTGTPLQNNLHELWSLLNFLLPDVFNSADDFDSWFD--------TNNC 374
Query: 614 SEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDL 673
D K++ +R H++ L+ F+ R V+K LPPK I V LS +QR Y R L
Sbjct: 375 LGDQKLV-ERLHMV---LRPFLLRRIKADVEKSLPPKKEVKIYVGLSKMQREWYTRIL-- 428
Query: 674 HGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMDYN 733
+ + I S AG ++ N ++QL K +P D + D +
Sbjct: 429 -------MKDIDILNS--AGKMDKMRLLNI--LMQLRKCCNHPYLFDGAEPGPPYTTDMH 477
Query: 734 VVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSNMG 793
+V SGKMV+L +L G
Sbjct: 478 LVTN--------------------------------------SGKMVVLDKLLPKLKEQG 499
Query: 794 DKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERFNE 853
+ L+FSQ LD++E Y +W+ ++ RLDG+T ERQ + +NE
Sbjct: 500 SRVLIFSQMTRVLDILEDYC-----------MWR-NYEYCRLDGQTPHDERQDSINAYNE 547
Query: 854 PLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYR 913
P N ++STRAG LGINL +A+ VI+ D WNP DLQA+ RA R GQTK V +R
Sbjct: 548 P-NSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFR 606
Query: 914 LMAHGTMEEKIYKRQVTKEGLAARVVDR----QQVHRTISKEEMLHLFEFG 960
+ T+EE+I +R K L + V+ + Q I K+EML + G
Sbjct: 607 FITDNTVEERIVERAEMKLRLDSIVIQQGRLVDQNLNKIGKDEMLQMIRHG 657
>sp|Q08773|ISW2_YEAST ISWI chromatin-remodeling complex ATPase ISW2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ISW2 PE=1
SV=1
Length = 1120
Score = 197 bits (502), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 165/594 (27%), Positives = 272/594 (45%), Gaps = 114/594 (19%)
Query: 376 PSSI-SAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYT 434
PS + S KL+ +QV G+ ++ + + L ILA MGLGKT Q I+FL
Sbjct: 176 PSFVKSGKLRDYQVQGLNWL----------ISLHENKLSGILADEMGLGKTLQTISFL-G 224
Query: 435 AMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAK-- 492
+R V LI+ P + L NW++EF+KW P+ + V +L +D RA+++
Sbjct: 225 YLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPN----VNVLVLHG-DKDTRADIVRNII 279
Query: 493 WRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTT 552
A+ V + Y ++++N + + +V DEAH IKN ++ +
Sbjct: 280 LEARFDVLITSYEMV--------IREKNALKRLAWQY------IVIDEAHRIKNEQSALS 325
Query: 553 QALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIENGQHTNS 612
Q ++ + R+ +TG+PLQNNL E + +++F+ G S F F+ N+
Sbjct: 326 QIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQ--------NN 377
Query: 613 TSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFL- 671
+ +D +I+ Q+ H + L F+ R V+K L PK + V ++ +Q + YK L
Sbjct: 378 SEQDQEIVIQQLHSV---LNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLE 434
Query: 672 -DLHGFTNDRVSNEKIRKSFFAGYQALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENM 730
D+ N V + + L + NHP + + + G P ++DE++
Sbjct: 435 KDIDA-VNGAVGKREGKTRLLNIVMQLRKCCNHPYLFE-GAEPGPPY-------TTDEHL 485
Query: 731 DYNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCS 790
+N SGKM++L +L
Sbjct: 486 IFN------------------------------------------SGKMIILDKLLKRLK 503
Query: 791 NMGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVER 850
G + L+FSQ LD++E Y + + ++ R+DG T ER + ++
Sbjct: 504 EKGSRVLIFSQMSRLLDILEDYC------------YFRDFEYCRIDGSTSHEERIEAIDE 551
Query: 851 FNEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVF 910
+N+P N L++TRAG LGINL +A+ VI+ D WNP DLQA+ RA R GQ K V
Sbjct: 552 YNKP-NSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVH 610
Query: 911 AYRLMAHGTMEEKIYKRQVTKEGLAARVVDRQQVHRTI----SKEEMLHLFEFG 960
YR + +EEK+ +R K L V+ + +T SK+++L + +FG
Sbjct: 611 VYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFG 664
>sp|O43065|MOT1_SCHPO Probable helicase mot1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=mot1 PE=1 SV=4
Length = 1953
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 173/623 (27%), Positives = 274/623 (43%), Gaps = 102/623 (16%)
Query: 371 EAVRIPSSISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIA 430
EA IP ISA L+ +Q G+ N + + K + L IL MGLGKT Q I
Sbjct: 1346 EAFSIPVPISADLRKYQQEGV-----NWLAFLNKYE-----LHGILCDDMGLGKTLQTIC 1395
Query: 431 F----------LYTAMRSVNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLED 480
L+ S +LIV P + +W+QE + P L+V
Sbjct: 1396 IVASDHYNRQKLFEESGSPKFAHVPSLIVCPSTLAGHWQQELSTYAPF----LKVSAYVG 1451
Query: 481 VSRDRRAELLAKWRAKGGVFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDE 540
+R A++ +K + K V + Y RN ++ ++ + V DE
Sbjct: 1452 PPAER-AKIRSKMK-KSDVVVTSYDICRN--------------DVDELVKIDWNYCVLDE 1495
Query: 541 AHMIKNTRADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRF 600
H+IKN RA T+A+K ++ R+ L+G+P+QNN++E + + DF+ GFLG+ F+ RF
Sbjct: 1496 GHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEKTFQERF 1555
Query: 601 QNPIENGQHTNSTSEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLS 660
PI + S+S++ + +++Q+ F+ R V DLPPK + +S
Sbjct: 1556 VRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADLPPKIIQDYYCDMS 1615
Query: 661 PLQRRLYKRFL-------DLHGFTNDRVSNEKIRKS----FFAGYQALAQIWNHPGILQL 709
LQR+L F+ +L ++ + +KS F Q + ++ NHP ++
Sbjct: 1616 DLQRKLLNDFVSQLNINEELEDDETEKTQGTRKKKSQKAHIFQALQYMRKLCNHPALILT 1675
Query: 710 TKDKGYPSREDAEDSSSDENMDYN--------VVIGEKPRNMNDFLQGKNDDGFFQKDWW 761
K +P R + EN + +G+ R+ N +G
Sbjct: 1676 EK---HPKRNAIVKQLAKENSGLHDLKHAPKLTALGQLLRDCGLGNSSVNSNGI--DSAL 1730
Query: 762 NDLLHEHTYKELDYSGKMVLLLDILTMCSNMGDKSLVFSQSIPTLDLIEFYLSKLPRPGK 821
+ + EH + L+F Q LD++E L + P
Sbjct: 1731 TNAVSEH--------------------------RVLIFCQLKDMLDMVEKDLLQATMPDV 1764
Query: 822 QGKLWKKGKDWYRLDGRTESSERQKLVERFNEPLNKRVKCTLISTRAGSLGINLHSANRV 881
+ RLDG E ++RQ+ V +FN + + L++T G LG+NL A+ V
Sbjct: 1765 T---------YMRLDGSVEPTKRQEAVTKFNN--DPSIDVLLLTTHVGGLGLNLTGADTV 1813
Query: 882 IIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHGTMEEKIYKRQVTKEGLAARVVDR 941
I V+ WNP DLQA+ RA R GQ K V YRL+ G +EEKI Q K +A+ VV++
Sbjct: 1814 IFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKIMGLQRFKMNVASTVVNQ 1873
Query: 942 QQVH-RTISKEEMLHLFEFGDDE 963
Q +I +++L LF DE
Sbjct: 1874 QNAGLSSIGTDQILDLFNTTADE 1896
>sp|Q9UTN6|SNF21_SCHPO Chromatin structure-remodeling complex subunit snf21
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=snf21 PE=1 SV=1
Length = 1199
Score = 190 bits (483), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 170/568 (29%), Positives = 252/568 (44%), Gaps = 102/568 (17%)
Query: 379 ISAKLKAHQVVGIRFMWENIIQSIRKVKSGDKGLGCILAHTMGLGKTFQVIAFLYTAMRS 438
+ KLK +Q+ G+++M + + L ILA MGLGKT Q I+ L T +
Sbjct: 413 VGGKLKEYQLRGLQWM----------ISLYNNHLNGILADEMGLGKTIQTIS-LITHLIE 461
Query: 439 VNLGLRTALIVTPVNVLHNWKQEFMKWRPSELKPLRVFMLEDVSRDRRAELLAKWRAKGG 498
L++ P++ L NW EF +W PS +K + + + R+A +
Sbjct: 462 KKRQNGPFLVIVPLSTLTNWTMEFERWAPSIVK----IVYKGPPQVRKALHPQVRHSNFQ 517
Query: 499 VFLIGYTAFRNLSFGKHVKDRNMAREICHALQDGPDILVCDEAHMIKNTRADTTQALKQV 558
V L Y +KDR + I ++ DE H +KNT++ T L
Sbjct: 518 VLLTTYEYI--------IKDRPLLSRIKWI------YMIIDEGHRMKNTQSKLTNTLTTY 563
Query: 559 KCQR-RIALTGSPLQNNLMEYYCMVDFVREGFLGSSHEFRNRFQNPIEN--GQHTNSTSE 615
R R+ LTG+PLQNNL E + +++FV S F F P N GQ +E
Sbjct: 564 YSSRYRLILTGTPLQNNLPELWALLNFVLPRIFNSIKSFDEWFNTPFANTGGQDKMELTE 623
Query: 616 DVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVITVKLSPLQRRLYKRFLDLHG 675
+ ++ R L++ L+ F+ R V+ +LP K VI ++S LQ++LY + + HG
Sbjct: 624 EESLLVIRR--LHKVLRPFLLRRLKKDVEAELPDKVEKVIRCQMSGLQQKLYYQ-MKKHG 680
Query: 676 FTNDRVSNEKIRKSFFAGYQ----ALAQIWNHPGILQLTKDKGYPSREDAEDSSSDENMD 731
V + K K+ G Q L +I NHP + ED E S +
Sbjct: 681 MLY--VEDAKRGKTGIKGLQNTVMQLKKICNHPFVF-----------EDVERSIDPTGFN 727
Query: 732 YNVVIGEKPRNMNDFLQGKNDDGFFQKDWWNDLLHEHTYKELDYSGKMVLLLDILTMCSN 791
Y+++ W SGK LL IL
Sbjct: 728 YDML-------------------------WR------------VSGKFELLDRILPKLFR 750
Query: 792 MGDKSLVFSQSIPTLDLIEFYLSKLPRPGKQGKLWKKGKDWYRLDGRTESSERQKLVERF 851
G + L+F Q ++++E YL + W+ + RLDG T++ +R KL+ F
Sbjct: 751 SGHRILMFFQMTQIMNIMEDYL--------HYRQWR----YLRLDGSTKADDRSKLLGVF 798
Query: 852 NEPLNKRVKCTLISTRAGSLGINLHSANRVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFA 911
N+P V L+STRAG LG+NL +A+ VII D WNP DLQA RA R GQTK V
Sbjct: 799 NDP-TAEVNLFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRI 857
Query: 912 YRLMAHGTMEEKIYKRQVTKEGLAARVV 939
YRL+ ++EE I R K + +V+
Sbjct: 858 YRLITEKSVEENILARAQYKLDIDGKVI 885
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 421,823,421
Number of Sequences: 539616
Number of extensions: 18253061
Number of successful extensions: 63738
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 137
Number of HSP's that attempted gapping in prelim test: 61618
Number of HSP's gapped (non-prelim): 1319
length of query: 1138
length of database: 191,569,459
effective HSP length: 128
effective length of query: 1010
effective length of database: 122,498,611
effective search space: 123723597110
effective search space used: 123723597110
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)